Your job contains 1 sequence.
>psy5649
MDYALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFR
LKAAFDAALDHAPSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAV
TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG
FVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDI
GGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNF
ISVKI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5649
(305 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 616 3.9e-60 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 360 1.5e-58 3
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 587 4.6e-57 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 586 5.9e-57 1
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 585 7.5e-57 1
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 586 7.6e-57 1
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 586 1.7e-56 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 585 2.3e-56 1
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 324 3.3e-56 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 583 3.8e-56 1
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 536 2.9e-51 1
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 491 2.4e-46 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 476 9.6e-45 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 456 2.1e-42 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 456 2.2e-42 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 456 2.2e-42 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 455 2.5e-42 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 453 4.2e-42 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 449 1.1e-41 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 449 1.1e-41 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 448 1.5e-41 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 446 2.4e-41 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 446 2.4e-41 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 446 2.4e-41 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 446 2.4e-41 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 446 2.4e-41 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 446 2.5e-41 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 446 2.6e-41 1
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 444 2.9e-41 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 445 3.3e-41 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 444 4.0e-41 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 444 4.1e-41 1
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 436 4.6e-41 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 443 5.3e-41 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 443 5.6e-41 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 440 1.2e-40 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 440 1.2e-40 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 437 2.2e-40 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 432 8.3e-40 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 432 8.3e-40 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 431 1.0e-39 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 429 1.9e-39 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 428 2.2e-39 1
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 244 3.2e-39 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 232 2.9e-38 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 232 2.9e-38 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 415 5.7e-38 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 415 5.7e-38 1
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc... 413 7.9e-38 1
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 253 1.3e-37 2
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 248 1.4e-37 2
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 408 2.5e-37 1
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 407 3.3e-37 1
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 248 3.4e-37 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 251 4.1e-37 2
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 375 4.2e-37 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 248 5.7e-37 2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 245 8.4e-37 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 245 8.4e-37 2
UNIPROTKB|E2QSC5 - symbol:SPATA5L1 "Uncharacterized prote... 402 1.1e-36 1
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 245 1.2e-36 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 245 1.2e-36 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 234 1.2e-36 3
UNIPROTKB|F6UUI0 - symbol:SPATA5L1 "Uncharacterized prote... 402 1.4e-36 1
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 401 1.4e-36 1
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 245 1.5e-36 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 231 1.7e-36 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 244 5.2e-36 2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 233 6.9e-36 2
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 382 2.4e-35 1
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 388 3.9e-35 1
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 235 9.1e-35 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 248 2.3e-34 2
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 229 7.0e-34 2
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 243 2.2e-33 3
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 243 2.2e-33 3
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 369 5.4e-33 1
DICTYBASE|DDB_G0272777 - symbol:DDB_G0272777 "AAA ATPase ... 239 2.7e-31 3
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 249 4.8e-31 2
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet... 241 6.7e-30 3
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p... 241 6.7e-30 3
UNIPROTKB|P96281 - symbol:Rv0435c "Transitional endoplasm... 314 6.9e-30 2
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 200 3.2e-28 2
UNIPROTKB|G4N5K9 - symbol:MGG_13203 "ATPase" species:2425... 224 9.0e-25 3
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 287 5.0e-24 1
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 282 1.7e-23 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 271 8.6e-23 1
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 273 1.6e-22 1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 273 1.6e-22 1
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 273 1.6e-22 1
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 210 4.5e-22 3
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 267 6.8e-22 1
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 246 7.6e-22 2
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 264 1.5e-21 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 219 4.2e-21 2
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica... 231 8.1e-21 2
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen... 231 8.1e-21 2
DICTYBASE|DDB_G0282215 - symbol:DDB_G0282215 "AAA ATPase ... 248 2.3e-20 1
DICTYBASE|DDB_G0268066 - symbol:DDB_G0268066 "putative AT... 213 3.0e-20 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 244 1.2e-19 1
WARNING: Descriptions of 536 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 129/314 (41%), Positives = 191/314 (60%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + H VI ++ SKFYGE+E RL+ F
Sbjct: 345 KSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIF 404
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAVT 121
C R +++ E+R+++ L+T +D + + +V+L T
Sbjct: 405 AEASLRRPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGAT 464
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ +P+ R IL LL KVPHSL+ ++ Q+A HG+
Sbjct: 465 NRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGY 524
Query: 182 VGGDXXXXXXXXXXXXX----------VETEGTGQVL-SYDGVMRALDHVKPSAMRQVLV 230
VG D +TE G V+ +++ ++ + V+PSAMR+V V
Sbjct: 525 VGADLAALCKEAGLYALRRALGKRAHPSDTEVAGSVMIAFNDFLQGMKDVRPSAMREVAV 584
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+VP V WSDIGG ++VKLKL+Q+VEWPLKHP++F R+GI+PP+G+L++GPPGCSKTMIAK
Sbjct: 585 DVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAK 644
Query: 291 ALATESKLNFISVK 304
ALA ES LNF++VK
Sbjct: 645 ALAHESGLNFLAVK 658
Score = 167 (63.8 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V + IGG +R++VE PLK E F GI PPRG+L++GPPG KT+IAKA+
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 293 ATE 295
A E
Sbjct: 373 ANE 375
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 360 (131.8 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 62/97 (63%), Positives = 86/97 (88%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
LS + ++ AL+ VKPS+MR+V+VE+P V W DIGGQ+ +K KL++++EWPLK+P++F R+
Sbjct: 592 LSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRM 651
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
GIKPP+GIL++GPPGCSKT++AKALATES LNFI+VK
Sbjct: 652 GIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVK 688
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 55/223 (24%), Positives = 101/223 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG G KT L +LA+ ++ + ++ ++ SK+ GE+E ++ F
Sbjct: 652 GIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKA 711
Query: 69 XXXXXXXXXXXXXXXXCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R+ S R++S L+T++D + L V ++ T D
Sbjct: 712 RQNSPSILFFDEIDGLAISRSGEGSGAVERVVSQLLTEMDGIQPLTN-VTIIGATNRPDI 770
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDX 186
+D ++ GR+D+ + + P D R I + L KVPHS D I Q++ +T G+ G +
Sbjct: 771 IDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDID-INQLSILTDGYSGAEV 829
Query: 187 XXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVL 229
E ++ + + A+ +VK +++L
Sbjct: 830 TSICREASIAAMKEDINAKEI-NMSHFISAIGNVKKGITQEML 871
Score = 168 (64.2 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQV 174
V+++ T D++D +LR PGR D EIE+ +P++ R IL+ L+K+P+ L++ +I +
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528
Query: 175 AFITHGFVGGD 185
A THGFVG D
Sbjct: 529 ASKTHGFVGAD 539
Score = 133 (51.9 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L+S G+K GIL+YG GTGKT L +A+ I AD+ KFYG E L+
Sbjct: 338 LKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKI 397
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVD 106
F C R N S+ E+R++ L+T +D
Sbjct: 398 FKDAAQKSPSIIFIDELDALCPKREDNSSEVEKRIVGSLLTLMD 441
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 234 NVKWSDIGGQD-EVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
N+ + IGG D +VK ++R+ ++ + G+KPP+GIL++GPPG KT++A+ +
Sbjct: 308 NLNFQSIGGLDLQVK-QIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIV 366
Query: 293 ATESKLNFISV 303
AT++ ++
Sbjct: 367 ATQTNATLFTI 377
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 129/320 (40%), Positives = 186/320 (58%)
Query: 1 MDYALQSN----GMKKCNGILIYGVNGTGKTSLIHSLAS----HMKVHTVVIQV--ADMF 50
M+YAL G++ G+L+YG G GK+ ++ ++ + + H +I++ +++
Sbjct: 288 MEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVY 347
Query: 51 SKFYGEAEFRLKAAFXXXXXXXX--XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRL 108
SKF GE E +L A F C + SD +R+ ++ +D+L
Sbjct: 348 SKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDLVKRVSLAFLSLLDQL 407
Query: 109 H---ELQAC-VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPH 164
+L+ +LA ++ +D + S+R GRLD E+EL PS R I+ CL+ V H
Sbjct: 408 SSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEH 467
Query: 165 SLSTDQIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSA 224
LS ++++ VA ITHG+VG D + L + AL +KPSA
Sbjct: 468 QLSDEEVEHVASITHGYVGADLANLVYAAML------QAQPNPLQMPHLQAALTRIKPSA 521
Query: 225 MRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCS 284
MR+VL+E PNV+WSDIGGQ E++L ++Q++EWPL H + F RLGIKPPRGILMFGPPGCS
Sbjct: 522 MREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCS 581
Query: 285 KTMIAKALATESKLNFISVK 304
KTMIAKALATESKLNF+S+K
Sbjct: 582 KTMIAKALATESKLNFLSIK 601
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+K GIL++G G KT + +LA+ K++ + I+ ++FS + GE+E ++ F
Sbjct: 562 QRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVF 621
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRSDQ-------ERRLLSCLVTQVDRLHELQACVVLL 118
R+ D + R+L+ L+T++D + LQ V ++
Sbjct: 622 RKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQN-VTIV 680
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
A T D +D +L PGR+D+ + + +P + R IL L +P S D ++++ +T
Sbjct: 681 AATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVD-MEKLVQLT 739
Query: 179 HGFVGGD 185
G+ G +
Sbjct: 740 EGYSGAE 746
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 124/314 (39%), Positives = 188/314 (59%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E RL+ F
Sbjct: 371 KSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 430
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAVT 121
C R +++ E+R+++ L+T +D + + V++L T
Sbjct: 431 AEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGAT 490
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ VP+ R IL LL +VPH L+ ++ Q+A HG+
Sbjct: 491 NRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGY 550
Query: 182 VGGDXXXXXXXXXXXXX----------VETEGTGQV-LSYDGVMRALDHVKPSAMRQVLV 230
VG D +++ G V ++ ++ ++ ++PSAMR+V V
Sbjct: 551 VGADLKALCNEAGLHALRRVLRRQPNLPDSKMAGLVKITLKDFLQGMNDIRPSAMREVAV 610
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+VPNV WSDIGG + VKLKL+Q+VEWPLKHPE+F ++GI+PP+G+L++GPPGCSKTMIAK
Sbjct: 611 DVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAK 670
Query: 291 ALATESKLNFISVK 304
ALA ES LNF+++K
Sbjct: 671 ALANESGLNFLAIK 684
Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG + ++R+ +E PLK PE F GI PPRG+L++GPPG KTMIA+A+A
Sbjct: 341 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 295 E 295
E
Sbjct: 401 E 401
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 122/314 (38%), Positives = 188/314 (59%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E RL+ F
Sbjct: 374 KSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 433
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAVT 121
C R +++ E+R+++ L+T +D + + V++L T
Sbjct: 434 AEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGAT 493
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ VP+ R IL LL +VPH L+ ++ Q+A HG+
Sbjct: 494 NRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGY 553
Query: 182 VGGDXXXXXXXXXXXXX----------VETEGTGQV-LSYDGVMRALDHVKPSAMRQVLV 230
VG D +++ G V ++ ++ ++ ++PSAMR+V +
Sbjct: 554 VGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGLVKITLKDFLQGMNDIRPSAMREVAI 613
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+VPNV WSDIGG + +KLKL+Q+VEWPLKHPE+F ++GI+PP+G+L++GPPGCSKTMIAK
Sbjct: 614 DVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAK 673
Query: 291 ALATESKLNFISVK 304
ALA ES LNF+++K
Sbjct: 674 ALANESGLNFLAIK 687
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG + ++R+ +E PLK PE F GI PPRG+L++GPPG KTMIA+A+A
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 295 E 295
E
Sbjct: 404 E 404
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 586 (211.3 bits), Expect = 7.6e-57, P = 7.6e-57
Identities = 121/314 (38%), Positives = 190/314 (60%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E RL+ F
Sbjct: 380 KSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAVT 121
C R +S+ E+R+++ L+T +D + + V++L T
Sbjct: 440 AEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGAT 499
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ +P+ R IL LL +VPH L+ ++ ++A HG+
Sbjct: 500 NRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGY 559
Query: 182 VGGDXXXXXXXXXXXXX----------VETEGTGQV-LSYDGVMRALDHVKPSAMRQVLV 230
VG D +++ G V ++ + ++ ++ ++PSAMR+V +
Sbjct: 560 VGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAI 619
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+VPNV WSDIGG + +KLKL+Q+VEWPLKHP++F+R+GI+PP+G+L++GPPGCSKTMIAK
Sbjct: 620 DVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAK 679
Query: 291 ALATESKLNFISVK 304
ALA ES LNF+++K
Sbjct: 680 ALANESGLNFLAIK 693
Score = 154 (59.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG + +R+ +E PLK PE F GI PRG+L++GPPG KTMIA+A+A
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 295 E 295
E
Sbjct: 410 E 410
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 586 (211.3 bits), Expect = 1.7e-56, P = 1.7e-56
Identities = 123/314 (39%), Positives = 189/314 (60%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E RL+ F
Sbjct: 380 KSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAVT 121
C R +++ E+R+++ L+T +D + + V++L T
Sbjct: 440 AEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGAT 499
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ VP+ R IL LL +VPH L+ ++ Q+A HG+
Sbjct: 500 NRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGY 559
Query: 182 VGGDXXXXXXXXXXXXX----------VETEGTGQV-LSYDGVMRALDHVKPSAMRQVLV 230
VG D +++ G V ++ + ++ ++ ++PSAMR+V +
Sbjct: 560 VGADLKALCNEAGLYALRRVLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVAI 619
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+VPNV WSDIGG + +KLKL+Q+VEWPLKHPE+F R+GI+PP+G+L++GPPGCSKTMIAK
Sbjct: 620 DVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAK 679
Query: 291 ALATESKLNFISVK 304
ALA ES LNF+++K
Sbjct: 680 ALANESGLNFLAIK 693
Score = 171 (65.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 47/182 (25%), Positives = 89/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG G KT + +LA+ ++ + I+ ++ +K+ GE+E ++ F
Sbjct: 657 GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKA 716
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R S + R+L+ L+T++D + +L+ V +LA T
Sbjct: 717 RAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKD-VTILAATNRP 775
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVG 183
D +D +L PGR+D+ I +P+P R IL+ +P +S D + ++ F T + G
Sbjct: 776 DRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMP--ISNDVNLDELIFQTDTYSG 833
Query: 184 GD 185
+
Sbjct: 834 AE 835
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG +R+ +E PLK PE F GI PPRG+L++GPPG KTMIA+A+A
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 295 E 295
E
Sbjct: 410 E 410
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 585 (211.0 bits), Expect = 2.3e-56, P = 2.3e-56
Identities = 124/315 (39%), Positives = 189/315 (60%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E +L+ F
Sbjct: 380 KSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIF 439
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRL-HEL-QACVVLLAVT 121
C R +++ E+R+++ L+T +D + E+ + V++L T
Sbjct: 440 AEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGAT 499
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ VP+ R IL LL +VPH L+ ++ Q+A HG+
Sbjct: 500 NRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGY 559
Query: 182 VGGDXXXXXXXXXXXXX------------VETEGTGQVLSYDGVMRALDHVKPSAMRQVL 229
VG D V+ G ++ D ++A++ ++PSAMR++
Sbjct: 560 VGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKD-FLQAMNDIRPSAMREIA 618
Query: 230 VEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIA 289
++VPNV WSDIGG + +KLKL Q+VEWPLKHPE+F R+GI+PP+G+L++GPPGCSKTMIA
Sbjct: 619 IDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIA 678
Query: 290 KALATESKLNFISVK 304
KALA ES LNF+++K
Sbjct: 679 KALANESGLNFLAIK 693
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG G KT + +LA+ ++ + I+ ++ +K+ GE+E ++ F
Sbjct: 657 GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKA 716
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R S + R+L+ L+T++D + +L+ V +LA T
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKD-VTILAATNRP 775
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGR+D+ I +P+P R I +P S D + ++ T + G
Sbjct: 776 DRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVD-LDELILQTDAYSGA 834
Query: 185 D 185
+
Sbjct: 835 E 835
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG +R+ +E PLK PE F GI PRG+L++GPPG KTMIA+A+A
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 295 E 295
E
Sbjct: 410 E 410
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 324 (119.1 bits), Expect = 3.3e-56, Sum P(2) = 3.3e-56
Identities = 55/97 (56%), Positives = 79/97 (81%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
+ ++ A ++PSAMR+V++EVP V W D+GGQ+EVK +L ++VEWP KH +AF R+
Sbjct: 694 VGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRI 753
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
G +PP GILMFGPPGCSKT++A+A+A+E+KLNF++VK
Sbjct: 754 GTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVK 790
Score = 296 (109.3 bits), Expect = 3.3e-56, Sum P(2) = 3.3e-56
Identities = 66/184 (35%), Positives = 101/184 (54%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
+L S G++ G+LI+G GTGKTSL + A H V+ + ++ S++ GE+E L
Sbjct: 409 SLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDE 468
Query: 64 AFXXXXXXXXXXXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVT 121
F R +E +R+++ L+ +D + VV++A T
Sbjct: 469 VFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDG-VVVIAAT 527
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
D+++ +LR PGRLD+EIE+ VPS QR+ ILH +L + HSLS Q++Q+A THGF
Sbjct: 528 NRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGF 587
Query: 182 VGGD 185
VG D
Sbjct: 588 VGAD 591
Score = 201 (75.8 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 52/186 (27%), Positives = 96/186 (51%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
A + G + +GIL++G G KT + ++AS K++ + ++ ++FSK+ GE+E +++
Sbjct: 749 AFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRS 808
Query: 64 AFXXXXXXXXXXXXXXXXXXXCTGRNRSDQ----ERRLLSCLVTQVDRLHELQACVVLLA 119
F + R + + R++S L+ ++D LH+ + V ++A
Sbjct: 809 LFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQ-RVGVTVIA 867
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGR D+ + + P+ R AIL L K+P S S ++++A IT
Sbjct: 868 ATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCS-SDICLKELASITK 926
Query: 180 GFVGGD 185
G+ G D
Sbjct: 927 GYTGAD 932
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 583 (210.3 bits), Expect = 3.8e-56, P = 3.8e-56
Identities = 121/314 (38%), Positives = 189/314 (60%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E RL+ F
Sbjct: 380 KSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAVT 121
C R +S+ E+R+++ L+T +D + + V++L T
Sbjct: 440 AEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGAT 499
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
+D +LR PGR D+EIE+ +P+ R IL LL +VPH L+ ++ ++A HG+
Sbjct: 500 NRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGY 559
Query: 182 VGGDXXXXXXXXXXXXX----------VETEGTGQV-LSYDGVMRALDHVKPSAMRQVLV 230
VG D +++ G V ++ + ++ ++ ++PSAMR+V +
Sbjct: 560 VGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAI 619
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+VPNV WSDIGG + +KLKL+Q+VEWPLKHP++F R+GI+PP+G+L++GPPGCSKTMIAK
Sbjct: 620 DVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAK 679
Query: 291 ALATESKLNFISVK 304
ALA ES LNF+++K
Sbjct: 680 ALANESGLNFLAIK 693
Score = 169 (64.5 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 46/181 (25%), Positives = 87/181 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG G KT + +LA+ ++ + I+ ++ +K+ GE+E ++ F
Sbjct: 657 GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKA 716
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R S + R+L+ L+T++D + +L+ V +LA T
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKN-VTVLAATNRP 775
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGR+D+ I +P+P R IL+ +P S D + ++ T + G
Sbjct: 776 DRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVD-LDELVLQTDTYSGA 834
Query: 185 D 185
+
Sbjct: 835 E 835
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG + +R+ +E PLK PE F GI PRG+L++GPPG KTMIA+A+A
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 295 E 295
E
Sbjct: 410 E 410
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 536 (193.7 bits), Expect = 2.9e-51, P = 2.9e-51
Identities = 115/301 (38%), Positives = 173/301 (57%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT ++ ++A+ I + K+ GE E RL+ F
Sbjct: 315 GVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPS 374
Query: 75 XXXXXXXXXXCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
R S+ E R ++ L+T +D + VV++A T +++D +LR
Sbjct: 375 IIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGK-VVVIAATNRPNSIDEALR 433
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXX 192
PGRL++EIE+ +P + R I+ LL+ VP+ ++ Q++ +A TH +VG D
Sbjct: 434 RPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVRE 493
Query: 193 XXXXXXVET-----EGTGQ----VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQ 243
T + +G + D + AL V+ SAMR+ ++E PNV WSDIGGQ
Sbjct: 494 AALRAIKRTISLQKDTSGLDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQ 553
Query: 244 DEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+EVK KL++SVEWPL H E F+RLG++PP+G+L++GPPGCSKT+ AKA+ATE+ LNFI+V
Sbjct: 554 EEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAV 613
Query: 304 K 304
K
Sbjct: 614 K 614
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 42/177 (23%), Positives = 83/177 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG G KT ++A+ ++ + ++ ++F KF GE+E ++ F
Sbjct: 578 GVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKA 637
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVD 128
R + R+++ L+ ++D + L+ V++LA T D +D
Sbjct: 638 RQASPSVIFFDEIDALTANRGEDNSSDRVVAALLNELDGIEALRN-VLVLAATNRPDMID 696
Query: 129 VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+L PGRLD+ + + P+ + R I+ K+ + D + +A T G G +
Sbjct: 697 PALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVD-LDLIAEKTEGCSGAE 752
Score = 151 (58.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V +S IGG ++R VE P ++PE F I PPRG+L++GPPG KTM+ +A+A
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 295 ESKLNFISV 303
E+ ++
Sbjct: 336 EANAQVFTI 344
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 491 (177.9 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 113/311 (36%), Positives = 170/311 (54%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G+ GIL++G GTGKT L+ +A+ H + I + SK+ GE E L+ F
Sbjct: 273 SFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFN 332
Query: 67 XXXXXXXXXXXXXXXXXXCTGRNRSDQ---ERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R D E R+++ L+T +D + VV++A T
Sbjct: 333 EARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGK-VVVIAATNR 391
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVP---HSLSTDQIQQVAFITHG 180
++VD +LR PGR DQE+E+ +P D R IL +++ H L ++ I+ +A THG
Sbjct: 392 PNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHG 451
Query: 181 FVGGDXXXXXXXXXXXXXVETEGTGQVL-------SYDGVMRALDHVKPSAMRQVLVEVP 233
+VG D GT + + V A+ ++PSAMR++ +E+P
Sbjct: 452 YVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMP 511
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
V WSDIGGQ+E+K K+++ ++ PL+ E FARLGI P+G+L++GPPGCSKT+ AKALA
Sbjct: 512 KVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALA 571
Query: 294 TESKLNFISVK 304
TES +NF++VK
Sbjct: 572 TESGINFLAVK 582
Score = 173 (66.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G KT +LA+ ++ + ++ ++F+K+ GE+E ++ F
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R+ S +L+ L+ ++D + EL+ VV++A T D
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKG-VVIVAATNRPDE 664
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+D +L PGRLD+ I + P + R IL K S + ++A T G+ G +
Sbjct: 665 IDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAE 723
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
+ ++ +GG D+ L+ ++E PL P F+ G+ PPRGIL+ GPPG KTM+ + +A
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
Query: 295 ESKLNFISV 303
S + +++
Sbjct: 302 TSNAHVLTI 310
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 476 (172.6 bits), Expect = 9.6e-45, P = 9.6e-45
Identities = 108/308 (35%), Positives = 169/308 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHM-KVHTVVIQVADMFSKFYGEAEFRLKAAFXX 67
G+ GIL++G GTGKT L+ +A+ + + H + I + SK+ GE E ++ F
Sbjct: 259 GISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNE 318
Query: 68 XXXXXXXXXXXXXXXXXCTGRNRSDQ---ERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R D E R+++ L+T +D + + +V++ T
Sbjct: 319 AKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQLLTVMDGMGD-NGRIVVIGATNRP 377
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHS---LSTDQIQQVAFITHGF 181
+++D +LR PGR DQE+E+ +P + R IL K+ ++ ++I +A THG+
Sbjct: 378 NSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGY 437
Query: 182 VGGDXXXXXXXXXXXXXVE--TEGTGQV---LSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
VG D T G Q ++ D V AL ++PSAMR++ +E+P V
Sbjct: 438 VGADLTALCRESVMKAINRGLTVGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVH 497
Query: 237 WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
WSDIGGQ+E+K KL + V+ PL+ ++F LG+ P+G+L++GPPGCSKT+ AKALATES
Sbjct: 498 WSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATES 557
Query: 297 KLNFISVK 304
LNF++VK
Sbjct: 558 GLNFLAVK 565
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/183 (25%), Positives = 85/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G KT +LA+ ++ + ++ ++F+K+ GE+E ++ F
Sbjct: 529 GVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKA 588
Query: 69 XXXXXXXXXXXXXXXXC---TGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
G + + +L+ L+ ++D + EL+ VV++ T
Sbjct: 589 RAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKG-VVIVGATNKPT 647
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQ---IQQVAFITHGFV 182
+D +L PGRLD+ I + P D R IL K + S D+ +Q++A +T G
Sbjct: 648 EIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKF-NLQSGDESVDLQKLAELTDGCS 706
Query: 183 GGD 185
G +
Sbjct: 707 GAE 709
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 235 VKWSDIGG-QDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
+ + +GG +++L L+ ++E PL +P F+ GI PPRGIL+ GPPG KTM+ + +A
Sbjct: 226 ITYDQVGGLSKQIEL-LKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 284
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 456 (165.6 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 117/317 (36%), Positives = 172/317 (54%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K G+L+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 249 KSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 308
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R ++ + ERR++S L+T +D + + ++ VV++A T
Sbjct: 309 EEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGM-KARSNVVVMAATNR 367
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+E+++ +P R IL + TK L D ++Q+A THG+V
Sbjct: 368 PNSIDPALRRFGRFDREVDIGIPDPTGRLEILQ-IHTK-NMKLGDDVDLEQIAAETHGYV 425
Query: 183 GGDXXXXXXXXXXXXXVET-------EGT--GQVLSYDGVMR-----ALDHVKPSAMRQV 228
G D E E T +VL GV AL PSA+R+V
Sbjct: 426 GSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREV 485
Query: 229 -LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
+VEVPNV+W DIGG DEVK LR+ V++P+ HPE F + G+ P RG+L +GPPG KTM
Sbjct: 486 AVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTM 545
Query: 288 IAKALATESKLNFISVK 304
+AKA+A E NFISVK
Sbjct: 546 LAKAVANECAANFISVK 562
Score = 186 (70.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 51/182 (28%), Positives = 86/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L YG GTGKT L ++A+ + + ++ ++ S ++GE+E ++ F
Sbjct: 526 GLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKA 585
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
R S + R+++ L+T++D + + V ++ T
Sbjct: 586 RAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKN-VFVIGATNR 644
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
+ +D +L PGRLD I +P+P R +IL L K P S D +Q +A THGF G
Sbjct: 645 PEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVD-LQYIANKTHGFSG 703
Query: 184 GD 185
D
Sbjct: 704 AD 705
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPPRG+L++GPPG KT++A+A+A
Sbjct: 219 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 279 ETGAFFFLI 287
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 456 (165.6 bits), Expect = 2.2e-42, P = 2.2e-42
Identities = 111/313 (35%), Positives = 171/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG G+GKT + ++A+ +I ++ SK GEAE L+ AF
Sbjct: 237 GVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEA 296
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D + + VV++A T ++
Sbjct: 297 EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGIKS-RGQVVVIAATNRQNS 355
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ VP + R IL + TK LS D +++++A THGFVG D
Sbjct: 356 IDPALRRFGRFDREIDIGVPDDNGRFEILR-IHTK-NMKLSPDVKLEELASNTHGFVGAD 413
Query: 186 XXXXXXXXXXX------XXVETEGT---GQVL-----SYDGVMRALDHVKPSAMRQVLVE 231
++ E +VL + D AL PS++R+ +VE
Sbjct: 414 LAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVE 473
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VPNVKW DIGG DEVK LR+ + +P+ HP+ F + G+ P RG+L +GPPGC KT++AKA
Sbjct: 474 VPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKA 533
Query: 292 LATESKLNFISVK 304
+A+E NF+S+K
Sbjct: 534 VASECSANFVSIK 546
Score = 177 (67.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
++ + + DIGG + ++R+ +E PL+HP F LG+KPPRG+L++GPPG KT IA+
Sbjct: 200 KLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIAR 259
Query: 291 ALATESKLNFISV 303
A+A E+ F +
Sbjct: 260 AVANETGAFFFLI 272
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/182 (28%), Positives = 85/182 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++AS + V I+ ++ + ++GE+E ++ F
Sbjct: 510 GMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKA 569
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S D R+++ L+T++D + + + + T
Sbjct: 570 RAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKN-LFFIGATNR 628
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
+ +D +L PGRLDQ I +P+P R +IL +L K P + + I +A T GF G
Sbjct: 629 PELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVP-IDFLAQKTAGFSG 687
Query: 184 GD 185
D
Sbjct: 688 AD 689
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 456 (165.6 bits), Expect = 2.2e-42, P = 2.2e-42
Identities = 111/313 (35%), Positives = 171/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG G+GKT + ++A+ +I ++ SK GEAE L+ AF
Sbjct: 237 GVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEA 296
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D + + VV++A T ++
Sbjct: 297 EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGIKS-RGQVVVIAATNRQNS 355
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ VP + R IL + TK LS D +++++A THGFVG D
Sbjct: 356 IDPALRRFGRFDREIDIGVPDDNGRFEILR-IHTK-NMKLSPDVKLEELASNTHGFVGAD 413
Query: 186 XXXXXXXXXXX------XXVETEGT---GQVL-----SYDGVMRALDHVKPSAMRQVLVE 231
++ E +VL + D AL PS++R+ +VE
Sbjct: 414 LAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVE 473
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VPNVKW DIGG DEVK LR+ + +P+ HP+ F + G+ P RG+L +GPPGC KT++AKA
Sbjct: 474 VPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKA 533
Query: 292 LATESKLNFISVK 304
+A+E NF+S+K
Sbjct: 534 VASECSANFVSIK 546
Score = 177 (67.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
++ + + DIGG + ++R+ +E PL+HP F LG+KPPRG+L++GPPG KT IA+
Sbjct: 200 KLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIAR 259
Query: 291 ALATESKLNFISV 303
A+A E+ F +
Sbjct: 260 AVANETGAFFFLI 272
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/182 (28%), Positives = 85/182 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++AS + V I+ ++ + ++GE+E ++ F
Sbjct: 510 GMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKA 569
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S D R+++ L+T++D + + + + T
Sbjct: 570 RAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKN-LFFIGATNR 628
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
+ +D +L PGRLDQ I +P+P R +IL +L K P + + I +A T GF G
Sbjct: 629 PELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVP-IDFLAQKTAGFSG 687
Query: 184 GD 185
D
Sbjct: 688 AD 689
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 455 (165.2 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 107/313 (34%), Positives = 171/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VPN+ W DIGG D+VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/182 (28%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKN-VFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P S D + +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVD-LDFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 178 (67.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 453 (164.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 109/313 (34%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 236 GVKPPRGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 295
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A VV++A T ++
Sbjct: 296 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVVVMAATNRPNS 354
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
VD +LR GR D+EI++ +P R IL + TK LS D ++Q++ THG VG D
Sbjct: 355 VDAALRRFGRFDREIDIGIPDSTGRLEILQ-IHTK-NMKLSEDVDLEQISAETHGHVGAD 412
Query: 186 XXXXXXXXXXXXX------VETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVE 231
++ E ++ D AL PSA+R+ +VE
Sbjct: 413 LAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVE 472
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP+V W DIGG DEVK +L++ V++P+++P+ F + G+ P RG+L +GPPGC KT++AKA
Sbjct: 473 VPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKA 532
Query: 292 LATESKLNFISVK 304
+A E + NF+S+K
Sbjct: 533 IANECQANFVSIK 545
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 50/182 (27%), Positives = 85/182 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + V I+ ++ + ++GE+E ++ F
Sbjct: 509 GMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKA 568
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSDQ---ERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G D R+++ ++T++D + + V ++ T
Sbjct: 569 RQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKN-VFIIGATNR 627
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + ++ IT GF G
Sbjct: 628 PDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVD-LMYLSKITEGFSG 686
Query: 184 GD 185
D
Sbjct: 687 AD 688
Score = 176 (67.0 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 30/70 (42%), Positives = 49/70 (70%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT++A+A+A
Sbjct: 202 DIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVA 261
Query: 294 TESKLNFISV 303
E+ F +
Sbjct: 262 NETGAFFFLI 271
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 107/313 (34%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK LS D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDSTGRLEILQ-IHTK-NMKLSDDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + ++ V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-SIKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVD-VDFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 107/313 (34%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK LS D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDSTGRLEILQ-IHTK-NMKLSDDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 184 (69.8 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVD-LDFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 448 (162.8 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 109/316 (34%), Positives = 172/316 (54%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ AF
Sbjct: 235 KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 294
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R ++ + ERR++S L+T +D L +A V+++ T
Sbjct: 295 EEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS-RAHVIVMGATNR 353
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + TK L+ D +++V+ THG+V
Sbjct: 354 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR-IHTK-NMKLAEDVDLERVSKDTHGYV 411
Query: 183 GGDXXXXXXXXXXXXXVET---------EGTGQVL-----SYDGVMRALDHVKPSAMRQV 228
G D E E ++L S D AL + PSA+R+
Sbjct: 412 GADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRET 471
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFIS+K
Sbjct: 532 AKAIANECQANFISIK 547
Score = 192 (72.6 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 51/182 (28%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 511 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 570
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S + R+L+ L+T++D ++ + V ++ T
Sbjct: 571 RQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKT-VFIIGATNR 629
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D +L PGRLDQ I +P+P + R I L K P + D ++ +A T GF G
Sbjct: 630 PDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVD-LRALAKYTQGFSG 688
Query: 184 GD 185
D
Sbjct: 689 AD 690
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 265 ETGAFFFCI 273
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 446 (162.1 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 446 (162.1 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 446 (162.1 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 446 (162.1 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 446 (162.1 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 446 (162.1 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 50/183 (27%), Positives = 89/183 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
D +D ++ PGRLDQ I +P+P R AIL L K P + + D ++ +A +T+GF
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFS 685
Query: 183 GGD 185
G D
Sbjct: 686 GAD 688
Score = 177 (67.4 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 446 (162.1 bits), Expect = 2.6e-41, P = 2.6e-41
Identities = 106/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 250 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 309
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 310 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 368
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 369 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 426
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 427 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 486
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 487 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 546
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 547 IANECQANFISIK 559
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 523 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 582
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 583 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 641
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 642 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 700
Query: 184 GD 185
D
Sbjct: 701 AD 702
Score = 177 (67.4 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 217 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 276
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 277 ETGAFFFLI 285
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 444 (161.4 bits), Expect = 2.9e-41, P = 2.9e-41
Identities = 103/308 (33%), Positives = 163/308 (52%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
+L+ G+ G+L+ G G GKT L+ +A + V + ++ GE+E L+
Sbjct: 212 SLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRR 271
Query: 64 AFXXXXXXXXXX---XXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLL 118
F C R S E RL++ L+T +D + + V++
Sbjct: 272 VFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPENRLVAQLLTLMDAIGSHEGFVIIG 331
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
A T D++D +LR PGR D+E+ + VPS QR +IL C+ ++P S D + +A +T
Sbjct: 332 A-TNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLSPDVD-LNTLAEMT 389
Query: 179 HGFVGGDXXXXXXXXXXXXXVETE-GTGQVLSYDGVMRALDHVKPSAMRQVL--VEVPNV 235
G+VG D ++ G + +S M+AL HV+PS +R + + +
Sbjct: 390 CGYVGADLSALSREAALQAMRHSQMGASEPVSMQHFMQALRHVQPSCLRSSIGATDFKPI 449
Query: 236 KWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATE 295
W IGG ++VKLKL+QS+EWP++ PEAF RLG+ PRG+L++GPPGC+KT + KA A+
Sbjct: 450 GWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASS 509
Query: 296 SKLNFISV 303
S +F S+
Sbjct: 510 SHCSFFSL 517
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 22/69 (31%), Positives = 44/69 (63%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + +GG ++V L++ + +PL++P + +LG+ PRG+L+ GPPG KT++ + +A
Sbjct: 184 VSAAPLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAK 243
Query: 295 ESKLNFISV 303
+ ++V
Sbjct: 244 DIGATLVTV 252
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 33/86 (38%), Positives = 44/86 (51%)
Query: 107 RLH--ELQ-AC---VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLT 160
RLH ELQ C V+++A T + +D +L PGRLDQ I +P P R A+L
Sbjct: 612 RLHQMELQEVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTK 671
Query: 161 KVPHSLSTDQ-IQQVAFITHGFVGGD 185
VP L D ++ +A T F G D
Sbjct: 672 SVP--LHQDVCLEDLAAQTELFSGAD 695
Score = 85 (35.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
G+ + G+L+YG G KT+L+ + AS + A++FS + G++E L F
Sbjct: 482 GVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLF 538
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 445 (161.7 bits), Expect = 3.3e-41, P = 3.3e-41
Identities = 113/316 (35%), Positives = 171/316 (54%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 251 KSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 310
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R ++ + ERR++S L+T +D + + ++ VV++A T
Sbjct: 311 EEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGM-KARSNVVVMAATNR 369
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+E+++ +P R IL + TK L+ D ++Q+A THG+V
Sbjct: 370 PNSIDPALRRFGRFDREVDVGIPDPTGRLEILR-IHTK-NMKLADDVDLEQIAAETHGYV 427
Query: 183 GGDXXXXXXXXXXXXXVET---------EGTGQVLSYDGVMR-----ALDHVKPSAMRQV 228
G D E E +VL GV AL PSA+R+
Sbjct: 428 GSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRET 487
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV+W DIGG +EVK +LR++V+ P+ + E F R G+ P +G+L FGPPG KT++
Sbjct: 488 VVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
Query: 289 AKALATESKLNFISVK 304
AKA+A E NFISVK
Sbjct: 548 AKAIANECSANFISVK 563
Score = 196 (74.1 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L +G GTGKT L ++A+ + + ++ ++ S ++GE+E ++ F
Sbjct: 527 GVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKA 586
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R S + R+++ L+T++D ++ + V ++ T
Sbjct: 587 RAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKN-VFVIGATNRP 645
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGRLDQ I +P+P + R +IL L P + D ++ VA THGF G
Sbjct: 646 DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVD-LRAVAKATHGFSGA 704
Query: 185 D 185
D
Sbjct: 705 D 705
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG ++R+ VE PL+HP+ F +GIKPPRGILM+GPPG KT++A+A+A
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 281 ETGAFFFLI 289
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 444 (161.4 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 106/313 (33%), Positives = 169/313 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGAD 410
Query: 186 XXXXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVE 231
++ E + ++ D AL PSA+R+ +VE
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP V W DIGG ++VK +L+ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 531 IANECQANFISIK 543
Score = 187 (70.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GD 185
D
Sbjct: 685 AD 686
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 444 (161.4 bits), Expect = 4.1e-41, P = 4.1e-41
Identities = 107/316 (33%), Positives = 174/316 (55%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ AF
Sbjct: 234 KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 293
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R ++ + ERR++S L+T +D L +A V+++ T
Sbjct: 294 EEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKS-RAHVIVMGATNR 352
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + TK L+ D +++++ THG+V
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR-IHTK-NMKLAEDVDLERISKDTHGYV 410
Query: 183 GGDXXXXXXXXXXX------XXVETEGTG---QVLSYDGVMR-----ALDHVKPSAMRQV 228
G D ++ E ++L+ V AL + PSA+R+
Sbjct: 411 GADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRET 470
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W+DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFISVK
Sbjct: 531 AKAIANECQANFISVK 546
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 52/183 (28%), Positives = 86/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++ F
Sbjct: 510 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKA 569
Query: 69 XXXXXXXXXXXXXXXXCT---GRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTT 122
T G + D R+L+ L+T++D ++ + V ++ T
Sbjct: 570 RQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT-VFIIGATN 628
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLDQ I +P+P D R I L K P + D I +A T GF
Sbjct: 629 RPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVD-IGALAKYTQGFS 687
Query: 183 GGD 185
G D
Sbjct: 688 GAD 690
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 31/70 (44%), Positives = 50/70 (71%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
+V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 294 TESKLNFISV 303
E+ F +
Sbjct: 263 NETGAFFFCI 272
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 106/310 (34%), Positives = 158/310 (50%)
Query: 3 YALQSN--GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFR 60
Y L++ G+K G+L+YG GTGKTSL+ ++ H +V+ + GE+E
Sbjct: 44 YPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKV 103
Query: 61 LKAAFXXXXXXXXXXXXXXXXXXX----CTGRN-RSDQERRLLSCLVTQVDRLHELQAC- 114
L+ AF C R+ R +Q+ R+ S L T +D +
Sbjct: 104 LREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMDSNKPSSSAP 163
Query: 115 -VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQ 173
VV++A T +D +D +LR GR D +E+ P+ + R IL KV S D +Q
Sbjct: 164 RVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVD-LQA 222
Query: 174 VAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVP 233
+A +G+VG D + + + S D + A V PS R + VE+P
Sbjct: 223 IAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKI-AKSVVGPSINRGITVEIP 281
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
V W D+GG ++K KL+Q+VEWP+KH AF ++GI P RGIL+ GPPGCSKT +AKA A
Sbjct: 282 KVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAA 341
Query: 294 TESKLNFISV 303
++ +F S+
Sbjct: 342 NAAQASFFSL 351
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 50/184 (27%), Positives = 82/184 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ GIL++G G KT+L + A+ + + A++FS + GE E L+ F
Sbjct: 316 GISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRA 375
Query: 69 XXXX-XXXXXXXXXXXXC-----TGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
C + N S RLLS L+T++D L E + +++LA T
Sbjct: 376 RLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKG-ILVLAATN 434
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGF 181
+D +L PGR D + +P P + R IL + +L D ++++A T F
Sbjct: 435 RPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNM--TLGDDVDLRKIAEETDLF 492
Query: 182 VGGD 185
G +
Sbjct: 493 TGAE 496
Score = 134 (52.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 234 NVKW---SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
N KW ++IGG + LR+ + +P ++P LG+K PRG+L++GPPG KT + +
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 291 ALATESKLNFI 301
A+ E + I
Sbjct: 75 AVVQECDAHLI 85
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 443 (161.0 bits), Expect = 5.3e-41, P = 5.3e-41
Identities = 107/316 (33%), Positives = 173/316 (54%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ AF
Sbjct: 234 KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 293
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R ++ + ERR++S L+T +D L +A V+++ T
Sbjct: 294 EEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKS-RAHVIVMGATNR 352
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + TK L+ D +++++ THG+V
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR-IHTK-NMKLAEDVDLERISKDTHGYV 410
Query: 183 GGDXXXXXXXXXXX------XXVETEGTG---QVLSYDGVMR-----ALDHVKPSAMRQV 228
G D ++ E ++L+ V AL + PSA+R+
Sbjct: 411 GADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRET 470
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFISVK
Sbjct: 531 AKAIANECQANFISVK 546
Score = 196 (74.1 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 51/182 (28%), Positives = 86/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++ F
Sbjct: 510 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKA 569
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S + R+L+ L+T++D ++ + V ++ T
Sbjct: 570 RQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKT-VFIIGATNR 628
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D +L PGRLDQ I +P+P D R I L K P + D + +A T GF G
Sbjct: 629 PDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVD-VTALAKYTQGFSG 687
Query: 184 GD 185
D
Sbjct: 688 AD 689
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 264 ETGAFFFCI 272
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 443 (161.0 bits), Expect = 5.6e-41, P = 5.6e-41
Identities = 116/317 (36%), Positives = 172/317 (54%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 252 KSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 311
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R ++ + ERR++S L+T +D + + ++ VV++A T
Sbjct: 312 EEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGM-KARSNVVVMAATNR 370
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+E+++ +P R IL + TK L D ++ +A THG+V
Sbjct: 371 PNSIDPALRRFGRFDREVDIGIPDPTGRLEILS-IHTK-NMKLGEDVDLETIAAETHGYV 428
Query: 183 GGDXXXXXXXXXXXXXVET-------EGT--GQVLSYDGVMR-----ALDHVKPSAMRQV 228
G D E E T +VL GV AL PSA+R+V
Sbjct: 429 GSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREV 488
Query: 229 -LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
+VEVPNV+W DIGG +EVK +L +SV++P+ HPE F + G+ P RG+L +GPPG KTM
Sbjct: 489 AVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTM 548
Query: 288 IAKALATESKLNFISVK 304
+AKA+A E NFISVK
Sbjct: 549 LAKAVANECAANFISVK 565
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L YG GTGKT L ++A+ + + ++ ++ S ++GE+E ++ F
Sbjct: 526 QKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIF 585
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAV 120
R S + R+++ L+T++D + + V ++
Sbjct: 586 DKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKN-VFVIGA 644
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T + +D +L PGRLD + +P+P + R IL L K P + D I+ +A THG
Sbjct: 645 TNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVD-IEFIASKTHG 703
Query: 181 FVGGD 185
F G D
Sbjct: 704 FSGAD 708
Score = 184 (69.8 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPPRGILM+GPPG KT++A+A+A
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 282 ETGAFFFLI 290
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 112/316 (35%), Positives = 175/316 (55%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 242 KSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 301
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R+++ + ERR++S L+T +D + + ++ VV++A T
Sbjct: 302 EEAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGM-KARSNVVVIAATNR 360
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+E+++ VP + R IL + TK L+ D ++ +A THGFV
Sbjct: 361 PNSIDPALRRFGRFDREVDIGVPDAEGRLEILR-IHTK-NMKLADDVDLEAIASETHGFV 418
Query: 183 GGDXXXXXXXXXXXXXVET-------EGT--GQVLSYDGVMR-----ALDHVKPSAMRQV 228
G D E E T +VL+ GV + AL + PSA+R+
Sbjct: 419 GADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRET 478
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VE NV W DIGG D +K +L+++VE+P+ HP+ + + G+ P +G+L FGPPG KT++
Sbjct: 479 VVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLL 538
Query: 289 AKALATESKLNFISVK 304
AKA+ATE NFISVK
Sbjct: 539 AKAVATEVSANFISVK 554
Score = 208 (78.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L +G GTGKT L ++A+ + + + ++ ++ S +YGE+E ++ F
Sbjct: 515 QKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 574
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAV 120
R S + R+++ L+T++D ++ + V ++
Sbjct: 575 DKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKN-VFVIGA 633
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T D +D +L PGRLDQ I +P+P R +IL L P D + ++A ITHG
Sbjct: 634 TNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLD-LNEIAKITHG 692
Query: 181 FVGGD 185
F G D
Sbjct: 693 FSGAD 697
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPP+GILM+GPPG KT++A+A+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 272 ETGAFFFLI 280
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 112/316 (35%), Positives = 175/316 (55%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+S G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 242 KSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 301
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R+++ + ERR++S L+T +D + + ++ VV++A T
Sbjct: 302 EEAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGM-KARSNVVVIAATNR 360
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+E+++ VP + R IL + TK L+ D ++ +A THGFV
Sbjct: 361 PNSIDPALRRFGRFDREVDIGVPDAEGRLEILR-IHTK-NMKLADDVDLEAIASETHGFV 418
Query: 183 GGDXXXXXXXXXXXXXVET-------EGT--GQVLSYDGVMR-----ALDHVKPSAMRQV 228
G D E E T +VL+ GV + AL + PSA+R+
Sbjct: 419 GADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRET 478
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VE NV W DIGG D +K +L+++VE+P+ HP+ + + G+ P +G+L FGPPG KT++
Sbjct: 479 VVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLL 538
Query: 289 AKALATESKLNFISVK 304
AKA+ATE NFISVK
Sbjct: 539 AKAVATEVSANFISVK 554
Score = 208 (78.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L +G GTGKT L ++A+ + + + ++ ++ S +YGE+E ++ F
Sbjct: 515 QKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 574
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAV 120
R S + R+++ L+T++D ++ + V ++
Sbjct: 575 DKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKN-VFVIGA 633
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T D +D +L PGRLDQ I +P+P R +IL L P D + ++A ITHG
Sbjct: 634 TNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLD-LNEIAKITHG 692
Query: 181 FVGGD 185
F G D
Sbjct: 693 FSGAD 697
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPP+GILM+GPPG KT++A+A+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 272 ETGAFFFLI 280
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 437 (158.9 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 104/312 (33%), Positives = 167/312 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG G GKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 232 GVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 291
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D L +A V+++ T ++
Sbjct: 292 EKNAPSIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGLKS-RAHVIVMGATNRPNS 350
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDX 186
+D +LR GR D+EI++ +P R I+ + TK T ++ VA THG+VG D
Sbjct: 351 IDPALRRFGRFDREIDITIPDATGRLEIMR-IHTKNMKLDETVDLEAVANETHGYVGADL 409
Query: 187 XXXXXXXXXX------XXVETEG---TGQVL-----SYDGVMRALDHVKPSAMRQVLVEV 232
++ E + ++L + D AL PSA+R+ +VEV
Sbjct: 410 AALCTESALQCIREKMDVIDLEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEV 469
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P W DIGG + VK +LR++V++P++HPE F + G++P +G+L +GPPGC KT++AKA+
Sbjct: 470 PTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAI 529
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 530 ANECQANFISIK 541
Score = 191 (72.3 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 34/69 (49%), Positives = 50/69 (72%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPGC KTMIA+A+A
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVAN 258
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 259 ETGAFFFLI 267
Score = 184 (69.8 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 48/182 (26%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 505 GMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKA 564
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
R S + R+++ ++T++D ++ + V ++ T
Sbjct: 565 RQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKN-VFIIGATNR 623
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ + T GF G
Sbjct: 624 PDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVD-LEFLGQKTQGFSG 682
Query: 184 GD 185
D
Sbjct: 683 AD 684
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 432 (157.1 bits), Expect = 8.3e-40, P = 8.3e-40
Identities = 109/313 (34%), Positives = 169/313 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL++G GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 239 GVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC 298
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + E+R++S L+T +D L + +A VV++A T ++
Sbjct: 299 EKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGL-KTRAHVVVIAATNRPNS 357
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ +P R IL + TK L D ++QVA HGFVG D
Sbjct: 358 IDGALRRFGRFDREIDIGIPDAVGRLEILR-IHTK-NMKLGEDVDLEQVANECHGFVGAD 415
Query: 186 XXXXXXXXXXXXXVET-------EGT--GQVLSYDGVMR-----ALDHVKPSAMRQVLVE 231
E + T +VL+ V A+ PSA+R+ +VE
Sbjct: 416 LASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVE 475
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
PN WSDIGG VK +L++ V++P++HPE + + G++P RG+L +GPPGC KT++AKA
Sbjct: 476 TPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKA 535
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 536 IANECQANFISIK 548
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 39/97 (40%), Positives = 60/97 (61%)
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
V+ Y+G D +K + L EV + D+GG + ++++ VE PL+HP+ F
Sbjct: 186 VIHYEG-----DPIKREEEEEALNEVG---YDDLGGVRKQLAQIKEMVELPLRHPQLFKA 237
Query: 267 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+G+KPPRGIL+FGPPG KT+IA+A+A E+ F +
Sbjct: 238 IGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Score = 172 (65.6 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 48/182 (26%), Positives = 85/182 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 512 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 571
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
R S + R+++ ++T++D ++ + V ++ T
Sbjct: 572 RAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKN-VFIIGATNR 630
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R I L K P S D + +A T GF G
Sbjct: 631 PDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLD-LNFLAKNTVGFSG 689
Query: 184 GD 185
D
Sbjct: 690 AD 691
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 432 (157.1 bits), Expect = 8.3e-40, P = 8.3e-40
Identities = 109/313 (34%), Positives = 169/313 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL++G GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 239 GVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC 298
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + E+R++S L+T +D L + +A VV++A T ++
Sbjct: 299 EKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGL-KTRAHVVVIAATNRPNS 357
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ +P R IL + TK L D ++QVA HGFVG D
Sbjct: 358 IDGALRRFGRFDREIDIGIPDAVGRLEILR-IHTK-NMKLGEDVDLEQVANECHGFVGAD 415
Query: 186 XXXXXXXXXXXXXVET-------EGT--GQVLSYDGVMR-----ALDHVKPSAMRQVLVE 231
E + T +VL+ V A+ PSA+R+ +VE
Sbjct: 416 LASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVE 475
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
PN WSDIGG VK +L++ V++P++HPE + + G++P RG+L +GPPGC KT++AKA
Sbjct: 476 TPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKA 535
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 536 IANECQANFISIK 548
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 39/97 (40%), Positives = 60/97 (61%)
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
V+ Y+G D +K + L EV + D+GG + ++++ VE PL+HP+ F
Sbjct: 186 VIHYEG-----DPIKREEEEEALNEVG---YDDLGGVRKQLAQIKEMVELPLRHPQLFKA 237
Query: 267 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+G+KPPRGIL+FGPPG KT+IA+A+A E+ F +
Sbjct: 238 IGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Score = 172 (65.6 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 48/182 (26%), Positives = 85/182 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 512 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 571
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
R S + R+++ ++T++D ++ + V ++ T
Sbjct: 572 RAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKN-VFIIGATNR 630
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R I L K P S D + +A T GF G
Sbjct: 631 PDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLD-LNFLAKNTVGFSG 689
Query: 184 GD 185
D
Sbjct: 690 AD 691
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 431 (156.8 bits), Expect = 1.0e-39, P = 1.0e-39
Identities = 103/313 (32%), Positives = 171/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 231 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 290
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R+++ + ERR++S L+T +D + + + ++++A T ++
Sbjct: 291 EKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKK-SSHLIVMAATNRPNS 349
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ +P R +L + TK L D ++Q+A +HG VG D
Sbjct: 350 IDPALRRFGRFDREIDIGIPDATGRLEVLR-IHTK-NMKLHDDVDLEQIAAESHGHVGAD 407
Query: 186 XXXXXXXXXXXXX------VETEGT---GQVLS-----YDGVMRALDHVKPSAMRQVLVE 231
++ E +VL+ + A+ PSA+R+ +VE
Sbjct: 408 LASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVE 467
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VPN W+DIGG + VK +L++ V++P++HP+ F + G++P RG+L +GPPGC KT++AKA
Sbjct: 468 VPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKA 527
Query: 292 LATESKLNFISVK 304
+A E + NFISVK
Sbjct: 528 IANECQANFISVK 540
Score = 185 (70.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM+ G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++ F
Sbjct: 504 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 563
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSDQ---ERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 564 RSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKN-VFIIGATNR 622
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T GF G
Sbjct: 623 PDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVD-LTYIAKVTQGFSG 681
Query: 184 GD 185
D
Sbjct: 682 AD 683
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGILM+GPPG KT+IA+A+A
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 258 ETGAFFFLI 266
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 429 (156.1 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 105/313 (33%), Positives = 170/313 (54%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 244 GIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA 303
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R+++ + ERR++S L+T +D + + ++ VV++A T ++
Sbjct: 304 EKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGM-KARSNVVVIAATNRPNS 362
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+E+++ +P R +L + TK L+ D ++ +A THG+VG D
Sbjct: 363 IDPALRRFGRFDREVDIGIPDATGRLEVLR-IHTK-NMKLADDVDLEALAAETHGYVGAD 420
Query: 186 XXXXXXXXXXXXXVET---------EGTGQVLSYDGVMR-----ALDHVKPSAMRQVLVE 231
E E +VL GV AL + PSA+R+ +VE
Sbjct: 421 IASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVE 480
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
NV W D+GG DE+K +L+++VE+P+ HP+ + + G+ P +G+L +GPPG KT++AKA
Sbjct: 481 SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA 540
Query: 292 LATESKLNFISVK 304
+ATE NFISVK
Sbjct: 541 VATEVSANFISVK 553
Score = 194 (73.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L YG GTGKT L ++A+ + + + ++ ++ S +YGE+E ++ F
Sbjct: 517 GLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKA 576
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQ---ERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R S D R+++ L+T++D ++ + V ++ T
Sbjct: 577 RAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKN-VFVIGATNR 635
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P + R +IL+ L K P + + +A T GF G
Sbjct: 636 PDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLE-LTAIAKATQGFSG 694
Query: 184 GD 185
D
Sbjct: 695 AD 696
Score = 184 (69.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPPRG+LM+GPPG KT++A+A+A
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 271 ETGAFFFLI 279
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 428 (155.7 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 102/311 (32%), Positives = 165/311 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE E +
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPA 293
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVD 128
+ + + ERR++S L+T +D L + +A V+++A T +++D
Sbjct: 294 PPPLKTAGIFKSDDCFPSPQTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNSID 352
Query: 129 VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGDXX 187
+LR GR D+E+++ +P R IL + TK L+ D ++QVA THG VG D
Sbjct: 353 PALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGADLA 410
Query: 188 XXXXXXXXXX-------------XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVEVP 233
++ E + ++ D AL PSA+R+ +VEVP
Sbjct: 411 ALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVP 470
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+A
Sbjct: 471 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 530
Query: 294 TESKLNFISVK 304
E + NFIS+K
Sbjct: 531 NECQANFISIK 541
Score = 185 (70.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 505 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 564
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 565 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 623
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 624 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LDFLAKMTNGFSG 682
Query: 184 GD 185
D
Sbjct: 683 AD 684
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 244 (91.0 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 41/76 (53%), Positives = 61/76 (80%)
Query: 229 LVE-VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
LVE + NV W DIGG D++K +LRQ++EWP + E+F + G+ PP+GI+++GPPGCSKT
Sbjct: 560 LVENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTT 619
Query: 288 IAKALATESKLNFISV 303
+ KA+A+ SKL+F+S+
Sbjct: 620 LVKAVASSSKLSFLSL 635
Score = 213 (80.0 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 54/179 (30%), Positives = 91/179 (50%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+ G GTGKT L+ ++ + + I A + + GE E L+ F
Sbjct: 323 GILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDKSIA 382
Query: 75 XXXX------XXXXXXCTGRNRSDQ-ERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
C R++S Q E R++ +T +D + + ++++A T + +
Sbjct: 383 KSNSPIVVFIDEIDTICPPRSKSTQNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQI 442
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLS-TDQIQQVAFITHGFVGGD 185
D +LR PGRLD+EIE+PVP++ QR IL +K+P S + ++ + Q+A T G+VG +
Sbjct: 443 DNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGAN 501
Score = 198 (74.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 50/183 (27%), Positives = 92/183 (50%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ GI++YG G KT+L+ ++AS K+ + + A +FS + G++E ++ F
Sbjct: 600 GLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKA 659
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQ------ERRLLSCLVTQVDRLHELQACVVLLAVTT 122
+ RN SD + R+LS + ++D + +L V+++ T
Sbjct: 660 RQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNG-VIVIGATN 718
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
LD +D +L PGR D+ +E+ +P + R IL +P S + + I+ ++ +T+GF
Sbjct: 719 RLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNLIE-ISNLTNGFS 777
Query: 183 GGD 185
G D
Sbjct: 778 GAD 780
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 240 IGGQDE-VKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKL 298
IGG +E +KL L + + +P+ P+ F L I PP+GIL+ GPPG KT + + + +
Sbjct: 289 IGGLNEQIKL-LEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDI 347
Query: 299 NFISV 303
IS+
Sbjct: 348 EMISI 352
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 232 (86.7 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 41/89 (46%), Positives = 65/89 (73%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
AL+ PS++R+ V++P V W+DIGG +EVK +L++++ +PL++ + + +GI
Sbjct: 912 ALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGI 971
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L++GPPGC KT++AKA+A E K NFISVK
Sbjct: 972 LLYGPPGCGKTLLAKAIANECKANFISVK 1000
Score = 221 (82.9 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 59/183 (32%), Positives = 97/183 (53%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G+ G+L++G+ GTGKTS+ ++A+ + +I ++ SK GE+E +L+ F
Sbjct: 555 SIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFK 614
Query: 67 XXXXXXXXXXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R++S+ E +R++S L+T +D L + V++LA T
Sbjct: 615 KASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNN-VLVLAATNRP 673
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPH-SLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+EIE+PVP R IL LTK L D ++++A HG+V
Sbjct: 674 NSIDPALRRFGRFDREIEIPVPDEQGRYEIL---LTKTKKMKLDPDVNLRKIAKECHGYV 730
Query: 183 GGD 185
G D
Sbjct: 731 GAD 733
Score = 188 (71.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+YG G GKT L ++A+ K + + ++ ++ + ++GE+E ++ F
Sbjct: 970 GILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPC 1029
Query: 75 XXXXXXXXXXCTGRN---RSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
RN +D R+++ ++T++D ++E + + ++A T D +D +L
Sbjct: 1030 IIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKT-IFIIAATNRPDILDKAL 1088
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
PGRLD+ I + +P R +I +L P + D I +A T GF G D
Sbjct: 1089 TRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVD-IHDMAKRTEGFSGAD 1141
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + D+GG + K+R+ +E PLK+PE F +GI P+G+LM G PG KT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 294 TES 296
ES
Sbjct: 583 NES 585
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 232 (86.7 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 41/89 (46%), Positives = 65/89 (73%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
AL+ PS++R+ V++P V W+DIGG +EVK +L++++ +PL++ + + +GI
Sbjct: 912 ALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGI 971
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L++GPPGC KT++AKA+A E K NFISVK
Sbjct: 972 LLYGPPGCGKTLLAKAIANECKANFISVK 1000
Score = 221 (82.9 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 59/183 (32%), Positives = 97/183 (53%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G+ G+L++G+ GTGKTS+ ++A+ + +I ++ SK GE+E +L+ F
Sbjct: 555 SIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFK 614
Query: 67 XXXXXXXXXXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R++S+ E +R++S L+T +D L + V++LA T
Sbjct: 615 KASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNN-VLVLAATNRP 673
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPH-SLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+EIE+PVP R IL LTK L D ++++A HG+V
Sbjct: 674 NSIDPALRRFGRFDREIEIPVPDEQGRYEIL---LTKTKKMKLDPDVNLRKIAKECHGYV 730
Query: 183 GGD 185
G D
Sbjct: 731 GAD 733
Score = 188 (71.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+YG G GKT L ++A+ K + + ++ ++ + ++GE+E ++ F
Sbjct: 970 GILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPC 1029
Query: 75 XXXXXXXXXXCTGRN---RSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
RN +D R+++ ++T++D ++E + + ++A T D +D +L
Sbjct: 1030 IIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKT-IFIIAATNRPDILDKAL 1088
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
PGRLD+ I + +P R +I +L P + D I +A T GF G D
Sbjct: 1089 TRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVD-IHDMAKRTEGFSGAD 1141
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + D+GG + K+R+ +E PLK+PE F +GI P+G+LM G PG KT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 294 TES 296
ES
Sbjct: 583 NES 585
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 415 (151.1 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 105/313 (33%), Positives = 168/313 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL++G GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 240 GIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC 299
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D + ++ +V++A T ++
Sbjct: 300 EKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKG-RSNLVVIAATNRPNS 358
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ +P R IL + TK L+ D ++Q+A HGFVG D
Sbjct: 359 IDGALRRFGRFDREIDIGIPDAVGRLEILR-IHTK-NMKLADDVDLEQIANECHGFVGAD 416
Query: 186 XXXXXXXXXXXXX------VETEGT---GQVLSYDGVMR-----ALDHVKPSAMRQVLVE 231
++ E +VL+ V A PSA+R+ +VE
Sbjct: 417 LASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVE 476
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
PN WSDIGG VK +L++ V++P++HPE + + G++P RG+L +GPPGC KT++AKA
Sbjct: 477 TPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKA 536
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 537 IANECQANFISIK 549
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + D+GG + ++++ VE PL+HP+ F +GIKPPRGIL+FGPPG KT+IA+A+A
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 294 TES 296
E+
Sbjct: 266 NET 268
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 513 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 572
Query: 69 XXXX------XXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
G + R+++ ++T++D ++ + V ++ T
Sbjct: 573 RAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-VFIIGATN 631
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D ++ PGRLDQ I +P+P R IL L K P S D + +A T GF
Sbjct: 632 RPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLD-LTFLAKNTVGFS 690
Query: 183 GGD 185
G D
Sbjct: 691 GAD 693
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 415 (151.1 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 105/313 (33%), Positives = 168/313 (53%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL++G GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 240 GIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC 299
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R ++ + ERR++S L+T +D + ++ +V++A T ++
Sbjct: 300 EKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKG-RSNLVVIAATNRPNS 358
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
+D +LR GR D+EI++ +P R IL + TK L+ D ++Q+A HGFVG D
Sbjct: 359 IDGALRRFGRFDREIDIGIPDAVGRLEILR-IHTK-NMKLADDVDLEQIANECHGFVGAD 416
Query: 186 XXXXXXXXXXXXX------VETEGT---GQVLSYDGVMR-----ALDHVKPSAMRQVLVE 231
++ E +VL+ V A PSA+R+ +VE
Sbjct: 417 LASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVE 476
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
PN WSDIGG VK +L++ V++P++HPE + + G++P RG+L +GPPGC KT++AKA
Sbjct: 477 TPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKA 536
Query: 292 LATESKLNFISVK 304
+A E + NFIS+K
Sbjct: 537 IANECQANFISIK 549
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + D+GG + ++++ VE PL+HP+ F +GIKPPRGIL+FGPPG KT+IA+A+A
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 294 TES 296
E+
Sbjct: 266 NET 268
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 513 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 572
Query: 69 XXXX------XXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
G + R+++ ++T++D ++ + V ++ T
Sbjct: 573 RAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-VFIIGATN 631
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D ++ PGRLDQ I +P+P R IL L K P S D + +A T GF
Sbjct: 632 RPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLD-LTFLAKNTVGFS 690
Query: 183 GGD 185
G D
Sbjct: 691 GAD 693
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 413 (150.4 bits), Expect = 7.9e-38, P = 7.9e-38
Identities = 98/309 (31%), Positives = 159/309 (51%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
AL S G++ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 225 ALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRR 284
Query: 64 AFXXXXXXXX---XXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLL 118
F C R Q E R+++ ++T +D + E + VV++
Sbjct: 285 IFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDRE-VVVV 343
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D +LR PGR D+E+ + P+ QR AIL + +K+P S D + +A +T
Sbjct: 344 GSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVD-LNLLAEMT 402
Query: 179 HGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGV--MRALDHVKPSAMRQVL--VEVPN 234
G+VG D + +E + D + A ++PS+ R V+ ++
Sbjct: 403 VGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKIQPSSFRSVIGVTDIKP 462
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V W IGG ++VKLKL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 463 VGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 295 ESKLNFISV 303
+ +F+SV
Sbjct: 523 SCRCSFVSV 531
Score = 144 (55.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
+L V PS + EVP +GG E LR+ + PL++P A A LG++ PRG+
Sbjct: 185 SLSEVPPSE-EEPQPEVP------LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGV 237
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISV 303
L+ GPPG KT + +A+A E+ ++V
Sbjct: 238 LLAGPPGVGKTQLVRAVARETGAELLAV 265
Score = 104 (41.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ + G+L+YG G KT+L+ +LA+ + V + AD+FS F G++E L F
Sbjct: 496 GLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQA 555
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQE----RRLLSCLVTQVD 106
R+ S E R+LS L+ ++D
Sbjct: 556 RANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELD 597
Score = 94 (38.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 37/149 (24%), Positives = 61/149 (40%)
Query: 89 NRSDQERRLLSCLVTQVDRLHEL-QACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPS 147
++SDQ + + E+ + V+++A T D +D +L PGRLD+ I +P P
Sbjct: 609 SKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPD 668
Query: 148 RDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQ 206
R +IL P + D +++VA T F G D E
Sbjct: 669 EKGRLSILKVCTKNTP--MGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVT 726
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNV 235
+ + + +L VKPS + L N+
Sbjct: 727 TVKQEHFLESLKTVKPSLSHKDLTLYKNL 755
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 253 (94.1 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 48/105 (45%), Positives = 71/105 (67%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G L + + AL V+PSA R+ V VPNV W+D+G ++++ +L ++ P++
Sbjct: 542 EEQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVR 601
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+PE F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 602 NPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 646
Score = 189 (71.6 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 53/184 (28%), Positives = 87/184 (47%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 290 QHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLF 349
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVT 121
R D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 350 DQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGAT 409
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
D++D +LR GR D+E+ L +P R IL L K+ T +A +T GF
Sbjct: 410 NRPDSLDPALRRAGRFDREVCLGIPDEASRERILQTLCRKL-RLPETFNFSHLAHLTPGF 468
Query: 182 VGGD 185
VG D
Sbjct: 469 VGAD 472
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/104 (36%), Positives = 61/104 (58%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
+TEG + DG + A+ + A + +++ +VK+ D+GG D LK + ++
Sbjct: 230 KTEGLQEA---DGEIEAILQKRAKA-KSTELQISSVKFEDVGGNDAT-LKEVCKMLIHMR 284
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
HPE + LG+ PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 328
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 45/168 (26%), Positives = 81/168 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 616 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 675
Query: 75 XXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS 130
C RSD+E R+++ L+T++D L Q V +LA T D +D +
Sbjct: 676 VIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLETRQQ-VFILAATNRPDIIDPA 732
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLL---TKVPHSLSTDQIQQVA 175
+ PGRLD+ + + +P R AIL + TK P D ++ +A
Sbjct: 733 ILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVD-LEAIA 779
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 248 (92.4 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 47/105 (44%), Positives = 71/105 (67%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + + + AL V+PSA R+ V VPNV W+DIG ++++ +L ++ P++
Sbjct: 437 EEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVR 496
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+P+ F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 497 NPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 541
Score = 188 (71.2 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 188 GVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 247
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSL 124
R D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 248 VSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRP 307
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D++D +LR GR D+EI L +P R IL L K+ + D +A +T GFVG
Sbjct: 308 DSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHLAHLTPGFVGA 366
Query: 185 D 185
D
Sbjct: 367 D 367
Score = 179 (68.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 38/93 (40%), Positives = 57/93 (61%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + A+ K A R + ++ NVK+ D+GG D + LK + ++HPE + LG+
Sbjct: 133 DGEIEAVLQKKAKA-RGLEFQISNVKFEDVGGND-MTLKEVCKMLIHMRHPEVYHHLGVV 190
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 191 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 223
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 408 (148.7 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 100/304 (32%), Positives = 157/304 (51%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ NG+L+ G G GKT L+ ++A + + I ++ GE+E L++ F
Sbjct: 227 GLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKG 286
Query: 69 XXXXX---XXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
C R S+ E RL++ L+T +D + VV+ A T
Sbjct: 287 REMSCEGPTVLFIDEIDALCPKRGSSNSAPEDRLVAQLLTLLDGVGRKDRMVVV-AATNR 345
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D +LR PGR D+E+ + P+ QR +IL L +P S D ++ +A +T G+VG
Sbjct: 346 PDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLTCSMPISTDIDLVK-LAEMTTGYVG 404
Query: 184 GDXXXXXXXXXXXXXVETE-GTGQVL-SYDGVMRALDHVKPSAMRQV--LVEVPNVKWSD 239
D + + +VL + A ++PS+ R L E + W
Sbjct: 405 ADLTALCREAAMQAVFHSSLDSAEVLINMADFQEAFKKIQPSSFRSAIGLKECKPITWEQ 464
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLN 299
IGG ++VKLKL+QSVEWP+K P+AFAR+G+ P+G+L++GP GC+KT + KA+AT +
Sbjct: 465 IGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCS 524
Query: 300 FISV 303
F+SV
Sbjct: 525 FLSV 528
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
+ G D+V L++ V+ P + P F +LG+ P G+L+ GPPG KT++ KA+A E+
Sbjct: 199 VAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREA 255
Score = 108 (43.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 33/109 (30%), Positives = 49/109 (44%)
Query: 116 VLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQV 174
+++A T D +D +L PGRLD+ I +P P R +IL K+P L TD +Q +
Sbjct: 623 MVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIP--LDTDVSLQDI 680
Query: 175 AFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPS 223
A T F G D E + + +++L VKPS
Sbjct: 681 AARTDLFSGADIENLCKEAALLALQENGLEATAVKHGHFVKSLQTVKPS 729
Score = 93 (37.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ + G+L+YG +G KT+L+ ++A+ + + A++FS + G++E L F
Sbjct: 493 GLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQA 552
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQ----ERRLLSCLVTQVD 106
R+ S R+LS L+ ++D
Sbjct: 553 RANTPAIIFLDEIDSILGSRSHSKSGHGVSERVLSVLLNELD 594
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 407 (148.3 bits), Expect = 3.3e-37, P = 3.3e-37
Identities = 95/307 (30%), Positives = 156/307 (50%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
AL + G+ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 225 ALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRR 284
Query: 64 AFXXXXXXXX---XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAV 120
F C R E R+++ ++T +D + VV++
Sbjct: 285 VFQRARELASRGPSLLFLDEMDALCPQRGSRAPESRVVAQVLTLLDGASGDRE-VVVVGA 343
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T D +D +LR PGR D+E+ + P+ QR IL + +K+P S D + +A +T G
Sbjct: 344 TNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVD-LGLLAEMTVG 402
Query: 181 FVGGDXXXXXXXXXXXXXVETEGT--GQVLSYDGVMRALDHVKPSAMRQV--LVEVPNVK 236
+VG D + +E V+ + A +++PS+ R V L+++ V
Sbjct: 403 YVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGLMDIKPVD 462
Query: 237 WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
W +IGG ++VKLKL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 463 WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 522
Query: 297 KLNFISV 303
+F+SV
Sbjct: 523 HCSFVSV 529
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 221 KPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGP 280
+P + Q EVP +GG E LR+ + PL++P A LG+ PRG+L+ GP
Sbjct: 189 EPPSEAQPQPEVP------LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGP 242
Query: 281 PGCSKTMIAKALATESKLNFISV 303
PG KT + +A+A E+ ++V
Sbjct: 243 PGVGKTQLVRAVAREAGAELLAV 265
Score = 109 (43.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ + G+L+YG G KT+L+ +LA+ V + AD+FS F G++E L F
Sbjct: 494 GLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQA 553
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQERRLLSCLVTQVD 106
R+ S D + R+LS L+ ++D
Sbjct: 554 RASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELD 595
Score = 96 (38.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQ 173
V+++A T D +D +L PGRLD+ I +P P R +IL +P + D ++
Sbjct: 622 VMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMP--IGPDVSLEN 679
Query: 174 VAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPS 223
+A T F G D E + + +++L VKPS
Sbjct: 680 LAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPS 729
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 248 (92.4 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 47/105 (44%), Positives = 71/105 (67%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + + + AL V+PSA R+ V VPNV W+DIG ++++ +L ++ P++
Sbjct: 426 EEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVR 485
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+P+ F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 486 NPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 530
Score = 188 (71.2 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 177 GVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 236
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSL 124
R D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 237 VSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRP 296
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D++D +LR GR D+EI L +P R IL L K+ + D +A +T GFVG
Sbjct: 297 DSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHLAHLTPGFVGA 355
Query: 185 D 185
D
Sbjct: 356 D 356
Score = 179 (68.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 38/93 (40%), Positives = 57/93 (61%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + A+ K A R + ++ NVK+ D+GG D + LK + ++HPE + LG+
Sbjct: 122 DGEIEAVLQKKAKA-RGLEFQISNVKFEDVGGND-MTLKEVCKMLIHMRHPEVYHHLGVV 179
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 180 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 212
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/151 (27%), Positives = 75/151 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 500 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 559
Query: 75 XXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS 130
C RSD+E R+++ L+T++D L Q V ++A T D +D +
Sbjct: 560 VIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLEARQQ-VFIMAATNRPDIIDPA 616
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTK 161
+ PGRLD+ + + +P R AIL + TK
Sbjct: 617 ILRPGRLDKTLFVGLPPPADRLAILKTI-TK 646
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 251 (93.4 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 41/97 (42%), Positives = 69/97 (71%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
+ Y+ ++AL ++P+A R+ VP+V W+++G V+L+L ++ P+K PE + ++
Sbjct: 503 IKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKV 562
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
GI P G+L++GPPGC KT++AKA+A ES+ NFIS+K
Sbjct: 563 GISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIK 599
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PN +GG D+V +L + + P+ HPE F G++PPRG+L+ GPPGC KT IA AL
Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 293 ATESKLNFISV 303
A E ++ FIS+
Sbjct: 260 AGELQVPFISI 270
Score = 186 (70.5 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 55/188 (29%), Positives = 94/188 (50%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G++ G+L++G G GKTS+ ++LA ++V + I + S GE+E +++ F
Sbjct: 233 STGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFD 292
Query: 67 XXXXXXXXXXXXXXXXXXCTGRN---RSDQERRLLSCLVTQVDRLHELQAC---VVLLAV 120
R+ + + ERR+++ L+T +D L + V+++
Sbjct: 293 EARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGA 352
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD---QIQQVAFI 177
T D++D +LR GR D+EI L VP+ R LH +L K+ +L D ++A +
Sbjct: 353 TNRPDSLDAALRRAGRFDREICLNVPNEVSR---LH-ILKKMSDNLKIDGAIDFAKLAKL 408
Query: 178 THGFVGGD 185
T GFVG D
Sbjct: 409 TPGFVGAD 416
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 37/163 (22%), Positives = 82/163 (50%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L++G G GKT L ++A+ + + + I+ ++ +K+ GE+E ++ F
Sbjct: 563 GISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRA 622
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R+ S + R+++ L+T++D L++ + + ++ T D
Sbjct: 623 RASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRG-IFVIGATNRPDM 681
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
+D ++ PGRLD+ + + +P+ +++ I+ L LS+D
Sbjct: 682 IDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSD 724
Score = 42 (19.8 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 94 ERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIE 142
+R + + +V RLH L+ L + ++D ++ TPG + +++
Sbjct: 370 DREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLK 418
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 375 (137.1 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
Identities = 85/199 (42%), Positives = 122/199 (61%)
Query: 108 LHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL--LTKVPHS 165
L + + CV+L V +S + +D+ R R E E+ VP++D+R IL + + P
Sbjct: 343 LGDEKKCVIL-CVRSS-ETLDIGFRV--RFPIEAEITVPTQDERLDILSKIGNIYNFPLE 398
Query: 166 LSTDQIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAM 225
L D VA THGF GGD G+ + V A ++P+ +
Sbjct: 399 LHLD----VARHTHGFTGGDLCSLLKAAKFAR-------GRT-HLERVNDARKRIRPTGI 446
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
RQ ++EVPNV W+DIGG +E+KL+++Q+V WP KHPEAF R GI PP GIL++GPPGCSK
Sbjct: 447 RQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSK 506
Query: 286 TMIAKALATESKLNFISVK 304
T+IA+ALA+E+K+NF++VK
Sbjct: 507 TLIARALASEAKMNFLAVK 525
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/185 (28%), Positives = 89/185 (48%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
A + G+ GIL+YG G KT + +LAS K++ + ++ ++FSK+ G++E ++
Sbjct: 484 AFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRD 543
Query: 64 AFXXXXXXXXXXXXXXXXXXXCTGRNR---SDQERRLLSCLVTQVDRLHELQACVVLLAV 120
F + R S R+L+ L+T++D L E + V+LLA
Sbjct: 544 LFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGVSDRVLAQLLTELDGL-EKSSRVILLAA 602
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T D +D +L PGRLD+ I + +P R AIL K+ + I ++ T G
Sbjct: 603 TNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSG 662
Query: 181 FVGGD 185
+ G +
Sbjct: 663 YSGAE 667
Score = 55 (24.4 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 2 DYALQSNGMKK--CNGILIYGVNGTGKTSLIHSLASHMKVHTVVI 44
DY + K+ C+ +LI+G+ G+GKT L+ +A + T I
Sbjct: 260 DYVISPVRQKESPCS-VLIWGLPGSGKTLLLKEVALVLSGSTTYI 303
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 248 (92.4 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 47/105 (44%), Positives = 71/105 (67%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + + + AL V+PSA R+ V VPNV W+DIG ++++ +L ++ P++
Sbjct: 543 EEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVR 602
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+P+ F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 603 NPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 647
Score = 188 (71.2 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 294 GVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 353
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSL 124
R D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 354 VSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRP 413
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D++D +LR GR D+EI L +P R IL L K+ + D +A +T GFVG
Sbjct: 414 DSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHLAHLTPGFVGA 472
Query: 185 D 185
D
Sbjct: 473 D 473
Score = 179 (68.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 38/93 (40%), Positives = 57/93 (61%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + A+ K A R + ++ NVK+ D+GG D + LK + ++HPE + LG+
Sbjct: 239 DGEIEAVLQKKAKA-RGLEFQISNVKFEDVGGND-MTLKEVCKMLIHMRHPEVYHHLGVV 296
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 297 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 329
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 41/151 (27%), Positives = 75/151 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 617 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 676
Query: 75 XXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS 130
C RSD+E R+++ L+T++D L Q V ++A T D +D +
Sbjct: 677 VIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLEARQQ-VFIMAATNRPDIIDPA 733
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTK 161
+ PGRLD+ + + +P R AIL + TK
Sbjct: 734 ILRPGRLDKTLFVGLPPPADRLAILKTI-TK 763
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 245 (91.3 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 41/97 (42%), Positives = 67/97 (69%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
++Y + AL V+PSA R+ +P+V W ++G +++++L + P+K PE + ++
Sbjct: 492 ITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKV 551
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
GI P G+LM+GPPGC KT++AKA+A ES+ NFIS+K
Sbjct: 552 GIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIK 588
Score = 197 (74.4 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R++ PN+ S +GG + V +L + + P+ HPE ++ G++PPRG+L++GPPGC K
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 286 TMIAKALATESKLNFISV 303
T IA ALA E K+ FI++
Sbjct: 241 TTIANALAGELKVPFINI 258
Score = 189 (71.6 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G++ G+L+YG G GKT++ ++LA +KV + I + S GE+E +L+ F
Sbjct: 221 STGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFE 280
Query: 67 XXXXXXXXXXXXXXXXXXCTGRN---RSDQERRLLSCLVTQVDRLHELQAC----VVLLA 119
R+ + + E+R+++ L+T +D L L+ VV++
Sbjct: 281 EAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRIVAQLLTLMDEL-TLEKTGGKPVVVIG 339
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFIT 178
T D++D +LR GR D+EI L VP+ +QR +IL + + ++++ +T
Sbjct: 340 ATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLT 399
Query: 179 HGFVGGD 185
G+VG D
Sbjct: 400 PGYVGAD 406
Score = 153 (58.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 37/147 (25%), Positives = 77/147 (52%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L++G G GKT L ++A+ + + + I+ ++ +K+ GE+E ++ F
Sbjct: 558 GVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPC 617
Query: 75 XXXXXXXXXXCTGRNRSDQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
R+ S E R+++ L+T++D L++ + V ++ T D +D ++
Sbjct: 618 IIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKG-VFVIGATNRPDMIDPAML 676
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLL 159
PGRLD+ + + +P+ ++R IL L+
Sbjct: 677 RPGRLDKTLYIELPTPEERLEILKTLV 703
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 245 (91.3 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 41/97 (42%), Positives = 67/97 (69%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
++Y + AL V+PSA R+ +P+V W ++G +++++L + P+K PE + ++
Sbjct: 492 ITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKV 551
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
GI P G+LM+GPPGC KT++AKA+A ES+ NFIS+K
Sbjct: 552 GIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIK 588
Score = 197 (74.4 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R++ PN+ S +GG + V +L + + P+ HPE ++ G++PPRG+L++GPPGC K
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 286 TMIAKALATESKLNFISV 303
T IA ALA E K+ FI++
Sbjct: 241 TTIANALAGELKVPFINI 258
Score = 189 (71.6 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G++ G+L+YG G GKT++ ++LA +KV + I + S GE+E +L+ F
Sbjct: 221 STGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFE 280
Query: 67 XXXXXXXXXXXXXXXXXXCTGRN---RSDQERRLLSCLVTQVDRLHELQAC----VVLLA 119
R+ + + E+R+++ L+T +D L L+ VV++
Sbjct: 281 EAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRIVAQLLTLMDEL-TLEKTGGKPVVVIG 339
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFIT 178
T D++D +LR GR D+EI L VP+ +QR +IL + + ++++ +T
Sbjct: 340 ATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLT 399
Query: 179 HGFVGGD 185
G+VG D
Sbjct: 400 PGYVGAD 406
Score = 153 (58.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 37/147 (25%), Positives = 77/147 (52%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L++G G GKT L ++A+ + + + I+ ++ +K+ GE+E ++ F
Sbjct: 558 GVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPC 617
Query: 75 XXXXXXXXXXCTGRNRSDQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
R+ S E R+++ L+T++D L++ + V ++ T D +D ++
Sbjct: 618 IIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKG-VFVIGATNRPDMIDPAML 676
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLL 159
PGRLD+ + + +P+ ++R IL L+
Sbjct: 677 RPGRLDKTLYIELPTPEERLEILKTLV 703
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 402 (146.6 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 96/308 (31%), Positives = 155/308 (50%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L + G+ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 216 LAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRV 275
Query: 65 FXXXXXXXX---XXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLA 119
F C R + + E R ++ ++T +D + VV++A
Sbjct: 276 FGRARELASRGPTLLFLDEVDALCPRRGGAHRAPESRAVAQVLTLLDGIRG-DRDVVVVA 334
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +LR PGR D+E+ + P+ QR AIL + +K+P S D + +A +T
Sbjct: 335 STNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVD-LSLLAEMTV 393
Query: 180 GFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGV--MRALDHVKPSAMRQV--LVEVPNV 235
G+VG D + +E + D A ++PS+ R V L+++ V
Sbjct: 394 GYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKKIQPSSFRSVIGLMDIKPV 453
Query: 236 KWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATE 295
W IGG ++VKLKL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 454 DWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATS 513
Query: 296 SKLNFISV 303
+F+SV
Sbjct: 514 CHCSFVSV 521
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLN 299
+GG E LR+ + PL++P A LG+ PRG+L+ GPPG KT + +A+A E+
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 300 FISV 303
++V
Sbjct: 252 LLAV 255
Score = 97 (39.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAE 58
G+ + G+L+YG G KT+L+ +LA+ V + AD+FS F G++E
Sbjct: 486 GLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSE 535
Score = 95 (38.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 32/122 (26%), Positives = 52/122 (42%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQ 173
V+++A T D +D +L PGRLD+ I +P P R +IL +P + D ++
Sbjct: 616 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMP--MGPDVSLEN 673
Query: 174 VAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVP 233
+A T F G D E + + +++L VKPS + L
Sbjct: 674 IAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDLTLYE 733
Query: 234 NV 235
N+
Sbjct: 734 NL 735
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 245 (91.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 47/105 (44%), Positives = 70/105 (66%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + ++ AL V+PSA R+ V VP+V W+DIG ++++ +L ++ P++
Sbjct: 537 EEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVR 596
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
PE F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 597 SPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 641
Score = 188 (71.2 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 52/175 (29%), Positives = 84/175 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 294 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPC 353
Query: 75 XXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSLDNVDVS 130
R D ERR+++ L+T +D L+ A V+++ T D++D +
Sbjct: 354 VLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPA 413
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
LR GR D+EI L +P R IL L K+ T + +A +T GFVG D
Sbjct: 414 LRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPETFPFRHLAHLTPGFVGAD 467
Score = 172 (65.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 37/93 (39%), Positives = 55/93 (59%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + + H K A + + ++V VK+ D+GG D LK + ++HPE + LG
Sbjct: 233 DGEIEGVLHKKAKA-KGLELQVSRVKFEDVGGNDAT-LKEVCKMLIHMRHPEVYHHLGAV 290
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 291 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 323
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 605 GLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 664
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSL 124
C RSD+E R+++ L+T++D L Q V ++A T
Sbjct: 665 RSSAPCVIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLEARQQ-VFIMAATNRP 721
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTK 161
D +D ++ PGRLD+ + + +P R AIL + TK
Sbjct: 722 DIIDPAILRPGRLDKTLFVGLPPPADRLAILKTI-TK 757
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 245 (91.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 47/105 (44%), Positives = 70/105 (66%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + ++ AL V+PSA R+ V VP+V W+DIG ++++ +L ++ P++
Sbjct: 542 EEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVR 601
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
PE F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 602 SPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 646
Score = 188 (71.2 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 52/175 (29%), Positives = 84/175 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 294 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPC 353
Query: 75 XXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSLDNVDVS 130
R D ERR+++ L+T +D L+ A V+++ T D++D +
Sbjct: 354 VLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPA 413
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
LR GR D+EI L +P R IL L K+ T + +A +T GFVG D
Sbjct: 414 LRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPETFPFRHLAHLTPGFVGAD 467
Score = 172 (65.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 37/93 (39%), Positives = 55/93 (59%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + + H K A + + ++V VK+ D+GG D LK + ++HPE + LG
Sbjct: 233 DGEIEGVLHKKAKA-KGLELQVSRVKFEDVGGNDAT-LKEVCKMLIHMRHPEVYHHLGAV 290
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 291 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 323
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 610 GLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSL 124
C RSD+E R+++ L+T++D L Q V ++A T
Sbjct: 670 RSSAPCVIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLEARQQ-VFIMAATNRP 726
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTK 161
D +D ++ PGRLD+ + + +P R AIL + TK
Sbjct: 727 DIIDPAILRPGRLDKTLFVGLPPPADRLAILKTI-TK 762
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 234 (87.4 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 41/90 (45%), Positives = 62/90 (68%)
Query: 215 RALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRG 274
+AL V P+A R+ +PNV W D+G V+ +L S+ P+++P+ + +GI P G
Sbjct: 543 KALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAG 602
Query: 275 ILMFGPPGCSKTMIAKALATESKLNFISVK 304
+LM+GPPGC KT++AKA+A+E + NFISVK
Sbjct: 603 VLMYGPPGCGKTLLAKAIASECQANFISVK 632
Score = 193 (73.0 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 57/229 (24%), Positives = 103/229 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++AS + + + ++ ++ +K+ GE+E ++ F
Sbjct: 596 GIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRA 655
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSD-----QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R D R+++ L+T++D L E ++ V ++A T
Sbjct: 656 AASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGL-EKRSEVFIIAATNR 714
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT-HGFV 182
D +D ++ PGRLD+ + +P+PS ++R IL L K+P D I+ + H F
Sbjct: 715 PDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFS 774
Query: 183 GGDXXXX---XXXXXXXXXVETEGTG-QVLSYDGVMRALDHVKPSAMRQ 227
G D + T ++ + + AL +KPS R+
Sbjct: 775 GADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDFIFALSKIKPSVSRK 823
Score = 191 (72.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 30/72 (41%), Positives = 52/72 (72%)
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+P + +S++GG + +R+ +E+P+ HPE ++ LG++PPRGIL+ GP GC KT++AKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 292 LATESKLNFISV 303
+A E K+ ++
Sbjct: 270 IAGELKVPLFAI 281
Score = 115 (45.5 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ GIL++G +G GKT L ++A +KV I ++ S GE+E R++ F
Sbjct: 246 GVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNA 305
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQA 113
R + D ERR++S L+T +D L+ L +
Sbjct: 306 IAQAPCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSS 352
Score = 106 (42.4 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQV 174
V+++ T +++D +LR GR D+EI L +P + R IL + +K+ + D +++
Sbjct: 403 VIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDY-EEI 461
Query: 175 AFITHGFVGGD 185
A +T G+VG D
Sbjct: 462 ATLTPGYVGAD 472
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 402 (146.6 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 96/308 (31%), Positives = 155/308 (50%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L + G+ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 260 LAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRV 319
Query: 65 FXXXXXXXX---XXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLA 119
F C R + + E R ++ ++T +D + VV++A
Sbjct: 320 FGRARELASRGPTLLFLDEVDALCPRRGGAHRAPESRAVAQVLTLLDGIRG-DRDVVVVA 378
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +LR PGR D+E+ + P+ QR AIL + +K+P S D + +A +T
Sbjct: 379 STNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVD-LSLLAEMTV 437
Query: 180 GFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGV--MRALDHVKPSAMRQV--LVEVPNV 235
G+VG D + +E + D A ++PS+ R V L+++ V
Sbjct: 438 GYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKKIQPSSFRSVIGLMDIKPV 497
Query: 236 KWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATE 295
W IGG ++VKLKL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 498 DWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATS 557
Query: 296 SKLNFISV 303
+F+SV
Sbjct: 558 CHCSFVSV 565
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLN 299
+GG E LR+ + PL++P A LG+ PRG+L+ GPPG KT + +A+A E+
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 300 FISV 303
++V
Sbjct: 296 LLAV 299
Score = 104 (41.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ + G+L+YG G KT+L+ +LA+ V + AD+FS F G++E L F
Sbjct: 530 GLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQA 589
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQE----RRLLSCLVTQVD 106
R+ S E R+LS L+ ++D
Sbjct: 590 RANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVLLNELD 631
Score = 95 (38.5 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 32/122 (26%), Positives = 52/122 (42%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQ 173
V+++A T D +D +L PGRLD+ I +P P R +IL +P + D ++
Sbjct: 658 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMP--MGPDVSLEN 715
Query: 174 VAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVP 233
+A T F G D E + + +++L VKPS + L
Sbjct: 716 IAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDLTLYE 775
Query: 234 NV 235
N+
Sbjct: 776 NL 777
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 97/309 (31%), Positives = 156/309 (50%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
AL + G+ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 218 ALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRR 277
Query: 64 AFXXXXXXXX---XXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLL 118
F C R + E R+++ ++T +D +H + VV++
Sbjct: 278 VFQRAQELASRGPSLLFLDEVDALCPRRGGPQRAPESRVVAQVLTLLDGIHGDRE-VVVV 336
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D +LR PGR D+E+ + P+ QR AIL + +K+P S D + +A +T
Sbjct: 337 GATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKMPISSHID-LGLLAEMT 395
Query: 179 HGFVGGDXXXXXXXXXXXXXVETEGT--GQVLSYDGVMRALDHVKPSAMRQV--LVEVPN 234
G+VG D ++ E + + A V+PS+ R L ++
Sbjct: 396 VGYVGADLTALCREAATCALLKNEKNQNNPKIEETDFLEAFKKVQPSSFRSSIGLTDIRP 455
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V W IGG ++VKLKL+Q VEWPLK P+ FAR+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 456 VGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALAT 515
Query: 295 ESKLNFISV 303
+F+SV
Sbjct: 516 SCHCSFVSV 524
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLN 299
+GG E LR+ + PL +P A A LG+ PRG+L+ GPPG KT + +A+A E+
Sbjct: 195 LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 254
Query: 300 FISV 303
++V
Sbjct: 255 LLAV 258
Score = 102 (41.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 111 LQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQ 170
L V+++ T D +D +L PGRLD+ + +P P R+ R +IL +P L+
Sbjct: 613 LSRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVS- 671
Query: 171 IQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPS 223
++ +A T F G D E + + AL VKPS
Sbjct: 672 LENLAAETCYFSGADLRNLCKEAALFALQENGLEATTVEQEHFTEALKTVKPS 724
Score = 101 (40.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 28/102 (27%), Positives = 45/102 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ + G+L+YG G KT+L+ +LA+ V + AD+FS F G++E L F
Sbjct: 489 GLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQA 548
Query: 69 XXXXXXXXXX----XXXXXXCTGRNRSDQERRLLSCLVTQVD 106
G + D R+LS L+ ++D
Sbjct: 549 RANTPALVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNELD 590
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 245 (91.3 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 48/105 (45%), Positives = 71/105 (67%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + + + AL V+PSA R+ V VPNV W+DIG ++++ +L ++ P++
Sbjct: 542 EEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVR 601
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+P+ F LG+ P GIL+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 602 NPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVK 646
Score = 187 (70.9 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 53/184 (28%), Positives = 87/184 (47%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 290 QHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELF 349
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVT 121
R D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 350 DQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGAT 409
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
D++D +LR GR D+E+ L +P R IL L K+ T +A +T GF
Sbjct: 410 NRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKL-RLPETFNFCHLAHLTPGF 468
Query: 182 VGGD 185
VG D
Sbjct: 469 VGAD 472
Score = 186 (70.5 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 204 TGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEA 263
T + DG + AL K A R +++ NVK+ D+GG D LK + ++HPE
Sbjct: 231 TENLQEVDGEIEALLQKKAKA-RSTELQISNVKFEDVGGNDAT-LKEVCKMLIHMRHPEV 288
Query: 264 FARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ LG+ PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 289 YQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 328
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 43/151 (28%), Positives = 75/151 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 616 GILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 675
Query: 75 XXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS 130
C RSD+E R+++ L+T++D L Q V +LA T D +D +
Sbjct: 676 VIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLETRQQ-VFILAATNRPDIIDPA 732
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTK 161
+ PGRLD+ + + +P R AIL + TK
Sbjct: 733 ILRPGRLDKTLFVGLPPPADRVAILKTI-TK 762
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 231 (86.4 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 41/89 (46%), Positives = 64/89 (71%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
A+ ++PSA R+ + VP+ W DIG ++++ +L+ +V P+K+PE RLG+ P G+
Sbjct: 640 AIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGV 699
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L+ GPPGC KT++AKA+A E+ +NFISVK
Sbjct: 700 LLCGPPGCGKTLLAKAIANEAGINFISVK 728
Score = 202 (76.2 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 58/185 (31%), Positives = 90/185 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L++G G GKT L +++ +K+ + I ++ GE+E R++ F
Sbjct: 280 GLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQA 339
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQERRLLSCLVTQVDRL--HELQACVVLLAVTT 122
G NR D ERR++S L++ +D L +E VV++A TT
Sbjct: 340 IGYSPCVLFIDEIDAI--GGNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATT 397
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILH--CLLTKVPHSLSTDQIQQVAFITHG 180
D +D LR GR D EI + +PSR +R IL C V L+ D+I + +T G
Sbjct: 398 RPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAE---LTPG 454
Query: 181 FVGGD 185
+VG D
Sbjct: 455 YVGAD 459
Score = 171 (65.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 56/251 (22%), Positives = 112/251 (44%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L+ G+ +G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++A
Sbjct: 688 LERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRAC 747
Query: 65 FXXXXXXXXXXXXXXXXXXXCT----GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAV 120
F C G + ++ R+++ L+T++D + E + V +LA
Sbjct: 748 FQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKG-VYILAA 806
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQ--QVAFIT 178
T D +D ++ PGRLD + + P + +R IL + D + ++A T
Sbjct: 807 TNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQT 866
Query: 179 HGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWS 238
G+ G D ++ G D +R+ H + A++Q+ P+V
Sbjct: 867 EGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLCVRS-QHFQ-EALQQLR---PSVNEQ 921
Query: 239 DIGGQDEVKLK 249
D D+++LK
Sbjct: 922 DRKIYDKLRLK 932
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + V+ P + DIGG D +L + + +K PE + +LG+ P RG+L+ GPPGC K
Sbjct: 239 RDLEVQHPTESFRDIGGMDSTLKELCEMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGK 297
Query: 286 TMIAKALATESKLNFISV 303
T +A+A++ + K+ + +
Sbjct: 298 TFLARAISGQLKMPLMEI 315
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 244 (91.0 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 45/89 (50%), Positives = 65/89 (73%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
AL V+PSA R+ V +P+V W+DIG ++V+ +L ++ P+++PE F LG+ P G+
Sbjct: 559 ALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGV 618
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 619 LLAGPPGCGKTLLAKAVANESGLNFISVK 647
Score = 183 (69.5 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G L++G G GKT L ++A +++ + + +M S GE+E +L+ F
Sbjct: 289 GVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQA 348
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSL 124
R D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 349 VLNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRP 408
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D++D +LR GR D+EI L +P R IL L K+ S D + +A +T G+VG
Sbjct: 409 DSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKLKLPGSFDFLH-LAHLTPGYVGA 467
Query: 185 D 185
D
Sbjct: 468 D 468
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P+VK+ D+GG DE LK + ++HPE + LG+ PPRG L+ GPPGC KT++A+A+
Sbjct: 255 PSVKFEDVGGNDET-LKEICKMLIHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 293 ATESKLNFISV 303
A E +L + V
Sbjct: 314 AGELELPMLKV 324
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 46/176 (26%), Positives = 88/176 (50%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 611 GLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 670
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSL 124
C RSD+E R+++ L+T++D L Q V ++A T
Sbjct: 671 RNSAPCVIFFDEVDALCP--RRSDRESGASVRVVNQLLTEMDGLENRQQ-VFIMAATNRP 727
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLL---TKVPHSLSTD-QIQQVAF 176
D +D ++ PGRLD+ + + +P + R AIL + T+ P L TD ++++A+
Sbjct: 728 DIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPP--LDTDVNLEEIAY 781
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 233 (87.1 bits), Expect = 6.9e-36, Sum P(2) = 6.9e-36
Identities = 46/105 (43%), Positives = 69/105 (65%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + + + AL V+PSA R+ VPNV W+DIG ++++ +L ++ + L
Sbjct: 542 EEQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILFLLC 601
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+P+ F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 602 NPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 646
Score = 193 (73.0 bits), Expect = 6.9e-36, Sum P(2) = 6.9e-36
Identities = 52/175 (29%), Positives = 85/175 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F
Sbjct: 299 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPC 358
Query: 75 XXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSLDNVDVS 130
R D ERR+++ L+T +D L+ + A V+++ T D++D +
Sbjct: 359 ILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 418
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
LR GR D+EI L +P R IL L K+ T + +A +T GFVG D
Sbjct: 419 LRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPETFHFRHLAHLTPGFVGAD 472
Score = 168 (64.2 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + A+ + A + + +++ +VK+ D+GG D LK + ++HPE + LG+
Sbjct: 238 DGEIEAVLQKRAKA-KGLELQISSVKFEDVGGNDTT-LKEVCKMLVHMRHPEVYHHLGVI 295
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 296 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 328
Score = 134 (52.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 38/149 (25%), Positives = 73/149 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 616 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 675
Query: 75 XXXXXXXXXXCTGRNRSDQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
C R+ + R+++ L+T++D L Q V ++A T D +D ++
Sbjct: 676 VIFFDEVDALCPRRSARETGASVRVVNQLLTEMDGLETRQQ-VFIMAATNRPDIIDPAIL 734
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTK 161
PGRLD+ + + +P R AIL + TK
Sbjct: 735 RPGRLDKTLFVGLPPPADRLAILKTI-TK 762
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 91/274 (33%), Positives = 148/274 (54%)
Query: 48 DMFSKFYGEAEFRLKAAFXXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQV 105
++ SK GE+E L+ AF R ++ + ERR++S L+T +
Sbjct: 5 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 64
Query: 106 DRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHS 165
D L + +A V+++A T +++D +LR GR D+E+++ +P R IL + TK
Sbjct: 65 DGLKQ-RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMK 121
Query: 166 LSTD-QIQQVAFITHGFVGGDXXXXXXXXXXXX-------------XVETEGTGQV-LSY 210
L+ D ++QV THG VG D ++ E + ++
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTM 181
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
D AL PSA+R+ +VEVP V W DIGG ++VK +L++ V++P++HP+ F + G+
Sbjct: 182 DDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT 241
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
P +G+L +GPPGC KT++AKA+A E + NFIS+K
Sbjct: 242 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 275
Score = 185 (70.2 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 239 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 298
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 299 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 357
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 358 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LDFLAKMTNGFSG 416
Query: 184 GD 185
D
Sbjct: 417 AD 418
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 388 (141.6 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 94/307 (30%), Positives = 154/307 (50%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G+ G+L+ G G GKT L+ ++A + + + GE E ++ F
Sbjct: 228 SLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQ 287
Query: 67 XXXXXXX---XXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVT 121
C R Q E R+++ ++T +D + + VV++ T
Sbjct: 288 RAQELAGRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGISGDRE-VVVVGST 346
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
D +D +LR PGR D+E+ + P+ QR AIL + +K+P S D + +A +T G+
Sbjct: 347 NRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVD-LSLLAEMTVGY 405
Query: 182 VGGDXXXXXXXXXXXXXVETEGTGQ---VLSYDGVMRALDHVKPSAMRQV--LVEVPNVK 236
VG D + + G Q ++ + A ++PS+ R V L++V +
Sbjct: 406 VGADLTALCREAAMHALLHS-GKNQDNPLIDEIDFLEAFKKIQPSSFRSVIGLMDVKPIT 464
Query: 237 WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
W IGG ++ K KL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 465 WEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 524
Query: 297 KLNFISV 303
+F+SV
Sbjct: 525 HCSFVSV 531
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLN 299
+GG E LR+ + PL +P +FA LG+ PRG+L+ GPPG KT + +A+A E+
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 300 FISV 303
++V
Sbjct: 262 LLAV 265
Score = 102 (41.0 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ + G+L+YG G KT+L+ +LA+ V + AD+FS F G++E L F
Sbjct: 496 GLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQA 555
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQERRLLSCLVTQVD 106
R+ S + + R+LS L+ ++D
Sbjct: 556 RANTPAVVFLDEIDSILGSRSISKTGCNVQERVLSVLLNELD 597
Score = 96 (38.9 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 35/132 (26%), Positives = 55/132 (41%)
Query: 109 HELQAC----VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPH 164
HE Q V+++A T D +D +L PGRLD+ I +P P R +IL +P
Sbjct: 614 HEFQEVFNSNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMP- 672
Query: 165 SLSTD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPS 223
+ D ++ +A T F G D E + + +++L VKPS
Sbjct: 673 -VGPDVSLENLAAETCLFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPS 731
Query: 224 AMRQVLVEVPNV 235
+ L N+
Sbjct: 732 LSHKDLALYKNL 743
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 235 (87.8 bits), Expect = 9.1e-35, Sum P(2) = 9.1e-35
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 214 MRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPR 273
+ AL V+PS+ R+ VP V W++IG ++++L+ ++ P+K PE + +GI P
Sbjct: 468 IEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPT 527
Query: 274 GILMFGPPGCSKTMIAKALATESKLNFISVK 304
G+L++GPPGC KT++AKA+A ESK NFIS++
Sbjct: 528 GVLLWGPPGCGKTLLAKAVANESKANFISIR 558
Score = 193 (73.0 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 231 EVPN-VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIA 289
E P+ + SDIGG D+ +L + V P+KHPE + GI PPRG+L+ GPPGC KTM+A
Sbjct: 166 EPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLA 225
Query: 290 KALATESKLNFISV 303
ALA E + FIS+
Sbjct: 226 NALANELGVPFISI 239
Score = 179 (68.1 bits), Expect = 9.1e-35, Sum P(2) = 9.1e-35
Identities = 55/186 (29%), Positives = 90/186 (48%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L++G G GKT L ++LA+ + V + I + S GE+E +++ F
Sbjct: 201 QYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVF 260
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQAC---VVLLAV 120
R + + ERR+++ +T +D L + V+++
Sbjct: 261 EEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGA 320
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITH 179
T D++D +LR GR D+EI L VPS+D R IL + + LS D +Q+A T
Sbjct: 321 TNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGL--KLSGDFDFRQLAKQTP 378
Query: 180 GFVGGD 185
G+VG D
Sbjct: 379 GYVGAD 384
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 43/160 (26%), Positives = 81/160 (50%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
QS G+ G+L++G G GKT L ++A+ K + + I+ ++ +K+ GE+E ++ F
Sbjct: 519 QSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVF 578
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRSDQER--RLLSCLVTQVDRLHELQACVVLLAVTTS 123
R+ S E R+++ L+T++D L + ++ V ++A T
Sbjct: 579 LRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSD-RSGVYVIAATNR 637
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVP 163
D +D ++ PGRLD+ + + +P +R IL L + P
Sbjct: 638 PDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTP 677
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 248 (92.4 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 47/105 (44%), Positives = 71/105 (67%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E + G + + + AL V+PSA R+ V VPNV W+DIG ++++ +L ++ P++
Sbjct: 267 EEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVR 326
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+P+ F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 327 NPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 371
Score = 157 (60.3 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 51/187 (27%), Positives = 87/187 (46%)
Query: 5 LQSNGMKKCNGILI--YGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLK 62
+Q G++ CNG ++ Y +N G + S + + + + + ++ S GE+E +L+
Sbjct: 13 MQLLGLE-CNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQKLR 71
Query: 63 AAFXXXXXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLL 118
F R D ERR+++ L+T +D L+ + A V+++
Sbjct: 72 ELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 131
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
T D++D +LR GR D+EI L +P R IL L K+ + D +A +T
Sbjct: 132 GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHLAHLT 190
Query: 179 HGFVGGD 185
GFVG D
Sbjct: 191 PGFVGAD 197
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/151 (27%), Positives = 75/151 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 341 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 400
Query: 75 XXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS 130
C RSD+E R+++ L+T++D L Q V ++A T D +D +
Sbjct: 401 VIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLEARQQ-VFIMAATNRPDIIDPA 457
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTK 161
+ PGRLD+ + + +P R AIL + TK
Sbjct: 458 ILRPGRLDKTLFVGLPPPADRLAILKTI-TK 487
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 229 (85.7 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
+L V+PSA R+ VP+V W+D+G +V+ +L ++ P+++PE F LG+ P G+
Sbjct: 498 SLVRVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGL 557
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L+ GPPGC KT++AKA+A S LNFISVK
Sbjct: 558 LLAGPPGCGKTLLAKAVANASGLNFISVK 586
Score = 177 (67.4 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 54/185 (29%), Positives = 87/185 (47%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L++G G GKT L ++A + + I ++ S GE+E +L+ F
Sbjct: 253 QRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELF 312
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHEL--QACVVLLAVT 121
R + D ERR+++ L+T +D L+ + A V+++ T
Sbjct: 313 EQAISSAPCILFIDEIDAITPKRETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGAT 372
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHG 180
D++D +LR GR D+EI L +P R IL L K+ L D + +A +T G
Sbjct: 373 NRPDSLDPALRRAGRFDREICLGIPDEGARMKILKTLCRKI--RLPDDFDFRHLARLTPG 430
Query: 181 FVGGD 185
+VG D
Sbjct: 431 YVGAD 435
Score = 170 (64.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 221 KPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGP 280
K S ++ ++ +VK+ D GG DE ++ + + ++HPE + RLG+ PPRG L+ GP
Sbjct: 210 KKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFLLHGP 268
Query: 281 PGCSKTMIAKALATESKLNFISV 303
PGC KT++A+A+A E+ L + +
Sbjct: 269 PGCGKTLLAQAVAGETALPLLKI 291
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 45/184 (24%), Positives = 88/184 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 550 GLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQRG 609
Query: 69 XXXXXXXXXXXXXXXXCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
C R+ S R+++ L+T++D + E + V ++A T D
Sbjct: 610 RNSAPCVIFFDEIDALCPRRSEHESGASVRVVNQLLTEMDGM-ENRRQVFIMAATNRPDI 668
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTK--VPHSLSTD-QIQQVAFITH--GF 181
+D ++ PGRLD+ + + +P R AIL+ + TK L +D ++++A F
Sbjct: 669 IDPAVLRPGRLDKTLYVGLPPAADRHAILNTI-TKGGTKPQLDSDVSLEEIAHDARCETF 727
Query: 182 VGGD 185
G D
Sbjct: 728 TGAD 731
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 243 (90.6 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 50/106 (47%), Positives = 71/106 (66%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E G G +S++ RAL ++P+A R+ VP+V W DIG EV+ +L S+ +P+K
Sbjct: 496 ELNG-GLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIK 554
Query: 260 HPEAFARLGIK-PPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+ FA LGI P+GIL+ GPPGC KT++AKA+A E+ +NFISVK
Sbjct: 555 RADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVK 600
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
+VK+ IGG D L++ + + LK P+ FA LG+ PPRG ++ GPPGC KTM A+A+A
Sbjct: 202 HVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 294 TE 295
E
Sbjct: 261 GE 262
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 570 GILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPC 629
Query: 75 XXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
R+ + RL++ L+T++D + Q V L+ T D VD ++
Sbjct: 630 VIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQK-VFLIGATNRPDIVDAAIL 688
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQ--QVAFITH--GFVGGD 185
PGRLD+ + + PS + R IL + + I ++A + GF G D
Sbjct: 689 RPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGAD 745
Score = 102 (41.0 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 113 ACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QI 171
A V+++ T+ D VD LR GR + EI L +P R IL + KV +L+ D +
Sbjct: 369 AGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILE-KICKV--NLAGDVTL 425
Query: 172 QQVAFITHGFVGGD 185
+Q+A +T G+VG D
Sbjct: 426 KQIAKLTPGYVGAD 439
Score = 77 (32.2 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 21/102 (20%), Positives = 42/102 (41%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G +++G G GKT ++A + + + + ++ S GE E +++ F
Sbjct: 235 GVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTA 294
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRL 108
R + + ERR++S L + +D L
Sbjct: 295 KQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDEL 336
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 243 (90.6 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 50/106 (47%), Positives = 71/106 (66%)
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
E G G +S++ RAL ++P+A R+ VP+V W DIG EV+ +L S+ +P+K
Sbjct: 496 ELNG-GLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIK 554
Query: 260 HPEAFARLGIK-PPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+ FA LGI P+GIL+ GPPGC KT++AKA+A E+ +NFISVK
Sbjct: 555 RADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVK 600
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
+VK+ IGG D L++ + + LK P+ FA LG+ PPRG ++ GPPGC KTM A+A+A
Sbjct: 202 HVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 294 TE 295
E
Sbjct: 261 GE 262
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F
Sbjct: 570 GILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPC 629
Query: 75 XXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
R+ + RL++ L+T++D + Q V L+ T D VD ++
Sbjct: 630 VIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQK-VFLIGATNRPDIVDAAIL 688
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQ--QVAFITH--GFVGGD 185
PGRLD+ + + PS + R IL + + I ++A + GF G D
Sbjct: 689 RPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGAD 745
Score = 102 (41.0 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 113 ACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QI 171
A V+++ T+ D VD LR GR + EI L +P R IL + KV +L+ D +
Sbjct: 369 AGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILE-KICKV--NLAGDVTL 425
Query: 172 QQVAFITHGFVGGD 185
+Q+A +T G+VG D
Sbjct: 426 KQIAKLTPGYVGAD 439
Score = 77 (32.2 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 21/102 (20%), Positives = 42/102 (41%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G +++G G GKT ++A + + + + ++ S GE E +++ F
Sbjct: 235 GVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTA 294
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRL 108
R + + ERR++S L + +D L
Sbjct: 295 KQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDEL 336
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 369 (135.0 bits), Expect = 5.4e-33, P = 5.4e-33
Identities = 83/232 (35%), Positives = 135/232 (58%)
Query: 88 RNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPS 147
+ + ERR++S L+T +D L + +A V+++A T +++D +LR GR D+E+++ +P
Sbjct: 319 QTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 377
Query: 148 RDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGDXXXXXXXXXXXX--------- 197
R IL + TK L+ D ++QVA THG VG D
Sbjct: 378 ATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 435
Query: 198 ----XVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQ 252
++ E + ++ D AL PSA+R+ +VEVP V W DIGG ++VK +L++
Sbjct: 436 LEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQE 495
Query: 253 SVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+A E + NFIS+K
Sbjct: 496 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 547
Score = 206 (77.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 59/184 (32%), Positives = 95/184 (51%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEET 293
Query: 69 XXXXXXXXXX----XXXXXXC--TGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
C + + + ERR++S L+T +D L + +A V+++A T
Sbjct: 294 EKNAPAIIFIDELDAIASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATN 352
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGF 181
+++D +LR GR D+E+++ +P R IL + TK L+ D ++QVA THG
Sbjct: 353 RPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ-IHTK-NMKLADDVDLEQVANETHGH 410
Query: 182 VGGD 185
VG D
Sbjct: 411 VGAD 414
Score = 185 (70.2 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ F
Sbjct: 511 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 570
Query: 69 XXXX--XXXXXXXXXXXXCTGRNRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G N D R+++ ++T++D + + V ++ T
Sbjct: 571 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM-STKKNVFIIGATNR 629
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 630 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LDFLAKMTNGFSG 688
Query: 184 GD 185
D
Sbjct: 689 AD 690
Score = 177 (67.4 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 261 ETGAFFFLI 269
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 239 (89.2 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 46/106 (43%), Positives = 66/106 (62%)
Query: 200 ETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPL 258
E E ++ +S+ AL +KPS + V V NVKW IGG +VK + RQ +EWPL
Sbjct: 447 ENENEKEIKISFKIFKEALKFIKPSTLINFDVTVQNVKWDRIGGYKQVKERFRQLIEWPL 506
Query: 259 KHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
K+ + F RL + G+L+ GP GC K+++ KA+ATE +NFIS+K
Sbjct: 507 KYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIK 552
Score = 186 (70.5 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 48/185 (25%), Positives = 95/185 (51%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+ +G+L++G +G GK+ ++ ++A+ M ++ + I+ +D++SK+ GE+E ++ F
Sbjct: 517 LNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSAR 576
Query: 70 XXXXXXXXXXXXXXXCTGRNRSDQE------RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R D +R+LS L+ ++D + ++++ + L+ T S
Sbjct: 577 LSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGI-QVKSQIFLIGCTNS 635
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQ-----VAFIT 178
+ ++D +L PGR + I + +PS D R IL+ L T + + D+I Q +A T
Sbjct: 636 IQSIDSALLRPGRFESLIHIDLPSLDDRLDILNVLSTN-SLNFNKDEITQQVWLDIATQT 694
Query: 179 HGFVG 183
GF G
Sbjct: 695 SGFTG 699
Score = 106 (42.4 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 22/81 (27%), Positives = 45/81 (55%)
Query: 89 NRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSR 148
N + +++++ L +D + + ++L+ TS++N+D S+ GR+D+ I L +P++
Sbjct: 315 NENSYQKKVIQRLTNFIDHIKSNE---IILSTCTSVENIDQSITRAGRIDKFIHLTIPTQ 371
Query: 149 DQRAAILHCLLTKVPHSLSTD 169
+R IL LL P T+
Sbjct: 372 SKRMLILSNLLKNTPLQYDTN 392
Score = 55 (24.4 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 3 YALQSNGMKKCNGILIYGVNGTGKTSLIHSLA 34
Y+ Q N +K GILI G GT K LI +A
Sbjct: 236 YSNQLNFLKS-KGILIDGPEGTSKLQLIEYIA 266
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 249 (92.7 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 44/97 (45%), Positives = 67/97 (69%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
+++ + +A+ ++P+A R+ VPN WS++G V+ KL ++ P++ PE FA L
Sbjct: 475 ITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFAAL 534
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
GIKP GIL++GPPGC KT++AKA+A SK NFIS+K
Sbjct: 535 GIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIK 571
Score = 188 (71.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 58/225 (25%), Positives = 106/225 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL++G G GKT + ++A+ K + + I+ ++ +K+ GE+E+ ++ F
Sbjct: 535 GIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRA 594
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
R+ S R+++ L+T++D + + Q + ++ T D+
Sbjct: 595 KSSAPCILFFDELDALVPTRDFTMSGATSRVVNALLTELDGVGDRQG-IYVIGATNRPDS 653
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLL-TKVPHSLSTDQ----IQQVAFITH-G 180
+D ++R PGRL +I + +P+ + R IL + T VP + D I++VA G
Sbjct: 654 IDEAIRRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCG 713
Query: 181 -FVGGDXXXXXXXXXXXXXVETEGT-GQVLSYDGVMRALDHVKPS 223
F G D + + ++S + RALD VKPS
Sbjct: 714 KFTGADLRQLLTAASEACMIRVQDDEAPMISEEDWERALDEVKPS 758
Score = 129 (50.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 47/184 (25%), Positives = 84/184 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G K IL++G +GTGKT+++ +LA ++ V + + S GE+E ++ AF
Sbjct: 227 GHKPQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEA 286
Query: 69 XXXX---XXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQAC---VVLLAVTT 122
G ++ E R+ S + +D++ + VV++A T
Sbjct: 287 IRLAPCLLFLDEVDVVAGKMDGAQKA-MEVRMSSEISQGLDKIVRCTSPGRNVVVIAATN 345
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGF 181
D+++ ++R R QE+E+ +P R +IL + LS D +A +T G+
Sbjct: 346 RPDSIEPTVR---RRFQELEMSMPDEAARESILRTMTRN--KRLSDDVDFTALARLTPGY 400
Query: 182 VGGD 185
VG D
Sbjct: 401 VGAD 404
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 236 KWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATE 295
K D+GG ++ L + + PL+ E +AR+G KP IL+ GP G KT + +ALA
Sbjct: 195 KLEDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADT 254
Query: 296 SKLNFISV 303
+ F+ V
Sbjct: 255 LQCAFVPV 262
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 241 (89.9 bits), Expect = 6.7e-30, Sum P(3) = 6.7e-30
Identities = 42/98 (42%), Positives = 70/98 (71%)
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
+L Y +++AL +VKPS M+++ +++P ++ DIGG VK + + + +P K+ + +
Sbjct: 804 LLRYKHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDK 863
Query: 267 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
I+ P+GIL++GPPGCSKT+ AKA+A+E +NFISVK
Sbjct: 864 YNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVK 901
Score = 167 (63.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 45/169 (26%), Positives = 82/169 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+YG G KT ++AS + ++ + ++ ++FSK+ GE+E ++ F
Sbjct: 871 GILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPC 930
Query: 75 XXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
RN + R+L L+ ++D + + V++LA T D +D +L
Sbjct: 931 VIFFDEIDSIAVNRNNNQNFVSNRVLCQLLNEIDGIKN-RLNVIILAATNRPDLIDPALM 989
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLT--KVPHSLSTDQIQQVAFITH 179
PGR D+ I +P+P+ R AIL L K+ + + D+ + + + H
Sbjct: 990 RPGRFDRIIYVPLPNYSSRFAILKKNLKFFKIHNLIEYDKKETINDLNH 1038
Score = 114 (45.2 bits), Expect = 6.7e-30, Sum P(3) = 6.7e-30
Identities = 25/101 (24%), Positives = 50/101 (49%)
Query: 85 CTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELP 144
C R ++ S L+ +D + + +L+ T ++ +D++LR GR D+EIE+
Sbjct: 568 CKKREENNNMNIYTSVLLNNMDGIKK-HTHTILIGATNYINKIDLALRRSGRFDKEIEVN 626
Query: 145 VPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+P+ R +I L + H++ +I ++A + F D
Sbjct: 627 LPNLKDRISIFQKKLNLIKHNIGKKKIHKLADLCQSFTCSD 667
Score = 41 (19.5 bits), Expect = 6.7e-30, Sum P(3) = 6.7e-30
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 15 GILIYGVNGTGKT 27
GIL++G G GKT
Sbjct: 460 GILLHGPPGCGKT 472
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 241 (89.9 bits), Expect = 6.7e-30, Sum P(3) = 6.7e-30
Identities = 42/98 (42%), Positives = 70/98 (71%)
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
+L Y +++AL +VKPS M+++ +++P ++ DIGG VK + + + +P K+ + +
Sbjct: 804 LLRYKHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDK 863
Query: 267 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
I+ P+GIL++GPPGCSKT+ AKA+A+E +NFISVK
Sbjct: 864 YNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVK 901
Score = 167 (63.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 45/169 (26%), Positives = 82/169 (48%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL+YG G KT ++AS + ++ + ++ ++FSK+ GE+E ++ F
Sbjct: 871 GILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPC 930
Query: 75 XXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
RN + R+L L+ ++D + + V++LA T D +D +L
Sbjct: 931 VIFFDEIDSIAVNRNNNQNFVSNRVLCQLLNEIDGIKN-RLNVIILAATNRPDLIDPALM 989
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLT--KVPHSLSTDQIQQVAFITH 179
PGR D+ I +P+P+ R AIL L K+ + + D+ + + + H
Sbjct: 990 RPGRFDRIIYVPLPNYSSRFAILKKNLKFFKIHNLIEYDKKETINDLNH 1038
Score = 114 (45.2 bits), Expect = 6.7e-30, Sum P(3) = 6.7e-30
Identities = 25/101 (24%), Positives = 50/101 (49%)
Query: 85 CTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELP 144
C R ++ S L+ +D + + +L+ T ++ +D++LR GR D+EIE+
Sbjct: 568 CKKREENNNMNIYTSVLLNNMDGIKK-HTHTILIGATNYINKIDLALRRSGRFDKEIEVN 626
Query: 145 VPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+P+ R +I L + H++ +I ++A + F D
Sbjct: 627 LPNLKDRISIFQKKLNLIKHNIGKKKIHKLADLCQSFTCSD 667
Score = 41 (19.5 bits), Expect = 6.7e-30, Sum P(3) = 6.7e-30
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 15 GILIYGVNGTGKT 27
GIL++G G GKT
Sbjct: 460 GILLHGPPGCGKT 472
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 314 (115.6 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 73/196 (37%), Positives = 107/196 (54%)
Query: 113 ACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHS-LSTDQI 171
A VVL+A + D +D LR+P D+E+ LP+P R ++L LL VP L+ D+I
Sbjct: 338 AGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVPTGDLNLDEI 397
Query: 172 QQVAFITHGFVGGDXXXXXXXXX--XXXXVETEGTGQVLSYDGVMRALDHVKP-SAMRQV 228
A T GFV D +G +L D ++ AL ++P S
Sbjct: 398 ---ASRTPGFVVADLAALVREAALRAASRASADGRPPMLHQDDLLGALTVIRPLSRSASD 454
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
V V +V D+G K L ++V WPL+HP+ FARLG++PPRG+L++GPPGC KT +
Sbjct: 455 EVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFV 514
Query: 289 AKALATESKLNFISVK 304
+ALA+ +L+ +VK
Sbjct: 515 VRALASTGQLSVHAVK 530
Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 46/180 (25%), Positives = 84/180 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG G GKT ++ +LAS ++ ++ +++ K+ G +E ++ F
Sbjct: 494 GVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRA 553
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-DQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
R +S D R+++ L+T++D + L+ VV+L T D
Sbjct: 554 RDSAPSLVFLDELDALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRD-VVMLGATNRPD 612
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+D +L PGRL++ + + P R IL +P S D + +VA G+ D
Sbjct: 613 LIDPALLRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVD-LDEVAAGLDGYSAAD 671
Score = 50 (22.7 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 3 YALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTV 42
+ LQ+ G G+L+ G G GK +L+ ++ ++ T+
Sbjct: 237 HLLQTLGAGTNLGVLVSGPAGVGKATLVRAVCDGRRLVTL 276
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 200 (75.5 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 36/89 (40%), Positives = 57/89 (64%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
A++ V+ S R+ VP+VKW D+GG D ++L+ + + P+K P+ + G+ G
Sbjct: 506 AVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGF 565
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L++GPPGC KT+IAKA A E+ NF+ +K
Sbjct: 566 LLYGPPGCGKTLIAKAAANEAGANFMHIK 594
Score = 164 (62.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 62/245 (25%), Positives = 100/245 (40%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G L+YG G GKT + + A+ + + I+ A++ +K+ GE+E ++ F
Sbjct: 564 GFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPC 623
Query: 75 XXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
T R + RLL+ + ++D V ++ T D VD +
Sbjct: 624 VIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERRN--VYVIGATNRPDVVDPAFL 681
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT-HGFVGGDXXXXXX 191
PGR + +P+P+ D+RA+IL + K P S D + +A GF G D
Sbjct: 682 RPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVD-LDGIAKNNCEGFSGADLAHLVQ 740
Query: 192 XXXXXXXVETEGTGQVLSYDGVMRALD-HVKPSAMRQVLVEV-PNVKWSDIGGQDEVKLK 249
E G+ + S D V +K Q L V P+V D + K
Sbjct: 741 KATFQAVEEMIGSSES-SEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALSTK 799
Query: 250 LRQSV 254
L++SV
Sbjct: 800 LQESV 804
Score = 161 (61.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 230 VEVPNVK---WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
+EV K + D GG ++ +L +V +P+ +PE F ++G+KPP GIL GPPGC KT
Sbjct: 222 LEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKT 281
Query: 287 MIAKALATESKLNFISV 303
+A A+A E+ + F +
Sbjct: 282 KLANAIANEAGVPFYKI 298
Score = 153 (58.9 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 52/188 (27%), Positives = 84/188 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K +GIL +G G GKT L +++A+ V I ++ S G +E ++ F
Sbjct: 263 GVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKA 322
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVD--------RLHELQACVVL- 117
+ R + E+R+++ L+T +D + A VL
Sbjct: 323 YRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLV 382
Query: 118 LAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFI 177
+ T D +D +LR GR + EI L P D RA IL + K+ D+ +++A +
Sbjct: 383 IGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK-KRIARL 441
Query: 178 THGFVGGD 185
T GFVG D
Sbjct: 442 TPGFVGAD 449
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 224 (83.9 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
D + AL ++P+AM+ V ++ P V+W DI GQ+ VK LR +V + + E +
Sbjct: 456 DSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVHFITRPKEEIQKFIRV 515
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
PP+G L++GPPGCSKTM A+A+ATES LNF +VK
Sbjct: 516 PPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVK 549
Score = 58 (25.5 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 2 DYALQSNGMKKCN----GILIYGVNGTGKTSLI-H-SLASHMKVHTVVIQ-----VADMF 50
D+ L S+ ++ N G++++G +GTGKT L+ H S VH V + D+F
Sbjct: 229 DFLLVSSSDRESNTGWHGLVLHGGSGTGKTMLLDHVSRTRWGSVHRVKASDKSKDIQDIF 288
Query: 51 SKFYGEA 57
G+A
Sbjct: 289 QTVTGQA 295
Score = 56 (24.8 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQV 174
+V+ A + V LR P RL + I LP +R A++ L + I +
Sbjct: 343 IVIAACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAVISSLNPPFHPDVKEQIICDL 402
Query: 175 AFITHGFVGGD 185
+ TH + G D
Sbjct: 403 SDRTHAYNGLD 413
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 287 (106.1 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 83/309 (26%), Positives = 145/309 (46%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+ +L+ G G GKT+++ + SH+ +H + + + + ++ G E +L+A F
Sbjct: 464 SSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRP 523
Query: 74 XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRT 133
R+ ++ R+++ L + L +C L+ V T+ D+
Sbjct: 524 AVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADV 583
Query: 134 PGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXX 193
E+E+P S QR +IL L +P + + Q+A GFV GD
Sbjct: 584 QTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVN-LAQLARRCAGFVVGDLYALLTHS 642
Query: 194 XXXXXV-------------ETEG----TGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNV 235
E EG G L + +AL+ ++ + + V ++P+V
Sbjct: 643 SRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKIPSV 702
Query: 236 KWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATE 295
W D+GG EVK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 703 SWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATE 760
Query: 296 SKLNFISVK 304
L F+SVK
Sbjct: 761 CSLTFLSVK 769
Score = 136 (52.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 5 LQSNG--MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLK 62
LQ G + + +L+ G G GKT+++ + SH+ +H + + + + ++ G E +L+
Sbjct: 453 LQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQ 512
Query: 63 AAFXXXXXXXXXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
A F R+ ++ R+++ L + L +C L+ V T
Sbjct: 513 AIFSRARRCRPAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVAT 572
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+ D+ E+E+P S QR +IL L +P + + Q+A GFV
Sbjct: 573 TSRAQDLPADVQTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVN-LAQLARRCAGFV 631
Query: 183 GGD 185
GD
Sbjct: 632 VGD 634
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 730 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 788
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 789 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 847
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + V + + RA+ L L
Sbjct: 848 TNRPDLLDPALLRPGRFDKLVF--VGANEDRASQLRVL 883
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 282 (104.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 81/309 (26%), Positives = 144/309 (46%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+ +L+ G G+GKT+ + + S + +H + + + + + G E +L+A F
Sbjct: 464 SSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRP 523
Query: 74 XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRT 133
R+ ++ R+++ L + L +C L+ V T+ D+
Sbjct: 524 VVLLLTAVDLLGRNRDGLGEDARVVATLCHLLQDEDPLTSCPPLMVVATTSQAQDLPADV 583
Query: 134 PGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXX 193
E+E+PV S QR ++L L +P + + Q+A GFV GD
Sbjct: 584 QTAFPHELEVPVLSEGQRLSVLQALTAHLPLGQEVN-LTQLARRCAGFVVGDLYALLTHS 642
Query: 194 XXXXXV-------------ETEG----TGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNV 235
E EG G L + +AL+ ++ + + + ++P+V
Sbjct: 643 SRVACTRIKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAPKIPSV 702
Query: 236 KWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATE 295
W D+GG EVK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 703 SWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATE 760
Query: 296 SKLNFISVK 304
L F+SVK
Sbjct: 761 CSLTFLSVK 769
Score = 135 (52.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 5 LQSNG--MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLK 62
LQ G + + +L+ G G+GKT+ + + S + +H + + + + + G E +L+
Sbjct: 453 LQPGGALLTGTSSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQ 512
Query: 63 AAFXXXXXXXXXXXXXXXXXXXCTGRNRSD--QERRLLSCLVTQVDRLHELQACVVLLAV 120
A F GRNR ++ R+++ L + L +C L+ V
Sbjct: 513 ATFSRARRCRPVVLLLTAVDLL--GRNRDGLGEDARVVATLCHLLQDEDPLTSCPPLMVV 570
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T+ D+ E+E+PV S QR ++L L +P + + Q+A G
Sbjct: 571 ATTSQAQDLPADVQTAFPHELEVPVLSEGQRLSVLQALTAHLPLGQEVN-LTQLARRCAG 629
Query: 181 FVGGD 185
FV GD
Sbjct: 630 FVVGD 634
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/158 (25%), Positives = 77/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 730 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 788
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R R+ R++S L+ ++D LH Q V ++
Sbjct: 789 FARARAAAPCIIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 847
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + + V S D RA+ L L
Sbjct: 848 TNRPDLLDPALLRPGRFDKLVFVGV-SED-RASQLRVL 883
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+L+ D +++A ++PS Q L+ ++
Sbjct: 945 LLTMDDLLQAAARLQPSVSEQELLRYKRIQ 974
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 271 (100.5 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 83/310 (26%), Positives = 144/310 (46%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+ +L+ G G GKT+++ + S + +H + + + + + G E +L+A F
Sbjct: 54 SSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRP 113
Query: 74 XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRT 133
R+ ++ R+++ L + L +C L+ V T+ D+
Sbjct: 114 AVLLLTAVDLLGRDRDGLGEDARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDLPADV 173
Query: 134 PGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXX 193
E+E+P S QR +IL L +P + + Q+A GFV GD
Sbjct: 174 QTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVN-LAQLARRCAGFVVGDLYALLTHS 232
Query: 194 XXXXXV-------------ETEG----TGQVLSYDGVMRALDHVKPSAMRQVL--VEVPN 234
E EG G L + +AL+ ++ +A Q + ++P+
Sbjct: 233 SRAACTRIKNLGLAGGLTEEDEGELCAAGFPLLAEDFGQALE-LQQTAHSQAVGAPKIPS 291
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V W D+GG EVK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+AT
Sbjct: 292 VSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVAT 349
Query: 295 ESKLNFISVK 304
E L F+SVK
Sbjct: 350 ECSLTFLSVK 359
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 320 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 378
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 379 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 437
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + V + + RA+ L L
Sbjct: 438 TNRPDLLDPALLRPGRFDKLVF--VGANEDRASQLRVL 473
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 273 (101.2 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 81/307 (26%), Positives = 146/307 (47%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXX 75
+L+ G G+GKT+ + + S + +H + + + + + E +L+ F
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525
Query: 76 XXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAV-TTS-LDNVDVSLRT 133
R+ ++ R+++ L + L C L+ V TTS + ++ +RT
Sbjct: 526 LLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDVRT 585
Query: 134 PGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXX 193
E+E+PV S QR ++L L +P + + Q+A GFV GD
Sbjct: 586 A--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVN-LSQLARRCAGFVVGDLYALLTHA 642
Query: 194 XXXXXVETEGTGQVLSYD--GVM-------------RALDHVKPSAMRQV-LVEVPNVKW 237
+ G +S + G + +ALD ++ + + V ++P+V W
Sbjct: 643 SRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSW 702
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESK 297
D+GG +VK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 703 HDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECS 760
Query: 298 LNFISVK 304
L F+SVK
Sbjct: 761 LTFLSVK 767
Score = 130 (50.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 728 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 786
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 787 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 845
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + V + + RA+ L L
Sbjct: 846 TNRPDLLDPALLRPGRFDKLVF--VGASEDRASQLRVL 881
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/38 (18%), Positives = 20/38 (52%)
Query: 199 VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+E + +L+ + +++A ++PS Q L+ ++
Sbjct: 935 LEPRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQ 972
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 273 (101.2 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 81/307 (26%), Positives = 146/307 (47%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXX 75
+L+ G G+GKT+ + + S + +H + + + + + E +L+ F
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525
Query: 76 XXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAV-TTS-LDNVDVSLRT 133
R+ ++ R+++ L + L C L+ V TTS + ++ +RT
Sbjct: 526 LLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDVRT 585
Query: 134 PGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXX 193
E+E+PV S QR ++L L +P + + Q+A GFV GD
Sbjct: 586 A--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVN-LSQLARRCAGFVVGDLYALLTHA 642
Query: 194 XXXXXVETEGTGQVLSYD--GVM-------------RALDHVKPSAMRQV-LVEVPNVKW 237
+ G +S + G + +ALD ++ + + V ++P+V W
Sbjct: 643 SRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSW 702
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESK 297
D+GG +VK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 703 HDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECS 760
Query: 298 LNFISVK 304
L F+SVK
Sbjct: 761 LTFLSVK 767
Score = 130 (50.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 728 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 786
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 787 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 845
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + V + + RA+ L L
Sbjct: 846 TNRPDLLDPALLRPGRFDKLVF--VGASEDRASQLRVL 881
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/38 (18%), Positives = 20/38 (52%)
Query: 199 VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+E + +L+ + +++A ++PS Q L+ ++
Sbjct: 935 LEPRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQ 972
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 273 (101.2 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 81/307 (26%), Positives = 143/307 (46%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXX 75
+L+ G G+GKT+ + + S + +H + + + + + G E +L+AAF
Sbjct: 466 VLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVV 525
Query: 76 XXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPG 135
R+ ++ R+++ L + L +C L+ V T+ D+
Sbjct: 526 LLLTAVDLLGRDRDGLGEDARVVATLRHLLLDEDPLASCPPLMVVATTSRAQDLPADVQT 585
Query: 136 RLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXXXX 195
E+E+PV + QR ++L L +P + + Q+A GFV GD
Sbjct: 586 AFPHELEVPVLAEAQRLSVLRALTAHLPLGQEVN-LAQLARRCAGFVVGDLFALLTHSSR 644
Query: 196 XXXV-------------ETEG----TGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNVKW 237
E EG G L + +AL+ ++ + + + +P+V W
Sbjct: 645 AACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAPRIPSVSW 704
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESK 297
D+GG EVK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 705 HDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECS 762
Query: 298 LNFISVK 304
L F+SVK
Sbjct: 763 LTFLSVK 769
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 730 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 788
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 789 FARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 847
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + + V + RA+ L L
Sbjct: 848 TNRPDLLDPALLRPGRFDKLVFVGV--NEDRASQLRVL 883
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 210 (79.0 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 40/74 (54%), Positives = 52/74 (70%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
++PNV W DIGG D VK ++ +++ PLKHPE F G+K GIL +GPPG KT++AK
Sbjct: 725 QIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAK 783
Query: 291 ALATESKLNFISVK 304
A+AT LNF SVK
Sbjct: 784 AIATNFSLNFFSVK 797
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L ++GMKK +GIL YG GTGKT + ++A++ ++ ++ ++ + + GE+E ++
Sbjct: 757 LFTSGMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRV 816
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLHELQACVVLLAV 120
F R N+ D R++S L+ ++D + V ++
Sbjct: 817 FQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGA 876
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAA-ILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGR D+ + L +P D + IL L K I+
Sbjct: 877 TNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPF 936
Query: 180 GFVGGD 185
+ G D
Sbjct: 937 NYTGAD 942
Score = 68 (29.0 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQV 174
++DNV S R+ R EI +PVPS QR I L+ H L+ D Q+V
Sbjct: 598 NIDNVPSSFRSHMRF--EILVPVPSEAQRLRIFQWYLSS--HELNRDVQQKV 645
Score = 40 (19.1 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 7/37 (18%), Positives = 19/37 (51%)
Query: 16 ILIYGV-NGTGKTSLIHSLASHMKVHTVVIQVADMFS 51
+L++ N GK +++ + ++ +H + I + S
Sbjct: 478 VLLHSTTNNVGKATMVRFASKYLGIHLLEIDCLSLTS 514
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 267 (99.0 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 82/307 (26%), Positives = 143/307 (46%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXX 75
+L+ G G+GKT+ + + + +H + + + + + G E +L+AAF
Sbjct: 455 VLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVV 514
Query: 76 XXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPG 135
R+ ++ R+++ L + L + L+ V T+ D+
Sbjct: 515 LLLTAVDLLGRDRDGLGEDARVVATLRRLLLDEDPLTSHPPLMVVATTSRAQDLPADVQT 574
Query: 136 RLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXXXX 195
E+E+PV S QR +IL L +P + + Q+A GFV GD
Sbjct: 575 AFPHELEVPVLSEGQRLSILQALTAHLPLGQEVN-LAQLARRCAGFVVGDLYALLTHSSR 633
Query: 196 XXXV-------------ETEG----TGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNVKW 237
E EG G L + + +AL+ ++ + + V ++P+V W
Sbjct: 634 AACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDLGQALEQLQSAHSQAVGAPKIPSVSW 693
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESK 297
D+GG EVK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 694 HDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECS 751
Query: 298 LNFISVK 304
L F+SVK
Sbjct: 752 LTFLSVK 758
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 719 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 777
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 778 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 836
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITH 179
T D +D +L PGR D+ + V + + RA+ L +L+ + + + VA + H
Sbjct: 837 TNRPDLLDPALLRPGRFDKLVF--VGASEDRASQLR-VLSAITRKFRLEPSVSLVAVLDH 893
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 246 (91.7 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 58/203 (28%), Positives = 99/203 (48%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQ---I 171
+V++A S ++ S++ P IEL P+R++R IL L L Q +
Sbjct: 730 IVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGKQLKDQQSLNL 789
Query: 172 QQVAFITHGFVGGDXXXXXXXXXXXXXV-ETEGTGQ---------VLSYDGVMRALDHVK 221
+ + G++G D + E E ++ + + +A +
Sbjct: 790 MKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIEFSIIEKAKEGYT 849
Query: 222 PSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPP 281
P ++ + + +KW DIGG D V+ L++++EWP K+P+ F ++ GIL++GP
Sbjct: 850 PITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPT 909
Query: 282 GCSKTMIAKALATESKLNFISVK 304
GC KT++A A+A E LNFISVK
Sbjct: 910 GCGKTLLASAIAGECGLNFISVK 932
Score = 180 (68.4 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 49/182 (26%), Positives = 91/182 (50%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
QS+ ++ +GIL+YG G GKT L ++A ++ + ++ ++ +K+ G +E ++ F
Sbjct: 893 QSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVF 952
Query: 66 XXXXXXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G + S R+++ +TQ+D + L V +LA T+
Sbjct: 953 SRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTG-VYVLAATSR 1011
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D +L PGRLD+ + +P ++R IL CL +K+ S S ++Q++ T + G
Sbjct: 1012 PDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSIS-LEQLSTNTQYYTG 1070
Query: 184 GD 185
D
Sbjct: 1071 AD 1072
Score = 50 (22.7 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 14 NGILIYGVNGTGKTSLIHSLASH 36
NG++I G +G+GK+ L SL +
Sbjct: 603 NGMIIAGSHGSGKSLLATSLGGY 625
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 264 (98.0 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 82/307 (26%), Positives = 139/307 (45%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXX 75
+L+ G G+GKT+ + + S + +H + + + + + E +L+A F
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526
Query: 76 XXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPG 135
R+ ++ R+ + L + L C L+ V T+ D+
Sbjct: 527 LLLTAVDLLGRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDVQT 586
Query: 136 RLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXX------ 189
E+E+PV S QR +IL L +P + + Q+A GFV GD
Sbjct: 587 AFPHELEVPVLSEAQRLSILQALTAHLPLGQEVN-LPQLARRCAGFVVGDLYALLTHTCR 645
Query: 190 -------XXXXXXXXXVETEG----TGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNVKW 237
E EG G L + +ALD ++ + + V +P+V W
Sbjct: 646 AACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGAPRIPSVSW 705
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESK 297
D+GG +VK ++ ++++ PL+HPE + LG++ G+L+ GPPG KT++AKA+ATE
Sbjct: 706 HDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECS 763
Query: 298 LNFISVK 304
L F+SVK
Sbjct: 764 LTFLSVK 770
Score = 130 (50.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L++G GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 731 LLSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 789
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH Q V ++
Sbjct: 790 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGA 848
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCL 158
T D +D +L PGR D+ + V + + RA+ L L
Sbjct: 849 TNRPDLLDPALLRPGRFDKLVF--VGASEDRASQLRVL 884
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/38 (18%), Positives = 20/38 (52%)
Query: 199 VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+E + +L+ + +++A ++PS Q L+ ++
Sbjct: 938 LELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQ 975
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 219 (82.2 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 43/107 (40%), Positives = 66/107 (61%)
Query: 199 VETEGTGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWP 257
+E G ++ D + ++L ++ + ++PNV W D+GG VK ++ +++ P
Sbjct: 879 IEIYNCGFLVMGDDIQKSLSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLP 938
Query: 258 LKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
L+HP FA GI GIL+FGPPG KT++AKA+ATE LNF+SVK
Sbjct: 939 LEHPHLFAS-GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVK 984
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 42/162 (25%), Positives = 81/162 (50%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L ++G+ K +GIL++G GTGKT L ++A+ ++ + ++ ++ + + GE+E ++
Sbjct: 944 LFASGIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREI 1003
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLHELQACVVLLAV 120
F R N +D R++S L+ ++D + + + V ++
Sbjct: 1004 FNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQK-SSDVFIIGA 1062
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPS-RDQRAAILHCLLTK 161
T D +D SL PGRLD+ + L + S ++ + IL L K
Sbjct: 1063 TNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRK 1104
Score = 70 (29.7 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 31/180 (17%), Positives = 71/180 (39%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXX 75
+L+ G G GK +L++ +A M +H + ++ + ++ ++
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 76 XXXXXXXXXCTGRNRSDQERR---LLSCLVTQVDRLHELQACVVL-----LAVTTSLDNV 127
QE++ L L+ + +++ + L +T +++++
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVTVNSM 789
Query: 128 D-VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSL-STDQIQQVAFITHGFVGGD 185
D +S + EI L P +QR IL L +P + +T I+ ++ T F+ +
Sbjct: 790 DELSNKVRNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTASFLNSN 849
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 231 (86.4 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 64/224 (28%), Positives = 109/224 (48%)
Query: 93 QERRLLSCLVTQVDRLH-ELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQR 151
+ +L ++ + ++H +L + + +L S DN++ L ++ L P + R
Sbjct: 579 KSNQLTEFFISNLTKIHHQLNSNLSILLSANSKDNINKLLLGSHLIENFHHLNPPDKSLR 638
Query: 152 AAILHCLLT-KVPHSLSTDQIQQVAFITHGFVGGDXXXXXX---------XXXXXXXVET 201
IL LT K+ + D + V+ T G++ D ET
Sbjct: 639 FEILDKYLTNKLGLKIKVDLMDLVSE-TEGYLPNDLKILSDRIYHEVLFNSTETETETET 697
Query: 202 EGT-GQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKH 260
E T ++ + + +AL PS +R V ++ ++ WSDIGG E K L +++EWP K+
Sbjct: 698 EATTNAAVTSEHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKY 757
Query: 261 PEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
FA ++ GIL++G PGC KT++A A+A + LNFIS+K
Sbjct: 758 APIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIK 801
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 49/175 (28%), Positives = 86/175 (49%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+GIL+YG G GKT L ++A ++ + I+ ++ +K+ G +E ++ F
Sbjct: 770 SGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKP 829
Query: 74 XXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
G + + R+++ ++TQ+D L V +LA T+ D +D +L
Sbjct: 830 CILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDG-VYVLAATSRPDLIDSAL 888
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
PGRLD+ + +P+ + R IL + TK+ LS D + ++A T GF G D
Sbjct: 889 LRPGRLDKSVICDMPNYEDRLDILQSITTKM--DLSDDVNLHEIAEKTTGFSGAD 941
Score = 54 (24.1 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 15 GILIYGVNGTGKTSLIHSLASHM 37
G L+YG +G+GKT L+ +A +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQL 515
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 231 (86.4 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 64/224 (28%), Positives = 109/224 (48%)
Query: 93 QERRLLSCLVTQVDRLH-ELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQR 151
+ +L ++ + ++H +L + + +L S DN++ L ++ L P + R
Sbjct: 579 KSNQLTEFFISNLTKIHHQLNSNLSILLSANSKDNINKLLLGSHLIENFHHLNPPDKSLR 638
Query: 152 AAILHCLLT-KVPHSLSTDQIQQVAFITHGFVGGDXXXXXX---------XXXXXXXVET 201
IL LT K+ + D + V+ T G++ D ET
Sbjct: 639 FEILDKYLTNKLGLKIKVDLMDLVSE-TEGYLPNDLKILSDRIYHEVLFNSTETETETET 697
Query: 202 EGT-GQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKH 260
E T ++ + + +AL PS +R V ++ ++ WSDIGG E K L +++EWP K+
Sbjct: 698 EATTNAAVTSEHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKY 757
Query: 261 PEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
FA ++ GIL++G PGC KT++A A+A + LNFIS+K
Sbjct: 758 APIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIK 801
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 49/175 (28%), Positives = 86/175 (49%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+GIL+YG G GKT L ++A ++ + I+ ++ +K+ G +E ++ F
Sbjct: 770 SGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKP 829
Query: 74 XXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
G + + R+++ ++TQ+D L V +LA T+ D +D +L
Sbjct: 830 CILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDG-VYVLAATSRPDLIDSAL 888
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
PGRLD+ + +P+ + R IL + TK+ LS D + ++A T GF G D
Sbjct: 889 LRPGRLDKSVICDMPNYEDRLDILQSITTKM--DLSDDVNLHEIAEKTTGFSGAD 941
Score = 54 (24.1 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 15 GILIYGVNGTGKTSLIHSLASHM 37
G L+YG +G+GKT L+ +A +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQL 515
>DICTYBASE|DDB_G0282215 [details] [associations]
symbol:DDB_G0282215 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282215 GO:GO:0005524 GO:GO:0017111
EMBL:AAFI02000046 RefSeq:XP_640290.2 ProteinModelPortal:Q54SU5
EnsemblProtists:DDB0267128 GeneID:8623467 KEGG:ddi:DDB_G0282215
OMA:PNINFIS Uniprot:Q54SU5
Length = 534
Score = 248 (92.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 65/230 (28%), Positives = 121/230 (52%)
Query: 94 ERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAA 153
E+R++S +T ++ + + V ++ VT+ ++++D + + G+ D + LP+PS + R
Sbjct: 114 EQRVVSNFLTLLEN-NSKKRSVFVIGVTSRIESIDTAFFSIGKFDSVLNLPIPSPNDRKE 172
Query: 154 ILHCLLTKVPHSLSTD----QIQQ-VAFITHGFVGGDXXXXXXXXXXXXXVETE--GTGQ 206
IL+ L K P+ + + ++ + + THG+VG D +
Sbjct: 173 ILYLLFKKFPNFKNNEIHYKELSEYLGECTHGYVGSDLNSLCKEAILVNIKRNDCHDYNL 232
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSD------------IGGQDEVKLKLRQSV 254
+ +D +A + VKPS + Q ++P + + D IGG DE+ K++ S+
Sbjct: 233 IEKFD-FNKAFELVKPSILNQY--KLPTIGYGDGGGNGNGNGFNEIGGLDEIIEKIKSSI 289
Query: 255 EWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES-KLNFISV 303
P+ + RLGIK P G+L++GPPG K++IA+A+A+ S +NFIS+
Sbjct: 290 LTPMLNKSVLDRLGIKSPSGVLLYGPPGNGKSLIARAIASSSPNINFISI 339
Score = 177 (67.4 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 54/193 (27%), Positives = 86/193 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHM-KVHTVVIQVADMFSKFYGEAEFRLKAAFXX 67
G+K +G+L+YG G GK+ + ++AS ++ + I D+ G +E L F
Sbjct: 303 GIKSPSGVLLYGPPGNGKSLIARAIASSSPNINFISISSTDIIDPVVGASEKNLSKLFKT 362
Query: 68 XXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLH-----------ELQ 112
R D RLLSCL+T++D ++
Sbjct: 363 LRESSPCILFLDQVEVLAKLRGFDDSSEQSSDRLLSCLLTEIDGIYGGGGSGNNNNNNNS 422
Query: 113 ACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQ 172
++LA TT +D +D S+ PGR D IE+P P+++ R I + +P S D IQ
Sbjct: 423 NQSIVLAATTRIDLLDPSILRPGRFDYHIEIPNPNKEARLDIFKKITKSMPLDESVDFIQ 482
Query: 173 QVAFITHGFVGGD 185
++ +T GF G D
Sbjct: 483 -LSELTQGFNGAD 494
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 213 (80.0 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 38/74 (51%), Positives = 52/74 (70%)
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+P V WSDIGG + K L++ V W +H ++ RLG+K P+GILM+GPPG KTM+AK
Sbjct: 591 IPKVLWSDIGGLEVAKDVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKC 650
Query: 292 LATESKLNFISVKI 305
+A E+K NFI + I
Sbjct: 651 VAFEAKANFIPINI 664
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/220 (24%), Positives = 93/220 (42%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K GIL+YG GTGKT L +A K + + I ++++ GE+E L F
Sbjct: 627 GVKTPKGILMYGPPGTGKTMLAKCVAFEAKANFIPINISELIQGEIGESEKTLSEIFRIA 686
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQE-RRLLSCLVTQVDRL---HELQACVVLLAVTTSL 124
+ S+ ++L+S L+ ++D ++ V++LA T
Sbjct: 687 INSSPSIIFIDEIQSIFGLKESSNNSSKKLISQLLIELDNTIGNNDGGNRVMILAATNMP 746
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSL-STDQIQQVAFITHGFVG 183
+D S GR D+ + + P D+R +I L+ + ST + Q+A T F G
Sbjct: 747 QAIDPSFLRSGRFDKTVYIGPPEVDERKSIFETLIKNSSIKVDSTVDLNQLAKYTINFTG 806
Query: 184 GDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPS 223
D ++ + ++ D +M+ +KPS
Sbjct: 807 SDINALLKKSGLYA-IQRDINVTSITMDDIMKVFWEMKPS 845
Score = 64 (27.6 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADM 49
G+ K +L+YG GK++LI+ ++ M + I ++D+
Sbjct: 331 GISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDL 371
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 244 (91.0 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/106 (41%), Positives = 70/106 (66%)
Query: 199 VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPL 258
+ +E ++S D AL ++PS+ R+ +P+ W+DIG ++ +L ++ P+
Sbjct: 430 IGSEAEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPI 489
Query: 259 KHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
KHPE +A +GI P G+L++GPPGC KT++AKA+A ES+ NFISVK
Sbjct: 490 KHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVK 535
Score = 178 (67.7 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 69/256 (26%), Positives = 114/256 (44%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L SN ++ G+L++G G GKT + ++ A+ + V + I + S GE+E L+
Sbjct: 192 LASN-VQPPRGVLLHGPPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGESEKALREH 250
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRS--DQERRLLSCLVTQVDRLHELQAC----VVLL 118
F R S + E+R+++ L+T +D L L+ V++L
Sbjct: 251 FEEAKRLAPCLIFIDEIDAITPKRENSQREMEKRIVAQLLTCMDDL-ALEKTDGKPVIVL 309
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFI 177
A T D++D +LR GR D+EI + VPS R IL L K+ L D + +A
Sbjct: 310 AATNRPDSLDAALRRGGRFDKEINMTVPSEPVREQILRALTRKM--RLVDDLDFKTLAKR 367
Query: 178 THGFVGGDXXXXXXXXXXXXXVE-----TEGTGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
T GFVG D +G+ + +G D + PS ++++ +
Sbjct: 368 TPGFVGADLNDLVSTAGSTAIKRYLDLLKSNSGEEMDIEGQ----DDLSPS-VKELRRLI 422
Query: 233 PNVKWSDIGGQDEVKL 248
+ K + IG + EV L
Sbjct: 423 THAKETPIGSEAEVVL 438
Score = 176 (67.0 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 53/238 (22%), Positives = 109/238 (45%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFX 66
S G+ G+L++G G GKT L ++A+ + + + ++ ++ +K+ GE+E ++ F
Sbjct: 497 SVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFV 556
Query: 67 XXXXXXXXXXXXXXXXXXCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
R+ S+ R+++ L+T++D L + + ++A T
Sbjct: 557 RARSSIPCVIFFDELDALVPRRDDTLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRP 616
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D ++ PGRL+ + + +PS +R IL L+ ++P + D ++++A GF G
Sbjct: 617 DIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPIEFNED-LRRLAEECEGFSGA 675
Query: 185 DXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGG 242
D ++ T + +D + A ++PS + +WS GG
Sbjct: 676 DLTSLLRRAGYNA-IKRRDT---IKFDDFVAAKSFIRPSVTDMKKYDKLRREWS--GG 727
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
+V +D+GG D+V +L V P+ P+ + ++PPRG+L+ GPPGC KTMIA A A
Sbjct: 161 HVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFA 220
Query: 294 TESKLNFISV 303
E + FIS+
Sbjct: 221 AELGVPFISI 230
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 243 (90.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 80/318 (25%), Positives = 141/318 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q+ + +L+ G +G+GKT + ++ S + +H + + E ++ AF
Sbjct: 156 QAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMAF 215
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRSDQERRLLSCL-VTQVDRLHELQACVVLLAVTTSL 124
R+R ++ R+++ L +DR Q+ +L + T+
Sbjct: 216 AQAQQYHPCVLLLKDIEVLGRDRDRLGEDARVIATLRQLLLDR-DPAQSSHPVLVIGTTC 274
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
DV E+++ S DQR A+L L +P + ++A T GFV G
Sbjct: 275 KPQDVPTDVQTAFLHEVKIEALSEDQRRAMLSMLTASLPLGKEVS-LAKLARRTAGFVLG 333
Query: 185 DXXXXXXXXXXXXXVETE------GTGQVLSYD----G--VMR-----ALDHVKPSAMRQ 227
D + G + + D G V+ ALD + + +
Sbjct: 334 DFCALLSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLEEDFNVALDQLHDAHSQA 393
Query: 228 V-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
V ++P+V W D+GG EVK ++ +++ PL+HPE + LG+ G+L++GPPG KT
Sbjct: 394 VGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS-LGLCRS-GLLLYGPPGTGKT 451
Query: 287 MIAKALATESKLNFISVK 304
++AKA+AT + F+SVK
Sbjct: 452 LLAKAVATTCTMTFLSVK 469
Score = 125 (49.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 39/162 (24%), Positives = 76/162 (46%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+ + +G+L+YG GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 430 LLSLGLCR-SGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNV 488
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R RS R++S L+ ++D LH + V ++
Sbjct: 489 FARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSRE-VFVIGA 547
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPV-PSRDQRAAILHCLLTK 161
T D +D +L PGR D+ + + V R+ + +L + K
Sbjct: 548 TNRPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRK 589
Score = 43 (20.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 199 VETEGTGQVLSYDGVMRALDHVKPSAMRQVLV 230
++TE + +L+ + ++A ++PS Q L+
Sbjct: 637 LDTESSALILTMEDFLQAAARLQPSVSEQELL 668
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 218 (81.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 46/105 (43%), Positives = 64/105 (60%)
Query: 203 GTGQVLSY--DGVMRALDHVKPSAMRQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
G G V+++ D A++ + + +PNVKW DIGG D VK ++ +++ PLK
Sbjct: 777 GNGGVINWVPDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLK 836
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
HPE F G+K GIL +GPPG KT++AKA+AT LNF SVK
Sbjct: 837 HPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVK 880
Score = 151 (58.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 49/187 (26%), Positives = 86/187 (45%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L +NG+KK +GIL YG GTGKT L ++A++ ++ ++ ++ + + GE+E ++
Sbjct: 840 LFNNGLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRV 899
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLH-ELQACVVLLA 119
F R N+ D R++S L+ ++D + E V ++
Sbjct: 900 FQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVG 959
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAA-ILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D +L PGR D+ + L + D++ IL L K + + Q A +
Sbjct: 960 ATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCS 1019
Query: 179 HGFVGGD 185
F G D
Sbjct: 1020 FTFTGAD 1026
Score = 55 (24.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 31/170 (18%), Positives = 64/170 (37%)
Query: 16 ILIYGVN-GTGKTSLIHSLASHMKVHTVVIQVADMFS-----KFYGEAEFRL-KAAFXXX 68
IL+ ++ G GKT+L+ + + ++ + + D+ + K G ++ K
Sbjct: 552 ILLTSMSRGIGKTTLVRNSCIELGLNLIELDCFDLLNPGQELKTIGLLTGKIDKLIANVQ 611
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDR-LHELQACVVLLAVTTSLDNV 127
C + +DQ + + L ++ + LH+ L + S ++
Sbjct: 612 STSSFHVIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHDYLKTYRNLVIVMSCNDY 671
Query: 128 D-VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAF 176
D ++ + IE VPS ++R I L+ + T I F
Sbjct: 672 DKLNDNLKSIIKFTIEFTVPSENERLEIFKFLINNEKNKTFTKDINSYPF 721
Score = 47 (21.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 199 VETEGTGQVL-SYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWP 257
V TE VL + ++A + + PS + L V+ + GG+++ K +Q E
Sbjct: 1074 VATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEGGKEKAK---QQQQEQQ 1130
Query: 258 LKHPE 262
+HPE
Sbjct: 1131 QEHPE 1135
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 218 (81.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 46/105 (43%), Positives = 64/105 (60%)
Query: 203 GTGQVLSY--DGVMRALDHVKPSAMRQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLK 259
G G V+++ D A++ + + +PNVKW DIGG D VK ++ +++ PLK
Sbjct: 777 GNGGVINWVPDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLK 836
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
HPE F G+K GIL +GPPG KT++AKA+AT LNF SVK
Sbjct: 837 HPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVK 880
Score = 151 (58.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 49/187 (26%), Positives = 86/187 (45%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L +NG+KK +GIL YG GTGKT L ++A++ ++ ++ ++ + + GE+E ++
Sbjct: 840 LFNNGLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRV 899
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLH-ELQACVVLLA 119
F R N+ D R++S L+ ++D + E V ++
Sbjct: 900 FQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVG 959
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAA-ILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D +L PGR D+ + L + D++ IL L K + + Q A +
Sbjct: 960 ATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCS 1019
Query: 179 HGFVGGD 185
F G D
Sbjct: 1020 FTFTGAD 1026
Score = 55 (24.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 31/170 (18%), Positives = 64/170 (37%)
Query: 16 ILIYGVN-GTGKTSLIHSLASHMKVHTVVIQVADMFS-----KFYGEAEFRL-KAAFXXX 68
IL+ ++ G GKT+L+ + + ++ + + D+ + K G ++ K
Sbjct: 552 ILLTSMSRGIGKTTLVRNSCIELGLNLIELDCFDLLNPGQELKTIGLLTGKIDKLIANVQ 611
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDR-LHELQACVVLLAVTTSLDNV 127
C + +DQ + + L ++ + LH+ L + S ++
Sbjct: 612 STSSFHVIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHDYLKTYRNLVIVMSCNDY 671
Query: 128 D-VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAF 176
D ++ + IE VPS ++R I L+ + T I F
Sbjct: 672 DKLNDNLKSIIKFTIEFTVPSENERLEIFKFLINNEKNKTFTKDINSYPF 721
Score = 47 (21.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 199 VETEGTGQVL-SYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWP 257
V TE VL + ++A + + PS + L V+ + GG+++ K +Q E
Sbjct: 1074 VATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEGGKEKAK---QQQQEQQ 1130
Query: 258 LKHPE 262
+HPE
Sbjct: 1131 QEHPE 1135
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 215 (80.7 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 43/102 (42%), Positives = 67/102 (65%)
Query: 204 TGQVLSYDGVMRALDHVKP-SAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPE 262
T ++ + + +ALD K +A +VPNVKW D+GG ++VK + +V+ PL H +
Sbjct: 623 TEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKD 682
Query: 263 AFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
F+ G++ G+L++GPPG KT++AKA+ATE LNF+SVK
Sbjct: 683 LFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 723
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 45/188 (23%), Positives = 85/188 (45%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S+G++K +G+L+YG GTGKT L ++A+ ++ + ++ ++ + + GE+E ++
Sbjct: 683 LFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDI 742
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
F R S R++S ++ ++D L + + ++
Sbjct: 743 FEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGA 802
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPS-RDQRAAILHCLLTKVPHSLSTD-QIQQVAF-I 177
+ D +D +L PGR D+ + + V + R +L L K LS D + VA
Sbjct: 803 SNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKF--KLSEDVSLYSVAKKC 860
Query: 178 THGFVGGD 185
F G D
Sbjct: 861 PSTFTGAD 868
Score = 52 (23.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTV 42
+L++G+ G GK +++ +A + +H V
Sbjct: 380 VLLHGIPGCGKRTVVKYVARRLGLHVV 406
Score = 43 (20.2 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 134 PGRLDQEIELPVPSRDQRAAILHCLLTK--VPHSLSTDQIQQVAFITHGFVG 183
P L ++P+P +++ IL +L+ P +L++ +VA + HG G
Sbjct: 338 PDLLVYRSKVPMPLQEETVNILASVLSPPLCPSALASKL--RVAVLLHGIPG 387
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 229 (85.7 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 70/223 (31%), Positives = 115/223 (51%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q +RL L + + + V L+A + S ++ L G + Q ++ + P+++
Sbjct: 362 QSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQE 421
Query: 150 QRAAIL-HCLLTKVPHSLS--TD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXV-ETEGT 204
QR IL + + K+ ++ TD +Q VA T GFV D ++ T
Sbjct: 422 QRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSIST 481
Query: 205 GQ--VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ VL+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 482 REKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYP 541
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ GIL++GPPG KT++A +A ES++NFISVK
Sbjct: 542 ELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVK 584
Score = 192 (72.6 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 52/178 (29%), Positives = 89/178 (50%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++ GIL+YG GTGKT L +A +++ + ++ ++ SK+ G +E ++ F
Sbjct: 549 IRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQ 608
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 609 AAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 667
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P + R IL+ L +P + D +Q VA +T F G D
Sbjct: 668 DPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVD-LQHVASVTDSFTGAD 724
Score = 37 (18.1 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 14 NG-ILIYGVNGTGKTSLIHSL 33
NG +L+ G G+GK++L ++
Sbjct: 270 NGALLLTGGKGSGKSTLAKAI 290
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 229 (85.7 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 70/223 (31%), Positives = 115/223 (51%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q +RL L + + + V L+A + S ++ L G + Q ++ + P+++
Sbjct: 684 QSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQE 743
Query: 150 QRAAIL-HCLLTKVPHSLS--TD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXV-ETEGT 204
QR IL + + K+ ++ TD +Q VA T GFV D ++ T
Sbjct: 744 QRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSIST 803
Query: 205 GQ--VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ VL+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 804 REKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYP 863
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ GIL++GPPG KT++A +A ES++NFISVK
Sbjct: 864 ELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVK 906
Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 52/178 (29%), Positives = 89/178 (50%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++ GIL+YG GTGKT L +A +++ + ++ ++ SK+ G +E ++ F
Sbjct: 871 IRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQ 930
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 931 AAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 989
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P + R IL+ L +P + D +Q VA +T F G D
Sbjct: 990 DPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVD-LQHVASVTDSFTGAD 1046
Score = 37 (18.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 14 NG-ILIYGVNGTGKTSLIHSL 33
NG +L+ G G+GK++L ++
Sbjct: 592 NGALLLTGGKGSGKSTLAKAI 612
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 200 (75.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
++P+V W D+GG VK + ++++ PL+ PE FA+ G+K GIL +GPPG KT++AK
Sbjct: 989 KIPSVTWDDVGGLGNVKDAVMETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1047
Query: 291 ALATESKLNFISVK 304
A+ATE LNF SVK
Sbjct: 1048 AIATEYSLNFFSVK 1061
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/165 (25%), Positives = 77/165 (46%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L + GMKK +GIL YG GTGKT L ++A+ ++ ++ ++ + + GE+E ++
Sbjct: 1021 LFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRV 1080
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLH---ELQACVVL 117
F R N+ D R++S L+ ++D + + V +
Sbjct: 1081 FQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGDDSGGGVFV 1140
Query: 118 LAVTTSLDNVDVSLRTPGRLDQEIELPVP-SRDQRAAILHCLLTK 161
+ T D +D +L PGR D+ + L V + +++ I+ L K
Sbjct: 1141 IGATNRPDLLDQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRK 1185
Score = 67 (28.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 116 VLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQV 174
VL+A TT D + +R G E+E+ P +R IL ++ + +L + V
Sbjct: 847 VLIATTTEPDKIPDGVR--GLFTHELEMTAPDEGEREGILRSIVDQRGINLDPGVDLGGV 904
Query: 175 AFITHGFVGGD 185
A T V GD
Sbjct: 905 ALKTAALVAGD 915
Score = 40 (19.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIE 142
+VL A+ SLD V VSL G L + +E
Sbjct: 131 LVLDALALSLDTVFVSL--DGELAKRLE 156
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 208 (78.3 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 61/217 (28%), Positives = 102/217 (47%)
Query: 92 DQERRLLSCLVTQVDRL-HELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQ 150
D +LL+ + QV ++ ++ + +L ++ L + + L P +
Sbjct: 548 DNASKLLNFFINQVTKIFNKDNKRIRVLFSGKQKTQINPLLFDKHFVSETWSLRAPDKHA 607
Query: 151 RAAILHCLLTKVP-HSLSTD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVL 208
RA +L +K L+ D Q ++ T GF D +E + V+
Sbjct: 608 RAKLLEYFFSKNQIMKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFYDLQLERD-CDNVV 666
Query: 209 SYDGVMRALDHVKPSAMRQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
+ + ++L PSA+R V L + N+KW DIG K L +++EWP K+ F
Sbjct: 667 TRELFSKSLSAFTPSALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNC 726
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
++ GIL++G PGC KT++A A+A + LNFISVK
Sbjct: 727 PLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVK 763
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 39/148 (26%), Positives = 72/148 (48%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+GIL+YG G GKT L ++A ++ + ++ ++ +KF G +E ++ F
Sbjct: 732 SGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKP 791
Query: 74 XXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
G + + R+++ L+TQ+D L V +LA T+ D +D +L
Sbjct: 792 CILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDG-VYILAATSRPDLIDSAL 850
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLL 159
PGRLD+ + +P+ +R IL ++
Sbjct: 851 LRPGRLDKSVICNIPTESERLDILQAIV 878
Score = 53 (23.7 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 16 ILIYGVNGTGKTSLIHSLASHM-KVHTVVIQVAD 48
I++ G G GKT L+ L + + K H + ++ AD
Sbjct: 457 IILDGKQGIGKTRLLKELINEVEKDHHIFVKYAD 490
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 225 (84.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 40/73 (54%), Positives = 57/73 (78%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E PNV++ DIGG ++ ++R+ VE PLKHPE F ++GI+PP+GIL++GPPG KT++AK
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 291 ALATESKLNFISV 303
A+ATE+ FI V
Sbjct: 223 AVATETNATFIRV 235
Score = 157 (60.3 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ GIL+YG GTGKT L ++A+ + + +++ KF GE +K F
Sbjct: 200 GIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLA 259
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R + D+E +R L L+ ++D + + V ++ T
Sbjct: 260 KEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGF-DARGDVKIIGATNR 318
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
D +D ++ PGR D+ IE+P P R IL K+ +L+ D ++++A +T G V
Sbjct: 319 PDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKM--NLAEDVNLEEIAKMTEGCV 376
Query: 183 GGD 185
G +
Sbjct: 377 GAE 379
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 206 (77.6 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGG-QDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMF 278
+ PS + E P+V +SD+GG +D+++ KLR+ VE PL PE FA LGI PP+GIL++
Sbjct: 191 IDPSVTMMTVEEKPDVTYSDVGGCKDQIE-KLREVVELPLLSPERFATLGIDPPKGILLY 249
Query: 279 GPPGCSKTMIAKALATESKLNFISV 303
GPPG KT+ A+A+A + FI V
Sbjct: 250 GPPGTGKTLCARAVANRTDATFIRV 274
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 39/173 (22%), Positives = 73/173 (42%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ GIL+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 239 GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 298
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+TQ+D V+ A T
Sbjct: 299 RTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFA-TNR 357
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQIQQV 174
+ +D +L PGR+D+++E +P + RA I +H V + + I ++
Sbjct: 358 PNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRL 410
Score = 41 (19.5 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 105 VDRLHELQACVVLLAVTTSLDNVDVSLRTP-GRLDQEIELPVPSR 148
V L ++ VV L S +++ +R R IELP+P R
Sbjct: 146 VINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPR 190
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 193 (73.0 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 208 LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARL 267
++ D + ++++K + + EVPN+ +IG ++K L P+K+ + L
Sbjct: 646 INNDIIFEGVNNIKKKMTNENICEVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHL 705
Query: 268 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
GI GIL++GPPGC KTM+AKA++ E K NFI++K
Sbjct: 706 GINKSMGILLYGPPGCGKTMLAKAISNEMKANFIAIK 742
Score = 191 (72.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 49/180 (27%), Positives = 91/180 (50%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ K GIL+YG G GKT L ++++ MK + + I+ ++ +K+ GE+E +++ F
Sbjct: 706 GINKSMGILLYGPPGCGKTMLAKAISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYA 765
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRS-DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
C R N+S R+++ L++++D L + + V ++A T D
Sbjct: 766 SVYKPCLIFFDEIDSICINRSNNKSVSASDRVVNQLLSEMDGLSQREG-VYIIATTNRPD 824
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+D +L GR DQ I + +P R IL L +P + + ++++ +T G+ G D
Sbjct: 825 IIDKALLRSGRFDQLIYISLPKYQGRVDILKKLSKNMPIDKNV-RFEEISKLTRGYSGAD 883
Score = 64 (27.6 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 109 HELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLST 168
H V+LL++ D++ S ++ + I +P+P+ D R IL + LS
Sbjct: 378 HNSNIIVLLLSINKPNDSILYS-----KIQKFITIPIPTYDDRIEILE--QASCEYFLSF 430
Query: 169 DQIQQVAFITHGFVGG 184
D I A IT+GF G
Sbjct: 431 D-IPYTASITYGFNRG 445
Score = 54 (24.1 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 16 ILIYGVNGTGKTSLIHSLA 34
I I+G +GTGKT+L +++A
Sbjct: 287 INIFGTSGTGKTTLSYAIA 305
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 218 (81.8 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 40/101 (39%), Positives = 66/101 (65%)
Query: 204 TGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEA 263
+G +++ V +++ ++ + VP V W DIGG +E K LR +++ PL+ PE
Sbjct: 622 SGPIITEQDVDVSINRIRKEKSNTIFT-VPKVNWDDIGGLEEAKTVLRDTLQLPLQFPEL 680
Query: 264 FARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
F++ G+KP G+L++GPPG KT++AKA+ATE L F+S+K
Sbjct: 681 FSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIK 720
Score = 163 (62.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 52/188 (27%), Positives = 89/188 (47%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+K +G+L+YG GTGKT L ++A+ + + V I+ ++ + + GE+E ++
Sbjct: 680 LFSQGLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNV 739
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLH-ELQACVVLLA 119
F R N SD R++S L+ ++D + + V ++
Sbjct: 740 FEKARNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIG 799
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPV-PSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D SL PGR D+ + L + S + +A++L L TK T + ++A
Sbjct: 800 ATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRAL-TKTFKLDETIDLNEIAKNC 858
Query: 179 H-GFVGGD 185
H F G D
Sbjct: 859 HPNFTGAD 866
Score = 38 (18.4 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 17 LIYGVNGTGKTSLIHSLAS 35
L++G TGKT + +AS
Sbjct: 426 LLHGNPFTGKTKAVEEVAS 444
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 206 (77.6 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 56/198 (28%), Positives = 91/198 (45%)
Query: 115 VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQV 174
+ +A SL+ + +L + GR D ++L P+ +R AIL + K S D + +
Sbjct: 713 LAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNL 772
Query: 175 AFITHGFVGGDXXXXXXXXXXXXX-----VETEGTGQVLSYDGVMRALDHVKPSAMRQVL 229
A G+ D +E+ + L + RA+ P AMR +
Sbjct: 773 AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDIT 832
Query: 230 V---EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
E + W D+GG ++K +++ +E P K P+ FA+ ++ +L++GPPGC KT
Sbjct: 833 KSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKT 892
Query: 287 MIAKALATESKLNFISVK 304
I A A L FISVK
Sbjct: 893 HIVGAAAAACSLRFISVK 910
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 42/174 (24%), Positives = 82/174 (47%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+ +L+YG G GKT ++ + A+ + + ++ ++ +K+ G +E ++ F
Sbjct: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAP 938
Query: 74 XXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
G + + R+++ +T++D + L V + A T+ D +D +L
Sbjct: 939 CILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTG-VFVFAATSRPDLLDPAL 997
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
PGRLD+ + PS +R IL L K+ + D ++ +A +T GF G D
Sbjct: 998 LRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDID-LEPIALMTEGFSGAD 1050
Score = 52 (23.4 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMK 38
ILIYG G+GKT L + A + +
Sbjct: 596 ILIYGPPGSGKTILARAAAKYFE 618
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 203 (76.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ PS + E P+V +SD+GG E KLR+ VE PL PE F +LGI PP+GIL++G
Sbjct: 168 IDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYG 227
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 228 PPGTGKTLCARAVANRTDATFIRV 251
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 39/173 (22%), Positives = 73/173 (42%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ GIL+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 216 GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 275
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+TQ+D V+ A T
Sbjct: 276 RTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFA-TNR 334
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQIQQV 174
+ +D +L PGR+D+++E +P + RA I +H V + + I ++
Sbjct: 335 PNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRL 387
Score = 39 (18.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 105 VDRLHELQACVVLLAVTTSLDNVDVSLRTP-GRLDQEIELPVPSR 148
V + ++ VV L S +++ +R R EI+LP+P R
Sbjct: 123 VINIKQIAKFVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPR 167
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 227 (85.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 75/313 (23%), Positives = 143/313 (45%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+K+ IL+ G NG+GK + + +++ + +H + + + + +E ++K+ F
Sbjct: 556 LKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAE 615
Query: 70 XXXXXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
R+ ++ + R+ + L + +H VV++ +S +
Sbjct: 616 LHHPCLLLLRNLQLLGQSRDGAETDCRVAATLCQLIAAVH---TSVVVVGSVSSQHELPS 672
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXX 189
+ ++ + S DQR +L L + + + ++A T GFV GD
Sbjct: 673 DVMAA--FVHQVAIESLSEDQRRMVLSSLSEDLLLGKDVN-LGRIAKQTAGFVLGDLCAL 729
Query: 190 XXXXXXXXX---VET-------EGTGQVLSYDGVM-------RALDHVKPSAMRQV-LVE 231
VET E + L GV ALD ++ + + + +
Sbjct: 730 LTNAGKAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEAHSQAIGAPK 789
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+P V W D+GG +VK ++ +++ PL+HPE + LG++ G+L++GPPG KT++AKA
Sbjct: 790 IPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLS-LGLRRS-GLLLYGPPGTGKTLLAKA 847
Query: 292 LATESKLNFISVK 304
+ATE + F+SVK
Sbjct: 848 VATECTMTFLSVK 860
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S G+++ +G+L+YG GTGKT L ++A+ + + ++ ++ + + G++E ++
Sbjct: 821 LLSLGLRR-SGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQV 879
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAV 120
R S R++S L+ ++D LH V ++
Sbjct: 880 SSKARSAAPCIIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLHS-SGDVFVIGA 938
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPV-PSRDQRAAILHCLLTK 161
T D +D SL PGR D+ + + + R+ + +L +L K
Sbjct: 939 TNRPDLLDQSLLRPGRFDKLVYVGINEDRESQLQVLKAILRK 980
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 216 (81.1 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P+V ++DIGG D K ++R++VE PL H E + ++GI PPRG+LM+GPPGC KTM+AK
Sbjct: 153 EKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 212
Query: 291 ALATESKLNFISV 303
A+A + +FI V
Sbjct: 213 AVAHHTTASFIRV 225
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 190 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLA 249
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 250 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA-TNR 308
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ + + +K+ S D + VA
Sbjct: 309 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVA 360
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 215 (80.7 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 46/107 (42%), Positives = 70/107 (65%)
Query: 201 TEGTGQVLSYDG--VMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQ-DEVKLKLRQSVEW 256
T GT VL +MRAL + +L E P N+ +S +GG D+++ +LR+S+E
Sbjct: 99 TSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIR-ELRESIEL 157
Query: 257 PLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PL +PE F R+GIKPP+G+L++GPPG KT++A+A+A+ NF+ V
Sbjct: 158 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 51/183 (27%), Positives = 87/183 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG GTGKT L ++AS++ + + + + + K+ GE+ ++ F
Sbjct: 169 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA 228
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D +L +++A T
Sbjct: 229 REHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMA-TN 286
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE+P+P+ R IL + + D + + + GF
Sbjct: 287 RPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDY-EAIVKLGEGFN 345
Query: 183 GGD 185
G D
Sbjct: 346 GAD 348
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 215 (80.7 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 46/107 (42%), Positives = 70/107 (65%)
Query: 201 TEGTGQVLSYDG--VMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQ-DEVKLKLRQSVEW 256
T GT VL +MRAL + +L E P N+ +S +GG D+++ +LR+S+E
Sbjct: 99 TSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIR-ELRESIEL 157
Query: 257 PLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PL +PE F R+GIKPP+G+L++GPPG KT++A+A+A+ NF+ V
Sbjct: 158 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
Score = 159 (61.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG GTGKT L ++AS++ + + + + + K+ GE+ ++ F
Sbjct: 169 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA 228
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D L +++A T
Sbjct: 229 REHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMA-TN 286
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE+P+P+ R IL + D + + + GF
Sbjct: 287 RPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDY-EAIVKLAEGFN 345
Query: 183 GGD 185
G D
Sbjct: 346 GAD 348
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 215 (80.7 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P++ +SDIGG D K ++R++VE PL H + + ++GI PPRG+L+FGPPGC KTM+AK
Sbjct: 145 EKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAK 204
Query: 291 ALATESKLNFISV 303
A+A + +FI V
Sbjct: 205 AVAHHTTASFIRV 217
Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L++G G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 182 GIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLA 241
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D E V++A T
Sbjct: 242 KQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMA-TNR 300
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKV 162
D +D +L PGRLD++IELP+P R Q+ + + +K+
Sbjct: 301 ADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKM 339
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 215 (80.7 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P++ + DIGG D K ++R++VE PL H E + ++GI PPRG+LM+GPPGC KTM+AK
Sbjct: 154 EKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAK 213
Query: 291 ALATESKLNFISV 303
A+A + +FI V
Sbjct: 214 AVAANTAASFIRV 226
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G+L+YG G GKT L ++A++ + + ++ K+ GE ++ F
Sbjct: 188 QQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVF 247
Query: 66 XXXXXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAV 120
T R +D+E +R+L L+ Q+D + V++A
Sbjct: 248 RLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMA- 306
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
T D +D +L PGRLD++IE P+P R Q+ + + +++ +LS D
Sbjct: 307 TNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRM--NLSDD 353
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 213 (80.0 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 45/107 (42%), Positives = 69/107 (64%)
Query: 201 TEGTGQVLSYDG--VMRALDHVKPSAMRQVLVEVP-NVKWSDIGG-QDEVKLKLRQSVEW 256
T GT VL +MR L + +L E P NV +S +GG D+++ +LR+S+E
Sbjct: 100 TSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIR-ELRESIEL 158
Query: 257 PLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PL +PE F R+GIKPP+G+L++GPPG KT++A+A+A+ NF+ +
Sbjct: 159 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKI 205
Score = 165 (63.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG GTGKT L ++AS++ + + I + + K+ GE+ ++ F
Sbjct: 170 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYA 229
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D EL +++A T
Sbjct: 230 RDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMA-TN 287
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE+P+P+ R +L + D + V + GF
Sbjct: 288 RPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDY-EAVVKLAEGFN 346
Query: 183 GGD 185
G D
Sbjct: 347 GAD 349
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 211 (79.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+ E PNVK++D+GG D K +++++VE PL PE + ++GI+PP GIL++GPPG KTM+
Sbjct: 129 ITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTML 188
Query: 289 AKALATESKLNFISV 303
KA+A E+++ FI V
Sbjct: 189 VKAVANETQVTFIGV 203
Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ GILIYG GTGKT L+ ++A+ +V + + ++ K+ GE ++ F
Sbjct: 168 GIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLA 227
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 228 RENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMA-TNR 286
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
D +D +L PGRLD++IE P+P R Q+ I +++K+ ++S+D
Sbjct: 287 ADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKM--NVSSD 330
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 211 (79.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+ E PNVK++D+GG D K +++++VE PL PE + ++GI+PP GIL++GPPG KTM+
Sbjct: 129 ITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTML 188
Query: 289 AKALATESKLNFISV 303
KA+A E+++ FI V
Sbjct: 189 VKAVANETQVTFIGV 203
Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ GILIYG GTGKT L+ ++A+ +V + + ++ K+ GE ++ F
Sbjct: 168 GIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLA 227
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 228 RENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMA-TNR 286
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
D +D +L PGRLD++IE P+P R Q+ I +++K+ ++S+D
Sbjct: 287 ADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKM--NVSSD 330
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 220 (82.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 69/223 (30%), Positives = 111/223 (49%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q +RL L V + + V L+A + S ++ L G + Q ++ + P +D
Sbjct: 683 QSQRLAHALNDLVKEFISMGSLVALIATSQSQHSLHPLLVSAQGIHIFQCVQHIQPPDQD 742
Query: 150 QRAAILHCLL-TKVPHSLS--TD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXV-ETEGT 204
QR ILH ++ K+ + T +Q++A T GFV D + T
Sbjct: 743 QRCEILHAIIKNKLDCDMKRFTGLDLQRIAKETEGFVARDFTMLVDRAIHSHLSHQNVYT 802
Query: 205 GQ--VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ VL+ +AL P ++R V + P ++ W IGG +V+ L +++ P K+P
Sbjct: 803 REELVLTTLDFQKALRGFTPVSLRNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYP 862
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ G+L++GPPG KT++A +A ES +NFISVK
Sbjct: 863 ELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVK 905
Score = 188 (71.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 51/178 (28%), Positives = 88/178 (49%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++ G+L+YG GTGKT L +A ++ + ++ ++ SK+ G +E ++ F
Sbjct: 870 IRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDVFVRAQ 929
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 930 AAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 988
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P + R IL+ L +P + D +Q VA +T F G D
Sbjct: 989 DPALLRPGRLDKCVYCPPPDQASRLEILNVLSESLPLADDVD-LQHVASLTDSFTGAD 1045
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 20 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 79
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 80 PPGTGKTLCARAVANRTDACFIRV 103
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 68 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 127
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 128 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 186
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 187 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 217
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 42/91 (46%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V +SDIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 159 (61.0 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ + + +K+ S D VA
Sbjct: 314 ADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVA 365
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 219 (82.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 66/223 (29%), Positives = 114/223 (51%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q +RL L + + + V ++A + S ++ L G + Q ++ + P+++
Sbjct: 668 QSQRLAHALSDMMKEFISMGSLVAVIATSQSQHSLHPWLVSAQGIHIFQCVQHIQPPNQE 727
Query: 150 QRAAILHCLL-TKVPHSLS--TD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTG 205
QR ILH ++ K+ ++ T+ ++++A T GFV D T
Sbjct: 728 QRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSHLSHQRITT 787
Query: 206 Q---VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ VL+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 788 REELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYP 847
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ G+L++GPPG KT++A +A ES +NFISVK
Sbjct: 848 ELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVK 890
Score = 188 (71.2 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 51/173 (29%), Positives = 86/173 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L +A ++ + ++ ++ SK+ G +E ++ F
Sbjct: 860 GVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC 919
Query: 75 XXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
G + + R+++ L+TQ+D + LQ V +LA T+ D +D +L
Sbjct: 920 ILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLIDPALL 978
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
PGRLD+ + P P + R IL+ L +P + D +Q VA +T+ F G D
Sbjct: 979 RPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVD-LQHVASVTNSFTGAD 1030
Score = 37 (18.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 208 LSYDGVMRALDHVKPS 223
+S +M AL H +PS
Sbjct: 1213 ISQSHLMAALSHTRPS 1228
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 219 (82.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 66/223 (29%), Positives = 108/223 (48%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLD--QEIE-LPVPSRD 149
Q +RL L + + V L+A + ++ SL + + Q ++ L P+ +
Sbjct: 685 QSQRLAHALNDMIKEFVSTGSLVALIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNPE 744
Query: 150 QRAAILHCLL-TKVPHSLST--D-QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTG 205
QR ILH ++ K+ +S D +Q +A T FV D +
Sbjct: 745 QRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSS 804
Query: 206 Q---VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ L+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 805 REDLTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYP 864
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ GIL++GPPG KT++A +A ES +NFIS+K
Sbjct: 865 ELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIK 907
Score = 179 (68.1 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 53/179 (29%), Positives = 88/179 (49%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++ GIL+YG GTGKT L +A ++ + I+ ++ SK+ G +E ++ F
Sbjct: 872 IRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQ 931
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 932 AAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 990
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P + R IL L + +L+ D +Q VA +T F G D
Sbjct: 991 DPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSL--ALADDVDLQHVASVTDSFTGAD 1047
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 219 (82.2 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 66/223 (29%), Positives = 114/223 (51%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q +RL L + + + V ++A + S ++ L G + Q ++ + P+++
Sbjct: 817 QSQRLAHALSDMMKEFISMGSLVAVIATSQSQHSLHPWLVSAQGIHIFQCVQHIQPPNQE 876
Query: 150 QRAAILHCLL-TKVPHSLS--TD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTG 205
QR ILH ++ K+ ++ T+ ++++A T GFV D T
Sbjct: 877 QRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSHLSHQRITT 936
Query: 206 Q---VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ VL+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 937 REELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYP 996
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ G+L++GPPG KT++A +A ES +NFISVK
Sbjct: 997 ELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVK 1039
Score = 188 (71.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 51/173 (29%), Positives = 86/173 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L +A ++ + ++ ++ SK+ G +E ++ F
Sbjct: 1009 GVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC 1068
Query: 75 XXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
G + + R+++ L+TQ+D + LQ V +LA T+ D +D +L
Sbjct: 1069 ILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLIDPALL 1127
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
PGRLD+ + P P + R IL+ L +P + D +Q VA +T+ F G D
Sbjct: 1128 RPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVD-LQHVASVTNSFTGAD 1179
Score = 37 (18.1 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 208 LSYDGVMRALDHVKPS 223
+S +M AL H +PS
Sbjct: 1362 ISQSHLMAALSHTRPS 1377
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 177 (67.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 50/164 (30%), Positives = 84/164 (51%)
Query: 142 ELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXXXXXXXXXVET 201
+LP+ SR+ ++ + + +L+ +Q VA + GF+ GD
Sbjct: 522 QLPLFSRENQSQFMPRISPSWRETLNV--LQDVAAKSQGFLLGDLQLLYDNAVRMKIRNR 579
Query: 202 EGTGQVLSYDGVMRALDHVKPSAMRQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKH 260
G L + L ++ S + +VP V WSDIGG ++K +++ S+ PLKH
Sbjct: 580 LGR-TTLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKH 638
Query: 261 PEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+ ++ GIL++GPPG KT++AKA+ATE L+F+SV+
Sbjct: 639 VHLMGK-NLRRS-GILLYGPPGTGKTLVAKAVATECNLSFLSVQ 680
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 38/178 (21%), Positives = 80/178 (44%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L +++ +GIL+YG GTGKT + ++A+ + + +Q ++ + + G++E ++
Sbjct: 641 LMGKNLRR-SGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREV 699
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQER----RLLSCLVTQVDRLHELQAC--VVLL 118
F R + R++S L+ ++D + + + +L
Sbjct: 700 FSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFIL 759
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIEL-PVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
A T D +D +L PGR D+ + P + + +AA+L + D ++Q+A
Sbjct: 760 AATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVD-MEQIA 816
Score = 94 (38.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 34/141 (24%), Positives = 63/141 (44%)
Query: 17 LIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXXXX 76
L+ G G+GK+ L+ ++A + +H A++ S+ E +LKA F
Sbjct: 365 LLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMI 424
Query: 77 XXXXXXXXCTGRNRSDQERRLLSCLVTQVDRL--HELQACVVLLAVTTSLDNVDVSLRTP 134
N +++ RLLS QV L + + +V++A+T+ D +
Sbjct: 425 CFHNFEIFGID-NEGNEDLRLLSAFHVQVQELFNRDRKHPIVVVALTS--DR-HLKPMIQ 480
Query: 135 GRLDQEIELPVPSRDQRAAIL 155
G + I + +PS+++R IL
Sbjct: 481 GLFLEIINIDMPSKEERFEIL 501
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 139 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 198
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 199 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 229
Score = 160 (61.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 194 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 253
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 254 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 312
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 313 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 364
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 314 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 314 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 314 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 314 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 314 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 217 LDHVKPSAMRQVLV----EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPP 272
+D + P A +++ + P+V ++DIGG D K ++R++VE PL H E + ++GI PP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 273 RGILMFGPPGCSKTMIAKALATESKLNFISV 303
RG+LM+GPPGC KTM+AKA+A + FI V
Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A H + + ++ K+ GE ++ F
Sbjct: 195 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA-TNR 313
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D VA
Sbjct: 314 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 207 (77.9 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 39/74 (52%), Positives = 53/74 (71%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
++PNV W D+GG VK L ++++ PL+ PE FA+ G+K GIL +GPPG KT++AK
Sbjct: 1018 KIPNVSWEDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1076
Query: 291 ALATESKLNFISVK 304
A+ATE LNF SVK
Sbjct: 1077 AIATEFSLNFFSVK 1090
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 50/191 (26%), Positives = 90/191 (47%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L + GMKK +GIL YG GTGKT L ++A+ ++ ++ ++ + + GE+E ++
Sbjct: 1050 LFAKGMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRV 1109
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGR-NRSDQER---RLLSCLVTQVDRLH---ELQACVVL 117
F R N+ D R++S L+ ++D ++ E V +
Sbjct: 1110 FQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFV 1169
Query: 118 LAVTTSLDNVDVSLRTPGRLDQEIELPVP-SRDQRAAILHCLLTK--VPHSLSTDQIQQV 174
+ T D +D +L PGR D+ + L V + +++A IL L K + LS ++ +
Sbjct: 1170 IGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPDLSLARVSER 1229
Query: 175 AFITHGFVGGD 185
+T + G D
Sbjct: 1230 LPLT--YTGAD 1238
Score = 37 (18.1 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSK 52
GMK +L GK SL + + +HT I D+ ++
Sbjct: 778 GMKPVVILLRSQQRHIGKASLATRACAEIGLHTFPIDAYDILTE 821
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 215 (80.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLD--QEIE-LPVPSRD 149
Q +RL L + + + V L+A + ++ SL + + Q I+ + P ++
Sbjct: 684 QSQRLAHALNNMIKEFVSMGSLVALIATSQLQHSLHPSLVSAQGVHTFQCIQHIQPPDQE 743
Query: 150 QRAAILHCLL-TKVPHSLSTD---QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGT- 204
QR ILH ++ K+ +S ++ +A T FV D +
Sbjct: 744 QRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFTVLVDRAIHSSLSRQQNPT 803
Query: 205 --GQVLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
G L+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 804 REGLTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYP 863
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
E FA L I+ GIL++GPPG KT++A +A ES +NFIS++
Sbjct: 864 ELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQ 906
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 54/178 (30%), Positives = 87/178 (48%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++ GIL+YG GTGKT L +A ++ + IQ ++ SK+ G +E ++ F
Sbjct: 871 IRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQ 930
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 931 AAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 989
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P + R IL L +P + D +Q VA +T F G D
Sbjct: 990 DPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVD-LQHVASVTESFTGAD 1046
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 202 (76.2 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 64/215 (29%), Positives = 107/215 (49%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q +RL L L + + V L+A + S ++ L G L Q ++ + P ++
Sbjct: 687 QSQRLAHALNDMTKELISMGSLVALIATSQSQHSLHPLLVSAQGIHLFQCVQHIQPPDQE 746
Query: 150 QRAAILH-CLLTKVPHSLS--TD-QIQQVAFITHGFVGGDXXXXXXXXXXXXXV-ETEGT 204
QR ILH + K+ ++ TD ++++A T GFV D ++ T
Sbjct: 747 QRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFVARDFIVLVDRAIHSRLSNQSVST 806
Query: 205 GQ--VLSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
+ VL+ +AL P+++R V + P ++ W IGG EV+ L +++ P K+P
Sbjct: 807 REELVLTTLDFQKALQGFVPASLRNVNLHKPRDLGWDHIGGLREVRQILMDTIQLPAKYP 866
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
E FA L I+ G+L++GPPG KT++A +A ES
Sbjct: 867 ELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARES 901
Score = 181 (68.8 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 52/179 (29%), Positives = 88/179 (49%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVA-DMFSKFYGEAEFRLKAAFXXX 68
+++ G+L+YG GTGKT L +A + +V++ ++ SK+ G +E ++ F
Sbjct: 874 IRQRTGVLLYGPPGTGKTLLAGVVARESGMILLVLRYGPELLSKYIGASEQAVRDIFIRA 933
Query: 69 XXXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
G + + R+++ L+TQ+D + LQ V +LA T+ D
Sbjct: 934 QAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDL 992
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+D +L PGRLD+ + P P + R IL+ L +P + D +Q VA +T F G D
Sbjct: 993 IDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSASLPLAEDVD-LQHVASLTDSFTGAD 1050
Score = 40 (19.1 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 14 NG-ILIYGVNGTGKTSLIHSLASH----MKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
NG +L+ G G+GK++L ++ + H ++ + K + + AAF
Sbjct: 595 NGALLLTGGKGSGKSTLAKAICKEAFDVLDAHVEIVDCKALRGKRLENLQKTIVAAF 651
Score = 40 (19.1 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 204 TGQVLSYDGVMRALDHVKPS 223
T +S +M AL H +PS
Sbjct: 1228 TSLAISQSHLMTALSHTRPS 1247
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 206 (77.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 148 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 207
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 208 PPGTGKTLCARAVANRTDACFIRV 231
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 196 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 255
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 256 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 314
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 315 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 345
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 156 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 215
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 216 PPGTGKTLCARAVANRTDACFIRV 239
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 204 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 263
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 264 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 322
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 323 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 353
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 37/152 (24%), Positives = 66/152 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL 155
D +D +L PGRLD++IE +P + R IL
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHIL 355
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIPV 240
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIPV 240
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 206 (77.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 158 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 217
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 218 PPGTGKTLCARAVANRTDACFIRV 241
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 206 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 265
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 266 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 324
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 325 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 355
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 206 (77.6 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + E P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 199 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 258
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 259 PPGTGKTLCARAVANRTDACFIRV 282
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 247 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 306
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 307 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 365
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD++IE +P + R I
Sbjct: 366 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 396
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 202 (76.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGG-QDEVKLKLRQSVEWPLKHPEAFARLGIK 270
+MR L V P L + + ++ IGG D+++ +LR+ +E PLK+PE F R+GIK
Sbjct: 111 IMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNDQIR-ELREVIELPLKNPELFQRVGIK 169
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PP+G+L++GPPG KT++A+A+A+ + NF+ V
Sbjct: 170 PPKGVLLYGPPGTGKTLLARAVASSMETNFLKV 202
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 53/186 (28%), Positives = 86/186 (46%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+K G+L+YG GTGKT L ++AS M+ + + + + + K+ GE+ ++ F
Sbjct: 164 QRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMF 223
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 224 GYAKEHEPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMA 282
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L GRLD++IE+P+P+ R IL + V D + V ++
Sbjct: 283 -TNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDID-FESVVKMSD 340
Query: 180 GFVGGD 185
G G D
Sbjct: 341 GLNGAD 346
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 203 (76.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ P+ + + P+V +SD+GG E KLR+ VE PL HPE F LGI+PP+G+L+FG
Sbjct: 157 IDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFG 216
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRV 240
Score = 124 (48.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 39/173 (22%), Positives = 75/173 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L++G GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 205 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 265 RSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 323
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQIQQV 174
D +D +L PGRLD+++E +P +D R+ I +H V + D + ++
Sbjct: 324 PDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARL 376
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/179 (31%), Positives = 85/179 (47%)
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQ---IQQVAFITHGFVGG 184
D L P + D +++ + + +Q + C TK+ ++ TDQ I V I VG
Sbjct: 56 DTGLCLPNQWDLQLDKQMLNEEQPLQVARC--TKIINA-DTDQTKYIINVKQIAKFVVGL 112
Query: 185 DXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQD 244
V + T Y + + PS + E P++ ++DIGG
Sbjct: 113 GDKVAPSDIEEGMRVGVDRT----KYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCK 168
Query: 245 EVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
E KLR+ VE PL PE F LGI PP+G+L++GPPG KT+ A+A+A + FI V
Sbjct: 169 EQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICV 227
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 38/151 (25%), Positives = 63/151 (41%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 192 GIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMA 251
Query: 69 XXXXXXXXXXXXXXXXCTGRN----RSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R D E +R + +V Q+D VL+A T
Sbjct: 252 KSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMA-TNR 310
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGR+D+ IE +P + R I
Sbjct: 311 PDTLDSALVRPGRIDRRIEFSLPDLEGRTHI 341
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/179 (31%), Positives = 85/179 (47%)
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQ---IQQVAFITHGFVGG 184
D L P + D +++ + + +Q + C TK+ ++ TDQ I V I VG
Sbjct: 56 DTGLCLPNQWDLQLDKQMLNEEQPLQVARC--TKIINA-DTDQTKYIINVKQIAKFVVGL 112
Query: 185 DXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQD 244
V + T Y + + PS + E P++ ++DIGG
Sbjct: 113 GDKVAPSDIEEGMRVGVDRT----KYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCK 168
Query: 245 EVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
E KLR+ VE PL PE F LGI PP+G+L++GPPG KT+ A+A+A + FI V
Sbjct: 169 EQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICV 227
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 38/151 (25%), Positives = 63/151 (41%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 192 GIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMA 251
Query: 69 XXXXXXXXXXXXXXXXCTGRN----RSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
R D E +R + +V Q+D VL+A T
Sbjct: 252 KSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMA-TNR 310
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGR+D+ IE +P + R I
Sbjct: 311 PDTLDSALVRPGRIDRRIEFSLPDLEGRTHI 341
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 38/85 (44%), Positives = 59/85 (69%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGG-QDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMF 278
+ P+ + E P+V +SD+GG +D+++ KLR+ VE PL HPE + LGI+PP+G+L++
Sbjct: 159 IDPTVTMMQVEEKPDVTYSDVGGCKDQIE-KLREVVETPLLHPERYVNLGIEPPKGVLLY 217
Query: 279 GPPGCSKTMIAKALATESKLNFISV 303
GPPG KT+ A+A+A + FI V
Sbjct: 218 GPPGTGKTLCARAVANRTDACFIRV 242
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 207 GIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 266
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G+ ++ +R + L+ Q+D VL+A T
Sbjct: 267 RTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 325
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL--HCLLTKVPHSLSTDQIQQV 174
D +D +L PGRLD+++E +P RA IL H V + D + ++
Sbjct: 326 PDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARL 378
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 38/85 (44%), Positives = 59/85 (69%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGG-QDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMF 278
+ P+ + E P+V +SD+GG +D+++ KLR+ VE PL HPE + LGI+PP+G+L++
Sbjct: 159 IDPTVTMMQVEEKPDVTYSDVGGCKDQIE-KLREVVETPLLHPERYVNLGIEPPKGVLLY 217
Query: 279 GPPGCSKTMIAKALATESKLNFISV 303
GPPG KT+ A+A+A + FI V
Sbjct: 218 GPPGTGKTLCARAVANRTDACFIRV 242
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 207 GIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 266
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G+ ++ +R + L+ Q+D VL+A T
Sbjct: 267 RTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 325
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL--HCLLTKVPHSLSTDQIQQV 174
D +D +L PGRLD+++E +P RA IL H V + D + ++
Sbjct: 326 PDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARL 378
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 37/92 (40%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P L + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 130 (50.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 36/169 (21%), Positives = 78/169 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQI 171
+ +D +L PGR+D++IE P+P + I +H + ++ D++
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 383
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 201 (75.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ PS + E P+V ++D+GG E K+R+ VE P+ HPE F +LGI PP+G+L +G
Sbjct: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRV 233
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 35/151 (23%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L YG GTGKT L ++A+ + + +++ K+ GE ++ F
Sbjct: 198 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 257
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + +V Q+D + + + +L T
Sbjct: 258 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF-DARGNIKVLMATNR 316
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD+++E +P + R I
Sbjct: 317 PDTLDPALLRPGRLDRKVEFGLPDLESRTQI 347
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 200 (75.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P+V ++DIGG D K ++R++VE PL H E + ++GI PPRG+L++GPPG KTM+AK
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207
Query: 291 ALATESKLNFISV 303
A+A + FI V
Sbjct: 208 AVANHTTAAFIRV 220
Score = 168 (64.2 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT L ++A+H + + ++ K+ GE ++ F
Sbjct: 185 GIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 244
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 245 KENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMA-TNR 303
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
D +D +L PGRLD++IE P+P R Q+ + +K+ S D
Sbjct: 304 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVD 349
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 198 (74.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 108 LHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLS 167
L L ++ LA + D++ R R +E+ + +PS QR ++ L ++S
Sbjct: 343 LDALPRGIICLATSGVPDSLHEHARR--RFVREVTINMPSEGQRRQLVEHLCEVHELNIS 400
Query: 168 TDQIQQVAFITHGFVGGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQ 227
++ +A T G+V D + + + + +++L +PSA R
Sbjct: 401 QTLLEHIARNTQGYVIADLTLLLRRVQQQLLTKDDFDIEHI----FLKSLSQTQPSASRS 456
Query: 228 VLVEVPNVK--WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
V V + + IGG + +K L+ SV ++ AFAR G+ P+G+L++GPPGC+K
Sbjct: 457 TDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAK 516
Query: 286 TMIAKALATESKLNFIS 302
T +AK LA E+ + FI+
Sbjct: 517 TTVAKCLAKEADMTFIA 533
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/185 (23%), Positives = 80/185 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G KT++ LA + + A+++S + G AE + F
Sbjct: 499 GLSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTA 558
Query: 69 XXXX------XXXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRL--HELQACVVLLAV 120
+G + R+LS L+T+++ + Q ++++A
Sbjct: 559 RKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAA 618
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T D +D +L PGR D+ I +P P R A+L ++P + +Q++A T
Sbjct: 619 TNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFHENVF-LQEIAARTDR 677
Query: 181 FVGGD 185
+ G D
Sbjct: 678 YSGAD 682
Score = 42 (19.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 17 LIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
L+ G GK+ L+ + I + + + GE E L+ F
Sbjct: 224 LVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIF 272
>UNIPROTKB|G3V4X1 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AL161662
HGNC:HGNC:9547 EMBL:AL355074 ProteinModelPortal:G3V4X1 SMR:G3V4X1
Ensembl:ENST00000553835 ArrayExpress:G3V4X1 Bgee:G3V4X1
Uniprot:G3V4X1
Length = 84
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 217 LDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGIL 276
+D P + + P ++DIGG D ++++SVE PL HPE + +GIKPP+G++
Sbjct: 1 MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 60
Query: 277 MFGPPGCSKTMIAKALATESKLNF 300
++GPPG KT++AKA+A ++ F
Sbjct: 61 LYGPPGTGKTLLAKAVANQTSATF 84
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 203 (76.5 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 69/313 (22%), Positives = 132/313 (42%)
Query: 2 DYALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGE--AEF 59
++A N + I I G G GK++L+HSL + ++++ Q+ S+ A+F
Sbjct: 361 EFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKF 420
Query: 60 RL--KAAFXXXXXXXXXXXXXXXXXXXCTGRNRSDQ----ERRLLSCLVTQVDRLHELQA 113
+ F + N + + E R ++ L Q+ L +
Sbjct: 421 QSFWNNVFIQAERYEPSIIYLDDVHCLISSSNENGELGFVEEREIAFLQHQIINLKRKRK 480
Query: 114 CVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQ 173
++ + +L P +I LP + +R IL + + ++ D I+
Sbjct: 481 -IIFIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEF 539
Query: 174 VAFITHGFVGGDXXXXXXXXXXXXXVET--EGTGQVLSYDGVMRALDHVKPSAMRQVLVE 231
++ T G++ D VE G +++ + + L P +R+
Sbjct: 540 ISVKTEGYLMTDLVLFVKRLLSEAFVEKIQNGPKHLMNKGLIEKTLKDFVPLQLRKAKFV 599
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+++W DI G E K +R +E P+K+ + + ++ P GIL+FG PGC KT +A A
Sbjct: 600 KSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASA 659
Query: 292 LATESKLNFISVK 304
+++ + FIS+K
Sbjct: 660 ISSTFPVQFISIK 672
Score = 160 (61.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
GIL++G G GKT L +++S V + I+ ++ K+ G++E ++ F
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 75 XXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
G++ + R+++ ++TQ+D L V ++A TT D +D +L
Sbjct: 702 VLFFDEFDSVAPRRGQDSTGVTDRVVNQILTQMDGAESLDG-VYIVAATTRPDMIDPALL 760
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
PGRLD+ I +P+ ++R +L L + H + +++++ +T G+ D
Sbjct: 761 RPGRLDKLIFCDLPNEEERLEVLQKLANRF-HIENAAMLKKLSTLTDGYTYAD 812
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 199 (75.1 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 88 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 145
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 146 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 177
Score = 129 (50.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 142 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 202 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 261
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 262 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 291
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 68 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 127
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 128 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 159
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 196 (74.1 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 69/226 (30%), Positives = 105/226 (46%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL-RTPG-RLDQEIE-LPVPSRD 149
Q RL L + + L + + L+A + S + SL G + Q + + P +
Sbjct: 692 QSSRLAYVLKDLIKEVISLGSLIALIATSQSEHALHPSLVSAQGTHIFQCFKCIQSPDQK 751
Query: 150 QRAAILHCLLTKVPHSLSTD-------QIQQVAFITHGFVGGDXXXXXXXXXXXXXVETE 202
QR +L C + K + L+ D +Q VA T GFV D
Sbjct: 752 QRCEML-CSVIK--NKLNCDVKKFSDLDLQYVAKETEGFVARDFTMLVDRAIHACISNQN 808
Query: 203 GT--GQV-LSYDGVMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPL 258
G++ LS +AL P A+R V + P ++ W IGG +V+ L ++ P
Sbjct: 809 AFQHGELNLSTVDFQKALKDFTPLALRNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPA 868
Query: 259 KHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
K+PE FA L I+ G+L++G PG KT++A +A ES +NFISVK
Sbjct: 869 KYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVARESGMNFISVK 914
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++ +G+L+YG GTGKT L +A ++ + ++ ++ SK+ G +E ++ F
Sbjct: 879 IRQRSGVLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQ 938
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 939 AAKPCIVFFDEFDSIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 997
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P + R IL L + SL+ D ++ +A T F G D
Sbjct: 998 DPALLRPGRLDKCLYCPPPDQSSRCEILKALSHSL--SLANDVDLEYLAAKTEHFTGAD 1054
Score = 51 (23.0 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 12 KCNGILIYGVNGTGKTSLIHSLASH----MKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
+ G+L+ G G+GK++L ++ + H VI + K G ++ AF
Sbjct: 599 RSGGVLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAF 656
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 199 (75.1 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 37/92 (40%), Positives = 62/92 (67%)
Query: 213 VMRALDHVKPSAMRQVLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L + + +E P ++ ++ +GG +E +LR+ +E PLK+PE F R+GIKP
Sbjct: 106 IMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKP 165
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G+L++GPPG KT++A+A+A +NF+ V
Sbjct: 166 PKGVLLYGPPGTGKTLLARAVAASLGVNFLKV 197
Score = 161 (61.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/183 (29%), Positives = 87/183 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG GTGKT L ++A+ + V+ + + + + K+ GE+ ++ F
Sbjct: 162 GIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA 221
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D L +++A T
Sbjct: 222 KEHEPCVIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMA-TN 279
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE+P+P+ R IL L KV D + + +T G
Sbjct: 280 RPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDY-EALVKLTDGTN 338
Query: 183 GGD 185
G D
Sbjct: 339 GAD 341
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 199 (75.1 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 40/90 (44%), Positives = 56/90 (62%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P E + ++ IGG E +LR+ +E PLK+PE F R+GIKP
Sbjct: 146 IMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKP 205
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFI 301
P+G+L++GPPG KT++AKA+A NFI
Sbjct: 206 PKGVLLYGPPGTGKTLLAKAVAATIGANFI 235
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+L+YG GTGKT L ++A+ + + + + + K+ GE+ ++ F
Sbjct: 202 GIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYA 261
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D L +++A T
Sbjct: 262 KEHEPCIIFMDEVDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMA-TN 319
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L GRLD++IE+ +P+ R I +KV D + ++ GF
Sbjct: 320 RPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFD-FEAAVKMSDGFN 378
Query: 183 GGD 185
G D
Sbjct: 379 GAD 381
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 199 (75.1 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 159 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 216
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 217 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 248
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 36/169 (21%), Positives = 78/169 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 213 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 273 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 332
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQI 171
+ +D +L PGR+D++IE P+P + I +H + ++ D++
Sbjct: 333 ETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 381
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 160 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 217
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 218 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 249
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 36/169 (21%), Positives = 78/169 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 214 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 274 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 333
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQI 171
+ +D +L PGR+D++IE P+P + I +H + ++ D++
Sbjct: 334 ETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 382
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 218 DHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILM 277
D P L + P ++DIGG D ++++SVE PL HPE + +GIKPP+G+++
Sbjct: 164 DDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVIL 223
Query: 278 FGPPGCSKTMIAKALATESKLNFISV 303
+GPPG KT++AKA+A ++ F+ V
Sbjct: 224 YGPPGTGKTLLAKAVANQTSATFLRV 249
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 214 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 274 EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 333
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 334 ETLDPALIRPGRIDRKIEFPLPDEKTKRRI 363
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++GPPG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ +D +L PGR+D++IE P+P + I
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 190 (71.9 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 201 (75.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 52/178 (29%), Positives = 88/178 (49%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXX 69
+++C+G+L+YG GTGKT L ++A ++ + I+ ++ SK+ G +E ++ F
Sbjct: 827 LRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQ 886
Query: 70 XXXXXXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
G + + R+++ L+TQ+D + L V +LA ++ D +
Sbjct: 887 QAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTG-VYVLAASSRPDLI 945
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
D +L PGRLD+ + P P R R IL L VP + D + Q+A T F G D
Sbjct: 946 DPALLRPGRLDKSLYCPPPDRAARLEILRALTHSVPLAADVD-LDQIAGATELFTGAD 1002
Score = 175 (66.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 142 ELPVPSRDQRAAILHCLLTKVPHSL--STDQIQQVAFITHGFVGGDXXXXXXXXXXXXXV 199
++P P + QR IL L+ K + +T + VA T GF+ D +
Sbjct: 700 KIPTPDQAQRVEILKSLIVKKSFQVCQTTLDLDSVAKETEGFMARDLNLLLERAIHANTL 759
Query: 200 ETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSD-IGGQDEVKLKLRQSVEWPL 258
+ LS +AL P ++ ++ P+ + IGG E + L + P
Sbjct: 760 HNS---EDLSCKDFRQALQGFTPPSLWDAQLQAPSGAGMERIGGLHEARQLLMDIILLPA 816
Query: 259 KHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
K+P F+ L ++ G+L++G PG KT++A A+A ES +NFIS+K
Sbjct: 817 KYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFISIK 862
Score = 44 (20.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 16 ILIYGVNGTGKTSLIHSL 33
+LI G G+GK+SL +L
Sbjct: 559 LLITGAKGSGKSSLSRAL 576
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 198 (74.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 35/87 (40%), Positives = 57/87 (65%)
Query: 217 LDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGIL 276
LD V P + + P ++DIGG + +++++VE PL HPE + +GIKPP+G++
Sbjct: 172 LDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 231
Query: 277 MFGPPGCSKTMIAKALATESKLNFISV 303
++GPPG KT++AKA+A E+ F+ V
Sbjct: 232 LYGPPGTGKTLLAKAVANETSATFLRV 258
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 38/165 (23%), Positives = 75/165 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 223 GIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 282
Query: 69 XXXXXXXXXXXXXXXXCTGRNR--SDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R S ER + ++ +++L + + V ++ T +
Sbjct: 283 EEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 342
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
D++D +L PGR+D++I+LP P + I +K+ S D
Sbjct: 343 DSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVD 387
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 198 (74.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 35/87 (40%), Positives = 57/87 (65%)
Query: 217 LDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGIL 276
LD V P + + P ++DIGG + +++++VE PL HPE + +GIKPP+G++
Sbjct: 172 LDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 231
Query: 277 MFGPPGCSKTMIAKALATESKLNFISV 303
++GPPG KT++AKA+A E+ F+ V
Sbjct: 232 LYGPPGTGKTLLAKAVANETSATFLRV 258
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 38/165 (23%), Positives = 75/165 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 223 GIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 282
Query: 69 XXXXXXXXXXXXXXXXCTGRNR--SDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R S ER + ++ +++L + + V ++ T +
Sbjct: 283 EEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 342
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
D++D +L PGR+D++I+LP P + I +K+ S D
Sbjct: 343 DSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVD 387
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 40/92 (43%), Positives = 59/92 (64%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + + N+ +SD+GG E +LR+ VE PL +PE F R+GI P
Sbjct: 124 IMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITP 183
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L+FGPPG KT++A+A+A++ NF+ V
Sbjct: 184 PKGCLLFGPPGTGKTLLARAVASQLDCNFLKV 215
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G L++G GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 180 GITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYA 239
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D L V++A T
Sbjct: 240 RDHQPCIVFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMA-TN 297
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE+ +P+ R IL K+ D + V ++ GF
Sbjct: 298 RPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID-FEAVVKLSDGFS 356
Query: 183 GGD 185
D
Sbjct: 357 AAD 359
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 40/92 (43%), Positives = 59/92 (64%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + + N+ +SD+GG E +LR+ VE PL +PE F R+GI P
Sbjct: 124 IMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITP 183
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L+FGPPG KT++A+A+A++ NF+ V
Sbjct: 184 PKGCLLFGPPGTGKTLLARAVASQLDCNFLKV 215
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G L++G GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 180 GITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYA 239
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D L V++A T
Sbjct: 240 RDHQPCIVFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMA-TN 297
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE+ +P+ R IL K+ D + V ++ GF
Sbjct: 298 RPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID-FEAVVKLSDGFS 356
Query: 183 GGD 185
D
Sbjct: 357 AAD 359
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 197 (74.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 225 MRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCS 284
M QV E P++ + D+GG E KLR+ VE PL HPE F LGI PP+G+LM+GPPG
Sbjct: 158 MMQV-EEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTG 216
Query: 285 KTMIAKALATESKLNFISV 303
KT+ A+A+A + F+ V
Sbjct: 217 KTLCARAVANRTDAAFVRV 235
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 38/151 (25%), Positives = 65/151 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT ++A+ V + +++ K+ GE ++ F
Sbjct: 200 GIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMA 259
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+ Q+D VL+A T
Sbjct: 260 RSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA-TNR 318
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
D +D +L PGRLD+++E +P + RA I
Sbjct: 319 PDTLDPALLRPGRLDRKVEFGLPDLEGRAHI 349
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 123 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 182
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 183 ACAAQTKATFLKL 195
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 194 (73.4 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 34/73 (46%), Positives = 53/73 (72%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P+V ++D+GG D K ++R++VE PL H + + ++GI PPRG+L++GPPG KTM+ K
Sbjct: 159 EKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVK 218
Query: 291 ALATESKLNFISV 303
A+A + +FI V
Sbjct: 219 AVANSTTASFIRV 231
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/167 (26%), Positives = 77/167 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT L+ ++A+ + + ++ K+ GE ++ F
Sbjct: 196 GIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMA 255
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + V++A T
Sbjct: 256 RENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMA-TNR 314
Query: 124 LDNVDVSLRTPGRLDQEIELP-VPSRDQRAAILHCLLTKVPHSLSTD 169
D +D +L PGRLD++IE P + R +R I + +K+ S D
Sbjct: 315 ADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVD 361
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
V P ++ +VP+ + IGG D+ ++++ +E P+KHPE F LGI P+G+L++G
Sbjct: 123 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 182
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 183 PPGTGKTLLARAVAHHTDCTFIRV 206
>UNIPROTKB|J3QLH6 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000581842 Uniprot:J3QLH6
Length = 215
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
V P ++ +VP+ + IGG D+ ++++ +E P+KHPE F LGI P+G+L++G
Sbjct: 123 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 182
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 183 PPGTGKTLLARAVAHHTDCTFIRV 206
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
V P ++ +VP+ + IGG D+ ++++ +E P+KHPE F LGI P+G+L++G
Sbjct: 54 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 113
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 114 PPGTGKTLLARAVAHHTDCTFIRV 137
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 192 (72.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P+V ++D+GG D K ++R++VE PL + + ++GI PPRG+L++GPPG KTM+ K
Sbjct: 127 ERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVK 186
Query: 291 ALATESKLNFISV 303
A+A + NFI V
Sbjct: 187 AVANSTAANFIRV 199
Score = 155 (59.6 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 55/225 (24%), Positives = 92/225 (40%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT L+ ++A+ + + + ++ K+ GE ++ F
Sbjct: 164 GIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMA 223
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+TQ+D + A V ++ T
Sbjct: 224 RENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQ-GANVKVIMATNR 282
Query: 124 LDNVDVSLRTPGRLDQEIELP-VPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD++IE P R QR + + K+ L + ++ FI
Sbjct: 283 ADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKM---LLSPEVDLDTFIMRPDA 339
Query: 183 GGDXXXXXXXXXXXXXVETEGTGQVLSYDGVMRALDHVKPSAMRQ 227
+ G +L D VKP+ M Q
Sbjct: 340 SSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQ 384
>TAIR|locus:2083681 [details] [associations]
symbol:AT3G15120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0009506 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
IPI:IPI00537350 RefSeq:NP_188130.1 UniGene:At.39103 PRIDE:F4IXH3
EnsemblPlants:AT3G15120.1 GeneID:820743 KEGG:ath:AT3G15120
OMA:LLGPIND Uniprot:F4IXH3
Length = 1954
Score = 198 (74.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 61/184 (33%), Positives = 90/184 (48%)
Query: 9 GMKKCNGILIYGVNGTGKT----SLIHSLA-SHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
G+ GIL++G GTGKT +LI SLA + ++ + AD K+ G+AE +L+
Sbjct: 749 GLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRL 808
Query: 64 AFXXXXXXXXXXXXXXXXXXXCTGRNRS-DQERR-LLSCLVTQVDRLHELQACVVLLAVT 121
F R+R DQ ++S L+ +D L + VV++ T
Sbjct: 809 LFQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSSVVSTLLALLDGLKS-RGSVVVIGAT 867
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGF 181
D +D +LR PGR D+EI P+PS D RAAI+ K P +S ++ +A T GF
Sbjct: 868 NYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYLLKWIAKETAGF 927
Query: 182 VGGD 185
G D
Sbjct: 928 AGAD 931
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 237 WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
W + G + V +++ V PL +PE F LG+ PPRGIL+ G PG KT++ +AL
Sbjct: 718 WDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRAL 773
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 192 (72.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P+ +SDIGG D K ++R++VE PL H + ++GI PPRG+L++GPPG KTM+AK
Sbjct: 143 EKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAK 202
Query: 291 ALATESKLNFISV 303
A+A + FI V
Sbjct: 203 AVAHHTSAAFIRV 215
Score = 166 (63.5 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT L ++A H + + ++ K+ GE ++ F
Sbjct: 180 GIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLA 239
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D ++ V ++ T
Sbjct: 240 RENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGF-DVSVNVKVIMATNR 298
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
D +D +L PGRLD++IE P+P R Q+ I + +K+ S D
Sbjct: 299 QDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVD 344
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 192 (72.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 35/98 (35%), Positives = 61/98 (62%)
Query: 206 QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFA 265
+ +S GV++ D P + + P +SDIGG + ++++SVE PL HPE +
Sbjct: 152 KTMSIVGVLQ--DDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYE 209
Query: 266 RLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+GIKPP+G++++G PG KT++AKA+A ++ F+ +
Sbjct: 210 EMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRI 247
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 42/166 (25%), Positives = 74/166 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + I +++ K+ G+ + F
Sbjct: 212 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVA 271
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R + S ER R + L+ Q+D + V++A T
Sbjct: 272 GENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMA-TNK 330
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
++ +D +L PGR+D++I P + IL +K+ +LS D
Sbjct: 331 IETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKM--NLSED 374
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 192 (72.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ PS + E P+V + D+GG E +LR+ VE PL PE F +LGI PP+GI+++G
Sbjct: 161 IDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYG 220
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 221 PPGTGKTLCARAVANRTDATFIRV 244
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 37/152 (24%), Positives = 66/152 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ GI++YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 209 GIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 268
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+TQ+D VL A T
Sbjct: 269 RTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFA-TNR 327
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL 155
+ +D +L PGR+D+++E +P + RA IL
Sbjct: 328 PNTLDEALMRPGRIDRKVEFGLPDLEGRAHIL 359
>POMBASE|SPCC24B10.10c [details] [associations]
symbol:yta4 "mitochondrial outer membrane ATPase
Msp1/Yta4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPCC24B10.10c
GO:GO:0005524 GO:GO:0006626 GO:GO:0005741 EMBL:CU329672
GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000225141
OMA:VINPLHI OrthoDB:EOG4BVW3J PIR:T50417 RefSeq:NP_588013.1
ProteinModelPortal:Q9P7J5 EnsemblFungi:SPCC24B10.10c.1
GeneID:2539116 KEGG:spo:SPCC24B10.10c NextBio:20800288
Uniprot:Q9P7J5
Length = 355
Score = 190 (71.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 40/84 (47%), Positives = 56/84 (66%)
Query: 224 AMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLG--IKPPRGILMFGPP 281
A + VL +V + DIGG DE +L Q V +PLK+PE F G + P+G+L++GPP
Sbjct: 75 ASQLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPP 134
Query: 282 GCSKTMIAKALATESKLNFISVKI 305
GC KTM+AKALA +S+ FI+V +
Sbjct: 135 GCGKTMLAKALAKQSQATFINVSV 158
Score = 146 (56.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 9 GMKKC-NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXX 67
G+ C G+L+YG G GKT L +LA + + + V + K++GE+ + A F
Sbjct: 120 GLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTL 179
Query: 68 XXXXXXXXXXXXXXXXXCTGRNRSDQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
R R+D E ++ + ++ D L Q+ V++L T
Sbjct: 180 ARKLEPTIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLGATNRPA 239
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
++D ++R R+ + +P+P+ +QR IL L KVP + D
Sbjct: 240 DIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFD 281
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 183 (69.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 144 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 203
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 204 ACAAQTKATFLKL 216
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 190 (71.9 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 99 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 158
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 159 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 190
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 152 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 211
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 212 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 270
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 271 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 328
Query: 180 GFVGGD 185
GF G D
Sbjct: 329 GFNGAD 334
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 191 (72.3 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P+V ++D+GG D K ++R++VE PL + + ++GI PPRG+L++GPPG KTM+ K
Sbjct: 165 EKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVK 224
Query: 291 ALATESKLNFISV 303
A+A +K FI V
Sbjct: 225 AVANSTKAAFIRV 237
Score = 158 (60.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 46/160 (28%), Positives = 77/160 (48%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG GTGKT L+ ++A+ K + + ++ K+ GE ++ F
Sbjct: 202 GIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLA 261
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R SD+E +R+L L+TQ+D + V++A T
Sbjct: 262 RENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMA-TNR 320
Query: 124 LDNVDVSLRTPGRLDQEIELP-VPSRDQRAAILHCLLTKV 162
D +D +L PGRLD++IE P + R +R I + +K+
Sbjct: 321 ADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKM 360
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 191 (72.3 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L P E + + IGG E +LR+ +E PLK+PE F R+GIKP
Sbjct: 155 IMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKP 214
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFI 301
P+G+L++GPPG KT++AKA+A NFI
Sbjct: 215 PKGVLLYGPPGTGKTLLAKAVAATIGANFI 244
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 52/186 (27%), Positives = 86/186 (46%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+K G+L+YG GTGKT L ++A+ + + + + + K+ GE+ ++ F
Sbjct: 208 QRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMF 267
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+TQ+D L +++A
Sbjct: 268 AYAKEHEPCIIFMDEVDAI-GGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMA 326
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD+++E+P+P+ R I KV + D + ++
Sbjct: 327 -TNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFD-FEAAVKMSD 384
Query: 180 GFVGGD 185
GF G D
Sbjct: 385 GFNGAD 390
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 190 (71.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 190 (71.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 190 (71.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 190 (71.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 190 (71.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 191 (72.3 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++G PG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGAPGTGKTLLAKAVANQTSATFLRV 250
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/169 (22%), Positives = 77/169 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQI 171
+ +D +L PGR+D++IE P+P + I +H V +S D +
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDL 383
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 191 (72.3 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV+ +D P + + P ++DIGG D ++++SVE PL HPE + +GIKP
Sbjct: 161 GVL--MDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++G PG KT++AKA+A ++ F+ V
Sbjct: 219 PKGVILYGAPGTGKTLLAKAVANQTSATFLRV 250
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 37/169 (21%), Positives = 77/169 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 215 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V ++ T +
Sbjct: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI--LHCLLTKVPHSLSTDQI 171
+ +D +L PGR+D++IE P+P + I +H V ++ D +
Sbjct: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDL 383
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 191 (72.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 36/98 (36%), Positives = 62/98 (63%)
Query: 206 QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFA 265
+VLS G+++ D V P + + P ++DIGG + +++++VE PL HPE +
Sbjct: 158 KVLSVVGILQ--DEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYE 215
Query: 266 RLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+GIKPP+G++++G PG KT++AKA+A + F+ V
Sbjct: 216 DIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRV 253
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 218 GIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S ER R + L+ Q+D V+LA T
Sbjct: 278 DDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILA-TNR 336
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
++++D +L PGR+D++IE P+P R I +K+ +LS D +++ F
Sbjct: 337 IESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKM--TLSEDVNLEEFVMTKDEFS 394
Query: 183 GGD 185
G D
Sbjct: 395 GAD 397
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 191 (72.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 36/98 (36%), Positives = 62/98 (63%)
Query: 206 QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFA 265
+VLS G+++ D V P + + P ++DIGG + +++++VE PL HPE +
Sbjct: 158 KVLSVVGILQ--DEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYE 215
Query: 266 RLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+GIKPP+G++++G PG KT++AKA+A + F+ V
Sbjct: 216 DIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRV 253
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 218 GIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S ER R + L+ Q+D V+LA T
Sbjct: 278 DDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILA-TNR 336
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFV 182
++++D +L PGR+D++IE P+P R I +K+ +L+ D +++ F
Sbjct: 337 IESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKM--TLAEDVNLEEFVMTKDEFS 394
Query: 183 GGD 185
G D
Sbjct: 395 GAD 397
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 190 (71.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 113 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 172
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 173 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 204
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 166 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 225
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 226 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 284
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 285 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 342
Query: 180 GFVGGD 185
GF G D
Sbjct: 343 GFNGAD 348
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 190 (71.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 121 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 180
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 181 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 174 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 233
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 234 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 292
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 293 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 350
Query: 180 GFVGGD 185
GF G D
Sbjct: 351 GFNGAD 356
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 190 (71.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 121 IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 180
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 181 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 174 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 233
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 234 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 292
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 293 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 350
Query: 180 GFVGGD 185
GF G D
Sbjct: 351 GFNGAD 356
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 190 (71.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 37/84 (44%), Positives = 51/84 (60%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
+ PS + + P+V + D+GG E KLR+ VE PL PE F LGI PP+G L++G
Sbjct: 167 IDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYG 226
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT+ A+A+A + FI V
Sbjct: 227 PPGTGKTLCARAVANRTDATFIRV 250
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 35/152 (23%), Positives = 66/152 (43%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G L+YG GTGKT ++A+ + + +++ K+ GE ++ F
Sbjct: 215 GIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 274
Query: 69 XXXXX-----XXXXXXXXXXXCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
G ++ +R + L+TQ+D + + + ++ T
Sbjct: 275 RTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGF-DARGNIKVMFATNR 333
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL 155
+D +L PGR+D++IE +P + RA IL
Sbjct: 334 PSTLDPALMRPGRIDRKIEFSLPDVEGRANIL 365
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 189 (71.6 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 35/98 (35%), Positives = 61/98 (62%)
Query: 206 QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFA 265
+ +S G++ LD P L + P ++DIGG + +++++VE PL HPE +
Sbjct: 161 KAMSIVGLL--LDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYE 218
Query: 266 RLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+GIKPP+G++++G PG KT++AKA+A ++ F+ V
Sbjct: 219 EMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRV 256
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 37/172 (21%), Positives = 77/172 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 221 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAA 280
Query: 69 XXXXXXXXXXXXXXXXCTGRN--RSDQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +S ER R + L+ Q+D Q + ++ T
Sbjct: 281 EEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNR 340
Query: 124 LDNVDVSLRTPGRLDQEI--ELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQ 173
+ ++D +L PGR+D++I E P + ++ +H + ++ +++ Q
Sbjct: 341 ISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQ 392
>DICTYBASE|DDB_G0268334 [details] [associations]
symbol:DDB_G0268334 "Probable 26S protease subunit
YTA6" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0268334 GO:GO:0005524 EMBL:AAFI02000003
eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
ProtClustDB:CLSZ2729356 RefSeq:XP_647261.1
ProteinModelPortal:Q55GC3 EnsemblProtists:DDB0202133 GeneID:8616066
KEGG:ddi:DDB_G0268334 InParanoid:Q55GC3 OMA:TENENEA Uniprot:Q55GC3
Length = 792
Score = 192 (72.6 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 211 DGVMRALDHVKPSAM-RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGI 269
D +R L+ V + ++L + VKW DI G EVK ++ + V +P+ PE F L I
Sbjct: 492 DDKLRNLEPVMLERICNEILDKRQEVKWGDIAGLSEVKSQIMEMVVFPIIRPELFKGLRI 551
Query: 270 KPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PP+G+L+FGPPG KTMI KA+AT+ K F S+
Sbjct: 552 -PPKGLLLFGPPGTGKTMIGKAIATQVKATFFSI 584
Score = 171 (65.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 56/237 (23%), Positives = 102/237 (43%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L++G GTGKT + ++A+ +K I + + SK+ GE E ++ F
Sbjct: 555 GLLLFGPPGTGKTMIGKAIATQVKATFFSISASTLTSKWIGEGEKMVRCLFAVARCFLPS 614
Query: 75 XXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLH-ELQACVVLLAVTTSLDNVDVSL 131
R ++ E RR+ + + Q D + + ++L+ T D +D +
Sbjct: 615 VIFIDEIDSLLAARTENENEASRRIKTEFLIQWDGVAGNAEDQMLLIGATNRPDELDEAA 674
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDXXXXXX 191
R R+ + + +P+P + R A++ LL H +S D +Q +A I+ G+ G D
Sbjct: 675 RR--RMTKRLYIPLPDNESRLALVKNLLKNENHEISPDDMQNIASISDGYSGADMKSLST 732
Query: 192 XXXXX---------XXVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSD 239
VE E + D ++ A+ VKPS ++ L + W+D
Sbjct: 733 EAAYQPIRDLRGEIESVEKESIRPICLNDFLL-AVKRVKPSVAKKELDAY--IDWND 786
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 178 (67.7 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
V P ++ +VP+ + IGG D+ ++++ +E P+KHPE F LGI P+G+L++G
Sbjct: 82 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 141
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 142 PPGTGKTLLARAVAHHTDCTFIRV 165
>UNIPROTKB|I3LEM5 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
OMA:KINQQRP Ensembl:ENSSSCT00000029670 Uniprot:I3LEM5
Length = 355
Score = 186 (70.5 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + + PN+KW+DI G D K ++++V +P+++P+ F + + P +G+L++GPPG K
Sbjct: 193 RDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGK 251
Query: 286 TMIAKALATESKLNFISV 303
T++AKA+ATE K F ++
Sbjct: 252 TLLAKAVATECKTTFFNI 269
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 188 (71.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 34/92 (36%), Positives = 58/92 (63%)
Query: 212 GVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
GV++ D P L + P ++DIGG + ++++SVE PL HPE + +GIKP
Sbjct: 162 GVLQ--DDADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKP 219
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G++++G PG KT++AKA+A ++ F+ +
Sbjct: 220 PKGVILYGAPGTGKTLLAKAVANQTSATFLRI 251
Score = 122 (48.0 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 42/166 (25%), Positives = 75/166 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + I +++ K+ G+ + F
Sbjct: 216 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIA 275
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQ--ER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R S ER R + L+ Q+D + V++A T
Sbjct: 276 ADHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMA-TNK 334
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
++++D +L PGR+D++I P + + IL +K+ SL+ D
Sbjct: 335 IESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKM--SLADD 378
>UNIPROTKB|J9P5W4 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
EMBL:AAEX03005370 EMBL:AAEX03005368 EMBL:AAEX03005369
EMBL:AAEX03005371 Ensembl:ENSCAFT00000045108 Uniprot:J9P5W4
Length = 378
Score = 186 (70.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 32/95 (33%), Positives = 60/95 (63%)
Query: 209 SYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLG 268
++ G+ + + R + + PN+KW DI G D K ++++V +P+++P+ F +
Sbjct: 65 AFIGMNSEMRELAAMVSRDIYLHNPNIKWDDIIGLDTAKQLVKEAVVYPIRYPQLFTGI- 123
Query: 269 IKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ P +G+L++GPPG KT++AKA+ATE K F ++
Sbjct: 124 LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNI 158
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L ++A+ K I + + SK+ G++E ++ F
Sbjct: 129 GLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS 188
Query: 75 XXXXXXXXXXCTGRNRS---DQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
+ R + + E R+ + L+ Q+D L + V +LA + +D
Sbjct: 189 TIFLDELESVMSQRGTAPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDC 248
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAF-----ITHGFVGG 184
++ RL++ I + +PSR+ R A+++ L V S + + ++ + T G+ G
Sbjct: 249 AMLR--RLEKRILVDLPSREARRAMIYHWLPPVSKSRALELRTELEYGVLSQETEGYSGS 306
Query: 185 D 185
D
Sbjct: 307 D 307
>CGD|CAL0000992 [details] [associations]
symbol:VPS4 species:5476 "Candida albicans" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0000815
"ESCRT III complex" evidence=ISS] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0071285 "cellular response to lithium ion" evidence=IMP]
[GO:0030448 "hyphal growth" evidence=IMP] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0045053 "protein retention in Golgi
apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0016125
"sterol metabolic process" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405 GO:GO:0009306
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 GO:GO:0030448 GO:GO:0007033 GO:GO:0006623
GO:GO:0045324 GO:GO:0000815 GO:GO:0071285 EMBL:AACQ01000022
GO:GO:0044182 SMART:SM00745 KO:K12196 RefSeq:XP_720644.1
ProteinModelPortal:Q5AG40 SMR:Q5AG40 STRING:Q5AG40 GeneID:3637703
KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 228 VLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
+L E PNVKWSDI G D K L+++V P+K P+ F KP GIL++GPPG K+
Sbjct: 125 ILSEKPNVKWSDIAGLDAAKEALKEAVILPVKFPQLFVG-NRKPTSGILLYGPPGTGKSY 183
Query: 288 IAKALATESKLNFISV 303
+AKA+ATE+ F SV
Sbjct: 184 LAKAVATEANSTFFSV 199
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 11 KKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXX 70
K +GIL+YG GTGK+ L ++A+ + +D+ SK+ GE+E +K F
Sbjct: 166 KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARE 225
Query: 71 XXXXXXXXXXXXXXC--TGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVD 128
C G S+ RR+ + L+ Q++ + V++L T +D
Sbjct: 226 NKPSIIFIDEVDALCGPRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLD 285
Query: 129 VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
++R R ++ I + +P + R + + VP + + +A +T G+ G D
Sbjct: 286 AAVRR--RFERRIYIALPDVEARTRMFEINIGDVPCECTPHDYRTLAEMTDGYSGHD 340
>UNIPROTKB|Q5AG40 [details] [associations]
symbol:VPS4 "Potential vacuolar sorting ATPase"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405
GO:GO:0009306 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030448 GO:GO:0007033
GO:GO:0006623 GO:GO:0045324 GO:GO:0000815 GO:GO:0071285
EMBL:AACQ01000022 GO:GO:0044182 SMART:SM00745 KO:K12196
RefSeq:XP_720644.1 ProteinModelPortal:Q5AG40 SMR:Q5AG40
STRING:Q5AG40 GeneID:3637703 KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 228 VLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
+L E PNVKWSDI G D K L+++V P+K P+ F KP GIL++GPPG K+
Sbjct: 125 ILSEKPNVKWSDIAGLDAAKEALKEAVILPVKFPQLFVG-NRKPTSGILLYGPPGTGKSY 183
Query: 288 IAKALATESKLNFISV 303
+AKA+ATE+ F SV
Sbjct: 184 LAKAVATEANSTFFSV 199
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 11 KKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXX 70
K +GIL+YG GTGK+ L ++A+ + +D+ SK+ GE+E +K F
Sbjct: 166 KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARE 225
Query: 71 XXXXXXXXXXXXXXC--TGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVD 128
C G S+ RR+ + L+ Q++ + V++L T +D
Sbjct: 226 NKPSIIFIDEVDALCGPRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLD 285
Query: 129 VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
++R R ++ I + +P + R + + VP + + +A +T G+ G D
Sbjct: 286 AAVRR--RFERRIYIALPDVEARTRMFEINIGDVPCECTPHDYRTLAEMTDGYSGHD 340
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/98 (35%), Positives = 60/98 (61%)
Query: 206 QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFA 265
+ LS GV+ V P + + P +SDIGG + ++++++E PL HPE +
Sbjct: 154 KTLSVVGVIDG--EVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYE 211
Query: 266 RLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+GIKPP+G++++G PG KT++AKA+A ++ F+ V
Sbjct: 212 EIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRV 249
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 41/182 (22%), Positives = 81/182 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + + +++ K+ G+ ++ F
Sbjct: 214 GIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSL 124
T R ++S ER + ++ +++L A V ++ T +
Sbjct: 274 DECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRI 333
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVG 183
+ +D +L PGR+D++IE P+P + I K+ +LS D +++ G
Sbjct: 334 ETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKM--NLSEDVNLEEFVMSKDDLSG 391
Query: 184 GD 185
D
Sbjct: 392 AD 393
>UNIPROTKB|F1M2L9 [details] [associations]
symbol:Katnal2 "Protein Katnal2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
RGD:1564708 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
GO:GO:0017111 GeneTree:ENSGT00550000074466 IPI:IPI00763458
Ensembl:ENSRNOT00000023967 Uniprot:F1M2L9
Length = 392
Score = 186 (70.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + + PN+KW+DI G D K ++++V +P+++P+ F + + P +G+L++GPPG K
Sbjct: 226 RDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGK 284
Query: 286 TMIAKALATESKLNFISV 303
T++AKA+ATE K F ++
Sbjct: 285 TLLAKAVATECKTTFFNI 302
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 186 (70.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + NV +++IGG + +LR+ +E PL +P+ F R+GI P
Sbjct: 116 IMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISP 175
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 176 PKGCLLYGPPGTGKTLLARAIASQMDANFLKV 207
Score = 142 (55.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G L+YG GTGKT L ++AS M + + + + + K+ GE+ ++ F
Sbjct: 172 GISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYA 231
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLAVTT 122
GR S D+E +R L L+ Q+D L +++A T
Sbjct: 232 RDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMA-TN 289
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL 155
D +D +L PGRLD+++E+P+P+ R IL
Sbjct: 290 RPDTLDPALLRPGRLDRKLEIPLPNEVARMDIL 322
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 187 (70.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 206 QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFA 265
+ +S GV+ S M+ L + P ++DIGG + ++R+SVE PL HPE +
Sbjct: 174 KTVSVVGVLTEESDPLVSVMK--LDKAPTESYADIGGLESQIQEVRESVELPLLHPELYE 231
Query: 266 RLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+GIKPP+G++++G PG KT++AKA+A ++ F+ +
Sbjct: 232 EMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRI 269
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 41/166 (24%), Positives = 75/166 (45%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+K G+++YG GTGKT L ++A+ + I +++ K+ G+ ++ F
Sbjct: 234 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVA 293
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQER---RLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R + S ER R + L+ Q+D + V++A T
Sbjct: 294 AEHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMA-TNK 352
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD 169
++ +D +L PGR+D++I P ++ + I +K+ SL D
Sbjct: 353 IETLDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKM--SLGDD 396
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 178 (67.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
V P ++ +VP+ + IGG D+ ++++ +E P+KHPE F LGI P+G+L++G
Sbjct: 123 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 182
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 183 PPGTGKTLLARAVAHHTDCTFIRV 206
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 185 (70.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PNV ++DIG D K ++ +++E PL H E + ++GI PPRG+LM+GPPGC KTM+AK +
Sbjct: 109 PNVIYADIGSMDIQKQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTV 168
Query: 293 ATESKLNFISV 303
A FI V
Sbjct: 169 AHHMIAAFIHV 179
Score = 131 (51.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G+ G+L+YG G GKT L ++A HM + + ++ K+ GE + F
Sbjct: 144 GIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLD 203
Query: 69 XXXXXXXXXXXXXXXXCTGR----NRSDQE-RRLLSCLVTQVDRLHELQACVVLLAVTTS 123
T R +D+E +R+L L+ Q+D + + ++A T
Sbjct: 204 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMA-TNR 262
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLT 160
D +D +L PG LD +IE P+P D R ++ +T
Sbjct: 263 KDTLDPTLLRPGHLDHKIEFPLP--DHRKRLIFSTIT 297
>UNIPROTKB|J9NYM5 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 EMBL:AAEX03005370 EMBL:AAEX03005368
EMBL:AAEX03005369 EMBL:AAEX03005371 Ensembl:ENSCAFT00000044953
Uniprot:J9NYM5
Length = 431
Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 32/95 (33%), Positives = 60/95 (63%)
Query: 209 SYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLG 268
++ G+ + + R + + PN+KW DI G D K ++++V +P+++P+ F +
Sbjct: 197 AFIGMNSEMRELAAMVSRDIYLHNPNIKWDDIIGLDTAKQLVKEAVVYPIRYPQLFTGI- 255
Query: 269 IKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ P +G+L++GPPG KT++AKA+ATE K F ++
Sbjct: 256 LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNI 290
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L ++A+ K I + + SK+ G++E ++ F
Sbjct: 261 GLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS 320
Query: 75 XXXXXXXXXXCTGRNRS---DQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
+ R + + E R+ + L+ Q+D L + V +LA + +D
Sbjct: 321 TIFLDELESVMSQRGTAPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDC 380
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHS 165
++ RL++ I + +PSR+ R A+++ L V S
Sbjct: 381 AMLR--RLEKRILVDLPSREARRAMIYHWLPPVSKS 414
>POMBASE|SPAC2G11.06 [details] [associations]
symbol:vps4 "AAA family ATPase Vps4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISS] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC2G11.06 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0010008
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043328 SMART:SM00745 GO:GO:0045053 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:L33456 PIR:T38572 RefSeq:NP_593086.1
ProteinModelPortal:Q09803 SMR:Q09803 STRING:Q09803
EnsemblFungi:SPAC2G11.06.1 GeneID:2542054 KEGG:spo:SPAC2G11.06
OrthoDB:EOG4V1B8K NextBio:20803129 Uniprot:Q09803
Length = 432
Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 202 EGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHP 261
EG+ + + + ++ + +LVE PNV+W DI G + K L+++V P+K P
Sbjct: 93 EGSNSPTANEALDSDAKKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLP 152
Query: 262 EAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ F+ G KP GIL++GPPG K+ +AKA+ATE+ F S+
Sbjct: 153 QLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSI 193
Score = 181 (68.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 48/183 (26%), Positives = 92/183 (50%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L S+G K +GIL+YG GTGK+ L ++A+ I +D+ SK+ GE+E ++
Sbjct: 154 LFSHGRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQL 213
Query: 65 FXXXXXXXXXXXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTT 122
F C R+ + E RR+ + + Q++ + + ++ V++L T
Sbjct: 214 FEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATN 273
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+D ++R R ++ I +P+P+ RA + + K+P L++ +++A +T G+
Sbjct: 274 IPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYS 331
Query: 183 GGD 185
G D
Sbjct: 332 GSD 334
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 185 (70.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + +V +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 185 (70.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + +V +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 107 IMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 166
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 160 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 219
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 220 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 278
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 279 -TNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDIDY-EAIVKLSD 336
Query: 180 GFVGGD 185
GF G D
Sbjct: 337 GFNGAD 342
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 185 (70.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 213 VMRALDH-VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKP 271
+MR L V P + +V +S+IGG E +LR+ +E PL +PE F R+GI P
Sbjct: 121 IMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP 180
Query: 272 PRGILMFGPPGCSKTMIAKALATESKLNFISV 303
P+G L++GPPG KT++A+A+A++ NF+ V
Sbjct: 181 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 6 QSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAF 65
Q G+ G L+YG GTGKT L ++AS + + + + + + K+ GE+ ++ F
Sbjct: 174 QRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMF 233
Query: 66 XXXXXXXXXXXXXXXXXXXCTGRNRS-----DQE-RRLLSCLVTQVDRLHELQACVVLLA 119
GR S D+E +R L L+ Q+D L +++A
Sbjct: 234 NYARDHQPCIIFMDEIDAI-GGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMA 292
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLD++I + +P+ R IL + D + + ++
Sbjct: 293 -TNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-EAIVKLSD 350
Query: 180 GFVGGD 185
GF G D
Sbjct: 351 GFNGAD 356
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 182 (69.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 228 VLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
VL EVP+V ++DIGG ++R +VE P H E + ++PP+G+L++GPPGC KT+
Sbjct: 242 VLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTL 301
Query: 288 IAKALA 293
IAKA+A
Sbjct: 302 IAKAVA 307
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 93 QERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGR 136
+ R+ L L +VDRL + + +L T D VDV T GR
Sbjct: 79 EARQQLLALREEVDRLGQPPSGYGVLLATHDDDTVDVF--TSGR 120
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 220 VKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFG 279
V P ++ +VP+ + IGG D+ ++++ +E P+KHPE F LGI P+G+L++G
Sbjct: 112 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 171
Query: 280 PPGCSKTMIAKALATESKLNFISV 303
PPG KT++A+A+A + FI V
Sbjct: 172 PPGTGKTLLARAVAHHTDCTFIRV 195
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 170 (64.9 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
AL P+++ V ++ +K+ IGG E + L +++++P K+ FA+ ++ G+
Sbjct: 832 ALKGFTPASLHNVSLQSSTIKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSGL 891
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L++G PGC KT++A A+A E LNFISVK
Sbjct: 892 LLYGYPGCGKTLLASAVAGECGLNFISVK 920
Score = 159 (61.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/178 (25%), Positives = 86/178 (48%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+G+L+YG G GKT L ++A ++ + ++ ++ +K+ G +E ++ F
Sbjct: 889 SGLLLYGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKP 948
Query: 74 XXXXXXXXXXXCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
G + + R+++ L+TQ+D L V +LA T+ D +D +L
Sbjct: 949 CVLFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLSG-VYVLAATSRPDLIDPAL 1007
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVP---HSLSTD-QIQQVAFITHGFVGGD 185
PGRLD+ + P+ + R I+ L +KV L+ + ++ ++A T GF G D
Sbjct: 1008 LRPGRLDKSLICDFPNAEDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGAD 1065
Score = 53 (23.7 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 89 NRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQEI-ELPVPS 147
N + + R++ L V + + VVLLA + +++ + G + +EI EL P
Sbjct: 645 NDNGRSRQISEALCAIVKQYCAEDSGVVLLATAQAKESLH-GVVIGGHVVREIVELKSPD 703
Query: 148 RDQRAAILHCLLTKVPHSLSTD 169
+D R I+ + + P L TD
Sbjct: 704 KDARRKIMEAITKQGP--LITD 723
Score = 50 (22.7 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMK 38
+ +L+ G G+GKTS+ S+A+ +K
Sbjct: 554 SSVLLTGALGSGKTSVGKSIANALK 578
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 200 ETEGTGQV-LSYDGVMRALDHVKPS 223
++ G G+V + + + +ALD +PS
Sbjct: 1186 DSGGAGEVVIGWSHITKALDETRPS 1210
>RGD|1564708 [details] [associations]
symbol:Katnal2 "katanin p60 subunit A-like 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
RGD:1564708 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
GO:GO:0017111 GeneTree:ENSGT00550000074466 IPI:IPI00367223
Ensembl:ENSRNOT00000048702 Uniprot:F1M5A4
Length = 522
Score = 186 (70.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + + PN+KW+DI G D K ++++V +P+++P+ F + + P +G+L++GPPG K
Sbjct: 226 RDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGK 284
Query: 286 TMIAKALATESKLNFISV 303
T++AKA+ATE K F ++
Sbjct: 285 TLLAKAVATECKTTFFNI 302
>UNIPROTKB|E1BAN2 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 OMA:KINQQRP EMBL:DAAA02056924
EMBL:DAAA02056925 IPI:IPI00715568 Ensembl:ENSBTAT00000025744
Uniprot:E1BAN2
Length = 534
Score = 186 (70.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + + PN+KW+DI G D K ++++V +P+++P+ F + + P +G+L++GPPG K
Sbjct: 238 RDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGK 296
Query: 286 TMIAKALATESKLNFISV 303
T++AKA+ATE K F ++
Sbjct: 297 TLLAKAVATECKTTFFNI 314
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 46/181 (25%), Positives = 83/181 (45%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L ++A+ K I + + SK+ G++E ++ F
Sbjct: 285 GLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS 344
Query: 75 XXXXXXXXXXCTGRNRS---DQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
+ R + + E R+ + L+ Q+D L + V +LA + +D
Sbjct: 345 TIFLDELESVMSQRGTAPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDC 404
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHS----LSTD-QIQQVAFITHGFVGG 184
++ RL++ I + +PS++ R A++H L V S L D + ++ T G+ G
Sbjct: 405 AMLR--RLEKRILVDLPSQEAREAMIHHWLPAVSRSSALELRADLEYSLLSRETEGYSGS 462
Query: 185 D 185
D
Sbjct: 463 D 463
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 183 (69.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGI-KPPRGILMFGPPGCSKTMIAKAL 292
N+ + DIGG D + L +SV +PL PE ++ + + P G+L++GPPGC KTM+AKAL
Sbjct: 87 NITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKAL 146
Query: 293 ATESKLNFISVKI 305
A ES NFIS+++
Sbjct: 147 AKESGANFISIRM 159
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 14 NGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXX 73
+G+L+YG G GKT L +LA + + I+++ + K+YGE+ + A F
Sbjct: 127 SGVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQP 186
Query: 74 XXXXXXXXXXXCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS- 130
R+ +D E L + +T D L V+++ T ++++D +
Sbjct: 187 CIIFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLN-NGRVMIIGATNRINDIDDAF 245
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
LR RL + + +P DQR IL LL +Q +A T GF G D
Sbjct: 246 LR---RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSD 297
>UNIPROTKB|E2RK60 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 EMBL:AAEX03005370 EMBL:AAEX03005368
EMBL:AAEX03005369 EMBL:AAEX03005371 Ensembl:ENSCAFT00000027875
Uniprot:E2RK60
Length = 535
Score = 186 (70.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 32/95 (33%), Positives = 60/95 (63%)
Query: 209 SYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLG 268
++ G+ + + R + + PN+KW DI G D K ++++V +P+++P+ F +
Sbjct: 222 AFIGMNSEMRELAAMVSRDIYLHNPNIKWDDIIGLDTAKQLVKEAVVYPIRYPQLFTGI- 280
Query: 269 IKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ P +G+L++GPPG KT++AKA+ATE K F ++
Sbjct: 281 LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNI 315
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L ++A+ K I + + SK+ G++E ++ F
Sbjct: 286 GLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS 345
Query: 75 XXXXXXXXXXCTGRNRS---DQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
+ R + + E R+ + L+ Q+D L + V +LA + +D
Sbjct: 346 TIFLDELESVMSQRGTAPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDC 405
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAF-----ITHGFVGG 184
++ RL++ I + +PSR+ R A+++ L V S + + ++ + T G+ G
Sbjct: 406 AMLR--RLEKRILVDLPSREARRAMIYHWLPPVSKSRALELRTELEYGVLSQETEGYSGS 463
Query: 185 D 185
D
Sbjct: 464 D 464
>UNIPROTKB|Q8IYT4 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR006594 Pfam:PF00004 PROSITE:PS00674
PROSITE:PS50896 SMART:SM00382 SMART:SM00667 GO:GO:0005524
GO:GO:0005737 InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464
HSSP:O75351 GO:GO:0008568 GO:GO:0005874 EMBL:CH471096 EMBL:AC090373
EMBL:AC012254 EMBL:BC034999 EMBL:BI560635 EMBL:DB461284
IPI:IPI00239789 IPI:IPI00894474 RefSeq:NP_112593.2
UniGene:Hs.404137 ProteinModelPortal:Q8IYT4 SMR:Q8IYT4
IntAct:Q8IYT4 STRING:Q8IYT4 PhosphoSite:Q8IYT4 DMDM:189028467
PaxDb:Q8IYT4 PRIDE:Q8IYT4 DNASU:83473 Ensembl:ENST00000245121
Ensembl:ENST00000356157 GeneID:83473 KEGG:hsa:83473 UCSC:uc002lco.3
CTD:83473 GeneCards:GC18P044526 HGNC:HGNC:25387 MIM:614697
neXtProt:NX_Q8IYT4 PharmGKB:PA134921461 HOGENOM:HOG000225146
HOVERGEN:HBG108053 InParanoid:Q8IYT4 OMA:KINQQRP OrthoDB:EOG4P5K8V
GenomeRNAi:83473 NextBio:72401 ArrayExpress:Q8IYT4 Bgee:Q8IYT4
CleanEx:HS_KATNAL2 Genevestigator:Q8IYT4 HAMAP:MF_03025
Uniprot:Q8IYT4
Length = 538
Score = 186 (70.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + + PN+KW+DI G D K ++++V +P+++P+ F + + P +G+L++GPPG K
Sbjct: 242 RDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGK 300
Query: 286 TMIAKALATESKLNFISV 303
T++AKA+ATE K F ++
Sbjct: 301 TLLAKAVATECKTTFFNI 318
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L ++A+ K I + + SK+ G++E ++ F
Sbjct: 289 GLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS 348
Query: 75 XXXXXXXXXXCTGRNRS---DQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
+ R + + E R+ + L+ Q+D L + V +LA + +D
Sbjct: 349 TIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDC 408
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHS----LSTD-QIQQVAFITHGFVGG 184
++ RL++ I + +PSR+ R A+++ L V S L T+ + ++ T G+ G
Sbjct: 409 AMLR--RLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGS 466
Query: 185 D 185
D
Sbjct: 467 D 467
>MGI|MGI:1924234 [details] [associations]
symbol:Katnal2 "katanin p60 subunit A-like 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS00674 PROSITE:PS50896 SMART:SM00382
SMART:SM00667 MGI:MGI:1924234 GO:GO:0005524 GO:GO:0005737
InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464 HSSP:O75351
GO:GO:0008568 GO:GO:0005874 GeneTree:ENSGT00550000074466 CTD:83473
HOGENOM:HOG000225146 HOVERGEN:HBG108053 OMA:KINQQRP
OrthoDB:EOG4P5K8V HAMAP:MF_03025 EMBL:AK017114 EMBL:AC132608
EMBL:BC069977 IPI:IPI00316789 IPI:IPI00462519 IPI:IPI00894847
RefSeq:NP_081997.1 UniGene:Mm.35803 ProteinModelPortal:Q9D3R6
SMR:Q9D3R6 STRING:Q9D3R6 PhosphoSite:Q9D3R6 PRIDE:Q9D3R6
Ensembl:ENSMUST00000026486 Ensembl:ENSMUST00000126153
Ensembl:ENSMUST00000154665 GeneID:71206 KEGG:mmu:71206
UCSC:uc008fqx.1 UCSC:uc008fqz.1 InParanoid:Q9D3R6 NextBio:333285
Bgee:Q9D3R6 Genevestigator:Q9D3R6 Uniprot:Q9D3R6
Length = 539
Score = 186 (70.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
R + + PN+KW+DI G D K ++++V +P+++P+ F + + P +G+L++GPPG K
Sbjct: 243 RDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGK 301
Query: 286 TMIAKALATESKLNFISV 303
T++AKA+ATE K F ++
Sbjct: 302 TLLAKAVATECKTTFFNI 319
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 183 (69.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 125 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 184
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 185 ACAAQTKATFLKL 197
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT L + A+ K + + + F G+ ++ AF
Sbjct: 162 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALA 221
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQ--ACVVLLAVTTSL 124
T R S++ +R + ++ +++L Q V ++A T +
Sbjct: 222 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRV 281
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVG 183
D +D +L GRLD++IE P+P+ + RA I+ K+ ++S D +++A T F G
Sbjct: 282 DILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM--NVSPDVNYEELARCTDDFNG 339
>UNIPROTKB|J9PBP3 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 OMA:DLEMVLM EMBL:AAEX03005370
EMBL:AAEX03005368 EMBL:AAEX03005369 EMBL:AAEX03005371
Ensembl:ENSCAFT00000042868 Uniprot:J9PBP3
Length = 598
Score = 186 (70.5 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 32/95 (33%), Positives = 60/95 (63%)
Query: 209 SYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLG 268
++ G+ + + R + + PN+KW DI G D K ++++V +P+++P+ F +
Sbjct: 225 AFIGMNSEMRELAAMVSRDIYLHNPNIKWDDIIGLDTAKQLVKEAVVYPIRYPQLFTGI- 283
Query: 269 IKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ P +G+L++GPPG KT++AKA+ATE K F ++
Sbjct: 284 LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNI 318
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXXXXXXXX 74
G+L+YG GTGKT L ++A+ K I + + SK+ G++E ++ F
Sbjct: 289 GLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS 348
Query: 75 XXXXXXXXXXCTGRNRS---DQER--RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDV 129
+ R + + E R+ + L+ Q+D L + V +LA + +D
Sbjct: 349 TIFLDELESVMSQRGTAPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDC 408
Query: 130 SLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAF-----ITHGFVGG 184
++ RL++ I + +PSR+ R A+++ L V S + + ++ + T G+ G
Sbjct: 409 AMLR--RLEKRILVDLPSREARRAMIYHWLPPVSKSRALELRTELEYGVLSQETEGYSGS 466
Query: 185 D 185
D
Sbjct: 467 D 467
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 183 (69.5 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 129 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 188
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 189 ACAAQTKATFLKL 201
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT L + A+ K + + + F G+ ++ AF
Sbjct: 166 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALA 225
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQ--ACVVLLAVTTSL 124
T R S++ +R + ++ +++L Q V ++A T +
Sbjct: 226 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRV 285
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVG 183
D +D +L GRLD++IE P+P+ + RA I+ K+ ++S D +++A T F G
Sbjct: 286 DILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM--NVSPDVNYEELARCTDDFNG 343
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 184 (69.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 218 DHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILM 277
D P L + P ++D+GG D+ +++++VE PL HPE + +GI+PP+G+++
Sbjct: 168 DDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVIL 227
Query: 278 FGPPGCSKTMIAKALATESKLNFISV 303
+G PG KT++AKA+A ++ F+ +
Sbjct: 228 YGCPGTGKTLLAKAVANQTSATFLRI 253
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/150 (23%), Positives = 71/150 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+++YG GTGKT L ++A+ + I +++ K+ G+ ++ F
Sbjct: 218 GIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
Query: 69 XXXXXXXXXXXXXXXXCTGR--NRSDQERRLLSCLVTQVDRLH--ELQACVVLLAVTTSL 124
T R + S ER + ++ +++L + + V +L T +
Sbjct: 278 EENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRI 337
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+++D +L PGR+D++IE P+P + I
Sbjct: 338 ESLDPALIRPGRIDRKIEFPLPDEKTKRRI 367
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 183 (69.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 137 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 196
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 197 ACAAQTKATFLKL 209
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT L + A+ K + + + F G+ ++ AF
Sbjct: 174 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALA 233
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQ--ERRLLSCLVTQVDRLHELQ--ACVVLLAVTTSL 124
T R S++ +R + ++ +++L Q V ++A T +
Sbjct: 234 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRV 293
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVG 183
D +D +L GRLD++IE P+P+ + RA I+ K+ ++S D +++A T F G
Sbjct: 294 DILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM--NVSPDVNYEELARCTDDFNG 351
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 183 (69.5 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 144 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 203
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 204 ACAAQTKATFLKL 216
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT L + A+ K + + + F G+ ++ AF
Sbjct: 181 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLA 240
Query: 69 XXXXXXXXXXXXXXXXCTGRNRSDQER-------RLLSCLVTQVDRLHELQACVVLLAVT 121
G R D E+ R + L+ Q+D V ++A T
Sbjct: 241 KEKAPSIIFIDELDAI--GNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQ-VKVIAAT 297
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHG 180
+D +D +L GRLD++IE P+P+ + RA I+ K+ ++S D +++A T
Sbjct: 298 NRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM--NVSPDVNYEELARCTDD 355
Query: 181 FVG 183
F G
Sbjct: 356 FNG 358
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 183 (69.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
E P ++SDIGG D+ +L +++ P+ H E F LGI+PP+G+LM+GPPG KT++A+
Sbjct: 163 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 222
Query: 291 ALATESKLNFISV 303
A A ++K F+ +
Sbjct: 223 ACAAQTKATFLKL 235
Score = 140 (54.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 44/153 (28%), Positives = 73/153 (47%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFXXX 68
G++ G+L+YG GTGKT L + A+ K + + + F G+ ++ AF
Sbjct: 200 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALA 259
Query: 69 XXXXXXXXXXXXXXXXCTGRNRS----DQE-RRLLSCLVTQVDRLH-ELQACVVLLAVTT 122
T R S D+E +R + L+ Q+D +Q V ++A T
Sbjct: 260 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQ--VKVIAATN 317
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAIL 155
+D +D +L GRLD++IE P+P+ + RA I+
Sbjct: 318 RVDILDPALLRSGRLDRKIEFPMPNEEARARIM 350
WARNING: HSPs involving 386 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 305 273 0.0010 114 3 11 22 0.46 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 636
No. of states in DFA: 601 (64 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.43u 0.08s 21.51t Elapsed: 00:00:03
Total cpu time: 21.50u 0.09s 21.59t Elapsed: 00:00:03
Start: Thu Aug 15 13:52:02 2013 End: Thu Aug 15 13:52:05 2013
WARNINGS ISSUED: 2