BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5651
(843 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307190558|gb|EFN74545.1| Transcriptional activator protein Pur-alpha [Camponotus floridanus]
Length = 298
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL+ +
Sbjct: 44 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRDHLSTFSDFYA 103
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSE+++KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 104 SLGPPNPENVP-----DDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSQTITRGGPRTQ 158
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E +DG PEG YMR ++K F+F++ +N +G
Sbjct: 159 IAIPAQGMIEFRDALTDLLEEFGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 215
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 216 YMRISEVKT 224
>gi|156538218|ref|XP_001601888.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Nasonia vitripennis]
Length = 324
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ+K +FIK++E+ D R+QI +++S RDHL+ +
Sbjct: 42 TKMLQIQSKRFYLDVKQNKRGRFIKVAEIGADGRRSQIFLALSTASEFRDHLSTFSDYYA 101
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSE+++KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 102 SLGPPNPENVP-----DDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSQTITRGGPRTQ 156
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E +DG P+G YMR +NK F+F++ +N +G
Sbjct: 157 IAIPAQGMIEFRDALTDLLEEFGT---DDGGFKGDLPDGRYMRVDNKNFYFDIGQNNRGI 213
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 214 YMRISEVKT 222
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISDLQQEHSCPE 448
++R++LD+K N R RF+ +++ + G+ S I A + + SD P
Sbjct: 49 SKRFYLDVKQNKRGRFIKVAE-IGADGRRSQIFLALSTASEFRDHLSTFSDYYASLGPPN 107
Query: 449 DE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
E DG + M +N+R++ ++ +N +G F+R+S+ T T I I +
Sbjct: 108 PENVPDDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSQTITRGGPRTQIAIPA 161
>gi|383864047|ref|XP_003707491.1| PREDICTED: transcriptional activator protein Pur-beta-like
[Megachile rotundata]
Length = 398
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL----- 365
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R++L+
Sbjct: 57 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRNYLSTFSDFYA 116
Query: 366 ---LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+ +N P D +KSEV+ KD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 117 SLGPPSSENVP-----DDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRSQ 171
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E+ +DG PEG YMR ++K F+F++ +N +G
Sbjct: 172 IAIPAQGMIEFRDALTDLLEEYGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 228
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 229 YMRISEVKT 237
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISDLQQEHSCPE 448
++R++LD+K N R RF+ ++++ G+ S I A + + SD P
Sbjct: 64 SKRFYLDVKQNRRGRFIKVAEIG-ADGRRSQIYLALSTASEFRNYLSTFSDFYASLGPPS 122
Query: 449 DE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
E DG + M +N+R++ ++ +N +G F+R+S+ T + I I +
Sbjct: 123 SENVPDDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRSQIAIPA 176
>gi|357618157|gb|EHJ71251.1| egalitarian [Danaus plexippus]
Length = 854
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 138/239 (57%), Gaps = 18/239 (7%)
Query: 15 LMNRTNLITDVQEAQSAMATILN-----ESKVGLDLEGMDLGVDGKVSLVSLALQNGKIF 69
++ +I + +E + + +I+ +S + D EG++LG+ G ++L +A NG+++
Sbjct: 382 VLQSATVIANARECATLVDSIVGAKRSTKSIISFDCEGINLGLKGVLTLCQIATMNGEVY 441
Query: 70 IFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
+ D+ +CP ++ +GK+ E+LES+ ++K+IH D+ L + F I LKNV+DTQ A L
Sbjct: 442 LLDILACPAMVVEGKIKELLESECVVKIIHDCRNDSVNLYNQFEITLKNVFDTQAAHAVL 501
Query: 130 QLSDPRLLSQDLVP----HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSD 185
Q L Q VP + LN L + Y N K+ ++N+YR + W RPLT D
Sbjct: 502 Q------LQQQGVPVYKVKNLSLNALCELYNAPMNPMKEQLKNVYRRDQRYWARRPLTKD 555
Query: 186 MLLYAAADVESLL--ALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
M++YAA+DV SL+ A++ M+ L +N+ L + L E +F H+ P ++ R++ R+
Sbjct: 556 MIIYAASDVLSLVNPAIYAYMSANINL-ENQQLFEELSNEQVFMHIQPTEVKLRKRQRK 613
>gi|91085021|ref|XP_973667.1| PREDICTED: similar to AGAP010564-PA [Tribolium castaneum]
Length = 275
Score = 144 bits (363), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 116/194 (59%), Gaps = 7/194 (3%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ 370
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S RDHL+A +
Sbjct: 22 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRDHLSAFSDFYS 81
Query: 371 N----TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP 426
+ P + D +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S +A P
Sbjct: 82 SLGPPNPDNVPEDG-KLKSEMMIKDNRRYYLDLKENSRGRFLRVSQTITRGGPRSQVAIP 140
Query: 427 AQDLGPIIGLISDLQQEHSCPED--EDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
AQ + ++DL E S E + PEG +M +NK F+F++ +N +G +MRISE+
Sbjct: 141 AQGMIEFRDALTDLLDEFSTDEHAYKPDLPEGRHMHVDNKNFYFDIGQNNRGVYMRISEV 200
Query: 485 STPSKVLTNIGIKS 498
T + + KS
Sbjct: 201 KTNFRTAITVPEKS 214
Score = 48.1 bits (113), Expect = 0.020, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 373 PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK------LSSIAFP 426
P + + + +++L ++R++LD+K N R RF+ ++++ G + LS+ A
Sbjct: 10 PGQQGQVEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEF 69
Query: 427 AQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEIST 486
L S L + EDG + M +N+R++ ++ +N +G F+R+S+ T
Sbjct: 70 RDHLSAFSDFYSSLGPPNPDNVPEDGKLKSEMMIKDNRRYYLDLKENSRGRFLRVSQTIT 129
>gi|350413401|ref|XP_003489984.1| PREDICTED: transcriptional activator protein Pur-alpha-like isoform
1 [Bombus impatiens]
Length = 382
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 114/189 (60%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R++L+ +
Sbjct: 42 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRNYLSTFSDFYA 101
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSEV+ KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 102 SLGPPNSENVP-----DDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQ 156
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E+ +DG PEG YMR ++K F+F++ +N +G
Sbjct: 157 IAIPAQGMIEFRDALTDLLEEYGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 213
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 214 YMRISEVKT 222
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISDLQQEHSCPE 448
++R++LD+K N R RF+ ++++ G+ S I A + + SD P
Sbjct: 49 SKRFYLDVKQNRRGRFIKVAEIG-ADGRRSQIYLALSTASEFRNYLSTFSDFYASLGPPN 107
Query: 449 DE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
E DG + M +N+R++ ++ +N +G F+R+S+ T T I I +
Sbjct: 108 SENVPDDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQIAIPA 161
>gi|340717286|ref|XP_003397116.1| PREDICTED: transcriptional activator protein Pur-alpha-like [Bombus
terrestris]
Length = 382
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 114/189 (60%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R++L+ +
Sbjct: 42 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRNYLSTFSDFYA 101
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSEV+ KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 102 SLGPPNSENVP-----DDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQ 156
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E+ +DG PEG YMR ++K F+F++ +N +G
Sbjct: 157 IAIPAQGMIEFRDALTDLLEEYGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 213
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 214 YMRISEVKT 222
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISDLQQEHSCPE 448
++R++LD+K N R RF+ ++++ G+ S I A + + SD P
Sbjct: 49 SKRFYLDVKQNRRGRFIKVAEIG-ADGRRSQIYLALSTASEFRNYLSTFSDFYASLGPPN 107
Query: 449 DE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
E DG + M +N+R++ ++ +N +G F+R+S+ T T I I +
Sbjct: 108 SENVPDDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQIAIPA 161
>gi|328775950|ref|XP_001122141.2| PREDICTED: transcriptional activator protein Pur-alpha-like [Apis
mellifera]
Length = 382
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 114/189 (60%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R++L+ +
Sbjct: 42 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRNYLSTFSDFYA 101
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSEV+ KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 102 SLGPPNSENVP-----DDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQ 156
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E+ +DG PEG YMR ++K F+F++ +N +G
Sbjct: 157 IAIPAQGMIEFRDALTDLLEEYGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 213
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 214 YMRISEVKT 222
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISDLQQEHSCPE 448
++R++LD+K N R RF+ ++++ G+ S I A + + SD P
Sbjct: 49 SKRFYLDVKQNRRGRFIKVAEIG-ADGRRSQIYLALSTASEFRNYLSTFSDFYASLGPPN 107
Query: 449 DE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
E DG + M +N+R++ ++ +N +G F+R+S+ T T I I +
Sbjct: 108 SENVPDDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQIAIPA 161
>gi|307200958|gb|EFN80947.1| Transcriptional activator protein Pur-alpha [Harpegnathos saltator]
Length = 270
Score = 142 bits (358), Expect = 7e-31, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 21/201 (10%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R HL+ +
Sbjct: 12 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRKHLSTFSDFYA 71
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSE+++KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 72 SLGPPNPENVP-----DDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSQTITRGGPRTQ 126
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E +DG PEG YMR ++K F+F++ +N +G
Sbjct: 127 IAIPAQGMIEFRDALTDLLEEFGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 183
Query: 478 FMRISEISTPSKVLTNIGIKS 498
+MRISE+ T + + KS
Sbjct: 184 YMRISEVKTNFRTAITVPEKS 204
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISD 439
+ +++L ++R++LD+K N R RF+ +++ + G+ S I A + + SD
Sbjct: 10 LATKMLQIQSKRFYLDVKQNRRGRFIKVAE-IGADGRRSQIYLALSTASEFRKHLSTFSD 68
Query: 440 LQQEHSCPEDE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIG 495
P E DG + M +N+R++ ++ +N +G F+R+S+ T T I
Sbjct: 69 FYASLGPPNPENVPDDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSQTITRGGPRTQIA 128
Query: 496 IKS 498
I +
Sbjct: 129 IPA 131
>gi|350413404|ref|XP_003489985.1| PREDICTED: transcriptional activator protein Pur-alpha-like isoform
2 [Bombus impatiens]
Length = 305
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 114/189 (60%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R++L+ +
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRNYLSTFSDFYA 105
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSEV+ KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 106 SLGPPNSENVP-----DDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQ 160
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E+ +DG PEG YMR ++K F+F++ +N +G
Sbjct: 161 IAIPAQGMIEFRDALTDLLEEYGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 217
Query: 478 FMRISEIST 486
+MRISE+ T
Sbjct: 218 YMRISEVKT 226
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISDLQQEHSCPE 448
++R++LD+K N R RF+ ++++ G+ S I A + + SD P
Sbjct: 53 SKRFYLDVKQNRRGRFIKVAEIG-ADGRRSQIYLALSTASEFRNYLSTFSDFYASLGPPN 111
Query: 449 DE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
E DG + M +N+R++ ++ +N +G F+R+S+ T T I I +
Sbjct: 112 SENVPDDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQIAIPA 165
>gi|52630961|gb|AAU84944.1| putative purine-rich binding protein-alpha [Toxoptera citricida]
Length = 271
Score = 141 bits (355), Expect = 2e-30, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 14/201 (6%)
Query: 297 EKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVG 356
+++ +NE+ + TKM Q +K+FY D+KQ++ KFIK++E+ D R+QI +++S
Sbjct: 28 QQQQSNEQELA---TKMLQIQSKRFYLDVKQNRRGKFIKVAEIGADGRRSQIFLALSTAA 84
Query: 357 HLRDHLNAL--LTAHQNTPRH-RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQL 413
RDHL + P + +KSE++IKD RRY+LDLK+N R RF+ +SQ
Sbjct: 85 DFRDHLGTFSEFYSQLGPPNSDTIPEDGKLKSEMMIKDNRRYYLDLKENARGRFLRVSQT 144
Query: 414 LPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFF 468
+ GG S +A PAQ + ++DL E +DG P+G +MR +NK F+F
Sbjct: 145 ITRGGPRSQVAIPAQGMIEFRDNLTDLLDEFGT---DDGGFKGDLPDGRHMRVDNKNFYF 201
Query: 469 NVSKNGKGTFMRISEISTPSK 489
+V +N +G +MRISE++T K
Sbjct: 202 DVGQNNRGIYMRISEVTTTVK 222
Score = 40.0 bits (92), Expect = 5.1, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 788 KMTNVVPPSYRASITIPERSWDRFIETFHQTCDLYKSAECS 828
++T V ++R +IT+PE+SW RF + F C+ K AEC+
Sbjct: 216 EVTTTVKGNFRTAITVPEKSWSRFRDYFRDYCE--KMAECN 254
>gi|242020726|ref|XP_002430803.1| pur-alpha, putative [Pediculus humanus corporis]
gi|212516000|gb|EEB18065.1| pur-alpha, putative [Pediculus humanus corporis]
Length = 226
Score = 141 bits (355), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 13/195 (6%)
Query: 313 MYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN- 371
M Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S RDHL+ + +
Sbjct: 1 MLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRDHLSTFSDYYASL 60
Query: 372 ---TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQ 428
P + D +KSE++IK+ +RYFLDLK+N R RF+ +SQ +P GG S IA PAQ
Sbjct: 61 GPPNPENVPEDG-KLKSEMMIKENKRYFLDLKENSRGRFLRVSQTIPRGGPRSQIAIPAQ 119
Query: 429 DLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+ ++DL +E EDG PEG +MR NK F+F++ +N +G +MRISE
Sbjct: 120 GMIEFRDALTDLLEEFGT---EDGGYKGELPEGKHMRVENKNFYFDIGQNNRGIYMRISE 176
Query: 484 ISTPSKVLTNIGIKS 498
+ T + + KS
Sbjct: 177 VKTNFRTAITVPEKS 191
>gi|195450789|ref|XP_002072633.1| GK13584 [Drosophila willistoni]
gi|194168718|gb|EDW83619.1| GK13584 [Drosophila willistoni]
Length = 274
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 119/216 (55%), Gaps = 21/216 (9%)
Query: 282 NAKLLNNPINRMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNM 341
NA + NR A + + TKM Q +K+FY D+KQ++ +FIK++E+
Sbjct: 17 NASTMEGSSNRNDFDSTGKAGSAVEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGA 76
Query: 342 DQTRNQIHISMSVVGHLRDHLNALLTAH--------QNTPRHRYRDTHTIKSEVLIKDTR 393
D R+QI++++S RDHL++ + N P + +KSE++IKD R
Sbjct: 77 DGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPNTDNLP-----EDGKLKSEMMIKDNR 131
Query: 394 RYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA 453
RY+LDLK+N R RF+ +SQ + GG S IA PAQ + ++DL +E DG
Sbjct: 132 RYYLDLKENARGRFLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGS---NDGG 188
Query: 454 -----PEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
PE +M+ +NK F+F++ +N +G +MRISE+
Sbjct: 189 FKGELPEERHMKVDNKNFYFDIGQNNRGVYMRISEV 224
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 53 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 111
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGI 496
D PE ++ +N+R++ ++ +N +G F+R+S+ T + I +
Sbjct: 112 TDNLPEDGKLKSEMMIKDNRRYYLDLKENARGRFLRVSQTITRGGPRSQIAL 163
>gi|380017954|ref|XP_003692907.1| PREDICTED: transcriptional activator protein Pur-alpha-like [Apis
florea]
Length = 275
Score = 140 bits (354), Expect = 2e-30, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 21/201 (10%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R++L+ +
Sbjct: 16 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRNYLSTFSDFYA 75
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+N P D +KSEV+ KD RRY+LDLK+N R RF+ +SQ + GG +
Sbjct: 76 SLGPPNSENVP-----DDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQ 130
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E+ +DG PEG YMR ++K F+F++ +N +G
Sbjct: 131 IAIPAQGMIEFRDALTDLLEEYGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGI 187
Query: 478 FMRISEISTPSKVLTNIGIKS 498
+MRISE+ T + + KS
Sbjct: 188 YMRISEVKTHFRTAITVPEKS 208
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFP---AQDLGPIIGLISD 439
+ +++L ++R++LD+K N R RF+ +++ + G+ S I A + + SD
Sbjct: 14 LATKMLQIQSKRFYLDVKQNRRGRFIKVAE-IGADGRRSQIYLALSTASEFRNYLSTFSD 72
Query: 440 LQQEHSCPEDE----DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIG 495
P E DG + M +N+R++ ++ +N +G F+R+S+ T T I
Sbjct: 73 FYASLGPPNSENVPDDGKLKSEVMTKDNRRYYLDLKENTRGRFLRVSQTITRGGPRTQIA 132
Query: 496 IKS 498
I +
Sbjct: 133 IPA 135
>gi|170035946|ref|XP_001845827.1| transcriptional activator protein Pur-alpha [Culex
quinquefasciatus]
gi|167878426|gb|EDS41809.1| transcriptional activator protein Pur-alpha [Culex
quinquefasciatus]
Length = 273
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S RDHL+ +
Sbjct: 41 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRDHLSTFSDYYA 100
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 101 SLGPPNPDNVP-----EDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQ 155
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PEG +MR +NK F+F++ +N +G
Sbjct: 156 IAIPAQGMIEFRDALTDLLEEFGT---NDGGFKGELPEGRHMRVDNKNFYFDIGQNSRGI 212
Query: 478 FMRISEIST 486
+MR+SE+ +
Sbjct: 213 YMRVSEVKS 221
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 48 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIFLALSTAAEFRDHLSTFSDYYASLGPPN 106
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ +N+R++ ++ +N +G F+R+S+ T + I I +
Sbjct: 107 PDNVPEDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQIAIPA 160
>gi|157131521|ref|XP_001662270.1| pur-alpha [Aedes aegypti]
gi|108871498|gb|EAT35723.1| AAEL012134-PA [Aedes aegypti]
Length = 274
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S RDHL+ +
Sbjct: 42 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRDHLSTFSDYYA 101
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 102 SLGPPNPDNVP-----EDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQ 156
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PEG +MR +NK F+F++ +N +G
Sbjct: 157 IAIPAQGMIEFRDALTDLLEEFGT---NDGGFKGELPEGRHMRVDNKNFYFDIGQNSRGI 213
Query: 478 FMRISEIST 486
+MR+SE+ +
Sbjct: 214 YMRVSEVKS 222
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 49 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIFLALSTAAEFRDHLSTFSDYYASLGPPN 107
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ +N+R++ ++ +N +G F+R+S+ T + I I +
Sbjct: 108 PDNVPEDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQIAIPA 161
>gi|312375108|gb|EFR22538.1| hypothetical protein AND_14541 [Anopheles darlingi]
Length = 354
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S RDHL+ +
Sbjct: 122 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRDHLSTFSDYYA 181
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 182 SLGPPNPDNVP-----EDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQ 236
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PEG +MR +NK F+F++ +N +G
Sbjct: 237 IAIPAQGMIEFRDALTDLLEEFGT---NDGGYKGELPEGRHMRVDNKNFYFDIGQNSRGI 293
Query: 478 FMRISEIST 486
+MR+SE+ +
Sbjct: 294 YMRVSEVKS 302
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 129 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIFLALSTAAEFRDHLSTFSDYYASLGPPN 187
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ +N+R++ ++ +N +G F+R+S+ T + I I +
Sbjct: 188 PDNVPEDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQIAIPA 241
>gi|158293209|ref|XP_314537.4| AGAP010564-PA [Anopheles gambiae str. PEST]
gi|157016848|gb|EAA09967.5| AGAP010564-PA [Anopheles gambiae str. PEST]
Length = 294
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 21/189 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S RDHL+ +
Sbjct: 62 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRDHLSTFSDYYA 121
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 122 SLGPPNPDNVP-----EDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQ 176
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PEG +MR +NK F+F++ +N +G
Sbjct: 177 IAIPAQGMIEFRDALTDLLEEFGT---NDGGYKGELPEGRHMRVDNKNFYFDIGQNSRGI 233
Query: 478 FMRISEIST 486
+MR+SE+ +
Sbjct: 234 YMRVSEVKS 242
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 69 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIFLALSTAAEFRDHLSTFSDYYASLGPPN 127
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ +N+R++ ++ +N +G F+R+S+ T + I I +
Sbjct: 128 PDNVPEDGKLKSEMMIKDNRRYYLDLKENVRGRFLRVSQTITRGGPRSQIAIPA 181
>gi|270009024|gb|EFA05472.1| hypothetical protein TcasGA2_TC015655 [Tribolium castaneum]
Length = 346
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 297 EKESANEERIEV-IDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVV 355
E + + ++E + TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S
Sbjct: 78 EYDPGQQGQVEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTA 137
Query: 356 GHLRDHLNALLTAHQN----TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTIS 411
RDHL+A + + P + D +KSE++IKD RRY+LDLK+N R RF+ +S
Sbjct: 138 AEFRDHLSAFSDFYSSLGPPNPDNVPEDG-KLKSEMMIKDNRRYYLDLKENSRGRFLRVS 196
Query: 412 QLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPED--EDGAPEGNYMRCNNKRFFFN 469
Q + GG S +A PAQ + ++DL E S E + PEG +M +NK F+F+
Sbjct: 197 QTITRGGPRSQVAIPAQGMIEFRDALTDLLDEFSTDEHAYKPDLPEGRHMHVDNKNFYFD 256
Query: 470 VSKNGKGTFMRISEIST 486
+ +N +G +MRISE+ T
Sbjct: 257 IGQNNRGVYMRISEVKT 273
>gi|442614416|ref|NP_001259063.1| Purine-rich binding protein-alpha, isoform G [Drosophila
melanogaster]
gi|330864851|gb|AEC46881.1| RE62347p [Drosophila melanogaster]
gi|440218150|gb|AGB96553.1| Purine-rich binding protein-alpha, isoform G [Drosophila
melanogaster]
Length = 259
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 21/187 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 31 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 90
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 91 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 145
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 146 IALPAQGMIEFRDALTDLLEEFGA---NDGGFKGDLPEERHMKVDNKNFYFDIGQNNRGV 202
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 203 YMRISEV 209
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 38 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 96
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ + +R++ ++ +N +G F+R+S+ T + I + +
Sbjct: 97 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 150
>gi|195469359|ref|XP_002099605.1| GE14552 [Drosophila yakuba]
gi|194185706|gb|EDW99317.1| GE14552 [Drosophila yakuba]
Length = 274
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 21/187 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 106 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 160
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 161 IALPAQGMIEFRDALTDLLEEFGA---NDGGFKGDLPEERHMKVDNKNFYFDIGQNNRGV 217
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 218 YMRISEV 224
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 53 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 111
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ + +R++ ++ +N +G F+R+S+ T + I + +
Sbjct: 112 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 165
>gi|24638642|ref|NP_726581.1| Purine-rich binding protein-alpha, isoform D [Drosophila
melanogaster]
gi|22759352|gb|AAN06499.1| Purine-rich binding protein-alpha, isoform D [Drosophila
melanogaster]
Length = 260
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 31 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 90
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 91 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 145
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA------PEGNYMRCNNKRFFFNVSKNGKG 476
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 146 IALPAQGMIEFRDALTDLLEEFGA---NDGGRFKGDLPEERHMKVDNKNFYFDIGQNNRG 202
Query: 477 TFMRISEI 484
+MRISE+
Sbjct: 203 VYMRISEV 210
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 38 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 96
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ + +R++ ++ +N +G F+R+S+ T + I + +
Sbjct: 97 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 150
>gi|24638638|ref|NP_726579.1| Purine-rich binding protein-alpha, isoform A [Drosophila
melanogaster]
gi|24638640|ref|NP_726580.1| Purine-rich binding protein-alpha, isoform C [Drosophila
melanogaster]
gi|442614412|ref|NP_001259061.1| Purine-rich binding protein-alpha, isoform E [Drosophila
melanogaster]
gi|16769028|gb|AAL28733.1| LD15002p [Drosophila melanogaster]
gi|22759350|gb|AAN06497.1| Purine-rich binding protein-alpha, isoform A [Drosophila
melanogaster]
gi|22759351|gb|AAN06498.1| Purine-rich binding protein-alpha, isoform C [Drosophila
melanogaster]
gi|220942990|gb|ACL84038.1| Pur-alpha-PA [synthetic construct]
gi|220953144|gb|ACL89115.1| Pur-alpha-PA [synthetic construct]
gi|440218148|gb|AGB96551.1| Purine-rich binding protein-alpha, isoform E [Drosophila
melanogaster]
Length = 274
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 21/187 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 106 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 160
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 161 IALPAQGMIEFRDALTDLLEEFGA---NDGGFKGDLPEERHMKVDNKNFYFDIGQNNRGV 217
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 218 YMRISEV 224
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 53 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 111
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ + +R++ ++ +N +G F+R+S+ T + I + +
Sbjct: 112 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 165
>gi|195354389|ref|XP_002043680.1| GM26800 [Drosophila sechellia]
gi|194128868|gb|EDW50911.1| GM26800 [Drosophila sechellia]
Length = 275
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 106 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 160
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA------PEGNYMRCNNKRFFFNVSKNGKG 476
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 161 IALPAQGMIEFRDALTDLLEEFGA---NDGGRFKGDLPEERHMKVDNKNFYFDIGQNNRG 217
Query: 477 TFMRISEI 484
+MRISE+
Sbjct: 218 VYMRISEV 225
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 53 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 111
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGI 496
D PE ++ + +R++ ++ +N +G F+R+S+ T + I +
Sbjct: 112 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIAL 163
>gi|194913550|ref|XP_001982723.1| GG16390 [Drosophila erecta]
gi|190647939|gb|EDV45242.1| GG16390 [Drosophila erecta]
Length = 274
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 21/187 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 106 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 160
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 161 IALPAQGMIEFRDALTDLLEEFGA---NDGGFKGDLPEERHMKVDNKNFYFDIGQNNRGV 217
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 218 YMRISEV 224
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 53 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 111
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ + +R++ ++ +N +G F+R+S+ T + I + +
Sbjct: 112 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 165
>gi|158292666|ref|XP_314043.4| AGAP005155-PA [Anopheles gambiae str. PEST]
gi|157017099|gb|EAA09562.4| AGAP005155-PA [Anopheles gambiae str. PEST]
Length = 1064
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 137/249 (55%), Gaps = 20/249 (8%)
Query: 15 LMNRTNLITDVQEA----QSAMATILNESK-VGLDLEGMDLGVDGKVSLVSLALQNGKIF 69
++ T +I+ V+E+ + M + L E V D EG++LGV G++++V L G+ F
Sbjct: 528 VLQNTRVISTVKESLFVTNAIMKSSLEEQAIVSFDCEGINLGVRGQITMVQLGTTRGEAF 587
Query: 70 IFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
IFD+ +CP ++ +G L E+LES++++KVIH D+ L + F I L+NV+DTQ A L
Sbjct: 588 IFDIATCPDMVVEGGLKEILESEKVIKVIHDCRNDSVNLFNQFQILLRNVFDTQSAHAVL 647
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
Q D Q + LN L + Y + N K ++N+YR + W RPLT DMLLY
Sbjct: 648 QFQDQG--KQVYKVKNVSLNTLCEMYNATVNPMKDQLKNVYRRDQKYWARRPLTRDMLLY 705
Query: 190 AAADV-----ESL-LALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQN 243
AA DV E L L + + EY R LL L E + + P++++ R+ +Q
Sbjct: 706 AAGDVLILINEQLYLNMATSIRPEY-----RELLSELCTEQILMLIRPVDVKMRK--KQR 758
Query: 244 QLRRWRKDL 252
++R +DL
Sbjct: 759 KVRSEIQDL 767
>gi|195172542|ref|XP_002027056.1| GL18143 [Drosophila persimilis]
gi|194112834|gb|EDW34877.1| GL18143 [Drosophila persimilis]
Length = 275
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 21/187 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 47 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 106
Query: 370 -------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
N P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 107 SLGPPNTDNLP-----EDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQ 161
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G
Sbjct: 162 IALPAQGMIEFRDALTDLLEEFGA---NDGGFKGDLPEERHMKVDNKNFYFDIGQNNRGV 218
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 219 YMRISEV 225
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 382 TIKSEVLIK----DTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLI 437
T++ E+ K ++R++LD+K N R RF+ ++++ G+ S I +
Sbjct: 40 TVEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHL 98
Query: 438 SDLQQEHSC--PEDEDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKV 490
S ++ P + D PE ++ + +R++ ++ +N +G F+R+S+ T
Sbjct: 99 SSFSDYYASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGP 158
Query: 491 LTNIGIKS 498
+ I + +
Sbjct: 159 RSQIALPA 166
>gi|328701761|ref|XP_001952609.2| PREDICTED: transcriptional activator protein Pur-alpha-like
[Acyrthosiphon pisum]
Length = 268
Score = 139 bits (350), Expect = 6e-30, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 16/197 (8%)
Query: 297 EKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVG 356
+++ +NE+ + TKM Q +K+FY D+KQ++ KFIK++E+ D R+QI +++S
Sbjct: 28 QQQQSNEQELA---TKMLQIQSKRFYLDVKQNRRGKFIKVAEIGADGRRSQIFLALSTAA 84
Query: 357 HLRDHLNALLTAHQN----TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ 412
RDHL + P D +KSE++IKD RRY+LDLK+N R RF+ +SQ
Sbjct: 85 DFRDHLGTFSEFYSQLGPPNPDTVPEDG-KLKSEMMIKDNRRYYLDLKENARGRFLRVSQ 143
Query: 413 LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFF 467
+ GG S +A PAQ + ++DL E +DG P+G +MR +NK F+
Sbjct: 144 TITRGGPRSQVAIPAQGMIEFRDNLTDLLDEFGT---DDGGFKGDLPDGRHMRVDNKNFY 200
Query: 468 FNVSKNGKGTFMRISEI 484
F+V +N +G +MRISE+
Sbjct: 201 FDVGQNNRGIYMRISEV 217
>gi|157129284|ref|XP_001655349.1| hypothetical protein AaeL_AAEL002475 [Aedes aegypti]
gi|108882084|gb|EAT46309.1| AAEL002475-PA [Aedes aegypti]
Length = 939
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)
Query: 33 ATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESD 92
+T +++ V D EG++LGV G+++++ L G+ FIFDV SCP ++ G + EVLES+
Sbjct: 473 STYEDQAVVSFDCEGINLGVRGQITMIQLGTTRGEAFIFDVASCPDMVPHGGIKEVLESE 532
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
+++KVIH D+ L + F I LKNV+DTQ A LQ D Q + LN L
Sbjct: 533 KVIKVIHDCRNDSVNLFNQFQILLKNVFDTQSAHAVLQFQDQG--KQVYKVKNVSLNTLC 590
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+ Y + N K ++N+YR + W RPLT DMLLYAA DV L+ + ++K
Sbjct: 591 EMYNATVNPMKDQLKNVYRRDQKYWARRPLTRDMLLYAAGDVLILINEQLYLNMATSIKA 650
Query: 213 N-RLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDL 252
R LL L E + + P++++ R+ +Q ++R +DL
Sbjct: 651 EFRELLAELCTEQILMLIRPVDVKMRK--KQRKVRSEIQDL 689
>gi|332022261|gb|EGI62576.1| Transcriptional activator protein Pur-alpha [Acromyrmex echinatior]
Length = 258
Score = 139 bits (349), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 21/199 (10%)
Query: 313 MYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH--- 369
M Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL+ +
Sbjct: 1 MLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTASEFRDHLSTFSDFYASL 60
Query: 370 -----QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIA 424
+N P D +KSE+++KD RRY+LDLK+N R RF+ +SQ + GG + IA
Sbjct: 61 GPPNPENVP-----DDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSQTITRGGPRTQIA 115
Query: 425 FPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFM 479
PAQ + ++DL +E +DG PEG YMR ++K F+F++ +N +G +M
Sbjct: 116 IPAQGMIEFRDALTDLLEEFGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGIYM 172
Query: 480 RISEISTPSKVLTNIGIKS 498
RISE+ T + + KS
Sbjct: 173 RISEVKTNFRTAITVPEKS 191
>gi|195133990|ref|XP_002011421.1| GI14049 [Drosophila mojavensis]
gi|193912044|gb|EDW10911.1| GI14049 [Drosophila mojavensis]
Length = 273
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 118/201 (58%), Gaps = 17/201 (8%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F K S+ E + + TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S
Sbjct: 30 FESGKASSAVE--QELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALS 87
Query: 354 VVGHLRDHLNALLTAH--------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRA 405
RDHL++ + N P + +KSE++IKD RRY+LDLK+N R
Sbjct: 88 TAAEFRDHLSSFSDYYASLGPPNTDNLP-----EDGKLKSEMMIKDNRRYYLDLKENARG 142
Query: 406 RFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPED--EDGAPEGNYMRCNN 463
RF+ +SQ + GG S IA PAQ + ++DL +E + + PE +M+ +N
Sbjct: 143 RFLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGANDTGFKGDLPEERHMKVDN 202
Query: 464 KRFFFNVSKNGKGTFMRISEI 484
K F+F++ +N +G +MRISE+
Sbjct: 203 KNFYFDIGQNNRGVYMRISEV 223
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PED 449
++R++LD+K N R RF+ ++++ G+ S I +S ++ P +
Sbjct: 52 SKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPN 110
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D PE ++ +N+R++ ++ +N +G F+R+S+ T + I + +
Sbjct: 111 TDNLPEDGKLKSEMMIKDNRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 164
>gi|242046488|ref|XP_002399509.1| pur-alpha, putative [Ixodes scapularis]
gi|215497550|gb|EEC07044.1| pur-alpha, putative [Ixodes scapularis]
Length = 234
Score = 137 bits (346), Expect = 2e-29, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--LTA 368
TKM Q +K+FY D+KQ++ +FIK++EV + ++++ ++MS RDHL + L A
Sbjct: 14 TKMLQIQSKRFYLDVKQNRRGRFIKVAEVGVVGRKSRLLLAMSTAAEFRDHLTSFSELYA 73
Query: 369 HQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA PA
Sbjct: 74 SLGPPNPENLPEDGKLKSEIMIKDNRRYYLDLKENSRGRFLRVSQTIARGGPRSQIAIPA 133
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFMRIS 482
Q + ++DL +E +DGA PEG +MR NK F+F++ +N +G +MRIS
Sbjct: 134 QGMIEFRDALTDLLEEFGT---DDGAFKGELPEGRHMRVENKTFYFDIGQNTRGIYMRIS 190
Query: 483 EISTPSKVLTNIGIKS 498
E+ + I KS
Sbjct: 191 EVKNNFRAAITIPEKS 206
Score = 48.1 bits (113), Expect = 0.019, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK------LSSIAFPAQDLGPIIGL 436
+ +++L ++R++LD+K N R RF+ ++++ VG K +S+ A L L
Sbjct: 12 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGVVGRKSRLLLAMSTAAEFRDHLTSFSEL 71
Query: 437 ISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+ L + EDG + M +N+R++ ++ +N +G F+R+S+
Sbjct: 72 YASLGPPNPENLPEDGKLKSEIMIKDNRRYYLDLKENSRGRFLRVSQ 118
>gi|33589402|gb|AAQ22468.1| RE33408p [Drosophila melanogaster]
Length = 1004
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 558 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 617
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 618 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 675
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 676 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 734
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 735 ELCTEQILMQIKPNEVKIRKKQR 757
>gi|221468312|ref|NP_726360.3| egalitarian [Drosophila melanogaster]
gi|220902361|gb|AAF47054.4| egalitarian [Drosophila melanogaster]
Length = 1004
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 558 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 617
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 618 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 675
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 676 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 734
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 735 ELCTEQILMQIKPNEVKIRKKQR 757
>gi|195489284|ref|XP_002092670.1| GE11539 [Drosophila yakuba]
gi|194178771|gb|EDW92382.1| GE11539 [Drosophila yakuba]
Length = 1009
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 563 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 622
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 623 CRNDAANLYLQFGILLRNVFDTQSAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 680
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 681 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 739
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 740 ELCTEQILMQIKPNEVKIRKKQR 762
>gi|38681451|gb|AAB49975.2| egalitarian [Drosophila melanogaster]
Length = 993
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 547 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 606
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 607 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 664
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 665 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 723
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 724 ELCTEQILMQIKPNEVKIRKKQR 746
>gi|321478130|gb|EFX89088.1| hypothetical protein DAPPUDRAFT_95385 [Daphnia pulex]
Length = 220
Score = 135 bits (341), Expect = 7e-29, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 12/195 (6%)
Query: 313 MYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--LTAHQ 370
M Q +K+FY D+KQ++ +FIK++E+ D R+QI +++S R HL++ A
Sbjct: 1 MLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLALSTAAEFRGHLSSFSDFYASL 60
Query: 371 NTPRH--RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQ 428
+P + + +KSE++ KD RRY+LDLK+N R RF+ +SQ + GG S IA PAQ
Sbjct: 61 GSPPNPDNLPEDGKLKSEMMTKDNRRYYLDLKENSRGRFLRVSQTIARGGPRSQIAIPAQ 120
Query: 429 DLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+ ++DL +E +DG PEG ++R NK F+F++ +N +G +MRISE
Sbjct: 121 GMIEFRDALTDLLEEFGT---DDGGFKGELPEGRHLRVENKNFYFDIGQNNRGIYMRISE 177
Query: 484 ISTPSKVLTNIGIKS 498
+ T + I KS
Sbjct: 178 VKTNYRTAVTIPEKS 192
>gi|307172596|gb|EFN63955.1| Exonuclease 3'-5' domain-like-containing protein 1 [Camponotus
floridanus]
Length = 651
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I +E+ + I+N K V D EG++LGV G+++LV + +G
Sbjct: 211 VLQQTRVIATTRESLQVIEDIINPRKPPPDGKVVVSFDCEGINLGVKGQLTLVQIGTMSG 270
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ ++FD+++CP ++ DG L ++LE ++KVIH D+ L + F I L NV+DTQ A
Sbjct: 271 QAYMFDLFTCPRLVQDGGLQKLLEHPHVIKVIHDCRNDSVNLYNQFTITLMNVFDTQAAH 330
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
LQ + + + LN L Y N K+ ++N+YR++ W RP+T DM
Sbjct: 331 AVLQFQETGKPVYKV--KNVNLNTLCDHYGAPCNPLKEQLKNIYRKDQRYWSRRPMTRDM 388
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
L+YA++DV SL+ + + + L L E + H+ P +++ R++ R+
Sbjct: 389 LIYASSDVLSLVPQVYNAMSRLIKPEVQGLFAELCEEQIQMHIRPADVKARKRQRK 444
>gi|91084227|ref|XP_969046.1| PREDICTED: similar to egalitarian CG4051-PA [Tribolium castaneum]
gi|270009271|gb|EFA05719.1| egalitarian [Tribolium castaneum]
Length = 812
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 141/251 (56%), Gaps = 29/251 (11%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK---------------VGLDLEGMDLGVDGKVSLV 59
L T +I V+E Q + I+++ K VGLD EG++LGV G+++L+
Sbjct: 376 LFQNTRVICSVRECQMVIDDIMSKVKSQMSNDWPFDDDQVVVGLDCEGINLGVKGQLTLL 435
Query: 60 SLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNV 119
+A +G ++FD+ +CP M D L ++LES +I+K++H D+ L + FNI L +
Sbjct: 436 QIATMSGFSYVFDLITCP-GMIDSGLKKLLESSQIVKIVHDCRNDSVNLFNQFNITLNTI 494
Query: 120 YDTQCAFTALQLSD---PRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI 176
+DTQ A L + P ++ ++ LN L + Y N K ++N+YR +
Sbjct: 495 FDTQAAHAVLTFQETGRPVYKAK-----SVALNALCEHYGAPINPMKDQLKNIYRRDQKY 549
Query: 177 WKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALK-QNRLLLDNLIYETLFNHVVPLN 233
W RPLT +M+LYA+ADV SL+ +++ M+K A+K +NR L L +E +F H+ P +
Sbjct: 550 WSRRPLTREMILYASADVLSLVNEKIYYPMSK--AIKMENRQLFLELCHEQIFMHIDPES 607
Query: 234 IRKRRQFRQNQ 244
++ R++ R+ +
Sbjct: 608 VKGRKRQRKTE 618
>gi|195402221|ref|XP_002059705.1| GJ19804 [Drosophila virilis]
gi|194155919|gb|EDW71103.1| GJ19804 [Drosophila virilis]
gi|263359689|gb|ACY70525.1| hypothetical protein DVIR88_6g0062 [Drosophila virilis]
Length = 274
Score = 135 bits (340), Expect = 9e-29, Method: Composition-based stats.
Identities = 70/182 (38%), Positives = 112/182 (61%), Gaps = 11/182 (6%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ 370
+KM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ +
Sbjct: 46 SKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 371 NT-PRHRYR--DTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
+ P H + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA PA
Sbjct: 106 SLGPPHTESLPEDGKLKSEMMIKDNRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 165
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFMRIS 482
Q + ++DL +E DG PE +M+ +NK F+F++ +N +G +MRIS
Sbjct: 166 QGMIEFRDALTDLLEEFGA---NDGGFKGDLPEERHMKVDNKNFYFDIGQNNRGVYMRIS 222
Query: 483 EI 484
E+
Sbjct: 223 EV 224
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK------LSSIAFPAQDLGPIIGL 436
+ S++L ++R++LD+K N R RF+ ++++ G + LS+ A L
Sbjct: 44 LASKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDY 103
Query: 437 ISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEIST 486
+ L H+ EDG + M +N+R++ ++ +N +G F+R+S+ T
Sbjct: 104 YASLGPPHTESLPEDGKLKSEMMIKDNRRYYLDLKENARGRFLRVSQTIT 153
>gi|427793839|gb|JAA62371.1| Putative transcriptional regulator of the pur family
single-stranded-dna-binding protein, partial
[Rhipicephalus pulchellus]
Length = 291
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 14/187 (7%)
Query: 309 IDTKMYQCFNKKFYFDIKQSKSTKFIKISEV---NMDQTRNQIHISMSVVGHLRDHLNAL 365
+ TKM Q +K+FY D+KQ++ +FIK++EV + ++++ ++MS RDHL +
Sbjct: 66 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVQQVGVVGRKSRLLLAMSTAAEFRDHLTSF 125
Query: 366 --LTAHQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
L A P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 126 SELYASLGPPNPENLPEDGKLKSEIMIKDNRRYYLDLKENSRGRFLRVSQTIARGGPRSQ 185
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E +DGA PEG +MR NK F+F++ +N +G
Sbjct: 186 IAIPAQGMIEFRDALTDLLEEFGT---DDGAFKGELPEGRHMRVENKTFYFDIGQNTRGI 242
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 243 YMRISEV 249
>gi|241670620|ref|XP_002399861.1| conserved hypothetical protein [Ixodes scapularis]
gi|215506210|gb|EEC15704.1| conserved hypothetical protein [Ixodes scapularis]
Length = 853
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 121/225 (53%), Gaps = 14/225 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+ LD EG++LG G ++L+ LA G++F+FDV S P + +GKL ++LES I+KV+H
Sbjct: 551 LALDAEGVNLGPRGPLTLLQLATAAGEVFLFDVQSTPQLFDEGKLKDILESQTIVKVVHD 610
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH---TIGLNDLLKFYKI 157
D+ L F IRL+NV+DTQ A LQ D Q H + L L Y
Sbjct: 611 CRNDSAALFYQFGIRLQNVFDTQAAHATLQQQD-----QGKPVHKVKNVSLGTLCGLYGG 665
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLL 217
PN ++ +++LYR + W RPL+ DM+ +AA DV LL H + + LL
Sbjct: 666 PPNPRREQVKSLYRRDQKFWSRRPLSEDMVFHAAFDVFCLLPAVHDALRGAIKPEFGPLL 725
Query: 218 DNLIYETLFNHVVPLNIRKRRQFRQ-----NQLRRWRKDLMSSKR 257
L E + +H+ P ++ R++ R+ + LRR R D S+++
Sbjct: 726 HALCEEQVLSHISPEEVKGRKKQRKVDHEVDDLRR-RLDSTSARQ 769
>gi|195026828|ref|XP_001986344.1| GH20576 [Drosophila grimshawi]
gi|193902344|gb|EDW01211.1| GH20576 [Drosophila grimshawi]
Length = 995
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 127/236 (53%), Gaps = 11/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK------VGLDLEGMDLGVDGKVSLVSLALQNGKI 68
++ T +I +V+ + +L+ +K V LD EG++LGV G+++L+ + G+
Sbjct: 514 VLQNTTVIANVKHSTFVTEALLDLAKDESNIAVSLDCEGINLGVKGEITLIEIGTARGEA 573
Query: 69 FIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA 128
F+FDV +CP ++ DG L +LE D+++KVIH DA L F I L+NV+DTQ A
Sbjct: 574 FLFDVQTCPAMVSDGGLKTLLEHDQVIKVIHDCRNDAVNLYQQFGILLRNVFDTQAAHAI 633
Query: 129 LQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLL 188
LQ + Q I LN L + Y N K ++ +YR + W RPLT +M+L
Sbjct: 634 LQYQENG--KQVYKAKYISLNSLCEQYNAPCNPIKDQLKQIYRRDQKFWAKRPLTREMML 691
Query: 189 YAAADVESLL--ALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
YAA DV L+ LF + ++ +NR+L L E + + P ++ R++ R+
Sbjct: 692 YAAGDVLVLIHDQLFGNLAQQIK-PENRVLFSELCTEQILMQIKPNEVKIRKKQRK 746
>gi|194885564|ref|XP_001976457.1| GG20003 [Drosophila erecta]
gi|190659644|gb|EDV56857.1| GG20003 [Drosophila erecta]
Length = 824
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 5/204 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 561 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 620
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 621 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 678
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 679 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 737
Query: 219 NLIYETLFNHVVPLNIRKRRQFRQ 242
L E + + P ++ R++ R+
Sbjct: 738 ELCTEQILMQIKPNEVKIRKKQRK 761
>gi|195347186|ref|XP_002040135.1| GM15515 [Drosophila sechellia]
gi|194135484|gb|EDW57000.1| GM15515 [Drosophila sechellia]
Length = 1035
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 626 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 685
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 686 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 743
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 744 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 802
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 803 ELCTEQILMQIKPNEVKIRKKQR 825
>gi|195586140|ref|XP_002082836.1| GD25020 [Drosophila simulans]
gi|194194845|gb|EDX08421.1| GD25020 [Drosophila simulans]
Length = 860
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++KVIH
Sbjct: 556 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHD 615
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 616 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 673
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 674 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENRALFS 732
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 733 ELCTEQILMQIKPNEVKIRKKQR 755
>gi|170041336|ref|XP_001848422.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864931|gb|EDS28314.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 982
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATIL-----NESKVGLDLEGMDLGVDGKVSLVSLALQNGKIF 69
++ T +I+ V+E+ IL +++ + D EG++LGV G+++++ L G+ F
Sbjct: 475 VLQNTRVISTVKESLFVTQAILKSAYEDQTVISFDCEGINLGVRGQITMIQLGTTRGEAF 534
Query: 70 IFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
IFDV +CP ++ G + +VLE+++++KVIH D+ L + F I L+NV+DTQ A L
Sbjct: 535 IFDVATCPDMVPHGGIKQVLEAEKVIKVIHDCRNDSVNLYNQFQIMLRNVFDTQSAHAVL 594
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
Q D Q + LN L + Y + N K ++N+YR + W RPLT DMLLY
Sbjct: 595 QFQDQG--KQVYKVKNVSLNTLCEMYNATVNPMKDQLKNVYRRDQKYWARRPLTRDMLLY 652
Query: 190 AAADVESLL--ALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRR 247
AA DV L+ L+ M + R LL L E + + P++++ R+ +Q ++R
Sbjct: 653 AAGDVLILINEQLYLNMATSIK-PEFRELLAELCTEQILMLIRPVDVKMRK--KQRKVRS 709
Query: 248 WRKDL 252
+DL
Sbjct: 710 EIQDL 714
>gi|24638636|ref|NP_524624.1| Purine-rich binding protein-alpha, isoform B [Drosophila
melanogaster]
gi|442614414|ref|NP_001259062.1| Purine-rich binding protein-alpha, isoform F [Drosophila
melanogaster]
gi|22759349|gb|AAF59337.2| Purine-rich binding protein-alpha, isoform B [Drosophila
melanogaster]
gi|440218149|gb|AGB96552.1| Purine-rich binding protein-alpha, isoform F [Drosophila
melanogaster]
Length = 275
Score = 134 bits (336), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--LTA 368
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ A
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 369 HQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA PA
Sbjct: 106 SLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 165
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGA------PEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
Q + ++DL +E DG PE +M+ +NK F+F++ +N +G +MRI
Sbjct: 166 QGMIEFRDALTDLLEEFGA---NDGGRFKGDLPEERHMKVDNKNFYFDIGQNNRGVYMRI 222
Query: 482 SEI 484
SE+
Sbjct: 223 SEV 225
Score = 43.1 bits (100), Expect = 0.60, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK------LSSIAFPAQDLGPIIGL 436
+ +++L ++R++LD+K N R RF+ ++++ G + LS+ A L
Sbjct: 44 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDY 103
Query: 437 ISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEIST 486
+ L ++ EDG + M + +R++ ++ +N +G F+R+S+ T
Sbjct: 104 YASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTIT 153
>gi|194755160|ref|XP_001959860.1| GF11823 [Drosophila ananassae]
gi|190621158|gb|EDV36682.1| GF11823 [Drosophila ananassae]
Length = 1018
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE ++++KVIH
Sbjct: 572 VSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMITDGGLKTVLEHEQVIKVIHD 631
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 632 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQYNAPCN 689
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +N++L
Sbjct: 690 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PENKVLFS 748
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 749 ELCTEQILMQIKPNEVKIRKKQR 771
>gi|427793099|gb|JAA62001.1| Putative transcriptional regulator of the pur family
single-stranded-dna-binding protein, partial
[Rhipicephalus pulchellus]
Length = 279
Score = 133 bits (334), Expect = 5e-28, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVN---MDQTRNQIHISMSVVGHLRDHLNAL-- 365
TKM Q +K+FY D+KQ++ +FIK++EV + ++++ ++MS RDHL +
Sbjct: 56 TKMLQIQSKRFYLDVKQNRRGRFIKVAEVQQVGVVGRKSRLLLAMSTAAEFRDHLTSFSE 115
Query: 366 LTAHQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIA 424
L A P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA
Sbjct: 116 LYASLGPPNPENLPEDGKLKSEIMIKDNRRYYLDLKENSRGRFLRVSQTIARGGPRSQIA 175
Query: 425 FPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFM 479
PAQ + ++DL +E +DGA PEG +MR NK F+F++ +N +G +M
Sbjct: 176 IPAQGMIEFRDALTDLLEEFGT---DDGAFKGELPEGRHMRVENKTFYFDIGQNTRGIYM 232
Query: 480 RISEISTPSKVLTNIGIKS 498
RISE+ + I KS
Sbjct: 233 RISEVKNNFRAAITIPEKS 251
Score = 48.9 bits (115), Expect = 0.013, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG--GKLSSIAFPAQDLGPIIGLISDL 440
+ +++L ++R++LD+K N R RF+ ++++ VG G+ S + ++
Sbjct: 54 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVQQVGVVGRKSRLLLAMSTAAEFRDHLTSF 113
Query: 441 QQEHSC-----PED--EDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+ ++ PE+ EDG + M +N+R++ ++ +N +G F+R+S+
Sbjct: 114 SELYASLGPPNPENLPEDGKLKSEIMIKDNRRYYLDLKENSRGRFLRVSQ 163
>gi|427795579|gb|JAA63241.1| Putative transcriptional regulator of the pur family
single-stranded-dna-binding protein, partial
[Rhipicephalus pulchellus]
Length = 316
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 14/187 (7%)
Query: 309 IDTKMYQCFNKKFYFDIKQSKSTKFIKISEV---NMDQTRNQIHISMSVVGHLRDHLNAL 365
+ TKM Q +K+FY D+KQ++ +FIK++EV + ++++ ++MS RDHL +
Sbjct: 91 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVQQVGVVGRKSRLLLAMSTAAEFRDHLTSF 150
Query: 366 --LTAHQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
L A P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S
Sbjct: 151 SELYASLGPPNPENLPEDGKLKSEIMIKDNRRYYLDLKENSRGRFLRVSQTIARGGPRSQ 210
Query: 423 IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGT 477
IA PAQ + ++DL +E +DGA PEG +MR NK F+F++ +N +G
Sbjct: 211 IAIPAQGMIEFRDALTDLLEEFGT---DDGAFKGELPEGRHMRVENKTFYFDIGQNTRGI 267
Query: 478 FMRISEI 484
+MRISE+
Sbjct: 268 YMRISEV 274
>gi|195455204|ref|XP_002074609.1| GK23167 [Drosophila willistoni]
gi|194170694|gb|EDW85595.1| GK23167 [Drosophila willistoni]
Length = 1008
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 6/208 (2%)
Query: 37 NESKV-GLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
NES V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L +LE ++++
Sbjct: 552 NESIVISLDCEGINLGLKGEITLIEIGTGRGEAFLFDVQSCPAMVSDGGLKTLLEHEQVI 611
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KVIH DA L F I L+NV+DTQ A LQ + Q I LN L + Y
Sbjct: 612 KVIHDCRNDAANLYLQFGILLRNVFDTQAAHAILQYQENG--KQVYKAKYISLNSLCEQY 669
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQN 213
N K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +N
Sbjct: 670 NAPCNPIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PEN 728
Query: 214 RLLLDNLIYETLFNHVVPLNIRKRRQFR 241
R LL L E + + P ++ R++ R
Sbjct: 729 RQLLSELCTEQILMQIKPNEVKIRKKQR 756
>gi|383858820|ref|XP_003704897.1| PREDICTED: uncharacterized protein LOC100875978 [Megachile
rotundata]
Length = 823
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I + +E+ + I+N K + D EG++LGV G+++LV + +G
Sbjct: 380 VLQQTRVIVNPRESLQIIEDIINPRKPPPDGKIVIAFDCEGINLGVKGQLTLVQIGTMSG 439
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ ++FD+++CP ++ G L ++LE + ++KVIH D+ L F I L NV+DTQ A
Sbjct: 440 QAYVFDLFTCPNLVQAGGLQKLLEHNDVIKVIHDCRNDSVNLYRQFKIMLNNVFDTQAAH 499
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
LQ + + + LN L Y N K+ ++N+YR N W RPLT DM
Sbjct: 500 AVLQFQETGKPVYKV--KNVNLNTLCDHYGAPYNPLKEQLKNIYRNNQRYWCRRPLTRDM 557
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
L+YA++DV SL+ + + + + L + L E + H+ P +R R++ R+
Sbjct: 558 LIYASSDVLSLVPQIYNSMSKLIKPEVQALFNELCEEQIQMHIKPTEVRARKKQRK 613
>gi|2460293|gb|AAB71892.1| Pur-alpha [Drosophila melanogaster]
Length = 274
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH- 369
TKM Q +K+FY D+KQ++ ++FIK++E+ D RN I S + RDHL++ +
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRSRFIKVAEIGADGRRNPILGSFTAA-EFRDHLSSFSDYYA 104
Query: 370 ----QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAF 425
QNT + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA
Sbjct: 105 SLSPQNT--DNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIAL 162
Query: 426 PAQDLGPIIGLISDLQQEHSCPEDEDGA------PEGNYMRCNNKRFFFNVSKNGKGTFM 479
PAQ + ++DL +E DG PE +M+ +NK F+F++ +N +G +M
Sbjct: 163 PAQGMIEFRDALTDLLEEFGA---NDGGRFKGDLPEERHMKVDNKNFYFDIGQNNRGVYM 219
Query: 480 RISEI 484
RISE+
Sbjct: 220 RISEV 224
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVGGKLSSI--AFPAQDLGPIIGLISDLQQEHSCPED 449
++R++LD+K N R+RF+ ++++ G+ + I +F A + + SD S P++
Sbjct: 53 SKRFYLDVKQNRRSRFIKVAEI-GADGRRNPILGSFTAAEFRDHLSSFSDYYASLS-PQN 110
Query: 450 EDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGI 496
D PE ++ + +R++ ++ +N +G F+R+S+ T + I +
Sbjct: 111 TDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIAL 162
>gi|195401414|ref|XP_002059308.1| GJ18283 [Drosophila virilis]
gi|194142314|gb|EDW58720.1| GJ18283 [Drosophila virilis]
Length = 1176
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 126/236 (53%), Gaps = 11/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK------VGLDLEGMDLGVDGKVSLVSLALQNGKI 68
++ T +I +V+ + +L+ +K + LD EG++LG+ G+++L+ + G+
Sbjct: 695 VLQNTTVIANVKHSTFVTEALLDLAKDESNIAISLDCEGINLGIKGEITLIEIGTARGEA 754
Query: 69 FIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA 128
F+FDV SCP ++ DG L +LE D+++KVIH DA L F I L+NV+DTQ A
Sbjct: 755 FLFDVQSCPAMVSDGGLKTLLEHDQVIKVIHDCRNDAVNLYLQFGILLRNVFDTQAAHAI 814
Query: 129 LQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLL 188
LQ + Q I LN L + Y N K ++ +YR + W RPLT +M+L
Sbjct: 815 LQYQENG--KQVYKAKYISLNSLCEQYNAPCNPIKDQLKQIYRRDQKFWAKRPLTREMML 872
Query: 189 YAAADVESLL--ALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
YAA DV L+ LF + ++ +NR L L E + + P ++ R++ R+
Sbjct: 873 YAAGDVLVLIHDQLFGSLAQQIK-PENRQLFSELCTEQILMQIKPNEVKIRKKQRK 927
>gi|242008039|ref|XP_002424820.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508370|gb|EEB12082.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 843
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 136/237 (57%), Gaps = 14/237 (5%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESKVG------LDLEGMDLGVDGKVSLVSLALQNGKI 68
+M+ T +I ++E+ + IL+++K G +D EG++LG GK++L+ + NG +
Sbjct: 369 IMSVTKVINTIKESNQIIDDILSKAKEGSEVVVSVDCEGINLGSKGKLTLIQIGTMNGNV 428
Query: 69 FIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA 128
++FD+ +C + G L +L SD+++KVIH D+ + F + L+NV+DT+ A
Sbjct: 429 YVFDLVTCSNLFEAGGLARLLTSDQVIKVIHDCRNDSSTIYFQFGVILRNVFDTKSAHAV 488
Query: 129 LQLSD---PRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSD 185
+Q+ + P +D + LN L + Y + N K+ +N+Y+++ IW RPL+ D
Sbjct: 489 IQMQEMGKPVHKVKD-----VSLNTLYEIYNLPTNPMKEYFKNIYKKDQKIWGRRPLSRD 543
Query: 186 MLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
M++YAAADV SL+ + + + + + LL+ L E ++ H+ P+ ++ R+ R+
Sbjct: 544 MIVYAAADVLSLVPHLYSLMLKIIKPEYKKLLEELCEEQIYVHIKPIEVKLRKNQRK 600
>gi|195154607|ref|XP_002018213.1| GL17589 [Drosophila persimilis]
gi|194114009|gb|EDW36052.1| GL17589 [Drosophila persimilis]
Length = 831
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE ++++KVIH
Sbjct: 568 VSLDCEGINLGLKGEITLIEIGTARGEAFLFDVQSCPAMVTDGGLKTVLEHEQVIKVIHD 627
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 628 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQENG--KQVYKAKYISLNSLCEQYNAPCN 685
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 686 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGSLARQIR-PENRQLFS 744
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 745 ELCTEQILLQIKPNEVKIRKKQR 767
>gi|198458527|ref|XP_002138553.1| GA24836 [Drosophila pseudoobscura pseudoobscura]
gi|198136373|gb|EDY69111.1| GA24836 [Drosophila pseudoobscura pseudoobscura]
Length = 830
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE ++++KVIH
Sbjct: 567 VSLDCEGINLGLKGEITLIEIGTARGEAFLFDVQSCPAMVTDGGLKTVLEHEQVIKVIHD 626
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 627 CRNDAANLYLQFGILLRNVFDTQAAHAILQYQENG--KQVYKAKYISLNSLCEQYNAPCN 684
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 685 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGSLARQIR-PENRQLFS 743
Query: 219 NLIYETLFNHVVPLNIRKRRQFR 241
L E + + P ++ R++ R
Sbjct: 744 ELCTEQILLQIKPNEVKIRKKQR 766
>gi|328780055|ref|XP_623215.2| PREDICTED: hypothetical protein LOC550822 isoform 1 [Apis
mellifera]
Length = 664
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 126/236 (53%), Gaps = 10/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I + +E+ + I+N K V D EG++LGV G+++LV + +G
Sbjct: 218 VLQQTRVIVNPRESLQIIEDIINPRKPPSDGKIVVSFDCEGINLGVKGQLTLVQIGTMSG 277
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ ++FD+++CP ++ G L ++LE ++KVIH D+ L F I L NV+DTQ A
Sbjct: 278 QAYVFDLFACPNLVQAGGLQKLLEHKDVIKVIHDCRNDSVNLYRQFKIMLNNVFDTQAAH 337
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
LQ + + + LN L Y N K+ ++N+YR N W RPLT DM
Sbjct: 338 AVLQFQETGKPVYKV--KNVNLNTLCDHYGAPSNPLKEQLKNIYRNNQRYWCRRPLTRDM 395
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
L+YA++DV SL+ + + ++L + L E + H+ P ++ R++ R+
Sbjct: 396 LIYASSDVLSLVPQIYISMSRLIKPEVQVLFNELCEEQIQLHIKPAEVKARKKQRK 451
>gi|195119318|ref|XP_002004178.1| GI19770 [Drosophila mojavensis]
gi|193909246|gb|EDW08113.1| GI19770 [Drosophila mojavensis]
Length = 991
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 5/204 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+ LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L +LE D+++KVIH
Sbjct: 540 ISLDCEGINLGIKGEITLIEIGTARGEAFLFDVQSCPAMVSDGGLKTLLEHDQVIKVIHD 599
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
DA L F I L+NV+DTQ A LQ + Q I LN L + Y N
Sbjct: 600 CRNDAVNLYLQFGILLRNVFDTQAAHAILQYQENG--KQVYKAKYISLNSLCEQYNAPCN 657
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQNRLLLD 218
K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +NR L
Sbjct: 658 PIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHEQLFGTLAQQIK-PENRQLFS 716
Query: 219 NLIYETLFNHVVPLNIRKRRQFRQ 242
L E + + P ++ R++ R+
Sbjct: 717 ELCTEQILMQIKPNEVKIRKKQRK 740
>gi|380014058|ref|XP_003691060.1| PREDICTED: uncharacterized protein LOC100862929 [Apis florea]
Length = 825
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 126/236 (53%), Gaps = 10/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I + +E+ + I+N K V D EG++LGV G+++LV + +G
Sbjct: 379 VLQQTRVIVNPRESLQIIEDIINPRKPSPDGKIVVSFDCEGINLGVKGQLTLVQIGTMSG 438
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ ++FD+++CP ++ G L ++LE ++KVIH D+ L F I L NV+DTQ A
Sbjct: 439 QAYVFDLFACPNLVQAGGLQKLLEHKDVIKVIHDCRNDSVNLYRQFKIMLNNVFDTQAAH 498
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
LQ + + + LN L Y N K+ ++N+YR N W RPLT DM
Sbjct: 499 AVLQFQETGKPVYKV--KNVNLNTLCDHYGAPSNPLKEQLKNIYRNNQRYWCRRPLTRDM 556
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
L+YA++DV SL+ + + ++L + L E + H+ P ++ R++ R+
Sbjct: 557 LIYASSDVLSLVPQIYISMSRLIKPEVQVLFNELCEEQIQLHIKPAEVKARKKQRK 612
>gi|391345825|ref|XP_003747183.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Metaseiulus occidentalis]
Length = 325
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 15/188 (7%)
Query: 309 IDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--L 366
+ TKM Q +K+FY D+KQ++ +FIK++EV + ++++ ++MS RDHL L
Sbjct: 44 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGVAGRKSRLLLAMSTAAEFRDHLTHFSEL 103
Query: 367 TAHQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPV----GGKLS 421
A P H + +KSEV+IKD RRY+LDLK+N R RF+ +SQ + G +
Sbjct: 104 YAKLGPPHPHNAPEDGKLKSEVIIKDNRRYYLDLKENSRGRFLRVSQTIATMAMRTGPRT 163
Query: 422 SIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKG 476
IA PAQ L ++DL E+ +DG PEG +MR +K F+F++ +N +G
Sbjct: 164 QIAIPAQGLIEFRDCLTDLLIEYGT---DDGGFKGELPEGRHMRIEDKIFYFDIGQNSRG 220
Query: 477 TFMRISEI 484
+MR+SE+
Sbjct: 221 IYMRVSEV 228
>gi|443720888|gb|ELU10440.1| hypothetical protein CAPTEDRAFT_179772 [Capitella teleta]
Length = 257
Score = 130 bits (327), Expect = 3e-27, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 118/214 (55%), Gaps = 12/214 (5%)
Query: 297 EKESANEERI------EVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHI 350
++ES +E+ + + + TK Q +K+FY D+KQ++ +FIKI+EV ++++ +
Sbjct: 3 DRESGDEQLMAQGSQEQELATKTLQIQSKRFYLDVKQNRRGRFIKIAEVGAGGKKSRLLL 62
Query: 351 SMSVVGHLRDHLNALLTAHQN---TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARF 407
+MS RDHL + + + + +KSE ++KD RRY+LDLK+N R RF
Sbjct: 63 AMSTAAEFRDHLTDFSDHYASLGPPSQESVPEDGKLKSESMVKDNRRYYLDLKENQRGRF 122
Query: 408 VTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC---PEDEDGAPEGNYMRCNNK 464
+ +SQ+ P S IA PAQ + ++DL +E E + PE MR +K
Sbjct: 123 LRVSQIFPRSVNRSQIAIPAQGMIEFRDALTDLLEEFGTDDHAESQGELPEPKSMRVEHK 182
Query: 465 RFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
F+F+V +N +GTFMRISE+ T + I +S
Sbjct: 183 MFYFDVGQNRRGTFMRISEVRTNFRTAITIPERS 216
>gi|350401760|ref|XP_003486252.1| PREDICTED: hypothetical protein LOC100742773 [Bombus impatiens]
Length = 826
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 125/236 (52%), Gaps = 10/236 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I + +E+ + I+N K V D EG++LGV G+++LV + +G
Sbjct: 380 ILQQTKIIVNPRESLQIIEDIINPRKPPPNGKIVVSFDCEGINLGVKGQLTLVQIGTMSG 439
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ ++FD+++CP ++ G L ++LE ++KVIH D+ L F I L NV+DTQ A
Sbjct: 440 QAYVFDLFACPNLVQAGGLQKLLEHKDVIKVIHDCRNDSVNLYRQFKIMLNNVFDTQAAH 499
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
LQ + + + LN L Y N K+ ++N+YR N W RPLT DM
Sbjct: 500 AVLQFQETGKPVYKV--KNVNLNTLCDHYGAPSNPLKEQLKNIYRNNQRYWCRRPLTRDM 557
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
L+YA++DV SL+ + + + L + L E + H+ P ++ R++ R+
Sbjct: 558 LIYASSDVLSLVPQIYVSMSRLIKPEVQGLFNELCEEQIQLHIKPAEVKTRKKQRK 613
>gi|332021038|gb|EGI61427.1| Exonuclease 3'-5' domain-containing protein 1 [Acromyrmex
echinatior]
Length = 832
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 130/237 (54%), Gaps = 12/237 (5%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I ++E+ I+N K V D EG++LGV G+++LV + +G
Sbjct: 384 VLQQTKVIATLRESLQVTEDIINPRKPPSDGKVVVSFDCEGINLGVRGQLTLVQIGTMSG 443
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ ++FD+ +CP ++ G L ++LE + KVIH D+ L + FNI L NV+DTQ A
Sbjct: 444 QAYVFDLVTCPGLVQAGGLQKLLEHPHVTKVIHDCRNDSVNLYNQFNITLTNVFDTQAAH 503
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
LQ D + + LN L Y N K+ ++N+YR++ W RP+T +M
Sbjct: 504 AVLQFQDTGKPVYKV--KNVNLNTLCDHYNAPCNPLKEQLKNIYRKDQRYWSRRPITREM 561
Query: 187 LLYAAADVESLLA-LFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
L+YA++DV SL+ +++ M++ +Q L + L E + H+ P ++ R++ R+
Sbjct: 562 LIYASSDVLSLVPQVYNAMSRLIKPEQESLFAE-LCEEQIQMHIRPAIVKARKKQRK 617
>gi|218749845|ref|NP_001136335.1| egalitarian [Nasonia vitripennis]
Length = 829
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 115/206 (55%), Gaps = 2/206 (0%)
Query: 37 NESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILK 96
+S V D EG+++G G+++L+ + +G I+IFD+ +CP I+ G L ++LES+ ++K
Sbjct: 408 GKSVVSFDCEGINVGPKGRLTLLQIGTMSGLIYIFDLITCPNILQAGGLQKLLESENVIK 467
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
VIH D+ L F I L N++DTQ A + ++ + + LN L Y
Sbjct: 468 VIHDCKNDSANLFHQFGITLVNIFDTQAAHSVIEYQNTGKPVYKV--KNANLNTLCDLYG 525
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLL 216
N K+ ++N+YR + W RPLT DM++YA++DV+SL+ L + + + + L
Sbjct: 526 APSNVLKEQLKNIYRRDQRYWARRPLTRDMIVYASSDVQSLVPLIYNAMSKLIKPEMQKL 585
Query: 217 LDNLIYETLFNHVVPLNIRKRRQFRQ 242
+ L E + H+ P ++ R++ R+
Sbjct: 586 FNELCEEQILMHINPNEVKVRKKQRK 611
>gi|405974727|gb|EKC39351.1| Transcriptional activator protein Pur-alpha [Crassostrea gigas]
Length = 246
Score = 126 bits (316), Expect = 6e-26, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 118/213 (55%), Gaps = 12/213 (5%)
Query: 297 EKESANEER-----IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHIS 351
++ES +E++ + + T+ Q +K+FY D+KQ++ +FIKI+EV ++++ ++
Sbjct: 3 DRESGDEQQGQGSGEQELATRTLQIQSKRFYLDVKQNRRGRFIKIAEVGAGGKKSRLLLA 62
Query: 352 MSVVGHLRDHLNALLTAHQN----TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARF 407
MS RD+L + + P + D +KSE ++K+ RRY+LDLK+N R RF
Sbjct: 63 MSTAAEFRDYLTEFSEHYASLGPPNPDNLPEDG-KLKSEQMVKENRRYYLDLKENQRGRF 121
Query: 408 VTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCP--EDEDGAPEGNYMRCNNKR 465
+ ++Q P GG S IA PAQ + ++DL E E ++ PE Y+R NK
Sbjct: 122 LRVAQTRPRGGPRSQIAIPAQGMIEFRDALTDLLDEFGTDDHEGQNELPESKYLRVENKV 181
Query: 466 FFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
F+F+V N +G ++RISE+ + I +S
Sbjct: 182 FYFDVGSNRRGVYLRISEVRANYRTAVTIPERS 214
>gi|225712532|gb|ACO12112.1| Transcriptional activator protein Pur-alpha [Lepeophtheirus
salmonis]
Length = 286
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 7/191 (3%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL---NALLT 367
+KM Q +K+FY D+K ++ KFIKI+E+ D R+QI +++S RD+L T
Sbjct: 54 SKMIQIQSKRFYLDVKLNQRGKFIKIAEIGTDGRRSQIFLALSTAADFRDNLYKFGEFYT 113
Query: 368 AHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
+ +KSE+++KD RRY+LDLK+N R R++ +SQ + GG S IA PA
Sbjct: 114 KLGPPNPEVLPENGKLKSEMMVKDNRRYYLDLKENARGRYLRVSQTISRGGHRSQIAIPA 173
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTP 487
Q + ++DL + E +G+++R +NK F+F++ +N +GT+M+ISE+ +
Sbjct: 174 QGMVEFRDALTDLVDQFG----ESDLTDGHHLRVDNKNFYFDIGQNNRGTYMKISEVKSN 229
Query: 488 SKVLTNIGIKS 498
S+ I KS
Sbjct: 230 SQTSITIPEKS 240
>gi|307198047|gb|EFN79100.1| Exonuclease 3'-5' domain-like-containing protein 1 [Harpegnathos
saltator]
Length = 831
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 111/202 (54%), Gaps = 2/202 (0%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+ D EG++LGV G+++LV + +G+ ++FD+++CP ++ G L ++LE ++KVIH
Sbjct: 421 ISFDCEGINLGVKGQLTLVQIGTMSGQAYVFDLFTCPSLVQAGGLQKLLEHKNVVKVIHD 480
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L + F I L NV+DTQ A LQ + + + LN L Y N
Sbjct: 481 CRNDSVNLYNQFKIMLTNVFDTQAAHAVLQFQETGKPVYKV--KNVNLNTLCDHYGAPCN 538
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNL 220
K+ ++N+YR++ W RP+T DML+YA++DV SL+ + + + L L
Sbjct: 539 PLKEQLKNIYRKDQRYWSRRPMTRDMLIYASSDVLSLVPQVYNAMSRLIKPEIQGLFAEL 598
Query: 221 IYETLFNHVVPLNIRKRRQFRQ 242
E + H+ P ++ R++ R+
Sbjct: 599 CEEQIQMHIRPAEVKARKKQRK 620
>gi|321470528|gb|EFX81504.1| hypothetical protein DAPPUDRAFT_303477 [Daphnia pulex]
Length = 812
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 130/234 (55%), Gaps = 4/234 (1%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESKV-GLDLEGMDLGVD-GKVSLVSLALQNGKIFIFD 72
++ T +I+ +E+ + I++ KV LDLEG+++G + G+V+L + L +G I+IFD
Sbjct: 337 VLQSTRVISSTKESIIVVNDIMSSQKVVSLDLEGVNVGGNNGEVTLAVIGLPSGVIYIFD 396
Query: 73 VYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS 132
+ +CP IM G L ++ S I+KV H D+ L +N++L+NV+DTQ A +QL
Sbjct: 397 LITCPAIMSQGMLANLIISKEIVKVCHDCKNDSAALNLGWNVKLENVFDTQAAHAVVQLQ 456
Query: 133 DPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAA 192
+ + T LN + + Y + N FK+ ++ +Y+ + W RPLT DM+LYAA
Sbjct: 457 ETGRAVHKV--KTTSLNAMCENYDLPTNPFKELVKTIYKRDQRFWARRPLTRDMILYAAY 514
Query: 193 DVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLR 246
DV L+ + + + R LL+ L E L + P +++ ++ R+ ++
Sbjct: 515 DVMPLVPHLYDLLNNTVKPEFRPLLEELCAENLLALLQPDEVKRSKKERKMEME 568
>gi|291387447|ref|XP_002710162.1| PREDICTED: purine-rich element binding protein A-like [Oryctolagus
cuniculus]
Length = 438
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 186 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 245
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 246 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 299
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 300 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 359
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 360 MRVSEVKPTYRNSITVPYKVWAKFG 384
>gi|68372225|ref|XP_685395.1| PREDICTED: transcriptional activator protein Pur-alpha-like [Danio
rerio]
Length = 279
Score = 122 bits (306), Expect = 9e-25, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 295 HKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
H S + E + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV
Sbjct: 23 HPGAASRLQHDTEELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSV 82
Query: 355 VGHLRDHLNALLTAH-----------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNG 403
RD+L + + Q+ PR +KSE L+++ R+Y++DLK+N
Sbjct: 83 AVEFRDYLGDFIEHYAQLGPSNPDLVQDEPRR------ALKSEFLVRENRKYYMDLKENQ 136
Query: 404 RARFVTISQLLPVGGKL-----SSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNY 458
R RF+ I Q + G L +IA PAQ L ++ L + ED PEG
Sbjct: 137 RGRFLRIRQTVNRGPGLGTSQGQTIALPAQGLIEFRDALAKLIDDFGVDEDPAELPEGTS 196
Query: 459 MRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
+ +NKRFFF+V N G FMR+SE I+ P KV + G
Sbjct: 197 LTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPCKVWSKFG 241
>gi|225706094|gb|ACO08893.1| Transcriptional activator protein Pur-alpha [Osmerus mordax]
Length = 280
Score = 122 bits (305), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 30/213 (14%)
Query: 307 EVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALL 366
E + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L +
Sbjct: 36 EELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFI 95
Query: 367 TAH-----------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLP 415
+ Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 96 EHYAQLGPSNPDIVQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVN 149
Query: 416 VGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNV 470
G L S IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V
Sbjct: 150 RGPGLGSAQGQTIALPAQGLIEFRDALAKLIDDYGVDEEPAELPEGTSLTVDNKRFFFDV 209
Query: 471 SKNGKGTFMRISE--------ISTPSKVLTNIG 495
N G FMR+SE I+ P KV + G
Sbjct: 210 GSNKYGVFMRVSEVKPTYRNSITVPCKVWSKFG 242
Score = 41.6 bits (96), Expect = 1.9, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 379 DTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD-LGP 432
DT + S+ + +R++LD+K N + RF+ I+++ G K LS S+A +D LG
Sbjct: 34 DTEELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGD 93
Query: 433 IIGLISDLQQEHS--CPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
I + L + ++ A + ++ N++++ ++ +N +G F+RI +
Sbjct: 94 FIEHYAQLGPSNPDIVQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQ 146
>gi|115720241|ref|XP_784262.2| PREDICTED: transcriptional activator protein Pur-alpha-like
[Strongylocentrotus purpuratus]
Length = 259
Score = 122 bits (305), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHL 358
+ +E ++ + TK +K++Y D+KQ++ +F+KI+EV ++++ + MS
Sbjct: 22 QEGDETGVQELATKTLHIQSKRYYLDVKQNRRGRFLKIAEVGGRGGKSRLTLGMSAAAEF 81
Query: 359 RDHLNALL--------TAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
R+HL H N P D +KSEV++K+ RRY+LDLK+N R RF+ +
Sbjct: 82 RNHLTDFSEHYAQLGPANHDNPP-----DDGRLKSEVIVKENRRYYLDLKENSRGRFLKV 136
Query: 411 SQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDG---APEGNYMRCNNKRFF 467
SQ + G + + IA PAQ L +++L E E+G PE R NK F+
Sbjct: 137 SQTVNRGPR-TQIAVPAQGLVEFKNALTELLDEFGTDTAEEGQGNVPESKSFRVENKNFY 195
Query: 468 FNVSKNGKGTFMRISEISTPSKVLTNIGI 496
F++ +N +G +MR+SE+ ++ T++ I
Sbjct: 196 FDIGQNFRGVYMRVSEVQPRNQFRTSVTI 224
>gi|119582480|gb|EAW62076.1| hCG45299 [Homo sapiens]
Length = 399
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 147 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 206
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 207 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 260
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 261 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 320
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 321 MRVSEVKPTYRNSITVPYKVWAKFG 345
>gi|297295219|ref|XP_001085737.2| PREDICTED: transcriptional activator protein Pur-alpha-like isoform
2 [Macaca mulatta]
Length = 399
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 147 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 206
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 207 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 260
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 261 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 320
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 321 MRVSEVKPTYRNSITVPYKVWAKFG 345
>gi|392354626|ref|XP_003751810.1| PREDICTED: transcriptional activator protein Pur-alpha isoform 1
[Rattus norvegicus]
Length = 303
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 51 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 110
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 111 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 164
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 165 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 224
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 225 MRVSEVKPTYRNSITVPYKVWAKFG 249
>gi|392334109|ref|XP_001063244.3| PREDICTED: transcriptional activator protein Pur-alpha [Rattus
norvegicus]
gi|392354628|ref|XP_003751811.1| PREDICTED: transcriptional activator protein Pur-alpha isoform 2
[Rattus norvegicus]
Length = 295
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 43 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 102
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 103 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 156
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 157 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 216
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 217 MRVSEVKPTYRNSITVPYKVWAKFG 241
>gi|426350285|ref|XP_004042710.1| PREDICTED: transcriptional activator protein Pur-alpha, partial
[Gorilla gorilla gorilla]
Length = 284
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 32 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 91
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 92 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 145
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 146 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 205
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 206 MRVSEVKPTYRNSITVPYKVWAKFG 230
>gi|84569943|gb|AAI10575.1| PURA protein [Homo sapiens]
Length = 285
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 33 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 92
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 93 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 146
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 147 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 206
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 207 MRVSEVKPTYRNSITVPYKVWAKFG 231
>gi|62089471|gb|AAH36087.1| Purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 70 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 129
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 130 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 183
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 184 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 243
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 244 MRVSEVKPTYRNSITVPYKVWAKFG 268
>gi|395817462|ref|XP_003782189.1| PREDICTED: transcriptional activator protein Pur-alpha [Otolemur
garnettii]
Length = 323
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 71 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 130
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 131 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 184
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 185 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 244
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 245 MRVSEVKPTYRNSITVPYKVWAKFG 269
>gi|329664204|ref|NP_001192363.1| transcriptional activator protein Pur-alpha [Bos taurus]
gi|296485236|tpg|DAA27351.1| TPA: purine-rich element binding protein A-like [Bos taurus]
Length = 322
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 70 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 129
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 130 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 183
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 184 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 243
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 244 MRVSEVKPTYRNSITVPYKVWAKFG 268
>gi|5032007|ref|NP_005850.1| transcriptional activator protein Pur-alpha [Homo sapiens]
gi|55624954|ref|XP_527027.1| PREDICTED: transcriptional activator protein Pur-alpha isoform 3
[Pan troglodytes]
gi|335283572|ref|XP_003354344.1| PREDICTED: transcriptional activator protein Pur-alpha isoform 1
[Sus scrofa]
gi|335283574|ref|XP_003354345.1| PREDICTED: transcriptional activator protein Pur-alpha isoform 2
[Sus scrofa]
gi|345794034|ref|XP_003433838.1| PREDICTED: transcriptional activator protein Pur-alpha [Canis lupus
familiaris]
gi|395736246|ref|XP_002816001.2| PREDICTED: transcriptional activator protein Pur-alpha isoform 1
[Pongo abelii]
gi|402872702|ref|XP_003900244.1| PREDICTED: transcriptional activator protein Pur-alpha [Papio
anubis]
gi|1346918|sp|Q00577.2|PURA_HUMAN RecName: Full=Transcriptional activator protein Pur-alpha; AltName:
Full=Purine-rich single-stranded DNA-binding protein
alpha
gi|190750|gb|AAA60229.1| Pur [Homo sapiens]
gi|208968707|dbj|BAG74192.1| purine-rich element binding protein A [synthetic construct]
Length = 322
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 70 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 129
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 130 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 183
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 184 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 243
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 244 MRVSEVKPTYRNSITVPYKVWAKFG 268
>gi|6679573|ref|NP_033015.1| transcriptional activator protein Pur-alpha [Mus musculus]
gi|1172773|sp|P42669.1|PURA_MOUSE RecName: Full=Transcriptional activator protein Pur-alpha; AltName:
Full=Purine-rich single-stranded DNA-binding protein
alpha
gi|404650|gb|AAA64630.1| Pur-alpha [Mus musculus]
gi|2460121|gb|AAB71860.1| purine-rich single-stranded DNA-binding protein alpha [Mus
musculus]
gi|148664740|gb|EDK97156.1| mCG121964 [Mus musculus]
gi|162318398|gb|AAI57019.1| Purine rich element binding protein A [synthetic construct]
gi|162319088|gb|AAI56182.1| Purine rich element binding protein A [synthetic construct]
Length = 321
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 69 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 128
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 129 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 182
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 183 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 242
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 243 MRVSEVKPTYRNSITVPYKVWAKFG 267
>gi|410913405|ref|XP_003970179.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Takifugu rubripes]
Length = 277
Score = 120 bits (301), Expect = 3e-24, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 39/230 (16%)
Query: 290 INRMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIH 349
++R+ H +E A++ R+++ NK+FY D+KQ+ +F+KI+EV ++++
Sbjct: 28 MSRLQHDTEELASK-RVDIQ--------NKRFYIDVKQNVKGRFLKIAEVGAGGNKSRLT 78
Query: 350 ISMSVVGHLRDHLNALLTAH-----------QNTPRHRYRDTHTIKSEVLIKDTRRYFLD 398
+SMSV RD+L + + Q+ PR +KSE L+++ R+Y++D
Sbjct: 79 LSMSVAVEFRDYLGDFIEHYAQLGPTNPDIVQDEPRR------ALKSEFLVRENRKYYMD 132
Query: 399 LKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA 453
LK+N R RF+ I Q + G L S IA PAQ L ++ L ++ E+
Sbjct: 133 LKENQRGRFLRIRQTVNRGPGLGSAQGQTIALPAQGLIEFRDALAKLIDDYGVDEEPAEL 192
Query: 454 PEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
PEG +NKRFFF+V N G FMR+SE I+ P KV + G
Sbjct: 193 PEGTSFTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPCKVWSRFG 242
>gi|391343177|ref|XP_003745889.1| PREDICTED: uncharacterized protein LOC100902998 [Metaseiulus
occidentalis]
Length = 842
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 21/246 (8%)
Query: 8 QNNLLRTLMNRTNLITDVQEAQSAMATILNE--SKVGLDLEGMDLGVDGKVSLVSLALQN 65
Q L+ ++ +I +E + + ILN+ V +D EG++LG+ G ++L+ +A
Sbjct: 337 QQKCLQEMLRNVRIIAKPKECATLVNNILNKQFDVVAVDAEGVNLGIKGPMTLLQIATPE 396
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
+++IFD+ S P ++ +GKL E+LES+++LKV+H D+ L F I LKNV+DTQ A
Sbjct: 397 KQVYIFDLLSNPALLVEGKLKEILESEKLLKVMHDCRNDSAALYHQFGITLKNVFDTQAA 456
Query: 126 FTALQLSDPRLLSQDLVPHT--------IGLNDLLKFYKISPNNFKKNIQNLYRENPHIW 177
LQ D H I L L + Y N + ++ LYR + W
Sbjct: 457 HAVLQQQD----------HAKPVYKVKNISLATLCEMYGGPLNPRRDQMKALYRRDQKFW 506
Query: 178 KTRPLTSDMLLYAAADVESLLALFHRMTKEYALK-QNRLLLDNLIYETLFNHVVPLNIRK 236
RPLT DM+ +AA DV L A A++ ++ L+++L E + +++ P ++
Sbjct: 507 SRRPLTDDMIFHAAFDVICLSAPSVVENLRSAIREESNNLMEDLCQEQIHSYIQPDEVKL 566
Query: 237 RRQFRQ 242
+++ R+
Sbjct: 567 KKKQRK 572
>gi|332234630|ref|XP_003266508.1| PREDICTED: transcriptional activator protein Pur-alpha [Nomascus
leucogenys]
Length = 322
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 70 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 129
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 130 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 183
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 184 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 243
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 244 MRVSEVKPTYRNSITVPYKVWAKFG 268
>gi|126290405|ref|XP_001368517.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Monodelphis domestica]
Length = 314
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 62 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 121
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 122 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 175
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 176 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 235
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 236 MRVSEVKPTYRNSITVPYKVWAKFG 260
>gi|54695646|gb|AAV38195.1| purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 70 NKRFYLDVKQNAKGRFLKIAEVGAGGDKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 129
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 130 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 183
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 184 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 243
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 244 MRVSEVKPTYRNSITVPYKVWAKFG 268
>gi|260836073|ref|XP_002613031.1| hypothetical protein BRAFLDRAFT_225672 [Branchiostoma floridae]
gi|229298414|gb|EEN69040.1| hypothetical protein BRAFLDRAFT_225672 [Branchiostoma floridae]
Length = 227
Score = 120 bits (300), Expect = 4e-24, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 112/200 (56%), Gaps = 14/200 (7%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLN------- 363
TK +K+FY D+KQ++ +F+KI+EV ++++ +SMS RDHL
Sbjct: 5 TKTLHIQSKRFYLDVKQNRRGRFLKIAEVGAGGNKSRLTLSMSTAAEFRDHLTDFSEHYA 64
Query: 364 ALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSI 423
L A+ + P R +KSE ++K+ RRY+LDLK+N R RF+ +SQ + G + + I
Sbjct: 65 QLGPANPDNPPEDGR----LKSETMVKENRRYYLDLKENARGRFLRVSQTVNRGPR-TQI 119
Query: 424 AFPAQDLGPIIGLISDLQQEHSCPE--DEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
A PAQ L +++L E + ++ PEG +MR NK F+F++ N +G +MRI
Sbjct: 120 ALPAQGLVEFRDALTELLDEFGTDDMSEQPELPEGRHMRVENKNFYFDIGSNNRGVYMRI 179
Query: 482 SEISTPSKVLTNIGIKSNIK 501
SE+ + + I KS ++
Sbjct: 180 SEVKSTFRTSITIPEKSWVR 199
Score = 47.8 bits (112), Expect = 0.025, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQ 442
+ ++ L ++R++LD+K N R RF+ I++ + GG S + ++D +
Sbjct: 3 LATKTLHIQSKRFYLDVKQNRRGRFLKIAE-VGAGGNKSRLTLSMSTAAEFRDHLTDFSE 61
Query: 443 EHS--CPEDEDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISE 483
++ P + D PE ++ N+R++ ++ +N +G F+R+S+
Sbjct: 62 HYAQLGPANPDNPPEDGRLKSETMVKENRRYYLDLKENARGRFLRVSQ 109
>gi|348528669|ref|XP_003451839.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Oreochromis niloticus]
Length = 281
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 126/250 (50%), Gaps = 43/250 (17%)
Query: 274 NDYNVPLANAKLLN----NPINRMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSK 329
+D+ P A L ++R+ H +E A++ R+++ NK+FY D+KQ+
Sbjct: 8 SDHGGPTAGPGSLPPGAMGAMSRLQHDTEELASK-RVDIQ--------NKRFYLDVKQNV 58
Query: 330 STKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-----------QNTPRHRYR 378
+F+KI+EV ++++ +SMSV RD+L + + Q+ PR
Sbjct: 59 KGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPTNPDMVQDEPRR--- 115
Query: 379 DTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPI 433
+KSE L+++ R+Y++DLK+N R RF+ I Q + G L S IA PAQ L
Sbjct: 116 ---ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSAQGQTIALPAQGLIEF 172
Query: 434 IGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------IS 485
++ L ++ E+ PEG + +NKRFFF+V N G FMR+SE I+
Sbjct: 173 RDALAKLIDDYGVDEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSIT 232
Query: 486 TPSKVLTNIG 495
P KV + G
Sbjct: 233 VPCKVWSKFG 242
>gi|355714569|gb|AES05047.1| purine-rich element binding protein A [Mustela putorius furo]
Length = 269
Score = 119 bits (299), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 22 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 81
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 82 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 135
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 136 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 195
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 196 MRVSEVKPTYRNSITVPYKVWAKFG 220
>gi|432880231|ref|XP_004073615.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Oryzias latipes]
Length = 281
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 126/250 (50%), Gaps = 43/250 (17%)
Query: 274 NDYNVPLANAKLLN----NPINRMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSK 329
+D+ P A L ++R+ H +E A++ RI++ NK+FY D+KQ+
Sbjct: 8 SDHGGPTAGPGSLPPSAMGAMSRLQHDTEELASK-RIDIQ--------NKRFYLDVKQNV 58
Query: 330 STKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-----------QNTPRHRYR 378
+F+KI+EV ++++ +SMSV RD+L + + Q+ PR
Sbjct: 59 KGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPTNPDMVQDEPRR--- 115
Query: 379 DTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPI 433
+KSE L+++ R+Y++DLK+N R RF+ I Q + G L S IA PAQ L
Sbjct: 116 ---ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSAQGQTIALPAQGLIEF 172
Query: 434 IGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------IS 485
++ L ++ E+ PEG + +NKRFFF+V N G FMR+SE I+
Sbjct: 173 RDALAKLIDDYGVDEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSIT 232
Query: 486 TPSKVLTNIG 495
P KV + G
Sbjct: 233 VPCKVWSKFG 242
>gi|84569968|gb|AAI10595.1| PURA protein [Homo sapiens]
Length = 300
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 49 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 108
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 109 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 162
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 163 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 222
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 223 MRVSEVKPTYRNSITVPYKVWAKFG 247
>gi|47212987|emb|CAF92718.1| unnamed protein product [Tetraodon nigroviridis]
Length = 265
Score = 119 bits (299), Expect = 6e-24, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 39/230 (16%)
Query: 290 INRMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIH 349
++R+ H +E A++ R+++ NK+FY D+KQ+ +F+KI+EV ++++
Sbjct: 28 MSRLQHDTEELASK-RVDIQ--------NKRFYIDVKQNVKGRFLKIAEVGAGGNKSRLT 78
Query: 350 ISMSVVGHLRDHLNALLTAH-----------QNTPRHRYRDTHTIKSEVLIKDTRRYFLD 398
+SMSV RD+L + + Q+ PR +KSE L+++ R+Y++D
Sbjct: 79 LSMSVAVEFRDYLGDFIEHYAQLGPSNPDVVQDEPRR------ALKSEFLVRENRKYYMD 132
Query: 399 LKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGA 453
LK+N R RF+ I Q + G L S IA PAQ L ++ L ++ E+
Sbjct: 133 LKENQRGRFLRIRQTVNRGPGLGSAQGQTIALPAQGLIEFRDALAKLIDDYGVDEEPAEL 192
Query: 454 PEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
PEG +NKRFFF+V N G FMR+SE I+ P KV + G
Sbjct: 193 PEGTSFTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPCKVWSRFG 242
>gi|47227175|emb|CAG00537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 18/196 (9%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-QNTPRH- 375
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + + Q P H
Sbjct: 51 NKRFYLDVKQNPKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPTHP 110
Query: 376 ---RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS-----IAFPA 427
+ +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S IA PA
Sbjct: 111 GLVQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPA 170
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE---- 483
Q L ++ L ++ ++ PEG+ + +NKRFFF+V N G FMR+SE
Sbjct: 171 QGLIEFRDALAKLIDDYGVEDEPAELPEGSSLTVDNKRFFFDVGSNKYGVFMRVSEVKPT 230
Query: 484 ----ISTPSKVLTNIG 495
I+ P KV + G
Sbjct: 231 YRNSITVPYKVWSKFG 246
>gi|427793085|gb|JAA61994.1| Putative egalitarian, partial [Rhipicephalus pulchellus]
Length = 759
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 130/246 (52%), Gaps = 8/246 (3%)
Query: 8 QNNLLRTLMNRTNLITDVQEAQSAMATILNESK-VGLDLEGMDLGVDGKVSLVSLALQNG 66
Q+ L ++ +IT V+E ++ ++ + ++ + V LD EG++LG G ++LV LA
Sbjct: 338 QDQTLGDMLRGVRVITKVKECEALVSRLSSQHQLVALDTEGVNLGPQGPLTLVQLATPAA 397
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
++F+FDV S P + +G L ++LE++ I KV+H D+ L F I+L+NV+DTQ A
Sbjct: 398 EVFLFDVQSAPQLFTEGHLRDILEAEHITKVMHDCRNDSAALFFQFGIKLQNVFDTQAAH 457
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
ALQ D + + L L Y N + +++LYR + W RPL+ DM
Sbjct: 458 AALQQQDVGKPVHKV--KNVSLGTLCTLYGGPANPRRDQVKSLYRRDQKFWSRRPLSEDM 515
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ---- 242
+ +AA DV LL + + ++ LL L E H+ P +++R++ R+
Sbjct: 516 IFHAAFDVFCLLPGVYGALQGALRPESEPLLWALCEEQALAHISPDEVKQRKKQRKLDHE 575
Query: 243 -NQLRR 247
+ LRR
Sbjct: 576 VDDLRR 581
>gi|410948447|ref|XP_003980951.1| PREDICTED: transcriptional activator protein Pur-alpha [Felis
catus]
Length = 333
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 81 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 140
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 141 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 194
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 195 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 254
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 255 MRVSEVKPTYRNSITVPYKVWAKFG 279
>gi|351704148|gb|EHB07067.1| Transcriptional activator protein Pur-alpha [Heterocephalus glaber]
Length = 344
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 93 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 152
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 153 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 206
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 207 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 266
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 267 MRVSEVKPTYRNSITVPYKVWAKFG 291
>gi|225718614|gb|ACO15153.1| Transcriptional activator protein Pur-alpha [Caligus clemensi]
Length = 266
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 120/213 (56%), Gaps = 24/213 (11%)
Query: 295 HKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
H EKE A +KM K+FY D+KQ++ KFIK++E+ ++ R++I +++S
Sbjct: 26 HFEKELA---------SKMIPIQGKRFYLDVKQNQRGKFIKVAEIGNERRRSEIFLALST 76
Query: 355 VGHLRDHL-------NALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARF 407
RDHL + L + + P D +KSE+++KD R+Y+LDLK+N R R+
Sbjct: 77 AVEFRDHLINFEDFYSKLAPTNADNPP----DNGKLKSEMMLKDNRKYYLDLKENMRGRY 132
Query: 408 VTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFF 467
+ +S GG+ S IA P Q + +++L +E ED PEG+++R ++K F+
Sbjct: 133 LRVSLTNSKGGRRSQIAIPVQGMVDFREALAELVEEFGV-ED---IPEGHHLRVDDKNFY 188
Query: 468 FNVSKNGKGTFMRISEISTPSKVLTNIGIKSNI 500
++ +N +G +M+ISE+ + ++ I KS I
Sbjct: 189 LDIGQNTRGVYMKISEVKSSAQASITIPEKSWI 221
>gi|395504638|ref|XP_003756654.1| PREDICTED: transcriptional activator protein Pur-alpha, partial
[Sarcophilus harrisii]
Length = 270
Score = 118 bits (296), Expect = 1e-23, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 18 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 77
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 78 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 131
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 132 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 191
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 192 MRVSEVKPTYRNSITVPYKVWAKFG 216
>gi|301753613|ref|XP_002912666.1| PREDICTED: transcriptional activator protein Pur-alpha-like,
partial [Ailuropoda melanoleuca]
gi|281345436|gb|EFB21020.1| hypothetical protein PANDA_000379 [Ailuropoda melanoleuca]
Length = 270
Score = 118 bits (296), Expect = 1e-23, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 18 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 77
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 78 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 131
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 132 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 191
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 192 MRVSEVKPTYRNSITVPYKVWAKFG 216
>gi|410915476|ref|XP_003971213.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Takifugu rubripes]
Length = 286
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 18/196 (9%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-QNTPRH- 375
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + + Q P H
Sbjct: 51 NKRFYLDVKQNPKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPTHP 110
Query: 376 ---RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS-----IAFPA 427
+ +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S IA PA
Sbjct: 111 GLVQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPA 170
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE---- 483
Q L ++ L ++ ++ PEG+ + +NKRFFF+V N G FMR+SE
Sbjct: 171 QGLIEFRDALAKLIDDYGVEDEPAELPEGSSLTVDNKRFFFDVGSNKYGVFMRVSEVKPT 230
Query: 484 ----ISTPSKVLTNIG 495
I+ P KV + G
Sbjct: 231 YRNSITVPYKVWSKFG 246
>gi|432897323|ref|XP_004076415.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Oryzias latipes]
Length = 285
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 30/202 (14%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + +
Sbjct: 51 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNP 110
Query: 370 ---QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS---- 422
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 111 GMIQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQ 164
Query: 423 -IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
IA PAQ L ++ L ++ ++ PEG+ + +NKRFFF+V N G FMR+
Sbjct: 165 TIALPAQGLIEFRDALAKLIDDYGVEDEPAELPEGSSLTVDNKRFFFDVGSNKYGVFMRV 224
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV + G
Sbjct: 225 SEVKPTYRNSITVPYKVWSKFG 246
>gi|166157876|ref|NP_001107341.1| purine-rich element binding protein A [Xenopus (Silurana)
tropicalis]
gi|163915973|gb|AAI57150.1| LOC100135162 protein [Xenopus (Silurana) tropicalis]
gi|213625709|gb|AAI71170.1| hypothetical protein LOC100135162 [Xenopus (Silurana) tropicalis]
gi|213625711|gb|AAI71172.1| hypothetical protein LOC100135162 [Xenopus (Silurana) tropicalis]
Length = 282
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 30/202 (14%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + +
Sbjct: 49 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNP 108
Query: 370 ---QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS---- 422
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 109 DMAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQ 162
Query: 423 -IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G FMR+
Sbjct: 163 TIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRV 222
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV G
Sbjct: 223 SEVKPTYRNSITVPYKVWGKFG 244
>gi|440902378|gb|ELR53175.1| Transcriptional activator protein Pur-alpha, partial [Bos grunniens
mutus]
Length = 264
Score = 117 bits (294), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 12 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 71
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 72 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 125
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 126 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 185
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 186 MRVSEVKPTYRNSITVPYKVWAKFG 210
>gi|380800373|gb|AFE72062.1| transcriptional activator protein Pur-alpha, partial [Macaca
mulatta]
Length = 277
Score = 117 bits (294), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 25 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 84
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 85 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 138
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 139 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 198
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 199 MRVSEVKPTYRNSITVPYKVWAKFG 223
>gi|148227760|ref|NP_001086909.1| purine-rich element binding protein A [Xenopus laevis]
gi|50603800|gb|AAH77738.1| Pura-prov protein [Xenopus laevis]
Length = 282
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 30/202 (14%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + +
Sbjct: 49 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNP 108
Query: 370 ---QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS---- 422
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 109 DVAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQ 162
Query: 423 -IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G FMR+
Sbjct: 163 TIALPAQGLIEFRDALAKLIDDYGVDEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRV 222
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV G
Sbjct: 223 SEVKPTYRNSITVPFKVWGKFG 244
>gi|49227661|ref|NP_001001846.1| purine-rich element binding protein A [Danio rerio]
gi|42411030|gb|AAS15050.1| Pur-alpha [Danio rerio]
gi|51858926|gb|AAH81472.1| Purine-rich element binding protein A [Danio rerio]
gi|156229843|gb|AAI51878.1| Purine-rich element binding protein A [Danio rerio]
gi|182890534|gb|AAI64647.1| Pura protein [Danio rerio]
Length = 287
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 30/202 (14%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + +
Sbjct: 51 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNP 110
Query: 370 ---QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS---- 422
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 111 DMPQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQ 164
Query: 423 -IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
IA PAQ L ++ L ++ ++ PEG + +NKRFFF+V N G FMR+
Sbjct: 165 TIALPAQGLIEFRDALAKLIDDYGVEDEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRV 224
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV + G
Sbjct: 225 SEVKPTYRNSITVPYKVWSKFG 246
>gi|348518714|ref|XP_003446876.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Oreochromis niloticus]
Length = 285
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 30/202 (14%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + +
Sbjct: 51 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNP 110
Query: 370 ---QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS----- 421
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L
Sbjct: 111 GMVQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGFTQGQ 164
Query: 422 SIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
+IA PAQ L ++ L ++ ++ PEG+ + +NKRFFF+V N G FMR+
Sbjct: 165 TIALPAQGLIEFRDALAKLIDDYGVEDEPAELPEGSSLTVDNKRFFFDVGSNKYGVFMRV 224
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV + G
Sbjct: 225 SEVKPTYRNSITVPYKVWSKFG 246
>gi|108744013|gb|ABG02279.1| purine-rich element binding protein-alpha [Haplochromis burtoni]
Length = 285
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 30/202 (14%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L + +
Sbjct: 51 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNP 110
Query: 370 ---QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS----- 421
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L
Sbjct: 111 GMVQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGFTQGQ 164
Query: 422 SIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
+IA PAQ L ++ L ++ ++ PEG+ + +NKRFFF+V N G FMR+
Sbjct: 165 TIALPAQGLIEFRDALAKLIDDYGVEDEPAELPEGSSLTVDNKRFFFDVGSNKYGVFMRV 224
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV + G
Sbjct: 225 SEVKPTYRNSITVPYKVWSKFG 246
>gi|449475269|ref|XP_002190794.2| PREDICTED: transcriptional activator protein Pur-alpha [Taeniopygia
guttata]
Length = 405
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 21/199 (10%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLN------ALLTAHQN 371
NK+FY D+KQ+ +F KI+EV ++++ +SMSV RD+L A L Q
Sbjct: 83 NKRFYLDVKQNAKGRFFKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 142
Query: 372 TPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS-----IA 424
+ D +KSE L+++ R+Y++DLK+N R RF+ + Q + G L S IA
Sbjct: 143 PELAQAADEPRRALKSEFLVRENRKYYMDLKENQRGRFLRVRQTVNRGPGLGSTQGQTIA 202
Query: 425 FPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE- 483
PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G FMR+SE
Sbjct: 203 LPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEV 262
Query: 484 -------ISTPSKVLTNIG 495
I+ P KV G
Sbjct: 263 KPTYRNSITVPYKVWAKFG 281
>gi|363738896|ref|XP_003642090.1| PREDICTED: transcriptional activator protein Pur-alpha, partial
[Gallus gallus]
Length = 275
Score = 116 bits (290), Expect = 5e-23, Method: Composition-based stats.
Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 21/199 (10%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLN------ALLTAHQN 371
NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L A L Q
Sbjct: 5 NKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 64
Query: 372 TPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKL-----SSIA 424
+ D +KSE L+++ R+Y++DLK+N R RF+ + Q + G L +IA
Sbjct: 65 PELAQAADEPRRALKSEFLVRENRKYYMDLKENQRGRFLRVRQTVNRGPGLGAAQGQTIA 124
Query: 425 FPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE- 483
PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G FMR+SE
Sbjct: 125 LPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEV 184
Query: 484 -------ISTPSKVLTNIG 495
I+ P KV G
Sbjct: 185 KPTYRNSITVPYKVWAKFG 203
>gi|157123034|ref|XP_001659993.1| pur-alpha [Aedes aegypti]
gi|108874553|gb|EAT38778.1| AAEL009370-PA [Aedes aegypti]
Length = 269
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 14/183 (7%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--LTA 368
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI + +S LRDHL+ A
Sbjct: 42 TKMLQIQSKRFYLDVKQNRG-RFIKVAEIG-DGRRSQIFLVLSTAAELRDHLSTFSDYYA 99
Query: 369 HQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQ 428
+ + +KSE++I D RRY+L ++N R RF+ +SQ + GG S IA PAQ
Sbjct: 100 SLGSSNSGHVSDGKLKSEMMI-DNRRYYL-TEENVRGRFLRVSQTITRGGPRSQIAIPAQ 157
Query: 429 DLGPIIGLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+ ++DL +E DG PEG +MR +NK F+F++ +N +G +MR+SE
Sbjct: 158 GMIEFRDALTDLLEEFGT---NDGGFKGELPEGRHMRVDNKNFYFDIGQNSRGIYMRVSE 214
Query: 484 IST 486
+ +
Sbjct: 215 VKS 217
>gi|225709160|gb|ACO10426.1| Transcriptional activator protein Pur-alpha [Caligus rogercresseyi]
Length = 271
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ 370
++M Q +K+FY D+K++ KFIKI+EV + R+QI + +S RD LN+
Sbjct: 40 SRMVQVQSKRFYLDVKENTRGKFIKIAEVGNEGKRSQIFLGLSTAAEFRDKLNSFEEFFN 99
Query: 371 N-TP--RHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
P +D +KSE+++K+ R+Y+LDLK N RF+ +SQ G+ ++IA PA
Sbjct: 100 KLDPINADSGKDAIELKSEIMVKENRKYYLDLKQNNWGRFLRVSQAYSRSGRRTNIAIPA 159
Query: 428 QDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTP 487
Q + + +++L +E + + E +++ +NK +FF + K+ +G MRISE+
Sbjct: 160 QGMSDLRSALTELLEEFGTEDCTEARTEAPHLQVDNKSYFFTLDKSNRGIAMRISEVKPG 219
Query: 488 SKVLTNIGIKS 498
S+ I KS
Sbjct: 220 SQSSITIPDKS 230
>gi|57164217|ref|NP_001009447.1| transcriptional activator protein Pur-alpha [Ovis aries]
gi|9652255|gb|AAF91464.1|AF282406_1 DNA binding protein pur-alpha [Ovis aries]
Length = 321
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 102/205 (49%), Gaps = 34/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+KQ+ +F+KI+EV + + +SMSV RD+L
Sbjct: 70 NKRFYLDVKQNAKGRFLKIAEVGAGGNKT-LTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 128
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 129 PDLAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 182
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 183 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 242
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 243 MRVSEVKPTYRNSITVPYKVWAKFG 267
>gi|397518434|ref|XP_003829392.1| PREDICTED: transcriptional activator protein Pur-alpha, partial
[Pan paniscus]
Length = 250
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 33/202 (16%)
Query: 321 FYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--------------L 366
FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L L
Sbjct: 1 FYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDL 60
Query: 367 TAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS---- 422
Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 61 AQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQ 114
Query: 423 -IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G FMR+
Sbjct: 115 TIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRV 174
Query: 482 SE--------ISTPSKVLTNIG 495
SE I+ P KV G
Sbjct: 175 SEVKPTYRNSITVPYKVWAKFG 196
>gi|26344676|dbj|BAC35987.1| unnamed protein product [Mus musculus]
Length = 321
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 33/205 (16%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL------------ 365
NK+FY D+K + F+KI+EV ++++ +SMSV RD+L
Sbjct: 69 NKRFYLDVKHNAKGLFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQP 128
Query: 366 --LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS- 422
L Q PR +KSE L+++ R+Y+++LK+N R RF+ I Q + G L S
Sbjct: 129 PDLAQAQXEPRR------ALKSEFLVRENRKYYMNLKENQRGRFLRIRQTVNRGPGLGST 182
Query: 423 ----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G F
Sbjct: 183 QGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVF 242
Query: 479 MRISE--------ISTPSKVLTNIG 495
MR+SE I+ P KV G
Sbjct: 243 MRVSEVKPTYRNSITVPYKVWAKFG 267
>gi|405974890|gb|EKC39502.1| Exonuclease 3'-5' domain-containing protein 1 [Crassostrea gigas]
Length = 456
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 12/226 (5%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIM 80
+I DV+ ++ + + ES +G+D EG+ LG +G ++LV + G +++FD+ ++
Sbjct: 9 VIEDVRRCRTVVDLLARESVLGVDCEGISLGAEGPLTLVQVGDSAGHVYLFDILKDKRLL 68
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
GKL +LES ++KV+H D+ L F + L+NV+DTQ A +Q R L+
Sbjct: 69 TQGKLGTLLESQTVVKVMHSCSNDSAALYHQFGVTLRNVFDTQVANIIIQEHKGRRLAP- 127
Query: 141 LVPHTIGLNDLLKFY--KISPNNFKKNIQNLY-RENPHIWKTRPLTSDMLLYAAADVESL 197
+ L + + Y K K N+Q + E +W RP+T DM+LYAA DV +
Sbjct: 128 ----LLKLAAICEEYDGKAFSTELKDNVQTEWITETSDLWAKRPMTEDMILYAAGDVTVI 183
Query: 198 LALFHRMTKEYALKQNRLL--LDNLIYETLFNHVVPLNIRKRRQFR 241
+ + K Y L++N+L+ + E +F H + I+++R+ R
Sbjct: 184 VPEVYENQKRY-LEENKLMYKFQERVQEEIFFH-IDQTIKQKRKDR 227
>gi|256078598|ref|XP_002575582.1| PUR-alpha-like protein [Schistosoma mansoni]
gi|350644533|emb|CCD60732.1| PUR-alpha-like protein [Schistosoma mansoni]
Length = 279
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 110/191 (57%), Gaps = 8/191 (4%)
Query: 300 SANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLR 359
S ++ + + +K + NK+FY DIKQ+K +F+KI+EV +++I +SM V ++
Sbjct: 23 SDGQQEEQELASKALRIQNKRFYLDIKQNKRGRFVKITEVGNGGQKSRILMSMPVALEMK 82
Query: 360 DHLNALLTAHQNTPRHRYRD---THTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPV 416
+ +N L + P H I S+++++D+RRY+LDLK+N R RF+ ++ +L +
Sbjct: 83 EKINKLSDTYSQLPSHNRESLAQDGRIASDIIVRDSRRYYLDLKENERGRFLRLA-MLSM 141
Query: 417 GGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDED---GAPEGNYMRCNNKRFFFNVSKN 473
G ++ IA PAQ + + ++DL Q +S + D PE + NK F+F+V N
Sbjct: 142 GVRV-QIAIPAQGMIELRNALTDLIQGYSGDMENDIFSDLPESKVLFVGNKTFYFDVGSN 200
Query: 474 GKGTFMRISEI 484
G F+RISE+
Sbjct: 201 RFGVFLRISEV 211
>gi|256078600|ref|XP_002575583.1| PUR-alpha-like protein [Schistosoma mansoni]
gi|7595982|gb|AAF64527.1|AF254148_1 PUR-alpha-like protein [Schistosoma mansoni]
gi|350644534|emb|CCD60733.1| PUR-alpha-like protein [Schistosoma mansoni]
Length = 267
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 10/193 (5%)
Query: 298 KESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGH 357
K+ EE + + +K + NK+FY DIKQ+K +F+KI+EV +++I +SM V
Sbjct: 11 KDGQQEE--QELASKALRIQNKRFYLDIKQNKRGRFVKITEVGNGGQKSRILMSMPVALE 68
Query: 358 LRDHLNALLTAHQNTPRHRYRD---THTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
+++ +N L + P H I S+++++D+RRY+LDLK+N R RF+ ++ +L
Sbjct: 69 MKEKINKLSDTYSQLPSHNRESLAQDGRIASDIIVRDSRRYYLDLKENERGRFLRLA-ML 127
Query: 415 PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDED---GAPEGNYMRCNNKRFFFNVS 471
+G ++ IA PAQ + + ++DL Q +S + D PE + NK F+F+V
Sbjct: 128 SMGVRV-QIAIPAQGMIELRNALTDLIQGYSGDMENDIFSDLPESKVLFVGNKTFYFDVG 186
Query: 472 KNGKGTFMRISEI 484
N G F+RISE+
Sbjct: 187 SNRFGVFLRISEV 199
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 378 RDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSI--AFP-AQDLGPII 434
++ + S+ L +R++LD+K N R RFV I+++ GG+ S I + P A ++ I
Sbjct: 15 QEEQELASKALRIQNKRFYLDIKQNKRGRFVKITEV-GNGGQKSRILMSMPVALEMKEKI 73
Query: 435 GLISDLQQEHSCPEDEDGAPEG----NYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKV 490
+SD + E A +G + + +++R++ ++ +N +G F+R++ +S +V
Sbjct: 74 NKLSDTYSQLPSHNRESLAQDGRIASDIIVRDSRRYYLDLKENERGRFLRLAMLSMGVRV 133
>gi|56757443|gb|AAW26889.1| SJCHGC06753 protein [Schistosoma japonicum]
gi|226480008|emb|CAX73300.1| Transcriptional activator protein Pur-beta [Schistosoma japonicum]
Length = 266
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 10/193 (5%)
Query: 298 KESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGH 357
K+ EE + + +K + NK+FY DIKQ+K +F+KI+EV +++I +SM V
Sbjct: 10 KDGQQEE--QELASKSLRIQNKRFYLDIKQNKRGRFVKITEVGNGGQKSRILMSMPVALE 67
Query: 358 LRDHLNALLTAHQNTPRHRYRD---THTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
+++ +N L + P H I S+++++D+RRY+LDLK+N R RF+ ++ +L
Sbjct: 68 MKEKINKLSDTYSQLPSHNRESLAQDGRIASDIIVRDSRRYYLDLKENERGRFLRLA-ML 126
Query: 415 PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDED---GAPEGNYMRCNNKRFFFNVS 471
+G ++ IA PAQ + + ++DL Q +S + D PE + NK F+F+V
Sbjct: 127 SMGVRV-QIAIPAQGMIELRNALTDLIQGYSGDMENDIFSDLPESKVLFVGNKTFYFDVG 185
Query: 472 KNGKGTFMRISEI 484
N G F+RISE+
Sbjct: 186 SNRFGVFLRISEV 198
>gi|374675378|gb|AEZ56921.1| purine-rich element binding protein A-like protein, partial
[Branchiostoma belcheri]
Length = 200
Score = 110 bits (274), Expect = 4e-21, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 101/181 (55%), Gaps = 15/181 (8%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLN-- 363
++ + TK +K+FY D+KQ++ +F+KI+EV ++++ +SMS RDHL
Sbjct: 25 VQELATKTLHIQSKRFYLDVKQNRRGRFLKIAEVGAGGNKSRLTLSMSTAAEFRDHLTDF 84
Query: 364 -----ALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGG 418
L A+ + P R +KSE ++K+ RRY+LDLK+N R RF+ +SQ + G
Sbjct: 85 SEHCAQLGPANPDNPPEDGR----LKSETMVKENRRYYLDLKENARGRFLRVSQTVNRGP 140
Query: 419 KLSSIAFPAQDLGPIIGLISDLQQEHSCPE---DEDGAPEGNYMRCNNKRFFFNVSKNGK 475
+ + IA PAQ L +++L E + ++ PEG +MR NK F+F++ N +
Sbjct: 141 R-TQIALPAQGLVEFRDALTELLDEFGTDDMSAEQPELPEGRHMRVENKNFYFDIGSNNR 199
Query: 476 G 476
G
Sbjct: 200 G 200
Score = 48.1 bits (113), Expect = 0.022, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQ 442
+ ++ L ++R++LD+K N R RF+ I+++ GG S + ++D
Sbjct: 28 LATKTLHIQSKRFYLDVKQNRRGRFLKIAEV-GAGGNKSRLTLSMSTAAEFRDHLTDFS- 85
Query: 443 EHSC---PEDEDGAPEGNYMRCN-----NKRFFFNVSKNGKGTFMRISE 483
EH P + D PE ++ N+R++ ++ +N +G F+R+S+
Sbjct: 86 EHCAQLGPANPDNPPEDGRLKSETMVKENRRYYLDLKENARGRFLRVSQ 134
>gi|427797489|gb|JAA64196.1| Putative transcriptional regulator of the pur family
single-stranded-dna-binding protein, partial
[Rhipicephalus pulchellus]
Length = 196
Score = 109 bits (273), Expect = 6e-21, Method: Composition-based stats.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
Query: 336 ISEVNMDQTRNQIHISMSVVGHLRDHLNAL--LTAHQNTPR-HRYRDTHTIKSEVLIKDT 392
+ +V + ++++ ++MS RDHL + L A P + +KSE++IKD
Sbjct: 1 VQQVGVGGRKSRLLLAMSTAAEFRDHLTSFSELYASLGPPNPENLPEDGKLKSEIMIKDN 60
Query: 393 RRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
RRY+LDLK+N R RF+ +SQ + GG S IA PAQ + ++DL +E +DG
Sbjct: 61 RRYYLDLKENSRGRFLRVSQTIARGGPRSQIAIPAQGMIEFRDALTDLLEEFGT---DDG 117
Query: 453 A-----PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
A PEG +MR NK F+F++ +N +G +MRISE+ + I KS
Sbjct: 118 AFKGELPEGRHMRVENKTFYFDIGQNTRGIYMRISEVKNNFRAAITIPEKS 168
>gi|108744015|gb|ABG02280.1| purine-rich element binding protein-beta [Haplochromis burtoni]
Length = 296
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 42/220 (19%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +FIKI+EV +++++ +S+SV RD+L + +
Sbjct: 41 NKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRDYLGDFIEHYAQLGPSSP 100
Query: 370 ----QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL----------P 415
Q T +KSE L+++ R+Y+LDLK+N R RF+ I Q + P
Sbjct: 101 EQIAQATAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPSFGVGGP 160
Query: 416 VGGKLSS--IAFPAQDLGPIIGLISDLQQEHSCPEDE------DGA----PEGNYMRCNN 463
VGG L+ IA PAQ L ++ L ++ ++E G PEG + ++
Sbjct: 161 VGGMLAGQTIALPAQGLIEFRDALAKLIDDYGGDDEEMTGGMAAGGYGELPEGTSIMVDS 220
Query: 464 KRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
KRFFF+V N G F+R+SE I+ P K + G
Sbjct: 221 KRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWSKFG 260
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 24 QRDQETQELASKRLDIQNKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRD 83
Query: 430 -LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGKGT 477
LG I + L S PE EDG P + ++ N++++ ++ +N +G
Sbjct: 84 YLGDFIEHYAQLG--PSSPEQIAQATAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGR 141
Query: 478 FMRI 481
F+RI
Sbjct: 142 FLRI 145
>gi|324505097|gb|ADY42195.1| Transcriptional activator protein Pur-alpha [Ascaris suum]
gi|324525711|gb|ADY48586.1| Transcriptional activator protein Pur-alpha, partial [Ascaris suum]
Length = 259
Score = 108 bits (270), Expect = 1e-20, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 24/218 (11%)
Query: 292 RMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHIS 351
R H E+E A +KM Q +K+FY D+KQ+ +FIK++EV + ++++ +S
Sbjct: 11 RAPHGEQELA---------SKMLQVQSKRFYVDVKQNNRGRFIKLAEVGLGGRKSRLILS 61
Query: 352 MSVVGHLRDHLNALLT---AHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFV 408
M+ RDHL+ + + + + +KSE++I ++RRY+LDLK+N R R++
Sbjct: 62 MTAAVAFRDHLDKFVKFFDGLASGEQLNVGENGQLKSEIIIYESRRYYLDLKENQRGRYL 121
Query: 409 TISQLLPVG--GKLSSIAFPAQDLGPIIGLISDLQQE-------HSCPEDEDGAPEGNYM 459
+SQ + G G S IA PA + + + +L + S P+ E PE +
Sbjct: 122 RVSQTVSRGVPGVRSQIALPAPGMAQLRDALKELIDKFGEGYLNESDPDIE--LPEPKQV 179
Query: 460 RC-NNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGI 496
R NNK F+F+V N +GTF+RISE+ S ++I +
Sbjct: 180 RAENNKLFYFDVGHNERGTFVRISEVKQISGHRSSIAV 217
>gi|348503960|ref|XP_003439530.1| PREDICTED: transcriptional activator protein Pur-beta-like
[Oreochromis niloticus]
Length = 303
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 54/226 (23%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALL----------- 366
NK+FY D+KQ+ +FIKI+EV +++++ +S+SV RD+L +
Sbjct: 48 NKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRDYLGDFIEHYAQLGPSSP 107
Query: 367 -------TAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL----- 414
PR +KSE L+++ R+Y+LDLK+N R RF+ I Q +
Sbjct: 108 EQIAQAAAGEDGGPR------RALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPS 161
Query: 415 -----PVGGKLSS--IAFPAQDLGPIIGLISDLQQEHSCPEDE----------DGAPEGN 457
PVGG L+ IA PAQ L ++ L ++ ++E PEG
Sbjct: 162 FGVGGPVGGMLAGQTIALPAQGLIEFRDALAKLIDDYGGDDEEMTGGTAAGGYGELPEGT 221
Query: 458 YMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
+ ++KRFFF+V N G F+R+SE I+ P K + G
Sbjct: 222 SIMVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWSKFG 267
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 31 QRDQETQELASKRLDIQNKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRD 90
Query: 430 -LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGKGT 477
LG I + L S PE EDG P + ++ N++++ ++ +N +G
Sbjct: 91 YLGDFIEHYAQLG--PSSPEQIAQAAAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGR 148
Query: 478 FMRI 481
F+RI
Sbjct: 149 FLRI 152
>gi|322788034|gb|EFZ13875.1| hypothetical protein SINV_15885 [Solenopsis invicta]
Length = 880
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 47/273 (17%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I +E+ + I+N K + D EG++LGV G+++LV + +G
Sbjct: 383 VLQQTRVIATSRESLQVIEDIINPRKPPPDGKVIISFDCEGINLGVKGQLTLVQIGTMSG 442
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRI-------------------------------- 94
+ ++FD+ +CP ++ G L ++LE +
Sbjct: 443 QAYVFDLVTCPNLIQAGGLQKLLEHPHVIKVKMFYIVYNKQKYIRYIIISQRYANTSTYV 502
Query: 95 -----LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLN 149
L+VIH D+ L + F I L NV+DTQ A LQ + + + LN
Sbjct: 503 KSCLFLQVIHDCRNDSVNLYNQFKITLTNVFDTQAAHAVLQFQETGKPVYKV--KNVNLN 560
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYA 209
L Y N K+ ++N+YR++ W RP+T DML+YA++DV SL+ +
Sbjct: 561 TLCDHYGAPCNPLKEQLKNIYRKDQRYWSRRPMTRDMLIYASSDVLSLVPQVYNAMSRLI 620
Query: 210 LKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
+ + L L E + H+ P +++ R++ R+
Sbjct: 621 KPEVQDLFAELCEEQIQMHIRPSDVKARKKQRK 653
>gi|390359569|ref|XP_003729510.1| PREDICTED: uncharacterized protein LOC100893986 [Strongylocentrotus
purpuratus]
Length = 458
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 25 VQEAQSAMATILNES-KVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
+Q A+ T N V LD EG L G+++LV +A GK+++FDVY CP + DG
Sbjct: 252 LQRAERLYGTGSNPGLVVALDCEGCSLSKTGRLTLVQIATMEGKVYLFDVYRCPYLFHDG 311
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ--------LSDPR 135
L + LES+ +LKVIH D L F I L N++DT A+ LQ PR
Sbjct: 312 LLADFLESEAVLKVIHDCRKDTAALYHQFGITLTNIFDTSIAYVVLQNQCQVAGTKPRPR 371
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
+ Q+L IG + + F KK+I+ P+ W TRPL ++M+ YAAADV
Sbjct: 372 ISFQNLC-EMIG--EEMDF------TIKKSIKKKMVYIPNFWATRPLKTNMINYAAADVY 422
Query: 196 SLL 198
LL
Sbjct: 423 MLL 425
>gi|262118742|pdb|3K44|A Chain A, Crystal Structure Of Drosophila Melanogaster Pur-Alpha
gi|262118743|pdb|3K44|B Chain B, Crystal Structure Of Drosophila Melanogaster Pur-Alpha
gi|262118744|pdb|3K44|C Chain C, Crystal Structure Of Drosophila Melanogaster Pur-Alpha
gi|262118745|pdb|3K44|D Chain D, Crystal Structure Of Drosophila Melanogaster Pur-Alpha
Length = 146
Score = 107 bits (267), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 3/136 (2%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL--LTA 368
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ A
Sbjct: 7 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 66
Query: 369 HQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA PA
Sbjct: 67 SLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 126
Query: 428 QDLGPIIGLISDLQQE 443
Q + ++DL +E
Sbjct: 127 QGMIEFRDALTDLLEE 142
Score = 44.3 bits (103), Expect = 0.32, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK------LSSIAFPAQDLGPIIGL 436
+ +++L ++R++LD+K N R RF+ ++++ G + LS+ A L
Sbjct: 5 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDY 64
Query: 437 ISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEIST 486
+ L ++ EDG + M + +R++ ++ +N +G F+R+S+ T
Sbjct: 65 YASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTIT 114
>gi|328872117|gb|EGG20484.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
fasciculatum]
Length = 347
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 7 PQNNLLRTL------MNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVS 60
P N ++R L + LI DVQ+ + I E V DLEG ++G +G+VSLV
Sbjct: 106 PSNAIVRQLGENESSFDGIFLINDVQQLKRVFEIINKEHVVAFDLEGWEMGKNGEVSLVQ 165
Query: 61 LALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVY 120
+ L+NG++FIFD+ F L ++LES ILK++H D+ L + + L +VY
Sbjct: 166 IGLKNGRVFIFDIMVLGHNAFKHGLKDLLESKIILKIVHDCRRDSEILYHRYQVTLDHVY 225
Query: 121 DTQCAFTALQLSDPRLLSQDLVP-HTIGLNDLLKFYKISPN-----NFKKNIQNLYRENP 174
D Q A LQ + VP GL +L Y P N K ++L++ N
Sbjct: 226 DIQIAHALLQKK-----KEGNVPIRRFGLAELTDLYAPKPYAQQAINVKHKGRDLFKNNL 280
Query: 175 HIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
IW+ RPL ++ Y A DV LL +++ +T +
Sbjct: 281 DIWRQRPLPPTIIDYCALDVIVLLPIYNILTPQ 313
>gi|195064422|ref|XP_001996566.1| GH24015 [Drosophila grimshawi]
gi|193892112|gb|EDV90978.1| GH24015 [Drosophila grimshawi]
Length = 188
Score = 106 bits (265), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 300 SANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLR 359
+ NE+ + TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S R
Sbjct: 38 NVNEQELA---TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFR 94
Query: 360 DHLNAL--LTAHQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPV 416
DHL++ A P + +KSE+++KD RRY+LDLK+N R RF+ +SQ +
Sbjct: 95 DHLSSFSDYYASLGPPNTDNLPEDGKLKSEMMMKDNRRYYLDLKENTRGRFLRVSQTITR 154
Query: 417 GGKLSSIAFPAQDLGPIIGLISDLQQE 443
GG S IA PAQ + ++DL +E
Sbjct: 155 GGPRSQIALPAQGMIEFRDALTDLLEE 181
Score = 47.4 bits (111), Expect = 0.037, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK------LSSIAFPAQDLGPIIGL 436
+ +++L ++R++LD+K N R RF+ ++++ G + LS+ A L
Sbjct: 44 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDY 103
Query: 437 ISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEIST 486
+ L ++ EDG + M +N+R++ ++ +N +G F+R+S+ T
Sbjct: 104 YASLGPPNTDNLPEDGKLKSEMMMKDNRRYYLDLKENTRGRFLRVSQTIT 153
>gi|405950541|gb|EKC18522.1| Exonuclease 3'-5' domain-containing protein 1 [Crassostrea gigas]
Length = 586
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 25/245 (10%)
Query: 8 QNNLLRTLMNRT--NLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQN 65
+N ++ M R +I DV + + + E + +D EG+ LGVDG ++LV + +
Sbjct: 122 HDNSMKQRMARQLPEVIEDVGRCKQVVDVLERERVLAVDCEGVSLGVDGPLTLVQVGNYS 181
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
G++++FD+ ++ G+L +LES I+KVI D+ L F + LKNV+DTQ A
Sbjct: 182 GEVYLFDILRNKDLLSRGRLGSLLESPNIIKVIQSCSNDSAALYHQFKVTLKNVFDTQVA 241
Query: 126 FTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYREN---------PHI 176
+Q R L+ LLK I K +++ +
Sbjct: 242 NLVIQEHQGRRLAP-----------LLKLAAICEEYGGKKFSTELKDDVQAEWMTVTGDL 290
Query: 177 WKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLL--LDNLIYETLFNHVVPLNI 234
W RP+T +M+LYAA DV++++ + K Y L+ N LL + + E +F + P
Sbjct: 291 WAKRPMTDEMILYAAGDVKAIIPEVYENQKRY-LEDNNLLKKFEERVLEEIFCFIDPSFK 349
Query: 235 RKRRQ 239
+KR++
Sbjct: 350 QKRKE 354
>gi|170588853|ref|XP_001899188.1| PurA ssDNA and RNA-binding protein [Brugia malayi]
gi|158593401|gb|EDP31996.1| PurA ssDNA and RNA-binding protein [Brugia malayi]
Length = 261
Score = 102 bits (255), Expect = 7e-19, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 15/199 (7%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLT--- 367
+KM Q +K+FY D+KQ+ +FIK++EV + ++++ +SMS RDHL+ +
Sbjct: 21 SKMLQVQSKRFYVDVKQNNRGRFIKLAEVGLGGRKSRLILSMSAAVAFRDHLDKFVKFFD 80
Query: 368 --AHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG--GKLSSI 423
A N P + +KSE+++ ++RRY+L LK+N R R++ +SQ + G G I
Sbjct: 81 GLASGNEP--IVSENGQLKSEIIVHESRRYYLSLKENQRGRYLRVSQRVSRGSSGPRLQI 138
Query: 424 AFPAQDLGPIIGLISDLQQEHSCPE-DEDGA----PEGNYMRC-NNKRFFFNVSKNGKGT 477
A PA + + +++L +++ +E A PE ++R NNK F+F+V N +GT
Sbjct: 139 ALPAPGMTQLRDALNELIDKYAEGYLNESDANVELPEPKHVRAENNKIFYFDVGHNERGT 198
Query: 478 FMRISEISTPSKVLTNIGI 496
F+RISE+ S ++I +
Sbjct: 199 FVRISEVKQISGSRSSIAV 217
Score = 46.2 bits (108), Expect = 0.072, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 318 NKKFYFDIKQSKSTKFIKISE-VNMDQTRNQIHISMSVVG--HLRDHLNALLTAHQNTPR 374
++++Y +K+++ +++++S+ V+ + ++ I++ G LRD LN L+ +
Sbjct: 105 SRRYYLSLKENQRGRYLRVSQRVSRGSSGPRLQIALPAPGMTQLRDALNELIDKYAEGYL 164
Query: 375 HRYRDTHTIKSE---VLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLG 431
+ D + E V ++ + ++ D+ N R FV IS++ + G SSIA P G
Sbjct: 165 NE-SDANVELPEPKHVRAENNKIFYFDVGHNERGTFVRISEVKQISGSRSSIAVPMSSWG 223
Query: 432 PIIGLISDLQQE 443
++++LQ++
Sbjct: 224 AFRDVLAELQEK 235
Score = 41.6 bits (96), Expect = 1.8, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 374 RHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS------SIAFPA 427
RH + S++L ++R+++D+K N R RF+ +++ + +GG+ S S A
Sbjct: 10 RHPPHGEQELASKMLQVQSKRFYVDVKQNNRGRFIKLAE-VGLGGRKSRLILSMSAAVAF 68
Query: 428 QD-LGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+D L + L + E+G + + ++R++ ++ +N +G ++R+S+
Sbjct: 69 RDHLDKFVKFFDGLASGNEPIVSENGQLKSEIIVHESRRYYLSLKENQRGRYLRVSQ 125
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 278 VPLANAKLLNNPINRMFHKEKE---SANEERIEVIDTKMYQCFNKK-FYFDIKQSKSTKF 333
+P L + +N + K E + ++ +E+ + K + N K FYFD+ ++ F
Sbjct: 140 LPAPGMTQLRDALNELIDKYAEGYLNESDANVELPEPKHVRAENNKIFYFDVGHNERGTF 199
Query: 334 IKISEV-NMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRYRDTHTIKSEVLIKDT 392
++ISEV + +R+ I + MS G RD L L T TIKS++ ++
Sbjct: 200 VRISEVKQISGSRSSIAVPMSSWGAFRDVLAELQEKMMATKGVENDTERTIKSDIKLEHN 259
Query: 393 R 393
+
Sbjct: 260 K 260
>gi|440795369|gb|ELR16493.1| 3'5' exonuclease domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 419
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 31/224 (13%)
Query: 21 LITDVQEAQSAMATIL-NESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCPL 78
++ DVQ + + +IL ++ + LD EG+DLG G + LV +A+++G+ F+FDV
Sbjct: 207 IVEDVQRCREVVESILAHDHPLALDCEGVDLGDKSGSLCLVQIAMRSGQCFLFDVTKGGS 266
Query: 79 IMF-DGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLL 137
+F +G L VL+ +LKV H DA L + ++ L +V+DTQ Q
Sbjct: 267 QLFSEGGLRRVLKDVHVLKVGHDLRADASALFAEHSVLLNHVFDTQVLTVGKQ------- 319
Query: 138 SQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
+ +GLN +LK Y S N KK ++ + + W RPLT +M+ YA+ DV L
Sbjct: 320 ------NQVGLNPMLKLYANSQNELKKAVKKAWTRDRLYWTRRPLTEEMVGYASLDVAFL 373
Query: 198 LALFHRMTKEYALKQNRLLLDNLIYETLFNHVVP---LNIRKRR 238
L F M AL+Q + LF+H L I +RR
Sbjct: 374 LQAFDSMAA--ALEQ----------QCLFDHAAAGSRLYIDRRR 405
>gi|47228540|emb|CAG05360.1| unnamed protein product [Tetraodon nigroviridis]
Length = 264
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 39/222 (17%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
++ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +S+SV RD+L
Sbjct: 21 DQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRDYL 80
Query: 363 NALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
+ + ++P + + +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 81 GDFIEHYAQLGPSSPEQIAQASAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 140
Query: 411 SQLLP--------------VGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA--- 453
Q + + G+ +IA PAQ L ++ L ++ +DE
Sbjct: 141 RQTVNRGPGFGVGGPVGGMLSGQ--TIALPAQGLIEFRDALAKLIDDYGGDDDELSGGMA 198
Query: 454 -------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 199 AGGYSELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEVK-PS 239
Score = 48.5 bits (114), Expect = 0.017, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 19 QRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRD 78
Query: 430 -LGPIIGLISDL-----QQEHSCPEDEDGAP----EGNYMRCNNKRFFFNVSKNGKGTFM 479
LG I + L +Q EDG P + ++ N++++ ++ +N +G F+
Sbjct: 79 YLGDFIEHYAQLGPSSPEQIAQASAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFL 138
Query: 480 RISE 483
RI +
Sbjct: 139 RIRQ 142
>gi|223649088|gb|ACN11302.1| Transcriptional activator protein Pur-beta [Salmo salar]
Length = 299
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 40/219 (18%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L
Sbjct: 29 EQETQELASKRLDIQNKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYL 88
Query: 363 NALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
+ + ++P + + +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 89 GDFIEHYAQLGPSSPEQIAQSSVGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 148
Query: 411 SQ---------------LLPVGGKLSSIAFPAQDL----GPIIGLISDL---QQEHSCPE 448
Q + G +IA PAQ L + LI D +E +C
Sbjct: 149 RQTVNRGPGFGVGGPGGGMQAG---QTIALPAQGLIEFRDALAKLIDDYGGDDEELACGT 205
Query: 449 DEDGA---PEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
G PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 206 AVGGYGELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEV 244
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 373 PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPA 427
P R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A
Sbjct: 25 PFQREQETQELASKRLDIQNKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSMSVAAEF 84
Query: 428 QD-LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGK 475
+D LG I + L S PE EDG P + ++ N++++ ++ +N +
Sbjct: 85 RDYLGDFIEHYAQLG--PSSPEQIAQSSVGEDGGPRRALKSEFLVRENRKYYLDLKENQR 142
Query: 476 GTFMRISE 483
G F+RI +
Sbjct: 143 GRFLRIRQ 150
>gi|323650270|gb|ADX97221.1| transcriptional activator protein pur-beta [Perca flavescens]
Length = 261
Score = 101 bits (252), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 39/222 (17%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
++ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +S+SV RD+L
Sbjct: 7 DQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRDYL 66
Query: 363 NALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
+ + ++P + T +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 67 GDFIEHYAQLGPSSPEQIAQATAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 126
Query: 411 SQLLP--------------VGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA--- 453
Q + + G+ +IA PAQ L ++ L ++ ++E
Sbjct: 127 RQTVNRGPGFGVGGPAGGMLSGQ--TIALPAQGLIEFRDALAKLIDDYGGDDEELAGGTA 184
Query: 454 -------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 185 AGGYSELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEVK-PS 225
Score = 48.1 bits (113), Expect = 0.018, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 5 QRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRD 64
Query: 430 -LGPIIGLISDL-----QQEHSCPEDEDGAP----EGNYMRCNNKRFFFNVSKNGKGTFM 479
LG I + L +Q EDG P + ++ N++++ ++ +N +G F+
Sbjct: 65 YLGDFIEHYAQLGPSSPEQIAQATAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFL 124
Query: 480 RISE 483
RI +
Sbjct: 125 RIRQ 128
>gi|410903844|ref|XP_003965403.1| PREDICTED: transcriptional activator protein Pur-beta-like
[Takifugu rubripes]
Length = 291
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 58/228 (25%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALL----------- 366
NK+FY D+KQ+ +FIKI+EV +++++ +S+SV RD+L +
Sbjct: 36 NKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRDYLGDFIEHYAQLGPSSP 95
Query: 367 -------TAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLP---- 415
PR +KSE L+++ R+Y+LDLK+N R RF+ I Q +
Sbjct: 96 EQIAQASAGEDGGPR------RALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPG 149
Query: 416 ----------VGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE-DGA---------PE 455
+ G+ +IA PAQ L ++ L ++ +DE G PE
Sbjct: 150 FGVGGPVGGMLSGQ--TIALPAQGLIEFRDALAKLIDDYGGDDDELSGGMAAGGYSELPE 207
Query: 456 GNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
G + ++KRFFF+V N G F+R+SE I+ P K + G
Sbjct: 208 GTSIMVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWSKFG 255
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 19 QRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRD 78
Query: 430 -LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGKGT 477
LG I + L S PE EDG P + ++ N++++ ++ +N +G
Sbjct: 79 YLGDFIEHYAQLG--PSSPEQIAQASAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGR 136
Query: 478 FMRI 481
F+RI
Sbjct: 137 FLRI 140
>gi|312090447|ref|XP_003146618.1| PurA ssDNA and RNA-binding protein [Loa loa]
gi|307758217|gb|EFO17451.1| PurA ssDNA and RNA-binding protein [Loa loa]
Length = 261
Score = 101 bits (251), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 113/197 (57%), Gaps = 11/197 (5%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLN---ALLT 367
+KM Q +K+FY D+KQ+ +FIK++EV + ++++ +SMS RDHL+ L
Sbjct: 21 SKMLQVQSKRFYVDVKQNNRGRFIKLAEVGLGGRKSRLILSMSAAVAFRDHLDKFVKFLD 80
Query: 368 AHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKL--SSIAF 425
+ + +KSE+++ ++RRY+L LK+N R R++ +SQ + G + S IA
Sbjct: 81 GLASGEEPIVSENGQLKSEIIVYESRRYYLSLKENQRGRYLRVSQRVSRGNSVPRSQIAL 140
Query: 426 PAQDLGPIIGLISDLQQEHS---CPEDEDG--APEGNYMRC-NNKRFFFNVSKNGKGTFM 479
PA + + +++L +++ E++ PE ++R NNK F+F+V N +GTF+
Sbjct: 141 PAPGMTQLRDALNELIDKYAEGYLNENDVNLELPEPKHVRAENNKIFYFDVGHNERGTFV 200
Query: 480 RISEISTPSKVLTNIGI 496
RISE+ S ++I +
Sbjct: 201 RISEVKQISGSRSSIAV 217
Score = 49.3 bits (116), Expect = 0.010, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 318 NKKFYFDIKQSKSTKFIKISE-VNMDQT--RNQIHISMSVVGHLRDHLNALLTAHQNTPR 374
++++Y +K+++ +++++S+ V+ + R+QI + + LRD LN L+ +
Sbjct: 105 SRRYYLSLKENQRGRYLRVSQRVSRGNSVPRSQIALPAPGMTQLRDALNELIDKYAEG-- 162
Query: 375 HRYRDTHTIKSE------VLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQ 428
Y + + + E V ++ + ++ D+ N R FV IS++ + G SSIA P
Sbjct: 163 --YLNENDVNLELPEPKHVRAENNKIFYFDVGHNERGTFVRISEVKQISGSRSSIAVPMS 220
Query: 429 DLGPIIGLISDLQQEHSCPEDEDGAPEG 456
G ++++LQ++ + + EG
Sbjct: 221 SWGAFRDVLAELQEKMMAAKRAENDAEG 248
Score = 42.4 bits (98), Expect = 1.0, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 374 RHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS------SIAFPA 427
RH + S++L ++R+++D+K N R RF+ +++ + +GG+ S S A
Sbjct: 10 RHPSHGEQELASKMLQVQSKRFYVDVKQNNRGRFIKLAE-VGLGGRKSRLILSMSAAVAF 68
Query: 428 QD-LGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+D L + + L E+G + + ++R++ ++ +N +G ++R+S+
Sbjct: 69 RDHLDKFVKFLDGLASGEEPIVSENGQLKSEIIVYESRRYYLSLKENQRGRYLRVSQ 125
>gi|432884619|ref|XP_004074508.1| PREDICTED: transcriptional activator protein Pur-beta-like isoform
1 [Oryzias latipes]
gi|432884621|ref|XP_004074509.1| PREDICTED: transcriptional activator protein Pur-beta-like isoform
2 [Oryzias latipes]
Length = 300
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 38/203 (18%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +FIKI+EV +++++ +S+SV RD+L + +
Sbjct: 45 NKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRDYLGDFIEHYAQLGPSSP 104
Query: 370 ----QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ------------- 412
Q T +KSE L+++ R+Y+LDLK+N R RF+ I Q
Sbjct: 105 EQIAQATAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTANRGPGFGVGGP 164
Query: 413 -LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE--DGA--------PEGNYMRC 461
V G+ +IA PAQ L ++ L ++ +DE G+ PEG +
Sbjct: 165 MGGMVSGQ--TIALPAQGLIEFRDALAKLIDDYGGDDDELTGGSAAGGPAELPEGTSITV 222
Query: 462 NNKRFFFNVSKNGKGTFMRISEI 484
++KRFFF+V N G F+R+SE+
Sbjct: 223 DSKRFFFDVGSNKYGVFLRVSEV 245
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 28 QRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSLSVAAEFRD 87
Query: 430 -LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGKGT 477
LG I + L S PE EDG P + ++ N++++ ++ +N +G
Sbjct: 88 YLGDFIEHYAQLG--PSSPEQIAQATAGEDGGPRRALKSEFLVRENRKYYLDLKENQRGR 145
Query: 478 FMRISEIS 485
F+RI + +
Sbjct: 146 FLRIRQTA 153
>gi|358253634|dbj|GAA53536.1| transcriptional activator protein Pur-beta [Clonorchis sinensis]
Length = 323
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRY 377
NK+FY D+KQ++ +F+KI+E +++I +S++V +++ ++ L + P H
Sbjct: 79 NKRFYLDVKQNRRGRFVKITEAGSGGQKSRILMSIAVALEMQEKVSKLSDIYSQLPSHNP 138
Query: 378 R---DTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPII 434
+ + S+ +++D+RRY+LDLK+N R RF+ ++ L G IA PAQ + +
Sbjct: 139 QCLAQDGRLASDTIVRDSRRYYLDLKENERGRFLRLAML--TMGVRDQIAIPAQGMIELR 196
Query: 435 GLISDLQQEHSCPEDEDG---APEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
++DL E++ + D PE + NK F+F+V N G ++RISE+
Sbjct: 197 NALADLTHEYAGDVENDAFSDLPESKVLFVGNKTFYFDVGSNRYGVYLRISEV 249
>gi|410923519|ref|XP_003975229.1| PREDICTED: transcriptional activator protein Pur-beta-like
[Takifugu rubripes]
Length = 346
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 55/249 (22%)
Query: 295 HKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
H +++S +E + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV
Sbjct: 67 HYQRDSETQE----LASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSV 122
Query: 355 VGHLRDHLNALLTAH------------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDN 402
RD+L + + Q++ +KSE L+++ R+Y+LDLK+N
Sbjct: 123 AAEFRDYLGDFIEHYAQLGPSSPEQIAQSSGGDDTGPRRALKSEFLVRENRKYYLDLKEN 182
Query: 403 GRARFVTISQL------------------LPVGGKLSSIAFPAQDLGPIIGLISDLQQEH 444
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 183 QRGRFLRIRQTVNRGPGFGVGVGGFPGAGLQAG---QTIALPAQGLIEFRDALAKLIDDY 239
Query: 445 SCPEDE----------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------IST 486
E++ PEG + ++KRFFF+V N G F+R+SE I+
Sbjct: 240 GGDEEDLSGGGGAGGYSELPEGTSITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITI 299
Query: 487 PSKVLTNIG 495
P K + G
Sbjct: 300 PFKAWSKFG 308
>gi|156379849|ref|XP_001631668.1| predicted protein [Nematostella vectensis]
gi|156218712|gb|EDO39605.1| predicted protein [Nematostella vectensis]
Length = 207
Score = 100 bits (249), Expect = 4e-18, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 307 EVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQ-TRNQIHISMSVVGHLRDHLNAL 365
E + +K Q +K+FY D+K+++ K+IKISEV+ ++ T+ ++ +S++V RD L
Sbjct: 2 EELCSKSLQIQSKRFYIDLKRNRRGKYIKISEVSTNKSTKRKVILSLAVSREFRDKLTTF 61
Query: 366 ---LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTI-SQLLPVGGKL- 420
L N+ H +KSE + + ++Y+LDLK+N R RF+ + +Q+ G +
Sbjct: 62 AEFLAQQGNSIPHNDSHDGRLKSERIDGENKKYYLDLKENSRGRFLKVCTQICDRRGPMR 121
Query: 421 SSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMR 480
IA PAQ + I +S++ +E S ED P +R KRF+F+V N +G F+R
Sbjct: 122 KEIAIPAQGIVDIRNNLSEVLEECSSDEDALELPASRELRVEQKRFYFDVGSNARGVFLR 181
Query: 481 ISEIS 485
ISE++
Sbjct: 182 ISEVT 186
>gi|237512976|ref|NP_001153631.1| purine-rich element binding protein B-like [Danio rerio]
gi|237512978|ref|NP_001122194.2| purine-rich element binding protein B [Danio rerio]
Length = 317
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 51/226 (22%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ----NTP 373
NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L + + +TP
Sbjct: 57 NKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYLGDFIEHYAQLGPSTP 116
Query: 374 RHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ------------- 412
+ + +KSE L+++ R+Y+LDLK+N R RF+ I Q
Sbjct: 117 EQIAQSSGGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPGGFGAGG 176
Query: 413 -----LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE------DGA----PEGN 457
+ G +IA PAQ L ++ L ++ ++E GA PEG
Sbjct: 177 GVPGGGMQSG---QTIALPAQGLIEFRDALAKLIDDYGGDDEELVGGGCSGAYGELPEGT 233
Query: 458 YMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
+ ++KRFFF+V N G F+R+SE I+ P K + G
Sbjct: 234 SITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWSKFG 279
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 19/126 (15%)
Query: 373 PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPA 427
P R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A
Sbjct: 38 PFQRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSMSVAAEF 97
Query: 428 QD-LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGK 475
+D LG I + L S PE EDG P + ++ N++++ ++ +N +
Sbjct: 98 RDYLGDFIEHYAQLG--PSTPEQIAQSSGGEDGGPRRALKSEFLVRENRKYYLDLKENQR 155
Query: 476 GTFMRI 481
G F+RI
Sbjct: 156 GRFLRI 161
>gi|390352952|ref|XP_001177704.2| PREDICTED: uncharacterized protein LOC752254 [Strongylocentrotus
purpuratus]
Length = 456
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 16/196 (8%)
Query: 12 LRTLMNRTNLITDVQEAQSAMATILNESK-----VGLDLEGMDLG-VDGKVSLVSLALQN 65
+ ++++T +I V++ + IL++S+ +GLD EG+ LG G ++LV ++ +
Sbjct: 235 FKDVLSQTQIIDYVEDCNRVLDPILDQSRRETVVIGLDCEGVGLGRAGGCLTLVQISTWD 294
Query: 66 GKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
GK F+FD + P L+ + L ++LE + ILKVIH DA L F ++LKNV+DT
Sbjct: 295 GKAFLFDAFKNPQLLKGNSSLKKILEHNSILKVIHDCKSDAYSLYHGFGVKLKNVFDTSI 354
Query: 125 AFTAL--QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPL 182
A + QL+ R + +G L + ++ + E P WK RPL
Sbjct: 355 AMRTIMEQLNRNR-------SYQVGFKALCELLGEGASHKDDDFVKKMLETPDFWKIRPL 407
Query: 183 TSDMLLYAAADVESLL 198
T +M+ YAA+D L+
Sbjct: 408 TEEMIYYAASDALCLV 423
>gi|190339240|gb|AAI62478.1| Si:dkey-202n14.1 [Danio rerio]
gi|190339246|gb|AAI62482.1| Si:dkey-202n14.1 [Danio rerio]
Length = 314
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 51/226 (22%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ----NTP 373
NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L + + +TP
Sbjct: 54 NKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYLGDFIEHYAQLGPSTP 113
Query: 374 RHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ------------- 412
+ + +KSE L+++ R+Y+LDLK+N R RF+ I Q
Sbjct: 114 EQIAQSSGGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPGGFGAGG 173
Query: 413 -----LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE------DGA----PEGN 457
+ G +IA PAQ L ++ L ++ ++E GA PEG
Sbjct: 174 GVPGGGMQSG---QTIALPAQGLIEFRDALAKLIDDYGGDDEELVGGGCSGAYGELPEGT 230
Query: 458 YMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
+ ++KRFFF+V N G F+R+SE I+ P K + G
Sbjct: 231 SITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWSKFG 276
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 19/126 (15%)
Query: 373 PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPA 427
P R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A
Sbjct: 35 PFQRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSMSVAAEF 94
Query: 428 QD-LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGK 475
+D LG I + L S PE EDG P + ++ N++++ ++ +N +
Sbjct: 95 RDYLGDFIEHYAQLG--PSTPEQIAQSSGGEDGGPRRALKSEFLVRENRKYYLDLKENQR 152
Query: 476 GTFMRI 481
G F+RI
Sbjct: 153 GRFLRI 158
>gi|166796259|gb|AAI59268.1| LOC564840 protein [Danio rerio]
gi|189441666|gb|AAI67481.1| Si:dkey-202n14.1 protein [Danio rerio]
Length = 305
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 51/226 (22%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ----NTP 373
NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L + + +TP
Sbjct: 45 NKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYLGDFIEHYAQLGPSTP 104
Query: 374 RHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ------------- 412
+ + +KSE L+++ R+Y+LDLK+N R RF+ I Q
Sbjct: 105 EQIAQSSGGEDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPGGFGAGG 164
Query: 413 -----LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE------DGA----PEGN 457
+ G +IA PAQ L ++ L ++ ++E GA PEG
Sbjct: 165 GVPGGGMQSG---QTIALPAQGLIEFRDALAKLIDDYGGDDEELVGGGCSGAYGELPEGT 221
Query: 458 YMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
+ ++KRFFF+V N G F+R+SE I+ P K + G
Sbjct: 222 SITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWSKFG 267
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 19/126 (15%)
Query: 373 PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPA 427
P R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A
Sbjct: 26 PFQRDQETQELASKRLDIQNKRFYLDVKQNSKGRFIKIAEVGAGGSKSRLTLSMSVAAEF 85
Query: 428 QD-LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGK 475
+D LG I + L S PE EDG P + ++ N++++ ++ +N +
Sbjct: 86 RDYLGDFIEHYAQLG--PSTPEQIAQSSGGEDGGPRRALKSEFLVRENRKYYLDLKENQR 143
Query: 476 GTFMRI 481
G F+RI
Sbjct: 144 GRFLRI 149
>gi|301619863|ref|XP_002939307.1| PREDICTED: purine-rich element-binding protein gamma-like [Xenopus
(Silurana) tropicalis]
Length = 324
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 67/244 (27%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLN--------- 363
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L
Sbjct: 45 KRFYLDVKQSARGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 104
Query: 364 ALLTAH----------QNTPRHRYRD-------------THTI-KSEVLIKDTRRYFLDL 399
L ++H ++ PR R TH++ K+E + +D R+Y+LDL
Sbjct: 105 GLRSSHAQRSEHGSDKEHEPRRRPHPSSPSGSVGSEEPMTHSVLKTEYIERDNRKYYLDL 164
Query: 400 KDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----SD 439
K+N R RF+ I Q + G G+ +I PAQ + ++ LI D
Sbjct: 165 KENQRGRFLRIRQTMTRGPGMIGYFGQSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEGD 224
Query: 440 LQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVL 491
+++ E+ PEG R +NKRF+F+V N G F+R+SE I+ P KV
Sbjct: 225 IEERRGGNEEPPELPEGTSFRVDNKRFYFDVGSNRYGIFLRVSEVRPPYRNTITVPYKVW 284
Query: 492 TNIG 495
T G
Sbjct: 285 TRFG 288
>gi|405970018|gb|EKC34956.1| Exonuclease 3'-5' domain-containing protein 1 [Crassostrea gigas]
Length = 210
Score = 99.4 bits (246), Expect = 8e-18, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIM 80
++ + + ++ + +ES + +D EG+ LGV+G ++L+ + +G +++FDV +
Sbjct: 8 IVVETSRCRQIVSILSSESVLAVDCEGIALGVEGPMTLLQICTYSGDVYLFDVQENRELF 67
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
+G L VLESD ILKVIH D+ L F + L+NV+DTQ A T L+ + RLL
Sbjct: 68 SEGHLKIVLESDEILKVIHACSYDSAALYHQFGVTLQNVFDTQVADTVLEEHNERLLVSS 127
Query: 141 LVPHTIGLNDLLKFYKISP--NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
L L +L + Y S +++K+ ++ +E W RPLT +M A DV +L+
Sbjct: 128 L-----DLQELCQKYSSSKKVSDYKEQLKYSKKEG-EFWAKRPLTDEMKSVAVGDVRALI 181
Query: 199 ALFHRMTKEYALKQNRLLLDNL 220
K + + + L+ N+
Sbjct: 182 PEVFETQKRLSEQASSDLVSNI 203
>gi|405975308|gb|EKC39882.1| Exonuclease 3'-5' domain-containing protein 1 [Crassostrea gigas]
Length = 403
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 110/214 (51%), Gaps = 15/214 (7%)
Query: 19 TNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPL 78
+I + + ++ + ES + +D EG+ LGV+G ++L+ + +G +++FDV
Sbjct: 13 VEIIVETSRCRHVVSILSRESVLAVDCEGIALGVEGPMTLLQICTNSGDVYLFDVQENRE 72
Query: 79 IMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
+ +G L VLES+ ILKVIH D+ L F + L+NV+DTQ A T L+ + RLL
Sbjct: 73 LFSEGHLKIVLESNEILKVIHACPYDSAALYHQFGVTLQNVFDTQVADTVLEEHNGRLLV 132
Query: 139 QDLVPHTIGLNDLLKFYKISP--NNFKKNIQNLY-RENPHIWKTRPLTSDMLLYAAADVE 195
L L L + Y S +++K+ ++ Y +++ W R LT +M A DV
Sbjct: 133 SSL-----DLQGLCQKYSSSKKVSDYKEQLKIQYSKKDGEFWAKRSLTDEMKSVAEGDVR 187
Query: 196 SLLALFHRMTKEYALKQNRLLLDNLIYETLFNHV 229
+L+ E KQ R++L++ + E V
Sbjct: 188 ALIP-------EVFEKQKRIILNSGLQEKFRERV 214
>gi|395850117|ref|XP_003797645.1| PREDICTED: transcriptional activator protein Pur-beta [Otolemur
garnettii]
Length = 360
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 48/239 (20%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 67 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 126
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V RD L + + ++P +KSE L+++ R+Y+LDLK+N
Sbjct: 127 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKEN 186
Query: 403 GRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 187 QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGG 243
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+DE PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 244 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 301
>gi|390352954|ref|XP_001198019.2| PREDICTED: uncharacterized protein LOC762429 [Strongylocentrotus
purpuratus]
Length = 468
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 12 LRTLMNRTNLITDVQEAQSAMATILNESK-----VGLDLEGMDLG-VDGKVSLVSLALQN 65
+ ++++T +I V++ + IL++S +GLD EG+ LG G ++LV ++ +
Sbjct: 238 FKDVLSQTEIIDSVEDCNRVLDPILDQSTRQTVVIGLDCEGVRLGTAKGCLTLVQISTWD 297
Query: 66 GKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
GK F+FD + P L+ + L ++LE + ILKVIH D GL F ++LKNV+DT
Sbjct: 298 GKAFLFDAFKNPQLLKGNSSLKKILEHNSILKVIHDCKSDTYGLHHGFGVKLKNVFDTSI 357
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A + R S + +G L + + + E P WK RPLT
Sbjct: 358 AMRTIMEQVNRYRS-----YRVGFKALCELLGEGATHKDDDFVKKMLETPDFWKIRPLTE 412
Query: 185 DMLLYAAADVESLL 198
+M+ YAA+D L+
Sbjct: 413 EMIYYAASDALCLI 426
>gi|66811680|ref|XP_640019.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|60468043|gb|EAL66053.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 390
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDV--YSCPLIMFDGKLHEV 88
A+ I E +GLD+E +++G G +SLV ++ NG+I++FD+ + F L EV
Sbjct: 177 AIHEIKKEKLIGLDIEAIEMGKKGDISLVQISTPNGRIYLFDIIKMGANVTPFKYGLKEV 236
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL 148
LES +ILKV+H D+ L + + L +VYD Q A +Q + + ++ G
Sbjct: 237 LESVKILKVVHDCRRDSEILFHRYQVALAHVYDVQIAHALVQ----KKIQGNIPIRRYGF 292
Query: 149 NDLLKFY---KISP--NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
N+L+ Y K S + K ++ + P +W RPL D + YA+ D LL +++
Sbjct: 293 NELIDLYTSRKYSEICIDIKFKVKQQFENQPEVWAKRPLPKDFIDYASLDAACLLPIYYH 352
Query: 204 M 204
+
Sbjct: 353 I 353
>gi|331028833|ref|NP_001193561.1| transcriptional activator protein Pur-beta [Bos taurus]
gi|296488379|tpg|DAA30492.1| TPA: purine-rich element binding protein B-like [Bos taurus]
Length = 304
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 53/252 (21%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 18 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 77
Query: 354 VVGHLRDHLNALLTAHQ----NTPRH---------RYRDTHTIKSEVLIKDTRRYFLDLK 400
V RD+L + + ++P +KSE L+++ R+Y+LDLK
Sbjct: 78 VAAEFRDYLGDFIEHYAQLGPSSPEQVAAAAGAEEGGGPRRALKSEFLVRENRKYYLDLK 137
Query: 401 DNGRARFVTISQ------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPE 448
+N R RF+ I Q L G +IA PAQ L ++ L ++ +
Sbjct: 138 ENQRGRFLRIRQTVNRGGGGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGGED 194
Query: 449 DE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE-------- 483
DE PEG + ++KRFFF+V N G F+R+SE
Sbjct: 195 DELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNA 254
Query: 484 ISTPSKVLTNIG 495
I+ P K G
Sbjct: 255 ITVPFKAWGKFG 266
>gi|357614807|gb|EHJ69283.1| transcriptional activator protein Pur-alpha [Danaus plexippus]
Length = 216
Score = 98.2 bits (243), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 21/148 (14%)
Query: 352 MSVVGHLRDHLNALLTAHQ--------NTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNG 403
MS RDHL+A + N P D +KSE+++KD RRY+LDLK+N
Sbjct: 1 MSTAAEFRDHLSAFSDFYSSLGPPNPDNVP-----DDGKLKSEMMLKDNRRYYLDLKENS 55
Query: 404 RARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGA-----PEGNY 458
R RF+ +SQ GG + +A PAQ + ++DL + +DG PEG +
Sbjct: 56 RGRFLRVSQTQTRGGPRAQVALPAQGMIEFRDALTDLLDDFG---SDDGGFKGELPEGRH 112
Query: 459 MRCNNKRFFFNVSKNGKGTFMRISEIST 486
+R +NK F+F++ +N +G +M++SE+ +
Sbjct: 113 LRVDNKNFYFDIGQNNRGVYMKVSEVKS 140
>gi|397467163|ref|XP_003805296.1| PREDICTED: transcriptional activator protein Pur-beta [Pan
paniscus]
Length = 333
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 47/235 (20%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 40 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 99
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V RD L + + ++P +KSE L+++ R+Y+LDLK+N
Sbjct: 100 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKEN 159
Query: 403 GRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 160 QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGG 216
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
+DE PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 217 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 271
>gi|344242329|gb|EGV98432.1| Purine-rich element-binding protein gamma [Cricetulus griseus]
Length = 292
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 57/245 (23%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AHQ 370
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 15 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 74
Query: 371 NTPRHRY------------RDTHT-----------------IKSEVLIKDTRRYFLDLKD 401
HR R H+ +K++ + +D R+Y+LDLK+
Sbjct: 75 GLKGHRQEHGQSKEQVSRKRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKYYLDLKE 134
Query: 402 NGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLISDLQQ---- 442
N R RF+ I Q + G G+ +I PAQ + ++ LI D +
Sbjct: 135 NQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIE 194
Query: 443 EHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNIK 501
E C +DE PEG R +NKRF+F+V N G F+++SE+ P + + K+ +
Sbjct: 195 ERRCGDDEPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTITVPFKAWTR 254
Query: 502 TDTNI 506
N
Sbjct: 255 FGENF 259
>gi|41054521|ref|NP_956841.1| transcriptional activator protein Pur-beta [Danio rerio]
gi|82187358|sp|Q6PHK6.3|PURB_DANRE RecName: Full=Transcriptional activator protein Pur-beta; AltName:
Full=Purine-rich element-binding protein B
gi|34194064|gb|AAH56517.1| Purine-rich element binding protein B [Danio rerio]
Length = 297
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 47/228 (20%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L
Sbjct: 23 EQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYL 82
Query: 363 NALLTAH------------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
+ + Q++ +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 83 GDFIEHYAQLGPSSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 142
Query: 411 SQLL------------------PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
Q + G +IA PAQ L ++ L ++ EDE+
Sbjct: 143 RQTVNRGPGFGVGGGGGPGGGVQAG---QTIALPAQGLIEFRDALAKLIDDYGG-EDEEL 198
Query: 453 A------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+ PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 199 SGGPGAAGGYGELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEV-KPS 245
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 21 QREQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRD 80
Query: 430 -LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGKGT 477
LG I + L S PE +DG P + ++ N++++ ++ +N +G
Sbjct: 81 YLGDFIEHYAQLGP--SSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGR 138
Query: 478 FMRI 481
F+RI
Sbjct: 139 FLRI 142
>gi|213515016|ref|NP_001133539.1| transcriptional activator protein Pur-beta [Salmo salar]
gi|209154406|gb|ACI33435.1| Transcriptional activator protein Pur-beta [Salmo salar]
Length = 304
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 41/228 (17%)
Query: 298 KESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGH 357
+ S E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV
Sbjct: 29 QHSQREQETQELASKRLDIQNKRFYLDVKQNNKGRFIKIAEVGAGGSKSRLTLSMSVAAE 88
Query: 358 LRDHLNALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRA 405
RD+L + + ++P + + +KSE L+++ R+Y+LDLK+N R
Sbjct: 89 FRDYLGDFIEHYAQLGPSSPEQIAQSSVGEDGGPRRALKSEFLVRENRKYYLDLKENQRG 148
Query: 406 RFVTISQ---------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE 450
RF+ I Q + G +IA PAQ L ++ ++ ++E
Sbjct: 149 RFLRIRQTVNRGPGFGVGGPGGGMQAG---QTIALPAQGLIEFRDALAKHIDDYGGDDEE 205
Query: 451 ----------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 206 LAGGTAAGAYGELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEV-KPS 252
>gi|115896423|ref|XP_795972.2| PREDICTED: uncharacterized protein LOC591312 [Strongylocentrotus
purpuratus]
Length = 976
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 16/196 (8%)
Query: 12 LRTLMNRTNLITDVQEAQSAMATILNESK-----VGLDLEGMDLGVD-GKVSLVSLALQN 65
+ ++++T +I +++ + + IL++ + +GLD EG++LG + G+++LV ++ +
Sbjct: 701 FQDVVSQTQIIDSLEDCKQVLDPILDKCRRETVVIGLDCEGVELGREKGRLTLVQISTWD 760
Query: 66 GKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
GK F+FD + P L+ + L + LE D ILKVIH D L +F ++LKNV+DT
Sbjct: 761 GKAFLFDAFKNPQLLKGNSSLKKTLEHDSILKVIHACNSDTYSLYHDFGVKLKNVFDTSI 820
Query: 125 A-FTAL-QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPL 182
A FT + QL+ P+ IG L + + ++ + + E WK RPL
Sbjct: 821 AMFTIMEQLNRNH-------PYQIGYKALCELLGEAASHKDDDFKKKMIETEDFWKIRPL 873
Query: 183 TSDMLLYAAADVESLL 198
T +M+ YAA+D L+
Sbjct: 874 TEEMIYYAASDTLCLV 889
>gi|195995897|ref|XP_002107817.1| hypothetical protein TRIADDRAFT_51711 [Trichoplax adhaerens]
gi|190588593|gb|EDV28615.1| hypothetical protein TRIADDRAFT_51711 [Trichoplax adhaerens]
Length = 280
Score = 97.4 bits (241), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 32/197 (16%)
Query: 319 KKFYFDIKQSKSTKFIKISE--------------------------VNMDQTRNQIHISM 352
K+FY D+KQ++ +FIK++E V + +R+QI M
Sbjct: 44 KRFYLDVKQNRGGRFIKVAERYRQEETEKKTSWKSGSSSTVHTIDRVASNGSRSQITFGM 103
Query: 353 SVVGHLRDHLNALLTAHQNTP---RHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVT 409
++ +RD L+ + + R+ ++ +KS V+ K + Y+LDLK+N R +F+
Sbjct: 104 TLGKDIRDQLDDFADFYASLDPGNRNEEGESGNLKSGVIRKGEKWYYLDLKENPRGKFLR 163
Query: 410 ISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCP--EDEDGAPEGNYMRCNNKRFF 467
ISQ+L GG+ + IA PAQ + + +SDL E E E + + +R +KR +
Sbjct: 164 ISQVLRYGGR-NQIALPAQGIAEMKDALSDLLDEFGVEDVETEQTSLDSQMLRAESKRIY 222
Query: 468 FNVSKNGKGTFMRISEI 484
F+V KN +GTF+RI+E+
Sbjct: 223 FDVGKNNRGTFLRITEV 239
>gi|45768686|gb|AAH67670.1| Purb protein, partial [Danio rerio]
Length = 296
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 47/228 (20%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L
Sbjct: 22 EQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYL 81
Query: 363 NALLTAH------------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
+ + Q++ +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 82 GDFIEHYAQLGPSSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 141
Query: 411 SQLL------------------PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
Q + G +IA PAQ L ++ L ++ EDE+
Sbjct: 142 RQTVNRGPGFGVGGGGGPGGGVQAG---QTIALPAQGLIEFRDALAKLIDDYGG-EDEEL 197
Query: 453 A------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+ PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 198 SGGPGAAGGYGELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEV-KPS 244
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 20 QREQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRD 79
Query: 430 -LGPIIGLISDLQQEHSCPE-------DEDGAP----EGNYMRCNNKRFFFNVSKNGKGT 477
LG I + L S PE +DG P + ++ N++++ ++ +N +G
Sbjct: 80 YLGDFIEHYAQLGP--SSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGR 137
Query: 478 FMRI 481
F+RI
Sbjct: 138 FLRI 141
>gi|426356152|ref|XP_004045455.1| PREDICTED: transcriptional activator protein Pur-beta [Gorilla
gorilla gorilla]
Length = 312
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 47/235 (20%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 19 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 78
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V RD L + + ++P +KSE L+++ R+Y+LDLK+N
Sbjct: 79 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKEN 138
Query: 403 GRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 139 QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGG 195
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
+DE PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 196 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 250
>gi|296209217|ref|XP_002751440.1| PREDICTED: transcriptional activator protein Pur-beta [Callithrix
jacchus]
gi|297680504|ref|XP_002818028.1| PREDICTED: transcriptional activator protein Pur-beta [Pongo
abelii]
gi|332865140|ref|XP_003318463.1| PREDICTED: transcriptional activator protein Pur-beta isoform 1
[Pan troglodytes]
gi|410058900|ref|XP_003951050.1| PREDICTED: transcriptional activator protein Pur-beta [Pan
troglodytes]
gi|387542500|gb|AFJ71877.1| transcriptional activator protein Pur-beta [Macaca mulatta]
gi|410220564|gb|JAA07501.1| purine-rich element binding protein B [Pan troglodytes]
gi|410349201|gb|JAA41204.1| purine-rich element binding protein B [Pan troglodytes]
Length = 312
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 47/235 (20%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 19 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 78
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V RD L + + ++P +KSE L+++ R+Y+LDLK+N
Sbjct: 79 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKEN 138
Query: 403 GRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 139 QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGG 195
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
+DE PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 196 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 250
>gi|194226457|ref|XP_001495103.2| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Equus caballus]
Length = 348
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 51 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 110
Query: 353 SVVGHLRDHLNALLT--------------AHQNTPRHRYRDTHT---------------- 382
SV L+D L + H P R R H+
Sbjct: 111 SVAAELKDCLGDFIEHYAHLGLKGHRPEHGHGKEPGSRRRQKHSAPSPPVSVGSEEHPHS 170
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 171 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMLRGTGMIGYFGHSLGQEQTIVLPAQGM 230
Query: 431 ----GPIIGLISD-----LQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D +++ +D+ PEG R +NKRF+F+V N G F+++
Sbjct: 231 IEFRDALVQLIEDYGEGEMEERRGGDDDQLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 290
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 291 SEVRPPYRNTITVPFKAWTRFGENF 315
>gi|403278602|ref|XP_003930886.1| PREDICTED: transcriptional activator protein Pur-beta [Saimiri
boliviensis boliviensis]
Length = 362
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 55/248 (22%)
Query: 300 SANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLR 359
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V R
Sbjct: 75 GGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFR 134
Query: 360 DHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDNGRARFV 408
D L + + ++P +KSE L+++ R+Y+LDLK+N R RF+
Sbjct: 135 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFL 194
Query: 409 TISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE-- 450
I Q L G +IA PAQ L ++ L ++ +DE
Sbjct: 195 RIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGGEDDELA 251
Query: 451 ---------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTP 487
PEG + ++KRFFF+V N G F+R+SE I+ P
Sbjct: 252 GGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNAITVP 311
Query: 488 SKVLTNIG 495
K G
Sbjct: 312 FKAWGKFG 319
>gi|380798485|gb|AFE71118.1| transcriptional activator protein Pur-beta, partial [Macaca
mulatta]
Length = 296
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 59/241 (24%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 3 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 62
Query: 354 VVGHLRDHLN-----------------ALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYF 396
V RD L A PR +KSE L+++ R+Y+
Sbjct: 63 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR------RALKSEFLVRENRKYY 116
Query: 397 LDLKDNGRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDL 440
LDLK+N R RF+ I Q L G +IA PAQ L ++ L
Sbjct: 117 LDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKL 173
Query: 441 QQEHSCPEDEDGA-----------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
++ +DE PEG + ++KRFFF+V N G F+R+SE
Sbjct: 174 IDDYGGEDDELAGGTGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSE 233
Query: 484 I 484
+
Sbjct: 234 V 234
>gi|15147219|ref|NP_150093.1| transcriptional activator protein Pur-beta [Homo sapiens]
gi|74732688|sp|Q96QR8.3|PURB_HUMAN RecName: Full=Transcriptional activator protein Pur-beta; AltName:
Full=Purine-rich element-binding protein B
gi|14906268|gb|AAK72462.1| Pur-beta [Homo sapiens]
gi|41350063|gb|AAS00366.1| unknown [Homo sapiens]
gi|51094493|gb|EAL23749.1| purine-rich element binding protein B [Homo sapiens]
gi|75516758|gb|AAI01736.1| Purine-rich element binding protein B [Homo sapiens]
gi|75517862|gb|AAI01738.1| Purine-rich element binding protein B [Homo sapiens]
gi|119581477|gb|EAW61073.1| purine-rich element binding protein B [Homo sapiens]
gi|208968709|dbj|BAG74193.1| purine-rich element binding protein B [synthetic construct]
Length = 312
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 47/235 (20%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 19 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 78
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V RD L + + ++P +KSE L+++ R+Y+LDLK+N
Sbjct: 79 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKEN 138
Query: 403 GRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 139 QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGG 195
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
+DE PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 196 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 250
>gi|348513933|ref|XP_003444495.1| PREDICTED: transcriptional activator protein Pur-beta-like
[Oreochromis niloticus]
Length = 305
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 55/249 (22%)
Query: 295 HKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
H ++E +E + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV
Sbjct: 26 HYQREPETQE----LASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSV 81
Query: 355 VGHLRDHLNALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDN 402
RD+L + + +TP + + +KSE L+++ R+Y+LDLK+N
Sbjct: 82 AAEFRDYLGDFIEHYAQLGPSTPEQIAQSSGGDDTGPRRALKSEFLVRENRKYYLDLKEN 141
Query: 403 GRARFVTISQ------------------LLPVGGKLSSIAFPAQDL----GPIIGLISDL 440
R RF+ I Q L G +IA PAQ L + LI D
Sbjct: 142 QRGRFLRIRQTVNRGPGFGVGVGGIPGAGLQAG---QTIALPAQGLIEFRDALAKLIDDY 198
Query: 441 QQEHSCPEDEDGA------PEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------IST 486
+ GA PEG + ++KRFFF+V N G F+R+SE I+
Sbjct: 199 GGDEEELAGGGGAGGYSELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITI 258
Query: 487 PSKVLTNIG 495
P K + G
Sbjct: 259 PFKAWSKFG 267
>gi|221110543|ref|XP_002167629.1| PREDICTED: transcriptional activator protein Pur-alpha-like [Hydra
magnipapillata]
Length = 246
Score = 96.3 bits (238), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 3/199 (1%)
Query: 291 NRMFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHI 350
+R ++ S N + + + +K + +K++Y D+K++ +FIK+ E + T+N++
Sbjct: 19 DRRDESQERSGNRDDNDELASKSLRIQSKRYYVDVKENSRGRFIKLVEGLPNGTKNRLSF 78
Query: 351 SMSVVGHLRDHLNALLTAHQNTPRHRYRDT---HTIKSEVLIKDTRRYFLDLKDNGRARF 407
MSVV +RD L+ + R+ + S+ + R+ + DLK+N R F
Sbjct: 79 PMSVVPEVRDKLSKFAEFYSKLDTEAEREVPEDGKLHSDDIRSAQRKIYFDLKENKRGIF 138
Query: 408 VTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFF 467
+ +S G +IA PAQ + + ++S+ +E+ E+ PE MR KRF+
Sbjct: 139 LRVSCTASYGSSRHTIALPAQGIEEVRDVLSEFIEEYGQDEEPHETPEFQEMRVERKRFY 198
Query: 468 FNVSKNGKGTFMRISEIST 486
F+ N +G F+RISE+++
Sbjct: 199 FDSGSNDRGAFLRISEVTS 217
>gi|82186781|sp|Q6PAC9.3|PURBA_XENLA RecName: Full=Transcriptional activator protein Pur-beta-A;
AltName: Full=Purine-rich element-binding protein B-A
Length = 323
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 45/229 (19%)
Query: 301 ANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRD 360
+ E+ + + TK NK+FY D+KQ+ +FIKI+EV +++++ +SM V RD
Sbjct: 25 SREQETQELATKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMGVAAEFRD 84
Query: 361 HLNALL----------------TAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGR 404
+L + + ++ +KSE L+++ R+Y+LDLK+N R
Sbjct: 85 YLGDFIEHYAQLGPSSPEQIAQASGEDGAGGPGGPRRALKSEFLVRENRKYYLDLKENQR 144
Query: 405 ARFVTISQLL-------------PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDED 451
RF+ I Q + +IA PAQ L ++ L ++ +DE
Sbjct: 145 GRFLRIRQTINRGPGFSGGAGGGAGLQSGQTIALPAQGLIEFRDALAKLIDDYGGEDDEG 204
Query: 452 GA----------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 205 VGLGGAGGGGGGGMYGELPEGTSITVDSKRFFFDVGSNKYGVFLRVSEV 253
>gi|395847380|ref|XP_003796356.1| PREDICTED: purine-rich element-binding protein gamma [Otolemur
garnettii]
Length = 348
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 51 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 110
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 111 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQSSRRRQKHSAPSPPVSVGSEEHPHS 170
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 171 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 230
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 231 IEFRDALVQLIEDYGEGDIEERRGGDDDPPELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 290
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 291 SEVRPPYRNTITVPFKAWTRFGENF 315
>gi|109730895|gb|AAI16407.1| Purine-rich element binding protein G [Mus musculus]
gi|148703463|gb|EDL35410.1| mCG50689 [Mus musculus]
Length = 350
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
+S I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 53 QSGGTSEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 112
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRY------------RDTHT---------------- 382
SV L+D L + AH HR R H+
Sbjct: 113 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGQSKEQVSRRRQKHSAPSPPVSVGSEEHPHS 172
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 173 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 232
Query: 431 ----GPIIGLISDLQQ----EHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D + E C +D+ PEG R +NKRF+F+V N G F+++
Sbjct: 233 IEFRDALVQLIEDYGEGDIEERRCGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 292
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 293 SEVRPPYRNTITVPFKAWTRFGENF 317
>gi|221219166|gb|ACM08244.1| Transcriptional activator protein Pur-beta [Salmo salar]
Length = 310
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 42/206 (20%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAH-------- 369
NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L + +
Sbjct: 45 NKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYLGDFIEHYAQLGPSSP 104
Query: 370 ----QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL----------- 414
Q++ +KSE L+++ R+Y+LDLK+N R RF+ I Q L
Sbjct: 105 EQIAQSSGGDDSGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTLNRGPGFGVGSG 164
Query: 415 ------PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE----------DGAPEGNY 458
G +IA PAQ L ++ ++ ++E PEG
Sbjct: 165 GVPGGMQSG---QTIALPAQGLIEFRDALAKHIDDYGGDDEELAGGGGAGGYSELPEGTS 221
Query: 459 MRCNNKRFFFNVSKNGKGTFMRISEI 484
+ ++KRFFF+V N G FMR+SE+
Sbjct: 222 IMVDSKRFFFDVGSNKYGVFMRVSEV 247
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 28 QRDQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRD 87
Query: 430 -LGPII------GLISDLQQEHSCPEDEDG---APEGNYMRCNNKRFFFNVSKNGKGTFM 479
LG I G S Q S D+ G A + ++ N++++ ++ +N +G F+
Sbjct: 88 YLGDFIEHYAQLGPSSPEQIAQSSGGDDSGPRRALKSEFLVRENRKYYLDLKENQRGRFL 147
Query: 480 RI 481
RI
Sbjct: 148 RI 149
>gi|432951912|ref|XP_004084921.1| PREDICTED: transcriptional activator protein Pur-beta-like [Oryzias
latipes]
Length = 306
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 48/231 (20%)
Query: 295 HKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
H ++E +E + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV
Sbjct: 26 HYQREPETQE----LASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSV 81
Query: 355 VGHLRDHLNALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDN 402
RD+L + + +TP + + +KSE L+++ R+Y+LDLK+N
Sbjct: 82 AAEFRDYLGDFIEHYAQLGPSTPEQIAQSSGGDDTGPRRALKSEFLVRENRKYYLDLKEN 141
Query: 403 GRARFVTISQ------------------LLPVGGKLSSIAFPAQDL----GPIIGLISDL 440
R RF+ I Q L G +IA PAQ L + LI D
Sbjct: 142 QRGRFLRIRQTVNRGPGFGVGVGGIPGAGLQAG---QTIALPAQGLIEFRDALAKLIDDY 198
Query: 441 QQEHSCPEDEDGA-------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
+ G PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 199 GGDDEDLAGGGGGAGAYSELPEGTSIMVDSKRFFFDVGSNKYGVFLRVSEV 249
>gi|6755252|ref|NP_035351.1| transcriptional activator protein Pur-beta [Mus musculus]
gi|81870411|sp|O35295.3|PURB_MOUSE RecName: Full=Transcriptional activator protein Pur-beta; AltName:
Full=Purine-rich element-binding protein B; AltName:
Full=Vascular actin single-stranded DNA-binding factor 2
p44 component
gi|2460119|gb|AAB71859.1| vascular actin single-stranded DNA-binding factor 2 p44 component
[Mus musculus]
gi|148708650|gb|EDL40597.1| purine rich element binding protein B [Mus musculus]
gi|162317808|gb|AAI56318.1| Purine rich element binding protein B [synthetic construct]
Length = 324
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 59/232 (25%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD L
Sbjct: 40 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSL 99
Query: 363 N-----------------ALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRA 405
A PR +KSE L+++ R+Y+LDLK+N R
Sbjct: 100 GDFIEHYAQLGPSSPEQLAAGAEEGGGPR------RALKSEFLVRENRKYYLDLKENQRG 153
Query: 406 RFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPED 449
RF+ I Q L G +IA PAQ L ++ L ++ ED
Sbjct: 154 RFLRIRQTVNRGGGGFGGGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGGDED 210
Query: 450 E-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
E PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 211 ELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 262
>gi|345781563|ref|XP_003432144.1| PREDICTED: purine-rich element-binding protein gamma [Canis lupus
familiaris]
Length = 347
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKDQASRRRQKHAAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ ED PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDEDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|22779918|ref|NP_690034.1| purine-rich element-binding protein gamma isoform a [Mus musculus]
gi|81866971|sp|Q8R4E6.1|PURG_MOUSE RecName: Full=Purine-rich element-binding protein gamma
gi|19224222|gb|AAL86451.1|AF479673_1 Pur-gamma A-form [Mus musculus]
Length = 350
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
+S I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 53 QSGGTSEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 112
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRY------------RDTHT---------------- 382
SV L+D L + AH HR R H+
Sbjct: 113 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGQSKEQVSRRRQKHSAPSPPVSVGSEEHPHS 172
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 173 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQDQTIVLPAQGM 232
Query: 431 ----GPIIGLISDLQQ----EHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D + E C +D+ PEG R +NKRF+F+V N G F+++
Sbjct: 233 IEFRDALVQLIEDYGEGDIEERRCGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 292
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 293 SEVRPPYRNTITVPFKAWTRFGENF 317
>gi|390352964|ref|XP_003728008.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 271
Score = 95.5 bits (236), Expect = 1e-16, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 13/172 (7%)
Query: 41 VGLDLEGMDLGVDGK-VSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVI 98
+GLD EG++LG G ++LV ++ +GK F+FD + P L+ + L ++LE + ILKVI
Sbjct: 107 IGLDCEGVNLGERGGCLTLVQISTWDGKAFLFDAFKNPQLLKGNSSLKKILEHNSILKVI 166
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL--QLSDPRLLSQDLVPHTIGLNDLLKFY- 155
H D L + F + LKNV+DT A T L QL+ R + IG LL+
Sbjct: 167 HDCKCDTHALHNEFGVILKNVFDTSIAMTTLMEQLNRYR-------TYRIGFKALLELLG 219
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMTK 206
+ +P+ I+ R P IWK+RPLT +M+ YAA+D L+ +L+ ++++
Sbjct: 220 EGAPHRDDDAIKRKMRHTPDIWKSRPLTEEMIYYAASDALCLVPSLYLKLSR 271
>gi|348560062|ref|XP_003465833.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional activator protein
Pur-beta-like [Cavia porcellus]
Length = 383
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 58/231 (25%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD L
Sbjct: 100 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSL 159
Query: 363 N-----------------ALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRA 405
A PR +KSE L+++ R+Y+LDLK+N R
Sbjct: 160 GDFIEHYAQLGPSSPEQLAAGAEEGGGPR------RALKSEFLVRENRKYYLDLKENQRG 213
Query: 406 RFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPED 449
RF+ I Q L G +IA PAQ L ++ L ++ +D
Sbjct: 214 RFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGAEDD 270
Query: 450 E----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
E PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 271 ELSGGPGGGGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 321
>gi|449283475|gb|EMC90110.1| Purine-rich element-binding protein gamma, partial [Columba livia]
Length = 281
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 60/248 (24%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AH- 369
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 24 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 83
Query: 370 --QNTPRHRY------------RDTHT-----------------IKSEVLIKDTRRYFLD 398
+ P HR+ R H +K+E + +D R+Y+LD
Sbjct: 84 GLKGGPGHRHEHSDDKEQHPRRRQQHPPPSPPASVGSEEHAHSVLKTEYIERDNRKYYLD 143
Query: 399 LKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----S 438
LK+N R RF+ I Q + G G+ +I PAQ + ++ LI
Sbjct: 144 LKENQRGRFLRIRQTVSRGPGVMGYFGHGLGQEQTIVLPAQGMIEFRDALVQLIEEYGEG 203
Query: 439 DLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D++ +D PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 204 DIEDRRGGGDDPPELPEGTSFRVDNKRFYFDVGSNRYGIFLKVSEVRPPYRNTITVPYKA 263
Query: 499 NIKTDTNI 506
+ N
Sbjct: 264 WTRFGENF 271
>gi|147899952|ref|NP_001079178.1| transcriptional activator protein Pur-beta-B [Xenopus laevis]
gi|82177241|sp|Q8AVS4.3|PURBB_XENLA RecName: Full=Transcriptional activator protein Pur-beta-B;
AltName: Full=Purine-rich element-binding protein B-B
gi|27371301|gb|AAH41305.1| Purb-A protein [Xenopus laevis]
Length = 328
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 55/239 (23%)
Query: 301 ANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRD 360
+ E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SM+V RD
Sbjct: 25 SREQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMAVAAEFRD 84
Query: 361 HLNALL----------------TAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGR 404
+L + + ++ +KSE L+++ R+Y+LDLK+N R
Sbjct: 85 YLGDFIEHYAQLGPSSPEQIAQASGEDGAGGPGGPRRALKSEFLVRENRKYYLDLKENQR 144
Query: 405 ARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPE 448
RF+ I Q L G +IA PAQ L ++ L ++ +
Sbjct: 145 GRFLRIRQTINRGPGFSGGTGGGPGLQSG---QTIALPAQGLIEFRDALAKLIDDYGGED 201
Query: 449 DEDGA-------------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
DE PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 202 DEGMGLGSGASGGGAGGGGMYGELPEGTSITVDSKRFFFDVGSNKYGVFLRVSEV-KPS 259
>gi|301605942|ref|XP_002932584.1| PREDICTED: transcriptional activator protein Pur-beta-B-like
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 47/234 (20%)
Query: 301 ANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRD 360
+ E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SM+V RD
Sbjct: 26 SREQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMAVAAEFRD 85
Query: 361 HLNALLTAHQ----NTPRHRYRDTHT------------IKSEVLIKDTRRYFLDLKDNGR 404
+L + + ++P + + +KSE L+++ R+Y+LDLK+N R
Sbjct: 86 YLGDFIEHYAQLGPSSPEQIAQSSGEDGAGGPGGPRRALKSEFLVRENRKYYLDLKENQR 145
Query: 405 ARFVTISQLL-------------PVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDED 451
RF+ I Q + +IA PAQ L ++ L ++ +DE
Sbjct: 146 GRFLRIRQTINRGPGFSGGAGGGAGLQSGQTIALPAQGLIEFRDALAKLIDDYGGEDDEG 205
Query: 452 GA-----------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 206 VGLGPGGAGGGAGGMYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 258
>gi|348578312|ref|XP_003474927.1| PREDICTED: purine-rich element-binding protein gamma-like [Cavia
porcellus]
Length = 347
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHPAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|441650266|ref|XP_004093129.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional activator protein
Pur-beta [Nomascus leucogenys]
Length = 312
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 55/254 (21%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 19 FQPASRGGGEHETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGACGSKSRLTLSMA 78
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V LRD L + + ++P +KSE ++++ R+Y+LDLK+N
Sbjct: 79 VAAELRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFMVRENRKYYLDLKEN 138
Query: 403 GRARFVTISQ----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 139 QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGG 195
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE------ 483
+DE PEG + ++KRFFF+V N G F+R+SE
Sbjct: 196 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVKPSYR 255
Query: 484 --ISTPSKVLTNIG 495
I+ P K G
Sbjct: 256 NAITVPFKAWGKFG 269
>gi|351715432|gb|EHB18351.1| Purine-rich element-binding protein gamma [Heterocephalus glaber]
Length = 355
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 58 QAGGATEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 117
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 118 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 177
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 178 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGQEQTIVLPAQGM 237
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 238 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 297
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 298 SEVRPPYRNTITVPFKAWTRFGENF 322
>gi|332240838|ref|XP_003269594.1| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Nomascus leucogenys]
Length = 347
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRLEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|149047690|gb|EDM00360.1| transcription factor Pur-beta [Rattus norvegicus]
Length = 317
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 55/245 (22%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD L
Sbjct: 33 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSL 92
Query: 363 NALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDNGRARFVTIS 411
+ + ++P +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 93 GDFIEFYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIR 152
Query: 412 Q----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE----- 450
Q L G +IA PAQ L ++ L ++ +DE
Sbjct: 153 QTVNRGGGGFGGGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGGEDDELAGGP 209
Query: 451 ------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKV 490
PEG + ++KRFFF+V N G F+R+SE I+ P K
Sbjct: 210 GGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNAITVPFKA 269
Query: 491 LTNIG 495
G
Sbjct: 270 WGKFG 274
>gi|7019507|ref|NP_037489.1| purine-rich element-binding protein gamma isoform A [Homo sapiens]
gi|55630490|ref|XP_528103.1| PREDICTED: purine-rich element-binding protein gamma isoform 2 [Pan
troglodytes]
gi|390473662|ref|XP_003734635.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Callithrix jacchus]
gi|397521448|ref|XP_003830807.1| PREDICTED: purine-rich element-binding protein gamma [Pan paniscus]
gi|426359282|ref|XP_004046909.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Gorilla gorilla gorilla]
gi|74720969|sp|Q9UJV8.1|PURG_HUMAN RecName: Full=Purine-rich element-binding protein gamma
gi|6110620|gb|AAF03900.1|AF195513_1 Pur-gamma A-form [Homo sapiens]
gi|76825047|gb|AAI06709.1| Purine-rich element binding protein G [Homo sapiens]
gi|119583832|gb|EAW63428.1| purine-rich element binding protein G, isoform CRA_a [Homo sapiens]
gi|384946704|gb|AFI36957.1| purine-rich element-binding protein gamma isoform A [Macaca
mulatta]
Length = 347
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|403294328|ref|XP_003938144.1| PREDICTED: purine-rich element-binding protein gamma [Saimiri
boliviensis boliviensis]
Length = 347
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPISVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|62945366|ref|NP_001017503.1| transcriptional activator protein Pur-beta [Rattus norvegicus]
gi|81863556|sp|Q68A21.3|PURB_RAT RecName: Full=Transcriptional activator protein Pur-beta; AltName:
Full=Purine-rich element-binding protein B
gi|51775933|dbj|BAD38899.1| transcription factor Pur-beta [Rattus norvegicus]
Length = 315
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 55/245 (22%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD L
Sbjct: 31 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSL 90
Query: 363 NALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDNGRARFVTIS 411
+ + ++P +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 91 GDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIR 150
Query: 412 Q----------------LLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDE----- 450
Q L G +IA PAQ L ++ L ++ +DE
Sbjct: 151 QTVNRGGGGFGGGPGPGGLQSG---QTIALPAQGLIEFRDALAKLIDDYGGEDDELAGGP 207
Query: 451 ------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKV 490
PEG + ++KRFFF+V N G F+R+SE I+ P K
Sbjct: 208 GGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNAITVPFKA 267
Query: 491 LTNIG 495
G
Sbjct: 268 WGKFG 272
>gi|427793215|gb|JAA62059.1| Putative transcriptional regulator of the pur family
single-stranded-dna-binding protein, partial
[Rhipicephalus pulchellus]
Length = 508
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 13/163 (7%)
Query: 294 FHKEKESANEERIEVID-------TKMYQCFNKKFYFDIKQSKSTKFIKISEV---NMDQ 343
+ +E + A+E +++ +KM + +K+FY D+KQ++ +FIK++EV +
Sbjct: 346 YSREDDGASENGGQLMSQGEQELASKMLEIQSKRFYLDVKQNRQGRFIKVAEVQQVGVVG 405
Query: 344 TRNQIHISMSVVGHLRDHLNAL--LTAHQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLK 400
++++ ++MS RDHL + L A P + +KSE +IKD RRY+LDLK
Sbjct: 406 RKSRLLLAMSTAAEFRDHLTSFSELYASLGPPNPENLPEDGKLKSEKMIKDNRRYYLDLK 465
Query: 401 DNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQE 443
+N R RF+ +SQ + GG S IA PAQ + ++DL +E
Sbjct: 466 ENSRGRFLRVSQTIARGGPRSQIAIPAQGMIEFRDALTDLLKE 508
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 368 AHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG--GKLSSIAF 425
A +N + + + S++L ++R++LD+K N + RF+ ++++ VG G+ S +
Sbjct: 353 ASENGGQLMSQGEQELASKMLEIQSKRFYLDVKQNRQGRFIKVAEVQQVGVVGRKSRLLL 412
Query: 426 PAQDLGPIIGLISDLQQEHSC-----PED--EDGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
++ + ++ PE+ EDG + M +N+R++ ++ +N +G F
Sbjct: 413 AMSTAAEFRDHLTSFSELYASLGPPNPENLPEDGKLKSEKMIKDNRRYYLDLKENSRGRF 472
Query: 479 MRISE 483
+R+S+
Sbjct: 473 LRVSQ 477
>gi|291237029|ref|XP_002738446.1| PREDICTED: purine-rich element binding protein A-like [Saccoglossus
kowalevskii]
Length = 357
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 336 ISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRYRDTHT---IKSEVLIKDT 392
+++V ++++ ++MS RDH+ + + + +KSE++ KD
Sbjct: 146 LNQVGAGGNKSRLTLAMSTAAEFRDHMTEFIEHYAQLGPPNPDNPPEDGRLKSEMITKDN 205
Query: 393 RRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
RRY++DLK+N R RF+ +SQ + G + + IA PAQ L +++L E +DG
Sbjct: 206 RRYYMDLKENNRGRFLRVSQTINRGPR-THIALPAQGLVEFRDALTELLDEFGT---DDG 261
Query: 453 A------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGI 496
A PEG ++R NK F+F++ N +G +MRISE+ S+ T+I I
Sbjct: 262 AEAQPELPEGRHIRVENKNFYFDIGSNHRGIYMRISEVQPRSQYRTSITI 311
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 767 IKVANIIIKVTKKTNNIITKMKMTNVVPPS-YRASITIPERSWDRFIETFHQTCDLYK-- 823
I+V N +N+ M+++ V P S YR SITIPE+SW RF + F CD K
Sbjct: 274 IRVENKNFYFDIGSNHRGIYMRISEVQPRSQYRTSITIPEKSWSRFRDIFSDYCDKMKET 333
Query: 824 SAECSTSRPESQCD 837
S + PE++ +
Sbjct: 334 SNRDGEAEPEAEVE 347
>gi|355697851|gb|EHH28399.1| Purine-rich element-binding protein gamma, partial [Macaca mulatta]
gi|355779619|gb|EHH64095.1| Purine-rich element-binding protein gamma, partial [Macaca
fascicularis]
Length = 334
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 37 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 96
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 97 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 156
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 157 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 216
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 217 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 276
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 277 SEVRPPYRNTITVPFKAWTRFGENF 301
>gi|344281662|ref|XP_003412597.1| PREDICTED: purine-rich element-binding protein gamma-like
[Loxodonta africana]
Length = 347
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGATEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEQGHGKEQSSRRRQKHAAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPVELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|300796897|ref|NP_001178483.1| purine-rich element-binding protein gamma [Rattus norvegicus]
gi|149057894|gb|EDM09137.1| rCG43146 [Rattus norvegicus]
Length = 351
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
+S I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 54 QSGGASEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 113
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRY------------RDTHT---------------- 382
SV L+D L + AH HR R H+
Sbjct: 114 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGQSKEQVSRRRQKHSAPSPPVSVGSEEHPHS 173
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 174 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 233
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 234 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 293
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 294 SEVRPPYRNTITVPFKAWTRFGENF 318
>gi|410956139|ref|XP_003984702.1| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Felis catus]
Length = 345
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQASRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 290 SEVRPPYRNTITVPFKAWTRFGENF 314
>gi|291383595|ref|XP_002708475.1| PREDICTED: purine-rich element binding protein G-like [Oryctolagus
cuniculus]
Length = 323
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 57/253 (22%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 52 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 111
Query: 353 SVVGHLRDHLNALLT--------------AHQNTPRHRYRDTHT---------------- 382
SV L+D L + H P R R H
Sbjct: 112 SVAAELKDCLGDFIEHYAHLGLKGHRPEHGHGKEPGSRRRQKHAAPSPPVSVGSEEHPHS 171
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 172 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGAGMIGYFGHSLGQEQTIVLPAQGM 231
Query: 431 ----GPIIGLISDLQQ---EHSCPEDED--GAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D + E D+D PEG R +NKRF+F+V N G F+++
Sbjct: 232 IEFRDALVQLIEDYGEGDIEERRGGDDDLLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 291
Query: 482 SEISTPSKVLTNI 494
SE++ K NI
Sbjct: 292 SELTNYPKSRENI 304
>gi|431902276|gb|ELK08777.1| Purine-rich element-binding protein gamma [Pteropus alecto]
Length = 347
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 57/245 (23%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AHQ 370
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 70 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 129
Query: 371 NTPRHRYRDTHT-----------------------------IKSEVLIKDTRRYFLDLKD 401
HR H+ +K++ + +D R+Y+LDLK+
Sbjct: 130 GLKGHRQEHGHSREQGSRRRQRHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKYYLDLKE 189
Query: 402 NGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----SDLQ 441
N R RF+ I Q + G G+ +I PAQ + ++ LI D++
Sbjct: 190 NQRGRFLRIRQTMIRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIE 249
Query: 442 QEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNIK 501
+ +D PEG R +NKRF+F+V N G F+++SE+ P + + K+ +
Sbjct: 250 ERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTITVPFKAWTR 309
Query: 502 TDTNI 506
N
Sbjct: 310 FGENF 314
>gi|47221521|emb|CAG08183.1| unnamed protein product [Tetraodon nigroviridis]
Length = 289
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 47/226 (20%)
Query: 295 HKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
H +++S +E + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV
Sbjct: 27 HYQRDSETQE----LASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSV 82
Query: 355 VGHLRDHLNALLTAH------------QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDN 402
RD+L + + Q++ +KSE L+++ R+Y+LDLK+N
Sbjct: 83 AAEFRDYLGDFIEHYAQLGPSSPEQIAQSSGGDDTGPRRALKSEFLVRENRKYYLDLKEN 142
Query: 403 GRARFVTISQL------------------LPVGGKLSSIAFPAQDLGPIIGLISDLQQEH 444
R RF+ I Q L G +IA PAQ L ++ L ++
Sbjct: 143 QRGRFLRIRQTVNRGPGFGVGVGGFPGAGLQAG---QTIALPAQGLIEFRDALAKLIDDY 199
Query: 445 SCPEDE----------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMR 480
E++ PEG + ++KRFFF+V N G F+R
Sbjct: 200 GGDEEDLAGGGGAGGYSELPEGTSITVDSKRFFFDVGSNKYGVFLR 245
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 17/125 (13%)
Query: 374 RHRYRDTHT--IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFP 426
+H RD+ T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A
Sbjct: 26 QHYQRDSETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAE 85
Query: 427 AQD-LGPII------GLISDLQQEHSCPEDEDG---APEGNYMRCNNKRFFFNVSKNGKG 476
+D LG I G S Q S D+ G A + ++ N++++ ++ +N +G
Sbjct: 86 FRDYLGDFIEHYAQLGPSSPEQIAQSSGGDDTGPRRALKSEFLVRENRKYYLDLKENQRG 145
Query: 477 TFMRI 481
F+RI
Sbjct: 146 RFLRI 150
>gi|363733274|ref|XP_426295.3| PREDICTED: purine-rich element-binding protein gamma [Gallus
gallus]
Length = 339
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 58/246 (23%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AH- 369
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 61 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 120
Query: 370 --QNTPRH----------RYRDTH-----------------TIKSEVLIKDTRRYFLDLK 400
+ RH R R H +K+E + +D R+Y+LDLK
Sbjct: 121 GLKGGHRHEHSNGKEQHSRQRQQHPPPSPPGSVGSEEHPHSVLKTEYIERDNRKYYLDLK 180
Query: 401 DNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----SDL 440
+N R RF+ I Q + G G+ +I PAQ + ++ LI D+
Sbjct: 181 ENQRGRFLRIRQTMSRGPGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEEYGEGDM 240
Query: 441 QQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNI 500
+ ++ PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 241 EDRRGGGDEPPELPEGTSFRVDNKRFYFDVGSNRYGIFLKVSEVRPPYRNTITVPYKAWT 300
Query: 501 KTDTNI 506
+ N
Sbjct: 301 RFGENF 306
>gi|335302757|ref|XP_003359541.1| PREDICTED: purine-rich element-binding protein gamma isoform 1 [Sus
scrofa]
Length = 349
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 61/267 (22%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 52 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 111
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 112 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 171
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 172 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGQEQTIVLPAQGM 231
Query: 431 ----GPIIGLISDLQQEHSCPEDEDGA-------PEGNYMRCNNKRFFFNVSKNGKGTFM 479
++ LI D + ED G PEG R +NKRF+F+V N G F+
Sbjct: 232 IEFRDALVQLIEDYGE--GDIEDRRGGDDDPVELPEGTSFRVDNKRFYFDVGSNKYGIFL 289
Query: 480 RISEISTPSKVLTNIGIKSNIKTDTNI 506
++SE+ P + + K+ + N
Sbjct: 290 KVSEVRPPYRNTITVPFKAWTRFGENF 316
>gi|402877946|ref|XP_003902669.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Papio anubis]
Length = 416
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 119 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 178
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 179 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 238
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 239 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 298
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 299 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 358
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 359 SEVRPPYRNTITVPFKAWTRFGENF 383
>gi|297299197|ref|XP_002808522.1| PREDICTED: LOW QUALITY PROTEIN: purine-rich element-binding protein
gamma-like [Macaca mulatta]
Length = 450
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 153 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 212
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 213 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 272
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 273 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 332
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 333 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 392
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 393 SEVRPPYRNTITVPFKAWTRFGENF 417
>gi|426256362|ref|XP_004021809.1| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Ovis aries]
Length = 351
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 54 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 113
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 114 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 173
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G +I PAQ +
Sbjct: 174 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGLEQTIVLPAQGM 233
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 234 IEFRDALVQLIEDYGEGDIEERRGGDDDPVELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 293
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 294 SEVRPPYRNTITVPFKAWTRFGENF 318
>gi|296472390|tpg|DAA14505.1| TPA: purine-rich element binding protein G-like [Bos taurus]
Length = 350
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 53 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 112
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 113 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 172
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G +I PAQ +
Sbjct: 173 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGLEQTIVLPAQGM 232
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 233 IEFRDALVQLIEDYGEGDIEERRGGDDDPMELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 292
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 293 SEVRPPYRNTITVPFKAWTRFGENF 317
>gi|440794844|gb|ELR15989.1| R3H domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 441
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 30 SAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCPLIMF-DGKLHE 87
+A + + ++ + LD EG+DLG G + LV +A ++G+ F+FDV F +G L
Sbjct: 4 AAESILAHDHPLALDCEGVDLGDKSGSLCLVQIATRSGRYFLFDVTKGGSRHFSEGGLRR 63
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
VLE +LKV H DA L + + L +V+DTQ + L + + +G
Sbjct: 64 VLEDVHVLKVGHDLRADASALFAEHGVLLNHVFDTQVGHSVLTVGKQ---------NQVG 114
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
LN +LK Y S N KK ++ + + W RPLT +M+ YA+ D
Sbjct: 115 LNPMLKLYANSQNELKKAVKKAWTRDRLYWTRRPLTEEMVGYASLD 160
>gi|440907538|gb|ELR57677.1| Purine-rich element-binding protein gamma, partial [Bos grunniens
mutus]
Length = 335
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 57/265 (21%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 38 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 97
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 98 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 157
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G +I PAQ +
Sbjct: 158 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGLEQTIVLPAQGM 217
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 218 IEFRDALVQLIEDYGEGDIEERRGGDDDPVELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 277
Query: 482 SEISTPSKVLTNIGIKSNIKTDTNI 506
SE+ P + + K+ + N
Sbjct: 278 SEVRPPYRNTITVPFKAWTRFGENF 302
>gi|330843627|ref|XP_003293751.1| hypothetical protein DICPUDRAFT_42473 [Dictyostelium purpureum]
gi|325075888|gb|EGC29725.1| hypothetical protein DICPUDRAFT_42473 [Dictyostelium purpureum]
Length = 368
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 10/211 (4%)
Query: 13 RTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLAL-QNGKIFIF 71
+T + +I D+ + Q A+ I E ++GLD+E +++G G++SL+ ++ N +++F
Sbjct: 138 QTSFDNVYMIDDIAKIQFAINQIKKEKQIGLDIEAVEMGKRGEMSLIQISTPSNASVYLF 197
Query: 72 DVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
DV + I+F L EVLES ILKV+H D+ L + + L +VYD Q A +
Sbjct: 198 DVLTLGDIIFKLGLKEVLESKVILKVVHDCRRDSEILYHKYQVLLTHVYDIQIAHAIIL- 256
Query: 132 SDPRLLSQDLVPHTIGLNDLLKFYKISPN-----NFKKNIQNLYRENPHIWKTRPLTSDM 186
+ + +L G N+L Y + K + L+ E+ IW RP+ +
Sbjct: 257 ---KKIDGNLPIRRFGFNELTHIYTSKEYSKYCVDIKFKTKQLFDEDNKIWAKRPIPKLL 313
Query: 187 LLYAAADVESLLALFHRMTKEYALKQNRLLL 217
L YA D LL ++ +T + +R L
Sbjct: 314 LDYACLDAAILLPIYRTITPKLQSGSDRRFL 344
>gi|405978809|gb|EKC43171.1| Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform [Crassostrea gigas]
Length = 1039
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 21/219 (9%)
Query: 9 NNLLR----TLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQ 64
++LLR + ++ +IT+V + + + E + + EG+ LG +G ++L +
Sbjct: 585 DDLLRPSSPAVYHQKEVITEVPRCRQLVHVLQRECIISVAGEGVALGREGPLTLFLVGTF 644
Query: 65 NGKIFIFDVYSCPLI---MFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVY 120
GK++ FD L+ +FD G L +LE+ ++LKV + L + F +RL+NV+
Sbjct: 645 YGKVYAFDC----LVNNELFDKGGLRLLLENTKVLKVAFSCCFLSAALYTQFAVRLRNVF 700
Query: 121 DTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNF--KKNIQNLY-RENPHIW 177
DTQ A + R L +P + L D+ + Y S NN+ + +++++Y R W
Sbjct: 701 DTQIAHLVI-----RELEGQKLPERLTLFDICQCYSGSGNNYGWRTDVKDMYLRRIGDYW 755
Query: 178 KTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLL 216
RPLT +ML +AA DV S + +R E+ L+++RLL
Sbjct: 756 SQRPLTCEMLEFAADDVMSFIPEVYRRQSEF-LEEHRLL 793
>gi|322791965|gb|EFZ16094.1| hypothetical protein SINV_12878 [Solenopsis invicta]
Length = 135
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 70/114 (61%), Gaps = 12/114 (10%)
Query: 379 DTHTIKSEVLIKDTRRYFLDLKDNGRARFV----TISQLLPVGGKLSSIAFPAQDLGPII 434
D +KSE+++KD RRY+LDLK+N R RF+ +SQ + GG + IA PAQ +
Sbjct: 9 DDGKLKSEMMVKDNRRYYLDLKENSRGRFLRVSHPVSQTITRGGPRTQIAIPAQGMIEFR 68
Query: 435 GLISDLQQEHSCPEDEDGA-----PEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
++DL +E +DG PEG YMR ++K F+F++ +N +G +MRISE
Sbjct: 69 DALTDLLEEFGT---DDGGFKGDLPEGRYMRVDSKNFYFDIGQNNRGIYMRISE 119
>gi|326918446|ref|XP_003205499.1| PREDICTED: purine-rich element-binding protein gamma-like
[Meleagris gallopavo]
Length = 336
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 58/246 (23%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AH- 369
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 58 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 117
Query: 370 --QNTPRH----------RYRDTHT-----------------IKSEVLIKDTRRYFLDLK 400
++ RH R R H +K+E + +D R+Y+LDLK
Sbjct: 118 GLKSGHRHEHSNGKEQHSRQRQQHPPPSPSGSVGSEEHPHSVLKTEYIERDNRKYYLDLK 177
Query: 401 DNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----SDL 440
+N R RF+ I Q + G G+ +I PAQ + ++ LI D+
Sbjct: 178 ENQRGRFLRIRQTMSRGPGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEEYGEGDM 237
Query: 441 QQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNI 500
++ PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 238 DDRRGGGDEPPELPEGTSFRVDNKRFYFDVGSNRYGIFLKVSEVRPPYRNTITVPYKAWT 297
Query: 501 KTDTNI 506
+ N
Sbjct: 298 RFGENF 303
>gi|327279912|ref|XP_003224699.1| PREDICTED: purine-rich element-binding protein gamma-like [Anolis
carolinensis]
Length = 339
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 60/248 (24%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AH- 369
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 59 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVASELKDCLGDFIEHYAHL 118
Query: 370 -----------------QNTPRHRYRDT-------------HTI-KSEVLIKDTRRYFLD 398
Q++ R ++ H++ K+E + +D R+Y+LD
Sbjct: 119 GLKGSQTHRNDHANGKEQDSRRRQHHHPPSPPASVGSEEHLHSVLKTEYIERDNRKYYLD 178
Query: 399 LKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----S 438
LK+N R RF+ I Q L G G+ +I PAQ + ++ LI
Sbjct: 179 LKENQRGRFLRIRQTLIRGPGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEEYGEG 238
Query: 439 DLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D+++ S ++ PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 239 DIEERRSGGDEPPELPEGTSFRVDNKRFYFDVGSNRYGIFLKVSEVRPPYRNTITVPYKA 298
Query: 499 NIKTDTNI 506
+ N
Sbjct: 299 WTRFGENF 306
>gi|449499573|ref|XP_004186237.1| PREDICTED: LOW QUALITY PROTEIN: purine-rich element-binding protein
gamma [Taeniopygia guttata]
Length = 336
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 60/248 (24%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLN--------- 363
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L
Sbjct: 56 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 115
Query: 364 ALLTAHQNTPRH--------RYRDTHTIKS-----------------EVLIKDTRRYFLD 398
L H + H R R H+ S E + +D R+Y+LD
Sbjct: 116 GLKGGHGHRHEHSNDKEQHPRRRPQHSPPSPPVSVGSEEPPHSVLXTEYIERDNRKYYLD 175
Query: 399 LKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL----GPIIGLI-----S 438
LK+N R RF+ I Q + G G+ +I PAQ + ++ LI
Sbjct: 176 LKENQRGRFLRIRQTMSRGPGMMGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEEYGEG 235
Query: 439 DLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
D++ ++ PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 236 DIEDRRGGGDEPPELPEGTSFRVDNKRFYFDVGSNRYGIFLKVSEVRPPYRNTITVPYKA 295
Query: 499 NIKTDTNI 506
+ N
Sbjct: 296 WTRFGENF 303
>gi|431892591|gb|ELK03024.1| Transcriptional activator protein Pur-alpha [Pteropus alecto]
Length = 306
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 352 MSVVGHLRDHLNAL--------------LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFL 397
M+V RD+L L Q+ PR +KSE L+++ R+Y++
Sbjct: 1 MAVAAEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRR------ALKSEFLVRENRKYYM 54
Query: 398 DLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
DLK+N R RF+ I Q + G L S IA PAQ L ++ L ++ E+
Sbjct: 55 DLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAE 114
Query: 453 APEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
PEG + +NKRFFF+V N G FMR+SE I+ P KV G
Sbjct: 115 LPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFG 165
>gi|444713134|gb|ELW54042.1| Transcriptional activator protein Pur-alpha [Tupaia chinensis]
Length = 219
Score = 89.0 bits (219), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 352 MSVVGHLRDHLNAL--------------LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFL 397
MSV RD+L L Q+ PR +KSE L+++ R+Y++
Sbjct: 1 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRR------ALKSEFLVRENRKYYM 54
Query: 398 DLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
DLK+N R RF+ I Q + G L S IA PAQ L ++ L ++ E+
Sbjct: 55 DLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAE 114
Query: 453 APEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
PEG + +NKRFFF+V N G FMR+SE I+ P KV G
Sbjct: 115 LPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFG 165
>gi|440792694|gb|ELR13902.1| sporulation proteinrelated, putative [Acanthamoeba castellanii str.
Neff]
Length = 786
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 35 ILNESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMF-DGKLHEVLESD 92
+ ++ + LD EG++LG G + LV +A ++G+ F+FDV +F +G L VLE
Sbjct: 204 LTHDHPLALDCEGVNLGDKGGSLCLVQIATKSGRCFLFDVEQAGSRLFSEGGLQRVLEDV 263
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL-SDPRLLSQDLVPHTIGLNDL 151
+LKV H DA L + + L +++DTQ + L L +P+ +GLN +
Sbjct: 264 HVLKVGHDLRADAAALFAQHGVFLNHIFDTQVGHSMLTLRKEPQ----------VGLNAM 313
Query: 152 LKFYK-ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
L+ Y + N K+ ++ + +P W RPL+ M YA DV LL F M E
Sbjct: 314 LRRYANRAQNQLKEVVKAEWTRDPLYWTRRPLSDQMTRYAHLDVAFLLKAFDSMAAE 370
>gi|149017236|gb|EDL76287.1| rCG49429 [Rattus norvegicus]
Length = 219
Score = 88.6 bits (218), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 352 MSVVGHLRDHLNAL--------------LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFL 397
MSV RD+L L Q+ PR +KSE L+++ R+Y++
Sbjct: 1 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRR------ALKSEFLVRENRKYYM 54
Query: 398 DLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
DLK+N R RF+ I Q + G L S IA PAQ L ++ L ++ E+
Sbjct: 55 DLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAE 114
Query: 453 APEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
PEG + +NKRFFF+V N G FMR+SE I+ P KV G
Sbjct: 115 LPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFG 165
>gi|326670971|ref|XP_697889.3| PREDICTED: purine-rich element-binding protein gamma [Danio rerio]
Length = 321
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 63/251 (25%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRN------QIHISMSVVGHLRDHLNALLTAHQN- 371
K+FY D+KQS +F+KI+EV + + R+ ++ +SMS+ LR L + + +
Sbjct: 45 KRFYLDVKQSTRGRFLKIAEVWIGRGRHDNIRKSKLTLSMSMAPDLRYCLGDFIDYYAHI 104
Query: 372 -----------------------TPRHRYRD-------------THTI-KSEVLIKDTRR 394
PR R TH + KSE + +D R+
Sbjct: 105 GLRGCQAAERRPEEQSNGQGRAPDPRRRAEQAASPNGSGASEEQTHRVLKSEFIERDNRK 164
Query: 395 YFLDLKDNGRARFVTISQLLPVG---------GKLSSIAFPAQDL-------GPIIGLIS 438
Y+LDLK+N R RF+ I Q + G G +I PAQ L +I
Sbjct: 165 YYLDLKENQRGRFLRIRQTVTRGHGSMGYYGQGIEQTIVLPAQGLIEFRDALSQLIDDYG 224
Query: 439 DLQQEHSCPEDEDGAPE---GNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIG 495
D + E +C + D +PE R +NKRF+F+V N G F++ISE+ P + +
Sbjct: 225 DDEPERACARNHDESPELPEAASFRVDNKRFYFDVGSNRFGVFLKISEVRQPYRNTITVP 284
Query: 496 IKSNIKTDTNI 506
+K+ + N
Sbjct: 285 LKAWARFGENF 295
>gi|338720945|ref|XP_003364276.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Equus caballus]
Length = 323
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 51 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 110
Query: 353 SVVGHLRDHLNALLT--------------AHQNTPRHRYRDTHT---------------- 382
SV L+D L + H P R R H+
Sbjct: 111 SVAAELKDCLGDFIEHYAHLGLKGHRPEHGHGKEPGSRRRQKHSAPSPPVSVGSEEHPHS 170
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 171 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMLRGTGMIGYFGHSLGQEQTIVLPAQGM 230
Query: 431 ----GPIIGLISD-----LQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D +++ +D+ PEG R +NKRF+F+V N G F+++
Sbjct: 231 IEFRDALVQLIEDYGEGEMEERRGGDDDQLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 290
Query: 482 S 482
+
Sbjct: 291 T 291
>gi|355691656|gb|EHH26841.1| hypothetical protein EGK_16911, partial [Macaca mulatta]
Length = 207
Score = 87.8 bits (216), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS--- 422
L Q+ PR +KSE L+++ R+Y++DLK+N R RF+ I Q + G L S
Sbjct: 17 LAQAQDEPRR------ALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQG 70
Query: 423 --IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMR 480
IA PAQ L ++ L ++ E+ PEG + +NKRFFF+V N G FMR
Sbjct: 71 QTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMR 130
Query: 481 ISE--------ISTPSKVLTNIG 495
+SE I+ P KV G
Sbjct: 131 VSEVKPTYRNSITVPYKVWAKFG 153
>gi|432090267|gb|ELK23700.1| Transcriptional activator protein Pur-alpha [Myotis davidii]
Length = 226
Score = 87.4 bits (215), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 352 MSVVGHLRDHLNAL--------------LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFL 397
MSV RD+L L Q+ PR +KSE L+++ R+Y++
Sbjct: 1 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRR------ALKSEFLVRENRKYYM 54
Query: 398 DLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDG 452
DLK+N R RF+ I Q + G L S IA PAQ L ++ L ++ E+
Sbjct: 55 DLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAE 114
Query: 453 APEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSKVLTNIG 495
PEG + +NKRFFF+V N G FMR+SE I+ P KV G
Sbjct: 115 LPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFG 165
>gi|301770915|ref|XP_002920869.1| PREDICTED: purine-rich element-binding protein gamma-like
[Ailuropoda melanoleuca]
Length = 322
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKDQASRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 289
Query: 482 SEIS 485
S S
Sbjct: 290 SNFS 293
>gi|348504289|ref|XP_003439694.1| PREDICTED: purine-rich element-binding protein gamma-like
[Oreochromis niloticus]
Length = 341
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 110/258 (42%), Gaps = 71/258 (27%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRN------QIHISMSVVGHLR------------- 359
K+FY D+KQS +F+KI+EV + + R+ ++ +SMS+ LR
Sbjct: 55 KRFYLDVKQSVRGRFLKIAEVWIGRGRHDNIRKSKLTLSMSMAPALRYCLGDFIDYYARI 114
Query: 360 ------------DHLNALLTAHQNTPRHRYRDTHT-----------------IKSEVLIK 390
DH N N R R ++ H +KSE + +
Sbjct: 115 GLRGGLAPPQVEDHSNNG-QGRGNDSRKRAQEHHANLSPTGSIVSDDHAHRVLKSEFIER 173
Query: 391 DTRRYFLDLKDNGRARFVTISQLLPVG---------GKLSSIAFPAQDLGPIIGLISDLQ 441
D R+YFLDLK+N R RF+ I Q + G G +I PAQ L +S L
Sbjct: 174 DNRKYFLDLKENQRGRFLRIRQTVSKGHGTMGYYGQGIEQTIVLPAQGLIEFRDALSQLI 233
Query: 442 QEHSCPEDEDGA-------------PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+++ E ED + PE R +NKRF+F+V N G F++ISE+ P
Sbjct: 234 EDYGDEESEDRSRAGSRNRSDNPELPEAASFRVDNKRFYFDVGSNRYGIFLKISEVRQPY 293
Query: 489 KVLTNIGIKSNIKTDTNI 506
+ + +K+ + N
Sbjct: 294 RNTITVPLKAWARFGENF 311
>gi|148287015|ref|NP_001091703.1| purine-rich element-binding protein gamma isoform b [Mus musculus]
gi|19224220|gb|AAL86450.1|AF479672_1 Pur-gamma B-form [Mus musculus]
Length = 325
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
+S I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 53 QSGGTSEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 112
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRY------------RDTHT---------------- 382
SV L+D L + AH HR R H+
Sbjct: 113 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGQSKEQVSRRRQKHSAPSPPVSVGSEEHPHS 172
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 173 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQDQTIVLPAQGM 232
Query: 431 ----GPIIGLISDLQ----QEHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D +E C +D+ PEG R +NKRF+F+V N G F+++
Sbjct: 233 IEFRDALVQLIEDYGEGDIEERRCGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 292
Query: 482 S 482
+
Sbjct: 293 T 293
>gi|126302985|ref|XP_001370377.1| PREDICTED: transcriptional activator protein Pur-beta-like
[Monodelphis domestica]
Length = 325
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 51/253 (20%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 33 FQPLSRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 92
Query: 354 VVGHLRDHLNALLTAHQ----NTPRH------------RYRDTHTIKSEVLIKDTRRYFL 397
V RD+L + + ++P +KSE L+++ R+Y+L
Sbjct: 93 VAAEFRDYLGDFIEHYAQLGPSSPEQIAAAAAAAGAEDGGGPRRALKSEFLVRENRKYYL 152
Query: 398 DLKDNGRARFVTISQLL--------------------PVGGKLSSIAFPAQD-------L 430
DLK+N R RF+ I Q + +IA PAQ L
Sbjct: 153 DLKENQRGRFLRIRQTINRGPGAGGGFGGGGGPGPGGGGLPSGQTIALPAQGLIEFRDAL 212
Query: 431 GPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE------- 483
+I E PEG + ++KRFFF+V N G F+R+SE
Sbjct: 213 AKLIDDYGGDDDELGGGPGYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRN 272
Query: 484 -ISTPSKVLTNIG 495
I+ P K G
Sbjct: 273 AITVPFKAWGKFG 285
>gi|452820227|gb|EME27272.1| 3'-5' exonuclease domain-containing protein / KH domain-containing
protein [Galdieria sulphuraria]
Length = 268
Score = 87.0 bits (214), Expect = 4e-14, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 11/216 (5%)
Query: 35 ILNES-----KVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
I+NE+ + +D EG++L DGK+ L+ ++ K FIFDV + +F E+L
Sbjct: 21 IINETLGVCDAIAVDCEGVNLSRDGKLCLLQVS-TGTKTFIFDVCALQKELFLTGFKEIL 79
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLN 149
ES+RILKV H D+ L + +RL+NV DTQ AF L+ + + ++ L I L
Sbjct: 80 ESERILKVFHDCRYDSDALWWLYGVRLRNVLDTQVAFRILR--EQQGYTRQLPVKFITLL 137
Query: 150 DLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ISP K+ +N + ++ + W RP+ D L+YAA DV+ LL + + +
Sbjct: 138 RRFVNQEISPQTLELKRTFKNRFSQDRNFWLRRPIPKDALVYAAYDVKKLLEIATNILRN 197
Query: 208 YA-LKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
+ + R++ ++ IY + ++ R +F Q
Sbjct: 198 LSEWNRKRVMDESEIYVMAYRDDEEGALKARMEFGQ 233
>gi|47210485|emb|CAF93392.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 112/259 (43%), Gaps = 66/259 (25%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLR 359
I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +SM+ LR
Sbjct: 1 IQELASKRVDVQKKRFYLDVKQSVRGRFLKIAEVWIGRGRYDSIRKSKLTLSMAAAPALR 60
Query: 360 -------DHL------NALLTAHQ-NTPRHR----------------YRDTHT---IKSE 386
DH A A Q + P R D H +KSE
Sbjct: 61 YCLGGFIDHYARIGLRGAAAAAPQLDEPESRRGAQEPRAARSPSGSGASDDHAHRVLKSE 120
Query: 387 VLIKDTRRYFLDLKDNGRARFVTISQLLPVG---------GKLSSIAFPAQDLGPIIGLI 437
++ +D R+YFLDLK+N R RF+ I Q + G G SI PAQ L +
Sbjct: 121 LIERDNRKYFLDLKENQRGRFLRIRQTVSRGPGSMGYYGQGAEQSIVLPAQGLIEFRDAL 180
Query: 438 SDLQQEHSCPE-DEDGA-----------------PEGNYMRCNNKRFFFNVSKNGKGTFM 479
S L + E DE G PE R +NKRF+F+V N G F+
Sbjct: 181 SQLIDNYGEDEADERGPAAAAAAAGRERDPQPALPEAASFRVDNKRFYFDVGSNRFGVFL 240
Query: 480 RISEISTPSKVLTNIGIKS 498
+ISE+ P + + +K+
Sbjct: 241 KISEVRQPYRNTITVPLKA 259
>gi|440796352|gb|ELR17461.1| 3'5' exonuclease domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 536
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 51/229 (22%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIM 80
+++ ++E + +A + + +D EG++L +G++ LV + ++ K+++ DV +
Sbjct: 164 IVSQIEECREMVAELTKLEVIAVDCEGVNLSREGELCLVQIGTES-KVYLVDVLEHGRAL 222
Query: 81 FD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
F+ G L +LES ++ KV+H GD+ + + + L+NV+DTQ A+ ++ R + Q
Sbjct: 223 FEEGGLRALLESTKVRKVLHDCRGDSDAMYHQYGVALQNVFDTQIAYAVIK----RQMGQ 278
Query: 140 DLVPHTIGLNDLLKFYKI--------------------------------SP-------- 159
P +GLN +L+ Y +P
Sbjct: 279 G-TPLPVGLNTVLRAYATPILETKAAQEQEKERAERKKQQQASGDKSAADAPFALDLVRR 337
Query: 160 ----NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N+FKK + E+P WKTRPLTS M+ YA+ DV L ++ +M
Sbjct: 338 IDAINSFKKEERLKMVEDPTYWKTRPLTSSMVGYASEDVMFLCLVYKQM 386
>gi|410956141|ref|XP_003984703.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Felis catus]
Length = 322
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQASRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 289
Query: 482 S 482
S
Sbjct: 290 S 290
>gi|225714474|gb|ACO13083.1| Transcriptional activator protein Pur-beta [Lepeophtheirus
salmonis]
gi|290562776|gb|ADD38783.1| Transcriptional activator protein Pur-beta [Lepeophtheirus
salmonis]
Length = 258
Score = 86.3 bits (212), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
FH A+E V+ T+ NK+FY D+K++ +FIKISE++ + RNQI ++M
Sbjct: 22 FHSGGRRADEG---VVATRAVCIENKRFYMDVKENARGRFIKISELSPEGRRNQIVLAMP 78
Query: 354 VVGHLRDHLNALLTAHQ-----NTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFV 408
+ H + L +++ + NT R + + SEV+ D +RY +DLK+N R RF+
Sbjct: 79 IAAHFQRVLKHMISEYAYLEPLNTERLILGE---LSSEVIHSDEKRYRVDLKENARGRFL 135
Query: 409 TISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEH-------------SCPEDEDGAPE 455
+S+ G IA PA + +SDL +EH P +
Sbjct: 136 KVSETFVQGKSRFQIAIPADGMAEFDEHLSDLIEEHGDLDEQTVEVAHQQAPLPSTTSSS 195
Query: 456 GNYMRCNNKRFFFNVSKNGKG 476
+ +NK + F+ KN G
Sbjct: 196 SRAISIDNKTYTFDCRKNPHG 216
Score = 46.2 bits (108), Expect = 0.074, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 376 RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIG 435
R D + + + + +R+++D+K+N R RF+ IS+L P G+ + I
Sbjct: 27 RRADEGVVATRAVCIENKRFYMDVKENARGRFIKISELSP-EGRRNQIVLAMPIAAHFQR 85
Query: 436 LISDLQQEHSCPEDED------GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
++ + E++ E + G + + KR+ ++ +N +G F+++SE K
Sbjct: 86 VLKHMISEYAYLEPLNTERLILGELSSEVIHSDEKRYRVDLKENARGRFLKVSETFVQGK 145
Query: 490 VLTNIGIKSN 499
I I ++
Sbjct: 146 SRFQIAIPAD 155
>gi|332240840|ref|XP_003269595.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Nomascus leucogenys]
Length = 322
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRLEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 289
Query: 482 S 482
+
Sbjct: 290 T 290
>gi|62865862|ref|NP_001015508.1| purine-rich element-binding protein gamma isoform B [Homo sapiens]
gi|390473664|ref|XP_002756973.2| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Callithrix jacchus]
gi|410041670|ref|XP_003951290.1| PREDICTED: purine-rich element-binding protein gamma [Pan
troglodytes]
gi|426359280|ref|XP_004046908.1| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Gorilla gorilla gorilla]
gi|18699019|gb|AAL77218.1| Pur-gamma B-form [Homo sapiens]
gi|119583833|gb|EAW63429.1| purine-rich element binding protein G, isoform CRA_b [Homo sapiens]
Length = 322
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 289
Query: 482 S 482
+
Sbjct: 290 T 290
>gi|354474957|ref|XP_003499696.1| PREDICTED: purine-rich element-binding protein gamma-like
[Cricetulus griseus]
Length = 439
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 167 QAGGASEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 226
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRY------------RDTHT---------------- 382
SV L+D L + AH HR R H+
Sbjct: 227 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGQSKEQVSRKRQKHSAPSPPVSVGSEEHPHS 286
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 287 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 346
Query: 431 ----GPIIGLISDLQ----QEHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D +E C +DE PEG R +NKRF+F+V N G F+++
Sbjct: 347 IEFRDALVQLIEDYGEGDIEERRCGDDEPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 406
Query: 482 S 482
+
Sbjct: 407 T 407
>gi|313232585|emb|CBY19255.1| unnamed protein product [Oikopleura dioica]
Length = 255
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 293 MFHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISM 352
M + + E N + E + +KM NK+FY D+K++ F+K++EV+ ++++ +SM
Sbjct: 1 MDNDQVEQGNGDTKE-LASKMVLIQNKRFYLDVKKNDRGMFVKVAEVSPGGNKSRLTLSM 59
Query: 353 SVVGHLRDHLNALLTAHQ----NTPRHRYRDTHT-IKSEVLIKDTRRYFLDLKDNGRARF 407
+ RD L + + + P + +K+E L +++RRYFLDLK+N R R+
Sbjct: 60 ATAAEFRDLLGDFIEHYAQLGPSDPAQPAEERQKPLKTERLHRESRRYFLDLKENNRGRY 119
Query: 408 VTISQLLPVGGKLSS--------IAFPAQDL----GPIIGLISDLQQEHSCPEDEDGAPE 455
+ I Q G+ + I PAQ + + GLI + Q ED+ P+
Sbjct: 120 LRIRQQTAYNGQGQAQNQGPPPQIVLPAQGMIEFRDTLTGLIDEYGQ---IEEDQFELPK 176
Query: 456 GNYM-RCNNKRFFFNVSKNGKGTFMRISE 483
+ + NK+FF + +N +G F+RI+E
Sbjct: 177 PHVIGDKRNKQFFLDAGQNQRGVFLRITE 205
>gi|355750242|gb|EHH54580.1| hypothetical protein EGM_15451, partial [Macaca fascicularis]
Length = 184
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 13/126 (10%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS-----IAFPAQDLGPIIGLI 437
+KSE L+++ R+Y+LDLK+N R RF+ I Q + G L S IA PAQ L +
Sbjct: 5 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 64
Query: 438 SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--------ISTPSK 489
+ L ++ E+ PEG + +NKRFFF+V N G FMR+SE I+ P K
Sbjct: 65 AKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYK 124
Query: 490 VLTNIG 495
V G
Sbjct: 125 VWAKFG 130
>gi|402589725|gb|EJW83656.1| transcriptional activator protein Pur-alpha [Wuchereria bancrofti]
Length = 270
Score = 85.1 bits (209), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 24/208 (11%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVN---MDQT------RNQIHISMSVVGHLRDH 361
+KM Q +K+FY D+KQ+ +FIK++EV+ +DQ ++++ +SM+ RDH
Sbjct: 21 SKMLQVQSKRFYVDVKQNNRGRFIKLAEVSSRKLDQQVGLGGRKSRLILSMNAAVAFRDH 80
Query: 362 LNALLT-----AHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFV--TISQLL 414
L+ + A + P + +KSE+++ ++RRY+L LK+N R R++ +
Sbjct: 81 LDKFVKFFDGLASGDEPI--VSENGQLKSEIIVHESRRYYLSLKENQRGRYLRVSQRVSR 138
Query: 415 PVGGKLSSIAFPAQDLGPIIGLISDLQQEHS---CPEDEDGA--PEGNYMRC-NNKRFFF 468
G IA PA + + +++L +++ E + PE ++R NNK F+F
Sbjct: 139 SSSGPRLQIALPAPGMTQLRDALNELIDKYAEGYLNESDTNVELPEPKHVRAENNKIFYF 198
Query: 469 NVSKNGKGTFMRISEISTPSKVLTNIGI 496
+V N +GTF+RISE+ S ++I +
Sbjct: 199 DVGHNERGTFVRISEVKQISGSRSSIAV 226
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQT---RNQIHISMSVVGHLRDHLNALLTAHQNTPR 374
++++Y +K+++ +++++S+ + R QI + + LRD LN L+ +
Sbjct: 114 SRRYYLSLKENQRGRYLRVSQRVSRSSSGPRLQIALPAPGMTQLRDALNELIDKYAEGYL 173
Query: 375 HRYRDTHTIKSE---VLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLG 431
+ DT+ E V ++ + ++ D+ N R FV IS++ + G SSIA P G
Sbjct: 174 NE-SDTNVELPEPKHVRAENNKIFYFDVGHNERGTFVRISEVKQISGSRSSIAVPMSSWG 232
Query: 432 PIIGLISDLQQE 443
++++LQ++
Sbjct: 233 AFRDVLAELQEK 244
Score = 41.6 bits (96), Expect = 1.7, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 278 VPLANAKLLNNPINRMFHKEKE---SANEERIEVIDTKMYQCFNKK-FYFDIKQSKSTKF 333
+P L + +N + K E + ++ +E+ + K + N K FYFD+ ++ F
Sbjct: 149 LPAPGMTQLRDALNELIDKYAEGYLNESDTNVELPEPKHVRAENNKIFYFDVGHNERGTF 208
Query: 334 IKISEV-NMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRYRDTHTIKSEVLIKDT 392
++ISEV + +R+ I + MS G RD L L T TIKS++ ++
Sbjct: 209 VRISEVKQISGSRSSIAVPMSSWGAFRDVLAELQEKMMATKGTENDTERTIKSDIKLEHN 268
Query: 393 R 393
+
Sbjct: 269 K 269
>gi|402877944|ref|XP_003902668.1| PREDICTED: purine-rich element-binding protein gamma isoform 1
[Papio anubis]
Length = 391
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 119 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 178
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 179 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 238
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 239 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 298
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 299 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 358
Query: 482 S 482
+
Sbjct: 359 T 359
>gi|297682642|ref|XP_002819023.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Pongo abelii]
Length = 391
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 119 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 178
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H+
Sbjct: 179 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHS 238
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 239 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTVMRGTGMIGYFGHSLGQEQTIVLPAQGM 298
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 299 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 358
Query: 482 S 482
+
Sbjct: 359 T 359
>gi|170050482|ref|XP_001861331.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872069|gb|EDS35452.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 708
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 15 LMNRTNLITDVQEAQSAMATIL-----NESKVGLDLEGMDLGVDGKVSLVSLALQNGKIF 69
++ T +I+ V+E+ IL +++ + D EG++LGV G+++++ L G+ F
Sbjct: 576 VLQNTRVISTVKESLFVTQAILKSAYEDQTVISFDCEGINLGVRGQITMIQLGTTRGEAF 635
Query: 70 IFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
IFDV +CP ++ G + +VLE+++++KVIH D+ L + F I L+NV+DTQ +
Sbjct: 636 IFDVATCPDMVPHGGIKQVLEAEKVIKVIHDCRNDSVNLYNQFQIMLRNVFDTQSS 691
>gi|335302759|ref|XP_003359542.1| PREDICTED: purine-rich element-binding protein gamma isoform 2 [Sus
scrofa]
Length = 324
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 61/243 (25%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 52 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 111
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 112 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 171
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 172 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGQEQTIVLPAQGM 231
Query: 431 ----GPIIGLISDLQQEHSCPEDEDGA-------PEGNYMRCNNKRFFFNVSKNGKGTFM 479
++ LI D + ED G PEG R +NKRF+F+V N G F+
Sbjct: 232 IEFRDALVQLIEDYGE--GDIEDRRGGDDDPVELPEGTSFRVDNKRFYFDVGSNKYGIFL 289
Query: 480 RIS 482
+++
Sbjct: 290 KLT 292
>gi|225713354|gb|ACO12523.1| Transcriptional activator protein Pur-beta [Lepeophtheirus
salmonis]
Length = 258
Score = 84.0 bits (206), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
FH A+E V+ T+ NK+FY D+K++ +FIKISE++ + RNQI ++M
Sbjct: 22 FHSGGRRADEG---VVATRAVCIENKRFYMDVKENARGRFIKISELSPEGRRNQIVLTMP 78
Query: 354 VVGHLRDHLNALLTAHQ-----NTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFV 408
+ H + L +++ + NT R + + SEV+ + +RY +DLK+N R RF+
Sbjct: 79 IAAHFQRVLKHMISEYAYLEPLNTERLILGE---LSSEVIHSNEKRYRVDLKENARGRFL 135
Query: 409 TISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEH 444
+S+ G IA PA + +SDL +EH
Sbjct: 136 KVSETFVQGKSRFQIAIPADGMAEFDEHLSDLIEEH 171
Score = 47.8 bits (112), Expect = 0.029, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 376 RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIG 435
R D + + + + +R+++D+K+N R RF+ IS+L P G+ + I
Sbjct: 27 RRADEGVVATRAVCIENKRFYMDVKENARGRFIKISELSP-EGRRNQIVLTMPIAAHFQR 85
Query: 436 LISDLQQEHSCPEDED------GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
++ + E++ E + G + N KR+ ++ +N +G F+++SE K
Sbjct: 86 VLKHMISEYAYLEPLNTERLILGELSSEVIHSNEKRYRVDLKENARGRFLKVSETFVQGK 145
Query: 490 VLTNIGIKSN 499
I I ++
Sbjct: 146 SRFQIAIPAD 155
>gi|426256364|ref|XP_004021810.1| PREDICTED: purine-rich element-binding protein gamma isoform 2
[Ovis aries]
Length = 326
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 54 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 113
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 114 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 173
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G +I PAQ +
Sbjct: 174 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGLEQTIVLPAQGM 233
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 234 IEFRDALVQLIEDYGEGDIEERRGGDDDPVELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 293
Query: 482 S 482
+
Sbjct: 294 T 294
>gi|358419360|ref|XP_001790418.2| PREDICTED: LOW QUALITY PROTEIN: purine-rich element-binding protein
gamma [Bos taurus]
gi|359080507|ref|XP_002698748.2| PREDICTED: LOW QUALITY PROTEIN: purine-rich element-binding protein
gamma [Bos taurus]
Length = 325
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 57/241 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 53 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 112
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 113 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKEQSSRRRQKHSAPSPPVSVGSEEHPHS 172
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G +I PAQ +
Sbjct: 173 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHTLGLEQTIVLPAQGM 232
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
++ LI D+++ +D PEG R +NKRF+F+V N G F+++
Sbjct: 233 IEFRDALVQLIEDYGEGDIEERRGGDDDPMELPEGTSFRVDNKRFYFDVGSNKYGIFLKL 292
Query: 482 S 482
+
Sbjct: 293 T 293
>gi|18400976|ref|NP_565612.1| 3'-5' exonuclease and KH-I domain-containing protein [Arabidopsis
thaliana]
gi|13605561|gb|AAK32774.1|AF361606_1 At2g25910/F17H15.6 [Arabidopsis thaliana]
gi|18491139|gb|AAL69538.1| At2g25910/F17H15.6 [Arabidopsis thaliana]
gi|20197359|gb|AAC42241.2| expressed protein [Arabidopsis thaliana]
gi|21554875|gb|AAM63716.1| unknown [Arabidopsis thaliana]
gi|330252677|gb|AEC07771.1| 3'-5' exonuclease and KH-I domain-containing protein [Arabidopsis
thaliana]
Length = 341
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 33 ATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
A LN S +G D EG+DL GK+ ++ +A N I++ DV ++
Sbjct: 45 ADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQIAFSNA-IYLVDVIEGGEVIMKA-CKP 102
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
LES+ I KVIH D+ L F IRL NV DTQ A++ ++ + R D +
Sbjct: 103 ALESNYITKVIHDCKRDSEALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVS 162
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L ++ IS K+ ++ L R++P W RP+T M+ AA DV LL L+H+M
Sbjct: 163 LLADPRYCGISYEE-KEEVRVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKM 218
>gi|79323071|ref|NP_001031418.1| 3'-5' exonuclease and KH-I domain-containing protein [Arabidopsis
thaliana]
gi|330252678|gb|AEC07772.1| 3'-5' exonuclease and KH-I domain-containing protein [Arabidopsis
thaliana]
Length = 342
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 33 ATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
A LN S +G D EG+DL GK+ ++ +A N I++ DV ++
Sbjct: 45 ADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQIAFSNA-IYLVDVIEGGEVIMKA-CKP 102
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
LES+ I KVIH D+ L F IRL NV DTQ A++ ++ + R D +
Sbjct: 103 ALESNYITKVIHDCKRDSEALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVS 162
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L ++ IS K+ ++ L R++P W RP+T M+ AA DV LL L+H+M
Sbjct: 163 LLADPRYCGISYEE-KEEVRVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKM 218
>gi|68073827|ref|XP_678828.1| 3'-5' exonuclease [Plasmodium berghei strain ANKA]
gi|56499420|emb|CAI00231.1| 3'-5' exonuclease, putative [Plasmodium berghei]
Length = 383
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 73 IGLDIEGYKIGKNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKSIIKVTH 130
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+T + + L Q I +DLL
Sbjct: 131 DCREDCSILFNQYNINLNNIFDTQIAYTLILKKSKKELYQ------ISYDDLLYKCLFLN 184
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
NN K + N I+ RP++ +++ YA DV L
Sbjct: 185 NNHKIYFHKIISLNNKIYLKRPISKELIHYAVQDVLYL 222
>gi|297825683|ref|XP_002880724.1| hypothetical protein ARALYDRAFT_481448 [Arabidopsis lyrata subsp.
lyrata]
gi|297326563|gb|EFH56983.1| hypothetical protein ARALYDRAFT_481448 [Arabidopsis lyrata subsp.
lyrata]
Length = 342
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 33 ATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
A LN S +G D EG+DL GK+ ++ +A N I++ DV ++
Sbjct: 45 ADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQIAFSNA-IYLVDVIEGGEVLMKA-CKP 102
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
LES I KVIH D+ L F IRL NV DTQ A++ ++ + R D +
Sbjct: 103 ALESTYITKVIHDCKRDSEALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVS 162
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L ++ IS K+ ++ L R++P W RP+T M+ AA DV LL L+H+M
Sbjct: 163 LLADPRYCGISYEE-KEEVRVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKM 218
>gi|281347427|gb|EFB23011.1| hypothetical protein PANDA_009685 [Ailuropoda melanoleuca]
Length = 320
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 57/238 (23%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV + + R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT---------------------------- 382
SV L+D L + AH HR H
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHGKDQASRRRQKHSAPSPPVSVGSEEHPHS 169
Query: 383 -IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
+K++ + +D R+Y+LDLK+N R RF+ I Q + G G+ +I PAQ +
Sbjct: 170 VLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 229
Query: 431 ----GPIIGLI-----SDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFM 479
++ LI D+++ +D PEG R +NKRF+F+V N G F+
Sbjct: 230 IEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFL 287
>gi|410903299|ref|XP_003965131.1| PREDICTED: purine-rich element-binding protein gamma-like [Takifugu
rubripes]
Length = 342
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 109/257 (42%), Gaps = 69/257 (26%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNAL------- 365
K+FY D+KQS +F+KI+EV + + R +++ +SMS+ LR L
Sbjct: 56 KRFYLDVKQSVRGRFLKIAEVWIGRGRYDSIRKSKLTLSMSMAPALRYCLGDFIDYYARI 115
Query: 366 ----------LTAHQNTPRHRYR---------------------DTHT---IKSEVLIKD 391
L H + + R D H+ +KSE + +D
Sbjct: 116 GLRGAAAAPQLDEHNSDAQGRGHESRRGPQEPRTMLSPTCSAASDDHSHRVLKSEFIERD 175
Query: 392 TRRYFLDLKDNGRARFVTISQLLPVG---------GKLSSIAFPAQDL----GPIIGLIS 438
R+YFLDLK+N R RF+ I Q + G G +I PAQ L + LI
Sbjct: 176 NRKYFLDLKENQRGRFLRIRQTVNKGHGTMGYYGQGIEQTIVLPAQGLIEFRDALSQLIE 235
Query: 439 DLQQEH--SCP-------EDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
D +E C +D PE R +NKRF+F+V N G F++ISE+ P +
Sbjct: 236 DYGEEEMDDCGPAVARNHDDHPALPEAASFRVDNKRFYFDVGSNRYGIFLKISEVRQPYR 295
Query: 490 VLTNIGIKSNIKTDTNI 506
+ +K+ + N
Sbjct: 296 NTITVPLKAWARFGENF 312
>gi|124800774|ref|XP_001349559.1| 3'-5' exonuclease, putative [Plasmodium falciparum 3D7]
gi|3845126|gb|AAC71832.1| 3'-5' exonuclease, putative [Plasmodium falciparum 3D7]
Length = 416
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIM 80
+ +++ + N +GLD+EG +G G VS++ + ++ I+IFD+Y C + +
Sbjct: 58 VDEIKNGNYNLLKDFNMKMIGLDIEGYKIGKYGIVSIIQICYED--IYIFDIYKCDNVYL 115
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
F + ++LE D I+KV H D L + +NI LKN+ DTQ A+ L ++ +
Sbjct: 116 FINYIKDILECDDIIKVTHDCREDCSILYNQYNIHLKNILDTQVAYNLLLKNNNNYTN-- 173
Query: 141 LVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
+ I +DLLK Y NN K + + +I+ RP+ +++ YA DV
Sbjct: 174 --TYQISYDDLLKKYLFINNNHKIYFHKMITLDNYIYLKRPIMKELISYAIQDV 225
>gi|390371169|dbj|GAB65050.1| 3'-5' exonuclease domain containing protein [Plasmodium cynomolgi
strain B]
Length = 397
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 25 VQEAQ-SAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFD 82
VQE Q S A LN +G+D+EG +G +G VSL+ + Q+ +++FDVY C + +F
Sbjct: 45 VQEIQKSIYAGKLN--CMGVDVEGYKIGRNGTVSLIQICAQD--VYLFDVYKCDNIYLFI 100
Query: 83 GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ--- 139
L E+LE RI+K+ H D L + ++I L N++DTQ AF L + L Q
Sbjct: 101 NCLKELLEDRRIVKITHDCREDCSILFNQYSISLNNIFDTQVAFNLLLKETKKELYQISY 160
Query: 140 -DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
DL+ + LN++ K Y F K I + I+ RP+ +++ YA DV
Sbjct: 161 DDLLYKCLLLNNMHKIY------FHKVIS----LDQKIYLKRPIAKELIHYAIQDV 206
>gi|403372337|gb|EJY86064.1| 3'-5' exonuclease, putative [Oxytricha trifallax]
Length = 615
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 23 TDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFD 82
TD++E + + + +G+D EGM ++L+ + + N K F+FD+ L +F
Sbjct: 66 TDLEERGADVELV-----IGVDCEGM--SRQKNLALIQVGVAN-KCFLFDM--TKLTVFP 115
Query: 83 GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
L ++LE I+KV H D L+ F + V+DTQ A L R S D
Sbjct: 116 KVLKQILEDANIVKVFHDFCEDTSALVRQFQVHCDRVFDTQIAHRLL-----RKYSDDPK 170
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
+GLN LLK Y NN K+++ N + +P +W RPL+ +M YA+ DV L ++
Sbjct: 171 DQNLGLNMLLKHYLNVENNQKESMVNQMKSDPELWWKRPLSYEMQEYASQDVLYLPRVYE 230
Query: 203 RM 204
M
Sbjct: 231 AM 232
>gi|390359561|ref|XP_003729508.1| PREDICTED: uncharacterized protein LOC100893717 [Strongylocentrotus
purpuratus]
Length = 569
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 41 VGLDLEGMDLGVDG-KVSLVSLALQNGKIFIFDV---YSCPLIMFDGKLHEVLESDRILK 96
+ D +G L D +V+LV L+ +G+++IFDV +M +G+L E+LE++ ++K
Sbjct: 373 ISFDCKGPVLEDDKMEVALVQLSTIDGEVWIFDVTEKEGKTSLMKEGRLKELLEAECVMK 432
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAF-TALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
V+H A L F +++ NV+DT A+ T L + + ++ H I L+ L +
Sbjct: 433 VMHDCLNTATNLFRQFEVKMCNVFDTTLAYETLLNQCNIFPVEHEVTRHRIELSSLCEMV 492
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA-LFHRMTK--EYALKQ 212
+ + + + NPH+W RPL+ D++ YAA V +L+ +F+++ + A +Q
Sbjct: 493 GETYKGEDDKMSEVLKNNPHMWDDRPLSEDLVKYAAGTVRALVPRVFNKLDRLIHPAWQQ 552
Query: 213 NRLLLDNLIYETL 225
D + ETL
Sbjct: 553 ---YFDWMCEETL 562
>gi|224009215|ref|XP_002293566.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970966|gb|EED89302.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 291
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 21/172 (12%)
Query: 33 ATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS--CPLIMFDGKLHEVLE 90
++I ++K+ D EG++L G V +VS+ + ++++ D CP I+ + E+ E
Sbjct: 45 SSIDKDAKIAFDCEGVNLSRLGSVEIVSICFSSSEVYLIDFGKEKCPKIV--EAVKELFE 102
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG--L 148
+ K+IH D L N I+L NV+DT AF D + + G L
Sbjct: 103 CSTLTKIIHDCRMDFDALYHNHGIKLVNVHDTS-AF------------HDFIGYEKGKNL 149
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
ND L +Y I N + +++Y+ NP+ W RPLT M+ +A++DV+ L L
Sbjct: 150 NDTLSYYGIRVNTERD--KSVYKSNPNFWAARPLTKKMIDWASSDVDKLFQL 199
>gi|312076359|ref|XP_003140825.1| 3'-5' exonuclease [Loa loa]
Length = 596
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 16 MNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGK--VSLVSLALQNGK 67
+NR NL+ ++ AQ ++++I + E VG+D + + LGV G+ +SL+ LA +
Sbjct: 314 INRINLVKALKPAQESVSSINAEIDNMEERVVGVDFKTVILGVQGEEFLSLIVLATTT-Q 372
Query: 68 IFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
I +FDV I+ + + E+LES++I+KVIH A A L + I L+ ++DTQ A
Sbjct: 373 IVVFDVVHSDTILLESGVKEILESEKIIKVIHDAKRVATLLAHRYAINLRKIFDTQVAHA 432
Query: 128 ALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
LQ D+ HT+ +L + Y +P W RP+T D L
Sbjct: 433 ILQHEKFGKALTDM--HTVSFRNLQRIYYPQSIMMSDTTPRKLSHSPS-WGLRPITEDFL 489
Query: 188 LYAAADVESLLALFHRM 204
+ + L+ + +RM
Sbjct: 490 VTVVEEAHCLVTVLYRM 506
>gi|118343960|ref|NP_001071804.1| PUR-alpha/beta/gamma protein [Ciona intestinalis]
gi|70571016|dbj|BAE06663.1| Ci-PUR-alpha/beta/gamma [Ciona intestinalis]
Length = 306
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 33/201 (16%)
Query: 307 EVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLR------- 359
E + +K Q NK+FY D+KQ+ +FIKI+EV +N++ +SM + R
Sbjct: 31 EELASKTIQTQNKRFYLDVKQNARGRFIKIAEVTPGGHKNRLTLSMPIACEFRNVLCDFI 90
Query: 360 DHLNALLTAHQNT-PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPV-- 416
+H + L + + P R ++K+E + ++ +RYFLDLK+N R RF+ + Q
Sbjct: 91 EHYSTLGPTNPDALPDER---RTSLKTERITRENKRYFLDLKENQRGRFLRVRQQQAFNQ 147
Query: 417 ---GGKLS---SIAFPAQDL----GPIIGLISDLQQEHSCPEDEDGAPE----GNYMRCN 462
G+ + IA PAQ + + LI + Q+ ++ P GNY
Sbjct: 148 YNQDGRPNNPPQIALPAQGMVEFRDALTALIDEFAQDAG---EQAELPSSHVIGNY---R 201
Query: 463 NKRFFFNVSKNGKGTFMRISE 483
+K FF +V N +G FMR++E
Sbjct: 202 SKMFFLDVGHNQRGVFMRVTE 222
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 359 RDHLNALLTAHQNTPRHRYRDTHTIKSEVLIKDT-----RRYFLDLKDNGRARFVTISQL 413
RD + T + R YR+ +++E L T +R++LD+K N R RF+ I+++
Sbjct: 4 RDGNGDVETRSGSGSRQYYRNQTHMETEELASKTIQTQNKRFYLDVKQNARGRFIKIAEV 63
Query: 414 LPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC--PEDEDGAPEGNYMRC-------NNK 464
P GG + + ++ D + +S P + D P+ NK
Sbjct: 64 TP-GGHKNRLTLSMPIACEFRNVLCDFIEHYSTLGPTNPDALPDERRTSLKTERITRENK 122
Query: 465 RFFFNVSKNGKGTFMRISE 483
R+F ++ +N +G F+R+ +
Sbjct: 123 RYFLDLKENQRGRFLRVRQ 141
>gi|393910053|gb|EFO23245.2| 3'-5' exonuclease [Loa loa]
Length = 573
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 16 MNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGK--VSLVSLALQNGK 67
+NR NL+ ++ AQ ++++I + E VG+D + + LGV G+ +SL+ LA +
Sbjct: 291 INRINLVKALKPAQESVSSINAEIDNMEERVVGVDFKTVILGVQGEEFLSLIVLATTT-Q 349
Query: 68 IFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
I +FDV I+ + + E+LES++I+KVIH A A L + I L+ ++DTQ A
Sbjct: 350 IVVFDVVHSDTILLESGVKEILESEKIIKVIHDAKRVATLLAHRYAINLRKIFDTQVAHA 409
Query: 128 ALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
LQ D+ HT+ +L + Y +P W RP+T D L
Sbjct: 410 ILQHEKFGKALTDM--HTVSFRNLQRIYYPQSIMMSDTTPRKLSHSPS-WGLRPITEDFL 466
Query: 188 LYAAADVESLLALFHRM 204
+ + L+ + +RM
Sbjct: 467 VTVVEEAHCLVTVLYRM 483
>gi|334330892|ref|XP_001372317.2| PREDICTED: purine-rich element-binding protein gamma-like
[Monodelphis domestica]
Length = 450
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 58/246 (23%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLN------ALL 366
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L++ L A L
Sbjct: 172 KRFYLDVKQSPRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKECLGDFIEHYAHL 231
Query: 367 TAHQNTPRHRYRDTH-------------------------TIKSEVLIKDTRRYFLDLKD 401
+ P H + H +K++ + +D R+Y+LDLK+
Sbjct: 232 GLKAHRPEHGHDQEHDARRRPQSSAPSPPASVVSEEHPHSVLKTDYIERDNRKYYLDLKE 291
Query: 402 NGRARFVTISQLL---PVG--------GKLSSIAFPAQDL----GPIIGLI-----SDLQ 441
N R RF+ I Q L P G G+ +I PAQ + ++ LI DL+
Sbjct: 292 NQRGRFLRIRQTLTRGPGGMGYFGHTLGQEQTIVLPAQGMIEFRDALVQLIEDYGNGDLE 351
Query: 442 QEH-SCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNI 500
+ H E+ PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 352 EPHRGGEEEPLELPEGTSFRVDNKRFYFDVGSNRYGVFLKVSEVRPPYRNTVTVPYKAWT 411
Query: 501 KTDTNI 506
+ N
Sbjct: 412 RFGENF 417
>gi|401408493|ref|XP_003883695.1| Exonuclease 3'-5' domain-like-containing protein 1, related
[Neospora caninum Liverpool]
gi|325118112|emb|CBZ53663.1| Exonuclease 3'-5' domain-like-containing protein 1, related
[Neospora caninum Liverpool]
Length = 355
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 7 PQNNLLRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNG 66
P + L LM + + A + + V LD EG+ LG G++ V +A
Sbjct: 44 PPSPLTTYLMVQRQISPSSVSASPFLTGDFSRQLVALDCEGVALGRFGRMCTVQIATST- 102
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+ D + ++ + KL E+LES I+KV H DA LL IRL+NV+DTQ A
Sbjct: 103 HTLLLDAFKTGVVGGNKKLKEILESPHIVKVCHDCREDASALLHQHTIRLRNVFDTQVAH 162
Query: 127 T--ALQLSDPRLLSQDLVPHTIGLNDLLK-FYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
+ Q + R + L++L + F + K ++ +P +W RPL
Sbjct: 163 QIWSEQKGETRFQAS--------LSELFRSFLNLRDGGVAKQAKSAMEADPSVWCQRPLP 214
Query: 184 SDMLLYAAADVESLLALFH 202
+D+L YA V LL L H
Sbjct: 215 TDLLRYAVFGVSHLLDLAH 233
>gi|221053221|ref|XP_002257985.1| 3'-5' exonuclease [Plasmodium knowlesi strain H]
gi|193807817|emb|CAQ38522.1| 3'-5' exonuclease, putative [Plasmodium knowlesi strain H]
Length = 384
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 25 VQEAQ-SAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFD 82
VQE Q S LN +GLD+EG +G +G VSLV + Q+ +++FDVY C +F
Sbjct: 63 VQEIQKSVQDGKLN--CIGLDVEGYKIGRNGTVSLVQICAQD--VYLFDVYKCDNTFLFI 118
Query: 83 GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
L E+LE RI+K+ H D L + ++I L N++DTQ A+ L + L Q
Sbjct: 119 KCLKELLEDGRIVKITHDCREDCSILFNQYSISLNNIFDTQVAYNLLSKETKKDLYQ--- 175
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
I +DLL + N K + + I+ RP+ +++ YA DV
Sbjct: 176 ---ISYDDLLYKCLLLHNKHKIYFHKMISLDQKIYLKRPIGKELIHYAIQDV 224
>gi|341880344|gb|EGT36279.1| hypothetical protein CAEBREN_05919 [Caenorhabditis brenneri]
gi|341890622|gb|EGT46557.1| hypothetical protein CAEBREN_26077 [Caenorhabditis brenneri]
Length = 227
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 7/170 (4%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLT--AHQNTPRHR 376
K++Y D+ ++ ++IKI+E+ + +++I +S++ + + +L A Q T H
Sbjct: 27 KRYYIDVNENPRGRYIKIAELGAN-YKSRIILSIAAAKAVVAEVGKVLPLMAEQPTGEHA 85
Query: 377 YRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS--SIAFPAQDLGPII 434
+++ IKSE L D R++++DLK+N R RF+ I+Q +P+ + + IA P+ + I
Sbjct: 86 PKESSLIKSETLNVDGRKFYIDLKENERGRFLRIAQ-MPMNPRQTRQQIAIPSDGIVEIH 144
Query: 435 GLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
+SD + D++ A + NK F FNV KN +G F+RISEI
Sbjct: 145 KSLSDYLVQFGEGHDQESANTAK-VTAENKSFLFNVGKNDRGEFVRISEI 193
>gi|168060140|ref|XP_001782056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666467|gb|EDQ53120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 319
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G++ ++ LA N + V +M KL LES I+KV H
Sbjct: 30 IGFDCEGVDLARYGRLCVMQLAFDNAVYLVDAVLGGNALMQSCKLG--LESPYIIKVCHD 87
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL---KFYKI 157
D+ L +NI+L NV+DTQ AF+ L+ + D I DLL ++ +
Sbjct: 88 CKRDSEALYFQYNIKLNNVFDTQIAFSLLEEQRGKNWMPD---DYISFVDLLADERYCGV 144
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYA-LKQNRLL 216
+ + K+ ++ L R++P W RP T M AA DV LL ++ RM K L + RL
Sbjct: 145 AYDE-KEEVRMLLRKDPQFWAHRPWTVMMKRVAADDVRFLLCIYERMVKSLTDLSKWRLH 203
Query: 217 LDNLIYETLF 226
+ + +Y F
Sbjct: 204 VRSSLYCQCF 213
>gi|148909222|gb|ABR17711.1| unknown [Picea sitchensis]
Length = 317
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 25 VQEAQSAMATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
V EA L S +G D EG+DL G++ ++ LA ++ + V L+
Sbjct: 16 VTEASQLPCAFLEPSPERQLVIGFDCEGVDLARYGRLCIMQLAFEDAVYLVDAVEGGHLL 75
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M K LES + KV+H D+ L + I+L NV DTQ A++ ++ + R +
Sbjct: 76 MQACK--PALESVYVTKVVHDCKRDSEALYFQYGIKLNNVVDTQIAYSLIEEQEGRKWAP 133
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
D +GL ++ +S K+ ++ L RE+P W+ RPLT M AA DV LL
Sbjct: 134 DEYISFVGLLADPRYCGVSYAE-KEEVRTLLREDPKFWEHRPLTYMMKKTAADDVRFLLH 192
Query: 200 LFHRMTKEYAL 210
++++M ++ L
Sbjct: 193 IYNKMIEKLEL 203
>gi|395541828|ref|XP_003772839.1| PREDICTED: purine-rich element-binding protein gamma [Sarcophilus
harrisii]
Length = 346
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 58/246 (23%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AHQ 370
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L++ L + AH
Sbjct: 68 KRFYLDVKQSPRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKECLGDFIEHYAHL 127
Query: 371 NTPRHRYRDTH-----------------------------TIKSEVLIKDTRRYFLDLKD 401
HR H +K++ + +D R+Y+LDLK+
Sbjct: 128 GLKAHRLEHGHDREHDARRRPQPSAPSPPASVVSEEHPHSVLKTDYIERDNRKYYLDLKE 187
Query: 402 NGRARFVTISQLL---PVG--------GKLSSIAFPAQDL----GPIIGLI-----SDLQ 441
N R RF+ I Q L P G G+ +I PAQ + ++ LI SDL+
Sbjct: 188 NQRGRFLRIRQTLTRGPGGMGYFGHTLGQEQTIVLPAQGMIEFRDALVQLIEDYGDSDLE 247
Query: 442 Q-EHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNI 500
+ + E+ PEG R +NKRF+F+V N G F+++SE+ P + + K+
Sbjct: 248 EPQRGGEEEPLELPEGTSFRVDNKRFYFDVGSNRYGVFLKVSEVRPPYRNTITVPYKAWT 307
Query: 501 KTDTNI 506
+ N
Sbjct: 308 RFGENF 313
>gi|82753293|ref|XP_727619.1| 3'-5' exonuclease [Plasmodium yoelii yoelii 17XNL]
gi|23483550|gb|EAA19184.1| 3'-5' exonuclease, putative [Plasmodium yoelii yoelii]
Length = 410
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 73 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 130
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 131 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 184
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
NN K + + I+ RP++ +++ YA DV
Sbjct: 185 NNHKIYFHKIISLDNKIYLKRPISKELIHYAVQDV 219
>gi|403345654|gb|EJY72204.1| 3'-5' exonuclease domain-containing protein [Oxytricha trifallax]
Length = 747
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 21 LITDVQEAQSAMATILN---ESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP 77
+IT +E Q+ IL + +G+D EG+ G +SL+ + GK ++FD+
Sbjct: 47 IITKPEEVQAISQAILKTKPDPILGVDCEGLSKGR--PLSLLQMYFA-GKCYLFDLLK-- 101
Query: 78 LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLL 137
L F+ L EV+ES I+K+ H D L++ +N+ V+DTQ A +Q + +
Sbjct: 102 LNPFNHGLLEVMESKTIIKIFHDFCEDQSALINQYNMTCYYVFDTQIAHRVIQQAICKTS 161
Query: 138 S-QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
Q+ + I L +LLK Y + K I R + W+ RPLT DM+ YA DV
Sbjct: 162 KLQNFKDNNISLANLLKTYIDVVHTKKHEISAKMRNDDMFWEKRPLTQDMIDYATQDVCY 221
Query: 197 LLALFHRMTKEYA 209
L ++ ++ KEY
Sbjct: 222 LPMVYQKLQKEYG 234
>gi|70949124|ref|XP_744002.1| 3'-5' exonuclease [Plasmodium chabaudi chabaudi]
gi|56523765|emb|CAH76355.1| 3'-5' exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 383
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 73 IGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYKCDNSYLFVKYLKELFENKNIIKVAH 130
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 131 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 184
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
NN K + + I+ RP++ +++ YA DV
Sbjct: 185 NNHKIYFHKIISLDNKIYLKRPISKELIHYAVQDV 219
>gi|308491362|ref|XP_003107872.1| CRE-PLP-2 protein [Caenorhabditis remanei]
gi|308249819|gb|EFO93771.1| CRE-PLP-2 protein [Caenorhabditis remanei]
Length = 227
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLT--AHQNTPRHR 376
K++Y D+ ++ ++IKI+E+ + +++I +S+ + + ++ +L +T H
Sbjct: 27 KRYYIDVNENTRGRYIKIAELGAN-YKSRIILSIPAAKAVVNEVSKMLPLLEEPSTGEHA 85
Query: 377 YRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS--SIAFPAQDLGPII 434
+++ IKSE L D R++F+DLK+N R RF+ I+Q +P + + IA PA + +
Sbjct: 86 PKESSLIKSETLNVDGRKFFIDLKENDRGRFLRIAQ-MPTNPRQTRQQIAVPADGVEEVY 144
Query: 435 GLISDLQQEHSCPEDED--GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
++SD + D++ P+ + NK F F+ KN +G F+RISEI
Sbjct: 145 KVLSDYLVKFGEGHDQENTNTPK---VTAENKSFLFHYGKNDRGEFVRISEI 193
>gi|255637101|gb|ACU18882.1| unknown [Glycine max]
Length = 278
Score = 78.2 bits (191), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ LA + + + ++ K LES+ I KVIH
Sbjct: 61 IGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGGEELIIACK--PALESNYITKVIHD 118
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ ++ + R +D +GL ++ S +
Sbjct: 119 CKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLRDDYISFVGLLADPRYCGKSYD 178
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
K+ ++ L R++P W+ RPL+ M+ AA DV LL ++H+M ++
Sbjct: 179 E-KEEVRVLLRQDPKFWRHRPLSEQMVRAAADDVRFLLYIYHQMMEK 224
>gi|410961631|ref|XP_003987383.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Felis
catus]
Length = 623
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 203 QKFGAAMLHIKKQSVLSVATEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 261
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 262 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 317
Query: 146 IG--LNDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P +F + Q L +ENP +W TRPL+ +L
Sbjct: 318 ISSLQESLIRHLKVAPKYLSFLEERQKLIQENPEVWFTRPLSPSLL 363
>gi|291403202|ref|XP_002717830.1| PREDICTED: exonuclease 3'-5' domain containing 1 [Oryctolagus
cuniculus]
Length = 558
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + +EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAMLHIKKQSVLSVAVEGANVCRHGKLCWLQVA-SNSRVYLFDIFLLGRRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLNNVFDTQVA-DVLQFS---METGGFLPNC 258
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P + F + Q L +ENP +W TRPL+ +L
Sbjct: 259 ISTLQESLIRHLKVAPKHLSFLEERQKLIQENPDVWFTRPLSPSLL 304
>gi|74000167|ref|XP_535437.2| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Canis
lupus familiaris]
Length = 569
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 142 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 200
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 201 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 256
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P +F + Q L +ENP +W TRPL+ +L
Sbjct: 257 ISSLKESLIRHLKMAPKYLSFLEERQKLIQENPEVWFTRPLSPSLL 302
>gi|356510063|ref|XP_003523760.1| PREDICTED: uncharacterized protein LOC100784751 [Glycine max]
Length = 327
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 5/197 (2%)
Query: 10 NLLRTLMNRTNLITDVQEAQSAMATILNESK--VGLDLEGMDLGVDGKVSLVSLALQNGK 67
NL + ++T E +A SK +G D EG+ LG DG + ++ LA +
Sbjct: 13 NLHPSHRAEVRIVTKASELPAAFLAPSPSSKLVIGFDNEGVKLGRDGTLCVMQLAFDDA- 71
Query: 68 IFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
I+I D + LES+ + KVIH D+ L F IRL NV DTQ A++
Sbjct: 72 IYIVDTIEGEENLVMKACKAALESEHVTKVIHDCKRDSEALYFQFGIRLNNVVDTQIAYS 131
Query: 128 ALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
++ + D + L D P K+ ++ + + N W+ RPLT L
Sbjct: 132 LIESQEQGKKVNDYISFVDLLADPRYCGVAYPE--KEEVRLILKRNTEFWRERPLTEYKL 189
Query: 188 LYAAADVESLLALFHRM 204
AAADV L+ ++H+M
Sbjct: 190 NAAAADVRYLIHIYHKM 206
>gi|440898979|gb|ELR50362.1| Exonuclease 3'-5' domain-containing protein 1 [Bos grunniens mutus]
Length = 578
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 151 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 209
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 210 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---VETGGFLPNC 265
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ KI+P + F + Q RENP +W TRPL+ +L
Sbjct: 266 ISTLQESLIRHLKIAPKHLSFLEVRQKWIRENPELWFTRPLSPSLL 311
>gi|255550866|ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223544301|gb|EEF45822.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 342
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 25 VQEAQSAMATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
V +A A LN + +G D EG+DL G + ++ +A + IF+ D +
Sbjct: 38 VTDASQLPAEFLNPTPDKQLIIGFDCEGVDLCRHGTLCIMQIAFPDA-IFLVDATQGGEM 96
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
+ LES I KVIH D+ L F I+L NV+DTQ A++ ++ + R
Sbjct: 97 LLKA-CKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVFDTQIAYSLIEEQEGRTKLP 155
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
D +GL ++ IS K+ ++ L R++ + W RPL+ M+ AA DV LL
Sbjct: 156 DDYISFVGLLADPRYCGISYLE-KEEVRLLLRQDSNFWTYRPLSELMIRAAADDVRFLLY 214
Query: 200 LFHRMTK 206
++H+M K
Sbjct: 215 IYHKMIK 221
>gi|225429426|ref|XP_002276186.1| PREDICTED: uncharacterized protein LOC100259526 [Vitis vinifera]
gi|147856945|emb|CAN82846.1| hypothetical protein VITISV_007988 [Vitis vinifera]
gi|296081603|emb|CBI20608.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ +A + + + ++M K LES I KVIH
Sbjct: 58 IGFDCEGVDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACK--PALESSYITKVIHD 115
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ ++ + R + LV I LL +
Sbjct: 116 CKRDSEALYFQFGIKLHNVVDTQIAYSLIEEQEGR---KRLVDDYISFVGLLADPRYCGV 172
Query: 161 NF--KKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
++ K+ +++L R+NP W RPL+ M+ AA DV LL ++H+M +
Sbjct: 173 SYLEKQEVRDLLRQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMME 220
>gi|348579969|ref|XP_003475751.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Cavia
porcellus]
Length = 571
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+ E RILKVIH + L + I L NV+DTQ A Q S + + +P+
Sbjct: 203 QMIFEDKRILKVIHDCRWLSDCLFHQYGIMLNNVFDTQVA-DVFQFS---IETGGFLPNC 258
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L++ ++P + F ++ Q L +ENP +W TRPL +L A LL L
Sbjct: 259 ISTLQESLIRHLNVAPKHLSFLEDRQKLIQENPEVWFTRPLPPSLLKILALQATYLLPL 317
>gi|344294180|ref|XP_003418797.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Loxodonta africana]
Length = 592
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 172 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 230
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 231 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 286
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P +F + Q L +ENP +W TRPL+ +L
Sbjct: 287 ISTLQESLIRHLKVAPKYVSFLEERQKLTQENPEVWFTRPLSPTLL 332
>gi|358411916|ref|XP_003582162.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like [Bos
taurus]
Length = 506
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 79 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 137
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 138 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---VETGGFLPNC 193
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ KI+P + F + Q RENP +W TRPL+ +L
Sbjct: 194 ISTLQESLIRHLKIAPKHLSFLEVRQKWIRENPELWFTRPLSPSLL 239
>gi|356564093|ref|XP_003550291.1| PREDICTED: uncharacterized protein LOC100788577 [Glycine max]
Length = 343
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ LA + + + ++ K LES+ I KVIH
Sbjct: 61 IGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGGEELIIACK--PALESNYITKVIHD 118
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ ++ + R +D +GL ++ S +
Sbjct: 119 CKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLRDDYISFVGLLADPRYCGKSYD 178
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
K+ ++ L R++P W+ RPL+ M+ AA DV LL ++H+M
Sbjct: 179 E-KEEVRVLLRQDPKFWRHRPLSEQMVRAAADDVRFLLYIYHQM 221
>gi|431896107|gb|ELK05525.1| Exonuclease 3'-5' domain-containing protein 1 [Pteropus alecto]
Length = 423
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 142 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 200
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 201 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 256
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P F + Q L +ENP +W TRPL+ +L
Sbjct: 257 ISTLQESLIRHLKVAPKYLFFLEERQKLIQENPEVWFTRPLSPSLL 302
>gi|82621130|gb|ABB86253.1| 3'-5' exonuclease domain-containing protein-like [Solanum
tuberosum]
Length = 338
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ LA + + V ++ K LES+ I KVIH
Sbjct: 56 IGFDCEGVDLCRHGTLCIMQLAFPDAIYLVDAVQGGEAVVQACK--PALESNYITKVIHD 113
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ + + D +GL ++ +S +
Sbjct: 114 CKRDSEALYFQFGIKLHNVVDTQIAYSLINEQEGHARVPDCHISFVGLLADPRYCGVSYD 173
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
K+ ++ L R++P W RPL+ M+ AA DV LL ++H+M +
Sbjct: 174 E-KEEVRVLLRQDPKYWTYRPLSEQMIRAAADDVRFLLHIYHKMVQ 218
>gi|297479522|ref|XP_002690868.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Bos
taurus]
gi|296483301|tpg|DAA25416.1| TPA: hypothetical protein BOS_10707 [Bos taurus]
Length = 662
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 235 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 293
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 294 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---VETGGFLPNC 349
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ KI+P + F + Q RENP +W TRPL+ +L
Sbjct: 350 ISTLQESLIRHLKIAPKHLSFLEVRQKWIRENPELWFTRPLSPSLL 395
>gi|268536146|ref|XP_002633208.1| C. briggsae CBR-PLP-1 protein [Caenorhabditis briggsae]
Length = 226
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLT--AHQNTPRHR 376
K++Y D+ ++ ++IKI+E+ + +++I +S+ + ++ +L +T H
Sbjct: 27 KRYYIDVNENTRGRYIKIAELG-NSYKSRIILSIPAAKAVVSEVSKMLPLLDEPSTGEHA 85
Query: 377 YRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS--SIAFPAQDLGPII 434
+++ TIKSE L D R++++DLK+N R RF+ I+Q +P + + IA PA + +
Sbjct: 86 PKESVTIKSETLNVDGRKFYVDLKENDRGRFLRIAQ-MPTNPRQTRQQIAVPADGIAEVH 144
Query: 435 GLISD-LQQEHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
++S+ L + E E+ P+ + NK F F+ KN +G F+RISEI
Sbjct: 145 KVLSEYLTKFGEGHEQENTNTPK---ITAENKSFLFHAGKNDRGEFLRISEI 193
>gi|395503433|ref|XP_003756070.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1
[Sarcophilus harrisii]
Length = 536
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ SAM I +S + + EG++L GK+ + +A + ++++FD++ F+ L
Sbjct: 143 QKFGSAMLHIKKQSVLSVAAEGVNLCRHGKLCWLQVATSS-RVYLFDIFLLGSRAFNNGL 201
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE +ILKVIH + L + I L NV+DTQ A LQ S + + +PH
Sbjct: 202 QMVLEDRKILKVIHDCRWLSDCLSHQYGIVLSNVFDTQVA-DVLQFS---METGGFLPHC 257
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P +F + Q + +ENP IW RPL +L
Sbjct: 258 ISTLQESLIRHLKMTPKCVSFLDDKQKMVQENPEIWFMRPLPPSLL 303
>gi|256084944|ref|XP_002578685.1| pur-alpha [Schistosoma mansoni]
gi|360042861|emb|CCD78271.1| putative pur-alpha [Schistosoma mansoni]
Length = 297
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 315 QCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALL-------- 366
Q K+FY D+K+++ F+KI+EV+ D + +I +++ ++D L L+
Sbjct: 43 QVQKKRFYVDVKKNRRGIFMKIAEVSSDGRKARILLTLQAAVEIKDKLKDLIDVLEEIKS 102
Query: 367 ----TAHQNTPRHRYRDTHT----IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGG 418
+ QN+ ++ D IKS ++ RRYFLDLK N R F+ ++ L
Sbjct: 103 NDEGSGAQNSDANKTTDLQPANSLIKSHIVNYPYRRYFLDLKRNKRGHFLRLTML----S 158
Query: 419 KLSSI--AFPAQDLGPIIGLISD-LQQEHSCPEDEDGA----PEGNYMRCNNKRFFFNVS 471
L+ I A P+Q + + I+D L + E D PE +R +N+ +F+ S
Sbjct: 159 TLNRIQLAIPSQGMLDLYNAINDMLGKWWDGSEVNDSKSLSLPESKSLRFDNRTLYFDSS 218
Query: 472 KNGKGTFMRISEISTPSKVLTNIGIKS 498
N GT++RISE+ T S+ I +S
Sbjct: 219 FNRFGTYLRISEVRTASRTAITIPGRS 245
>gi|356552318|ref|XP_003544515.1| PREDICTED: uncharacterized protein LOC100810098 [Glycine max]
Length = 344
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ LA + + + ++ K LES+ I KVIH
Sbjct: 62 IGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGGEELIIACK--PALESNYITKVIHD 119
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ ++ + R +D +GL ++ IS +
Sbjct: 120 CKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLRDDYISFVGLLADPRYCGISYD 179
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
K+ ++ L R++P W RPL+ M+ AA DV LL ++ +M
Sbjct: 180 E-KEEVRVLLRQDPKFWTHRPLSEQMIRAAADDVRFLLYIYRQM 222
>gi|241727922|ref|XP_002413785.1| conserved hypothetical protein [Ixodes scapularis]
gi|215507601|gb|EEC17093.1| conserved hypothetical protein [Ixodes scapularis]
Length = 256
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 14 TLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDV 73
TL++ T+L V + +L +GLD EG+ G++S+V+LA ++IFDV
Sbjct: 18 TLVDETSLSVRVVD------KLLESKMLGLDAEGLAARSRGRISMVTLATLWRHVYIFDV 71
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
+ +G L +LES ++LKV+H A + F ++++ V+DT A+ + +
Sbjct: 72 KESEALFEEGNLKILLESAKMLKVVHDFRNIAETFYNTFGVKVRKVFDTHSAYQTIAIQR 131
Query: 134 PRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
+ S+ +G+++L Y+ PN I+ ++P + RP+++ + Y +
Sbjct: 132 GVMESR-----VLGMDELFALYEKPPNPDSTYIKCWLNKDPTCFVIRPISTCVACYTGFN 186
Query: 194 VESLLAL 200
V LL++
Sbjct: 187 VCCLLSV 193
>gi|224142834|ref|XP_002324746.1| predicted protein [Populus trichocarpa]
gi|222866180|gb|EEF03311.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 25 VQEAQSAMATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFD------- 72
V E A LN S +G D EG+DL G + ++ LA + I++ D
Sbjct: 27 VTEPSQLPAEFLNPSAAKQLIIGFDCEGVDLCRHGTLCIMQLAFPDA-IYLVDAIKGGES 85
Query: 73 -VYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
+ +C LES I KVIH D+ L F I+L NV DTQ A++ ++
Sbjct: 86 LIRAC---------KPALESSHITKVIHDCKRDSEALYFQFGIKLHNVVDTQIAYSQIEE 136
Query: 132 SDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAA 191
+ R D +GL ++ IS K+ ++ L R++P W RPL+ M+ AA
Sbjct: 137 QEGRTRLPDDYISFVGLLADPRYCGISYLE-KEEVRVLLRQDPMFWTYRPLSEMMIHAAA 195
Query: 192 ADVESLLALFHRMTK 206
DV LL ++++M +
Sbjct: 196 DDVRFLLRIYYKMME 210
>gi|194206775|ref|XP_001503529.2| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Equus
caballus]
Length = 562
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 30 SAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L VL
Sbjct: 140 AAMLHIKKQSVLSVAAEGTNVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGLQMVL 198
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL- 148
E RILKVIH + L + I L NV+DTQ A Q S + +P+ I
Sbjct: 199 EDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVFQFSRE---TGGFLPNCISTL 254
Query: 149 -NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
L++ KI+P +F + Q RENP +W TRPL+ +L
Sbjct: 255 QESLIRHLKIAPKYLSFLEERQKRIRENPEVWFTRPLSPSLL 296
>gi|326496741|dbj|BAJ98397.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514394|dbj|BAJ96184.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL +G + ++ +A + +++ D + + LESD + KVIH
Sbjct: 50 IGFDCEGVDLCRNGALCIMQIAFPDA-VYLVDAIEGGKELVEA-CKPALESDHVTKVIHD 107
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ ++ + + + D+ + L ++ + P
Sbjct: 108 CKRDSEALYFQFGIKLHNVMDTQIAYSLIEEQEGKKRAYDVYISFVSLLADPRYCGM-PY 166
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYA-LKQNRLLLDN 219
K+ ++ L R++P+ WK RPL+ M+ A DV LL + +M ++ + + RL + +
Sbjct: 167 PEKEEVRTLLRQDPNFWKNRPLSEMMIRAATDDVRFLLNIHEKMMEKLSKVSSWRLAVRS 226
Query: 220 LIYETLF 226
+Y F
Sbjct: 227 ELYCRCF 233
>gi|281338215|gb|EFB13799.1| hypothetical protein PANDA_001056 [Ailuropoda melanoleuca]
Length = 500
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I ++ + + EG + GK+ + +A N ++++FD++ F+ L
Sbjct: 75 QKFGAAMFHIKKQTVLSVAAEGAHVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 133
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 134 KMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 189
Query: 146 IG--LNDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P +F + Q L +ENP +W TRPL+ +L
Sbjct: 190 ISSLQESLIRHLKVAPKYLSFLEERQKLIQENPEVWFTRPLSPSLL 235
>gi|432139849|gb|AGB05862.1| 3'-5' exonuclease, partial [Plasmodium berghei]
Length = 192
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGKNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKSIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+T + + L Q I +DLL
Sbjct: 113 DCREDCSILFNQYNINLNNIFDTQIAYTLILKKSKKELYQ------ISYDDLLYKCLFLN 166
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSD 185
NN K + N I+ RP++ +
Sbjct: 167 NNHKIYFHKIISLNNKIYLKRPISKE 192
>gi|118394980|ref|XP_001029847.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89284120|gb|EAR82184.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1070
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLA----LQNGK-IF 69
L +R ++ +Q A+ + +S +G+DLEG L G + L+ ++ +QN I+
Sbjct: 822 LKDRIKIVDTIQSIDEALRILQQQSYLGVDLEG-SLSKHGHIELIQISYHDFIQNHSFIY 880
Query: 70 IFDVYSCP-----LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+FD I+ + +++E I+K++ G DA L F+ ++ N DTQ
Sbjct: 881 VFDFVEMEKQQEVFILAKKAIKQIMEDKSIIKILQGCQKDALALYHLFSTQIINGLDTQV 940
Query: 125 AFTAL-QLSDPRLLSQ-------DLVPHTIGLNDLLKFYKISPNNF---KKNIQNLYR-- 171
A + QL L Q DL GLN +L+ Y +PN K Q+++
Sbjct: 941 AHNFIIQLKALSDLKQNNKKKIKDLQYFNCGLNQILQIYN-APNGLNPLKAKFQSIFVDP 999
Query: 172 -ENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
++ H K RP+ + L+Y++ DVE L+ +F + K
Sbjct: 1000 VQSAHYMKQRPINEEFLIYSSKDVEDLIPVFFNILK 1035
>gi|350578796|ref|XP_003121634.3| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Sus
scrofa]
Length = 536
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM + +S + + EG ++ GK+ + +A N ++++FD+ F+ L
Sbjct: 113 QKFGAAMLHVKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDILLLGSRAFNNGL 171
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 172 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 227
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ KI+P +F + Q +ENP +W TRPL+ +L
Sbjct: 228 ISTLQESLIRHLKIAPKYLSFLEERQKRIQENPELWFTRPLSPSLL 273
>gi|170588753|ref|XP_001899138.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158593351|gb|EDP31946.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 573
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 40/210 (19%)
Query: 17 NRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGK--VSLVSLALQNGKI 68
NR L+ ++ AQ +++ + + E +G+D + + LGV G+ +SLV LA +I
Sbjct: 293 NRIKLVKALKPAQESVSLVNAEIDSMEERVIGVDFKTVTLGVQGEEFLSLVVLA-TTMQI 351
Query: 69 FIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA 128
+FDV I+ + + E+LES++I+KVIH A A L + I L+ ++DTQ A
Sbjct: 352 VVFDVVHSDTILLESGVKEILESEKIIKVIHDAKRVATLLAHRYAINLRKIFDTQVAHAI 411
Query: 129 LQ-------LSDPRLLS-----QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI 176
LQ +SD R +S + P +I ++D ++P R+ H+
Sbjct: 412 LQYEKFGKAVSDMRTMSFVNLRRVYYPQSIMMSD------VTP-----------RKLTHL 454
Query: 177 --WKTRPLTSDMLLYAAADVESLLALFHRM 204
W RP+T D L+ + L+ + +RM
Sbjct: 455 PSWGLRPITEDFLVTVVEEAHCLVTVLYRM 484
>gi|301754868|ref|XP_002913303.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 596
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I ++ + + EG + GK+ + +A N ++++FD++ F+ L
Sbjct: 170 QKFGAAMFHIKKQTVLSVAAEGAHVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 228
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 229 KMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 284
Query: 146 IG--LNDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P +F + Q L +ENP +W TRPL+ +L
Sbjct: 285 ISSLQESLIRHLKVAPKYLSFLEERQKLIQENPEVWFTRPLSPSLL 330
>gi|302824807|ref|XP_002994043.1| hypothetical protein SELMODRAFT_138110 [Selaginella moellendorffii]
gi|300138097|gb|EFJ04877.1| hypothetical protein SELMODRAFT_138110 [Selaginella moellendorffii]
Length = 328
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+GLD EG+DL G++ ++ LA Q+ + V +M K LES + KV+H
Sbjct: 43 IGLDCEGVDLARHGRLCIMQLAFQDAIYLVDAVQGGDALMQACK--AALESPHVTKVVHD 100
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL---KFYKI 157
D+ L I+L NV+DTQ A + ++L R D I DLL K+
Sbjct: 101 CKRDSEALYFQHGIKLNNVFDTQIAHSLIELQQGRQWIPD---DCISFVDLLADAKYCVG 157
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
+ K +++L R++P W RPLT+ M AA DV LL + M +
Sbjct: 158 VAYDEKDEVRSLLRKDPEFWTHRPLTNMMKRAAADDVRFLLRIHRNMVQ 206
>gi|432139853|gb|AGB05864.1| 3'-5' exonuclease, partial [Plasmodium berghei]
Length = 191
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGKNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKSIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+T + + L Q I +DLL
Sbjct: 113 DCREDCSILFNQYNINLNNIFDTQIAYTLILKKSKKELYQ------ISYDDLLYKCLFLN 166
Query: 160 NNFKKNIQNLYRENPHIWKTRPLT 183
NN K + N I+ RP++
Sbjct: 167 NNHKIYFHKIISLNNKIYLKRPIS 190
>gi|432139847|gb|AGB05861.1| 3'-5' exonuclease, partial [Plasmodium berghei]
gi|432139851|gb|AGB05863.1| 3'-5' exonuclease, partial [Plasmodium berghei]
Length = 188
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 52 IGLDIEGYKIGKNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKSIIKVTH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+T + + L Q I +DLL
Sbjct: 110 DCREDCSILFNQYNINLNNIFDTQIAYTLILKKSKKELYQ------ISYDDLLYKCLFLN 163
Query: 160 NNFKKNIQNLYRENPHIWKTRPLT 183
NN K + N I+ RP++
Sbjct: 164 NNHKIYFHKIISLNNKIYLKRPIS 187
>gi|255647529|gb|ACU24228.1| unknown [Glycine max]
Length = 345
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ LA + + + ++ K LES+ I KVIH
Sbjct: 62 IGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGGEELIIACK--PALESNYITKVIHD 119
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L N DTQ A++ ++ + R +D +GL ++ IS +
Sbjct: 120 CKRDSEALYFQFGIKLNNAVDTQIAYSLIEEQEGRKRLRDDYISFVGLLADPRYCGISYD 179
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
K+ ++ L R++P W RPL+ M+ AA DV LL ++ +M
Sbjct: 180 E-KEEVRVLLRQDPKFWTHRPLSEQMIRAAADDVRFLLYIYRQM 222
>gi|302789405|ref|XP_002976471.1| hypothetical protein SELMODRAFT_104837 [Selaginella moellendorffii]
gi|300156101|gb|EFJ22731.1| hypothetical protein SELMODRAFT_104837 [Selaginella moellendorffii]
Length = 328
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+GLD EG+DL G++ ++ LA Q+ + V +M K LES + KV+H
Sbjct: 43 IGLDCEGVDLARHGRLCIMQLAFQDAIYLVDAVQGGDALMQACK--PALESPHVTKVVHD 100
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL---KFYKI 157
D+ L I+L NV+DTQ A + ++L R D I DLL K+
Sbjct: 101 CKRDSEALYFQHGIKLNNVFDTQIAHSLIELQQGRQWIPD---DCISFVDLLADAKYCVG 157
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
+ K +++L R++P W RPLT+ M AA DV LL + M +
Sbjct: 158 VAYDEKDEVRSLLRKDPEFWTHRPLTNMMKRAAADDVRFLLRIHRNMVQ 206
>gi|321478345|gb|EFX89302.1| hypothetical protein DAPPUDRAFT_310282 [Daphnia pulex]
Length = 438
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 8 QNNLLRTLMNRTNLITDVQE-AQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNG 66
+ L TL N T LI ++ E +SA+ + ES VGL +EG+ G G V + +A +
Sbjct: 162 EGGLASTLPNYT-LIENIDELYKSAIGRLEKESVVGLSMEGVRTGRFGVVCWIGVATSD- 219
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
+F+FD+ S + L + +D+++KVIH + + + ++L NV+DTQ
Sbjct: 220 HVFLFDMCSLGSTGVNRGLANIFTNDKVIKVIHDCRFMSDAFVHQYGVKLNNVFDTQVGA 279
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
+ + ++ + T L D+L +S + +K + + +E+ IWKTRPL +
Sbjct: 280 LVVVKNKHGSFNRYVPSLTRSLTDILNLPSMSMYHPRKRMGH-EKEDEAIWKTRPLPQHL 338
Query: 187 LLYAAADV-----------ESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIR 235
+ A +V E LL+ T Y + + L D++ + + HV+P++ +
Sbjct: 339 IEGAVFNVCWLRKLRLAIMEILLSDVTFGTSLYLKEISELADDSVAEKGVVAHVIPMSFK 398
Query: 236 KRRQFRQN 243
+ +N
Sbjct: 399 ALHKMSRN 406
>gi|296214138|ref|XP_002753640.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1
[Callithrix jacchus]
Length = 572
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG+++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAMLHIKKQSVLSVAAEGVNVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILK+IH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKIIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K KI+P F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLKIAPKYLFFLEEKQKLIQENPEVWFIRPVSPSLL 304
>gi|76155267|gb|AAX26526.2| SJCHGC09040 protein [Schistosoma japonicum]
Length = 303
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 315 QCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALL-------T 367
Q K+FY D+K+++ F+KI+EV+ D + +I +++ ++D L L+ +
Sbjct: 50 QVQKKRFYVDVKKNRRGIFMKIAEVSSDGRKARILLTLQAAVEIKDKLKDLIDVLEEIKS 109
Query: 368 AHQNTPRHRYRDTHT---------IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGG 418
+N+ +T T IKS V+ RRYFLDLK N R F+ ++ +L
Sbjct: 110 TDENSAALNSDETKTPELQVANSLIKSHVVNYPYRRYFLDLKRNKRGHFLRLT-MLSTMN 168
Query: 419 KLSSIAFPAQDLGPIIGLISD-LQQEHSCPEDEDGA----PEGNYMRCNNKRFFFNVSKN 473
++ IA P+Q + + I++ L + E D PE +R +N+ +F+ S N
Sbjct: 169 RI-QIAIPSQGMLDLYNAINEMLGKWWDGSEANDNKSVNLPESKSLRFDNRTLYFDSSFN 227
Query: 474 GKGTFMRISEISTPSKVLTNIGIKS 498
G ++RISE+ T S+ I +S
Sbjct: 228 RFGAYLRISEVRTASRTAITIPGRS 252
>gi|350596651|ref|XP_003361459.2| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like,
partial [Sus scrofa]
Length = 328
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM + +S + + EG ++ GK+ + +A N ++++FD+ F+ L
Sbjct: 120 QKFGAAMLHVKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDILLLGSRAFNNGL 178
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 179 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 234
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ KI+P +F + Q +ENP +W TRPL+ +L
Sbjct: 235 ISTLQESLIRHLKIAPKYLSFLEERQKRIQENPELWFTRPLSPSLL 280
>gi|426234083|ref|XP_004011034.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Ovis
aries]
Length = 785
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 358 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 416
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 417 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---VETGGFLPNC 472
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ KI+P + F + Q ++NP +W TRPL+ +L
Sbjct: 473 ISTLQESLIRHLKIAPKHLSFLEVRQKWIQKNPELWFTRPLSPSLL 518
>gi|297743128|emb|CBI35995.3| unnamed protein product [Vitis vinifera]
Length = 367
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL----HEVLESDRILK 96
+G D EG+DL G + ++ LA + I++ D I KL LES I K
Sbjct: 88 IGFDCEGVDLCRHGSLCIMQLAFPDA-IYLVDA-----IQGGEKLMKACKPALESSYITK 141
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
VIH D+ L F I+L NV D+Q A++ ++ R S D +GL ++
Sbjct: 142 VIHDCKRDSEALYFQFGIKLHNVVDSQIAYSLIEEQQGRRRSPDDYISFVGLLADPRYCG 201
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
IS KK ++ L +++P W RPL+ M+ AA DV L ++++M +E
Sbjct: 202 ISYLE-KKEVRVLLKQDPKFWTYRPLSELMVRAAADDVRFLPYIYYKMMEE 251
>gi|225442373|ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263418 [Vitis vinifera]
Length = 336
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL----HEVLESDRILK 96
+G D EG+DL G + ++ LA + I++ D I KL LES I K
Sbjct: 57 IGFDCEGVDLCRHGSLCIMQLAFPDA-IYLVDA-----IQGGEKLMKACKPALESSYITK 110
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
VIH D+ L F I+L NV D+Q A++ ++ R S D +GL ++
Sbjct: 111 VIHDCKRDSEALYFQFGIKLHNVVDSQIAYSLIEEQQGRRRSPDDYISFVGLLADPRYCG 170
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
IS KK ++ L +++P W RPL+ M+ AA DV L ++++M +E
Sbjct: 171 ISYLE-KKEVRVLLKQDPKFWTYRPLSELMVRAAADDVRFLPYIYYKMMEE 220
>gi|168010031|ref|XP_001757708.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690984|gb|EDQ77348.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 294
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G++ ++ LA + + V +M KL LES ++KV H
Sbjct: 14 IGFDCEGVDLARYGRLCIMQLAFDDAVYLVDAVMGGNSLMQACKLG--LESPYVIKVCHD 71
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL--KFYKIS 158
D+ L + I+L NV+DTQ A+T L+ + D I DLL + Y
Sbjct: 72 CKRDSEALYFQYGIKLNNVFDTQIAYTLLKEQHGKKWVPD---DYISFVDLLADERYCGM 128
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYA-LKQNRLLL 217
+ K+ ++ L R++P W RP T M AA DV LL ++ RM K L + RL +
Sbjct: 129 IYDEKEEVRVLLRKDPQFWAHRPWTVMMKRVAADDVRFLLRIYERMVKSLTELSKWRLSV 188
Query: 218 DNLIYETLF 226
+ +Y F
Sbjct: 189 RSSLYCQCF 197
>gi|443691503|gb|ELT93333.1| hypothetical protein CAPTEDRAFT_224359 [Capitella teleta]
Length = 268
Score = 72.4 bits (176), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVY 74
++NR + V + T+L+ S +++ D + L+++ +NG +FIFDV
Sbjct: 24 IINRVDSCVKVVQKLLKSNTVLSLSIKHIEIHPWD------IVLIAVGERNGNVFIFDVK 77
Query: 75 SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
+CP I+ +G+L ++ +D + KV+H L + +RL NV+DTQ AF L
Sbjct: 78 TCPAIVHEGQLWRIIIADALPKVMHDCRRSGSSLQRQYQLRLCNVFDTQAAFCLL----- 132
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI-WKTRPLTSDMLLYAAAD 193
++ + L P I L DL + ++Q I W RP++S ++ A +
Sbjct: 133 -MMEKQLPPRLISLRDLYEKCGDPGRRMSTSLQEADGVGGGIYWAQRPMSSHLVQSLATE 191
Query: 194 VESLLALFH 202
+ +LL H
Sbjct: 192 LRTLLPNLH 200
>gi|242057747|ref|XP_002458019.1| hypothetical protein SORBIDRAFT_03g025580 [Sorghum bicolor]
gi|241929994|gb|EES03139.1| hypothetical protein SORBIDRAFT_03g025580 [Sorghum bicolor]
Length = 340
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-----LHEVLESDRIL 95
+G D EG+DL +G + ++ LA + +++ D GK LESD I
Sbjct: 54 IGFDCEGVDLCRNGALCIMQLAFPDA-VYLVDAIE------GGKELIQACKPALESDHIT 106
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP---RLLSQDLVPHTIGLNDLL 152
KVIH D+ L F I+L NV DTQ A++ +Q + + S D + I LL
Sbjct: 107 KVIHDCKRDSEALYFQFGIKLHNVMDTQIAYSLIQEQEQEGKKKTSDDY--NYISFVSLL 164
Query: 153 ---KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+F I P K+ ++ L R++P+ W RPL+ M+ A DV LL ++ +M
Sbjct: 165 ADKRFCGI-PYPEKEEVRTLLRQDPNFWTIRPLSDMMVRAATDDVRFLLNIYEKM 218
>gi|357135256|ref|XP_003569227.1| PREDICTED: uncharacterized protein LOC100838477 [Brachypodium
distachyon]
Length = 332
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL +G + ++ +A + I++ D + + LES+ ++KVIH
Sbjct: 50 IGFDCEGVDLCRNGALCIMQIAFPDA-IYLVDAIEGGKELIEA-CKPALESEYVIKVIHD 107
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL--KFYKIS 158
D+ L F I+L NV DTQ A++ ++ + + + D+ I LL Y
Sbjct: 108 CKRDSEALYFQFGIKLHNVMDTQIAYSLIEEQEGKKRAYDV---YISFVSLLADPRYCGM 164
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
P K+ ++ L R++P+ WK RPL+ M+ A DV LL + +M
Sbjct: 165 PYPEKEEVRTLLRQDPNFWKNRPLSEMMIRAATDDVRFLLNIHEKM 210
>gi|226533369|ref|NP_001143931.1| hypothetical protein [Zea mays]
gi|194696098|gb|ACF82133.1| unknown [Zea mays]
gi|195629726|gb|ACG36504.1| hypothetical protein [Zea mays]
gi|414881480|tpg|DAA58611.1| TPA: hypothetical protein ZEAMMB73_336636 [Zea mays]
Length = 344
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 44/244 (18%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-----LHEVLESDRIL 95
+G D EG+DL +G + ++ LA + +++ D GK LESD I
Sbjct: 58 IGFDCEGVDLCRNGALCIMQLAFPDA-VYLVDAIE------GGKELIQACKPALESDHIT 110
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL---LSQDLVPHTIGLNDLL 152
KVIH D+ L F I+L NV DTQ A++ +Q + + S D + I LL
Sbjct: 111 KVIHDCKRDSEALYFQFGIKLHNVMDTQIAYSLIQEQEQKGKKKTSDDY--NYISFVSLL 168
Query: 153 --KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYAL 210
K Y P K+ ++ L R++P+ W RPL+ M+ A DV LL ++ +M +
Sbjct: 169 ADKRYCGIPYPEKEEVRILLRQDPNFWTIRPLSDMMVRAATDDVRFLLNIYEKMME---- 224
Query: 211 KQNRLLLDNL-IYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYP-------YI 262
K N++ L L + L+ LN NQ W S P P Y+
Sbjct: 225 KLNKVSLWRLAVRSELYCRCFCLN--------DNQFADW-----SPLPPVPDGIEADVYV 271
Query: 263 EEVN 266
EV+
Sbjct: 272 PEVD 275
>gi|432139905|gb|AGB05890.1| 3'-5' exonuclease, partial [Plasmodium vinckei vinckei]
Length = 191
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C MF L E+ E+ I+KV H
Sbjct: 52 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYMFAKYLKELFENKNIIKVTH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 110 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 163
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 164 NNHKIYFHKIISLDNKIYLKRPISKELI 191
>gi|148696007|gb|EDL27954.1| Vexonuclease 3'-5' domain-like 1 [Mus musculus]
gi|187957716|gb|AAI50663.1| Exonuclease 3'-5' domain-like 1 [Mus musculus]
gi|219519197|gb|AAI44751.1| Exdl1 protein [Mus musculus]
Length = 570
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 143 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 201
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 202 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLNNVFDTQVA-DVLQFS---METGGFLPNC 257
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P F + Q +ENP IW TRPL +L
Sbjct: 258 ISTLQESLIRHLKVAPRYLFFLEERQKRIQENPEIWLTRPLPPSLL 303
>gi|27370298|ref|NP_766445.1| exonuclease 3'-5' domain-containing protein 1 [Mus musculus]
gi|81914299|sp|Q8CDF7.1|EXD1_MOUSE RecName: Full=Exonuclease 3'-5' domain-containing protein 1;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 1
gi|26326111|dbj|BAC26799.1| unnamed protein product [Mus musculus]
gi|111598629|gb|AAH92241.1| Exonuclease 3'-5' domain-like 1 [Mus musculus]
Length = 570
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 143 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 201
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 202 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLNNVFDTQVA-DVLQFS---METGGFLPNC 257
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L++ K++P F + Q +ENP IW TRPL +L
Sbjct: 258 ISTLQESLIRHLKVAPRYLFFLEERQKRIQENPEIWLTRPLPPSLL 303
>gi|255074453|ref|XP_002500901.1| predicted protein [Micromonas sp. RCC299]
gi|226516164|gb|ACO62159.1| predicted protein [Micromonas sp. RCC299]
Length = 316
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 7 PQNNLLRTLMNRTNLITDVQEAQSAMATILNESK-VGLDLEGMDLGVDGKVSLVSLALQN 65
P L + R L+ D AM ++ + +D EG+ L G +SL +A N
Sbjct: 64 PPERPLTSTPPRVILLDDPGSCADAMRELIARGEPCAVDFEGVALSRTGAISLAQVAPPN 123
Query: 66 GKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
G +++ DV FD G+L E+L + LK++ GDA L F +R++ V+D Q
Sbjct: 124 GPVYLVDVACMGAAAFDEGRLGELLGATHPLKLVFDCRGDADALHHQFGVRMRGVFDVQV 183
Query: 125 AFTALQLSD------PRLLS-QDLVPHTIGLND-----LLKFYKISPNNFKKNIQNLYRE 172
AF + D L+ + + GL+D L + F + Y
Sbjct: 184 AFCLKKDVDHGGKRGAYLMGLRKALKECPGLDDEARHELDAVKSAGASLFAPELGGSY-- 241
Query: 173 NPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEY 208
W RP+ D++ YAAADV + L HR + +
Sbjct: 242 --DAWTKRPMHPDLVKYAAADV-TYLHHMHRTWRGF 274
>gi|355692623|gb|EHH27226.1| Exonuclease 3'-5' domain-like-containing protein 1 [Macaca mulatta]
Length = 514
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W TRP++ +L
Sbjct: 201 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFTRPVSPSLL 246
>gi|428186343|gb|EKX55193.1| hypothetical protein GUITHDRAFT_62690 [Guillardia theta CCMP2712]
Length = 301
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQ---NGKI-FIFDVYSCP----LIMFDGKLHEVLESD 92
+ D EG++L G V+L+ A+ G++ F+ D+ S P L F +VLE +
Sbjct: 45 LAWDCEGVNLSRIGSVTLIQFAIDREDGGQLCFLLDMLS-PIKDQLFAF---AKQVLEDE 100
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
+LKVIH DA LL I + NV+DTQ A ++ R S+ LN L
Sbjct: 101 SVLKVIHDPAADADCLLHCHGITVVNVHDTQ----AWHMTLRRCYSRP------NLNLTL 150
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
+ + + N K N Y+ NP W +RPLT M+ A DV + + L+
Sbjct: 151 EAWNLPLNTHKNASFNPYKSNPAYWASRPLTETMIQVAGGDVYTTIPLY 199
>gi|156093870|ref|XP_001612973.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax
Sal-1]
gi|148801847|gb|EDL43246.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax]
Length = 428
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 25 VQEAQSAM-ATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFD 82
VQE Q + A +N +GLD+EG +G +G VS++ + Q+ +++FD+Y C +F
Sbjct: 85 VQEIQKGVQAGKIN--CIGLDVEGYKIGRNGTVSIIQVCTQD--VYLFDLYKCDNSYLFV 140
Query: 83 GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
L E+LE R++K+ H D L + ++I L +DTQ AF L + L Q
Sbjct: 141 KCLKELLEDRRVIKITHDCREDCSILFNQYSICLNRTFDTQVAFNLLLKETKKDLYQ--- 197
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
I +DLL + N K + + I+ RP+ +++ YA DV
Sbjct: 198 ---ISYDDLLYKCLLLNNKHKIYFHKMISLDQKIYLKRPIAKELIQYAIQDV 246
>gi|157820709|ref|NP_001101231.1| exonuclease 3'-5' domain-containing protein 1 [Rattus norvegicus]
gi|149023013|gb|EDL79907.1| exonuclease 3'-5' domain-like 1 (predicted) [Rattus norvegicus]
Length = 562
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 143 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 201
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 202 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLSNVFDTQVA-DVLQFS---METGGFLPNC 257
Query: 146 IG-LND-LLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
I L + L++ K++P F + Q +ENP +W TRPL +L
Sbjct: 258 ISTLQECLIRHLKVAPKYLLFLEERQKQIQENPEVWLTRPLPPSLL 303
>gi|432139929|gb|AGB05902.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 193
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 54 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 111
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 112 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 165
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 166 NNHKIYFHKIISLDNKIYLKRPISKELI 193
>gi|449450328|ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214970 [Cucumis sativus]
gi|449522022|ref|XP_004168027.1| PREDICTED: uncharacterized protein LOC101223734 [Cucumis sativus]
Length = 340
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEV----LESDRILK 96
VG D EG+DL G + ++ +A + +++ D + +L +V LES + K
Sbjct: 58 VGFDCEGVDLCRHGNLCVMQIAFPDA-VYLVDA-----VQGGEELVKVCKPALESKYVTK 111
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
VIH D+ L F I+L NV DTQ A++ L+ + R + D + I LL +
Sbjct: 112 VIHDCKRDSEALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPD---NYISFVSLLADSR 168
Query: 157 ISPNNF--KKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ K+ ++ L R++P W RP++ M+ AA DV LL ++H+M
Sbjct: 169 YCGVSYVEKEEVRLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKM 218
>gi|432139925|gb|AGB05900.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 193
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 54 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 111
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 112 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 165
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 166 NNHKIYFHKIISLDNKIYLKRPISKELI 193
>gi|432139921|gb|AGB05898.1| 3'-5' exonuclease, partial [Plasmodium yoelii]
gi|432139923|gb|AGB05899.1| 3'-5' exonuclease, partial [Plasmodium yoelii]
gi|432139937|gb|AGB05906.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
gi|432139941|gb|AGB05908.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 194
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 113 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 166
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 167 NNHKIYFHKIISLDNKIYLKRPISKELI 194
>gi|403346454|gb|EJY72625.1| 3'-5' exonuclease domain containing protein [Oxytricha trifallax]
Length = 661
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 2 EAKCQPQNNLLRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSL 61
+++ QPQN L L N + I +G+D EG L +SLV +
Sbjct: 72 QSQIQPQNANLFLLQNYESCII-----------------LGVDCEG--LSRTQPLSLVQI 112
Query: 62 ALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYD 121
++ K F+FD+ L L VLE I+K+ H D L+ +N+ V+D
Sbjct: 113 GNED-KCFLFDILK--LNGLPKCLKNVLEDPDIIKIFHDFCEDTAALVQQYNVHCDRVFD 169
Query: 122 TQCAFTALQLSDPRLLSQDLVP---HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWK 178
TQ A R+++QD I LN LLK Y N+ K+ I + ++ P W
Sbjct: 170 TQIAH--------RIINQDSDEPRDQNISLNHLLKEYIQVENDQKETICSYMKKEPGFWW 221
Query: 179 TRPLTSDMLLYAAADVESLLALFHRMTKEYALK 211
RPL+ M YAA DV L +++ M + + L+
Sbjct: 222 QRPLSQIMQEYAAQDVIFLPSVYGTMMRNFFLE 254
>gi|17541718|ref|NP_501241.1| Protein PLP-1 [Caenorhabditis elegans]
gi|351049727|emb|CCD63777.1| Protein PLP-1 [Caenorhabditis elegans]
Length = 226
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLT--AHQNTPRHR 376
K++Y D+ ++ ++IKI+E+ + +++I +S+ + ++ +L +T H
Sbjct: 27 KRYYIDVNENTRGRYIKIAELGTN-YKSRIILSIVAAKAIVSEISKMLALIDEPSTGEHA 85
Query: 377 YRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS--SIAFPAQDLGPII 434
+++ IKSE L D R++++DLK+N R RF+ I+Q +P+ + + IA P+ + I
Sbjct: 86 PKESSLIKSETLNVDGRKFYVDLKENVRGRFLRIAQ-MPMNPRQTRQQIAIPSDGIAEIH 144
Query: 435 GLISD-LQQEHSCPEDED-GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
++++ L + E E+ P+ + NK F F+ KN +G F+RISEI
Sbjct: 145 KVLTEYLAKFGEGHEQENTNTPK---ITAENKSFLFHSGKNDRGEFVRISEI 193
>gi|432139897|gb|AGB05886.1| 3'-5' exonuclease, partial [Plasmodium vinckei]
gi|432139899|gb|AGB05887.1| 3'-5' exonuclease, partial [Plasmodium vinckei]
Length = 193
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 54 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 111
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 112 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 165
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 166 NNHKIYFHKIISLDNKIYLKRPISKELI 193
>gi|432139907|gb|AGB05891.1| 3'-5' exonuclease, partial [Plasmodium vinckei vinckei]
Length = 190
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C MF L E+ E+ I+KV H
Sbjct: 54 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYMFAKYLKELFENKNIIKVTH 111
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 112 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 171
>gi|432139913|gb|AGB05894.1| 3'-5' exonuclease, partial [Plasmodium yoelii killicki]
Length = 194
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G +S++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGKNGTISIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 113 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 166
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 167 NNHKIYFHKIISLDNKIYLKRPISKELI 194
>gi|432139855|gb|AGB05865.1| 3'-5' exonuclease, partial [Plasmodium chabaudi adami]
Length = 193
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 54 IGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYKCDNSYLFVKYLKELFENKNIIKVAH 111
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 112 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 165
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDML 187
NN K + + I+ RP++ +++
Sbjct: 166 NNHKIYFHKIISLDNKIYLKRPISKELI 193
>gi|432139871|gb|AGB05873.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139881|gb|AGB05878.1| 3'-5' exonuclease, partial [Plasmodium chabaudi]
Length = 191
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 22 ITDVQEAQSAMATI----LNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I +NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 27 INDSKECKKYINEIEKNVMNENLKIIGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYK 84
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 85 CDNSYLFVKYLKELFENKNIIKVAHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 144
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
+ L Q I +DLL NN K + + I+ RP++ +++
Sbjct: 145 KELYQ------ISYDDLLYKCLFLNNNHKIYFHKIISLDNKIYLKRPISKELI 191
>gi|432139893|gb|AGB05884.1| 3'-5' exonuclease, partial [Plasmodium vinckei petteri]
Length = 166
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 29 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 86
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 87 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 140
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSD 185
NN K + + I+ RP++ +
Sbjct: 141 NNHKIYFHKIISLDNKIYLKRPISKE 166
>gi|226491678|ref|NP_001141141.1| hypothetical protein [Zea mays]
gi|194702850|gb|ACF85509.1| unknown [Zea mays]
gi|413950404|gb|AFW83053.1| hypothetical protein ZEAMMB73_414768 [Zea mays]
Length = 339
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 39/246 (15%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-----LHEVLESDRIL 95
+G D EG+DL +G + ++ LA + +++ D GK LESD I
Sbjct: 53 IGFDCEGVDLCRNGALCIMQLAFPDA-VYLVDAIE------GGKELIQACKPALESDHIT 105
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP---RLLSQDLVPHTIGLNDLL 152
KVIH D+ L F I+L NV DTQ A++ ++ + ++ S D + I LL
Sbjct: 106 KVIHDCKRDSEALYFQFGIKLHNVMDTQIAYSLIEEQEQEGKKMTSDDY--NYISFVSLL 163
Query: 153 --KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYA- 209
K Y K+ ++ L R++P+ W RPL+ M+ A DV LL+++ +M ++ +
Sbjct: 164 ADKRYCGILYPEKEEVRTLLRQDPNFWTIRPLSDMMVRAATDDVRFLLSIYAKMMEKLSK 223
Query: 210 LKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYIEEVNSNE 269
+ RL + + +Y F NQ W S P P +++ ++
Sbjct: 224 VSLWRLAVRSELYCRCFC------------LSDNQFADW-----SPLPPVP--DDIEADV 264
Query: 270 YIWRND 275
Y+ D
Sbjct: 265 YVPEAD 270
>gi|297296193|ref|XP_002804776.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 2
[Macaca mulatta]
Length = 572
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 304
>gi|432139931|gb|AGB05903.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 184
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 22 ITDVQEAQSAM----ATILNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I+NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 28 INDSKECKKYINEIEQNIMNENLKIIGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYK 85
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 86 CDNSYLFAKYLKELFENKNIIKVTHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 145
Query: 135 RLLSQ----DLVPHTIGLNDLLKFY 155
+ L Q DL+ + LN+ K Y
Sbjct: 146 KELYQISYDDLLYKCLFLNNNHKIY 170
>gi|432139935|gb|AGB05905.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 185
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 22 ITDVQEAQSAM----ATILNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I+NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 29 INDSKECKKYINEIEQNIMNENLKIIGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYK 86
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 87 CDNSYLFAKYLKELFENKNIIKVTHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 146
Query: 135 RLLSQ----DLVPHTIGLNDLLKFY 155
+ L Q DL+ + LN+ K Y
Sbjct: 147 KELYQISYDDLLYKCLFLNNNHKIY 171
>gi|109080718|ref|XP_001099755.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 1
[Macaca mulatta]
Length = 514
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|297696371|ref|XP_002825370.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 1
[Pongo abelii]
Length = 572
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 304
>gi|432139883|gb|AGB05879.1| 3'-5' exonuclease, partial [Plasmodium vinckei brucechwatti]
Length = 187
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 51 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 108
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 109 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 168
>gi|432139927|gb|AGB05901.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 190
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 113 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 166
Query: 160 NNFKKNIQNLYRENPHIWKTRPLT 183
NN K + + I+ RP++
Sbjct: 167 NNHKIYFHKIISLDNKIYLKRPIS 190
>gi|432139891|gb|AGB05883.1| 3'-5' exonuclease, partial [Plasmodium vinckei petteri]
Length = 189
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 52 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 110 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 163
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSD 185
NN K + + I+ RP++ +
Sbjct: 164 NNHKIYFHKIISLDNKIYLKRPISKE 189
>gi|432139911|gb|AGB05893.1| 3'-5' exonuclease, partial [Plasmodium yoelii nigeriensis]
Length = 188
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 52 IGLDVEGYKIGKNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 110 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 169
>gi|432139889|gb|AGB05882.1| 3'-5' exonuclease, partial [Plasmodium vinckei lentum]
Length = 191
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + + L Q DL+ + LN+ K Y
Sbjct: 113 DCREDCSILYNQYNINLNNIFDTQIAYNLILKNSKKELYQISYDDLLYKCLFLNNNHKIY 172
>gi|395746579|ref|XP_003778478.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 2
[Pongo abelii]
Length = 514
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|432139933|gb|AGB05904.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 184
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 53 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 110
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 111 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 170
>gi|432139895|gb|AGB05885.1| 3'-5' exonuclease, partial [Plasmodium vinckei]
Length = 188
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 52 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 110 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 169
>gi|432139915|gb|AGB05895.1| 3'-5' exonuclease, partial [Plasmodium yoelii killicki]
Length = 191
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 22 ITDVQEAQSAM----ATILNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + ++NE+ +GLD+EG +G +G +S++ + ++ I+IFD+Y
Sbjct: 30 INDSKECKKYINEIEQNVMNENLKIIGLDIEGYKIGKNGTISIIQICAKD--IYIFDLYK 87
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 88 CDNSYLFAKYLKELFENKNIIKVTHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 147
Query: 135 RLLSQ----DLVPHTIGLNDLLKFY 155
+ L Q DL+ + LN+ K Y
Sbjct: 148 KELYQISYDDLLYKCLFLNNNHKIY 172
>gi|432139887|gb|AGB05881.1| 3'-5' exonuclease, partial [Plasmodium vinckei lentum]
Length = 187
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + + L Q DL+ + LN+ K Y
Sbjct: 113 DCREDCSILYNQYNINLNNIFDTQIAYNLILKNSKKELYQISYDDLLYKCLFLNNNHKIY 172
>gi|432139939|gb|AGB05907.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 151
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 16 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 73
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 74 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLLYKCLFLN 127
Query: 160 NNFKKNIQNLYRENPHIWKTRPLT 183
NN K + + I+ RP++
Sbjct: 128 NNHKIYFHKIISLDNKIYLKRPIS 151
>gi|355777956|gb|EHH62992.1| Exonuclease 3'-5' domain-like-containing protein 1 [Macaca
fascicularis]
Length = 514
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|432139885|gb|AGB05880.1| 3'-5' exonuclease, partial [Plasmodium vinckei brucechwatti]
Length = 186
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 22 ITDVQEAQSAMATI----LNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I +NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 26 INDSKECKKYINEIEKNAMNENLKIIGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYK 83
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 84 CDNSYLFAKYLKELFENKNIIKVTHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 143
Query: 135 RLLSQ----DLVPHTIGLNDLLKFY 155
+ L Q DL+ + LN+ K Y
Sbjct: 144 KELYQISYDDLLYKCLFLNNNHKIY 168
>gi|432139943|gb|AGB05909.1| 3'-5' exonuclease, partial [Plasmodium yoelii yoelii]
Length = 146
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 35 ILNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLES 91
++NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+
Sbjct: 7 VMNENXKIIGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFEN 64
Query: 92 DRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIG 147
I+KV H D L + +NI L N++DTQ A+ + + L Q DL+ +
Sbjct: 65 KNIIKVTHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLF 124
Query: 148 LNDLLKFY 155
LN+ K Y
Sbjct: 125 LNNNHKIY 132
>gi|432139919|gb|AGB05897.1| 3'-5' exonuclease, partial [Plasmodium yoelii]
Length = 184
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 55 IGLDIEGYKIGRNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 112
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 113 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 172
>gi|224088954|ref|XP_002308585.1| predicted protein [Populus trichocarpa]
gi|222854561|gb|EEE92108.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 25 VQEAQSAMATILNESK-----VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
V E LN S +G D EG++L G + ++ LA + I++ D +
Sbjct: 34 VTEPSQLPVEFLNPSAAKQLIIGFDCEGVNLCRHGALCIMQLAFPDA-IYLVDAIN---- 88
Query: 80 MFDGK-----LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
G+ LES I KVIH D+ L F I+L NV DTQ A++ ++ +
Sbjct: 89 --GGESLIKVCKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDTQIAYSLIEEQEG 146
Query: 135 RL-LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
R L D + +GL ++ +S K+ ++ L R++P W RPL+ M+ AA D
Sbjct: 147 RTRLPGDYI-SFVGLLADPRYCGVSYLE-KEEVRVLLRQDPMFWTYRPLSEMMIRAAADD 204
Query: 194 VESLLALFHRMTK 206
V LL ++++M +
Sbjct: 205 VRFLLCIYYKMME 217
>gi|432139857|gb|AGB05866.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139861|gb|AGB05868.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139863|gb|AGB05869.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139865|gb|AGB05870.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139873|gb|AGB05874.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139879|gb|AGB05877.1| 3'-5' exonuclease, partial [Plasmodium chabaudi]
Length = 188
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 22 ITDVQEAQSAMATI----LNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I +NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 27 INDSKECKKYINEIEKNVMNENLKIIGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYK 84
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 85 CDNSYLFVKYLKELFENKNIIKVAHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 144
Query: 135 RLLSQ----DLVPHTIGLNDLLKFY 155
+ L Q DL+ + LN+ K Y
Sbjct: 145 KELYQISYDDLLYKCLFLNNNHKIY 169
>gi|432139901|gb|AGB05888.1| 3'-5' exonuclease, partial [Plasmodium vinckei]
Length = 188
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 52 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 110 DCREDCSILYNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 169
>gi|432139903|gb|AGB05889.1| 3'-5' exonuclease, partial [Plasmodium vinckei]
Length = 187
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 51 IGLDIEGYKIGKNGTVSIIQVCAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 108
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 109 DCREDCSILYNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 168
>gi|432139877|gb|AGB05876.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
Length = 187
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 ITDVQEAQSAMATI----LNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I +NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 26 INDSKECKKYINEIEKNVMNENLKIIGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYK 83
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 84 CDNSYLFVKYLKELFENKNIIKVAHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 143
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
+ L Q I +DLL NN K + + I+ RP++
Sbjct: 144 KELYQ------ISYDDLLYKCLFLNNNHKIYFHKIISLDNKIYLKRPIS 186
>gi|432139859|gb|AGB05867.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139867|gb|AGB05871.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
gi|432139909|gb|AGB05892.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
Length = 188
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 52 IGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYKCDNSYLFVKYLKELFENKNIIKVAH 109
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ----DLVPHTIGLNDLLKFY 155
D L + +NI L N++DTQ A+ + + L Q DL+ + LN+ K Y
Sbjct: 110 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQISYDDLLYKCLFLNNNHKIY 169
>gi|432139869|gb|AGB05872.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
Length = 188
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 22 ITDVQEAQSAMATI----LNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I +NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 27 INDSKECKKYINEIEKNVMNENLKIIGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYK 84
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 85 CDNSYLFVKYLKELFENKNIIKVAHDCREDCSILFNQYNINLNNIFDTQIAYNLILKRSK 144
Query: 135 RLLSQ----DLVPHTIGLNDLLKFY 155
+ L Q DL+ + LN+ K Y
Sbjct: 145 KELYQISYDDLLYKCLFLNNNHKIY 169
>gi|432139875|gb|AGB05875.1| 3'-5' exonuclease, partial [Plasmodium chabaudi chabaudi]
Length = 187
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 ITDVQEAQSAMATI----LNESK--VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS 75
I D +E + + I +NE+ +GLD+EG +G +G VS++ + ++ I+IFD+Y
Sbjct: 27 INDSKECKKYINEIEKNVMNENLKIIGLDIEGYKIGRNGTVSIIQVCAKD--IYIFDLYK 84
Query: 76 CP-LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
C +F L E+ E+ I+KV H D L + +NI L N++DTQ A+ +
Sbjct: 85 CDNSYLFVKYLKELFENKNIIKVAHDCREDCSILFNQYNINLNNIFDTQIAYNLILKKSK 144
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
+ L Q I +DLL NN K + + I+ RP++
Sbjct: 145 KELYQ------ISYDDLLYKCLFLNNNHKIYFHKIISLDNKIYLKRPIS 187
>gi|332235202|ref|XP_003266794.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Nomascus
leucogenys]
Length = 514
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANMCRHGKLCWLQVA-TNCRVYLFDIFLLGSGAFNNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE +ILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKKILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K K++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLKVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|311275811|ref|XP_003134923.1| PREDICTED: transcriptional activator protein Pur-beta-like [Sus
scrofa]
Length = 239
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 40/184 (21%)
Query: 344 TRNQIHISMSVVGHLRDHLNALLTAHQ----NTPRH---------RYRDTHTIKSEVLIK 390
++ ++ +SM+V RD+L + + ++P +KSE L++
Sbjct: 3 SQARLTLSMAVAAEFRDYLGDFIEHYAQLGPSSPEQVAAAAGAEEGGGPRRALKSEFLVR 62
Query: 391 DTRRYFLDLKDNGRARFVTISQLLPVGGKL---------SSIAFPAQDLGPIIGLISDLQ 441
+ R+Y+LDLK+N R RF+ I Q + GG +IA PAQ L ++ L
Sbjct: 63 ENRKYYLDLKENQRGRFLRIRQTVNRGGGGPGPGGLQSGQTIALPAQGLIEFRDALAKLI 122
Query: 442 QEHSCPEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
++ +DE PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 123 DDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEV 182
Query: 485 STPS 488
PS
Sbjct: 183 K-PS 185
>gi|221044296|dbj|BAH13825.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 304
>gi|426378717|ref|XP_004056059.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 572
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 304
>gi|297597041|ref|NP_001043365.2| Os01g0566900 [Oryza sativa Japonica Group]
gi|52076246|dbj|BAD45014.1| egalitarian-like [Oryza sativa Japonica Group]
gi|125526475|gb|EAY74589.1| hypothetical protein OsI_02478 [Oryza sativa Indica Group]
gi|215712371|dbj|BAG94498.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673376|dbj|BAF05279.2| Os01g0566900 [Oryza sativa Japonica Group]
Length = 307
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ +A + +++ D + + LES+ + KVIH
Sbjct: 25 IGFDCEGVDLCRHGALCIMQIAFPDA-VYLVDAIEGGKELIEA-CKPALESEYVTKVIHD 82
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ L+ + + D I LL +
Sbjct: 83 CKRDSEALYFQFGIKLHNVMDTQIAYSLLEEQEGKKRGYD---EYISFVSLLADPRYCGM 139
Query: 161 NF--KKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ K+ ++ L R++P+ W RPL+ M+ A DV LL++ +M
Sbjct: 140 AYPEKEEVRTLLRQDPNFWTHRPLSEMMIRAATDDVRFLLSIHEKM 185
>gi|123983340|gb|ABM83411.1| exonuclease 3'-5' domain-like 1 [synthetic construct]
gi|123998041|gb|ABM86622.1| exonuclease 3'-5' domain-like 1 [synthetic construct]
Length = 475
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 47 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 105
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 106 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 161
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 162 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 207
>gi|34303939|ref|NP_689809.2| exonuclease 3'-5' domain-containing protein 1 [Homo sapiens]
gi|317373564|sp|Q8NHP7.4|EXD1_HUMAN RecName: Full=Exonuclease 3'-5' domain-containing protein 1;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 1
gi|34192161|gb|AAH30628.2| Exonuclease 3'-5' domain containing 1 [Homo sapiens]
Length = 514
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|158258485|dbj|BAF85213.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|341899969|gb|EGT55904.1| hypothetical protein CAEBREN_09428 [Caenorhabditis brenneri]
Length = 574
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 11 LLRTLMNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGKVSL-VSLAL 63
L ++ + R + + ++ AQ +A + + + VGLDL+ + +GVDG++ L + +
Sbjct: 282 LDQSSLTRIHFVKALKPAQDLIARLWQDINNMEKKVVGLDLKTVTVGVDGEIFLSLGVIA 341
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+I IFD+ S +I+ + +LES++++KVIH A A L + + ++NV+DTQ
Sbjct: 342 TTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVFDTQ 401
Query: 124 CAFTALQ-------LSDPRLLS-----QDLVPHTIGLNDLL-KFYKISPNNFKKNIQNLY 170
A + LQ L D R +S + P +I L+D+ + SPN
Sbjct: 402 VAHSLLQHDKFGKSLHDMRPISFINLQRVYYPQSIMLSDVTPRKMSQSPN---------- 451
Query: 171 RENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
W RP+T + L + LL AL+ ++
Sbjct: 452 ------WGVRPITEEFQLTIVEEAHCLLSALYQALS 481
>gi|432139917|gb|AGB05896.1| 3'-5' exonuclease, partial [Plasmodium yoelii nigeriensis]
Length = 160
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCP-LIMFDGKLHEVLESDRILKVIH 99
+GLD+EG +G +G VS++ + ++ I+IFD+Y C +F L E+ E+ I+KV H
Sbjct: 54 IGLDVEGYKIGKNGTVSIIQICAKD--IYIFDLYKCDNSYLFAKYLKELFENKNIIKVTH 111
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
D L + +NI L N++DTQ A+ + + L Q I +DLL
Sbjct: 112 DCREDCSILFNQYNINLNNIFDTQIAYNLILKKSKKELYQ------ISYDDLL 158
>gi|426378719|ref|XP_004056060.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 514
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|119612879|gb|EAW92473.1| exonuclease 3'-5' domain-like 1 [Homo sapiens]
Length = 514
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|326920474|ref|XP_003206497.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Meleagris gallopavo]
Length = 322
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 46 EGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDA 105
EG++L +GK+S + +A ++ IF+FD++ F L VLE ILKV+H +
Sbjct: 80 EGVNLCRNGKLSWLQMATKS-HIFLFDIFLLGPQAFRNGLQTVLEDKNILKVMHDCRWIS 138
Query: 106 GGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH-TIGLNDLLKFYKISPNNFK- 163
L +N+ L NV+DTQ A LQ S + + PH T L + L + P+ +K
Sbjct: 139 DCLFHQYNVLLDNVFDTQVA-DVLQFS---VATGGFFPHCTCTLQECLMQHLKIPSKWKT 194
Query: 164 --KNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
K+ Q + ENP +W RP + + A LL L
Sbjct: 195 LMKHEQQMALENPDMWFLRPFPASLFQVLALKAMYLLLL 233
>gi|114656432|ref|XP_523055.2| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 2
[Pan troglodytes]
Length = 572
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 304
>gi|397512653|ref|XP_003826655.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 2
[Pan paniscus]
Length = 572
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFHNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 259 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 304
>gi|426228425|ref|XP_004008309.1| PREDICTED: transcriptional activator protein Pur-beta, partial
[Ovis aries]
Length = 235
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 41/182 (22%)
Query: 347 QIHISMSVVGHLRDHLNALLTAHQ----NTPRH---------RYRDTHTIKSEVLIKDTR 393
++ +SM+V RD+L + + ++P +KSE L+++ R
Sbjct: 1 RLTLSMAVAAEFRDYLGDFIEHYAQLGPSSPEQVAAAAGAEEGGGPRRALKSEFLVRENR 60
Query: 394 RYFLDLKDNGRARFVTISQLLPVGGKL---------SSIAFPAQDLGPIIGLISDLQQEH 444
+Y+LDLK+N R RF+ I Q + GG +IA PAQ L ++ L ++
Sbjct: 61 KYYLDLKENQRGRFLRIRQTVNRGGGGPGPGGLQSGQTIALPAQGLIEFRDALAKLIDDY 120
Query: 445 SCPEDE------------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEIST 486
+DE PEG + ++KRFFF+V N G F+R+SE+
Sbjct: 121 GGEDDELAGGPGGGAGGPGGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK- 179
Query: 487 PS 488
PS
Sbjct: 180 PS 181
>gi|114656434|ref|XP_001147941.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 1
[Pan troglodytes]
Length = 514
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVAT-NCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|402580291|gb|EJW74241.1| 3'-5' exonuclease [Wuchereria bancrofti]
Length = 256
Score = 67.0 bits (162), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 36 LNESKVGLDLEGMDLGVDGK--VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDR 93
+ E VG+D + + LGV G+ +SLV LA +I +FDV I+ + + E+LES++
Sbjct: 1 MEERVVGVDFKTVTLGVQGEEFLSLVVLA-TTMQIVVFDVVHSDTILLESGVKEILESEK 59
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
I+KVIH A A L + I L+ ++DTQ A T LQ D+ T+ +L +
Sbjct: 60 IIKVIHDAKRVATLLAHRYAINLRKIFDTQVAHTILQHEKFGKAVTDM--RTMSFVNLRR 117
Query: 154 FYKISPNNFKKNIQNLYRENPHI--WKTRPLTSDMLLYAAADVESLLALFHRM 204
Y P + + R+ H+ W RP+T D L+ + L+ + +RM
Sbjct: 118 VY--YPQSIMMS-DATPRKLTHLPSWGLRPITEDFLVTVVEEAHCLVTVLYRM 167
>gi|397512651|ref|XP_003826654.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform 1
[Pan paniscus]
Length = 514
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVAT-NCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDML 187
I L+K +++P +F + Q L +ENP +W RP++ +L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLL 246
>gi|222618694|gb|EEE54826.1| hypothetical protein OsJ_02264 [Oryza sativa Japonica Group]
Length = 504
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G + ++ +A + +++ D + + LES+ + KVIH
Sbjct: 222 IGFDCEGVDLCRHGALCIMQIAFPDA-VYLVDAIEGGKELIEA-CKPALESEYVTKVIHD 279
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F I+L NV DTQ A++ L+ + + D I LL +
Sbjct: 280 CKRDSEALYFQFGIKLHNVMDTQIAYSLLEEQEGKKRGYD---EYISFVSLLADPRYCGM 336
Query: 161 NF--KKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ K+ ++ L R++P+ W RPL+ M+ A DV LL++ +M
Sbjct: 337 AYPEKEEVRTLLRQDPNFWTHRPLSEMMIRAATDDVRFLLSIHEKM 382
>gi|294950345|ref|XP_002786583.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900875|gb|EER18379.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 387
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 7 PQNNL---LRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLAL 63
PQ +L +RT ++ ++++ + E +G+D EG+ LG G++ + +A
Sbjct: 5 PQLHLSAAIRTTPTSVAFVSSAEKSKEVALALAKEGVIGVDCEGVMLGRFGQLCTIQIAT 64
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ G F+FD ++ L +L +LKV H D+ L I L V+DTQ
Sbjct: 65 ERGDAFMFDACRPGVVQ---SLAPLLSDPSVLKVFHDCREDSSALYHQHGISLDCVFDTQ 121
Query: 124 CAFTALQLSDPRLLSQDLVPHTI--GLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRP 181
D + +LV + G ++ FK + E+P +W+ RP
Sbjct: 122 ATMLVGNRMDHQTGYWELVRQVLFDGEKEVSHEVLGDDPQFKTQMA----EDPELWRRRP 177
Query: 182 LTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIY 222
L ++ YA + L+ L+H + Y L + D + Y
Sbjct: 178 LPQHVVDYALSGCLHLIPLYHAIQSRY-LTSTEAMTDAIEY 217
>gi|224613352|gb|ACN60255.1| Transcriptional activator protein Pur-beta [Salmo salar]
Length = 213
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 25/130 (19%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKL--------------SSIAFPAQ 428
+KSE L+++ R+Y+LDLK+N R RF+ I Q L G +IA PAQ
Sbjct: 25 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTLNRGPGFGVGSGGVPGGMQSGQTIALPAQ 84
Query: 429 DLGPIIGLISDLQQEHSCPEDE----------DGAPEGNYMRCNNKRFFFNVSKNGKGTF 478
L ++ ++ ++E PEG + ++KRFFF+V N G F
Sbjct: 85 GLIEFRDALAKHIDDYGGDDEELAGGGGAGGYSELPEGTSIMVDSKRFFFDVGSNKYGVF 144
Query: 479 MRISEISTPS 488
MR+SE+ PS
Sbjct: 145 MRVSEVK-PS 153
>gi|412992429|emb|CCO18409.1| predicted protein [Bathycoccus prasinos]
Length = 394
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPL--IMFDGKLHEVLESDRILKVI 98
+ D EG+ L GK++L+ +A+ KIF+ DV + + DG L +++ES+ ILK+
Sbjct: 172 IAYDCEGVRLSRTGKITLLQIAIPK-KIFLIDVMTIGGKEVFTDGGLKDIIESEEILKLA 230
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLND-----LLK 153
+ D+ L ++ LKNV D Q A+ R + +V H L+ L
Sbjct: 231 YDVRMDSDALFHQHDVVLKNVLDLQLLDIAI-----RRAAGGIVEHLPSLSKTVSRRLTN 285
Query: 154 FYKISPNNFKKNIQNLYR--ENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ + KK ++N+Y E+ +W RPL D YAA D L+ L M
Sbjct: 286 AEILVCEDLKKRVKNMYTSVEDGDLWARRPLIDDARRYAALDAWVLMKLDQAM 338
>gi|354471775|ref|XP_003498116.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1
[Cricetulus griseus]
gi|344241168|gb|EGV97271.1| Exonuclease 3'-5' domain-containing protein 1 [Cricetulus griseus]
Length = 571
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAMLHIKKQSVLSVAAEGTNVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLNNVFDTQVA-DVLQFS---METGGFLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIW 177
I L++ K++P +F + Q L +ENP +W
Sbjct: 259 ISTLQESLIRHLKVAPKYLSFLEERQKLIQENPEVW 294
>gi|156844457|ref|XP_001645291.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156115951|gb|EDO17433.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 746
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 122/279 (43%), Gaps = 53/279 (18%)
Query: 16 MNRTNLITDVQEAQSAMATILNE-SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDV 73
N + D EA +M L E +++ +DLE D G V L+ ++ + + F+ D
Sbjct: 208 WNSESTWVDTSEALQSMLDKLKECTEIAVDLEHHDYRSYYGIVCLMQISTRK-EDFLVDT 266
Query: 74 YSCPLIMFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
+ +LH EV ILKV+HGAF D L + + + +++DT A AL
Sbjct: 267 -----LALRDELHILNEVFADPNILKVLHGAFMDIIWLQRDLGLYVVSLFDTYHASRALG 321
Query: 131 LSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYA 190
PR H++ LL+ Y NFK + + + W+ RPL+ M YA
Sbjct: 322 F--PR--------HSLAY--LLEKYA----NFKTSKKYQLAD----WRVRPLSKPMHAYA 361
Query: 191 AADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRK 250
AD LL ++ ++ +N+L+ +N + E LF N+ KRR F ++ R
Sbjct: 362 RADTHFLLNIYDQI-------RNQLIRENKLAEVLFES---RNVAKRR-FEYSRFR---- 406
Query: 251 DLMSSKRPYPYIEEVNSNEYIWRN---DYNVPLANAKLL 286
K P P + E WR YNVP +LL
Sbjct: 407 ----PKVPSPAVFTPIEKEEPWRTLVYQYNVPSTKIELL 441
>gi|241121663|ref|XP_002403291.1| conserved hypothetical protein [Ixodes scapularis]
gi|215493400|gb|EEC03041.1| conserved hypothetical protein [Ixodes scapularis]
Length = 609
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A++ I E+ + + EG +G +G +S++++ + K+FIFDV + +FD L +VLE
Sbjct: 160 ALSAINREASIAVGFEGSPVGRNGCLSVLAV-VAGTKVFIFDVLTLKDTLFDKGLRQVLE 218
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ---LSDPRLLSQDLVPHTIG 147
S I KVIHG + L F ++L NV+DTQ A + L + R + L G
Sbjct: 219 SKTIEKVIHGCRHLSDCLYHKFRVQLDNVFDTQVADLFIHYNRLGNDRGGCR-LPSFVRG 277
Query: 148 LNDLLK-FYKISPNNFK--KNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ F +S + K ++ QN +W RPL+ L DV L L
Sbjct: 278 VQQCLRHFLHLSHDQLKYTRSRQNQPEGELTVWHQRPLSLRQLDALVKDVAFLPELRRVC 337
Query: 205 TKEYA 209
+E+A
Sbjct: 338 QEEFA 342
>gi|363734691|ref|XP_001234592.2| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Gallus
gallus]
Length = 407
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 46 EGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDA 105
EG++L GK+S + +A ++ +F+FD++ F L VLE ILKV+H +
Sbjct: 165 EGVNLCPHGKLSWLQIATKS-HVFLFDIFLLGPQAFRNGLQAVLEDKNILKVMHDCRWIS 223
Query: 106 GGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH-TIGLNDLLKFYKISPNNFK- 163
L +++ L NV+DTQ A LQ S + + PH T L + L + P+ +K
Sbjct: 224 DCLFHQYSVLLDNVFDTQVA-DVLQFS---VATGGFFPHRTCTLQECLMQHLRIPSKWKT 279
Query: 164 --KNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
K Q + ENP W RPL + +L A LL L
Sbjct: 280 LMKCKQQMALENPDTWFLRPLPASLLQVLALKAMCLLLL 318
>gi|71982768|ref|NP_001021323.1| Protein EGAL-1, isoform a [Caenorhabditis elegans]
gi|351049691|emb|CCD63389.1| Protein EGAL-1, isoform a [Caenorhabditis elegans]
Length = 574
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 11 LLRTLMNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGKVSL-VSLAL 63
L ++ + R + + ++ AQ ++ + + + VGLDL+ + +GVDG++ L + +
Sbjct: 282 LDQSALTRIHFVKALKPAQDLISRLWQDINNMEKKVVGLDLKTVTVGVDGEIFLSLGVIA 341
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+I IFD+ S +I+ + +LES++++KVIH A A L + + ++NV+DTQ
Sbjct: 342 TTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVFDTQ 401
Query: 124 CAFTALQ-------LSDPRLLS-----QDLVPHTIGLNDLL-KFYKISPNNFKKNIQNLY 170
A + LQ L++ R +S + P +I L+D+ + + PN
Sbjct: 402 VAHSLLQHEKFNKSLNEMRPISFINLQRVYYPQSIMLSDVTPRKMSMCPN---------- 451
Query: 171 RENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
W RP+T + L + LL AL+ ++
Sbjct: 452 ------WGVRPITEEFQLTIVEEAHCLLSALYQSLS 481
>gi|71982776|ref|NP_001021324.1| Protein EGAL-1, isoform b [Caenorhabditis elegans]
gi|351049692|emb|CCD63390.1| Protein EGAL-1, isoform b [Caenorhabditis elegans]
Length = 569
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 11 LLRTLMNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGKVSL-VSLAL 63
L ++ + R + + ++ AQ ++ + + + VGLDL+ + +GVDG++ L + +
Sbjct: 282 LDQSALTRIHFVKALKPAQDLISRLWQDINNMEKKVVGLDLKTVTVGVDGEIFLSLGVIA 341
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+I IFD+ S +I+ + +LES++++KVIH A A L + + ++NV+DTQ
Sbjct: 342 TTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVFDTQ 401
Query: 124 CAFTALQ-------LSDPRLLS-----QDLVPHTIGLNDLL-KFYKISPNNFKKNIQNLY 170
A + LQ L++ R +S + P +I L+D+ + + PN
Sbjct: 402 VAHSLLQHEKFNKSLNEMRPISFINLQRVYYPQSIMLSDVTPRKMSMCPN---------- 451
Query: 171 RENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
W RP+T + L + LL AL+ ++
Sbjct: 452 ------WGVRPITEEFQLTIVEEAHCLLSALYQSLS 481
>gi|313221140|emb|CBY31966.1| unnamed protein product [Oikopleura dioica]
gi|313234849|emb|CBY24793.1| unnamed protein product [Oikopleura dioica]
Length = 581
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 18 RTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLA-LQNGKIFIFDVYSC 76
R L+ + +S ++ + +D+EG LG +GK++L+ + +G ++ D+ +
Sbjct: 255 RVKLLDTPEMFESVREELMRSKYLLVDMEGDQLGPNGKITLLQINNYTSGNCYLLDILAV 314
Query: 77 ---------PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
P I G L ++ + R++K G D L +++ I + D Q +
Sbjct: 315 GDSSLRERDPQI---GWLRDIFQYPRVIKFFWGGVSDTANLFASYEISVAGFIDLQVVES 371
Query: 128 ALQLSDPRLLSQDLVP---HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
+ +L + P H +GL +++ K + ++ + H+W RPLTS
Sbjct: 372 QYRQRLIKLTNGQQDPTKKHPLGLEAAYEYFTDKSLIRYKQGKAKHKTDYHVWSRRPLTS 431
Query: 185 DMLLYAAADVESLLALFH 202
+L YAA DV +L + H
Sbjct: 432 QLLKYAAFDVAALRPIVH 449
>gi|68074103|ref|XP_678966.1| exonuclease [Plasmodium berghei strain ANKA]
gi|56499594|emb|CAI04586.1| exonuclease, putative [Plasmodium berghei]
Length = 406
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQ-------NGKIFIFDVYSCPLIMFDGKLHEVLESDR 93
+ +D EG +LG GK+ L+ + + K +IFD+ + +I + +++E+ +
Sbjct: 105 IAVDFEGTNLGRYGKICLMQIYTEIEKKDKVFEKYYIFDLLNKSVI---NSVKKIIENKK 161
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
LKVIH D+ L + +I+ +NVYDT A L L + + L+D L
Sbjct: 162 TLKVIHDCREDSSALYNQLDIKFENVYDTLRAHMLL-LEKKKENDIYQISFLNLLHDYLG 220
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
F NN KK + +N IW+ RPL+ ++YA +V+ LL ++
Sbjct: 221 FKDDCLNNIKKEMY----KNERIWEIRPLSKISIIYALKNVKYLLPIY 264
>gi|281210039|gb|EFA84207.1| 3'-5' exonuclease domain-containing protein [Polysphondylium
pallidum PN500]
Length = 315
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 45/159 (28%)
Query: 37 NESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILK 96
+E + +D+EG+++G G++SLV + L +G++F+FDV +FD L ++LES+ ILK
Sbjct: 153 HEHVIAIDVEGLEMGKQGEISLVQVGLMSGRVFLFDVLRLGQQLFDRGLRQILESNNILK 212
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
++H D+ L + Y+ + FT
Sbjct: 213 IVHDCRRDSEILYHRHQRAVDLKYEARQQFT----------------------------- 243
Query: 157 ISPNNFKKNIQNLYRENP-HIWKTRPLTSDMLLYAAADV 194
ENP IW RPL+ M+ Y+A D
Sbjct: 244 ---------------ENPAEIWGKRPLSKLMIDYSALDA 267
>gi|124512300|ref|XP_001349283.1| exonuclease, putative [Plasmodium falciparum 3D7]
gi|23499052|emb|CAD51132.1| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 406
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 31/178 (17%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQN-----------GKIFIFDVYSCPLIMFDGKLHEVL 89
+ +D EG +LG GKV L+ + ++ K +IFD+ +I +++
Sbjct: 101 IAIDFEGTNLGRYGKVCLMQVYVEKKNMNEQSDNILQKYYIFDLLKTSVI---KSAQKII 157
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL----QLSDPRLLS-QDLVPH 144
E+ + LK+IH D+ L + ++L+NVYDT A L + +D +S L+
Sbjct: 158 ENKKTLKLIHDCREDSSALYNQLGMKLENVYDTSRAHLLLMEKQKKNDIYQVSFAQLIND 217
Query: 145 TIGLNDL-LKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
+G+ND L F K + +Y+ N IW+TRPL++ ++YA +V+ L L+
Sbjct: 218 YLGINDASLSFIK----------KEMYK-NEKIWETRPLSNISIIYALKNVKYLYKLY 264
>gi|358387264|gb|EHK24859.1| hypothetical protein TRIVIDRAFT_137866, partial [Trichoderma virens
Gv29-8]
Length = 245
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 34/194 (17%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNGK----IFIFDVYSCPLIMFDG------KLHEVLESD 92
+DLEG +LG +G +SL+++ + G+ I++ D+Y+ FD L +LE+
Sbjct: 32 VDLEGENLGRNGSISLMTVLVYPGEGLEHIYVIDIYTLGRAAFDAVGERGKSLKNILEAP 91
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
ILKV D+ L + + L+ V D Q +A S P ++ V GL +
Sbjct: 92 EILKVFFDVRNDSDALFFLYGVNLRGVRDLQLMDSA---SRPNAENRKFVS---GLAKCM 145
Query: 153 KFYKISPNNFKKNIQNLYRE------NPH------IWKTRPLTSDMLLYAAADVESLLAL 200
+F ++ +K NL ++ NP ++ TRPL +++L Y A DV L A+
Sbjct: 146 EFVPLT--GAQKAEWNLCKDQGDRLWNPEKGGSYSVFNTRPLPAEILRYCAGDVAYLPAM 203
Query: 201 FHRMTKEYALKQNR 214
+ K+YA + NR
Sbjct: 204 Y----KKYASQTNR 213
>gi|297288367|ref|XP_002803334.1| PREDICTED: transcriptional activator protein Pur-beta-like, partial
[Macaca mulatta]
Length = 204
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 31/136 (22%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKL-------------SSIAFPAQD 429
+KSE L+++ R+Y+LDLK+N R RF+ I Q + GG +IA PAQ
Sbjct: 11 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQG 70
Query: 430 LGPIIGLISDLQQEHSCPEDE-----------------DGAPEGNYMRCNNKRFFFNVSK 472
L ++ L ++ +DE PEG + ++KRFFF+V
Sbjct: 71 LIEFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGC 130
Query: 473 NGKGTFMRISEISTPS 488
N G F+R+SE+ PS
Sbjct: 131 NKYGVFLRVSEVK-PS 145
>gi|380806701|gb|AFE75226.1| purine-rich element-binding protein gamma isoform B, partial
[Macaca mulatta]
Length = 207
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 48/160 (30%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTR------NQIHISMSVVGHLRDHLNALLT--AHQ 370
K+FY D+KQS +F+KI+EV + + R +++ +S+SV L+D L + AH
Sbjct: 13 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHL 72
Query: 371 NTPRHRYRDTHT-----------------------------IKSEVLIKDTRRYFLDLKD 401
HR H+ +K++ + +D R+Y+LDLK+
Sbjct: 73 GLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKYYLDLKE 132
Query: 402 NGRARFVTISQLLPVG-----------GKLSSIAFPAQDL 430
N R RF+ I Q + G G+ +I PAQ +
Sbjct: 133 NQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGM 172
>gi|348520666|ref|XP_003447848.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Oreochromis niloticus]
Length = 467
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G+ EG+++ +G++ + +A +N K+++FDV F L +LES ILKVIH
Sbjct: 41 IGVGAEGVEVFKNGRLCWLQIATKN-KVYLFDVLLLGARAFKNGLAVILESKHILKVIHD 99
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG-LNDLLKFYKISP 159
AG L++ F ++L NV+DTQ A S+ + +P + L+++L + +P
Sbjct: 100 CRAIAGCLIAQFGVKLANVFDTQVADVMCFYSE----TGGFLPDRVSTLHEVLSLHLRAP 155
Query: 160 NNFKKNIQ---NLYRENPHIWKTRPLTSDMLLYAAADVESL----LALFHRMTKEYALKQ 212
+ ++Q +E +W RP +L A V L L L + ++Y
Sbjct: 156 PSQLSSLQIKSQFTKEESEMWHMRPCPLPLLKVMALSVIHLQPLRLVLMDTLMRDYMALV 215
Query: 213 NRLLLDNLIYETLFNHVVPLNIRK-RRQFRQNQ-LRRWRKDLMSSKRPYPYIEE 264
+ L + HV ++ + R RQ + +RR R + S YP E+
Sbjct: 216 DSYLSSSHYQPDELAHVGMESVLELPRDLRQLEVMRRERHEWASGH--YPLTEQ 267
>gi|268537368|ref|XP_002633820.1| Hypothetical protein CBG19850 [Caenorhabditis briggsae]
Length = 574
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 11 LLRTLMNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGKVSL-VSLAL 63
L ++ + R + + ++ AQ +A + + + VGLDL+ + +GVDG++ L + +
Sbjct: 282 LDQSALTRIHFVKALKPAQDLIARLWQDINNMEKKVVGLDLKTVTVGVDGEIFLSLGVIA 341
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+I IFD+ S +I+ + +LES++++KVIH A A L + + ++NV+DTQ
Sbjct: 342 TTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVFDTQ 401
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A + LQ ++ P I +L + Y ++P+ W RP+T
Sbjct: 402 VAHSLLQHDKFGKPVHEMRP--ITFINLQRVYYPQSLMLSDVTPRKMSQSPN-WGVRPIT 458
Query: 184 SDMLLYAAADVESLL-ALFHRMT 205
+ L + LL AL+ ++
Sbjct: 459 EEFQLTIVEEAHCLLSALYQALS 481
>gi|156083893|ref|XP_001609430.1| exosome component 10 [Babesia bovis T2Bo]
gi|154796681|gb|EDO05862.1| exosome component 10, putative [Babesia bovis]
Length = 879
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 18 RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSC 76
R L+ ++E +S + + S V +D+E G V LV + + ++ D
Sbjct: 315 RCKLVQTLEELESMITLLKKCSIVAIDVEHHSTQSYRGFVCLVQITGADDD-WVID---- 369
Query: 77 PLIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
P +FD +L++V RILKV+HGA D L +F + + N++DT A L LS
Sbjct: 370 PFSIFDEMWRLNDVTTDPRILKVMHGAESDILWLQRDFGVYVVNLFDTLKAADVLCLSCG 429
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
LS LV H +G++ L K Y+++ W+ RP+ DML YA AD
Sbjct: 430 HSLSS-LVRHFLGIH-LDKSYQLAD-----------------WRIRPIPRDMLTYATADT 470
Query: 195 ESLLALFHRMTKEYALKQN 213
LL L+ + K AL+Q+
Sbjct: 471 HYLLDLYSAL-KNTALEQD 488
>gi|70950310|ref|XP_744489.1| exonuclease [Plasmodium chabaudi chabaudi]
gi|56524464|emb|CAH74590.1| exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 406
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQ-------NGKIFIFDVYSCPLIMFDGKLHEVLESDR 93
+ +D EG +LG GKV L+ + + K +IFD+ + +I + +++E+ +
Sbjct: 105 IAVDFEGTNLGRYGKVCLMQIYTEIEKKDKVFEKYYIFDLLNKSVI---NSVKKIIENKK 161
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
LKVIH D+ L + +I+ +NVYDT A L + D+ + + +LL
Sbjct: 162 TLKVIHDCREDSSALYNQLDIKFENVYDT---LRAHMLLLEKKKENDI--YQVSFLNLLH 216
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
Y ++ NI+ +N IW+ RPL+ ++YA +V+ LL ++
Sbjct: 217 DYLGVKDDCLNNIKKEMYKNDKIWEIRPLSKISIIYALKNVKYLLPIY 264
>gi|308270300|emb|CBX26912.1| hypothetical protein N47_A09410 [uncultured Desulfobacterium sp.]
Length = 382
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 14 TLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFD 72
+L +I + + A+ I E K+G DLE + KV L+ +A +N IF+ D
Sbjct: 4 SLTKPVTIIETLSGLKDALVNIKEEKKIGFDLEADSMHHFPEKVCLLQVATKNC-IFVID 62
Query: 73 VYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS 132
+ L + + I K+ HGA D L +FNI + N++D++ A L +
Sbjct: 63 TIKLKELSL---LKPIFADNEITKIFHGADYDVRSLFRDFNIEINNLFDSELASRFLGVK 119
Query: 133 DPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAA 192
+ L + ++ H + KF K R+ W RPL DML YAA
Sbjct: 120 ETGL--EAVIRHRFNVYLEKKFTK--------------RD----WSKRPLIDDMLHYAAD 159
Query: 193 DVESLLALFHRMTKE 207
DV L+ L+ + KE
Sbjct: 160 DVRYLVPLYEILEKE 174
>gi|346465695|gb|AEO32692.1| hypothetical protein [Amblyomma maculatum]
Length = 636
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A+A + E + + EG +G G +S++ +A + K+ IFDV++ +F L E+LE
Sbjct: 167 AIAALKQEQSISIGYEGTKVGRHGFLSVL-VAATSSKVHIFDVFALKEELFSHGLKEILE 225
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTI-GLN 149
S I KVIHG + L + + L NV+DT A L + + Q P + G+
Sbjct: 226 SKDIQKVIHGCRHLSDSLYHQYQVSLDNVFDTMVADIILYHNASVDVGQYKFPDFVRGVQ 285
Query: 150 DLLK---FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
+ LK + + + ++ + E WK RPL+ + A DV
Sbjct: 286 NCLKNILEFNYAQMKYTRSRKGSQEEEVSTWKLRPLSLQQIDAVAKDV 333
>gi|118394996|ref|XP_001029855.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89284128|gb|EAR82192.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1146
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 43/226 (19%)
Query: 18 RTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQ----NGKIFIFDV 73
R ++ D + A TI VG+DLEG L +G V LV +++Q +IFIFD+
Sbjct: 425 RIVVVDDEESLNYANYTIPKFKHVGVDLEGA-LRKEGYVQLVQISIQLKPDFSQIFIFDI 483
Query: 74 YSCPLIMFDGKLHE--------VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
YS I D L + +++ I+K+ H D+ L KNV+DT A
Sbjct: 484 YSIQNIKEDKILEKNMINCIQNIMQDVNIIKIFHDCRRDSLALHLFMKACPKNVFDT-AA 542
Query: 126 FTALQLSDPRLLSQDLVPHTI------------------------GLNDLLKFYKISP-- 159
A +L + + D + GLND+L+ Y S
Sbjct: 543 IHAFKLHVEKYI--DFTKNKFKGLNTKEDKNILQLLKSLEELKQPGLNDILQIYNTSHGI 600
Query: 160 NNFKKNIQNLYRENPHIW-KTRPLTSDMLLYAAADVESLLALFHRM 204
N K ++ ++E P ++ RP+ + L Y+A DVE L+ +H M
Sbjct: 601 NLLKDSMHQKFQEMPSLYFLQRPIDPEFLEYSARDVEDLIEAYHFM 646
>gi|405975309|gb|EKC39883.1| hypothetical protein CGI_10016615 [Crassostrea gigas]
Length = 429
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 20 NLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+I + + + + E + +D EG+ LGVDG ++LV + +G++++FD+ +
Sbjct: 7 EVIENTARCRQVVGILAGEQVLAVDCEGVSLGVDGPLTLVQVGNYSGEVYLFDILKNKDL 66
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
+ G+L +LES I+K CA +Q R L+
Sbjct: 67 LSRGRLGTLLESGNIVK---------------------------CANLLIQEHKGRRLAP 99
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLY-RENPHIWKTRPLTSDMLLYAAADVESLL 198
L I K + K I+ + + IW RP+T +M+LYAA DV +++
Sbjct: 100 PLKLAVICEEYGGKGFS---TELKDGIKTEWLKMTGDIWAKRPMTEEMILYAAGDVTAIV 156
Query: 199 ALFHRMTKEYALKQNRLL--LDNLIYETLFNHVVPLNIRKRR 238
+ K Y L+ N LL + + E +F ++ +KRR
Sbjct: 157 PEVYENQKRY-LEDNNLLAKFEERVEEEIFYYIDHSFKQKRR 197
>gi|326532740|dbj|BAJ89215.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 66/238 (27%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + ++ V D +
Sbjct: 36 VELV-SKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYY 93
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ D + S+ L DT+ ++ D+ +N R R++ +S+ ++P
Sbjct: 94 IRT----------DERDVFSKELRLDTKVFYFDIGENKRGRYLKVSEASVNRNRSTIIVP 143
Query: 416 VG--GKLSSIAF--------------------PAQD-LGP---IIGLISDL--------- 440
G G+ AF P+Q L P + GL D+
Sbjct: 144 AGSSGEEGWEAFRNVLLEINDEASRLYVLPNHPSQQHLEPPERLPGLSDDVGAGFIAGHG 203
Query: 441 QQEHSCPE-DEDGAPEGNY--------MRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
Q S PE D DG P + +R + KRFFF++ N +G ++RISE++ +
Sbjct: 204 SQSASVPEVDVDGPPIEEFSGMGLSKVIRADQKRFFFDLGSNNRGHYLRISEVAGADR 261
>gi|432937200|ref|XP_004082385.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Oryzias latipes]
Length = 494
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A++ I +S +G++ EG+D +G++ + +A K+++FD+ F L +LE
Sbjct: 128 AVSHIKKQSVIGVNAEGVDKSRNGRLCWLQIATTQ-KVYLFDILLLGTQAFRNGLSFILE 186
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTI-GLN 149
S ILKVIH AG L++ F ++L NV+DTQ A S+ + +P I L
Sbjct: 187 SKHILKVIHDCRVIAGSLMAQFGVKLMNVFDTQVADVMCFHSE----TGGFLPDRISSLQ 242
Query: 150 DLLKFYKISPNNFKKNIQ---NLYRENPHIWKTRPLTSDML 187
+++ + P++ +Q L +++ +W RP + +L
Sbjct: 243 EVVSLHLKVPSSRLSALQMKSQLTKKDMEVWYERPCPAPLL 283
>gi|389582415|dbj|GAB65153.1| 3'-5' exonuclease domain containing protein, partial [Plasmodium
cynomolgi strain B]
Length = 300
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLV---------------SLALQN 65
++ + +E A I + +D EG +LG GKV ++ S L
Sbjct: 85 IVENEKEGNDAAEEINQNDIIAVDFEGTNLGKYGKVCIMQVYTEERTQGGTRQKSECLSR 144
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
K +IFD+ +I + +++E+ + LK++H D+ L + I+ +NVYDT A
Sbjct: 145 EKYYIFDLLKMSVIK---SVKKIIENKKTLKLVHDCREDSSALYNQLGIKFENVYDTSRA 201
Query: 126 FTALQLSDPRLLSQDL--VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
L + S D+ V LND L ++ KK +Y+ N IW+ RPL+
Sbjct: 202 HMLLMEKNK---SNDIYQVSFLQLLNDYLGIKDECLSSIKK---EMYK-NEKIWEVRPLS 254
Query: 184 SDMLLYAAADVESLLALF 201
++YA +V+ L L+
Sbjct: 255 KMSIIYALKNVKYLFPLY 272
>gi|405973647|gb|EKC38348.1| Exonuclease 3'-5' domain-containing protein 1 [Crassostrea gigas]
Length = 1024
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
++ +L+ S VGL ++G+ +G G+V V A +F+FD+ P F+ + +LE
Sbjct: 161 SIDAVLHCSVVGLAMQGVCVGRSGEVCWVQFATDR-DVFLFDILELPPECFEEGIKAILE 219
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA-------FTALQLSD-PRLLSQDLV 142
+ +LKV H + L NI+L NV+DTQ A F + D PR +
Sbjct: 220 NPDVLKVTHDCRLISDYLFHRHNIKLINVFDTQVADVFVDRLFKGGKGGDWPRYVK---- 275
Query: 143 PHTIGLNDL-LKFYKISPNNF--KKNIQNLYRENPHIWKTRPLTSDML 187
GL D L + P K + L + + IW TRP++ +L
Sbjct: 276 ----GLADCALNHLNLEPEQVLNLKTRERLKKHDEEIWATRPISRQLL 319
>gi|308808822|ref|XP_003081721.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
gi|116060187|emb|CAL56246.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
Length = 408
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFD----GKLHEVLES-DRIL 95
V +D EG+ + G ++++ A ++ KI++ D+ + + F G + ++LES + L
Sbjct: 192 VAVDCEGVMMSRTGPITVLQCATRD-KIYLIDIQALGVKAFGARGSGGMRDLLESREAPL 250
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ--DLVPHTIGLND--L 151
K++ D+ L +++RL+NV D Q L L+ R L D V D L
Sbjct: 251 KLMFDCRMDSDALFHQYDVRLENVMDVQ----ILDLATRRALGLMIDRVAGIAKCTDKHL 306
Query: 152 LKFYKISPNNFKKNIQNLYR-ENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ + K ++ LY E +W RPLT D YAA DV L+ L+ +M
Sbjct: 307 TEAETAVAADLKVRVRKLYAVEESQLWAERPLTEDARRYAALDVWLLIKLYDKM 360
>gi|403364361|gb|EJY81942.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 566
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 28/199 (14%)
Query: 17 NRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSC 76
N+ L+ + + Q A+ + + +G+D+EG D V L+ + ++ + IFD+YS
Sbjct: 328 NKILLVDNQLKLQQALNILKEQDSIGIDIEGQD------VVLLQIGCKDDVVLIFDIYS- 380
Query: 77 PLIMFDGKL----HEVLES----DRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA--- 125
I + KL H VL S + I KV+ GD L ++NV+D Q
Sbjct: 381 --IYQNKKLYSTTHFVLNSLFMDESIRKVVFDGKGDVEALHFILETGVRNVFDIQVGHLI 438
Query: 126 FTAL-QLSDPRLLSQDLVPHTIGLNDLLKFYKI------SPNNFKKNIQNLYRENPHIWK 178
+T L QL + + Q L LN +L+ +K S FK +N R++ ++
Sbjct: 439 YTQLKQLKETKKHFQALGVKAASLNAVLEQFKTKRGVNTSKAQFKAVFKNP-RKSQKLFY 497
Query: 179 TRPLTSDMLLYAAADVESL 197
RPL D L YAA DV+ L
Sbjct: 498 DRPLPQDFLDYAAQDVQDL 516
>gi|358253598|dbj|GAA53478.1| transcriptional activator protein Pur-alpha [Clonorchis sinensis]
Length = 485
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTA--------- 368
N KF + +++ +TK KI V D + +I ++++ ++D L L+
Sbjct: 142 NNKFQY-LQEPYTTK--KIWPVGADGRKARILLTLNAALEIKDKLKDLIDVLDGVLKKEE 198
Query: 369 -----HQNTPRHRYRDTHTIKSEVLIKD------TRRYFLDLKDNGRARFVTISQLLPVG 417
++ P + + ++ LIK RRYFLDLK N R F+ ++ L +
Sbjct: 199 ASTERSEDKPEEESKFSEAANNDGLIKSHIVNYPYRRYFLDLKRNKRGHFLRLTMLSTL- 257
Query: 418 GKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGT 477
+A P+Q + + I+DL + + + E +R +N+ +F+ S N GT
Sbjct: 258 -NRVQLAVPSQGMLDLYNAINDLLDKWWDGSEAETQKESKSLRVDNRTLYFDSSCNRYGT 316
Query: 478 FMRISEISTPSKVLTNI 494
++RISE+ T S+ I
Sbjct: 317 YLRISEVRTASRTAITI 333
>gi|294883488|ref|XP_002770959.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|294886213|ref|XP_002771613.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239874097|gb|EER02775.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239875319|gb|EER03429.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 221
Score = 60.1 bits (144), Expect = 6e-06, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNG--KIFIFDVYSCPLIMFDGKLH------EVLESD 92
+ +D EG++L DG +SL L L + +++ D+ F H ++E
Sbjct: 1 MAVDFEGLNLSRDGAMSLAQLCLSSDPRSVYVVDITRLGFHAFHATTHTGTSLKSIMEDS 60
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
RI KV + D L FN+ +NV+D Q A AL+ + R L+ V + IGL L
Sbjct: 61 RIEKVFYDPRNDVDALYYQFNVAPQNVFDLQLAEVALRRA--RGLT---VRYVIGLFKCL 115
Query: 153 -----KFYKISPNNFKKNIQN----LYRENPH-----IWKTRPLTSDMLLYAAADVESLL 198
F + + +F + I + LY E H ++ RPL + +++YA+ DV LL
Sbjct: 116 IAQPELFTQPAMKDFARRINDAGKALY-EPTHGGSFKVFTQRPLHTSIIVYASHDVRYLL 174
Query: 199 ALFHRMTK 206
L TK
Sbjct: 175 PLKDLFTK 182
>gi|218779802|ref|YP_002431120.1| 3'-5' exonuclease [Desulfatibacillum alkenivorans AK-01]
gi|218761186|gb|ACL03652.1| 3'-5' exonuclease [Desulfatibacillum alkenivorans AK-01]
Length = 388
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 26/153 (16%)
Query: 65 NGKIFIFDVYSCPLIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
NG +I D PL D K L +LE+D I K+ HGA D L +F I L N++DTQ
Sbjct: 61 NGLNYIVD----PLCDCDVKALAPILENDEIQKIFHGADYDVRCLFRDFGIELHNLFDTQ 116
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A R L + P T GL LL+ + F ++ Y++ W RPL
Sbjct: 117 VAA--------RFLGE---PQT-GLAPLLE------SRFGVQLEKKYQKK--NWSLRPLP 156
Query: 184 SDMLLYAAADVESLLALFHRMTKEYALKQNRLL 216
+M+ YAA D LL L + KE ++++RL
Sbjct: 157 PEMMAYAANDTVHLLELAEILKKEL-VEKDRLF 188
>gi|402877950|ref|XP_003902671.1| PREDICTED: Werner syndrome ATP-dependent helicase [Papio anubis]
Length = 1373
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 VGFDMEWPPLYNKGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ LS LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLS-GLVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|221053416|ref|XP_002258082.1| exonuclease [Plasmodium knowlesi strain H]
gi|193807915|emb|CAQ38619.1| exonuclease, putative [Plasmodium knowlesi strain H]
Length = 414
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 29/244 (11%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLV---------------SLALQN 65
++ + +E A I + +D EG +LG GKV ++ S L
Sbjct: 85 IVENEKEGNDAAEEINRNDIIAVDFEGTNLGKYGKVCIMQVYTEERTPGGVHPKSECLSR 144
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
K +IFD+ +I + +++E+ + LK++H D+ L + I+ +NVYDT A
Sbjct: 145 EKYYIFDLLKMSVIK---SVKKIIENKKTLKLVHDCREDSSALYNQLGIKFENVYDTSRA 201
Query: 126 FTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSD 185
L + R V LND L ++ KK + +N IW+ RPL+
Sbjct: 202 HMLL-MEKNRNSDIYQVSFLQLLNDYLGIKDDCLSSIKKEMY----KNEKIWEVRPLSKM 256
Query: 186 MLLYAAADVESLLALF----HRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFR 241
++YA +V+ L L+ + ++K+ L++++ ++ + + +P+++ KR
Sbjct: 257 SIIYALKNVKYLFPLYRIFDNMLSKKIVLEKSKDFVNYCFMNSRYK--LPVDLAKRGNVV 314
Query: 242 QNQL 245
Q L
Sbjct: 315 QAML 318
>gi|327259620|ref|XP_003214634.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like
[Anolis carolinensis]
Length = 437
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
AM I ++ G+ EG++L GK+S + +A ++ ++F+FD++ +F L +LE
Sbjct: 89 AMMHIKKQTVCGIAAEGINLCRYGKLSWLQVATRS-QVFLFDIFLLGPRVFKNGLQIILE 147
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG-LN 149
ILKVIH + L + I L NV+DTQ A +Q S + + +P I L
Sbjct: 148 DQHILKVIHDCRWLSDCLSHQYGIELTNVFDTQVA-DVMQFS---VETGGFLPLRISNLQ 203
Query: 150 D-LLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDML 187
+ L+++ +S + F Q NP +W RPL+ +L
Sbjct: 204 ECLIEYLGMSRKDVSFMDLRQREIERNPDVWFMRPLSPALL 244
>gi|156097777|ref|XP_001614921.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax
Sal-1]
gi|148803795|gb|EDL45194.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax]
Length = 414
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 33/246 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLV---------------SLALQN 65
++ + +E A I + +D EG +LG GKV ++ S +
Sbjct: 85 IVENEKEGNDAAEEINQNDIIAVDFEGTNLGKYGKVCIMQVYTEERTREGTPPQSECISR 144
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
K +IFD+ +I + +++E+ + LK++H D+ L + I+ +NVYDT A
Sbjct: 145 EKYYIFDLLKMSVIK---SVKKIIENKKTLKLVHDCREDSSALYNQLGIKFENVYDTSRA 201
Query: 126 FTALQLSDPRLLSQDL--VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
L + S D+ V LND L ++ KK +Y+ N IW+ RPL+
Sbjct: 202 HMLLMEKNK---SNDIYQVSFLQLLNDYLGIKDECLSSIKK---EMYK-NEKIWQVRPLS 254
Query: 184 SDMLLYAAADVESLLALF----HRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQ 239
++YA +V+ L L+ + + K+ L++++ ++ + + + +P+++ KR
Sbjct: 255 KMSIIYALKNVKYLFPLYRIFDNMLPKKIVLEKSKDFVNYCLINSRYK--LPVDLAKRGN 312
Query: 240 FRQNQL 245
Q L
Sbjct: 313 IVQAML 318
>gi|313220402|emb|CBY31256.1| unnamed protein product [Oikopleura dioica]
Length = 489
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 43 LDLEGMDLGVDGKVSLVSL-ALQNGKIFIFDVYSC---PLIMFDGKLHEVLESDRILKVI 98
+D EG LG +GK++++ + ++ F+ D+ L+ DG + ++LE + +K
Sbjct: 209 IDQEGDQLGPNGKITVIQINTYESPNCFLLDIKVAGDQELVKKDGWIRQMLEDPKKIKFF 268
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCA-----FTALQLSDPRLLSQDLVPHTIGLNDLLK 153
G D L +++ I++ + D Q L+D + ++ H +GL K
Sbjct: 269 WGGSSDTANLYASYGIKVASFVDLQLVEYHYRHKLAHLTD-GFVEPEVKTHPLGLESAYK 327
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
++ + K + ++ + H+W RPL +L YA+ DV ++ L H K
Sbjct: 328 YFTDADLLRYKADKGKHKTDHHVWARRPLPDSLLKYASFDVAAMRPLSHLFFK 380
>gi|109086093|ref|XP_001085031.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Macaca
mulatta]
Length = 1432
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 VGFDMEWPPLYNKGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ LS LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLS-GLVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|355697852|gb|EHH28400.1| Werner syndrome ATP-dependent helicase [Macaca mulatta]
Length = 1431
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 VGFDMEWPPLYNKGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ LS LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLS-GLVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|308482748|ref|XP_003103577.1| hypothetical protein CRE_28761 [Caenorhabditis remanei]
gi|308259998|gb|EFP03951.1| hypothetical protein CRE_28761 [Caenorhabditis remanei]
Length = 591
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 56/234 (23%)
Query: 11 LLRTLMNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGKVSLVSLA-- 62
L ++ + R + + ++ AQ +A + + + VGLDL+ + +GVDG++ +SL
Sbjct: 282 LDQSSLTRIHFVKALKPAQDLIARLWQDINNMEKKVVGLDLKTVTVGVDGEI-FLSLGEL 340
Query: 63 -----------LQNG------KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDA 105
L +G +I IFD+ S +I+ + +LES++++KVIH A A
Sbjct: 341 IDFRKFPKISHLFSGVIATTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVA 400
Query: 106 GGLLSNFNIRLKNVYDTQCAFTALQ-------LSDPRLLS-----QDLVPHTIGLNDLL- 152
L + + ++NV+DTQ A + LQ L + R +S + P +I L+D+
Sbjct: 401 SLLAHKYAVHMRNVFDTQVAHSLLQHDKFGKSLHEMRPISFINLQRVYYPQSIMLSDVTP 460
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
+ SPN W RP+T + L + LL AL+ ++
Sbjct: 461 RKMSQSPN----------------WGVRPITEEFQLTIVEEAHCLLSALYQALS 498
>gi|340718541|ref|XP_003397724.1| PREDICTED: hypothetical protein LOC100647977 [Bombus terrestris]
Length = 474
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 15 LMNRTNLITDVQEAQSAMATILNESK--------VGLDLEGMDLGVDGKVSLVSLALQNG 66
++ +T +I + +E+ + I+N K V D EG++LGV G+++LV + +G
Sbjct: 380 ILQQTKIIVNPRESLQIIEDIINPRKPPPNGKIVVSFDCEGINLGVKGQLTLVQIGTMSG 439
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
+ ++FD+++CP ++ G L ++LE ++KV
Sbjct: 440 QAYVFDLFACPNLVQAGGLQKLLEHKDVIKV 470
>gi|308455848|ref|XP_003090418.1| hypothetical protein CRE_16505 [Caenorhabditis remanei]
gi|308264027|gb|EFP07980.1| hypothetical protein CRE_16505 [Caenorhabditis remanei]
Length = 591
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 56/234 (23%)
Query: 11 LLRTLMNRTNLITDVQEAQSAMATI------LNESKVGLDLEGMDLGVDGKVSLVSLA-- 62
L ++ + R + + ++ AQ +A + + + VGLDL+ + +GVDG++ +SL
Sbjct: 282 LDQSSLTRIHFVKALKPAQDLIARLWQDINNMEKKVVGLDLKTVTVGVDGEI-FLSLGKF 340
Query: 63 -----------LQNG------KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDA 105
L +G +I IFD+ S +I+ + +LES++++KVIH A A
Sbjct: 341 FDFRNFPKISYLFSGVIATTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVA 400
Query: 106 GGLLSNFNIRLKNVYDTQCAFTALQ-------LSDPRLLS-----QDLVPHTIGLNDLL- 152
L + + ++NV+DTQ A + LQ L + R +S + P +I L+D+
Sbjct: 401 SLLAHKYAVHMRNVFDTQVAHSLLQHDKFGKSLHEMRPISFINLQRVYYPQSIMLSDVTP 460
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
+ SPN W RP+T + L + LL AL+ ++
Sbjct: 461 RKMSQSPN----------------WGVRPITEEFQLTIVEEAHCLLSALYQALS 498
>gi|313232841|emb|CBY09524.1| unnamed protein product [Oikopleura dioica]
Length = 417
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 43 LDLEGMDLGVDGKVSLVSL-ALQNGKIFIFDVYSC---PLIMFDGKLHEVLESDRILKVI 98
+D EG LG +GK++++ + ++ F+ D+ L+ DG + ++LE + +K
Sbjct: 137 IDQEGDQLGPNGKITVIQINTYESPNCFLLDIKVAGDQELVKKDGWIRQMLEDPKKIKFF 196
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCA-----FTALQLSDPRLLSQDLVPHTIGLNDLLK 153
G D L +++ I++ + D Q L+D + ++ H +GL K
Sbjct: 197 WGGSSDTANLYASYGIKVASFVDLQLVEYHYRHKLAHLTD-GFVEPEVKTHPLGLESAYK 255
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
++ + K + ++ + H+W RPL +L YA+ DV ++ L H K
Sbjct: 256 YFTDADLLRYKADKGKHKTDHHVWARRPLPDSLLKYASFDVAAMRPLSHLFFK 308
>gi|390333950|ref|XP_783820.3| PREDICTED: uncharacterized protein LOC578566 [Strongylocentrotus
purpuratus]
Length = 852
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 8/180 (4%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A+A + +S +GL L+G LG GK+SLV L L + ++++FDV + P +F K ++L+
Sbjct: 202 AIADMEQQSAIGLVLKGSRLGRKGKLSLV-LVLCDEQVYMFDVLAVP-SLFTRKFIDILQ 259
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLND 150
+ I KVIH + L ++ I L +V+DTQ ++ R D + G
Sbjct: 260 ATNITKVIHDCRFVSDLLYHHYGIELNSVFDTQVGDILIKR---RQYMGDFPRNVSGTTQ 316
Query: 151 -LLKFYKISPNNFKKNIQNLYR--ENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+L++ +IS ++ +++N R E+ W RPL + A D LL L +T++
Sbjct: 317 CILEYLEISIHDIALHLENTQRIEEDESSWFQRPLPKVNIRCALLDTVYLLRLREAITEQ 376
>gi|452989124|gb|EME88879.1| hypothetical protein MYCFIDRAFT_149452 [Pseudocercospora fijiensis
CIRAD86]
Length = 280
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 22 ITDVQEAQSAMATILNESKVG--------LDLEGMDLGVDGKVSLVSLALQNG-KIFIFD 72
+ D E S + +NES D EG +LG G V+L+++ + + + F+ D
Sbjct: 25 LVDTTEKVSELVRFINESAASHTDEPSFYFDCEGENLGRHGTVTLLAIYVPDLLRAFVVD 84
Query: 73 VYSCP--LIMFDGK---LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
+ + +G+ L + ES +ILK + GD L +++N+ L + D Q
Sbjct: 85 LQELDGNALTTEGQGESLKTIFESPKILKGVFDCRGDGEALFAHYNLNLDGIVDVQLMEA 144
Query: 128 ALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI-WKTRPLTSDM 186
A + + RL D+ L DL K+ + K++++ L R + + RPL +
Sbjct: 145 ATRKNSKRLFGLDVCIKN-RLKDLDPTAKVKFSECKESVKELMRSGDGLCFAERPLPKLL 203
Query: 187 LLYAAADVESLLALF 201
L YAA+DV L L+
Sbjct: 204 LEYAASDVIVLPMLY 218
>gi|30685174|ref|NP_850182.1| transcription factor Pur-alpha 1 [Arabidopsis thaliana]
gi|16930405|gb|AAL31888.1|AF419556_1 At2g32080/F22D22.17 [Arabidopsis thaliana]
gi|330253538|gb|AEC08632.1| transcription factor Pur-alpha 1 [Arabidopsis thaliana]
Length = 295
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 63/231 (27%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + S + D N
Sbjct: 29 VELV-SKTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPSSGISWFLDLFNYY 86
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ + + H + S+ L D++ ++ D+ +N R RF+ +S+ ++P
Sbjct: 87 VNSEE----------HELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVP 136
Query: 416 VGGKLSS--IAF----------------PAQ-----------DLG----PIIGLISDLQQ 442
G AF P Q D+G P G
Sbjct: 137 AGSSPDEGWAAFRNILAEIHEASGLFVMPNQKPSDGQEHLVDDVGAGFIPGHGSQQPSSS 196
Query: 443 EH------SCPEDEDGAPEG--NYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
EH P E+ G +R + KRFFF++ N +G F+RISE++
Sbjct: 197 EHNVDRTIDSPGQEETGMTGVSKVIRADQKRFFFDLGNNNRGHFLRISEVA 247
>gi|405975310|gb|EKC39884.1| hypothetical protein CGI_10016616 [Crassostrea gigas]
Length = 106
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIM 80
+I DV + + + E + +D EG+ LGVDG ++L+ + + ++++FD+ ++
Sbjct: 8 VIEDVGRCKQVVGVLERERVLAVDCEGVSLGVDGPLTLIQVGNYSREVYLFDILRNKDLL 67
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNV 119
G+L +LES I+KV D L F + LKNV
Sbjct: 68 SRGRLGTLLESPNIIKVKQSCSNDIAALYHQFKVTLKNV 106
>gi|18402871|ref|NP_565736.1| transcription factor Pur-alpha 1 [Arabidopsis thaliana]
gi|75206587|sp|Q9SKZ1.2|PUR_ARATH RecName: Full=Transcription factor Pur-alpha 1; AltName:
Full=Purine-rich single-stranded DNA-binding protein
alpha 1
gi|5081612|gb|AAD39465.1|AF136152_1 PUR alpha-1 [Arabidopsis thaliana]
gi|17386138|gb|AAL38615.1|AF446882_1 At2g32080/F22D22.17 [Arabidopsis thaliana]
gi|15450693|gb|AAK96618.1| At2g32080/F22D22.17 [Arabidopsis thaliana]
gi|20197621|gb|AAD15396.2| putative purine-rich single-stranded DNA-binding protein
[Arabidopsis thaliana]
gi|330253537|gb|AEC08631.1| transcription factor Pur-alpha 1 [Arabidopsis thaliana]
Length = 296
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 64/232 (27%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + S + D N
Sbjct: 29 VELV-SKTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPSSGISWFLDLFNYY 86
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ + + H + S+ L D++ ++ D+ +N R RF+ +S+ ++P
Sbjct: 87 VNSEE----------HELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVP 136
Query: 416 VGGKLSS--IAF----------------PAQ------------DLG----PIIGLISDLQ 441
G AF P Q D+G P G
Sbjct: 137 AGSSPDEGWAAFRNILAEIHEASGLFVMPNQVKPSDGQEHLVDDVGAGFIPGHGSQQPSS 196
Query: 442 QEH------SCPEDEDGAPEG--NYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
EH P E+ G +R + KRFFF++ N +G F+RISE++
Sbjct: 197 SEHNVDRTIDSPGQEETGMTGVSKVIRADQKRFFFDLGNNNRGHFLRISEVA 248
>gi|225435836|ref|XP_002283799.1| PREDICTED: transcription factor Pur-alpha 1-like [Vitis vinifera]
Length = 279
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 67/229 (29%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 15 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYVNS--- 70
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA---Q 428
D + S+ L DT+ ++ D+ +N R RF+ +S+ V S+I PA +
Sbjct: 71 -------DEQDVFSKELQLDTKVFYFDIGENRRGRFLKVSE-ASVSRNRSTIIVPAGSTR 122
Query: 429 DLG-----PIIGLISDLQQEHSCPEDEDGAPE---------------------------- 455
D G I+ I++ + P + P
Sbjct: 123 DEGWAAFRNILAEINEASRLFILPNQQSSEPSERLVGLSDDVGAGFISGHSTQPAPASEL 182
Query: 456 --------------GNY-----MRCNNKRFFFNVSKNGKGTFMRISEIS 485
GN +R + KRFFF++ N +G F+RISE++
Sbjct: 183 NVERSVELPAQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEVA 231
>gi|110735439|ref|NP_000544.2| Werner syndrome ATP-dependent helicase [Homo sapiens]
gi|322510082|sp|Q14191.2|WRN_HUMAN RecName: Full=Werner syndrome ATP-dependent helicase; AltName:
Full=DNA helicase, RecQ-like type 3; Short=RecQ3;
AltName: Full=Exonuclease WRN; AltName: Full=RecQ
protein-like 2
gi|37953299|gb|AAR05448.1| Werner syndrome [Homo sapiens]
Length = 1432
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|119583830|gb|EAW63426.1| Werner syndrome, isoform CRA_c [Homo sapiens]
Length = 1406
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|1280208|gb|AAC41981.1| unnamed protein product [Homo sapiens]
gi|3719421|gb|AAC63361.1| WRN [Homo sapiens]
gi|6272686|gb|AAF06162.1| WRN [Homo sapiens]
gi|60461921|gb|AAX21098.1| Werner syndrome helicase [Homo sapiens]
Length = 1432
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|119583828|gb|EAW63424.1| Werner syndrome, isoform CRA_a [Homo sapiens]
Length = 1405
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|119583829|gb|EAW63425.1| Werner syndrome, isoform CRA_b [Homo sapiens]
Length = 1436
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|356521624|ref|XP_003529454.1| PREDICTED: transcription factor Pur-alpha 1 isoform 1 [Glycine max]
Length = 283
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 67/233 (28%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 19 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYVNS--- 74
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA---Q 428
D + S+ L DT+ ++ D+ +N R RF+ +S+ V S+I PA +
Sbjct: 75 -------DDQDLFSKELQLDTKVFYFDIGENRRGRFLKVSE-ASVSRNRSTIIVPAGSSR 126
Query: 429 DLG--------------------P----------IIGLISDLQ----QEHSC-------- 446
D G P ++GL D+ HS
Sbjct: 127 DEGWAAFRNVLAEINEASRLFILPNQQNSESSERLVGLSDDVGAGFISGHSTQPATSSEL 186
Query: 447 ---------PEDEDG-APEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
P+DE G +R + KRFFF++ N +G F+RISE++ +
Sbjct: 187 NVDRSVDLPPQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEVAGSDR 239
>gi|294464187|gb|ADE77609.1| unknown [Picea sitchensis]
Length = 295
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 68/248 (27%)
Query: 296 KEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVV 355
+E E++ +E++ K Q +K FYFD+K++ +++KISE +R+ I + ++ V
Sbjct: 13 QEMENSGGSDVELL-CKTLQVEHKLFYFDLKENPRGRYLKISE-KTSGSRSTIIVPLAGV 70
Query: 356 GHLRDHLNALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ--- 412
D N + ++ + S+ L DT+ ++ D+ +N R RF+ +S+
Sbjct: 71 VWFVDLFNYYASGNE----------QDLYSKELQLDTKVFYFDVGENQRGRFLKVSEASV 120
Query: 413 -------LLPVG-----------------GKLSSIAFPAQD--------------LGPII 434
++P G + S + P Q +GP
Sbjct: 121 TRNRSTIIVPAGNAKEDGWSAFRDILVEINEASQLLLPPQQPSGPSEHLRALSDAVGP-- 178
Query: 435 GLISDLQQEHS-------------CPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRI 481
G IS + + D G +R KRFFF++ N +G F+RI
Sbjct: 179 GFISGESVQTTSLNGTMGDRAMGLATGDAGGVVMAKVIRAEQKRFFFDLGSNSRGQFLRI 238
Query: 482 SEISTPSK 489
SE++ +
Sbjct: 239 SEVTGADR 246
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 395 YFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAP 454
++ DLK+N R R++ IS+ G S+I P L ++ + DL ++ ++D
Sbjct: 37 FYFDLKENPRGRYLKISE--KTSGSRSTIIVP---LAGVVWFV-DLFNYYASGNEQD--L 88
Query: 455 EGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSKVLTNIGIKSNIKTD 503
++ + K F+F+V +N +G F+++SE S T I N K D
Sbjct: 89 YSKELQLDTKVFYFDVGENQRGRFLKVSEASVTRNRSTIIVPAGNAKED 137
>gi|426359284|ref|XP_004046910.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Gorilla gorilla gorilla]
Length = 1429
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
I +N W PLT D LYAA D
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDA 217
>gi|145509024|ref|XP_001440456.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407673|emb|CAK73059.1| unnamed protein product [Paramecium tetraurelia]
Length = 733
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 30/180 (16%)
Query: 36 LNESKVGLDLEGM-DLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-----LHEVL 89
L S +G+D+E D+G DG++S+V + + ++I DV I D + ++
Sbjct: 55 LKGSIIGVDIEHTNDIGFDGQISIVQIK-DDEDVYIIDVIE---IGVDNQKLINVFKQIF 110
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL--LSQDLVPHTIG 147
E D+I+KV + D L +F I ++N +D + +LS L L + H +
Sbjct: 111 EDDKIIKVFYAGSTDVLWLKRDFQITIQNFFDIKEVADECKLSKISLIFLWKQYCDHQVS 170
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
++K N+Q W RPLT + L+YAA D L L + + +E
Sbjct: 171 ------------KSYKTNMQT------SDWAERPLTQEQLIYAAYDCYYLPYLRYVLLEE 212
>gi|332240842|ref|XP_003269596.1| PREDICTED: Werner syndrome ATP-dependent helicase [Nomascus
leucogenys]
Length = 1433
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNKGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|297789930|ref|XP_002862885.1| pur ALPHA-1 [Arabidopsis lyrata subsp. lyrata]
gi|297826667|ref|XP_002881216.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308649|gb|EFH39144.1| pur ALPHA-1 [Arabidopsis lyrata subsp. lyrata]
gi|297327055|gb|EFH57475.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 60/228 (26%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + S + D N
Sbjct: 24 VELV-SKTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPSSGISWFLDLFNYY 81
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ + + H + S+ L D++ ++ D+ +N R RF+ +S+ ++P
Sbjct: 82 VNSEE----------HELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVP 131
Query: 416 VGGKLSS--IAF---------------------PA-------QDLG----PIIGLISDLQ 441
G AF P+ D+G P G
Sbjct: 132 AGSSPDEGWAAFRNILAEIHEASGLFVMPNKVKPSDGQEHLVDDVGAGFIPGHGSQQPSS 191
Query: 442 QEHSCPE--DEDGAPE--GNYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
EH+ D G E +R + KRFFF++ N +G F+RISE++
Sbjct: 192 SEHNVDRSVDSPGQEETVSKVIRADQKRFFFDLGNNNRGHFLRISEVA 239
>gi|359807554|ref|NP_001241408.1| uncharacterized protein LOC100782805 [Glycine max]
gi|255640975|gb|ACU20767.1| unknown [Glycine max]
Length = 286
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 67/233 (28%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 22 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYVNS--- 77
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA---Q 428
D + S+ L DT+ ++ D+ +N R RF+ +S+ V S+I PA +
Sbjct: 78 -------DDQDLFSKELQLDTKVFYFDIGENRRGRFLKVSE-ASVSRNRSTIIVPAGSSR 129
Query: 429 DLG--------------------P----------IIGLISDLQ----QEHSC-------- 446
D G P ++GL D+ HS
Sbjct: 130 DEGWAAFRNILAEINEASRLFILPNQQNSESSEHLVGLSDDVGAGFISGHSTQPATSSEL 189
Query: 447 ---------PEDEDG-APEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
P+DE G +R + KRFFF++ N +G F+RISE++ +
Sbjct: 190 NVDRSVDLPPQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEVAGSDR 242
>gi|397521446|ref|XP_003830806.1| PREDICTED: Werner syndrome ATP-dependent helicase [Pan paniscus]
Length = 1405
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
I +N W PLT D LYAA D
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDA 217
>gi|306921707|dbj|BAJ17933.1| Werner syndrome, RecQ helicase-like [synthetic construct]
Length = 1432
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|196007028|ref|XP_002113380.1| hypothetical protein TRIADDRAFT_27020 [Trichoplax adhaerens]
gi|190583784|gb|EDV23854.1| hypothetical protein TRIADDRAFT_27020, partial [Trichoplax
adhaerens]
Length = 535
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 20 NLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPL 78
N+IT+ E + + T+ + ++ +DLE G V L+ ++ ++ +I D +
Sbjct: 240 NVITEKDELKDLLETLKSVTEFAVDLEHHSYRSYQGFVCLMQISTRDAD-YIVDTLALRS 298
Query: 79 IMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
++ L+EV +I+K++HGA D L +F I + N++DT A LQ PR
Sbjct: 299 ELW--TLNEVFSDPKIIKILHGADSDIIWLQRDFAIYVVNMFDTGQAARLLQF--PRFSL 354
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
L LLK+ ++ N K +Q W+ RPL +M+ YA D LL
Sbjct: 355 SYL---------LLKYCNVTAN---KGLQLA------DWRIRPLPQEMVQYAREDTHYLL 396
Query: 199 ALFHRMTKE 207
+F +T E
Sbjct: 397 YIFDVLTNE 405
>gi|229442293|gb|AAI72837.1| Werner syndrome protein [synthetic construct]
Length = 281
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
I +N W PLT D LYAA D
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDA 217
>gi|114619614|ref|XP_528104.2| PREDICTED: Werner syndrome ATP-dependent helicase [Pan troglodytes]
Length = 1432
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F + S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
I +N W PLT D LYAA D
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDA 217
>gi|159478793|ref|XP_001697485.1| 3'-5' exonuclease [Chlamydomonas reinhardtii]
gi|158274364|gb|EDP00147.1| 3'-5' exonuclease [Chlamydomonas reinhardtii]
Length = 253
Score = 56.2 bits (134), Expect = 8e-05, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 40/199 (20%)
Query: 32 MATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGK---------IFIFDVYSCPLIMFD 82
+ ++ ++ +D EG+ LG GK+ L+S+A +F+ DV + F
Sbjct: 2 LTSLAGSKQLAVDAEGISLGRTGKLCLLSIAPAPPPGAPADTPAPVFLLDVSALAATAFK 61
Query: 83 GK------------------LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ L EVLE R+ K+++ DA L +RL D Q
Sbjct: 62 HRPAAGTSSGAAGGGGPVRTLQEVLECGRVTKLLYDVRCDAEALYHQHGVRLGGAVDLQL 121
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNF---------KKNIQNLYRENPH 175
A A + P + V + +GL L+ Y +SP K +++ Y +P
Sbjct: 122 AEVAYRRYGPAMRR---VGYVVGLARALETY-LSPELRERWRATRVDKGALRDAYERDPG 177
Query: 176 IWKTRPLTSDMLLYAAADV 194
W RPLT + + YA+ DV
Sbjct: 178 YWDRRPLTQEQVRYASDDV 196
>gi|49118127|gb|AAH73087.1| FFA-1 protein [Xenopus laevis]
Length = 1434
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 33 ATILNESKVGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+++L E +G D+E + G GKV+L+ + + K ++F + P+ F L +L
Sbjct: 65 SSLLEEDVLGFDIEWPPVYTKGKTGKVALIQVCVSEKKCYLFHIS--PMAGFPKGLKRLL 122
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL-VPHTIGL 148
E + + KV G GD L+S++ ++LK ++LS+ + +Q L L
Sbjct: 123 EDESVRKVGVGIEGDQWKLMSDYELKLKGF---------IELSE--MANQKLRCKEKWSL 171
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N L+K FK+ + W PLT D LYAA D + L ++ ++
Sbjct: 172 NGLIKHL------FKEQLIKESSVRCSNWDIFPLTEDQKLYAATDAYAGLLIYKKL 221
>gi|294953663|ref|XP_002787876.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902900|gb|EER19672.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 352
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 39 SKVGLDLEGMDLGVDGKVSLVSLALQNG--KIFIFDVYSCPLIMFDGKLH------EVLE 90
+ + +D EG++L DG +SL L L + +++ D+ F H ++E
Sbjct: 130 TAMAVDFEGLNLSRDGAMSLAQLCLSSDPKSVYVVDITRLGFHAFHTTTHTGTSLKSIME 189
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLND 150
RI KV + D L FN+ +NV+D Q A AL+ + R L+ V + IGL
Sbjct: 190 DARIEKVFYDPRNDVDALYYQFNVAPQNVFDLQLAEVALRRA--RGLT---VRYVIGLFK 244
Query: 151 LL-----KFYKISPNNFKKNIQN----LYRENPH-----IWKTRPLTSDMLLYAAADVES 196
L F + + +F + I + LY E H ++ RPL + +++YA+ DV
Sbjct: 245 CLIAQPELFTQPAMMDFARRINDAGKALY-EPKHGGSFKVFTQRPLHTSIIVYASHDVRY 303
Query: 197 LLALFHRMTKE 207
LL L TK+
Sbjct: 304 LLPLKDLFTKQ 314
>gi|395837912|ref|XP_003791872.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 1 [Otolemur garnettii]
Length = 533
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 41/162 (25%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVA-TNSRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQ---------------------- 240
Query: 146 IGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
+ + + ENP +W TRPL+ +L
Sbjct: 241 ------------------RKLLSCLXENPELWFTRPLSPSLL 264
>gi|440638468|gb|ELR08387.1| hypothetical protein GMDG_03176 [Geomyces destructans 20631-21]
Length = 312
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNG----KIFIFDVYSCPLIMFDGK------LHEVLESD 92
+DLEG+DL +G +S+++L + G ++++FDV+ F+ L ++L+ D
Sbjct: 38 IDLEGVDLCREGSLSILTLMIDTGIPTRRVYLFDVHLLGTHAFNTAGVKQKTLKDILQDD 97
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS--DPRLLS--QDLVPHTIGL 148
+I KVI D+ L ++F +RL+ V D Q +A ++ + LS V L
Sbjct: 98 KIPKVIFDVRNDSDALFTHFGVRLQGVEDVQLMESATRMDTRSRKFLSGLAKCVEKNASL 157
Query: 149 --NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
+DL+ +K++ ++ + + + ++ RP+ +++ Y DV+ L L R K
Sbjct: 158 YGSDLVN-WKLAKEKGERLFKVEHGGSCEVFNQRPIPEEIIAYCVGDVQYLPELRDRFWK 216
Query: 207 EYALKQNRLL 216
A + L+
Sbjct: 217 MRAFRWQDLV 226
>gi|224075952|ref|XP_002304844.1| predicted protein [Populus trichocarpa]
gi|222842276|gb|EEE79823.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 65/229 (28%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N +
Sbjct: 3 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYV----- 56
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA---Q 428
+ D + S+ L DT+ ++ D+ +N R RF+ +S+ V S+I PA +
Sbjct: 57 ---NNSADDQDLFSKELQLDTKVFYFDIGENRRGRFLKVSE-ASVSRNRSTIIVPAGSSR 112
Query: 429 DLG------------------------------PIIGL------------------ISDL 440
D G ++GL S+L
Sbjct: 113 DEGWAAFRNILAEINEASRLFMLPNQQSSETSERLVGLSDDVGAGFISGHSSQSVTTSEL 172
Query: 441 QQEHSC---PEDEDG-APEGNYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
+ S P+DE G +R + KRFFF++ N +G F+RISE++
Sbjct: 173 NVDRSVELPPQDEIGNMAVSKVIRVDQKRFFFDLGSNNRGHFLRISEVA 221
>gi|229891503|sp|P86252.1|PURA_RAT RecName: Full=Transcriptional activator protein Pur-alpha; AltName:
Full=Purine-rich single-stranded DNA-binding protein
alpha
Length = 138
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 333 FIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRYRDTHTIKSEVLIKDT 392
F+KI+EV N++ +SMSV RD+L + + + D + D
Sbjct: 1 FLKIAEVGAGG--NKLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQ------DE 52
Query: 393 RRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLIS-DLQQEHSCPEDED 451
RY++DLK+N R + +Q G+ +IA PAQ GLI L ++ E+
Sbjct: 53 PRYYMDLKENQRGPGLGSTQ-----GQ--TIALPAQ------GLIEFRLIDDYGVEEEPA 99
Query: 452 GAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
PEG + +NKRFFF+V N ++SE+
Sbjct: 100 ELPEGTSLTVDNKRFFFDVGSN------KVSEV 126
>gi|388579133|gb|EIM19461.1| hypothetical protein WALSEDRAFT_61456 [Wallemia sebi CBS 633.66]
Length = 789
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 31/188 (16%)
Query: 39 SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG--KLHEVLESDRIL 95
+++ +DLE D G V L+ ++++ G+ FI D L + D KL++ + I+
Sbjct: 223 TEIAIDLEHHDFRSYRGFVCLMQISIR-GEDFIIDT----LELRDQLIKLNDTFTNPAIV 277
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV HGA D L +F + + N++DT A L S L S L+KF
Sbjct: 278 KVFHGADSDIVWLQRDFGVYIVNMFDTYHATKVLGFSQHSLASL-----------LIKFC 326
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK---EYALKQ 212
+P+ R W+ RPLT+ ML YA +D LL ++ + E + K+
Sbjct: 327 GYTPDK---------RYQRADWRKRPLTNKMLEYARSDTHYLLYIYDMLRNTLIEKSSKK 377
Query: 213 NRLLLDNL 220
N +L D L
Sbjct: 378 NDMLKDVL 385
>gi|296221953|ref|XP_002756974.1| PREDICTED: Werner syndrome ATP-dependent helicase [Callithrix
jacchus]
Length = 1433
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G GKV+L+ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 VGFDMEWPPVYNKGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L+N + T A L+ + L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDVKLENFVELTDVANKKLKCKETWSLN-GLVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ ++
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFVIYRKL 227
>gi|99032230|pdb|2FBT|A Chain A, Wrn Exonuclease
gi|99032231|pdb|2FBV|A Chain A, Wrn Exonuclease, Mn Complex
gi|99032232|pdb|2FBX|A Chain A, Wrn Exonuclease, Mg Complex
gi|99032233|pdb|2FBY|A Chain A, Wrn Exonuclease, Eu Complex
gi|99032234|pdb|2FC0|A Chain A, Wrn Exonuclease, Mn Dgmp Complex
Length = 205
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 48 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 105
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 106 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 163
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ +
Sbjct: 164 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNL 196
>gi|158523201|ref|YP_001531071.1| 3'-5' exonuclease [Desulfococcus oleovorans Hxd3]
gi|158512027|gb|ABW68994.1| 3'-5' exonuclease [Desulfococcus oleovorans Hxd3]
Length = 382
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 26/154 (16%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFN 113
KV L+ + + NG F+ D PL + D L ++KV+HGA D L +F
Sbjct: 46 KVCLIQIGV-NGDAFLID----PLALSDLSSLKPFFADPGVIKVLHGADYDVRSLYRDFG 100
Query: 114 IRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYREN 173
I + ++D++ A S+ L + GLND++ F + R+
Sbjct: 101 ITITGLFDSEIA------------SRFLGVQSTGLNDVVN------RRFGVTMDKGCRK- 141
Query: 174 PHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W RPL ML YAA DV L+ L+H++ E
Sbjct: 142 -QDWTQRPLPEKMLSYAALDVRYLVDLYHQLQNE 174
>gi|301619865|ref|XP_002939304.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Xenopus
(Silurana) tropicalis]
Length = 1431
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 33 ATILNESKVGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+++ E +G D+E + G GKV+L+ + + K ++F + P+ F L +L
Sbjct: 65 SSLQEEDVLGFDIEWPPIYTKGKTGKVALIQVCVSEKKCYLFHI--SPMAGFPKGLRRLL 122
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL-VPHTIGL 148
E + + KV G GD L+S++ ++LK ++LS+ + +Q L L
Sbjct: 123 EDESVKKVGVGIEGDQWKLMSDYELKLKGF---------IELSE--VANQKLRCKEKWSL 171
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N L+K FKK + W PL++D LYAA+D + L ++ ++
Sbjct: 172 NGLVKHL------FKKQLLKDSSIRCSNWDIFPLSTDQKLYAASDAYAGLLIYQKL 221
>gi|320169455|gb|EFW46354.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1559
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 40 KVGLDLEGMDLGVDG----KVSLVSLALQ------NGKIFIFDVYS-CPLIMFDGKLHEV 88
+V +D E + G G ++SLV +A NG +++ D+ S C L +
Sbjct: 758 RVAVDCEWIGDGQPGQEEERLSLVQIAAPATPTHVNGVVYLLDLLSDCAPASIIAPLGVL 817
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIR-LKNVYDTQCAFTALQLSDPRLLSQDL------ 141
L I+KV H A D L + I + N DTQ + LQ S +L+ +
Sbjct: 818 LARQTIVKVFHDARKDVALLTRSTGIAAVHNYADTQAEYAILQ-SLRQLVHNEAGVALVP 876
Query: 142 ------VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
VP +GLN L + + N K +R H+W+ RPL D ++YAA D
Sbjct: 877 SGTGANVPARVGLNALFEQLALPTNPLKATFAARFRTEKHLWQRRPLDRDSIVYAAYDTL 936
Query: 196 SLL 198
LL
Sbjct: 937 HLL 939
>gi|403294330|ref|XP_003938145.1| PREDICTED: Werner syndrome ATP-dependent helicase [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G GKV+L+ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 VGFDMEWPPVYNKGKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++LKN + T A L+ + L+ L+ H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDVKLKNFVELTDVANKKLKCIETWSLN-GLIKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ ++
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRKL 227
>gi|218187924|gb|EEC70351.1| hypothetical protein OsI_01264 [Oryza sativa Indica Group]
Length = 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 70/242 (28%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + ++ V D +
Sbjct: 35 VELV-SKTLQFEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPVAGVAWFLDLFDYY 92
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ + RD S+ L DT+ ++ D+ +N R RF+ +S+ ++P
Sbjct: 93 IRTDE-------RDAF---SKELRLDTKVFYFDIGENKRGRFLKVSEASVNRNRSTIIVP 142
Query: 416 VG--GKLSSIAF--------------------P-AQDLGP---IIGLISDL--------- 440
G G+ AF P Q L P + GL D+
Sbjct: 143 AGSSGEEGWEAFRNVLLEINNEASRLYVLPNHPNQQHLEPPERLPGLSDDVGAGFIAGHG 202
Query: 441 QQEHSCPEDE-----DGAPE--------GNYMRCNNKRFFFNVSKNGKGTFMRISEISTP 487
Q S PE + D P+ +R + KRFFF++ N +G ++RISE++
Sbjct: 203 SQSASGPEVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEVAGA 262
Query: 488 SK 489
+
Sbjct: 263 DR 264
>gi|217072026|gb|ACJ84373.1| unknown [Medicago truncatula]
Length = 187
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D E +DL DG + ++ LA + I++ D ++ + LESD + KVIH
Sbjct: 70 IGFDCEAVDLCRDGALCIIQLAFPDA-IYLVDAIEGGSVLIEA-CKPALESDYVTKVIHD 127
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
D+ L F I+L NV DTQ A++ L+
Sbjct: 128 CKRDSEALYFQFGIKLNNVVDTQIAYSLLE 157
>gi|357129897|ref|XP_003566596.1| PREDICTED: transcription factor Pur-alpha 1-like [Brachypodium
distachyon]
Length = 310
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 70/242 (28%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + ++ V D +
Sbjct: 37 VELV-SKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYY 94
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ D + S+ L DT+ ++ D+ +N R R++ +S+ ++P
Sbjct: 95 IRT----------DERDVFSKELRLDTKVFYFDIGENKRGRYLKVSEASVNRNRSTIIVP 144
Query: 416 VG--GKLSSIAF--------------------PAQD-LGP---IIGLISDL--------- 440
G G+ AF P+Q L P + GL D+
Sbjct: 145 AGSSGEEGWEAFRNVLLEISDEASRLYVLPNHPSQQHLEPPERLPGLSDDVGAGFIAGHA 204
Query: 441 QQEHSCP-------------EDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTP 487
Q S P E+ G +R + KRFFF++ N +G ++RISE++
Sbjct: 205 SQSASGPEVDVERLVDVPPIEEFSGMGLSKVIRADQKRFFFDLGSNNRGHYLRISEVAGA 264
Query: 488 SK 489
+
Sbjct: 265 DR 266
>gi|197927293|ref|NP_001128149.1| Werner syndrome ATP-dependent helicase [Pongo abelii]
gi|55726573|emb|CAH90053.1| hypothetical protein [Pongo abelii]
Length = 1486
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 30/191 (15%)
Query: 41 VGLDLEGMDLGVD---GKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L GKV+L+ L + K ++F + S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYKKRKLGKVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELADVANKKLKCTETWSLNS-LVKHPLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM------TKEYAL 210
I +N W PLT D LYAA D + ++ + + +A+
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNLEILDDTVQRFAI 239
Query: 211 -KQNRLLLDNL 220
K+ +LL N+
Sbjct: 240 NKEEEILLSNM 250
>gi|393216490|gb|EJD01980.1| hypothetical protein FOMMEDRAFT_157145 [Fomitiporia mediterranea
MF3/22]
Length = 324
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 22 ITDVQEAQSAMATILNESK-VGLDLEGMDLG-VDGKVSLVSLALQNGK-IFIFDVYSCP- 77
I +E+ S +L +++ + LD EG DLG G +SL+SL + IF+FD+ P
Sbjct: 4 ICTTEESVSKAVEVLADAEYIILDCEGRDLGSASGALSLISLGTPHASDIFLFDILLLPH 63
Query: 78 ---LIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
I+F+ L + KV+ D L ++ ++NV D LQL+D
Sbjct: 64 HALQILFNAVLSLTPAARAKTKVVWDGRMDYSELFFSYTCPIENVLD-------LQLAD- 115
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKN-IQNLYRENPHIW----KTRPLTSDMLLY 189
+LS+ G ND + ++S F ++ I+ L E H RPL+S++L Y
Sbjct: 116 -ILSR----AKRGQNDKQRLDRLSRRAFPRSEIRKLQLEEVHALNGMDGARPLSSELLSY 170
Query: 190 AAADVESLLALF-HRMTKEY 208
AA+D+ + L+ H + Y
Sbjct: 171 AASDIVRIAGLYDHFLGHGY 190
>gi|452823689|gb|EME30697.1| exosome complex exonuclease RRP6 [Galdieria sulphuraria]
Length = 736
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L ++LE+ ILKV+HGA D L +F + + +++DT A + QL P L
Sbjct: 285 LSKILENGNILKVLHGADSDVQWLQRDFGLYIVHMFDTGQA--SRQLKFPFL-------- 334
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L+ LLK Y N+ K L W+ RPL DM YA D LL ++ R+
Sbjct: 335 --SLSYLLKRYCNIDNSKTKKYYQLAD-----WRIRPLPEDMFSYARQDTHYLLYIYDRL 387
Query: 205 TKEYALKQNRLLLDNLI 221
+E L+Q+ +NL+
Sbjct: 388 CEE--LRQSSNCNNNLL 402
>gi|89267461|emb|CAJ83573.1| Werner syndrome homolog (human) [Xenopus (Silurana) tropicalis]
Length = 1171
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 33 ATILNESKVGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+++ E +G D+E + G GKV+L+ + + K ++F + P+ F L +L
Sbjct: 65 SSLQEEDVLGFDIEWPPIYTKGKTGKVALIQVCVSEKKCYLFHIS--PMAGFPKGLRRLL 122
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL-VPHTIGL 148
E + + KV G GD L+S++ ++LK ++LS+ + +Q L L
Sbjct: 123 EDESVKKVGVGIEGDQWKLMSDYELKLKGF---------IELSE--VANQKLRCKEKWSL 171
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N L+K FKK + W PL++D LYAA+D + L ++ ++
Sbjct: 172 NGLVKHL------FKKQLLKDSSIRCSNWDIFPLSTDQKLYAASDAYAGLLIYQKL 221
>gi|452835556|gb|AGG14045.1| exosome subunit RRP6p-like protein [Leishmania braziliensis]
Length = 735
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
Q+ +A +L S++ +DLE D G L+ ++ + + FI D +M G L
Sbjct: 243 QAMVAKLLLSSEIAVDLEHHDFYSYQGITCLMQISTRE-EDFIVDCLQLRSLM--GTLAP 299
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V + ILKV+HGA D L +F++ L N +DT A L + P+++
Sbjct: 300 VFLNPLILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHM-----------PYSLA 348
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ F ++ N K Q W+ RPL+++M+ YA D LL ++ R+
Sbjct: 349 FA-VDHFCQVKLN---KKFQTA------DWRVRPLSAEMVHYARQDTHFLLYVYDRLKAL 398
Query: 208 YALKQNRLLLDNLI 221
+ R ++ NL+
Sbjct: 399 LLNSEGRAIVGNLL 412
>gi|242052495|ref|XP_002455393.1| hypothetical protein SORBIDRAFT_03g010090 [Sorghum bicolor]
gi|241927368|gb|EES00513.1| hypothetical protein SORBIDRAFT_03g010090 [Sorghum bicolor]
Length = 312
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGH--LRDHLNALLTAHQNTPRHR 376
K FYFDI ++K +F+K+SE ++++ R+ I + G N LL + R
Sbjct: 114 KVFYFDIGENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEASRLY 173
Query: 377 YRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGL 436
H + + + L D+ A F+ G S + P D+ ++ L
Sbjct: 174 VLPNHPNQQHM---EPPERLPGLSDDVGAGFIA-------GHGSQSASGPEVDVDRLVDL 223
Query: 437 ISDLQQEHSCPEDE-DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPSK 489
P++E G +R + KRFFF++ N +G ++RISE++ P +
Sbjct: 224 ---------PPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEVAGPDR 268
>gi|385792618|ref|YP_005825594.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676764|gb|AEB27634.1| Ribonuclease D [Francisella cf. novicida Fx1]
Length = 364
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|291386094|ref|XP_002709593.1| PREDICTED: Werner syndrome protein [Oryctolagus cuniculus]
Length = 1416
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+L+ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 VGFDMEWPPVYTKGKSSRVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LK+ + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GIGIEGDQWKLLRDFDIKLKSFVELTDVANEKLKCAETWSLN-GLVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 195 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYRKL 227
>gi|308473314|ref|XP_003098882.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
gi|308268021|gb|EFP11974.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
Length = 860
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 14 TLMNRTNLITDVQEAQSAMATILNE-SKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIF 71
L N + D +E A+ LN ++ +DLE ++ G L+ ++ ++ + FI
Sbjct: 262 ALKNTQLTMVDTKEKLEALKDTLNSVTEFSVDLEHHEMRTYLGLTCLIQISTRD-EDFII 320
Query: 72 DVYSCPLIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
D P M+D G L+E + +ILKV HGA D L +F I + N++DT A L
Sbjct: 321 D----PFPMWDCIGILNEPFTNPKILKVFHGADNDVLWLQRDFGIHIVNLFDTYVAMKKL 376
Query: 130 QLSDPRLLSQDLVPHTIGLNDLL--KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
+ P+ L D++ K Y+++ W+ RPL + M+
Sbjct: 377 KY--PKF---SLAYLAFRFADVILDKQYQLAD-----------------WRARPLRNAMI 414
Query: 188 LYAAADVESLLALFHRMTKEYALKQNRLLLDNLIY 222
YA D LL + M +E LKQ++ L N++Y
Sbjct: 415 NYAREDTHYLLYSYD-MLREQLLKQDKKDL-NVVY 447
>gi|156502902|ref|YP_001428967.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290953633|ref|ZP_06558254.1| ribonuclease D [Francisella tularensis subsp. holarctica URFT1]
gi|423051113|ref|YP_007009547.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
gi|156253505|gb|ABU62011.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|421951835|gb|AFX71084.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
Length = 363
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|226482448|emb|CAX73823.1| Transcriptional activator protein Pur-alpha [Schistosoma japonicum]
Length = 198
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 315 QCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALL-------T 367
Q K+FY D+K+++ F+KI+EV+ D + +I +++ ++D L L+ +
Sbjct: 42 QVQKKRFYVDVKKNRRGIFMKIAEVSSDGRKARILLTLQAAVEIKDKLKDLIDVLEEIKS 101
Query: 368 AHQNTPRHRYRDTHT---------IKSEVLIKDTRRYFLDLKDNGRARFVTISQL 413
+N+ +T T IKS V+ RRYFLDLK N R F+ ++ L
Sbjct: 102 TDENSAAQNSDETKTPELQVANSLIKSHVVNYPYRRYFLDLKRNKRGHFLRLTML 156
>gi|187931952|ref|YP_001891937.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712861|gb|ACD31158.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
Length = 364
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|89256742|ref|YP_514104.1| ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115315142|ref|YP_763865.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|254368041|ref|ZP_04984061.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|422939063|ref|YP_007012210.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
gi|89144573|emb|CAJ79888.1| Ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115130041|gb|ABI83228.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|134253851|gb|EBA52945.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|407294214|gb|AFT93120.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
Length = 364
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|224056917|ref|XP_002299088.1| predicted protein [Populus trichocarpa]
gi|222846346|gb|EEE83893.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 318 NKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL---LTAHQNTPR 374
N FYFDI +++ +F+K+SE ++ + R+ I I G RD A + A N
Sbjct: 120 NSVFYFDIGENRRGRFLKVSEASVSRNRSTIIIP---AGSSRDEGWAAFRNILAEINEAS 176
Query: 375 HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPII 434
+ + ++V +T + L D+ A F++ G S P +L +
Sbjct: 177 RLF----LLPNQVTCSETSEQLVGLSDDVGAGFIS--------GHSSQSPAPTSELN--V 222
Query: 435 GLISDLQQEHSCPEDEDG-APEGNYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
DL P+DE G +R + KRFFF++ N +G F+RISE++
Sbjct: 223 DRSVDLP-----PQDEIGNLGVSKVIRVDQKRFFFDLGSNNRGHFLRISEVA 269
>gi|56707887|ref|YP_169783.1| ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670358|ref|YP_666915.1| ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|254370381|ref|ZP_04986386.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874700|ref|ZP_05247410.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717133|ref|YP_005305469.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|379725737|ref|YP_005317923.1| ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|385794536|ref|YP_005830942.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|421755410|ref|ZP_16192356.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
gi|56604379|emb|CAG45409.1| Ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320691|emb|CAL08792.1| Ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|151568624|gb|EDN34278.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840699|gb|EET19135.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|282159071|gb|ADA78462.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|377827186|gb|AFB80434.1| Ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|377828810|gb|AFB78889.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|409088212|gb|EKM88289.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
Length = 364
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|194743298|ref|XP_001954137.1| GF18126 [Drosophila ananassae]
gi|190627174|gb|EDV42698.1| GF18126 [Drosophila ananassae]
Length = 909
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 4 KCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVS 60
+ Q Q +L LM+ T L + V++ + A+ + ++ +D+E G LV
Sbjct: 266 QLQKQKPILPNLMSDTELMLVDSVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCLVQ 325
Query: 61 LALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKN 118
++ ++ K +IFD LI+ D L+ VL + LK++HGA D L + ++ + N
Sbjct: 326 MSTRS-KDYIFDT----LILRDEMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVN 380
Query: 119 VYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWK 178
++DT A AL L+ RL L+ H I L D+ K +++ W+
Sbjct: 381 MFDTHRAAKALNLA--RLSLAFLLKHYIDL-DVDKSLQLA-----------------DWR 420
Query: 179 TRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIY 222
RPL ++ YA D L+ ++ RMT + +Q L N +Y
Sbjct: 421 MRPLPQQLVDYARQDTHFLIYVYERMTNDLLEQQVETGLLNNVY 464
>gi|134302344|ref|YP_001122313.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|421752196|ref|ZP_16189228.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|421754061|ref|ZP_16191044.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|421757785|ref|ZP_16194655.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|421759628|ref|ZP_16196457.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|424674949|ref|ZP_18111861.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
gi|134050121|gb|ABO47192.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409085560|gb|EKM85698.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|409085718|gb|EKM85850.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|409090457|gb|EKM90474.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|409091730|gb|EKM91720.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|417434204|gb|EKT89163.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
Length = 364
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|432099984|gb|ELK28878.1| Werner syndrome ATP-dependent helicase [Myotis davidii]
Length = 1398
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+L+ L + K ++F + S + +F L +LE++ I KV
Sbjct: 90 VGFDMEWPPVYSKGKLSRVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENEAIKKV 147
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LK+ + T A L S+ L+ LV H G LLK
Sbjct: 148 GVGIEGDQWKLLRDFDIKLKSFVELTDVANEKLSSSETWSLN-GLVKHLFG-KQLLKDKS 205
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N WK PLT LYAA D + ++ ++
Sbjct: 206 IRCSN---------------WKNYPLTEVQKLYAATDAYAGFIIYQKL 238
>gi|341889055|gb|EGT44990.1| hypothetical protein CAEBREN_17638 [Caenorhabditis brenneri]
Length = 864
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 49/268 (18%)
Query: 16 MNRTNL-ITDVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFD 72
++ T L + D +E A+ +LN K +DLE D+ G L+ ++ ++ + FI D
Sbjct: 266 LDETTLTMVDTKEKLEALRDVLNNVKEFAVDLEHNDMRSYLGLSCLIQISTRD-EDFIID 324
Query: 73 VYSCPLIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
P ++D G L++ + ILKV+HG+ D L +F + + N++DT A L+
Sbjct: 325 ----PFPIWDEIGILNDPFANPTILKVLHGSDNDVLWLQRDFGVHIVNLFDTYVAMKKLK 380
Query: 131 LSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYA 190
P+ LV + L K Y+++ W+ RPL+ M+ YA
Sbjct: 381 F--PKFNLAYLVSRFADVI-LDKQYQLAD-----------------WRARPLSKAMINYA 420
Query: 191 AADVESLLALFHRMTKEYALKQNRLLLDNLIYE-----------TLFN---HVVPLNIR- 235
D LL + M +E LKQN L ++ E +FN ++ + +R
Sbjct: 421 REDTHYLLYCYD-MLREQLLKQNEQDLASMYSECTDVCVRVYKKPVFNPKGYMTEIKLRF 479
Query: 236 ---KRRQFRQNQLRRWRKDLMSSKRPYP 260
R+ + L RWR + ++ P
Sbjct: 480 ALNSRQDYVLTNLYRWRDTVARAEDESP 507
>gi|449310638|gb|AGE92546.1| exosome subunit RRP6p-like protein [Leishmania braziliensis]
Length = 735
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
Q+ +A +L S++ +DLE D G L+ ++ + + FI D +M G L
Sbjct: 243 QAMVAKLLLSSEIAVDLEHHDFYSYQGITCLMQISTRE-EDFIVDCLQLRSLM--GTLAP 299
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V + ILKV+HGA D L +F++ L N +DT A L + P+++
Sbjct: 300 VFLNPLILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHM-----------PYSLA 348
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ F ++ N K Q W+ RPL+++M+ YA D LL ++ R+
Sbjct: 349 FA-VDHFCQVKLN---KKFQTA------DWRVRPLSAEMVHYARQDTHFLLYVYDRLKAL 398
Query: 208 YALKQNRLLLDNLI 221
+ R ++ NL+
Sbjct: 399 LLNSEGRAIVGNLL 412
>gi|261327471|emb|CBH10446.1| ribosomal RNA processing protein 6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 738
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+ V++ ++ +A +LNE+++ +DLE D G L+ ++ + + FI D
Sbjct: 248 FVDTVEDLEAVVAVLLNETEIAVDLEHHDFYSYQGFTCLMQISTRT-QDFIVDCLKVRAN 306
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M+ + V I+KV HGA D L +F + + N++DT A L +
Sbjct: 307 MY--LMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSIALQNLHM-------- 356
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
PH++ + F ++ N + W+ RP+ ++M+ YA D LL
Sbjct: 357 ---PHSLAFA-VDHFCQVKLNKKYQTAD---------WRVRPIPAEMVSYAQQDTHFLLY 403
Query: 200 LFHRM 204
++ R+
Sbjct: 404 VYDRL 408
>gi|154336623|ref|XP_001564547.1| putative exosome subunit rrp6p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061582|emb|CAM38612.1| putative exosome subunit rrp6p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 735
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
Q+ +A +L S++ +DLE D G L+ ++ + + FI D +M G L
Sbjct: 243 QAMVAKLLLSSEIAVDLEHHDFYSYQGITCLMQISTRE-EDFIVDCLQLRSLM--GTLAP 299
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V + ILKV+HGA D L +F++ L N +DT A L + P+++
Sbjct: 300 VFLNPLILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHM-----------PYSLA 348
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ F ++ N K Q W+ RPL+++M+ YA D LL ++ R+
Sbjct: 349 FA-VDHFCQVKLN---KKFQTA------DWRVRPLSAEMVHYARQDTHFLLYVYDRLKAL 398
Query: 208 YALKQNRLLLDNLI 221
+ R ++ NL+
Sbjct: 399 LLNSEGRAIVGNLL 412
>gi|395847404|ref|XP_003796366.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Otolemur garnettii]
Length = 1432
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 34 TILNESKVGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
T+ + VG DLE + G G+V+L+ L + K ++F + + + +F L +LE
Sbjct: 71 TLSDGDVVGFDLEWPPVFRKGKHGRVALIQLCVSESKCYLFHISA--MSVFPQGLKMLLE 128
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLN 149
++ + K G GD LL +F+++LK+ + T A L+ + L+ LV H G
Sbjct: 129 NETVKKAGVGIQGDEWKLLRDFDVKLKSFVELTDVANKKLKCIETWSLN-GLVKHLFG-K 186
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT--KE 207
LLK + ++ W PLT D LYAA D + L ++ ++ E
Sbjct: 187 QLLKDKSVRCSD---------------WSNYPLTEDQKLYAATDAYAGLIIYRKLETWGE 231
Query: 208 YALK 211
ALK
Sbjct: 232 AALK 235
>gi|17531757|ref|NP_496283.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|3874231|emb|CAA90108.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|31747255|gb|AAP57299.1| cell death-related nuclease 3 [Caenorhabditis elegans]
Length = 876
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 2 EAKCQPQNNLLRTLMNRTNL-ITDVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSL 58
EA+ + L T + T L + D +E A+ LN K +DLE + G L
Sbjct: 259 EAQLKSAECLKFTALKDTPLTMIDTKEKLEALTKTLNSVKEFAVDLEHHQMRSYLGLTCL 318
Query: 59 VSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKN 118
+ ++ ++ + FI D + P+ G L+E + RILKV HG+ D L ++ + + N
Sbjct: 319 IQISTRD-EDFIIDPF--PIWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVHVVN 375
Query: 119 VYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL--KFYKISPNNFKKNIQNLYRENPHI 176
++DT A L+ P+ L T+ D++ K Y+++
Sbjct: 376 LFDTYVAMKKLKY--PKF---SLAYLTLRFADVVLDKQYQLAD----------------- 413
Query: 177 WKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYET 224
W+ RPL + M+ YA D LL + M +E LKQ+ L N+ E+
Sbjct: 414 WRARPLRNAMINYAREDTHYLLYSYD-MLREQLLKQDTKDLANVYSES 460
>gi|354474937|ref|XP_003499686.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Cricetulus griseus]
gi|344242328|gb|EGV98431.1| Werner syndrome ATP-dependent helicase-like [Cricetulus griseus]
Length = 1405
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
+G D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 79 IGFDMEWPPIYKHGKRNRVAVIQLCMSESKCYLFHISS--MSVFPQGLKMLLENKSIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F I+L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFEIKLESFVELTDIANEKLKCAETWSLN-GLVKHILG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
I +N W PLT D LYAA D + LA++ ++
Sbjct: 195 IRCSN---------------WSNFPLTDDQKLYAATDAYAGLAIYEKLA 228
>gi|168013162|ref|XP_001759270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689583|gb|EDQ75954.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 282
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 66/228 (28%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE +R+ I + ++ + D N +
Sbjct: 14 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSGSRSTIIVPVAGIVWFVDLFNYYANGEEE 72
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLPVGGKLS 421
+ S+ L DT+ ++ D+ +N R RF+ +S+ ++P G
Sbjct: 73 -----------LSSKELQLDTKVFYFDVGENQRGRFLKVSEASVTRNRSTIIVPAGNAAD 121
Query: 422 S------------------IAFPAQDLGPI---IGLISD-------------LQQEHSCP 447
+ P+ GP+ +G+++D + P
Sbjct: 122 EGWSSFRNILVEIHEASQLLLPPSASSGPLQEHMGVMADNVGAGYLPSTSSPPASASTVP 181
Query: 448 EDEDGAP----EGNYM------RCNNKRFFFNVSKNGKGTFMRISEIS 485
E G+P G + R K+FFF++ N +G ++RISE++
Sbjct: 182 LPEVGSPNVASSGGGLATARVIRAEQKKFFFDLGSNARGQYLRISEVT 229
>gi|57340046|gb|AAW50010.1| hypothetical protein FTT0776 [synthetic construct]
Length = 399
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 44 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 99
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 100 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 146
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 147 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 192
>gi|118497275|ref|YP_898325.1| ribonuclease D [Francisella novicida U112]
gi|194323578|ref|ZP_03057355.1| ribonuclease D [Francisella novicida FTE]
gi|208779068|ref|ZP_03246414.1| ribonuclease D [Francisella novicida FTG]
gi|118423181|gb|ABK89571.1| ribonuclease D [Francisella novicida U112]
gi|194322433|gb|EDX19914.1| ribonuclease D [Francisella tularensis subsp. novicida FTE]
gi|208744868|gb|EDZ91166.1| ribonuclease D [Francisella novicida FTG]
Length = 364
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E I+
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLEDLEF-KKLKEIFEDKDII 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|71027523|ref|XP_763405.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350358|gb|EAN31122.1| hypothetical protein TP03_0385 [Theileria parva]
Length = 996
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 28/199 (14%)
Query: 18 RTNLITDVQEAQSAMATILNESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSC 76
R +I + + S + + N + LD+E D G + LV L+ +I D
Sbjct: 471 RYKIIDNEADFNSMLDKLKNIRVLSLDVEHHDTETYRGFICLVQLSTPEEN-YIID---- 525
Query: 77 PLIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
P +F KL+ + +ILK++HGA D L +FNI + N++DT+ A L L++
Sbjct: 526 PFKIFGKMNKLNRLTTDPKILKIMHGASNDVVWLQRDFNIFVVNLFDTREAAKVLNLAEQ 585
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
L I LN K +++S W RPL ++ML YA D
Sbjct: 586 SLAKLIQKYFNIKLN---KRFQLSD-----------------WSKRPLDAEMLDYACCDS 625
Query: 195 ESLLALFHRMTKEYALKQN 213
L+ L+ + E K++
Sbjct: 626 HYLIPLYSALKDEILSKED 644
>gi|294886215|ref|XP_002771614.1| hypothetical protein Pmar_PMAR014646 [Perkinsus marinus ATCC 50983]
gi|239875320|gb|EER03430.1| hypothetical protein Pmar_PMAR014646 [Perkinsus marinus ATCC 50983]
Length = 463
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNG--KIFIFDVYSCPLIMFDGKLH------EVLESDRI 94
+D EG++L DG +SL L L + +++ D+ F H ++E RI
Sbjct: 279 VDFEGLNLSRDGAMSLAQLCLSSDPRSVYVVDITRLGFHAFHATTHTGTSLKSIMEDSRI 338
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL-- 152
KV + D L FN+ +NV+D Q A AL+ + R L+ V + IGL L
Sbjct: 339 EKVFYDPRNDVDALYYQFNVAPQNVFDLQLAEVALRRA--RGLT---VRYVIGLFKCLVQ 393
Query: 153 --KFYKISPNNFKKNIQNLYR---ENPH-----IWKTRPLTSDMLLYAAADVESLLALF 201
F + F I ++ + E H ++ RPL +++YA+ DV LL L+
Sbjct: 394 SEVFVQPGLREFAMWINDIGKALFEPKHGGSYKVFTERPLHPGIIVYASHDVRYLLPLY 452
>gi|449548764|gb|EMD39730.1| hypothetical protein CERSUDRAFT_112032 [Ceriporiopsis subvermispora
B]
Length = 850
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 32 MATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
+A + ++ LDLE G V L+ ++ + + FI DV M +L+EVL
Sbjct: 253 LAHLRTAQEIALDLEHHSFRSFGGFVCLMQISTRE-RDFIVDVLQVREEM--EELNEVLT 309
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLND 150
RI+KV+HGA D L +FN+ + N++DT A L+ PR H +G
Sbjct: 310 DPRIVKVLHGAESDIVWLQQDFNLYVVNLFDTYHASKVLEF--PR--------HNLGT-- 357
Query: 151 LLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
LL+ Y +P+ + + + W+ RPL +ML YA +D LL ++
Sbjct: 358 LLEMYCDFTPDK-RYQLAD--------WRIRPLPEEMLQYARSDTHFLLYIY 400
>gi|254372648|ref|ZP_04988137.1| ribonuclease III [Francisella tularensis subsp. novicida GA99-3549]
gi|151570375|gb|EDN36029.1| ribonuclease III [Francisella novicida GA99-3549]
Length = 364
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E I+
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDII 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|254374109|ref|ZP_04989591.1| ribonuclease D [Francisella novicida GA99-3548]
gi|151571829|gb|EDN37483.1| ribonuclease D [Francisella novicida GA99-3548]
Length = 364
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E I+
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDII 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L YA DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|385304629|gb|EIF48639.1| putative nuclear exosome component rrp6p [Dekkera bruxellensis
AWRI1499]
Length = 607
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 18 RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSC 76
+ + +V++ ++ ++ + +G+DLE D G SL+ ++ GK +I D S
Sbjct: 194 QPGWVDNVEQLKALLSELEKCKVIGVDLEHHDYRTYHGLTSLMQISTDTGKDYIVDPLSA 253
Query: 77 PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
L L+ V + I+KV HGAF D L + + + +++DT A L L
Sbjct: 254 QLRPHLSLLNIVFTNPDIIKVFHGAFMDMMWLQRDLGLYVVSLFDTYWAAKELTLG---- 309
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
L LL+ Y + K + + W+ RPL +M YA AD
Sbjct: 310 --------KYSLAFLLEKYIHFRTSKKWQLAD--------WRIRPLGPEMRNYAKADTHF 353
Query: 197 LLALFHRMTKE 207
L+ LF ++ E
Sbjct: 354 LIELFGKIQXE 364
>gi|14250912|emb|CAC39261.1| Rrp6p homologue [Trypanosoma brucei]
Length = 703
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+ V++ ++ +A +LNE+++ +DLE D G L+ ++ + + FI D
Sbjct: 215 FVDTVEDLEALVAVLLNETEIAVDLEHHDFYSYQGFTCLMQISTRT-QDFIVDCLKVRAN 273
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M+ + V I+KV HGA D L +F + + N++DT A L +
Sbjct: 274 MY--LMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSIALQNLHM-------- 323
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
PH++ + F ++ N + W+ RP+ ++M+ YA D LL
Sbjct: 324 ---PHSLAFA-VDHFCQVKLNKKYQTAD---------WRVRPIPAEMVSYAQQDTHFLLY 370
Query: 200 LFHRM 204
++ R+
Sbjct: 371 VYDRL 375
>gi|294883486|ref|XP_002770958.1| hypothetical protein Pmar_PMAR007114 [Perkinsus marinus ATCC 50983]
gi|239874096|gb|EER02774.1| hypothetical protein Pmar_PMAR007114 [Perkinsus marinus ATCC 50983]
Length = 469
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNG--KIFIFDVYSCPLIMFDGKLH------EVLESDRI 94
+D EG++L DG +SL L L + +++ D+ H ++E RI
Sbjct: 279 VDFEGLNLSRDGAMSLAQLCLSSDPRSVYVVDITRLGFHASHATTHTGTSLKSIMEDSRI 338
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL-- 152
KV + D L FN+ +NV+D Q A AL+ + R L+ V + IGL L
Sbjct: 339 EKVFYDPRNDVDALYYQFNVAPQNVFDLQLAEVALRRA--RGLT---VRYVIGLFKCLVQ 393
Query: 153 --KFYKISPNNFKKNIQNLYR---ENPH-----IWKTRPLTSDMLLYAAADVESLLALFH 202
F + F I ++ + E H ++ RPL +++YA+ DV LL L+
Sbjct: 394 SEVFVQPGLREFAMWINDIGKALFEPKHGGSYKVFTERPLHPGIIVYASHDVRYLLPLYD 453
Query: 203 RMTKE 207
TK+
Sbjct: 454 AFTKQ 458
>gi|403289409|ref|XP_003935851.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 523
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG+++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAMLHIKKQSVLSVAAEGVNVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+LE RILKVIH + L + I L NV+DTQ
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQ 240
>gi|72387778|ref|XP_844313.1| ribosomal RNA processing protein 6 [Trypanosoma brucei TREU927]
gi|62359465|gb|AAX79902.1| ribosomal RNA processing protein 6 [Trypanosoma brucei]
gi|70800846|gb|AAZ10754.1| ribosomal RNA processing protein 6 [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 736
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+ V++ ++ +A +LNE+++ +DLE D G L+ ++ + + FI D
Sbjct: 248 FVDTVEDLEALVAVLLNETEIAVDLEHHDFYSYQGFTCLMQISTRT-QDFIVDCLKVRAN 306
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M+ + V I+KV HGA D L +F + + N++DT A L +
Sbjct: 307 MY--LMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSIALQNLHM-------- 356
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
PH++ + F ++ N + W+ RP+ ++M+ YA D LL
Sbjct: 357 ---PHSLAFA-VDHFCQVKLNKKYQTAD---------WRVRPIPAEMVSYAQQDTHFLLY 403
Query: 200 LFHRM 204
++ R+
Sbjct: 404 VYDRL 408
>gi|254369642|ref|ZP_04985652.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122601|gb|EDO66730.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
Length = 364
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N S++ +D E + ++ LV LA +N +IF+ D + + F KL E+ E IL
Sbjct: 18 NTSQIAVDTEFYWMRTYYPELCLVQLATEN-EIFLID--TLKDLEF-KKLKEIFEDKDIL 73
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+IH A D + FN + N++DTQ A T L L LLK
Sbjct: 74 KIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQS-----------SLKTLLK-- 120
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+I +K Q W+ RPLT + L Y+ DVE L+ L KEY +Q
Sbjct: 121 EILDIEIEKESQ------FSDWRNRPLTQNQLNYSIKDVEYLIQL-----KEYLQQQ 166
>gi|327279914|ref|XP_003224700.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Anolis
carolinensis]
Length = 1327
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 28 AQSAMATILNESKVGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK 84
A+ ++ + + + +G D+E + G +GKV+L+ L K ++F + S + F G
Sbjct: 60 AEDIISMLPDGAVLGFDIEWTPVFTKGKEGKVALIQLCESEEKCYLFHISS--MSNFPGG 117
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L +LE + I K+ G GD L+ +F + L ++ D L++ +L +++
Sbjct: 118 LKRLLEDNHIKKIGVGIEGDKWKLMRDFEVNLGDLVDLA------DLANKKLRCKEI--- 168
Query: 145 TIGLNDLLKFYKISPNNFKKNI--QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
LNDL+K F K + + L R W+ PLT + LYAA D + ++
Sbjct: 169 -WSLNDLVKHL------FHKQLLKEKLVRCGN--WEEFPLTEEQKLYAATDAYAGFLIYK 219
Query: 203 RM 204
++
Sbjct: 220 KL 221
>gi|345781559|ref|XP_539984.3| PREDICTED: Werner syndrome ATP-dependent helicase [Canis lupus
familiaris]
Length = 1412
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGV---DGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + +V+L+ L + K ++F + S + +F L +LE++ I K
Sbjct: 79 VGFDMEWPPVYTKRKPSRVALIQLCVSENKCYLFHISS--MSVFPQGLKMLLENEAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I LKN + T A L+ ++ L+ LV H G LLK
Sbjct: 137 GVGIKGDQRKLLCDFDIDLKNFVELTDVANEKLKCTETWSLN-GLVKHLFG-KQLLKDRS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 195 IRCSN---------------WGDFPLTEDQKLYAATDAYAGLIIYQKL 227
>gi|350593451|ref|XP_003133429.3| PREDICTED: Werner syndrome ATP-dependent helicase [Sus scrofa]
Length = 1443
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G G+++L+ L + K ++F + S + +F L +LE++ I K
Sbjct: 79 VGFDMEWPPVYNKGKLGRIALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENEAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LK+ + T A L+ ++ L+ LV H LLK
Sbjct: 137 GVGIKGDQSKLLRDFDIKLKSFVELTDVANEKLKCAETWSLN-GLVKHLFS-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ ++
Sbjct: 195 IRCSN---------------WSNFPLTEDQKLYAATDAYAGFIIYQKL 227
>gi|384501951|gb|EIE92442.1| hypothetical protein RO3G_16964 [Rhizopus delemar RA 99-880]
Length = 599
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 17 NRTNLITDVQEAQSAMATILNE-SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVY 74
N + + D + M L + ++ +DLE + G L+ L+ +N + FI D
Sbjct: 227 NTSYIWVDTEAGLEEMMKALEDVEEIAVDLEHHNYRSYQGFTCLMQLSTRN-QDFIIDTL 285
Query: 75 SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
++ +L+E I+KV+HGA D L +F + L N++DT L+
Sbjct: 286 ELRDKLW--RLNEYFADPTIVKVLHGADSDVIWLQRDFGLYLVNLFDTYFPTKVLEF--- 340
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
PH GL LLK Y + K + + W+ RPL +ML+YA AD
Sbjct: 341 --------PHH-GLAYLLKRYCNYDADKKYQLAD--------WRIRPLPQEMLMYARADT 383
Query: 195 ESLLALFHRMTKE 207
LL ++ + E
Sbjct: 384 HFLLYIYDCLRNE 396
>gi|50286743|ref|XP_445801.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525107|emb|CAG58720.1| unnamed protein product [Candida glabrata]
Length = 737
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 48/270 (17%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIM 80
+ ++ Q M + S++ +DLE D G V L+ ++ + + +I D + +
Sbjct: 216 VDNINSLQDMMQELKKSSEIAVDLEHHDFRSYYGLVCLMQISTRT-QDYIVDTIA---LR 271
Query: 81 FDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
D K L+EV + I KV HGAF D L + + + +++DT A AL L P+
Sbjct: 272 DDLKMLNEVFTNPLITKVFHGAFMDIIWLQRDLGLYIVSLFDTFHASKALGL--PK---- 325
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
H++ LL+ Y NFK + + + W+ RPL+ M+ YA AD LL
Sbjct: 326 ----HSLAY--LLEKYA----NFKTSKKYQLAD----WRRRPLSKAMMAYARADTHFLLN 371
Query: 200 LFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPY 259
+F +M +N L+ + L R+ R LRR+ K P
Sbjct: 372 IFDQM-------RNGLISSGKLAGVL------------RESRNVALRRFEYSKYKPKIPV 412
Query: 260 PYIEEVNSNEYIWRN---DYNVPLANAKLL 286
I E WR YN+P+ L+
Sbjct: 413 ANIFTPVEKESPWRTLMYQYNIPVDKEPLI 442
>gi|327291874|ref|XP_003230645.1| PREDICTED: exosome component 10-like, partial [Anolis carolinensis]
Length = 329
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV+HGA D L +F + L NV+DT A A QLS R H
Sbjct: 136 LNETFTDPAIIKVLHGADSDVEWLQRDFGLYLVNVFDTHQA--ARQLSLGR--------H 185
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + + + W+ RPL +ML YA D LL ++ R+
Sbjct: 186 S--LDHLLKLYCNVDANKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDRV 235
Query: 205 TKEYALKQNRL 215
E + N L
Sbjct: 236 RTELWERGNEL 246
>gi|340380967|ref|XP_003388993.1| PREDICTED: exosome component 10-like [Amphimedon queenslandica]
Length = 724
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 1 MEAKCQPQNNLLRTLMNRTNLITDVQEAQSAMATILNE----SKVGLDLEGMDL-GVDGK 55
+E++ Q + + + T LI E Q + + +NE +++ +DLE G
Sbjct: 211 LESQTQIKEPQVYKSLEDTPLIFVNDEGQ--LLSFINELKGVTEIAIDLEAHSYRSFQGF 268
Query: 56 VSLVSLALQNGKIFIFDVYSC-PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
V L+ ++ + +I D S P + L+EV + I+KV+HGA D L +F +
Sbjct: 269 VCLMQVSTRTTD-YIIDTLSLRPHLHL---LNEVFTNPNIIKVMHGADWDIPWLQRDFGV 324
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
+ N++DT A L L PR L+ + G+ K Y+++
Sbjct: 325 YIVNLFDTGQACRTLGL--PRYSLAFLLSYCCGVT-ANKQYQLA---------------- 365
Query: 175 HIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQN 213
W+ RPL DM+ YA D LL ++ R+ E + N
Sbjct: 366 -DWRIRPLPEDMIKYAREDTHYLLYVYDRLRNELIRRSN 403
>gi|398343905|ref|ZP_10528608.1| ribonuclease III [Leptospira inadai serovar Lyme str. 10]
Length = 389
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
++ +++ Q A+ T+ + +D E KV L+ ++ GK +IFD P+
Sbjct: 9 VVDNIRSLQLALITLAQSDCISIDTESSGYYTYYSKVCLIQIS-SKGKNYIFD----PIR 63
Query: 80 MFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
+ D L + E+ ILK+ H A D L +F+ + N+ DT + L L LL
Sbjct: 64 LADVSGLGPLFENPAILKIFHSASDDIKALKRDFSFKFVNIADTMFSSRLLDLEQNSLLY 123
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
LV H ++K+ + +E W+ RPL L YAA D L
Sbjct: 124 --LVEH---------YHKVKLSK---------KEQKSNWEKRPLDKSQLQYAALDTVYLE 163
Query: 199 ALFHRMTKEYALKQNRLLLDNLIYE 223
+++ +M +E A R LL+ + E
Sbjct: 164 SIWEKMREELA---KRKLLEEALSE 185
>gi|294953661|ref|XP_002787875.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902899|gb|EER19671.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 356
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNG--KIFIFDVYSCPLIMFDGKLH------EVLESDRI 94
+D EG++L DG +SL L L + +++ D+ F H ++E I
Sbjct: 139 MDFEGLNLSRDGAMSLAQLCLSSDPKSVYVVDITRLGFHAFHATTHTGTSLKSIMEDTLI 198
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL-- 152
KV + D L FN+ +NV+D Q A AL+ + R L+ V + IGL L
Sbjct: 199 EKVFYDPRHDVDALYYQFNVAPQNVFDLQLAEVALRRA--RGLT---VRYVIGLFKCLVQ 253
Query: 153 --KFYKISPNNFKKNIQNLYR---ENPH-----IWKTRPLTSDMLLYAAADVESLLALFH 202
F + +F I ++ + E H ++ RPL +++YA+ D LL L+
Sbjct: 254 SEVFVQPELRDFATRINDIGKALFEPKHGGSYKVFTERPLHPGIIVYASHDARYLLPLYD 313
Query: 203 RMTKE 207
TK+
Sbjct: 314 TFTKQ 318
>gi|195570818|ref|XP_002103401.1| GD20396 [Drosophila simulans]
gi|194199328|gb|EDX12904.1| GD20396 [Drosophila simulans]
Length = 896
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 4 KCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVS 60
+ Q Q +L LM T L + V++ + A+ + ++ +D+E G LV
Sbjct: 254 QLQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCLVQ 313
Query: 61 LALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKN 118
++ ++ K +IFD LI+ D L+ VL + LK++HGA D L + ++ + N
Sbjct: 314 MSTRS-KDYIFDT----LILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVN 368
Query: 119 VYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWK 178
++DT A AL ++ RL L+ H + L D+ K +++ W+
Sbjct: 369 MFDTHRAAKALNMA--RLSLAYLLKHYLDL-DVDKSLQLA-----------------DWR 408
Query: 179 TRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYE 223
RPL ++ YA D L+ ++ RMT + +Q L +Y+
Sbjct: 409 MRPLPQQLVDYARQDTHFLIYVYERMTNDLLQQQAEPGLLGSVYQ 453
>gi|403360645|gb|EJY80003.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 701
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE--- 87
++ T+ + +G+DLEG L + G ++L+ +A + I+IFD+Y + D L +
Sbjct: 459 SLRTMKKQKSLGVDLEGR-LKIGGNINLIQIACEE-IIYIFDMYQIQKLSQDEGLLQLTI 516
Query: 88 -----VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL-QLSD----PRLL 137
V I KV D L + N YDTQ L QL + +L
Sbjct: 517 QVLKCVFLDSGIRKVFFDGKKDVEALHFILGVGCNNYYDTQALHMVLTQLKEMQKNKKLF 576
Query: 138 SQDLVPHTIGLNDLLKFYKIS------PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAA 191
P T GLND+L ++++ N FK I + Y++ + TRP+ D + Y+A
Sbjct: 577 EIKHSP-TPGLNDVLGKHEVAHGLNSLKNKFKA-IFDDYQQCKVYFTTRPIDPDFVSYSA 634
Query: 192 ADVESLLAL 200
DV+ L L
Sbjct: 635 QDVQDLSEL 643
>gi|347967581|ref|XP_003436085.1| AGAP002300-PB [Anopheles gambiae str. PEST]
gi|333468394|gb|EGK96928.1| AGAP002300-PB [Anopheles gambiae str. PEST]
Length = 988
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 16 MNRTNLITDVQEAQSAMATILNE----SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFI 70
+ RT L+ QE+Q +A ++ E ++ +DLE G L+ L+ + K +I
Sbjct: 261 LERTPLMYVDQESQ--LAELVRELQAAKEIAIDLEHHSYRSYQGFTCLMQLSTRT-KDYI 317
Query: 71 FDVYSCPLIMFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
D L + D +LH EV + LKV+HG+ D L + + L N++DT A
Sbjct: 318 VDA----LALRD-ELHVLNEVFTDPKKLKVLHGSVSDIEWLQRDLGLYLVNMFDTGEAAR 372
Query: 128 ALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
LQ S IGL LLK Y NI W+ RP+ + +
Sbjct: 373 VLQFS------------RIGLQFLLKHY--------CNIDTDKAFQLADWRIRPIPENFI 412
Query: 188 LYAAADVESLLALFHRMTKEYALKQNRLL 216
YA D LL ++ RM E K LL
Sbjct: 413 EYARKDTHYLLYIYDRMRNELLEKGESLL 441
>gi|83285930|ref|XP_729939.1| 3'-5' exonuclease [Plasmodium yoelii yoelii 17XNL]
gi|23489160|gb|EAA21504.1| 3'-5' exonuclease, putative [Plasmodium yoelii yoelii]
Length = 284
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 67 KIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
K +IFD+ + +I + +++E+ + LKVIH D+ L + +I+ +NVYDT
Sbjct: 16 KYYIFDLLNKSVI---NSVKKIIENKKTLKVIHDCREDSSALYNQLDIKFENVYDT---L 69
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
A L + D+ + I +LL Y ++ NI+ +N IW+ RPL+
Sbjct: 70 RAHMLLLEKKKENDI--YQISFLNLLHDYLGVKDDCLNNIKKEMYKNEKIWEIRPLSKIS 127
Query: 187 LLYAAADVESLLALF 201
++YA +V+ LL ++
Sbjct: 128 IIYALKNVKYLLPIY 142
>gi|389581646|ref|ZP_10171673.1| ribonuclease D [Desulfobacter postgatei 2ac9]
gi|389403281|gb|EIM65503.1| ribonuclease D [Desulfobacter postgatei 2ac9]
Length = 404
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 38/202 (18%)
Query: 41 VGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMFDG-KLHEVLESDRILKVI 98
+G+DLE + K+ L+ +A N + ++ D P ++ D +LE+ I+KV
Sbjct: 53 IGVDLEADSMHCFSEKICLIQIAGPN-QAWLLD----PFLINDFLPFSRILENPEIIKVF 107
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKIS 158
HG+ D L ++ ++N++DT+ A L + + GL LLK +
Sbjct: 108 HGSDFDVRSLDRELSVEIENLFDTEIACRFLNIKER------------GLGALLKSF--- 152
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRL--- 215
F ++ Y++ W RPL +M+ Y+ DV +L+ L H + KE K RL
Sbjct: 153 ---FDIDVDKKYQKVD--WSKRPLKEEMIAYSVGDVATLVDL-HDLLKERLEKIGRLAWA 206
Query: 216 -----LLDNLIYETLFNHVVPL 232
L + YE+ NH PL
Sbjct: 207 EEEFELQARVKYES--NHSRPL 226
>gi|194900862|ref|XP_001979974.1| GG21034 [Drosophila erecta]
gi|190651677|gb|EDV48932.1| GG21034 [Drosophila erecta]
Length = 900
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 4 KCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVS 60
+ Q Q +L LM T L + V++ Q A+ + ++ +D+E G LV
Sbjct: 254 QLQKQKPVLPALMADTELMVVDTVEKLQQALEELRQAPQIAIDVEHHSYRTFMGITCLVQ 313
Query: 61 LALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKN 118
++ ++ K +IFD LI+ + L+ VL + LK++HGA D L + ++ + N
Sbjct: 314 MSTRS-KDYIFDT----LILREDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVN 368
Query: 119 VYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWK 178
++DT A AL L+ + L LLK+Y + K++Q W+
Sbjct: 369 MFDTHRAAKALNLA------------RLSLAYLLKYYLDL--DVDKSLQLA------DWR 408
Query: 179 TRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYE 223
RPL ++ YA D L+ ++ RMT + +Q L +Y+
Sbjct: 409 MRPLPQQLVDYARQDTHFLIYVYERMTNDLLQQQTDTGLLASVYQ 453
>gi|347967577|ref|XP_312669.5| AGAP002300-PA [Anopheles gambiae str. PEST]
gi|333468393|gb|EAA07463.5| AGAP002300-PA [Anopheles gambiae str. PEST]
Length = 992
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 16 MNRTNLITDVQEAQSAMATILNE----SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFI 70
+ RT L+ QE+Q +A ++ E ++ +DLE G L+ L+ + K +I
Sbjct: 265 LERTPLMYVDQESQ--LAELVRELQAAKEIAIDLEHHSYRSYQGFTCLMQLSTRT-KDYI 321
Query: 71 FDVYSCPLIMFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFT 127
D L + D +LH EV + LKV+HG+ D L + + L N++DT A
Sbjct: 322 VDA----LALRD-ELHVLNEVFTDPKKLKVLHGSVSDIEWLQRDLGLYLVNMFDTGEAAR 376
Query: 128 ALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDML 187
LQ S IGL LLK Y NI W+ RP+ + +
Sbjct: 377 VLQFS------------RIGLQFLLKHY--------CNIDTDKAFQLADWRIRPIPENFI 416
Query: 188 LYAAADVESLLALFHRMTKEYALKQNRLL 216
YA D LL ++ RM E K LL
Sbjct: 417 EYARKDTHYLLYIYDRMRNELLEKGESLL 445
>gi|170763502|ref|NP_035851.3| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|170763504|ref|NP_001116294.1| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|342187359|sp|O09053.3|WRN_MOUSE RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN
gi|3885838|gb|AAC78077.1| Wrn protein [Mus musculus]
gi|29748014|gb|AAH50921.1| Wrn protein [Mus musculus]
gi|38173728|gb|AAH60700.1| Wrn protein [Mus musculus]
Length = 1401
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|189182142|gb|ACD81847.1| LD13130p [Drosophila melanogaster]
Length = 930
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 2 EAKCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSL 58
E + Q Q +L LM T L + V++ + A+ + ++ +D+E G L
Sbjct: 282 EEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCL 341
Query: 59 VSLALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRL 116
V ++ ++ K +IFD LI+ D L+ VL + LK++HGA D L + ++ +
Sbjct: 342 VQMSTRS-KDYIFDT----LILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYI 396
Query: 117 KNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI 176
N++DT A AL ++ RL L+ H + L D+ K +++
Sbjct: 397 VNMFDTHRAAKALNMA--RLSLAYLLKHYLDL-DVDKSLQLA-----------------D 436
Query: 177 WKTRPLTSDMLLYAAADVESLLALFHRMT 205
W+ RPL ++ YA D L+ ++ RMT
Sbjct: 437 WRMRPLPQQLVDYARQDTHFLIYVYGRMT 465
>gi|383792210|gb|AFH41845.1| FI19715p1 [Drosophila melanogaster]
Length = 930
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 2 EAKCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSL 58
E + Q Q +L LM T L + V++ + A+ + ++ +D+E G L
Sbjct: 282 EEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCL 341
Query: 59 VSLALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRL 116
V ++ ++ K +IFD LI+ D L+ VL + LK++HGA D L + ++ +
Sbjct: 342 VQMSTRS-KDYIFDT----LILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYI 396
Query: 117 KNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI 176
N++DT A AL ++ RL L+ H + L D+ K +++
Sbjct: 397 VNMFDTHRAAKALNMA--RLSLAYLLKHYLDL-DVDKSLQLA-----------------D 436
Query: 177 WKTRPLTSDMLLYAAADVESLLALFHRMT 205
W+ RPL ++ YA D L+ ++ RMT
Sbjct: 437 WRMRPLPQQLVDYARQDTHFLIYVYGRMT 465
>gi|336369802|gb|EGN98143.1| hypothetical protein SERLA73DRAFT_91376 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382569|gb|EGO23719.1| hypothetical protein SERLADRAFT_450051 [Serpula lacrymans var.
lacrymans S7.9]
Length = 879
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 20/118 (16%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
+L+EV RI+KV HGA D L +FN+ + N++DT A A+ P+
Sbjct: 307 ELNEVFTDPRIVKVFHGAESDIVWLQQDFNLYIVNLFDTFHASKAIGF--PKH------- 357
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
GL LL+ Y +F + Q + W+ RPL +ML YA +D LL ++
Sbjct: 358 ---GLASLLEMY----CDFTPDKQYQLAD----WRMRPLPDEMLAYARSDTHYLLFIY 404
>gi|115390535|ref|XP_001212772.1| predicted protein [Aspergillus terreus NIH2624]
gi|114193696|gb|EAU35396.1| predicted protein [Aspergillus terreus NIH2624]
Length = 266
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 43 LDLEGMDLGVDGKVSLVSL-ALQNGKIFIFDVYSCPLIMFDG-------KLHEVLESDRI 94
LDLEG++LG +G +S++SL A+ I++ DVY F L LES I
Sbjct: 38 LDLEGVNLGRNGSISILSLYAVHKKTIYLVDVYKLGKAAFSNPQPDKHTSLRANLESPSI 97
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
KV+ D+ L S++NIRL + D Q
Sbjct: 98 KKVLFDVRNDSDALFSHYNIRLDGIQDLQ 126
>gi|270012325|gb|EFA08773.1| hypothetical protein TcasGA2_TC006462 [Tribolium castaneum]
Length = 421
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 40 KVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH---EVLESDRILK 96
++G+D+E D G LV ++ + K +I D I +LH EV + I+K
Sbjct: 94 ELGVDVEYSDHGYKALTCLVQISTPD-KDYIIDA-----IALKDELHALNEVFTNPDIVK 147
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
+ H A D L + + + N++DTQ A AL +GL+ LL+ Y
Sbjct: 148 IFHSAVNDLKWLQQDLGVFVVNLFDTQIAMKALGYK------------KLGLDALLQDYH 195
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
++ + + + R++ ++ RPL YA D L+ +H++ E
Sbjct: 196 VAKD------KTMQRQD---FRRRPLPPKFKDYARVDSHYLIGFYHKLKNE 237
>gi|91088803|ref|XP_968984.1| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 377
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 40 KVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH---EVLESDRILK 96
++G+D+E D G LV ++ + K +I D I +LH EV + I+K
Sbjct: 94 ELGVDVEYSDHGYKALTCLVQISTPD-KDYIIDA-----IALKDELHALNEVFTNPDIVK 147
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
+ H A D L + + + N++DTQ A AL +GL+ LL+ Y
Sbjct: 148 IFHSAVNDLKWLQQDLGVFVVNLFDTQIAMKALGYK------------KLGLDALLQDYH 195
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
++ + + + R++ ++ RPL YA D L+ +H++ E
Sbjct: 196 VAKD------KTMQRQD---FRRRPLPPKFKDYARVDSHYLIGFYHKLKNE 237
>gi|398020902|ref|XP_003863614.1| hypothetical protein, unknown function [Leishmania donovani]
gi|322501847|emb|CBZ36929.1| hypothetical protein, unknown function [Leishmania donovani]
Length = 754
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-------LHEVLESDR 93
+ LDLEG LG G + +++LA + ++I DV +M + L VLES
Sbjct: 550 IALDLEGRSLGRMGSICIITLATYS-TVYIIDV-----VMLGAEALRSGSPLQRVLESRD 603
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ--CAFTALQLSDPRLLSQDLVPHTIGLNDL 151
I+K++ D L + +RL+NV D Q F S PH G+ +
Sbjct: 604 IMKLMFDCRADCDALFFLYCVRLQNVCDLQISSCFALFPTS----------PHLPGMKSV 653
Query: 152 ---LKFYKISPNNFKKNIQNLYRENPHI------WKTRPLTSDMLLYAAADVESLLA--- 199
L + K ++L+ NP W+ RPLT ++ Y A DV+ A
Sbjct: 654 FLALGLFTDEDTGIKNAGRHLF--NPRCGGSFDRWEERPLTDVLVQYCAVDVKYFFAAQL 711
Query: 200 -LFHRMTKEYALKQNRL 215
L+ + + L + RL
Sbjct: 712 ILWDHVEQGCRLGEARL 728
>gi|7595900|gb|AAF64490.1|AF241636_1 WRN protein [Mus musculus]
Length = 1401
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|47230240|emb|CAG10654.1| unnamed protein product [Tetraodon nigroviridis]
Length = 464
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 30 SAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+A+ I + +G+ G+ + G++ + +A + ++++FD+ + F + +L
Sbjct: 19 AAVIHIKQQCVIGVGAGGLKMSEHGRLCWLQIATKK-RVYLFDILLLGSMAFRNGISSIL 77
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
ES ILKV+H AG L+ F ++L NV+DTQ A
Sbjct: 78 ESKEILKVLHDCREIAGFLMGQFGVKLNNVFDTQVA 113
>gi|443729778|gb|ELU15581.1| hypothetical protein CAPTEDRAFT_220187 [Capitella teleta]
Length = 705
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 29 QSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEV 88
+ A+ ++ E+ + + EG+ +G +G ++ + +A + + +FD+ + F+ + +
Sbjct: 190 RDAVQSLAAENIISIAAEGIRIGRNGTLAWLQMATRQ-HVMLFDMKALGPRAFEEGIRYL 248
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL 148
LE ILK+IH G + L + IRL N++DTQ A ++ + + +T L
Sbjct: 249 LEEPTILKIIHDCRGLSDLLHHIYKIRLVNIFDTQVADAVIEFNKKGTWPE----YTNPL 304
Query: 149 ND-LLKFYKISPNN---FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL----LAL 200
N +L F + + F+K+ + Y + +W RPL L Y V L L L
Sbjct: 305 NKCILMFLDVDISEISIFRKHAET-YEADQSVWLRRPLPPPALDYLVKSVRCLRELRLVL 363
Query: 201 FHRM 204
RM
Sbjct: 364 MERM 367
>gi|2130973|dbj|BAA20269.1| WRN typeI [Mus musculus]
gi|2130975|dbj|BAA20270.1| WRN typeII [Mus musculus]
Length = 1401
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|398348927|ref|ZP_10533630.1| ribonuclease III [Leptospira broomii str. 5399]
Length = 389
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
++ +V+ Q A+ T+ + +D E KV L+ ++ GK +IFD P+
Sbjct: 9 VVDNVRSLQLALITLGQSDCISIDTESSGYYTYYSKVCLIQIS-SKGKNYIFD----PIR 63
Query: 80 MFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
+ D L + E+ ILK+ H A D L +F+ + N+ DT + L L LL
Sbjct: 64 LADVSGLGPLFENPAILKIFHSASDDIKALKRDFSFKFVNIADTMFSSRLLDLEQNSLLY 123
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
LV H ++K+ + +E W+ RPL L YAA D L
Sbjct: 124 --LVEH---------YHKVKLSK---------KEQKSNWEKRPLDKSQLQYAALDTVYLE 163
Query: 199 ALFHRMTKEYALKQNRLLLDNLIYE 223
+++ +M +E A R LL+ + E
Sbjct: 164 SIWEKMREELA---KRKLLEEALSE 185
>gi|148703462|gb|EDL35409.1| Werner syndrome homolog (human) [Mus musculus]
Length = 1385
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|146096632|ref|XP_001467873.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134072239|emb|CAM70942.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 754
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-------LHEVLESDR 93
+ LDLEG LG G + +++LA + ++I DV +M + L VLES
Sbjct: 550 IALDLEGRSLGRMGSICIITLATYS-TVYIIDV-----VMLGAEALRSGSPLQRVLESRD 603
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ--CAFTALQLSDPRLLSQDLVPHTIGLNDL 151
I+K++ D L + +RL+NV D Q F S PH G+ +
Sbjct: 604 IMKLMFDCRADCDALFFLYCVRLQNVCDLQISSCFALFPTS----------PHLPGMKSV 653
Query: 152 ---LKFYKISPNNFKKNIQNLYRENPHI------WKTRPLTSDMLLYAAADVESLLA--- 199
L + K ++L+ NP W+ RPLT ++ Y A DV+ A
Sbjct: 654 FLALGLFTDEDTGIKNAGRHLF--NPRCGGSFDRWEERPLTDVLVQYCAVDVKYFFAAQL 711
Query: 200 -LFHRMTKEYALKQNRL 215
L+ + + L + RL
Sbjct: 712 ILWDHVEQGCRLGEARL 728
>gi|148909381|gb|ABR17789.1| unknown [Picea sitchensis]
Length = 175
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL G++ ++ LA ++ + V L+M K LES + KV+H
Sbjct: 37 IGFDCEGVDLARYGRLCIMQLAFEDAVYLVDAVEGGHLLMQACK--PALESVYVTKVVHD 94
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L + I+L NV DTQ A+ ++ + R + D +GL ++ +S
Sbjct: 95 CKRDSEALYFQYGIKLNNVVDTQIAYPLIEEQEGRKWAPDEYISFVGLLADPRYCGVSYA 154
Query: 161 NFKKNIQNLYRE 172
K+ ++ L RE
Sbjct: 155 E-KEEVRTLLRE 165
>gi|195501501|ref|XP_002097822.1| GE26425 [Drosophila yakuba]
gi|194183923|gb|EDW97534.1| GE26425 [Drosophila yakuba]
Length = 900
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 30/207 (14%)
Query: 4 KCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVS 60
+ Q Q +L LM T L + V++ + A+ + ++ +D+E G LV
Sbjct: 254 QLQKQKPVLPALMANTELMVVDTVEKLEQALEELRQAPQIAIDVEHHSYRTFMGITCLVQ 313
Query: 61 LALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKN 118
++ ++ K +IFD LI+ D L+ VL + LK++HGA D L + ++ + N
Sbjct: 314 MSTRS-KDYIFDT----LILRDEMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVN 368
Query: 119 VYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWK 178
++DT A AL L+ RL L+ H + L D+ K +++ W+
Sbjct: 369 MFDTHRAAKALNLA--RLSLAYLLKHYLDL-DVDKSLQLA-----------------DWR 408
Query: 179 TRPLTSDMLLYAAADVESLLALFHRMT 205
RPL ++ YA D L+ ++ RMT
Sbjct: 409 MRPLPQQLVDYARQDTHFLIYVYERMT 435
>gi|146099475|ref|XP_001468653.1| exosome subunit rrp6p homologue, putative [Leishmania infantum
JPCM5]
gi|134073021|emb|CAM71740.1| exosome subunit rrp6p homologue, putative [Leishmania infantum
JPCM5]
Length = 743
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
Q+ +A +L S++ +DLE D G L+ ++ + + FI D M G L
Sbjct: 243 QAMIAKLLLASEIAVDLEHHDFYSYQGFTCLMQISTRE-EDFIVDCLKLRSSM--GALAP 299
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V + ILKV+HGA D L +F++ + N +DT A L + PH++
Sbjct: 300 VFLNPSILKVLHGAREDIRWLQKDFSLYVVNFFDTGVALQTLHM-----------PHSLA 348
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ F ++ N + W+ RPL+++M+ YA D LL ++ R+
Sbjct: 349 FA-VDHFCQVKLNKKYQTAD---------WRVRPLSAEMVHYARQDTHFLLYVYDRL 395
>gi|449304144|gb|EMD00152.1| hypothetical protein BAUCODRAFT_366269 [Baudoinia compniacensis
UAMH 10762]
Length = 774
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 38/198 (19%)
Query: 19 TNLITDVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVY-- 74
T D ++A M L ++K + +DLE DL G V L+ ++ +N K +I D
Sbjct: 206 TATFVDTEDAMYEMLEELKQAKEIAVDLEHHDLRSYVGIVCLMQISTRN-KDWIVDTLKP 264
Query: 75 -----SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
SC L+EV + ILKV+HGA+ D L + + L ++DT A AL
Sbjct: 265 WRRKLSC--------LNEVFANPSILKVLHGAYMDVIWLQRDLGLYLVGLFDTHYACRAL 316
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
+ L LLK K + + +K Q W+ RPL ++L Y
Sbjct: 317 GYA------------GASLAFLLK--KFANVDAQKQYQTA------DWRIRPLPQELLDY 356
Query: 190 AAADVESLLALFHRMTKE 207
A +D LL +F M E
Sbjct: 357 ARSDTHYLLYIFDNMRNE 374
>gi|398022862|ref|XP_003864593.1| unnamed protein product [Leishmania donovani]
gi|322502828|emb|CBZ37911.1| unnamed protein product [Leishmania donovani]
Length = 743
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
Q+ +A +L S++ +DLE D G L+ ++ + + FI D M G L
Sbjct: 243 QAMIAKLLLASEIAVDLEHHDFYSYQGFTCLMQISTRE-EDFIVDCLKLRSSM--GALAP 299
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V + ILKV+HGA D L +F++ + N +DT A L + PH++
Sbjct: 300 VFLNPSILKVLHGAREDIRWLQKDFSLYVVNFFDTGVALQTLHM-----------PHSLA 348
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ F ++ N + W+ RPL+++M+ YA D LL ++ R+
Sbjct: 349 FA-VDHFCQVKLNKKYQTAD---------WRVRPLSAEMVHYARQDTHFLLYVYDRL 395
>gi|161078302|ref|NP_001097795.1| Rrp6 [Drosophila melanogaster]
gi|158030263|gb|AAF55107.3| Rrp6 [Drosophila melanogaster]
Length = 900
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 2 EAKCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSL 58
E + Q Q +L LM T L + V++ + A+ + ++ +D+E G L
Sbjct: 252 EEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCL 311
Query: 59 VSLALQNGKIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRL 116
V ++ ++ K +IFD LI+ D L+ VL + LK++HGA D L + ++ +
Sbjct: 312 VQMSTRS-KDYIFDT----LILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYI 366
Query: 117 KNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI 176
N++DT A AL ++ RL L+ H + L D+ K +++
Sbjct: 367 VNMFDTHRAAKALNMA--RLSLAYLLKHYLDL-DVDKSLQLA-----------------D 406
Query: 177 WKTRPLTSDMLLYAAADVESLLALFHRMT 205
W+ RPL ++ YA D L+ ++ RMT
Sbjct: 407 WRMRPLPQQLVDYARQDTHFLIYVYGRMT 435
>gi|351715433|gb|EHB18352.1| Werner syndrome ATP-dependent helicase [Heterocephalus glaber]
Length = 1411
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
+G D+E + GK V+LV L + K ++F + S + +F L +LE++ I K
Sbjct: 79 IGFDMEWPPIYNKGKLSRVALVQLCVSESKCYLFHISS--MSVFPQGLKMLLENETIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LK+ + T A L+ + L+ LV H G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKSFVELTDVANQKLKCMEIWSLN-GLVKHLFG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PL+ D LYAA D + L ++ ++
Sbjct: 195 IRCSN---------------WSIFPLSEDQKLYAATDAYAGLIIYQKL 227
>gi|332250403|ref|XP_003274341.1| PREDICTED: exosome component 10 [Nomascus leucogenys]
Length = 912
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R++ +LI+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRSIEETPCHLISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|403368461|gb|EJY84065.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 547
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK--L 85
Q + ++ S +G+DLE G + L+ + + + ++ D C + + K L
Sbjct: 92 QEILRSLYKYSVLGVDLENHQTKSYHGFLCLIQITTPDYQTYLID---CLKLREEIKTYL 148
Query: 86 HEVLESDRILKVIHGAF-GDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
+ ES LK+ HG D L +F NV+DTQ ++ L R+ L
Sbjct: 149 GAIFESHTTLKIFHGCVNSDITWLQRDFGFATVNVFDTQESYKKL-FKGQRVSLLHLW-- 205
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
T D +K K N F+K W RPL+S+ML YAA D L+ + R+
Sbjct: 206 TTYCKDRVKISKEQKNMFQKAD----------WSMRPLSSEMLNYAAHDSHYLIYIAKRL 255
Query: 205 TKEYALKQNRL 215
K + QN+L
Sbjct: 256 QKNFE-NQNQL 265
>gi|402874068|ref|XP_003900868.1| PREDICTED: exonuclease 3'-5' domain-containing protein 1-like,
partial [Papio anubis]
Length = 288
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVA-TNCRVYLFDIFLLGSRAFNNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISP 159
I L+K K++P
Sbjct: 259 ITTLQESLIKHLKVAP 274
>gi|407261615|ref|XP_003946318.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Mus
musculus]
Length = 1434
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 140 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 197
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 198 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 255
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 256 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 288
>gi|255730563|ref|XP_002550206.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132163|gb|EER31721.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 786
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 24 DVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMF 81
D EA + M L +S+ + +DLE D G V L+ ++ ++ + +I D L +
Sbjct: 236 DTVEALNKMIEELKKSEEIAVDLEHHDFRTYYGIVCLMQISNRD-QDWIIDT----LALR 290
Query: 82 DG--KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
D +L+EV + I+KV HGAF D L + + + +++DT A AL LS
Sbjct: 291 DELTELNEVFTNPNIVKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASRALGLS------- 343
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
L LL+ Y + K + + W+ RPL+S ML YA +D LL
Sbjct: 344 -----RFSLAYLLEHYAQFKTSKKYQLAD--------WRIRPLSSPMLAYARSDTHFLLY 390
Query: 200 LFHRM 204
++ ++
Sbjct: 391 IYDQL 395
>gi|226509164|ref|NP_001149869.1| PUR ALPHA-1 [Zea mays]
gi|194697892|gb|ACF83030.1| unknown [Zea mays]
gi|195635165|gb|ACG37051.1| PUR ALPHA-1 [Zea mays]
gi|413946996|gb|AFW79645.1| PUR ALPHA-1 [Zea mays]
Length = 306
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 70/238 (29%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + + V D +
Sbjct: 33 VELV-SKTLQFEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPIDGVAWFLDLFDYY 90
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ D + S+ L T+ ++ D+ +N R RF+ +S+ ++P
Sbjct: 91 IRT----------DERDVFSKELRLQTKVFYFDIGENKRGRFLKVSEASVNRNRSTIIVP 140
Query: 416 VG--GKLSSIAF--------------------P-AQDLGP---IIGLISDL--------- 440
G G+ AF P Q + P + GL D+
Sbjct: 141 AGSSGEEGWEAFRNVLLEINNEASRLYVLPNHPNQQHMEPPERLPGLSDDVGAGFIAGHG 200
Query: 441 QQEHSCPEDE-----DGAPE--------GNYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
Q S PE + D P+ +R + KRFFF++ N +G ++RISE++
Sbjct: 201 SQSASGPEVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEVA 258
>gi|428671950|gb|EKX72865.1| 3'-5' exonuclease domain containing protein [Babesia equi]
Length = 742
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGM-DLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ DV+ + +AT+ E + +D+E + G V LV + + + +I D P
Sbjct: 323 LVDDVKGLKKMIATLKKEKIIAVDVEHHSEETFRGFVCLVQFS-SSKEDWIVD----PFK 377
Query: 80 MFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLL 137
+F L+EV+ ILKV HG+ D L +F + + N++DT+ A L++ R L
Sbjct: 378 IFGSMNLLNEVMTDPEILKVFHGSDNDIIWLQRDFGVYVVNMFDTKAAAEVLKVPGKRSL 437
Query: 138 SQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
L+ + G+ + K Y+ + W+ RPL +ML YA D L
Sbjct: 438 DY-LLMNLCGVR-IDKSYQTAD-----------------WRKRPLPPEMLKYACGDTHYL 478
Query: 198 LALF 201
+ L+
Sbjct: 479 IKLY 482
>gi|74142907|dbj|BAE42489.1| unnamed protein product [Mus musculus]
Length = 862
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|427403582|ref|ZP_18894464.1| hypothetical protein HMPREF9710_04060 [Massilia timonae CCUG 45783]
gi|425717565|gb|EKU80521.1| hypothetical protein HMPREF9710_04060 [Massilia timonae CCUG 45783]
Length = 205
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 21/192 (10%)
Query: 16 MNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVS----LVSLALQNGKIFIF 71
+ R L+ Q+A+ A+A +L +G D E G+VS LV LA +
Sbjct: 24 LARVRLVRSEQDAREALADLLASDAIGFDTESKPTFAKGEVSTGPHLVQLATLDTAWLFQ 83
Query: 72 DVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
+ + L VLE +R+LKV G D L S F I L+NV D TAL+
Sbjct: 84 TATPAGMALAVTVLKPVLEDERVLKVGFGLGDDVKRLKSKFGIGLRNVLDLS---TALRR 140
Query: 132 SDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAA 191
R + +G ++ + F + +Q R W L+ L YAA
Sbjct: 141 RGER--------NPLGARSAVERF------FGQRLQKSKRITTTNWALPRLSDKQLQYAA 186
Query: 192 ADVESLLALFHR 203
D + L ++ +
Sbjct: 187 DDAHAALKIYRQ 198
>gi|308810304|ref|XP_003082461.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
gi|116060929|emb|CAL57407.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
Length = 701
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 21 LITDVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPL 78
++ D ++A +AT L + K +DLE G L+ ++ + K F+ DV +
Sbjct: 120 VVVDTEDALEELATHLEQCKEFAVDLEHHSYRSFKGFTCLMQVSTRE-KDFVVDVLALRS 178
Query: 79 IMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
++ D L + LKV+HGA D L +F I + ++DT A L+L L
Sbjct: 179 LVRDA-LGKAFADPNTLKVMHGADNDVQWLQKDFGIFVSCLFDTGQAARVLELPSKALAY 237
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
L+ H G+ KF W+ RPLT +ML YA D LL
Sbjct: 238 --LLQHYCGIKANKKFQLAD------------------WRVRPLTREMLDYARGDTHYLL 277
Query: 199 ALFHRMTKEYALK 211
++ + K A +
Sbjct: 278 YVYDELKKALAAR 290
>gi|74227079|dbj|BAE38334.1| unnamed protein product [Mus musculus]
Length = 789
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|352962154|ref|NP_001084849.2| exonuclease 3'-5' domain-containing protein 1 [Xenopus laevis]
Length = 483
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A+ + N+ + + G ++ GK+S + A ++ ++++FDV +F L VLE
Sbjct: 152 AIRHLQNQKVISIGAVGQNICRHGKLSWLQFATRS-RVYLFDVLVLGSKVFKNGLQMVLE 210
Query: 91 SDRILKVIHGA--FGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD---LVPH- 144
ILKVIH GD L + I L NV+DT Q+ D L S + +PH
Sbjct: 211 DKGILKVIHDCRWLGDI--LSHQYGIILNNVFDT-------QVGDVYLFSMETGGFLPHG 261
Query: 145 TIGLND-LLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
T L + L+ + P+ +F + Q L +E IW RP+ +L + +V L+ L
Sbjct: 262 TRTLEECLIHHLSMLPSKVSFLAHRQTLTKEYHDIWFDRPMDPTLLKLLSLEVTYLMPL 320
>gi|322705302|gb|EFY96889.1| 3'-5' exonuclease [Metarhizium anisopliae ARSEF 23]
Length = 281
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 31/194 (15%)
Query: 37 NESKVGLDLEGMDLGVDGKVSLVSLALQ-NGKIFIFDVYSCPLIMFDG------KLHEVL 89
N + +DLEG+ LG G VSL+S+ + K +I D++ F L +L
Sbjct: 32 NPPSLFVDLEGIKLGRSGSVSLLSVHVAPTAKTYIIDIFKLGEEAFTATSTSGISLKNIL 91
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP-RLLSQDLVPHTIGL 148
ES+ I KV D+ L S++ IR+ + D Q A + P R ++ GL
Sbjct: 92 ESENIPKVFFDIRNDSNALFSHYGIRVGGIRDLQVMEFATRRGPPARFIT--------GL 143
Query: 149 NDLLKF-------YKISPNNFKKNIQNLYRENP----HIWKTRPLTSDMLLYAAADVESL 197
+ +K+ K S K LY N ++ RPL ++ Y+A DV
Sbjct: 144 ANCIKYDCPMTESQKQSWLQMKDRAGRLYDPNKGGGYEVFNERPLRREICEYSAQDV--- 200
Query: 198 LALFHRMTKEYALK 211
AL ++ + Y+ K
Sbjct: 201 -ALLPKLWEAYSTK 213
>gi|6018181|gb|AAF01781.1| P100 polymyositis-scleroderma overlap syndrome associated
autoantigen homolog [Mus musculus]
Length = 831
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|241948847|ref|XP_002417146.1| exosome component 3'-5' exonuclease [Candida dubliniensis CD36]
gi|223640484|emb|CAX44736.1| exosome complex exonuclease RRP6, putative [Candida dubliniensis
CD36]
Length = 776
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 25 VQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
V+E + + +++ +DLE D G V L+ ++ + + +I D L++ D
Sbjct: 235 VEELHKMVPELKKSTEIAVDLEHHDYRSYYGIVCLMQISSRE-QDWIVDT----LVLRDD 289
Query: 84 --KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
L+EV I+KV HGAF D L + + + +++DT A AL PR
Sbjct: 290 LTVLNEVFADPNIVKVFHGAFMDIIWLQRDLGLYVVSLFDTYHASRALGF--PRF----- 342
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y +FK + Q + W+ RPL+ ML YA +D LL ++
Sbjct: 343 -----SLAYLLEVYA----HFKTSKQYQLAD----WRIRPLSPPMLAYARSDTHFLLFIY 389
Query: 202 HRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRR 238
++ +N+L+ N + + L++ + KRR
Sbjct: 390 DQL-------KNKLIDANKLAQVLYDS---RQVAKRR 416
>gi|20381286|gb|AAH27840.1| Exosc10 protein [Mus musculus]
Length = 862
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|353243741|emb|CCA75245.1| related to nucleolar 100K polymyositis-scleroderma protein
[Piriformospora indica DSM 11827]
Length = 847
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HGA D L NF++ + N++DT A AL+L PR H
Sbjct: 304 LNEVFTDPNIVKVLHGAESDIVWLQENFHLYIVNLFDTFHASRALEL--PR--------H 353
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL Y +F + + + W+ RPL ++ML YA +D LL ++ ++
Sbjct: 354 SLAF--LLSAY----CDFTADKRYQLAD----WRIRPLPAEMLHYARSDTHFLLFIYDQL 403
>gi|426256366|ref|XP_004021811.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Ovis aries]
Length = 1446
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G G+V+L+ L + K ++F + S +++F L +LE++ I K
Sbjct: 77 VGFDIEWPPVYKKGTLGRVALIQLCVSESKCYLFHISS--MLVFPQGLKMLLENEAIKKA 134
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G D LL +F+++LK++ + T A L+ + T LN L+K+
Sbjct: 135 GVGIEQDQWKLLRDFDVKLKSIVELTDVANEKLKCIE-----------TWSLNGLVKYL- 182
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
F K + W PLT D +YAA D + ++ ++
Sbjct: 183 -----FGKQLLKDRSVRCSNWSKFPLTEDQKVYAATDAYAGFIIYQKLA 226
>gi|312385767|gb|EFR30186.1| hypothetical protein AND_00361 [Anopheles darlingi]
Length = 526
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 20/142 (14%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV R LKV+HGA D L + + L N++DT A LQ S
Sbjct: 273 LNEVFTDPRKLKVLHGAISDIEWLQRDLGLYLVNMFDTGEAARVLQFS------------ 320
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
IGL LLK Y NI+ W+ RPL + YA D LL ++ R+
Sbjct: 321 RIGLQFLLKHY--------CNIETDKAYQLADWRMRPLPPAFIEYARKDTHYLLYIYDRI 372
Query: 205 TKEYALKQNRLLLDNLIYETLF 226
+ K LL + ++ F
Sbjct: 373 RNDLLEKGGDSLLQTVYDKSTF 394
>gi|20071218|gb|AAH27326.1| Exosome component 10 [Mus musculus]
Length = 887
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|148682876|gb|EDL14823.1| exosome component 10, isoform CRA_b [Mus musculus]
Length = 864
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 354 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 403
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 404 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 453
Query: 205 TKE 207
E
Sbjct: 454 RLE 456
>gi|148227808|ref|NP_001081838.1| Werner syndrome ATP-dependent helicase homolog [Xenopus laevis]
gi|29428101|sp|O93530.1|WRN_XENLA RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN; AltName:
Full=Focus-forming activity 1; Short=FFA-1
gi|3420291|gb|AAC63512.1| focus forming activity 1 [Xenopus laevis]
Length = 1436
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 33 ATILNESKVGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+++L E +G D+E + G GKV+L+ + + K ++F + P+ F L +L
Sbjct: 65 SSLLEEDVLGFDIEWPPVYTKGKTGKVALIQVCVSEKKCYLFHI--SPMAGFPKGLKRLL 122
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL-VPHTIGL 148
E + + KV G GD L+S++ ++LK ++LS+ + +Q L
Sbjct: 123 EDESVRKVGVGIEGDQWKLMSDYELKLKGF---------IELSE--MANQKLRCKEKWTF 171
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHI---WKTRPLTSDMLLYAAADVESLLALFHRM 204
N L+K FK + LY+ + W LT D LYAA D + L ++ ++
Sbjct: 172 NGLIKHL------FK---EQLYKRKSYRCSNWDIFLLTEDQKLYAATDAYAGLLIYKKL 221
>gi|227116266|ref|NP_057908.2| exosome component 10 [Mus musculus]
gi|341940669|sp|P56960.2|EXOSX_MOUSE RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2 homolog; AltName: Full=Polymyositis/scleroderma
autoantigen 2 homolog
Length = 887
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|109504268|ref|XP_001059940.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform 1
[Rattus norvegicus]
gi|392354016|ref|XP_002728460.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Rattus
norvegicus]
Length = 1400
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKQGKRSRVAVIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKSIRKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANRKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PL+ D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSDFPLSEDQKLYAATDAYAGLIIYQKL 221
>gi|6018165|gb|AAF01779.1|AF091392_1 P100 polymyositis-scleroderma overlap syndrome associated
autoantigen homolog [Mus musculus]
gi|74184429|dbj|BAE25741.1| unnamed protein product [Mus musculus]
gi|148682877|gb|EDL14824.1| exosome component 10, isoform CRA_c [Mus musculus]
Length = 887
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|348578015|ref|XP_003474779.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Cavia
porcellus]
Length = 1486
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
+G D+E GK V+L+ L + K ++F + S + +F L +LE++ I K
Sbjct: 79 IGFDMEWPPTYSKGKLSRVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENEAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LK+ + T A L+ ++ L+ LV H G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKSFVELTDVANQKLKSTEIWSLN-GLVKHLFG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ +N W PL+ D LYAA D + L ++ ++
Sbjct: 195 VRCSN---------------WSNFPLSEDQKLYAATDAYAGLIIYQKL 227
>gi|157874025|ref|XP_001685508.1| hypothetical protein LMJF_32_1880 [Leishmania major strain
Friedlin]
gi|68128580|emb|CAJ08712.1| hypothetical protein LMJF_32_1880 [Leishmania major strain
Friedlin]
Length = 753
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDV--YSCPLIMFDGKLHEVLESDRILKVI 98
+ LDLEG LG G + +++LA + ++I DV + L VLES I+K++
Sbjct: 549 IALDLEGRSLGRMGSICIITLATYS-TVYIIDVVMLGAEALYAGSPLKRVLESRDIMKLM 607
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQ--CAFTALQLSDPRLLSQDLVPHTIGLND---LLK 153
D L + +RL+NV D Q F S PH G+ +L
Sbjct: 608 FDCRADCDALFFLYGVRLQNVCDLQISSCFALFPTS----------PHLPGMKSVFLVLG 657
Query: 154 FYKISPNNFKKNIQNLYRENPHI------WKTRPLTSDMLLYAAADVESLLA 199
+ K ++L+ NP W+ RPLT ++ Y A DV+ A
Sbjct: 658 LFTDEDAGIKNAGRHLF--NPRCGGSFDWWEERPLTDVLVQYCAVDVKYFFA 707
>gi|118372761|ref|XP_001019575.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89301342|gb|EAR99330.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 881
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 39 SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
S+V +DLE +G L+ ++ + K +I DV+S + KL+ V I+KV
Sbjct: 264 SEVAIDLEHHSYRSFNGITCLMQISSRT-KDYIVDVFSVWKSL--HKLNAVTTDKNIVKV 320
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
+HGA D L +F I + N++DT A A LS P + L LL+
Sbjct: 321 LHGADMDIQWLQRDFGIYIVNLFDTGQA--ARTLSMP----------SYALAYLLQSISK 368
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
P + K + + W+ RPL +M+ YA +D LL+++ +
Sbjct: 369 VPTDKKYQLAD--------WRIRPLPREMISYARSDTHYLLSIYDNL 407
>gi|224003495|ref|XP_002291419.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973195|gb|EED91526.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 33/193 (17%)
Query: 26 QEAQSAMATILNESK-------VGLDLEGMD-LGVDGKVSLVSLALQ--NGKIFIFDVYS 75
++ + +AT +N+ + + LDLE G V L+ L++ +G F+ D S
Sbjct: 9 EDEMTELATRINDGEQSGEIREIALDLEAHSHRTFAGFVCLIQLSIHISSGYDFLIDALS 68
Query: 76 CPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
++ L +L + ILKV+HGA D L +F + N++DT A AL+
Sbjct: 69 LRHVI-PTCLGPILANPNILKVMHGADSDIPWLQRDFGCYVVNLFDTGRASRALKF---- 123
Query: 136 LLSQDLVPHTIGLNDLLKFYK-ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
+ GL LL+ Y + P+ + W+ RPL DM YA AD
Sbjct: 124 --------QSAGLAFLLRKYAGLDPDKAHQLSD---------WRRRPLPDDMRTYAVADT 166
Query: 195 ESLLALFHRMTKE 207
LL ++ ++ E
Sbjct: 167 RYLLDIYDKLRLE 179
>gi|389740502|gb|EIM81693.1| hypothetical protein STEHIDRAFT_171972 [Stereum hirsutum FP-91666
SS1]
Length = 910
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +I+K+ HGA D L +FN+ + N++DT A L PR H
Sbjct: 304 LNEVFTDPKIVKIFHGAESDVAWLQQDFNLYIVNLFDTFHASKVLDF--PR--------H 353
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
GL LL+ Y +F + + + W+ RPL +ML YA +D LL ++
Sbjct: 354 --GLASLLEMY----CDFTADKRYQLAD----WRVRPLPQEMLEYARSDTHFLLYIY 400
>gi|3851581|gb|AAC72359.1| Wrn protein [Mus musculus]
Length = 988
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|301620462|ref|XP_002939597.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 1-like [Xenopus (Silurana) tropicalis]
Length = 490
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A+ + N+ + + G ++ GK+S + A ++ ++++FDV +F L VLE
Sbjct: 152 AIHHLQNQKVISIGAVGQNICRHGKLSWLQFATKS-RVYLFDVLVLGSKVFKNGLQMVLE 210
Query: 91 SDRILKVIHGA--FGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD---LVPHT 145
ILKVIH GD L + I L NV+DT Q+ D L S + +PH
Sbjct: 211 DTGILKVIHDCRWLGDI--LSYQYGIILNNVFDT-------QVGDVYLFSMETGGFLPHR 261
Query: 146 IGLNDLLKFYKIS--PN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I + + +S P+ +F + Q L E IW RP+ +L + +V LL L
Sbjct: 262 IRTLEECLIHHLSMLPSRVSFLAHKQPLTEEYDDIWFDRPMDPTLLKLLSLEVIHLLPL 320
>gi|148682875|gb|EDL14822.1| exosome component 10, isoform CRA_a [Mus musculus]
Length = 916
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 355 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 404
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 405 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 454
Query: 205 TKE 207
E
Sbjct: 455 RLE 457
>gi|418749157|ref|ZP_13305449.1| 3'-5' exonuclease [Leptospira licerasiae str. MMD4847]
gi|418757399|ref|ZP_13313587.1| 3'-5' exonuclease domain / HRDC domain multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384117070|gb|EIE03327.1| 3'-5' exonuclease domain / HRDC domain multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404276226|gb|EJZ43540.1| 3'-5' exonuclease [Leptospira licerasiae str. MMD4847]
Length = 389
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
++ +V+ Q A+ T+ + +D E KV L+ ++ GK +IFD P+
Sbjct: 9 VVDNVRSLQLALITLSQSDCLSIDTESSGYYTYYSKVCLIQIS-SKGKNYIFD----PIR 63
Query: 80 MFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
+ D L + E+ ILK+ H A D L +F + N+ DT + L L LL
Sbjct: 64 LDDLNGLGPLFENPNILKIFHSASDDIKALKRDFGFKFINIADTMFSSRLLDLEQNSLLY 123
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
LV H ++K+ + +E W+ RPL L YAA D L
Sbjct: 124 --LVEH---------YHKVKLSK---------KEQKSNWEKRPLEKSQLQYAALDTVYLE 163
Query: 199 ALFHRMTKEYALKQNRLLLDNLIYE 223
+++ +M +E R LLD + E
Sbjct: 164 SIWTKMGEELG---KRKLLDEAVSE 185
>gi|226497542|ref|NP_001141920.1| uncharacterized protein LOC100274069 [Zea mays]
gi|194706458|gb|ACF87313.1| unknown [Zea mays]
gi|414876890|tpg|DAA54021.1| TPA: hypothetical protein ZEAMMB73_358058 [Zea mays]
Length = 308
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 70/242 (28%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + + V D +
Sbjct: 35 VELV-SKTLQFEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPVDGVAWFLDLFDYY 92
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLP 415
+ + RD S+ L T+ ++ D+ +N R RF+ +S+ ++P
Sbjct: 93 IRTDE-------RDAF---SKELRLQTKVFYFDIGENKRGRFLKVSEASVNRNRSTIIVP 142
Query: 416 VG--GKLSSIAFPA---------------------QDLGP---IIGLISDL--------- 440
G G+ AF + Q + P + GL D+
Sbjct: 143 AGSSGEEGWEAFRSVLLEINNEATRLYVLPNHPNQQHMEPPERLPGLSDDVGAGFIAGHG 202
Query: 441 QQEHSCPEDE-----DGAPE--------GNYMRCNNKRFFFNVSKNGKGTFMRISEISTP 487
Q S PE + D P+ +R + KRFFF++ N +G ++RISE++
Sbjct: 203 SQSASGPEVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEVAGA 262
Query: 488 SK 489
+
Sbjct: 263 DR 264
>gi|12856957|dbj|BAB30844.1| unnamed protein product [Mus musculus]
Length = 705
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 329 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 378
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 379 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 428
Query: 205 TKE 207
E
Sbjct: 429 RLE 431
>gi|170095531|ref|XP_001878986.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646290|gb|EDR10536.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 250
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKI-FIFDVYSCPLIMFD-----GK-LHEVLESDR 93
+ +DLEG+DL GK+SLV + ++ ++ DV + FD G+ L +LE
Sbjct: 35 LAVDLEGIDLCRHGKISLVQIMSSVSEVVWLVDVTTLGSQAFDHVDPYGRTLRMILEDTG 94
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS---DPRLLSQDLVPHTIGLND 150
I KV + DA L + + + L VYD Q A++ S RLL+ GL+
Sbjct: 95 IKKVFYDVRNDADALYNLYGVNLMGVYDLQLLELAVRHSLRRQTRLLN--------GLSK 146
Query: 151 LLKFYKISPNNF---KKNIQNLYRE----NPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
+K Y P + K+ L++ + +++ RPL ++ Y A DV L AL
Sbjct: 147 SIKSYLTPPVEWEPVKEAGSRLFKPEFGGSYSVFEERPLDPRIVAYCAQDVTLLFALEET 206
Query: 204 MTKEYA 209
+ + +
Sbjct: 207 LRRSFG 212
>gi|410081706|ref|XP_003958432.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
gi|372465020|emb|CCF59297.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
Length = 735
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV ++KV+HGAF D L + + + +++DT A AL PR H
Sbjct: 277 LNEVFTDPSVVKVLHGAFMDIIWLQRDLGLYIVSLFDTFHASRALGF--PR--------H 326
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++ ++
Sbjct: 327 SLAY--LLEEFA----NFKTSKKYQLAD----WRVRPLSKAMTAYARADTHFLLNIYDQL 376
Query: 205 TKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYIEE 264
+NRL+ N + L N+ KRR F ++ R + P P +
Sbjct: 377 -------RNRLVETNKLVGVLNES---RNVAKRR-FEYSKFR--------PRVPSPNVYS 417
Query: 265 VNSNEYIWRN---DYNVPLANAKLL 286
E WR YN+P LL
Sbjct: 418 ALEKEDPWRTLMFQYNIPSEREDLL 442
>gi|307102324|gb|EFN50630.1| hypothetical protein CHLNCDRAFT_59476 [Chlorella variabilis]
Length = 680
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L VL + RI KVIHG DA L +F + L NV+DT+ A Q L H
Sbjct: 180 LAPVLSNPRICKVIHGGGNDAVWLQRDFGLFLVNVFDTEKA------------CQVLGYH 227
Query: 145 TIGLNDLL-KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
L LL +F I + + W+ RPL+++++ YA DV+ LL + R
Sbjct: 228 QRSLGALLQRFCGIQADKSLGQRAD--------WRRRPLSAELIDYARRDVQHLLTIADR 279
Query: 204 MTKEYALKQNRL 215
+ E +Q L
Sbjct: 280 LGHELLAEQGLL 291
>gi|74187922|dbj|BAE37100.1| unnamed protein product [Mus musculus]
Length = 497
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQA--------ARLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|421099052|ref|ZP_15559712.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200901122]
gi|410797786|gb|EKR99885.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200901122]
Length = 388
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLDG-LGNLFEDKKILKIFHSAIDDIKALKKD 96
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQN 168
F + +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 97 FGFKFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN--- 141
Query: 169 LYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 --------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|398332245|ref|ZP_10516950.1| ribonuclease III [Leptospira alexanderi serovar Manhao 3 str. L 60]
gi|456860990|gb|EMF79700.1| 3'-5' exonuclease [Leptospira weilii serovar Topaz str. LT2116]
Length = 388
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLDG-LGNLFEDKKILKIFHSAIDDIKALKKD 96
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQN 168
F + +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 97 FGFKFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN--- 141
Query: 169 LYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 --------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|359729247|ref|ZP_09267943.1| ribonuclease D [Leptospira weilii str. 2006001855]
gi|417777730|ref|ZP_12425544.1| 3'-5' exonuclease [Leptospira weilii str. 2006001853]
gi|410782027|gb|EKR66592.1| 3'-5' exonuclease [Leptospira weilii str. 2006001853]
Length = 388
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLDG-LGNLFEDKKILKIFHSAIDDIKALKKD 96
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQN 168
F + +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 97 FGFKFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN--- 141
Query: 169 LYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 --------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|82237110|sp|Q6NRD5.1|EXD1_XENLA RecName: Full=Exonuclease 3'-5' domain-containing protein 1;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 1
gi|47124003|gb|AAH70821.1| Exdl1 protein [Xenopus laevis]
Length = 444
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
A+ + N+ + + G ++ GK+S + A ++ ++++FDV +F L VLE
Sbjct: 113 AIRHLQNQKVISIGAVGQNICRHGKLSWLQFATRS-RVYLFDVLVLGSKVFKNGLQMVLE 171
Query: 91 SDRILKVIHGA--FGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD---LVPH- 144
ILKVIH GD L + I L NV+DT Q+ D L S + +PH
Sbjct: 172 DKGILKVIHDCRWLGDI--LSHQYGIILNNVFDT-------QVGDVYLFSMETGGFLPHG 222
Query: 145 TIGLND-LLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
T L + L+ + P+ +F + Q L +E IW RP+ +L + +V L+ L
Sbjct: 223 TRTLEECLIHHLSMLPSKVSFLAHRQTLTKEYHDIWFDRPMDPTLLKLLSLEVTYLMPL 281
>gi|149057893|gb|EDM09136.1| rCG43045, isoform CRA_b [Rattus norvegicus]
Length = 1335
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKQGKRSRVAVIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKSIRKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANRKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PL+ D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSDFPLSEDQKLYAATDAYAGLIIYQKL 221
>gi|126030364|pdb|2E6L|A Chain A, Structure Of Mouse Wrn Exonuclease Domain
gi|126030365|pdb|2E6M|A Chain A, Structure Of Mouse Werner Exonuclease Domain
Length = 208
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G +V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 43 VGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISS--MSVFPQGLKMLLENKSIKKA 100
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 101 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 158
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 159 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 191
>gi|83273487|ref|XP_729420.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23487175|gb|EAA20985.1| POM1 [Plasmodium yoelii yoelii]
Length = 1813
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 6 QPQNNLLRTLMNRTNLITDVQEAQSAMATILNESK-VGLDLEGMDLGVDG-KVSLVSLAL 63
+P+ N + R +I D + + I N K GLD+E L V G K+ L+ +A+
Sbjct: 1229 EPEKNFNDNIETRFFIIND-KNYNEKINYIYNGIKYCGLDMETTGLEVFGEKIRLIQIAV 1287
Query: 64 QNGKIFIFDVYSCPLI-MFDGKLHEVLESDRILKVIH-GAFGDAGGLLSNFNIRLKNVYD 121
+N + I+D+++ + DG L ++L + I+K+I G F L +NFNI N++D
Sbjct: 1288 ENYPVIIYDMFNITNNNILDG-LRKILNDENIVKIIQNGKFDTKFLLYNNFNIT--NIFD 1344
Query: 122 TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRP 181
T A +LL ++ + LN++++ Y K QN +W
Sbjct: 1345 TYIA--------SKLLDKNKNMYGFKLNNIVEKYLSVY--LDKQQQN------SVWNNSL 1388
Query: 182 LTSDMLLYAAADVESLLALFHRMTKE 207
L ++ L YAA D LL L+ +++++
Sbjct: 1389 LNNNQLFYAARDSSCLLKLYKKLSEQ 1414
>gi|189194651|ref|XP_001933664.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979228|gb|EDU45854.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 786
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 38/198 (19%)
Query: 19 TNLITDVQEAQSAMATILNESK-VGLDLEGMD-LGVDGKVSLVSLALQNGKIFIFDVY-- 74
T + D EA +AM L +K + +DLE D G V L+ ++ ++ K +I D
Sbjct: 204 TATLVDTPEALAAMLAELKTAKEIAIDLEHHDNRTYIGMVCLMQISTRD-KDWIVDTLKP 262
Query: 75 -----SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
C L+EV ILKV+HGAF D L + + + ++DT A AL
Sbjct: 263 WRRKLEC--------LNEVFADPSILKVLHGAFMDIVWLQRDLGLYIVGLFDTFHAARAL 314
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
L LL+ + NFK Q + W+ RPL+ ++ Y
Sbjct: 315 GY------------QAASLAYLLELHV----NFKAQKQYQLAD----WRQRPLSKELFEY 354
Query: 190 AAADVESLLALFHRMTKE 207
A AD LL +F M E
Sbjct: 355 ARADTHFLLYIFDNMRNE 372
>gi|45708813|gb|AAH67962.1| exosome component 10 [Xenopus (Silurana) tropicalis]
Length = 883
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E + I+KV+HGA D L +F + + N++DT A L L H
Sbjct: 348 LNESFTNPSIIKVLHGADSDIEWLQKDFGLYIVNMFDTHQAARILNLGR----------H 397
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y N+++ R W+ RPL +M+ YA AD LL ++ +M
Sbjct: 398 S--LDHLLRLY--------CNVESDKRYQLADWRIRPLPEEMIEYARADTHYLLFIYDKM 447
>gi|403289992|ref|XP_003936119.1| PREDICTED: exosome component 10 [Saimiri boliviensis boliviensis]
Length = 884
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 25/209 (11%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 273 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 332
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 333 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 389
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 390 AARLLNLGR----------HS--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPE 429
Query: 185 DMLLYAAADVESLLALFHRMTKEYALKQN 213
+ML YA D LL ++ +M E + N
Sbjct: 430 EMLSYARDDTHYLLYIYDKMRLELWERSN 458
>gi|195037619|ref|XP_001990258.1| GH19240 [Drosophila grimshawi]
gi|193894454|gb|EDV93320.1| GH19240 [Drosophila grimshawi]
Length = 911
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ V++ Q A+A + ++ +D+E G LV ++ + K +IFD LI
Sbjct: 284 LVDSVEKLQQALAELRLAHQIAIDVEHHSYRTFMGITCLVQMSTRT-KDYIFDT----LI 338
Query: 80 MFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLL 137
+ D L+ VL ++LK++HG D L + ++ + N++DT A AL L+
Sbjct: 339 LRDDMHILNLVLTDPKVLKILHGGDLDIEWLQRDLSLYIVNMFDTHRAAKALNLA----- 393
Query: 138 SQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
+ L LLKFY + K++Q W+ RPL ++ YA D L
Sbjct: 394 -------RLSLAFLLKFYLDM--DVDKSLQLA------DWRMRPLPQKLIDYARQDTHYL 438
Query: 198 LALFHRM 204
+ ++ R+
Sbjct: 439 IYIYERL 445
>gi|348041370|ref|NP_998833.2| exosome component 10 [Xenopus (Silurana) tropicalis]
Length = 890
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E + I+KV+HGA D L +F + + N++DT A L L H
Sbjct: 355 LNESFTNPSIIKVLHGADSDIEWLQKDFGLYIVNMFDTHQAARILNLGR----------H 404
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y N+++ R W+ RPL +M+ YA AD LL ++ +M
Sbjct: 405 S--LDHLLRLY--------CNVESDKRYQLADWRIRPLPEEMIEYARADTHYLLFIYDKM 454
>gi|328767973|gb|EGF78021.1| hypothetical protein BATDEDRAFT_27210 [Batrachochytrium
dendrobatidis JAM81]
Length = 826
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 6 QPQNNLLRTLMNRTNLITDVQEAQSAMATILNE-SKVGLDLEGMDL-GVDGKVSLVSLAL 63
Q + R+L + D + + +IL ++ +DLE D G L+ ++
Sbjct: 234 QHPEEIYRSLESTPLTWIDTPDKLETLCSILEGVTEFAVDLEHHDFRSYQGFTCLMQIST 293
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEV---LESDRILKVIHGAFGDAGGLLSNFNIRLKNVY 120
+ + F+ D ++ LH + + +I+KV HGA D L +F + + +++
Sbjct: 294 RT-EDFLVDT-----LILRNSLHALNTSFANPQIVKVFHGAEMDIQWLQRDFGVYVVDLF 347
Query: 121 DTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTR 180
DT A AL+L H++ LLK+Y + + + + W+ R
Sbjct: 348 DTYHASHALELEG----------HSLAF--LLKYYCDVVTDKRYQLAD--------WRIR 387
Query: 181 PLTSDMLLYAAADVESLLALFHRMTKEYALKQN 213
PL +M+ YA D LL +F RM E K N
Sbjct: 388 PLPKEMVHYARMDTHYLLYIFDRMRNELLNKSN 420
>gi|401427101|ref|XP_003878034.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494281|emb|CBZ29580.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 750
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS-CPLIMFDG-KLHEVLESDRILKVI 98
+ LDLEG LG G + +++LA + ++I DV P + G L VLES I+K++
Sbjct: 550 IALDLEGRSLGRMGSICIITLATYS-TVYIIDVVMLGPEALRAGSPLKGVLESRDIMKLM 608
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFT-ALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
D L + +RL+NV D Q + AL + PRL V +GL
Sbjct: 609 FDGRADCDALFFLYCVRLQNVCDLQISSCFALFPTSPRLPGMKSVFLALGLF-------- 660
Query: 158 SPNNFKKNIQNLYRE--NPHI------WKTRPLTSDMLLYAAADVESLLA 199
+ I+N R NP W+ RPLT ++ Y A DV+ A
Sbjct: 661 --TDEDTGIKNAGRRLFNPLCGGSFDRWEERPLTDVLVQYCAVDVKYFFA 708
>gi|444314737|ref|XP_004178026.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
gi|387511065|emb|CCH58507.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 29/181 (16%)
Query: 38 ESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSC--PLIMFDGKLHEVLESDRI 94
+S++ +DLE DL G L+ ++ + + +I D S LI+ L+E+ + I
Sbjct: 257 QSEIAVDLEHHDLRSYYGITCLMQISTRE-QDYIVDTISLRDDLIV----LNEIFTNPNI 311
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKF 154
KV HGA D L + + + +++DT A AL L+ H++ LL+
Sbjct: 312 TKVFHGASMDIIWLQRDLGLYIVSLFDTFHASKALGLAR----------HSLAY--LLEN 359
Query: 155 YKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNR 214
Y + K + + W+ RPLT++ML YA +D LL +F ++ + +KQN+
Sbjct: 360 YASFKTSKKYQLAD--------WRRRPLTNNMLAYARSDTHFLLNIFDQL-RNTLIKQNK 410
Query: 215 L 215
L
Sbjct: 411 L 411
>gi|17567209|ref|NP_510489.1| Protein PLP-2 [Caenorhabditis elegans]
gi|3876143|emb|CAB01747.1| Protein PLP-2 [Caenorhabditis elegans]
Length = 192
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 373 PRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGP 432
P+ R + + + L + R++++DLK+N R RF+ I+ + P + IA P+ +
Sbjct: 22 PQGESRSPYCSQRKALSSNQRKFYVDLKENDRGRFLRIAPMNPRQTR-QQIAIPSDGIAE 80
Query: 433 IIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE--ISTPSKV 490
I ++++ + +++ + N+ F F+ KN +G F+RISE I +V
Sbjct: 81 IHKVLTEYLAKFGEGHEQENTNTPK-ITAENRTFLFHSGKNDRGEFVRISEEIILCQIEV 139
Query: 491 LTNIGIKSN 499
+N +SN
Sbjct: 140 YSNFIFRSN 148
Score = 42.4 bits (98), Expect = 1.2, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRYR 378
+KFY D+K++ +F++I+ +N QTR QI I + + L L H
Sbjct: 42 RKFYVDLKENDRGRFLRIAPMNPRQTRQQIAIPSDGIAEIHKVLTEYLAKFGEG--HEQE 99
Query: 379 DTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ 412
+T+T K + + R + N R FV IS+
Sbjct: 100 NTNTPK---ITAENRTFLFHSGKNDRGEFVRISE 130
>gi|340374397|ref|XP_003385724.1| PREDICTED: transcriptional activator protein Pur-alpha-like
[Amphimedon queenslandica]
Length = 280
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 307 EVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQT-RNQIHISMSVVGHLRDHLNAL 365
E +++ + NK +K + +F K+ E ++ I S+ + HL +
Sbjct: 45 EDLESHEIEAENKTITISVKSNDQGRFFKLIEQKRERKGSGHIIFSVETAPSFKRHLAEV 104
Query: 366 LTAHQN-TPRHRYRDTHTIK--SEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSS 422
+ ++ +P D + + SE + RR+++DL+ N ++ ++Q P K
Sbjct: 105 IEKYKTLSPVSTEDDNNAQRHYSESFNQGKRRFYVDLRQNSMGCYLKVTQATPTMRKF-- 162
Query: 423 IAFPAQDLGPI----IGLISDLQQEHS--------CPEDEDGAPEGNY-MRCNNKRFFFN 469
+ PA+ L + + ++ HS P++ G++ +R +K F+F+
Sbjct: 163 VLIPAEILEKVEEHFLNMLDKFGTSHSQDDSSPPRSPQNSQPPLPGSHEVRAGSKTFYFD 222
Query: 470 VSKNGKGTFMRISEISTPSKVLTNI 494
V +N +G F+R++E+ + NI
Sbjct: 223 VERNDRGVFLRLTELLPTRRTHINI 247
>gi|157124837|ref|XP_001660547.1| hypothetical protein AaeL_AAEL010007 [Aedes aegypti]
gi|108873835|gb|EAT38060.1| AAEL010007-PA [Aedes aegypti]
Length = 949
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + +++KV+HGA D L + ++ + N++DT A L+ S
Sbjct: 335 LNEVFTNPKVVKVLHGAISDIEWLQRDLSLYIVNMFDTGEAAKVLEFS------------ 382
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
IGL LLK Y NI W+ RP+ + + YA D LL ++ RM
Sbjct: 383 RIGLQFLLKHY--------CNIDTDKAYQLADWRIRPIPHNFIEYARKDTHYLLYIYDRM 434
Query: 205 TKEYALKQNRLL 216
E K L
Sbjct: 435 RNELIAKGASFL 446
>gi|330926290|ref|XP_003301407.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
gi|311323973|gb|EFQ90519.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 19 TNLITDVQEAQSAMATILNESK-VGLDLEGMD-LGVDGKVSLVSLALQNGKIFIFDVYSC 76
T + D EA +AM L +K + +DLE D G V L+ ++ ++ K +I D
Sbjct: 214 TATLVDTPEALAAMLAELKTAKEIAIDLEHHDNRTYIGMVCLMQISTRD-KDWIVDTLK- 271
Query: 77 PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
P L+EV ILKV+HGAF D L + + + ++DT A AL
Sbjct: 272 PWRRKLECLNEVFADPSILKVLHGAFMDIIWLQRDLGLYIVGLFDTFHAARALGY----- 326
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
L LL+ + NFK Q + W+ RPL+ ++ YA AD
Sbjct: 327 -------QAASLAYLLELHV----NFKAQKQYQLAD----WRQRPLSKELFEYARADTHF 371
Query: 197 LLALFHRMTKE 207
LL +F M E
Sbjct: 372 LLYIFDNMRNE 382
>gi|357471299|ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355506989|gb|AES88131.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
Length = 974
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 16 MNRTNLITDVQEAQSAMATILNESKV-GLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDV 73
MN + + D + + +L++ K G+D E L G LV ++ Q + ++ D
Sbjct: 149 MNDSYVWVDTEMQLKKLVNVLSKEKFFGVDTEQHSLRSFLGFTGLVQISTQQ-EDYLIDT 207
Query: 74 YSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
+ + D L V I KV HGA D L +F+I + N++DT A L
Sbjct: 208 ----IALHDSMEILRPVFADPSICKVFHGADNDVLWLQRDFHIYVVNLFDTSKACEV--L 261
Query: 132 SDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAA 191
S P+ L+ G+N K ++ PN YRE+ W+ RPL+++M+ YA
Sbjct: 262 SKPQKSLAYLLETYCGVN-TNKLLQVWPN---------YRED---WRQRPLSAEMVHYAR 308
Query: 192 ADVESLLALFHRMTKEYALKQNRLLLDN 219
D LL + + + E LKQ LDN
Sbjct: 309 TDAHYLLYIANCLIDE--LKQ----LDN 330
>gi|417405124|gb|JAA49287.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6 [Desmodus rotundus]
Length = 888
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTHPAIVKVFHGADSDVEWLQKDFGLYVVNMFDTHQAACLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCDVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|392340772|ref|XP_003754165.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
gi|392348530|ref|XP_003750137.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
Length = 860
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|85000709|ref|XP_955073.1| 3'-5' exonuclease [Theileria annulata strain Ankara]
gi|65303219|emb|CAI75597.1| 3'-5' exonuclease, putative [Theileria annulata]
Length = 790
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLI 79
LI + + + + + N + +D+E D G + L+ L+ +I D P
Sbjct: 479 LIDNESDFNAMLDKLKNSRILSMDVEHHDTETYRGFICLLQLSTPQEN-YIID----PFK 533
Query: 80 MFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLL 137
+F KL+ + +ILK++HGA D L +FNI + N++DT+ A L L + L
Sbjct: 534 IFGKMNKLNRLTTDPKILKIMHGACNDVIWLQRDFNIFVVNLFDTREAAIVLNLPEQSLA 593
Query: 138 SQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
I LN K ++IS N+ K+ L N I RPL +ML YA D L
Sbjct: 594 KLVQKYFNIKLN---KRFQIS--NWSKSYNCL---NCGI---RPLDDEMLDYACCDSHYL 642
Query: 198 LALFHRMTKEYALKQN 213
+ L++ + E K++
Sbjct: 643 IPLYNTLKDEILSKED 658
>gi|392340770|ref|XP_003754164.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|392348528|ref|XP_003750136.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|149024626|gb|EDL81123.1| rCG30986, isoform CRA_a [Rattus norvegicus]
Length = 885
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|342180559|emb|CCC90035.1| putative ribosomal RNA processing protein 6 [Trypanosoma congolense
IL3000]
Length = 745
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+ V+ Q+ +A +L E+++ +DLE D G L+ ++ + + FI D
Sbjct: 245 FVDAVESLQTVVAVLLKETEIAVDLEHHDFYSYQGFTCLMQISSRT-EDFIIDCLKLRSH 303
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M L V I+KV+HGA D L +F + + N++DT A L +
Sbjct: 304 MH--LLAPVFLEPSIVKVLHGAREDIRWLQKDFGLYVVNLFDTSVALQNLHM-------- 353
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
PH++ + F ++ N + W+ RP+ ++M+ YA D LL
Sbjct: 354 ---PHSLAFA-VDHFCQVKLNKKYQTAD---------WRVRPIPAEMISYAQQDTHFLLY 400
Query: 200 LFHRMTKEYALKQNRLLLDNLI 221
++ R+ + ++R + N++
Sbjct: 401 VYDRLKQLLLNCESRATVGNML 422
>gi|320583859|gb|EFW98072.1| hypothetical protein HPODL_0702 [Ogataea parapolymorpha DL-1]
Length = 729
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 41 VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIH 99
+ +DLE D G L+ L K ++ D S L L+ + I+KV H
Sbjct: 241 IAVDLEHHDYRTYHGITCLMQLTTDTKKDYLIDPLSPELRPHLVNLNVIFTDPNIVKVFH 300
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
GAF D L + + + +++DT A L L H++ LL+ Y
Sbjct: 301 GAFMDIIWLQRDLGLYVVSLFDTYHASRELGLGR----------HSLA--HLLETYVKFK 348
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDN 219
+ K + + W+ RPL S+M YA AD L+ +F++M E L QN L
Sbjct: 349 TSKKWQLAD--------WRMRPLNSEMKNYAKADTHFLIEVFYKMHSE--LVQNPDKLKK 398
Query: 220 LIYET 224
++YE+
Sbjct: 399 VLYES 403
>gi|354502292|ref|XP_003513221.1| PREDICTED: exosome component 10 isoform 2 [Cricetulus griseus]
Length = 860
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|296206702|ref|XP_002750328.1| PREDICTED: exosome component 10 isoform 2 [Callithrix jacchus]
Length = 885
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L + I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTNPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLY----CNVESNKQYQLAD----WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|296206700|ref|XP_002750327.1| PREDICTED: exosome component 10 isoform 1 [Callithrix jacchus]
Length = 860
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L + I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTNPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLY----CNVESNKQYQLAD----WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|237835553|ref|XP_002367074.1| exosome component 10, putative [Toxoplasma gondii ME49]
gi|211964738|gb|EEA99933.1| exosome component 10, putative [Toxoplasma gondii ME49]
Length = 1353
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 37/168 (22%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSC--------------PLIMFDGKLH---EVLESDRILK 96
G SLV++ L++ + ++C P +FD LH + + +ILK
Sbjct: 480 GAHSLVAIDLEHHSFHSYRGFTCLLQLSTREKDYIIDPFALFD-HLHVLNTITANPKILK 538
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
+ HGA D L +F++ + N++DT A AL VP L +LL+ Y
Sbjct: 539 IFHGADSDIIWLQRDFSVYVVNMFDTCVAARAL-----------AVPGGASLANLLQTYC 587
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N + + + W+ RPLT +M YA +D L +F M
Sbjct: 588 HVEANKQYQLAD--------WRRRPLTPEMETYARSDTHYLPFIFDVM 627
>gi|354502290|ref|XP_003513220.1| PREDICTED: exosome component 10 isoform 1 [Cricetulus griseus]
Length = 885
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLARH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDRM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|380813854|gb|AFE78801.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419273|gb|AFH32850.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947748|gb|AFI37479.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 882
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|296419821|ref|XP_002839490.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635651|emb|CAZ83681.1| unnamed protein product [Tuber melanosporum]
Length = 838
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E+ + R++KV+HGAF D L + + + ++DT A AL+ +
Sbjct: 301 LNEIFTNPRVIKVLHGAFMDIIWLQRDLGLYIVGLFDTFYAAQALEFA------------ 348
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
GL +LK Y NF + Q + W+ RPL +ML YA +D LL F M
Sbjct: 349 RFGLAHILKKYV----NFDADKQYQMAD----WRLRPLPKEMLDYARSDTHYLLYCFDCM 400
>gi|198424231|ref|XP_002122101.1| PREDICTED: similar to exosome component 10 [Ciona intestinalis]
Length = 669
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L++V + +I+KV HGA D L +F + + N++DT A L+L L + L+ H
Sbjct: 181 LNQVFTNPKIVKVFHGADQDIKWLQRDFGVYVVNLFDTGQAARVLELG---LSREYLLKH 237
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ K+ K W+ RPL+ DML YA D LL ++ M
Sbjct: 238 YCKVESDKKYQKAD------------------WRERPLSKDMLKYAQEDTHYLLYIYDMM 279
>gi|426239736|ref|XP_004013775.1| PREDICTED: exosome component 10 isoform 2 [Ovis aries]
Length = 862
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|426239734|ref|XP_004013774.1| PREDICTED: exosome component 10 isoform 1 [Ovis aries]
Length = 887
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|410350403|gb|JAA41805.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|343962561|dbj|BAK62868.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|221121078|ref|XP_002157951.1| PREDICTED: exosome component 10-like [Hydra magnipapillata]
Length = 758
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 69 FIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA 128
FI D + M+ K++E+ ILKV+HGA D G L +F + + N++DT A A
Sbjct: 291 FIIDTLALREEMY--KINEIFSDPNILKVMHGADSDIGWLQRDFGVYVVNMFDTGQA--A 346
Query: 129 LQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLL 188
L + R L+ + D K Y+++ W+ RP+ +M+L
Sbjct: 347 RTLHEDRFSLAYLLSKYCNV-DAQKQYQLAD-----------------WRIRPIPKEMIL 388
Query: 189 YAAADVESLLALF 201
YA D LL ++
Sbjct: 389 YAQEDTHYLLYVY 401
>gi|297282176|ref|XP_001103657.2| PREDICTED: exosome component 10-like isoform 3 [Macaca mulatta]
Length = 884
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|380813852|gb|AFE78800.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419271|gb|AFH32849.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947746|gb|AFI37478.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 884
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|343471692|emb|CCD15945.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 604
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+ V+ Q+ +A +L E+++ +DLE D G L+ ++ + + FI D +
Sbjct: 245 FVDAVESLQAVVAVLLKETEIAVDLEHHDFYSYQGFTCLMQISSRT-EDFIIDC-----L 298
Query: 80 MFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
+H V I+KV+HGA D L +F + + N++DT A L +
Sbjct: 299 KLRSHMHLLAPVFLEPSIVKVLHGAREDIRWLQKDFGLYVVNLFDTSVALQNLHM----- 353
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
PH++ + F ++ N + W+ RP+ ++M+ YA D
Sbjct: 354 ------PHSLAFA-VDHFCQVKLNKKYQTAD---------WRVRPIPAEMISYAQQDTHF 397
Query: 197 LLALFHRMTKEYALKQNRLLLDNLI 221
LL ++ R+ + ++R + N++
Sbjct: 398 LLYVYDRLKQLLLNCESRATVGNML 422
>gi|221506253|gb|EEE31888.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1353
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 37/168 (22%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSC--------------PLIMFDGKLH---EVLESDRILK 96
G SLV++ L++ + ++C P +FD LH + + +ILK
Sbjct: 480 GAHSLVAIDLEHHSFHSYRGFTCLLQLSTREKDYIIDPFALFD-HLHVLNTITANPKILK 538
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
+ HGA D L +F++ + N++DT A AL VP L +LL+ Y
Sbjct: 539 IFHGADSDIIWLQRDFSVYVVNMFDTCVAARAL-----------AVPGGASLANLLQTYC 587
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N + + + W+ RPLT +M YA +D L +F M
Sbjct: 588 HVEANKQYQLAD--------WRRRPLTPEMETYARSDTHYLPFIFDVM 627
>gi|4505917|ref|NP_002676.1| exosome component 10 isoform 2 [Homo sapiens]
gi|179283|gb|AAB59352.1| PM-Scl autoantigen [Homo sapiens]
gi|11136976|emb|CAC15569.1| PM-scl autoantigen [Homo sapiens]
Length = 860
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|156121019|ref|NP_001095656.1| exosome component 10 [Bos taurus]
gi|154757487|gb|AAI51675.1| EXOSC10 protein [Bos taurus]
gi|296479174|tpg|DAA21289.1| TPA: exosome component 10 [Bos taurus]
Length = 702
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|108997029|ref|XP_001103741.1| PREDICTED: exosome component 10-like isoform 4 [Macaca mulatta]
gi|355557539|gb|EHH14319.1| hypothetical protein EGK_00224 [Macaca mulatta]
Length = 884
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|410215484|gb|JAA04961.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|221485391|gb|EEE23672.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1353
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 37/168 (22%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSC--------------PLIMFDGKLH---EVLESDRILK 96
G SLV++ L++ + ++C P +FD LH + + +ILK
Sbjct: 480 GAHSLVAIDLEHHSFHSYRGFTCLLQLSTREKDYIIDPFALFD-HLHVLNTITANPKILK 538
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
+ HGA D L +F++ + N++DT A AL VP L +LL+ Y
Sbjct: 539 IFHGADSDIIWLQRDFSVYVVNMFDTCVAARAL-----------AVPGGASLANLLQTYC 587
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
N + + + W+ RPLT +M YA +D L +F M
Sbjct: 588 HVEANKQYQLAD--------WRRRPLTPEMETYARSDTHYLPFIFDVM 627
>gi|365763245|gb|EHN04775.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 733
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLXNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTXSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|313213333|emb|CBY37160.1| unnamed protein product [Oikopleura dioica]
Length = 689
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 38 ESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG--KLHEVLESDRI 94
ES++ +DLE G LV ++ + K +I D PL +++ KL+EV + +I
Sbjct: 275 ESELAVDLEHHRYRSYQGFTCLVQISSRQ-KDYILD----PLAVWEDMYKLNEVFANPKI 329
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKF 154
+K+ HG+ D L +F + + N++DT A L L+ L+ LL+
Sbjct: 330 VKIFHGSRNDMLWLQRDFGVYVVNLFDTFFAAKKLDLA------------KKSLDYLLQH 377
Query: 155 Y-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
Y KI K Q W+ RP+ +ML YA D LL ++ R+
Sbjct: 378 YCKI---RLDKRFQLA------DWRMRPIPPNMLRYARQDTHYLLYVYDRL 419
>gi|50301240|ref|NP_001001998.1| exosome component 10 isoform 1 [Homo sapiens]
gi|8928564|sp|Q01780.2|EXOSX_HUMAN RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2; AltName: Full=P100 polymyositis-scleroderma
overlap syndrome-associated autoantigen; AltName:
Full=Polymyositis/scleroderma autoantigen 100 kDa;
Short=PM/Scl-100; AltName: Full=Polymyositis/scleroderma
autoantigen 2
gi|35555|emb|CAA46904.1| PM/Scl 100kD nucleolar protein [Homo sapiens]
gi|25140242|gb|AAH39901.1| Exosome component 10 [Homo sapiens]
gi|49257470|gb|AAH73788.1| Exosome component 10 [Homo sapiens]
gi|119592085|gb|EAW71679.1| exosome component 10, isoform CRA_c [Homo sapiens]
gi|190690525|gb|ACE87037.1| exosome component 10 protein [synthetic construct]
gi|190691893|gb|ACE87721.1| exosome component 10 protein [synthetic construct]
gi|261858988|dbj|BAI46016.1| exosome component 10 [synthetic construct]
Length = 885
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|170112858|ref|XP_001887630.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637532|gb|EDR01817.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 22/119 (18%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD-PRLLSQDLV 142
+L+E+ +I+KV+HGA D L +FN+ + N++DT F A +L D PR
Sbjct: 305 QLNEIFTDPKIVKVLHGAESDVVWLQQDFNVYIVNLFDT---FHASKLLDFPR------- 354
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
H GL +LL+ Y + + + + W+ RPL +ML YA +D LL ++
Sbjct: 355 -H--GLANLLEMYCDYIPDKRYQLAD--------WRIRPLPQEMLDYARSDTHFLLFIY 402
>gi|410256430|gb|JAA16182.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|67970274|dbj|BAE01480.1| unnamed protein product [Macaca fascicularis]
Length = 673
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 25/204 (12%)
Query: 6 QPQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLAL 63
+PQ L R + + I+ + E +LN + +DLE G L+ ++
Sbjct: 274 KPQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQIST 333
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ + FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 334 RT-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTH 390
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 391 QAARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLP 430
Query: 184 SDMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 431 EEMLSYARDDTHYLLYIYDKMRLE 454
>gi|393241162|gb|EJD48685.1| hypothetical protein AURDEDRAFT_150817 [Auricularia delicata
TFB-10046 SS5]
Length = 438
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 35/206 (16%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLA-LQNGKIFIFDVYSC-- 76
L++ + AQ+A + +L+ + D EG +LG V G++ L+S+ ++ ++F+FDV +
Sbjct: 5 LVSTPEAAQNAYSFLLDSKHIFFDCEGDNLGCVGGQLRLISVGTVRARQVFLFDVAALRR 64
Query: 77 ----PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA---- 128
PL+ +VL + ILK++ D + ++ + L+ V D Q A A
Sbjct: 65 ESIQPLL-------DVLGNSAILKIVWDGRLDCVEMRRSYGVELRGVLDLQVADIASRAI 117
Query: 129 ---------LQLSDP----RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPH 175
Q +P R L + + L +L + + + K + +
Sbjct: 118 TGVSAQTKKYQRWNPLHTVRFLDTEGIHCLASLKSVLAAHGVKSSGPKSPNGKISHDR-- 175
Query: 176 IWKTRPLTSDMLLYAAADVESLLALF 201
W RPL + L YAA D+ L +F
Sbjct: 176 -WLERPLPEEYLTYAAGDIYELERVF 200
>gi|429850597|gb|ELA25856.1| 3'-5' exonuclease [Colletotrichum gloeosporioides Nara gc5]
Length = 251
Score = 49.3 bits (116), Expect = 0.010, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNGK-IFIFDVYSCPLIMFD------GKLHEVLESDRIL 95
+DLEG LG G +S++ + L + + ++ DV + F L +LES I
Sbjct: 36 MDLEGEYLGRLGTISIIQIYLSSRQHTYLIDVQTLGAASFSEPGANGTTLKTILESPSIT 95
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL---LSQDLVPHT-IGLNDL 151
KV D+ L+ +FNI L+ D Q A + S+ RL L + +V + +L
Sbjct: 96 KVFFDVRNDSDALIYHFNIDLRGFEDLQLMELASRKSNKRLLFGLKKCIVSDAQMTTGEL 155
Query: 152 LKFYKISPNNFKKNIQNLYRENP----HIWKTRPLTSDMLLYAAADVESLLALF----HR 203
L++ ++ K L+ + ++ RPL+ D+L Y DV+ L L+ +
Sbjct: 156 LEWSRVKEQGLK-----LFSPDSGGSYAVFSQRPLSRDILSYCVQDVQYLPRLWKTYDEK 210
Query: 204 MTKEYALK 211
+T + LK
Sbjct: 211 LTPAWKLK 218
>gi|195108841|ref|XP_001999001.1| GI24274 [Drosophila mojavensis]
gi|193915595|gb|EDW14462.1| GI24274 [Drosophila mojavensis]
Length = 901
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 30/207 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ V Q A+ + S++ +D+E G LV ++ + K +IFD +
Sbjct: 279 LVDSVDALQQALTELRKASQIAIDVEHHSYRTFMGITCLVQMSTRT-KDYIFDT-----L 332
Query: 80 MFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
++H VL ++LK++HGA D L + ++ + N++DT A AL ++ RL
Sbjct: 333 KLREEMHILNLVLTDPKVLKILHGADLDIEWLQRDLSLYIVNMFDTHRAAKALNMA--RL 390
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
L+ H + L D+ K +++ W+ RPL ++ YA D
Sbjct: 391 SLAFLLKHYLDL-DVDKSLQLA-----------------DWRMRPLPQKLIDYARQDTHY 432
Query: 197 LLALFHRMTKEYALKQNRLLLDNLIYE 223
L+ ++ R+T + + L ++Y+
Sbjct: 433 LIYIYERLTNDLLQSEQGLQGLRMVYQ 459
>gi|410215482|gb|JAA04960.1| exosome component 10 [Pan troglodytes]
gi|410256428|gb|JAA16181.1| exosome component 10 [Pan troglodytes]
gi|410289248|gb|JAA23224.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 335 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 392 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLSYARDDTHYLLYIYDKMRLE 454
>gi|294943277|ref|XP_002783816.1| Ribonuclease D, putative [Perkinsus marinus ATCC 50983]
gi|239896568|gb|EER15612.1| Ribonuclease D, putative [Perkinsus marinus ATCC 50983]
Length = 350
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEV--LESD-RILKVIHGAFGDAGGLLS 110
G L+ +A + K +I DV + P IM K+H+ + SD I+KV+HGA D L
Sbjct: 6 GFTCLIQIATRK-KDYIVDVLA-PGIMM--KMHDFNRITSDPGIVKVLHGADMDVQWLQR 61
Query: 111 NFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLY 170
+ + L N++DT A L+L L +LL FY +K + N
Sbjct: 62 DLSAYLCNMFDTGQAARVLELG-----------GGYSLKNLLDFY----CGYKADKANQL 106
Query: 171 RENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ W+ RPL+ M YA DV LL ++ RM +
Sbjct: 107 AD----WRQRPLSERMKQYARDDVHYLLYIYDRMRAQ 139
>gi|119592084|gb|EAW71678.1| exosome component 10, isoform CRA_b [Homo sapiens]
Length = 884
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|344283519|ref|XP_003413519.1| PREDICTED: exosome component 10 isoform 2 [Loxodonta africana]
Length = 862
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 6 QPQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLAL 63
+PQ L R + + I+ + E +LN + +DLE G L+ ++
Sbjct: 274 KPQPQLYRPVEETPCHFISSLDELVELNEKLLNCKEFAVDLEHHSYRSFLGLTCLMQIST 333
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ + FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 334 RT-EDFIVDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTH 390
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A L L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 391 QAARLLNLGR----------HS--LDHLLKHYCGVESNKQYQLAD--------WRIRPLP 430
Query: 184 SDMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 431 DEMLHYARDDTHYLLYIYDKMRLE 454
>gi|344283517|ref|XP_003413518.1| PREDICTED: exosome component 10 isoform 1 [Loxodonta africana]
Length = 887
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 6 QPQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLAL 63
+PQ L R + + I+ + E +LN + +DLE G L+ ++
Sbjct: 274 KPQPQLYRPVEETPCHFISSLDELVELNEKLLNCKEFAVDLEHHSYRSFLGLTCLMQIST 333
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ + FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 334 RT-EDFIVDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTH 390
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A L L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 391 QAARLLNLGR----------HS--LDHLLKHYCGVESNKQYQLAD--------WRIRPLP 430
Query: 184 SDMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 431 DEMLHYARDDTHYLLYIYDKMRLE 454
>gi|405969639|gb|EKC34597.1| hypothetical protein CGI_10012948 [Crassostrea gigas]
Length = 378
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 104 DAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI---SPN 160
D+G L NF I L+NV+D Q A L+ R L P ++ L ++ + Y P
Sbjct: 64 DSGALYHNFQITLQNVFDIQDAHIILEEQKGR----KLFP-SLNLRNVCRVYSPIDKVPK 118
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
+ + +++ E+ W+TRPLT++ + AA V++L+ +R K
Sbjct: 119 HEEDSMKECAVESSDYWETRPLTAEKVSVAAGHVKALIPEVYREQK 164
>gi|210147550|ref|NP_957383.2| exosome component 10 [Danio rerio]
Length = 899
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A L L
Sbjct: 350 LNETFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHHAARCLNLG------------ 397
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L+ LLK Y ++ + + + W+ RPL +ML YA AD LL ++ R+
Sbjct: 398 RNSLDHLLKVYCDVSSDKRYQLAD--------WRIRPLPDEMLKYAQADTHYLLYVYDRV 449
>gi|401623674|gb|EJS41765.1| rrp6p [Saccharomyces arboricola H-6]
Length = 733
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 39/189 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV HGAF D L + + + +++DT A A+ L PR H
Sbjct: 277 LNEVFTDPSIIKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASKAIGL--PR--------H 326
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++ ++
Sbjct: 327 SLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYDQL 376
Query: 205 TKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYIEE 264
+N+L+ N + L+ N+ KRR F ++ R L S + Y IE+
Sbjct: 377 -------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSKVYSPIEK 421
Query: 265 VNSNEYIWR 273
N WR
Sbjct: 422 ENP----WR 426
>gi|359689033|ref|ZP_09259034.1| ribonuclease D [Leptospira licerasiae serovar Varillal str.
MMD0835]
Length = 372
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFN 113
KV L+ ++ GK +IFD P+ + D L + E+ ILK+ H A D L +F
Sbjct: 27 KVCLIQIS-SKGKNYIFD----PIRLDDLNGLGPLFENPNILKIFHSASDDIKALKRDFG 81
Query: 114 IRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYREN 173
+ N+ DT + L L LL LV H ++K+ + +E
Sbjct: 82 FKFINIADTMFSSRLLDLEQNSLLY--LVEH---------YHKVKLSK---------KEQ 121
Query: 174 PHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYE 223
W+ RPL L YAA D L +++ +M +E R LLD + E
Sbjct: 122 KSNWEKRPLEKSQLQYAALDTVYLESIWTKMGEELG---KRKLLDEAVSE 168
>gi|292617367|ref|XP_697980.4| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Danio
rerio]
Length = 1361
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 33 ATILNESKVGLDLE---GMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+ + + S VG DLE G KV++V L K ++F + S + F L L
Sbjct: 59 SALSSGSAVGFDLEWPPSFTKGKTKKVAMVQLCASEDKCYLFHISS--MSGFPPGLKMFL 116
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL-VPHTIGL 148
E + I+KV G GD LLS+++I+LKN+ D LSD L ++ L L
Sbjct: 117 EDENIMKVGVGIEGDKWKLLSDYDIKLKNIVD---------LSD--LANEKLRCCEKWSL 165
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
+ L+K + + FK + W LT D YAA D + L ++ ++ +
Sbjct: 166 DGLVK-HLLKKQLFKDKLVRCSH-----WDDFSLTEDQKRYAATDAYAGLLIYQKLQE 217
>gi|426327783|ref|XP_004024690.1| PREDICTED: exosome component 10 [Gorilla gorilla gorilla]
Length = 909
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|313242411|emb|CBY34559.1| unnamed protein product [Oikopleura dioica]
Length = 420
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 32 MATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG--KLHEV 88
M + ES++ +DLE G LV ++ + K +I D PL +++ KL+EV
Sbjct: 269 MQELREESELAVDLEHHRYRSYQGFTCLVQISSRQ-KDYILD----PLAVWEDMYKLNEV 323
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL 148
+ +I+K+ HG+ D L +F + + N++DT A L L+ L
Sbjct: 324 FANPKIVKIFHGSRNDMLWLQRDFGVYVVNLFDTFFAAKKLDLA------------KKSL 371
Query: 149 NDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ LL+ Y KI K Q W+ RP+ +ML YA D LL ++ R+
Sbjct: 372 DYLLQHYCKI---RLDKRFQLA------DWRMRPIPPNMLRYARQDTHYLLYVYDRL 419
>gi|281206812|gb|EFA80996.1| 3'-5' exonuclease [Polysphondylium pallidum PN500]
Length = 1011
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
+I+KV+HG+ D L +F I + N++DT A L+ + L LL
Sbjct: 346 KIVKVLHGSESDVKWLQRDFGIYIVNMFDTGQASRILEYP------------SASLAFLL 393
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALK 211
+FY N K + + W+ RP+ +M+ YA D LL ++ R+ E LK
Sbjct: 394 RFYCGVDANKKFQLAD--------WRIRPVPEEMIKYAREDTHYLLYIYDRLRNELVLK 444
>gi|355744909|gb|EHH49534.1| hypothetical protein EGM_00210 [Macaca fascicularis]
Length = 887
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|335290494|ref|XP_003356194.1| PREDICTED: exosome component 10 isoform 2 [Sus scrofa]
Length = 861
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
>gi|119592083|gb|EAW71677.1| exosome component 10, isoform CRA_a [Homo sapiens]
Length = 899
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|402852919|ref|XP_003891154.1| PREDICTED: exosome component 10 [Papio anubis]
Length = 844
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 235 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 294
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 295 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 351
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 352 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 391
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 392 EMLSYARDDTHYLLYIYDKMRLE 414
>gi|355686789|gb|AER98187.1| exosome component 10 [Mustela putorius furo]
Length = 732
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 228 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 277
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 278 S--LDHLLKLYCGVESNKQYQLAD--------WRIRPLPEEMLHYARDDTHYLLYIYDKM 327
>gi|380016412|ref|XP_003692179.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2-like [Apis florea]
Length = 613
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 36 LNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
L+ +G D E ++ +G VSL+ LA NG +F + I KL E+L + RIL
Sbjct: 81 LSNDVLGFDCEWVN---EGPVSLLQLATFNGVCGLFRISKIGYI--PQKLEELLANKRIL 135
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV ++ D +++++ ++ N D + + L P+ L+ + +GL ++ K
Sbjct: 136 KVGVASYEDGQKIIADYGCKVCNTLDLRTLAERVNLPSPKSLAA-MSLQYLGL-EMDKLI 193
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF----HRMTKEYALK 211
K+ +N W LT + + YAA D + + ++ ++ ++Y+L
Sbjct: 194 KVRCSN---------------WNAGTLTDEQVAYAACDALASVLIYDQIMQKIKEKYSLW 238
Query: 212 QNRL 215
+N L
Sbjct: 239 ENLL 242
>gi|397503016|ref|XP_003822132.1| PREDICTED: exosome component 10 [Pan paniscus]
Length = 909
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|226487924|emb|CAX75627.1| Exosome component 10 [Schistosoma japonicum]
Length = 860
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 25/134 (18%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +I+KV HG+ D L +F + + N++DT A LQ
Sbjct: 322 LNEVFTDPKIVKVFHGSDSDLMWLQRDFGVYVVNLFDTGVAARLLQHG------------ 369
Query: 145 TIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
L+ LL+ Y I+PN K + + W+ RPL ++++ YA D LL + R
Sbjct: 370 RFSLSYLLQRYVNINPNK-KYQLAD--------WRIRPLPNELIEYARTDTHYLLHIASR 420
Query: 204 MTKEYALKQNRLLL 217
M +E Q+R LL
Sbjct: 421 MCREL---QDRNLL 431
>gi|116329422|ref|YP_799142.1| ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116329974|ref|YP_799692.1| ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116122166|gb|ABJ80209.1| Ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116123663|gb|ABJ74934.1| Ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 388
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 34/159 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLDG-LGNLFEDKKILKIFHSAIDDIKALKKD 96
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQN 168
F + N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 97 FGFKFHNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN--- 141
Query: 169 LYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 --------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|332807618|ref|XP_001136533.2| PREDICTED: exosome component 10 isoform 4 [Pan troglodytes]
Length = 909
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 299 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 358
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 359 T-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 415
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y N N Q + W+ RPL
Sbjct: 416 AARLLNLGR----------HS--LDHLLKLY----CNVDSNKQYQLAD----WRIRPLPE 455
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 456 EMLSYARDDTHYLLYIYDKMRLE 478
>gi|418720286|ref|ZP_13279484.1| 3'-5' exonuclease [Leptospira borgpetersenii str. UI 09149]
gi|418738363|ref|ZP_13294758.1| 3'-5' exonuclease [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410743264|gb|EKQ92007.1| 3'-5' exonuclease [Leptospira borgpetersenii str. UI 09149]
gi|410745856|gb|EKQ98764.1| 3'-5' exonuclease [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456888486|gb|EMF99469.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200701203]
Length = 388
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 34/159 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLDG-LGNLFEDKKILKIFHSAIDDIKALKKD 96
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQN 168
F + N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 97 FGFKFHNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN--- 141
Query: 169 LYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 --------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|335290492|ref|XP_003127631.2| PREDICTED: exosome component 10 isoform 1 [Sus scrofa]
Length = 886
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
>gi|407923871|gb|EKG16934.1| hypothetical protein MPH_05915 [Macrophomina phaseolina MS6]
Length = 817
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 19 TNLITDVQEAQSAMATILNESK-VGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSC 76
T D EA M L +K + +DLE D G V L+ ++ +N K +I D
Sbjct: 218 TATFVDTPEALDEMLAELKSAKEIAIDLEHHDTRTYIGIVCLMQISTRN-KDWIVDTLK- 275
Query: 77 PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
P L+EV ILKV+HGA+ DA L + + L ++DT A AL S L
Sbjct: 276 PWRRRLQALNEVFTDPHILKVLHGAYMDAIWLQRDLGLYLVGLFDTHHAARALGYSGGSL 335
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
L + F N Q Y+ W+ RPL ++ YA +D
Sbjct: 336 --------AFLLQKFIHF----------NAQKQYQTA--DWRMRPLPQELFDYARSDTHF 375
Query: 197 LLALFHRMTKE 207
LL ++ M E
Sbjct: 376 LLYIYDNMRNE 386
>gi|374585500|ref|ZP_09658592.1| 3'-5' exonuclease [Leptonema illini DSM 21528]
gi|373874361|gb|EHQ06355.1| 3'-5' exonuclease [Leptonema illini DSM 21528]
Length = 206
Score = 48.9 bits (115), Expect = 0.013, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 36 LNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLIMFD-----GKLHEVL 89
L +++G+D E M L ++ L+ +A +NG SC L+ D L ++
Sbjct: 20 LTATELGVDCEMMGLNPHRDRLCLIQVARENG--------SCALVQVDEANPPALLKQLF 71
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLN 149
ES++I K+ H A D L I++KN+Y T+ A + R GL
Sbjct: 72 ESEKITKIFHYARADCAFLQIRLRIQVKNLYCTKLASRMARTYTDRH----------GLK 121
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
+L+K + + +N K+I + W LT D +LYA +DV + LFH
Sbjct: 122 ELVK--EFTGDNLDKSITSTD------WGRPELTDDQMLYAQSDV---IYLFH 163
>gi|359684501|ref|ZP_09254502.1| ribonuclease D [Leptospira santarosai str. 2000030832]
gi|410449393|ref|ZP_11303448.1| 3'-5' exonuclease [Leptospira sp. Fiocruz LV3954]
gi|410016618|gb|EKO78695.1| 3'-5' exonuclease [Leptospira sp. Fiocruz LV3954]
Length = 388
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + DG L + E+ +ILK+ H A D L +F
Sbjct: 44 KVCLIQISAK-GKNYILD----PLKLRNLDG-LGTLFENKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKDE 172
>gi|339717671|pdb|3SAF|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717672|pdb|3SAF|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717673|pdb|3SAG|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717674|pdb|3SAG|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
Length = 428
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 174 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 223
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 224 S--LDHLLKLYCNVDSNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 273
Query: 205 TKE 207
E
Sbjct: 274 RLE 276
>gi|145485444|ref|XP_001428730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395818|emb|CAK61332.1| unnamed protein product [Paramecium tetraurelia]
Length = 669
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 39 SKVGLDLE-GMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-LHEVLESDRILK 96
S++ +DLE + G L+ L+ + +I D + PL G L V + RI+K
Sbjct: 218 SEIAVDLEHNHSISYLGVTCLIQLSTRTQD-YIIDPF--PLWKQLGDMLSVVFTNPRIVK 274
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
V HGA D L +F + + N++DT Q S LL Q+ LL Y
Sbjct: 275 VFHGADNDVQWLQRDFGLYIVNLFDT------FQASKELLLMQN------SFQFLLSEY- 321
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
KK+ Y+ W RPL+ +M+ YA D LL ++ RM ++
Sbjct: 322 -----CKKSTDKTYQTAD--WTQRPLSDEMIKYAQIDTHYLLYIYDRMRQD 365
>gi|410941522|ref|ZP_11373317.1| 3'-5' exonuclease [Leptospira noguchii str. 2006001870]
gi|410783321|gb|EKR72317.1| 3'-5' exonuclease [Leptospira noguchii str. 2006001870]
Length = 372
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + +G L + E +ILKV H A D L +F
Sbjct: 22 KVCLIQISAK-GKNYIID----PLKLQNLEG-LGNLFEDKKILKVFHSAIDDIKALKKDF 75
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 76 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 119
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 120 -------WEKRPLEKSQLQYAALDTVYLETIWEKMREE 150
>gi|403223072|dbj|BAM41203.1| uncharacterized protein TOT_030000466 [Theileria orientalis strain
Shintoku]
Length = 820
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 27/156 (17%)
Query: 54 GKVSLVSLAL--QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
G V L+ L+ +N + FD+++ I L+ V RILKV+HG+ D L +
Sbjct: 457 GIVCLIQLSTPEENYIVDPFDIFTKLNI-----LNVVTTDPRILKVMHGSDNDIEWLQRD 511
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYR 171
F + + N++DT+ A L L + L+ + +N K Y+++
Sbjct: 512 FGVYIVNMFDTRQAAKVLNLKEESLMKLIDKYFNVKMN---KKYQLAD------------ 556
Query: 172 ENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W RPL +ML YA +D L+ L+ +M E
Sbjct: 557 -----WSKRPLDEEMLNYACSDSNYLIPLYIKMKNE 587
>gi|392296333|gb|EIW07435.1| Rrp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 733
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|166240642|ref|XP_645586.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
gi|165988709|gb|EAL71650.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
Length = 1195
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L++V + I+KV+HG+ D L +F + + N++DT A L+
Sbjct: 310 LNQVFTNPSIVKVLHGSDSDIKWLQRDFGVYIVNMFDTGQASRILEYP------------ 357
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L LLKFY N K + + W+ R L +M+ YA D LL ++ R+
Sbjct: 358 SASLAFLLKFYCAIDANKKYQLAD--------WRIRKLPEEMIKYAREDTHYLLYIYDRL 409
Query: 205 TKEYALKQNRLLLDNLIYET--------LFNHVVPLNIRKRRQFRQNQLRRWRKDLM 253
E K N+ L + L NH++ +R+ R+ L R+ KD++
Sbjct: 410 RNELISKGNKNLGSSGTSTNTSTSTTTQLNNHLLLEVLRRSRELS---LLRYEKDIL 463
>gi|349581166|dbj|GAA26324.1| K7_Rrp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 733
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|456877521|gb|EMF92536.1| 3'-5' exonuclease [Leptospira santarosai str. ST188]
Length = 366
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + DG L + E+ +ILK+ H A D L +F
Sbjct: 22 KVCLIQISAK-GKNYILD----PLKLRNLDG-LGTLFENKKILKIFHSAIDDIKALKKDF 75
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 76 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 119
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M E
Sbjct: 120 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKDE 150
>gi|238879034|gb|EEQ42672.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 786
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 25 VQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
V+E Q + + +++ +DLE D G V L+ ++ + +I D L + D
Sbjct: 238 VEELQKMVQELKKSTEIAVDLEHHDYRSYYGIVCLMQIS-NREQDWIIDT----LALRDD 292
Query: 84 --KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
L+EV I+KV HGAF D L + + + +++DT A AL PR
Sbjct: 293 LTVLNEVFADPDIVKVFHGAFMDIIWLQRDLGLYVVSLFDTFHASRALGF--PRF----- 345
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y +FK + Q + W+ RPL+ ML YA +D LL ++
Sbjct: 346 -----SLAYLLEVYA----HFKTSKQYQLAD----WRIRPLSPPMLAYARSDTHFLLFIY 392
Query: 202 HRM 204
++
Sbjct: 393 DQL 395
>gi|151945630|gb|EDN63871.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190407342|gb|EDV10609.1| exosome complex exonuclease RRP6 [Saccharomyces cerevisiae RM11-1a]
gi|207341289|gb|EDZ69386.1| YOR001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274006|gb|EEU08922.1| Rrp6p [Saccharomyces cerevisiae JAY291]
gi|259149485|emb|CAY86289.1| Rrp6p [Saccharomyces cerevisiae EC1118]
Length = 733
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|68490644|ref|XP_710869.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432124|gb|EAK91626.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 786
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 25 VQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
V+E Q + + +++ +DLE D G V L+ ++ + +I D L + D
Sbjct: 238 VEELQKMVQELKKSTEIAVDLEHHDYRSYYGIVCLMQIS-NREQDWIIDT----LALRDD 292
Query: 84 --KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
L+EV I+KV HGAF D L + + + +++DT A AL PR
Sbjct: 293 LTVLNEVFADPDIVKVFHGAFMDIIWLQRDLGLYVVSLFDTFHASRALGF--PRF----- 345
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y +FK + Q + W+ RPL+ ML YA +D LL ++
Sbjct: 346 -----SLAYLLEVYA----HFKTSKQYQLAD----WRIRPLSPPMLAYARSDTHFLLFIY 392
Query: 202 HRM 204
++
Sbjct: 393 DQL 395
>gi|321465482|gb|EFX76483.1| hypothetical protein DAPPUDRAFT_226045 [Daphnia pulex]
Length = 544
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 29/191 (15%)
Query: 21 LITDVQEA-QSAMATILNESKVGLDLEGM-DLGVDGKVSLVSLALQNGKIFIFDVYSCPL 78
++ D EA + + +L+++ +G+DLE D G L+ ++ +I D L
Sbjct: 98 IMVDTTEAFEHLLRDLLSQTVIGVDLEHHSDRSYRGITCLMQISTDKTD-YIIDT----L 152
Query: 79 IMFDG--KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
++D L++V I+K+ GA D L +F I + N++DT A + L
Sbjct: 153 QLWDHLQPLNKVFCDPNIVKIFQGADSDVIWLQRDFGIYVVNLFDTLQAASLLGFQ---- 208
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
GL LL+ Y N K + + W+ RPL +M+ YA D
Sbjct: 209 --------KKGLYFLLQHYCQVHVNKKYQLAD--------WRIRPLPQEMVKYAREDTHY 252
Query: 197 LLALFHRMTKE 207
L+ ++ RM ++
Sbjct: 253 LIYIYERMKQD 263
>gi|255564778|ref|XP_002523383.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223537333|gb|EEF38962.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 282
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 34/172 (19%)
Query: 321 FYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQNTPRHRYRDT 380
FYFDI +++ +F+K+SE ++ + R+ I + G RD A A +N
Sbjct: 90 FYFDIGENRRGRFLKVSEASVSRNRSTIIVP---AGSTRDEGWA---AFRN--------- 134
Query: 381 HTIKSEVLIKDTRRYF-LDLKDNGRA--RFVTISQLLPVG--GKLSSIAFPAQDLGPIIG 435
I +E I +T R F L + N R V +S + G S+ PA +L
Sbjct: 135 --ILAE--INETSRLFILPNQQNSEPSERLVGLSDDVGAGFISGHSNQPAPASEL----- 185
Query: 436 LISDLQQEHSCPEDEDGAPEG--NYMRCNNKRFFFNVSKNGKGTFMRISEIS 485
++ + P ED G +R + KRFFF++ N +G F+RISE++
Sbjct: 186 ---NVDRSVELPAQEDIGNMGVSKVIRADQKRFFFDLGSNNRGHFLRISEVA 234
>gi|6324574|ref|NP_014643.1| Rrp6p [Saccharomyces cerevisiae S288c]
gi|14195186|sp|Q12149.1|RRP6_YEAST RecName: Full=Exosome complex exonuclease RRP6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|1150996|gb|AAC49480.1| hypothetical protein UNC733 [Saccharomyces cerevisiae]
gi|1420088|emb|CAA99189.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814890|tpg|DAA10783.1| TPA: Rrp6p [Saccharomyces cerevisiae S288c]
Length = 733
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|393243266|gb|EJD50781.1| hypothetical protein AURDEDRAFT_159928 [Auricularia delicata
TFB-10046 SS5]
Length = 837
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
KL EV + I+KV HGA D L +F++ + N++DT A L+ L S
Sbjct: 317 KLAEVFADENIVKVFHGAESDIVWLQQDFSLYIVNLFDTYHASKVLEFPKHSLAS----- 371
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
LL+ Y +F + + + W+ RP+ ++MLLYA +D LL ++ +
Sbjct: 372 -------LLEAY----TDFTPDKRYQLAD----WRIRPIPAEMLLYARSDTHFLLHIYDK 416
Query: 204 MTKEYALKQNRLLLDNLIYETL 225
+ +E L+++ D LI E L
Sbjct: 417 L-RELLLQRSSGTAD-LIREVL 436
>gi|323335702|gb|EGA76985.1| Rrp6p [Saccharomyces cerevisiae Vin13]
Length = 733
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|148237165|ref|NP_001084822.1| exosome component 10 [Xenopus laevis]
gi|47124776|gb|AAH70757.1| MGC83774 protein [Xenopus laevis]
Length = 883
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E + I+KV HGA D L +F + + N++DT A L L H
Sbjct: 348 LNESFTNPSIIKVFHGADSDIEWLQKDFGLYIVNMFDTHQAARILNLGR----------H 397
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y N+++ R W+ RPL +ML YA D LL ++ +M
Sbjct: 398 S--LDHLLRLY--------CNVESDKRYQLADWRIRPLPEEMLEYARVDTHYLLYIYDKM 447
>gi|70953922|ref|XP_746033.1| POM1 [Plasmodium chabaudi chabaudi]
gi|56526532|emb|CAH77590.1| POM1, putative [Plasmodium chabaudi chabaudi]
Length = 1429
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 22/170 (12%)
Query: 41 VGLDLEGMDLGVDG-KVSLVSLALQNGKIFIFDVYSCPLI-MFDGKLHEVLESDRILKVI 98
GLD+E L V G K+ L+ +A++N + I+D+++ + DG L ++L + I+K+I
Sbjct: 1245 CGLDMETTGLEVFGEKIRLIQIAVENYPVIIYDMFNITNNNILDG-LRKILNDENIVKII 1303
Query: 99 H-GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
G F L +NFNI N++DT A +LL ++ + LN++++ Y
Sbjct: 1304 QNGKFDTKFLLYNNFNIT--NIFDTYIA--------SKLLDKNKNMYGFKLNNIVEKYLS 1353
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
K QN +W L ++ L YAA D LL L+ +++++
Sbjct: 1354 VY--LDKQQQN------SVWNNSLLNNNQLFYAARDSSCLLKLYKKLSEQ 1395
>gi|328783376|ref|XP_001121410.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like [Apis
mellifera]
Length = 613
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 36 LNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
L+ +G D E ++ +G VSL+ LA NG +F + I KL E+L + RIL
Sbjct: 81 LSNDVLGFDCEWVN---EGPVSLLQLATFNGVCGLFRIGKIGYI--PQKLEELLANKRIL 135
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV ++ D +++++ ++ N D + + L P+ L+ + +GL ++ K
Sbjct: 136 KVGVASYEDGQKIIADYGCKVCNTLDLRTLAERVNLPSPKSLAA-MSLQYLGL-EMDKLI 193
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF----HRMTKEYALK 211
K+ +N W LT + + YAA D + + ++ ++ ++Y+L
Sbjct: 194 KVRCSN---------------WNAGTLTDEQVAYAACDALASVLIYDQILQKIKEKYSLW 238
Query: 212 QNRL 215
+N L
Sbjct: 239 ENLL 242
>gi|320167779|gb|EFW44678.1| exosome component 10 protein [Capsaspora owczarzaki ATCC 30864]
Length = 945
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L EV + ILKV HGA D L +F I N++DT A L+L
Sbjct: 357 LREVFANPNILKVFHGADMDVVWLQHDFGIYTINMFDTGQAARVLELG------------ 404
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L LL+++ + K + + W+ RP+ ++ML YA D LL ++ R+
Sbjct: 405 SYSLAHLLRYFCNVTADKKYQLAD--------WRIRPIPAEMLQYAREDTHYLLYIYDRL 456
Query: 205 TKEYALKQN 213
E + N
Sbjct: 457 RNELVSRSN 465
>gi|194376518|dbj|BAG57405.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 6 QPQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLAL 63
+PQ L R + + I+ + E +LN + +DLE G L+ ++
Sbjct: 274 KPQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQIST 333
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ + FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 334 RT-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTH 390
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A L L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 391 QAARLLNLGR----------HS--LDHLLKLYCNVDSNKQYQLAD--------WRIRPLP 430
Query: 184 SDMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 431 EEMLSYARDDTHYLLYIYDKMRLE 454
>gi|68490669|ref|XP_710857.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432110|gb|EAK91613.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 785
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 25 VQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
V+E Q + + +++ +DLE D G V L+ ++ + +I D L + D
Sbjct: 238 VEELQKMVQELKKSTEIAVDLEHHDYRSYYGIVCLMQIS-NREQDWIIDT----LALRDD 292
Query: 84 --KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
L+EV I+KV HGAF D L + + + +++DT A AL PR
Sbjct: 293 LTVLNEVFADPDIVKVFHGAFMDIIWLQRDLGLYVVSLFDTFHASRALGF--PRF----- 345
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y +FK + Q + W+ RPL+ ML YA +D LL ++
Sbjct: 346 -----SLAYLLEVYA----HFKTSKQYQLAD----WRIRPLSPPMLAYARSDTHFLLFIY 392
Query: 202 HRM 204
++
Sbjct: 393 DQL 395
>gi|194383644|dbj|BAG59180.1| unnamed protein product [Homo sapiens]
Length = 679
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 6 QPQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLAL 63
+PQ L R + + I+ + E +LN + +DLE G L+ ++
Sbjct: 274 KPQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQIST 333
Query: 64 QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ + FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 334 RT-EDFIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTH 390
Query: 124 CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLT 183
A L L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 391 QAARLLNLGR----------HS--LDHLLKLYCNVDSNKQYQLAD--------WRIRPLP 430
Query: 184 SDMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 431 EEMLSYARDDTHYLLYIYDKMRLE 454
>gi|322801849|gb|EFZ22421.1| hypothetical protein SINV_07950 [Solenopsis invicta]
Length = 612
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 36 LNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
L++ +G D E + +G VSL+ LA NG + +F + I F KL E+L + IL
Sbjct: 96 LSDGILGFDCEWVK---EGPVSLLQLATNNGVVALFRIGKIGYIPF--KLKELLATKHIL 150
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV +F D L+ ++ R+ D + +L L P L + + Y
Sbjct: 151 KVGVSSFEDGQKLVKDYGCRVNGTLDLRTLADSLNL-----------PSRKSLAAMCEQY 199
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L W L+ D + YAA D + + ++H++
Sbjct: 200 ------LNIEMDKLIEVRCGDWDASTLSDDQVAYAACDALASVIIYHKI 242
>gi|440638493|gb|ELR08412.1| hypothetical protein GMDG_03201 [Geomyces destructans 20631-21]
Length = 331
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 19 TNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSL-ALQNGKIFIFDVYSCP 77
T ++ + Q A+ + SK + LEG+ L G +S++SL + KI++ D+Y+
Sbjct: 31 TQILHESQHARVSHGCDNTNSKREIHLEGIRLSRHGSISIISLYVIPTAKIYLIDIYTLG 90
Query: 78 LIMFDG------KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
F L VLES I KVI D+ L S+F I + + D Q A ++
Sbjct: 91 GAAFSTTNSNSVSLKTVLESPAIPKVIFDVRNDSDALFSHFQISVDGIKDLQLMELASRM 150
Query: 132 SDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP------HIWKTRPLTSD 185
+ R L + + K + K + LY NP ++ RP+ D
Sbjct: 151 GN-RAYVAGLAKCIEKDSPVFTTVKTEWQHTKDSASRLY--NPEKGGRYEVFNERPMRPD 207
Query: 186 MLLYAAADVESLLALF 201
+ Y A DV L L+
Sbjct: 208 IKEYCARDVALLPGLY 223
>gi|193697404|ref|XP_001951643.1| PREDICTED: exosome component 10-like [Acyrthosiphon pisum]
Length = 739
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 30/172 (17%)
Query: 40 KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH---EVLESDRIL 95
++ +DLE G L+ ++ +N I +Y KLH E+ + ++
Sbjct: 230 ELAIDLEAHSYRTYQGFTCLMQISTRNADYIIDTLY------LRDKLHVLNEIFTNPAVV 283
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV HGA D L + + + N++DT A L S GL LLK Y
Sbjct: 284 KVFHGADSDIPWLQRDLGLYVVNMFDTYQAAKILNFS------------RKGLEFLLKHY 331
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ K Q LY W+TRPL+++ + YA D LL ++ + K+
Sbjct: 332 --CNVDADKTFQ-LYD-----WRTRPLSTEAIFYARCDTHYLLYVYDMIKKD 375
>gi|68075407|ref|XP_679621.1| POM1 [Plasmodium berghei strain ANKA]
gi|56500410|emb|CAH98073.1| POM1, putative [Plasmodium berghei]
Length = 1808
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 6 QPQNNLLRTLMNRTNLITDVQEAQSAMATILNESK-VGLDLEGMDLGVDG-KVSLVSLAL 63
+P+ N + R +I D + + I N K GLD+E L V G K+ L+ +++
Sbjct: 1224 EPEKNFNDNIETRFFIIND-KNYNEKINYIYNGIKYCGLDMETTGLEVFGEKIRLIQISV 1282
Query: 64 QNGKIFIFDVYSCPLI-MFDGKLHEVLESDRILKVIH-GAFGDAGGLLSNFNIRLKNVYD 121
+N + I+D+++ + DG L ++L + I+K+I G F L +NFNI N++D
Sbjct: 1283 ENYPVIIYDMFNITNNNILDG-LRKILNDENIVKIIQNGKFDTKFLLYNNFNIT--NIFD 1339
Query: 122 TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRP 181
T A +LL ++ + LN++++ Y K QN +W
Sbjct: 1340 TYIA--------SKLLDKNKNMYGFKLNNIVEKYLSVY--LDKQQQN------SVWNNSL 1383
Query: 182 LTSDMLLYAAADVESLLALFHRMTKE 207
L ++ L YAA D LL L+ +++++
Sbjct: 1384 LNNNQLFYAARDSSCLLKLYKKLSEQ 1409
>gi|410966022|ref|XP_003989537.1| PREDICTED: exosome component 10 isoform 2 [Felis catus]
Length = 862
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLY----CNVESNKQFQLAD----WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
Query: 205 TKEYALKQNR 214
E + N+
Sbjct: 452 RLELWERGNQ 461
>gi|365758455|gb|EHN00296.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 734
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH---EVLESD 92
N S++ +DLE D G V L+ ++ + + ++ D I LH EV
Sbjct: 231 NASEIAVDLEHHDYRSYYGIVCLMQVSTRE-RDYLVDT-----IELRDALHILNEVFTDP 284
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
I+KV HGAF D L + + + ++DT A A+ L PR H++ LL
Sbjct: 285 LIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR--------HSLAY--LL 332
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+ + NFK + + + W+ RPL+ M YA AD LL ++ ++ +
Sbjct: 333 ENFA----NFKTSKKYQLAD----WRARPLSKPMTAYARADTHFLLNIYDQL-------R 377
Query: 213 NRLLLDNLIYETLFNHVVPLNIRKRR-QFRQNQLRRWRKDLMSS---KRPYPYI------ 262
N+L+ N + L+ N+ KRR ++ +++ R ++ S + P+ +
Sbjct: 378 NKLIESNKLAGVLYES---RNVAKRRFEYSKHRPRTPSSEVYSPIEKENPWRVLMYQYNI 434
Query: 263 ----EEVNSNEYIWRN 274
EE+ + Y+WR+
Sbjct: 435 TSEKEELVKDLYLWRD 450
>gi|198421501|ref|XP_002119853.1| PREDICTED: similar to exosome component 10, partial [Ciona
intestinalis]
Length = 647
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 78/192 (40%), Gaps = 44/192 (22%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L++V + I+KV HGA D L +F I + N++DT A AL L H
Sbjct: 128 LNQVFANPNIIKVFHGADSDIIWLQRDFGIYVVNLFDTGQAARALGLQR----------H 177
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL Y N+Q + W+ RPL +MLLYA D LL ++ M
Sbjct: 178 S--LDYLLTHY--------CNVQADKKYQLADWRIRPLPKEMLLYAQGDTHYLLYVYDMM 227
Query: 205 TKEYALKQNRLLLDNLI----------YETLF----NHVVPLNIRKRR----QFRQNQLR 246
+ + LL +I YE +H+V L KRR FR Q+
Sbjct: 228 RLDLVKTGDPGLLHKVIDKSRDICCLKYEKPITNDTSHLVLLEKHKRRGGKKDFRPQQIE 287
Query: 247 ------RWRKDL 252
WR L
Sbjct: 288 ALRLIFAWRDGL 299
>gi|431906334|gb|ELK10531.1| Exosome component 10 [Pteropus alecto]
Length = 883
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 346 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 395
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 396 S--LDHLLKLY----CNVESNKQYQLAD----WRIRPLPEEMLNYARDDTHYLLYIYDKM 445
>gi|301774745|ref|XP_002922791.1| PREDICTED: exosome component 10-like isoform 1 [Ailuropoda
melanoleuca]
Length = 885
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 375 LNESLTDPSIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 424
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 425 S--LDHLLKLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDKM 474
>gi|424513045|emb|CCO66629.1| exosome component 10 [Bathycoccus prasinos]
Length = 911
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL 148
E++ LKV HGA D L +F I + N++DT A L+L + GL
Sbjct: 304 FENEEKLKVFHGANSDMIWLQRDFGIYVVNMFDTGQAARILELP------------SFGL 351
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE- 207
LLK Y K + + W+ RPL+ +M+ YA +D SLL + R+ +E
Sbjct: 352 AYLLKQYCGIKAEKKYQLAD--------WRLRPLSREMINYARSDTHSLLYVHDRLKQEL 403
Query: 208 YA 209
YA
Sbjct: 404 YA 405
>gi|401837803|gb|EJT41675.1| RRP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 734
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH---EVLESD 92
N S++ +DLE D G V L+ ++ + + ++ D I LH EV
Sbjct: 231 NASEIAVDLEHHDYRSYYGIVCLMQVSTRE-RDYLVDT-----IELRDALHILNEVFTDP 284
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
I+KV HGAF D L + + + ++DT A A+ L PR H++ LL
Sbjct: 285 LIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR--------HSLAY--LL 332
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+ + NFK + + + W+ RPL+ M YA AD LL ++ ++ +
Sbjct: 333 ENFA----NFKTSKKYQLAD----WRARPLSKPMTAYARADTHFLLNIYDQL-------R 377
Query: 213 NRLLLDNLIYETLFNHVVPLNIRKRR-QFRQNQLRRWRKDLMSS---KRPYPYI------ 262
N+L+ N + L+ N+ KRR ++ +++ R ++ S + P+ +
Sbjct: 378 NKLIESNKLAGVLYES---RNVAKRRFEYSKHRPRTPSSEVYSPIEKENPWRVLMYQYNI 434
Query: 263 ----EEVNSNEYIWRN 274
EE+ + Y+WR+
Sbjct: 435 TSEKEELVKDLYLWRD 450
>gi|301774747|ref|XP_002922792.1| PREDICTED: exosome component 10-like isoform 2 [Ailuropoda
melanoleuca]
Length = 887
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPSIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
>gi|409075144|gb|EKM75528.1| hypothetical protein AGABI1DRAFT_79866 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 882
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +I+KV HGA D L +FN+ + N++DT A L+ PR
Sbjct: 306 LNEVFTDPKIVKVFHGAESDIVWLQQDFNLYVVNLFDTYHASKLLEF--PRH-------- 355
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
GL +LL+ Y + + + + W+ RPL +ML YA +D LL ++
Sbjct: 356 --GLANLLEMYCDYIPDKRYQLAD--------WRIRPLPKEMLEYARSDTHFLLFIY 402
>gi|291414300|ref|XP_002723398.1| PREDICTED: exosome component 10 [Oryctolagus cuniculus]
Length = 886
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L + I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 349 LNESLTNPTIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 398
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y ++ + + + W+ RPL +ML YA D LL ++ RM
Sbjct: 399 S--LDHLLKLYCSVDSDKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDRM 448
Query: 205 TKE 207
E
Sbjct: 449 RLE 451
>gi|426195548|gb|EKV45477.1| hypothetical protein AGABI2DRAFT_186278 [Agaricus bisporus var.
bisporus H97]
Length = 870
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +I+KV HGA D L +FN+ + N++DT A L+ PR
Sbjct: 326 LNEVFTDPKIVKVFHGAESDIVWLQQDFNLYVVNLFDTYHASKLLEF--PRH-------- 375
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
GL +LL+ Y + + + + W+ RPL +ML YA +D LL ++
Sbjct: 376 --GLANLLEMYCDYIPDKRYQLAD--------WRIRPLPKEMLEYARSDTHFLLFIY 422
>gi|410966020|ref|XP_003989536.1| PREDICTED: exosome component 10 isoform 1 [Felis catus]
Length = 887
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLY----CNVESNKQFQLAD----WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
Query: 205 TKEYALKQNR 214
E + N+
Sbjct: 452 RLELWERGNQ 461
>gi|449670884|ref|XP_004207375.1| PREDICTED: uncharacterized protein LOC101237408, partial [Hydra
magnipapillata]
Length = 965
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 21 LITDVQEAQSAMATILNESKV-GLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ + +A+ T LN KV + EG + G +SL+++A + ++I D L
Sbjct: 79 LLNSLNNEFNAVMTKLNNQKVLSIIAEGQAVNRFGHISLLTVASRE-MVYIID-----LE 132
Query: 80 MFDG---KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
FDG L +++E+ +LKV+H + L + I KN++DTQ A ++ R
Sbjct: 133 AFDGFPNSLKDLIENANVLKVVHDVRMTSDCLYHIYGICPKNIFDTQVADAFIK----RQ 188
Query: 137 LSQDLVPHTIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAA 191
+ + L ++ Y I P F+ + ++ ++ ++W+ RPL D L A
Sbjct: 189 MFGEFPDEVTSLAKCVETYLGICPCTFETDKSSIIQKTRNVWEKRPLHKDFLSVCA 244
>gi|421095097|ref|ZP_15555810.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200801926]
gi|410361807|gb|EKP12847.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200801926]
Length = 439
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 34/159 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSN 111
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +
Sbjct: 94 SKVCLIQISAK-GKNYIID----PLKLQNLDG-LGNLFEDKKILKIFHSAIDDIKALKKD 147
Query: 112 FNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQN 168
F + N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 148 FGFKFHNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN--- 192
Query: 169 LYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 193 --------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 223
>gi|395841111|ref|XP_003793392.1| PREDICTED: exosome component 10 [Otolemur garnettii]
Length = 881
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 347 LNESFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 396
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 397 S--LDHLLKLY----CNVESNKQYQLAD----WRIRPLPEEMLSYARDDTHYLLYIYDKM 446
Query: 205 TKE 207
E
Sbjct: 447 RLE 449
>gi|348571395|ref|XP_003471481.1| PREDICTED: exosome component 10-like isoform 2 [Cavia porcellus]
Length = 860
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L + I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTNPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRVRPLPEEMLSYARDDTHYLLYIYDKM 451
>gi|302824709|ref|XP_002993995.1| hypothetical protein SELMODRAFT_138032 [Selaginella moellendorffii]
gi|300138157|gb|EFJ04935.1| hypothetical protein SELMODRAFT_138032 [Selaginella moellendorffii]
Length = 269
Score = 48.1 bits (113), Expect = 0.021, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 61/222 (27%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ 370
+K Q +K FYFD+K++ +++KISE +R+ I + S + D N
Sbjct: 13 SKSLQVEHKLFYFDLKENPRGRYLKISE-KTTTSRSTIIVPESGIVWFLDLFNLYSNGDD 71
Query: 371 NTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQD- 429
+S+ L DT+ ++ D+ +N R RF+ IS++ + S+I P+ +
Sbjct: 72 K-----------FESKELQMDTKVFYFDVGENPRGRFLKISEVSAASVR-STIIVPSGND 119
Query: 430 -------LGPIIGLISDLQQ-------------------EHSCPEDE---DG-------- 452
++ I + Q + S P + DG
Sbjct: 120 ADEGWVQFRHVLAEIHEASQMLLSSIENRQVSSQVLLKFQKSSPINAGFYDGPVRNGPTV 179
Query: 453 APEGN----------YMRCNNKRFFFNVSKNGKGTFMRISEI 484
AP N +R K+FFF++ N +G ++RISE+
Sbjct: 180 APPSNDTSRMSSTARVLRAEQKKFFFDLGSNARGQYLRISEV 221
Score = 43.5 bits (101), Expect = 0.44, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQ 442
+ S+ L + + ++ DLK+N R R++ IS+ S+I P I DL
Sbjct: 11 LMSKSLQVEHKLFYFDLKENPRGRYLKISE--KTTTSRSTIIVPESG----IVWFLDLFN 64
Query: 443 EHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+S +D+ + E ++ + K F+F+V +N +G F++ISE+S S
Sbjct: 65 LYSNGDDKFESKE---LQMDTKVFYFDVGENPRGRFLKISEVSAAS 107
>gi|418746085|ref|ZP_13302416.1| 3'-5' exonuclease [Leptospira santarosai str. CBC379]
gi|410792916|gb|EKR90840.1| 3'-5' exonuclease [Leptospira santarosai str. CBC379]
Length = 388
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + DG L + E+ +ILK+ H A D L +F
Sbjct: 44 KVCLIQISAK-GKNYILD----PLKLRNLDG-LGTLFENKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWGKMKDE 172
>gi|348571393|ref|XP_003471480.1| PREDICTED: exosome component 10-like isoform 1 [Cavia porcellus]
Length = 885
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L + I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTNPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLRLYCGVESNKQYQLAD--------WRVRPLPEEMLSYARDDTHYLLYIYDKM 451
>gi|326932437|ref|XP_003212324.1| PREDICTED: exosome component 10-like [Meleagris gallopavo]
Length = 888
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV+HGA D L +F + L N++DT A RLL +L H
Sbjct: 348 LNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAA--------RLL--NLGKH 397
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y + + + + W+ RPL +M+ YA D LL ++ +M
Sbjct: 398 S--LDHLLKLYCSVDADKQYQLAD--------WRIRPLPEEMIQYARDDTHYLLYIYDKM 447
>gi|418752957|ref|ZP_13309213.1| 3'-5' exonuclease [Leptospira santarosai str. MOR084]
gi|422002805|ref|ZP_16350040.1| ribonuclease D [Leptospira santarosai serovar Shermani str. LT 821]
gi|409966640|gb|EKO34481.1| 3'-5' exonuclease [Leptospira santarosai str. MOR084]
gi|417258550|gb|EKT87937.1| ribonuclease D [Leptospira santarosai serovar Shermani str. LT 821]
Length = 388
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + DG L + E+ +ILK+ H A D L +F
Sbjct: 44 KVCLIQISAK-GKNYILD----PLKLRNLDG-LGTLFENKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWGKMKDE 172
>gi|281349256|gb|EFB24840.1| hypothetical protein PANDA_011805 [Ailuropoda melanoleuca]
Length = 834
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPSIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCGVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|359319089|ref|XP_003638993.1| PREDICTED: exosome component 10 isoform 1 [Canis lupus familiaris]
Length = 861
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPTIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
>gi|74196546|dbj|BAE34397.1| unnamed protein product [Mus musculus]
Length = 265
Score = 47.8 bits (112), Expect = 0.023, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G +V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + L ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|421110867|ref|ZP_15571356.1| 3'-5' exonuclease [Leptospira santarosai str. JET]
gi|410803772|gb|EKS09901.1| 3'-5' exonuclease [Leptospira santarosai str. JET]
Length = 366
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + DG L + E+ +ILK+ H A D L +F
Sbjct: 22 KVCLIQISAK-GKNYILD----PLKLRNLDG-LGTLFENKKILKIFHSAIDDIKALKKDF 75
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 76 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 119
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M E
Sbjct: 120 -------WEKRPLEKSQLQYAALDTVYLETIWGKMKDE 150
>gi|170035413|ref|XP_001845564.1| exosome component 10 [Culex quinquefasciatus]
gi|167877380|gb|EDS40763.1| exosome component 10 [Culex quinquefasciatus]
Length = 796
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +++KV+HG+ D L + + + N++DT A L+ S
Sbjct: 325 LNEVFTDTKVVKVLHGSISDIEWLQRDLALYVVNMFDTGEAAKVLEFS------------ 372
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
IGL LLK Y NI+ W+ RP+ + + YA D LL ++ RM
Sbjct: 373 RIGLQFLLKHY--------CNIETDKAYQLADWRIRPIPKNFIEYARKDTHYLLYIYDRM 424
Query: 205 TKE 207
E
Sbjct: 425 RNE 427
>gi|28278907|gb|AAH45429.1| Zgc:55695 protein [Danio rerio]
Length = 500
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A L L
Sbjct: 350 LNETFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHHAARCLNLG------------ 397
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L+ LLK Y ++ + + + W+ RPL +ML YA AD LL ++ R+
Sbjct: 398 RNSLDHLLKVYCDVSSDKRYQLAD--------WRIRPLPDEMLKYAQADTHYLLYVYDRV 449
>gi|71051605|ref|NP_001012748.1| exosome component 10 [Gallus gallus]
Length = 910
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV+HGA D L +F + L N++DT A RLL +L H
Sbjct: 370 LNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAA--------RLL--NLGKH 419
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y + + + + W+ RPL +M+ YA D LL ++ +M
Sbjct: 420 S--LDHLLKLYCSVDADKQYQLAD--------WRIRPLPEEMIQYARDDTHYLLYIYDKM 469
>gi|307107266|gb|EFN55509.1| hypothetical protein CHLNCDRAFT_133914 [Chlorella variabilis]
Length = 1092
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L + ++KV+HGA D L +F + L N++DT A L +
Sbjct: 313 LAPIFADPGVVKVLHGADSDVAWLQRDFGLFLANLFDTGQAARVLGM------------R 360
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
GL LL FY FK + + + W+ RPLT +ML YA +D LL + ++
Sbjct: 361 GHGLAHLLDFY----CGFKADKRFQLAD----WRVRPLTPEMLHYARSDTHHLLYCYDKL 412
>gi|51013151|gb|AAT92869.1| YOR001W [Saccharomyces cerevisiae]
Length = 733
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 221 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 274
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 275 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 325
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++
Sbjct: 326 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAYARADTHFLLNIYD 374
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 375 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FGYSKYR----PLTPSSEVYSPI 419
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 420 EK----ESPWKILMYQYNIP 435
>gi|50552133|ref|XP_503541.1| YALI0E04444p [Yarrowia lipolytica]
gi|49649410|emb|CAG79122.1| YALI0E04444p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
+EVL +I+KV+HGA D L +F + + +++DT A AL L H
Sbjct: 284 FNEVLTDPKIVKVLHGATMDIQWLQRDFGLYIVSLFDTFHAAQALGLKG----------H 333
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ Y + K + + W+ RP++ + LLYA AD LL ++ ++
Sbjct: 334 SLAF--LLQHYANFVTSKKYQLSD--------WRIRPMSPEQLLYARADTHFLLNIYDQL 383
>gi|359319087|ref|XP_535408.4| PREDICTED: exosome component 10 isoform 2 [Canis lupus familiaris]
Length = 886
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTDPTIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
>gi|345306474|ref|XP_001508312.2| PREDICTED: Werner syndrome ATP-dependent helicase-like
[Ornithorhynchus anatinus]
Length = 1751
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 34 TILNESKV-GLDLEG---MDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
T LN+ V G D+E G G+V+L+ L + + K ++F + S + F L +L
Sbjct: 322 TSLNDGSVIGFDIEWPPTYSKGKLGRVALIQLCVSDQKCYLFHISS--MSGFPKGLKMLL 379
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL-VPHTIGL 148
E++ I K G GD LLS+F I+LK+ ++L+D + ++ L L
Sbjct: 380 ENEAIRKAGVGIEGDQWKLLSDFEIKLKSF---------VELAD--VANEKLKCKEKWSL 428
Query: 149 NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
N L+K F K + W PLT D LYAA D + ++ ++
Sbjct: 429 NSLVKHL------FNKQLLKDKAIRCSSWDEFPLTEDQKLYAATDAYAGFIIYQKLA 479
>gi|209881893|ref|XP_002142384.1| exosome component 10 [Cryptosporidium muris RN66]
gi|209557990|gb|EEA08035.1| exosome component 10, putative [Cryptosporidium muris RN66]
Length = 1029
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 41 VGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIH 99
+ +DLE + G V L+ ++ + +I D + PL +L+E+ + RILK+ H
Sbjct: 401 LAIDLEHHSMQTFRGFVCLIQMSTRTCD-YIIDPF--PLFEELSRLNELTTNPRILKLFH 457
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
G+ D L +F++ + N++DT A L P L +LL Y
Sbjct: 458 GSDYDIIWLQRDFSVYVVNMFDTGQAARVLN-----------TPGGYSLGNLLNLYCSVE 506
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLL 217
N + + + W+ RPL ++ YA +D H + Y + +N+LLL
Sbjct: 507 ANKQYQLSD--------WRERPLPQHLIEYARSDT-------HYLPYIYDIMKNQLLL 549
>gi|398334995|ref|ZP_10519700.1| ribonuclease III [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 366
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIM--FDGKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + DG L + E +ILK+ H A D L +F
Sbjct: 22 KVCLIQISAK-GKNYIID----PLKLQNLDG-LGTLFEDKKILKIFHSAIDDIKALKKDF 75
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 76 GFKFVNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 119
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 120 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 150
>gi|444728183|gb|ELW68647.1| Serine/threonine-protein kinase mTOR [Tupaia chinensis]
Length = 3780
Score = 47.8 bits (112), Expect = 0.027, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 3041 LNESFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQA--------ARLL--NLGRH 3090
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 3091 S--LDHLLKLYCSVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 3140
Query: 205 TKE 207
E
Sbjct: 3141 RLE 3143
>gi|242767043|ref|XP_002341292.1| exosome component 3'-5' exonuclease [Talaromyces stipitatus ATCC
10500]
gi|218724488|gb|EED23905.1| exosome complex exonuclease Rrp6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 771
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 24 DVQEAQSAMATILNESK-VGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLIMF 81
D E + M L ++K + +DLE D+ G VSL+ ++ ++ K ++ D P
Sbjct: 232 DTPEGVAEMVEELKKAKEIAVDLEHHDVHTYYGLVSLMQISTRD-KDWVVDTLQ-PWRED 289
Query: 82 DGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
+L+EV ILKV HG+ D L + + + +++DT A AL P+
Sbjct: 290 LQRLNEVFTDPNILKVFHGSTMDIVWLQRDLGLYVVSLFDTYHAAVALGF--PKR----- 342
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y + K + + W+ RPLT +ML YA AD LL ++
Sbjct: 343 -----SLKFLLEKYAHYEADKKYQMAD--------WRLRPLTDEMLKYARADTHYLLYIY 389
>gi|432098121|gb|ELK28008.1| Exosome component 10 [Myotis davidii]
Length = 876
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 341 LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 390
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 391 S--LDHLLKHY----CNVESNKQYQLAD----WRIRPLPEEMLNYARDDTHYLLYIYDKM 440
Query: 205 TKE 207
E
Sbjct: 441 RLE 443
>gi|374855272|dbj|BAL58133.1| DNA polymerase I [uncultured Acidobacteria bacterium]
Length = 589
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 16 MNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVY 74
M+ +IT E ++ + +L E +G+D E L G++ L+ +A IF+ D++
Sbjct: 1 MSTYRVITQTAELEALRSRLLAEPVLGVDTETTALDPYQGRIRLLQIATPE-DIFVLDLF 59
Query: 75 SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
+ L D L VLE ++ +KV+H A DA L + I L V+DT
Sbjct: 60 ALGLQALD-ILRPVLEGEQPVKVLHNAKFDAKMLRHHAGIELGRVFDT------------ 106
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI--WKTRPLTSDMLLYAAA 192
+L+ LV D+ K + ++ + ++ ++ + P + W L+ L YAA
Sbjct: 107 -MLASQLV----AAGDMTKRHGLA-DVAQRYLRERVEKAPQLSDWSGE-LSRGQLEYAAR 159
Query: 193 DVESLLAL 200
DV LL L
Sbjct: 160 DVAILLPL 167
>gi|367005124|ref|XP_003687294.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
gi|357525598|emb|CCE64860.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
Length = 743
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 34/184 (18%)
Query: 29 QSAMATILNE----SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
+ ++A +LNE +++ +DLE D G L+ ++ +N Y I
Sbjct: 216 EESLAAMLNELKTATELAVDLEHHDFRSYYGITCLMQISTRNTD------YLVDTIALRD 269
Query: 84 KLHE---VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
KL V +I K++HGAF D L + + + +++DT A AL PR
Sbjct: 270 KLQVLNVVFTDPKITKILHGAFMDIIWLQRDLGLYIVSLFDTYHASRALGF--PR----- 322
Query: 141 LVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
H++ LL+ + +FK + Q + W+TRPL+ M YA AD LL +
Sbjct: 323 ---HSLAY--LLERFA----HFKTSKQYQLAD----WRTRPLSKAMNAYARADTHFLLNI 369
Query: 201 FHRM 204
F ++
Sbjct: 370 FDQL 373
>gi|302810633|ref|XP_002987007.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
gi|300145172|gb|EFJ11850.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
Length = 797
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 24 DVQEAQSAMATILNESKVGLDLEGMDLGVDG---KVSLVSLAL-------QNGKIFIFDV 73
D + Q + + S + LD E + V G +VSL+ +A ++ +FI DV
Sbjct: 22 DGEAFQGFLLALQESSVIALDAEWKPVSVAGTHPRVSLLQIACRKRDFGPESDLVFIVDV 81
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGD----AGGLLSNFNIRLKNVYDTQCAFTAL 129
S P L E LE+ RILK+ D A L S + + D + +
Sbjct: 82 LSIPASALLQPLEEALETSRILKLGFKLRQDLINLAASLSSTASFSCEPYIDIGKLYHEV 141
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
+ +PR L D T L+ + + + K++Q W+ RPLT + + Y
Sbjct: 142 KRKNPRKLPGD----TPSLSHICR--DVFGRPLCKSLQC------SDWELRPLTEEQISY 189
Query: 190 AAADVESLLALFHRM 204
AAAD LLA+ +
Sbjct: 190 AAADAHCLLAILDAL 204
>gi|351707404|gb|EHB10323.1| Exonuclease 3'-5' domain-containing protein 1 [Heterocephalus
glaber]
Length = 293
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL--NDLLK 153
+VIH + L + I L NV+DTQ A Q S + + +P+ I L++
Sbjct: 111 QVIHDCRWLSDCLSHQYGIMLNNVFDTQVA-DVFQFS---METGGFLPNCISTLQQSLIR 166
Query: 154 FYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
++P +F ++ Q L +ENP +W TRPL +L A +V LL L
Sbjct: 167 HLNVAPKYLSFLEDRQKLTQENPEVWFTRPLPPSLLKMLALEVTYLLPL 215
>gi|301060312|ref|ZP_07201175.1| putative ribonuclease D [delta proteobacterium NaphS2]
gi|300445508|gb|EFK09410.1| putative ribonuclease D [delta proteobacterium NaphS2]
Length = 381
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 27 EAQSAMATILN-ESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFD-G 83
EA +++ IL E+ + +DLE + KV L+ + + I + PL + D
Sbjct: 15 EALTSIVGILQKETAIAVDLEADSMFHYQEKVCLLQFSTPSKNILVD-----PLAVKDLS 69
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
L + +S I K+ HGA D L +F I + ++DTQ A L L+D
Sbjct: 70 PLAPIFKSFGICKIFHGADYDIRSLYRDFKIEVNALFDTQIAARFLGLTD---------- 119
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
IGL LL+ K NI + W RPL + ML YA D L+ L
Sbjct: 120 --IGLASLLQ--------GKLNITLKKKYQKKDWSQRPLPAPMLQYAVHDTCHLIPLAQN 169
Query: 204 MTKEYALKQNRL 215
+ +E +K RL
Sbjct: 170 LREEL-VKTGRL 180
>gi|2645409|gb|AAB87366.1| homolog of human Werners syndrome protein [Mus musculus]
Length = 643
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 41 VGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + GK V+++ L + K ++F + S + +F L +LE+ I K
Sbjct: 73 VGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISS--MSVFPQGLKMLLENKSIKKA 130
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+++L++ + T A L+ ++ L+ LV H +G LLK
Sbjct: 131 GVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLN-GLVKHVLG-KQLLKDKS 188
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ ++
Sbjct: 189 IRCSN---------------WSNFPLTEDQKLYAATDAYAGFIIYRKI 221
>gi|171689072|ref|XP_001909476.1| hypothetical protein [Podospora anserina S mat+]
gi|170944498|emb|CAP70609.1| unnamed protein product [Podospora anserina S mat+]
Length = 328
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVS-LALQNGKIFIFDV------ 73
L+T+VQ ++ +ATI S + +DLEG +LG G + L++ L + K+ I DV
Sbjct: 14 LVTNVQALRNFLATIGPSSSIYVDLEGTNLGRGGTLDLITVLVPPDRKVRIIDVKAMGNQ 73
Query: 74 -YSCPLIMFDG-KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
++ P D L +LE I K + DA L S +++ + V D LQL
Sbjct: 74 AFTTPSKKDDNVTLKSILEDPSIRKYLWDVRNDADALKSLYHVAISGVID-------LQL 126
Query: 132 SDPRLLSQDLVPHTIGL-----NDLLKFYKISPNNFKKNIQNLYRE----NPHIWKTRPL 182
+ L Q + GL ND L+ + +KK +++ + + I+ TRP
Sbjct: 127 LE-NLTRQGNSFYVTGLDKAVEND-LRLDQQEQIEWKKTKEDIRKRMASGDSGIFSTRPF 184
Query: 183 TSDMLLYAAADVESL 197
T+ +L Y A DV+ L
Sbjct: 185 TTPVLRYCAGDVQFL 199
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 21 LITDVQEAQSAMATILNESK----VGLDLEGM-DLGVDGKVSLVSLALQNGKIFIFDVYS 75
++T+ +E Q + T+ N + +G D E + + G V+L+ LA G + +
Sbjct: 49 VVTNAEECQQVVGTLRNHCRDYRILGFDCEWVTEKGKRHPVALLQLASHQGLCALIRL-- 106
Query: 76 CPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
C + +L E+L ILKV GA DA L S++N+++++ D + ++ P
Sbjct: 107 CQMKRIPPELGELLNDPGILKVGIGAIEDAQLLRSDYNLKVESALDLRHLAERCRVPGPY 166
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
+++ L ++GL L K +++ ++ W+ L+ L YAA D
Sbjct: 167 GMAR-LAEKSLGLQ-LDKHWRVRASD---------------WEALELSERQLKYAANDAH 209
Query: 196 SLLALF 201
+ LF
Sbjct: 210 VAVELF 215
>gi|425768291|gb|EKV06818.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
Pd1]
gi|425770373|gb|EKV08846.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
PHI26]
Length = 754
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 52/247 (21%)
Query: 40 KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
++ +DLE D+ G VSL+ ++ + GK ++ D P L+EV +ILKV+
Sbjct: 243 EIAIDLEHHDVHSYHGLVSLMQISTR-GKDWVIDTLQ-PWREDLQILNEVFADPKILKVL 300
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKIS 158
HG+ D L + + + ++DT A +AL LKF
Sbjct: 301 HGSTMDIIWLQRDLGLYVVGMFDTFHAASALGFP----------------KRSLKFLLSK 344
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLD 218
NF+ + R W+ RPL M YA +D LL ++ R+ + L+D
Sbjct: 345 FVNFEAD----KRYQTADWRARPLPPAMFDYARSDTHYLLYIYDRLRND--------LID 392
Query: 219 NLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYIEEVNSN------EYIW 272
N E +H+ +N R + + L+R+ + P + VN + + +W
Sbjct: 393 NSTEEA--SHIDYVNERSKHE----ALQRYER---------PVYDAVNGHGPGGWYDLLW 437
Query: 273 RNDYNVP 279
RN N+P
Sbjct: 438 RNSGNLP 444
>gi|154278130|ref|XP_001539887.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413472|gb|EDN08855.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 441
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 43 LDLEGMDLGVDGKVSLVSL-ALQNGKIFIFDVY-------SCPLIMFDGKLHEVLESDRI 94
+DLEG++LG G +S++SL A+ G ++ DVY S P + L ++ES I
Sbjct: 57 VDLEGINLGRSGSISILSLYAVHKGITYLVDVYKLGKAAFSSPQPGQNTSLQGIMESPTI 116
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
KV+ ++ L S++NI L + D Q
Sbjct: 117 KKVMFDVRNESDALFSHYNIHLDGIQDLQ 145
>gi|393241136|gb|EJD48659.1| hypothetical protein AURDEDRAFT_183239 [Auricularia delicata
TFB-10046 SS5]
Length = 380
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCPLI 79
L+T +A+A + + LD EG LG + G +SL+S+ G+IF+FD + I
Sbjct: 6 LVTTTTAVDNALAALACSPFLYLDCEGHRLGCIGGALSLLSVGTTCGRIFLFDAIALRAI 65
Query: 80 MFDGKLHEVL----ESDRILKVIHGAFGDAGGLLSNFNIRLK--NVYDTQCA----FTAL 129
G+L VL S+RI V G D L +RL+ V D Q A
Sbjct: 66 ---GQLQRVLNAVAGSERITYVWDGR-KDYSELWHGHGVRLRAGRVLDLQIADVGRRAGA 121
Query: 130 QLSDPRLLSQDLVPHTIG-LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLL 188
Q P + H +G L +L+ + I ++ R W RPL D++
Sbjct: 122 QAEQPGV-------HQLGSLKGVLREHGIR-GHYPAE-----RARHDEWMIRPLPEDLVS 168
Query: 189 YAAADVESL-LALFHRMTKEYALKQNRLLLDNLIYETLFNHVVP 231
YA D+ L LA H + Y + LL + Y TL P
Sbjct: 169 YAVRDIIILALAREHFSRRGYLDDTDALLAQSARYITLHERFRP 212
>gi|242000324|ref|XP_002434805.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498135|gb|EEC07629.1| conserved hypothetical protein [Ixodes scapularis]
Length = 492
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 28/171 (16%)
Query: 50 LGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH------EVLESDRILKVIHGAFG 103
L V G++SLV LA+ +G +++ D+ ++ G+ H E+L SD ILK+ +G
Sbjct: 288 LKVRGRLSLVQLAVWDG-VYVLDILKLSEVL--GESHWRQLYTEILSSDDILKLGYGIVE 344
Query: 104 DAGGLLSNF----NIRLKNVYDTQCAFTA-LQLSDPRLLSQDLVP---HTIGLNDLLKFY 155
D LLS + + +N D C+F+ L+ P L+ + ++P GL++L +
Sbjct: 345 DLK-LLSEVAKCPSAKARNFIDL-CSFSEKLRQKHPSLM-KPVIPKDREHKGLSELTRTL 401
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
P N + + W+ RPL S + YAA D LL ++ + K
Sbjct: 402 LGLPLNKDEQCSD--------WENRPLRSSQMRYAALDAFCLLQVYEELFK 444
>gi|421121879|ref|ZP_15582169.1| 3'-5' exonuclease [Leptospira interrogans str. Brem 329]
gi|410345216|gb|EKO96335.1| 3'-5' exonuclease [Leptospira interrogans str. Brem 329]
Length = 388
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|45659084|ref|YP_003170.1| ribonuclease D [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|294828464|ref|NP_714272.2| ribonuclease D [Leptospira interrogans serovar Lai str. 56601]
gi|386075688|ref|YP_005990008.1| ribonuclease D [Leptospira interrogans serovar Lai str. IPAV]
gi|417761741|ref|ZP_12409746.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000624]
gi|417771399|ref|ZP_12419294.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417772941|ref|ZP_12420827.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000621]
gi|417785994|ref|ZP_12433691.1| 3'-5' exonuclease [Leptospira interrogans str. C10069]
gi|418667421|ref|ZP_13228833.1| 3'-5' exonuclease [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671067|ref|ZP_13232422.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000623]
gi|418683302|ref|ZP_13244507.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692063|ref|ZP_13253144.1| 3'-5' exonuclease [Leptospira interrogans str. FPW2026]
gi|418702415|ref|ZP_13263323.1| 3'-5' exonuclease [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418704115|ref|ZP_13264995.1| 3'-5' exonuclease [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418710116|ref|ZP_13270898.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418728912|ref|ZP_13287481.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12758]
gi|421083604|ref|ZP_15544478.1| 3'-5' exonuclease [Leptospira santarosai str. HAI1594]
gi|421101603|ref|ZP_15562215.1| 3'-5' exonuclease [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421115524|ref|ZP_15575929.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421126273|ref|ZP_15586510.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135637|ref|ZP_15595758.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|45602330|gb|AAS71807.1| ribonuclease D [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|293386317|gb|AAN51290.2| ribonuclease D [Leptospira interrogans serovar Lai str. 56601]
gi|353459480|gb|AER04025.1| ribonuclease D [Leptospira interrogans serovar Lai str. IPAV]
gi|400324875|gb|EJO77159.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400358126|gb|EJP14242.1| 3'-5' exonuclease [Leptospira interrogans str. FPW2026]
gi|409942474|gb|EKN88086.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000624]
gi|409946596|gb|EKN96605.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409950823|gb|EKO05345.1| 3'-5' exonuclease [Leptospira interrogans str. C10069]
gi|410012826|gb|EKO70912.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020301|gb|EKO87105.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410368775|gb|EKP24151.1| 3'-5' exonuclease [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433965|gb|EKP78302.1| 3'-5' exonuclease [Leptospira santarosai str. HAI1594]
gi|410436223|gb|EKP85342.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410577276|gb|EKQ40272.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000621]
gi|410581930|gb|EKQ49736.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000623]
gi|410757024|gb|EKR18642.1| 3'-5' exonuclease [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410758584|gb|EKR24813.1| 3'-5' exonuclease [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410766337|gb|EKR37024.1| 3'-5' exonuclease [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410769574|gb|EKR44805.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410776315|gb|EKR56294.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12758]
gi|455667095|gb|EMF32456.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|455792168|gb|EMF43937.1| 3'-5' exonuclease [Leptospira interrogans serovar Lora str. TE
1992]
gi|456823784|gb|EMF72221.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456966971|gb|EMG08438.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 388
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|224079457|ref|XP_002190659.1| PREDICTED: exosome component 10-like, partial [Taeniopygia guttata]
Length = 504
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV+HGA D L +F + L NV+DT A L L H
Sbjct: 356 LNETFTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGR----------H 405
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y + K + + W+ RPL +M+ YA D LL ++ ++
Sbjct: 406 S--LDHLLKLYCGVDADKKYQLAD--------WRIRPLPEEMIRYARDDTHYLLYIYDKV 455
>gi|456983567|gb|EMG19831.1| 3'-5' exonuclease [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 388
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|113676437|ref|NP_001038930.1| exonuclease 3'-5' domain-containing protein 1 [Danio rerio]
gi|123911622|sp|Q0P3U3.1|EXD1_DANRE RecName: Full=Exonuclease 3'-5' domain-containing protein 1;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 1
gi|112418997|gb|AAI22449.1| Zgc:154068 [Danio rerio]
Length = 378
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 47 GMDL-GVDGKVSLVSLALQNGKI-FIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGD 104
G D+ G G+ L L + K+ ++FD+ F L +LE+ ILKV+H
Sbjct: 140 GADVYGQSGQERLCWLQVATKKVVYLFDILLLGGPAFKNGLSMILENTHILKVLHDCRCI 199
Query: 105 AGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD---LVPHTIGLNDLLKFYKISPNN 161
L + F ++L NV+DTQ A L ++ D +P + L+ L +I P
Sbjct: 200 TRCLRTEFRVQLTNVFDTQVAELLLFFNESGGFLPDRPASLPELLQLHLRLTTAEIQPLC 259
Query: 162 FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
K Q RE +W RP D+L + V+
Sbjct: 260 SK---QQQSRECVQLWYVRPCPPDLLSLMCSSVQ 290
>gi|124808322|ref|XP_001348285.1| Pfprex [Plasmodium falciparum 3D7]
gi|23497176|gb|AAN36724.1| Pfprex [Plasmodium falciparum 3D7]
Length = 2016
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 41 VGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSC-PLIMFDGKLHEVLESDRILKVI 98
GLD+E L V D + L+ +A++N + I+D+++ + DG L +VLE+ I+K+I
Sbjct: 1467 CGLDIETTGLEVFDENIRLIQIAVENYPVIIYDMFNINKKDILDG-LRKVLENKNIIKII 1525
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKIS 158
DA LL N N +++N++DT A +LL ++ + LN++++ Y
Sbjct: 1526 QNGKFDAKFLLHN-NFKIENIFDTYIA--------SKLLDKNKNMYGFKLNNIVEKYL-- 1574
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
N+ ++ +W L ++ L YAA D
Sbjct: 1575 ------NVILDKQQQNSVWNNSLLNNNQLFYAARD 1603
>gi|418715523|ref|ZP_13275644.1| 3'-5' exonuclease [Leptospira interrogans str. UI 08452]
gi|418727334|ref|ZP_13285929.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12621]
gi|409959575|gb|EKO23345.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12621]
gi|410788424|gb|EKR82142.1| 3'-5' exonuclease [Leptospira interrogans str. UI 08452]
Length = 388
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLENLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWEKMKEE 172
>gi|387824213|ref|YP_005823684.1| Ribonuclease D [Francisella cf. novicida 3523]
gi|328675812|gb|AEB28487.1| Ribonuclease D [Francisella cf. novicida 3523]
Length = 364
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 35 ILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDR 93
I N S++ +D E + ++ LV +A +N +IF+ D + + F KL ++ E+
Sbjct: 16 ISNTSQIAVDTEFYWMRTYYPELCLVQIATEN-EIFLID--TLKDLDF-SKLKDIFENKD 71
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
I K+IH A D + FN + N++DTQ A L L L ++L
Sbjct: 72 IQKIIHSATNDIPIIKRFFNCEVNNIFDTQLAAAFLGFQTQSSLK-------TLLKEILD 124
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQ 212
+ F W+ RPLT L YA DVE L+ L KEY +Q
Sbjct: 125 IEMEKESQFSD------------WRNRPLTQKQLNYAIKDVEYLIQL-----KEYLQQQ 166
>gi|403344491|gb|EJY71591.1| hypothetical protein OXYTRI_07421 [Oxytricha trifallax]
Length = 967
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
KL + +I KV+HGA D L +F++ + N++DT A LQ
Sbjct: 348 KLLPLFTDPQITKVLHGADYDVEWLQKDFSLYVVNMFDTGQAARILQKP----------- 396
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
GL LL+ Y + K + + W+ RP+ +ML YA D LL ++
Sbjct: 397 -GFGLAFLLQSYCGVLTDKKYQLAD--------WRQRPIPEEMLKYAREDTHYLLYVYDL 447
Query: 204 MTKEY---ALKQN 213
M KE A+KQN
Sbjct: 448 MRKELIQNAVKQN 460
>gi|358339908|dbj|GAA47879.1| exosome complex exonuclease RRP6, partial [Clonorchis sinensis]
Length = 1125
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 7 PQNNLLRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMD----LGVDGKVSLVSLA 62
P+ + L + + + +A+A I ++ +DLE LG+ LV L+
Sbjct: 584 PEAHPLEPMGANYKFVDTLSALDAALAEISLHKEIAVDLEHHSHRSYLGI---TCLVQLS 640
Query: 63 LQNGKIFIFDVYSCPLIMFDG--KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVY 120
+ +I D L + D KL+ + ++KV HG+ D L +F+I + N++
Sbjct: 641 TRTTD-YILDA----LALRDHLHKLNVIFTDPDVVKVFHGSDLDLMWLQRDFSIYVVNLF 695
Query: 121 DTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTR 180
DT A ALQL L+ LL Y N K + + W+ R
Sbjct: 696 DTGLAARALQLG------------RFSLSFLLLRYANVRANKKYQLAD--------WRIR 735
Query: 181 PLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLD 218
PL +++ YA D LL + M +E Q+R LLD
Sbjct: 736 PLPDELIEYARTDTHYLLHVSAVMCQEL---QDRGLLD 770
>gi|351713711|gb|EHB16630.1| Exosome component 10 [Heterocephalus glaber]
Length = 882
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E L + I+KV HGA D L +F + + N++DT A L L H
Sbjct: 352 LNESLTNPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGR----------H 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL+ Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDYLLRLYCGVESNKQYQLAD--------WRIRPLPEEMLSYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|255075175|ref|XP_002501262.1| predicted protein [Micromonas sp. RCC299]
gi|226516526|gb|ACO62520.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V+ R++KV HGA D L +F I + ++DT A L+L
Sbjct: 100 LGPVMADPRVMKVFHGADMDVQWLQRDFGIYVVGMFDTGQAARVLELP------------ 147
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ GL LL Y + + + + W+ RPL+ +M+ YA D LL ++ R+
Sbjct: 148 SKGLAYLLDHYCSVKADKRFQLAD--------WRVRPLSEEMISYARGDTHHLLYVYDRL 199
Query: 205 TKE 207
++
Sbjct: 200 RQQ 202
>gi|224370825|ref|YP_002604989.1| Rnd [Desulfobacterium autotrophicum HRM2]
gi|223693542|gb|ACN16825.1| Rnd [Desulfobacterium autotrophicum HRM2]
Length = 377
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 38 ESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRIL 95
E ++ DLE + KV LV +A N F+ D PL + D L V E I
Sbjct: 23 EKRLAFDLEADSMHHFKEKVCLVQMADPNDS-FVVD----PLSIDDLSVLKPVFEDPAIT 77
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQ--CAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
KV HG+ D L +F+I + N++DT+ C F +Q R L+ L H
Sbjct: 78 KVFHGSDFDIRSLDRDFDIHVNNLFDTEIACRFLGIQ---KRSLAALLEKH--------- 125
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
F F+K W RPL+ +M+ Y+ DV LL L
Sbjct: 126 FDLTLDKRFQKT----------DWSRRPLSKEMIAYSVNDVAYLLEL 162
>gi|212545983|ref|XP_002153145.1| hypothetical protein PMAA_010410 [Talaromyces marneffei ATCC 18224]
gi|210064665|gb|EEA18760.1| hypothetical protein PMAA_010410 [Talaromyces marneffei ATCC 18224]
Length = 285
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQN-GKIFIFDVYSCP----LIMFDGK--LHEVLESDRIL 95
DLEG+ LG +G +S++S+ +Q ++++ DV++ LI D + L +LE+ I
Sbjct: 34 FDLEGVRLGRNGTISIISVFIQPLNQVYLIDVFTLSEKAFLITNDKQTSLKTILEAPSIP 93
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV D+ + S+ IRL+ V D Q A+ R SQ V GL ++ +
Sbjct: 94 KVFFDVRNDSDAMCSHHGIRLQCVKDLQVMELAV-----RFGSQKYV---AGLAKCIENH 145
Query: 156 KISP-------NNFKKNIQNLYRENP------HIWKTRPLTSDMLLYAAADV---ESLLA 199
P K ++ L+ +P ++ RP+ +D++ Y A DV SL
Sbjct: 146 ANLPPIELQKWKQIKASVGQLW--DPRRGGSYQVFNQRPIRTDIIQYCAQDVTILPSLWN 203
Query: 200 LFHRMTKE 207
++H+ ++
Sbjct: 204 VYHQKLRQ 211
>gi|116747862|ref|YP_844549.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
gi|116696926|gb|ABK16114.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
Length = 295
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L + E+ RI KV+H A D GL +F R ++DT A L
Sbjct: 67 LGRLFENPRIEKVLHAASNDVLGLRRDFQFRFNGLFDTAIACKLLGYK------------ 114
Query: 145 TIGLNDLLK-FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
+GL+ +L+ + +S N R + W RPL D L YA D L+AL H
Sbjct: 115 QLGLSKILETHFGVSLNK---------RWQRYDWGKRPLVPDQLDYARLDTHYLIALRHM 165
Query: 204 MTKE 207
+ +
Sbjct: 166 LAAD 169
>gi|302794642|ref|XP_002979085.1| hypothetical protein SELMODRAFT_110005 [Selaginella moellendorffii]
gi|300153403|gb|EFJ20042.1| hypothetical protein SELMODRAFT_110005 [Selaginella moellendorffii]
Length = 269
Score = 47.0 bits (110), Expect = 0.049, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 59/221 (26%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQ 370
+K Q +K FYFD+K++ +++KISE +R+ I + S + D N
Sbjct: 13 SKSLQVEHKLFYFDLKENPRGRYLKISE-KTTTSRSTIIVPESGIVWFLDLFNLYSNGDD 71
Query: 371 NTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQ----------LLPVGGK- 419
+S+ L DT+ ++ D+ +N R RF+ IS+ ++P G
Sbjct: 72 K-----------FESKELQMDTKVFYFDVGENPRGRFLKISEVSAASVRSTIIVPSGNDA 120
Query: 420 ---------------------LSSIA---------FPAQDLGPIIGLISDLQQEHS---C 446
LSSI Q PI D +
Sbjct: 121 DEGWVQFRHVLAEIHEASQMLLSSIENRQVSSQVLLKFQKSSPINAGFYDGPVRNGPTVA 180
Query: 447 PEDEDG---APEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
P D + +R K+FFF++ N +G ++RISE+
Sbjct: 181 PPSSDTSRMSSTARVLRAEQKKFFFDLGSNARGQYLRISEV 221
Score = 43.9 bits (102), Expect = 0.39, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQ 442
+ S+ L + + ++ DLK+N R R++ IS+ S+I P I DL
Sbjct: 11 LMSKSLQVEHKLFYFDLKENPRGRYLKISE--KTTTSRSTIIVPESG----IVWFLDLFN 64
Query: 443 EHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+S +D+ + E ++ + K F+F+V +N +G F++ISE+S S
Sbjct: 65 LYSNGDDKFESKE---LQMDTKVFYFDVGENPRGRFLKISEVSAAS 107
>gi|331005546|ref|ZP_08328920.1| Ribonuclease D [gamma proteobacterium IMCC1989]
gi|330420648|gb|EGG94940.1| Ribonuclease D [gamma proteobacterium IMCC1989]
Length = 383
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 56 VSLVSLALQNGKIFIFDVYSCPLIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
+ L+ +A +NG +++ D PL + D + + +VL++ I+KV+H D F +
Sbjct: 56 IGLLQIADENG-VYLID----PLAISDTQPMADVLQNPAIVKVVHACSEDLEVFQYAFGV 110
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
++++DTQ A +IG +LL+ +I K I +E
Sbjct: 111 LPESLFDTQVAAGFAGYG-----------SSIGYANLLR--EI------KRIDIPKQETR 151
Query: 175 HIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLL 216
W RPL+ L YAA DVE LL ++ + ++ +Q RLL
Sbjct: 152 SDWLQRPLSDAQLRYAALDVEYLLEIYRGLVEKLQ-QQQRLL 192
>gi|322417808|ref|YP_004197031.1| 3'-5' exonuclease [Geobacter sp. M18]
gi|320124195|gb|ADW11755.1| 3'-5' exonuclease [Geobacter sp. M18]
Length = 377
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 19 TNLITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCP 77
+L+TD + + + ES + DLE L KV L+ ++ ++ I P
Sbjct: 13 AHLVTDQKTLDELVERLSKESVLAFDLEADSLHHYTEKVCLIQVSSESENRLI-----DP 67
Query: 78 LIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
L D + L + + I K+ HGA D L +F I + N++DT A
Sbjct: 68 LAPIDVRVLAPIFANPAIKKIFHGADYDMRSLYRDFGIEVVNLFDTMIA----------- 116
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
SQ L GL LLK F + Y++ W RP + +ML YA D
Sbjct: 117 -SQFLGESEFGLAALLK------KRFGVELDKRYQKAD--WSKRPFSQEMLEYAMKDTSL 167
Query: 197 LLALFHRMTKEYALKQNRL 215
L+ L+ ++ E L + RL
Sbjct: 168 LIELYRQLEAEL-LAKGRL 185
>gi|348514838|ref|XP_003444947.1| PREDICTED: exosome component 10 [Oreochromis niloticus]
Length = 892
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%)
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA 125
G+ FI D M+ L+E I+KV HGA D L +F + + N++DT A
Sbjct: 335 GEDFIIDTLELRSEMY--ILNEAFTDPSIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQA 392
Query: 126 FTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSD 185
AL L+ H+ L+ LLK + ++ + + + W+ RPL +
Sbjct: 393 SRALNLAR----------HS--LDHLLKHFCSVDSDKRYQLAD--------WRVRPLPDE 432
Query: 186 MLLYAAADVESLLALF 201
M+ YA D LL ++
Sbjct: 433 MVQYARTDTHYLLYIY 448
>gi|398340441|ref|ZP_10525144.1| ribonuclease III [Leptospira kirschneri serovar Bim str. 1051]
gi|418693755|ref|ZP_13254804.1| 3'-5' exonuclease [Leptospira kirschneri str. H1]
gi|421106132|ref|ZP_15566708.1| 3'-5' exonuclease [Leptospira kirschneri str. H2]
gi|409958332|gb|EKO17224.1| 3'-5' exonuclease [Leptospira kirschneri str. H1]
gi|410008854|gb|EKO62514.1| 3'-5' exonuclease [Leptospira kirschneri str. H2]
Length = 388
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWAKMKEE 172
>gi|194768298|ref|XP_001966249.1| GF22830 [Drosophila ananassae]
gi|190618551|gb|EDV34075.1| GF22830 [Drosophila ananassae]
Length = 137
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRN----QIHISMSVVGHLRDHLNALL 366
TKM Q +K+FY D+KQ++ +FIK++EV+ TR QI + + RD L LL
Sbjct: 45 TKMLQIQSKRFYLDVKQNRRGRFIKVAEVSQTITRGGPRSQIALPAQGMIEFRDALTDLL 104
Query: 367 ---------TAHQNTPRHRYRDTHTIK 384
+ + T + R++ TH +K
Sbjct: 105 EEFGANDGGSVQKKTIKFRFKKTHFLK 131
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 392 TRRYFLDLKDNGRARFV---TISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEHSC 446
++R++LD+K N R RF+ +SQ + GG S IA PAQ + ++DL +E
Sbjct: 52 SKRFYLDVKQNRRGRFIKVAEVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGA 109
>gi|418679035|ref|ZP_13240300.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|418685440|ref|ZP_13246616.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418740873|ref|ZP_13297249.1| 3'-5' exonuclease [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421089663|ref|ZP_15550467.1| 3'-5' exonuclease [Leptospira kirschneri str. 200802841]
gi|421131604|ref|ZP_15591784.1| 3'-5' exonuclease [Leptospira kirschneri str. 2008720114]
gi|400320450|gb|EJO68319.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|410001487|gb|EKO52083.1| 3'-5' exonuclease [Leptospira kirschneri str. 200802841]
gi|410356978|gb|EKP04263.1| 3'-5' exonuclease [Leptospira kirschneri str. 2008720114]
gi|410740048|gb|EKQ84770.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410751468|gb|EKR08445.1| 3'-5' exonuclease [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 388
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL L YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQLQYAALDTVYLETIWAKMKEE 172
>gi|393245591|gb|EJD53101.1| hypothetical protein AURDEDRAFT_180678 [Auricularia delicata
TFB-10046 SS5]
Length = 365
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 43 LDLEGMDLG-VDGKVSLVSLAL-QNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
LD EG LG V G +SL++++ +G +++ D + L E+ + I KV+
Sbjct: 59 LDCEGYQLGAVGGSMSLINVSCGPDGVVYVVDATCFERDALE-PLFELFRNPEIKKVMFD 117
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCA---FTALQLSDPR---------LLSQDLVPHTIGL 148
DA + +NI L+ V D Q A ++ PR + +D++ H
Sbjct: 118 GRMDASEFMHGYNIELEGVLDMQLADITGRYMRGEGPREQLARLRPFIHPRDMIGHE--- 174
Query: 149 NDLLKFYKISPNNFKKNIQNL----YRENPHI---WKTRPLTSDMLLYAAADVESLLALF 201
+D L +++ N K ++ R N W+ RPL + MLL AA DV + L+
Sbjct: 175 SDYLGVHRL--NGLVKCMEEFRLPVVRRNEAYHNRWQERPLPNAMLLAAARDVCYIRTLW 232
Query: 202 HRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQ---FRQNQLRRWRKDLMSSKRP 258
+ Q L + Y L + P R Q L WR ++ P
Sbjct: 233 EHFISRGWVSQGELEAQSARYVALVRGMRPYQWDSYRCNGLLPQGILADWRGGPNETQAP 292
Query: 259 Y 259
+
Sbjct: 293 W 293
>gi|302807740|ref|XP_002985564.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
gi|300146770|gb|EFJ13438.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
Length = 442
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 24 DVQEAQSAMATILNESKVGLDLEGMDLGVDG---KVSLVSLAL-------QNGKIFIFDV 73
D + Q + + S + LD E + V G +VSL+ +A ++ +FI DV
Sbjct: 22 DGEAFQGFLLALQESSVIALDAEWKPVLVAGMHPRVSLLQIACRKRDFGPESDLVFIVDV 81
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGD----AGGLLSNFNIRLKNVYDTQCAFTAL 129
S P L E LE+ RILK+ D A L S + + D + +
Sbjct: 82 LSIPASALLQPLEEALETSRILKLGFKLRQDLINLAASLSSTASFSCEPYIDIGKLYHEV 141
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
+ +PR L D T L+ + + + K++Q W+ RPLT + + Y
Sbjct: 142 KRKNPRKLPGD----TPSLSHICR--DVFGRPLCKSLQC------SDWELRPLTEEQISY 189
Query: 190 AAADVESLLALF 201
AAAD LLA+
Sbjct: 190 AAADAHCLLAIL 201
>gi|403418903|emb|CCM05603.1| predicted protein [Fibroporia radiculosa]
Length = 751
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EVL I+KV+HGA D L +FN+ + N++DT A L+ PR H
Sbjct: 204 LNEVLTDPAIVKVLHGAESDIIWLQQDFNLYIVNLFDTYHASKILEF--PR--------H 253
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
++ LL+ Y +F + + + W+ RPL +ML YA +D LL ++
Sbjct: 254 SLAT--LLEMY----CDFTADKRYQLAD----WRIRPLPEEMLAYARSDTHFLLFIY 300
>gi|355714575|gb|AES05049.1| purine-rich element binding protein G [Mustela putorius furo]
Length = 96
Score = 46.6 bits (109), Expect = 0.056, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 418 GKLSSIAFPAQDL----GPIIGLISD-----LQQEHSCPEDEDGAPEGNYMRCNNKRFFF 468
G+ +I PAQ + ++ LI D +++ +D PEG R +NKRF+F
Sbjct: 21 GQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYF 80
Query: 469 NVSKNGKGTFMRISEI 484
+V N G F+++SE+
Sbjct: 81 DVGSNKYGIFLKVSEV 96
>gi|86158027|ref|YP_464812.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774538|gb|ABC81375.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
Length = 294
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L E+L R + V+HGA D L + R+ ++DT A A +L P L
Sbjct: 75 LGEILCDGREV-VLHGADYDVRCLHREYGWRIPRLFDTMIA--ARRLGRPGL-------- 123
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
GL+ L++ ++F + ++ + W RPLT D L YAA D LL LF +
Sbjct: 124 --GLSALVE------SHFGVRLSKAFQRS--DWGRRPLTPDQLAYAALDTHFLLPLFDLL 173
Query: 205 TKEYALK 211
T E A +
Sbjct: 174 TGELAAR 180
>gi|388491958|gb|AFK34045.1| unknown [Medicago truncatula]
Length = 217
Score = 46.6 bits (109), Expect = 0.058, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 31 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYVNS--- 86
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
+ + S+ L DT+ ++ D+ +N R RF+ +S+ V S+I PA
Sbjct: 87 -------EDQELFSKELQLDTKVFYFDIGENRRGRFLKVSE-ASVSRNRSTIIVPA 134
>gi|383761955|ref|YP_005440937.1| ribonuclease D [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382223|dbj|BAL99039.1| ribonuclease D [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 395
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLA-LQNGKIFIFDVYSCPLIMFD-GKLHEVLESDR 93
+ + LD E L GKV L+ ++ GK I D PL + D L E+L
Sbjct: 27 GQPRFALDTESNSLYSYQGKVCLIQISTYATGKEEILDFLVDPLRLKDLSPLGELLVDPA 86
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL- 152
I V+H A D L ++ R V+DTQ A R+L +GL +L
Sbjct: 87 IEVVMHAADNDILMLYRSYGFRFGRVFDTQLAA--------RILGW----KQVGLAAILE 134
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
K + I N K +Q W RPLT + + YA D LL L R+ +E
Sbjct: 135 KHFGIVSN---KRMQR------TDWGKRPLTPEQIAYAQMDTHYLLPLRDRLAEE 180
>gi|453081050|gb|EMF09100.1| 3_5_exonuc-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 782
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 30/194 (15%)
Query: 19 TNLITDVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSC 76
T + D +EA S M L ++K + +DLE D G VSL+ ++ ++ K +I D
Sbjct: 216 TATLVDTEEALSEMLEELKQAKEIAIDLEHHDSRSYIGIVSLMQISTRD-KDWIVDT--- 271
Query: 77 PLIMFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
L + KL EV I+KV+HGAF D L + + + ++DT A + L +
Sbjct: 272 -LKPWRRKLQCLNEVFADPGIIKVLHGAFMDIMWLQRDLGLYIVGLFDTFHAASVLGYT- 329
Query: 134 PRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
L LLK K + + +K Q W+ RPL +++ YA +D
Sbjct: 330 -----------GRSLAFLLK--KFANVDAQKQYQTA------DWRVRPLPTELFDYARSD 370
Query: 194 VESLLALFHRMTKE 207
LL +F M E
Sbjct: 371 THFLLYIFDNMRNE 384
>gi|253698875|ref|YP_003020064.1| 3'-5' exonuclease [Geobacter sp. M21]
gi|251773725|gb|ACT16306.1| 3'-5' exonuclease [Geobacter sp. M21]
Length = 377
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 19 TNLITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCP 77
+L+TD + + + ES + DLE L KV L+ ++ + I P
Sbjct: 13 AHLVTDQKTLDELVERLSRESVLAFDLEADSLHHYTEKVCLIQVSSASEDRLI-----DP 67
Query: 78 LIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
L D K L + + I K+ HGA D L +F I + N++DT A
Sbjct: 68 LAPIDVKVLAPIFANPAIKKIFHGADYDMRSLYRDFGIEVVNLFDTMIA----------- 116
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
SQ L GL LLK F + Y++ W RP + +ML YA D
Sbjct: 117 -SQFLGESEFGLAALLK------KRFGVELDKRYQKAD--WSKRPFSQEMLDYAMKDTSL 167
Query: 197 LLALFHRMTKEYALKQ 212
L+ L+ ++ E LKQ
Sbjct: 168 LIELYRQLEAE--LKQ 181
>gi|256073603|ref|XP_002573119.1| polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]
gi|353232486|emb|CCD79841.1| polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]
Length = 830
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +I+KV HG+ D L +F + + N++DT A LQ
Sbjct: 278 LNEVFTDPKIVKVFHGSDSDLMWLQRDFGVYVVNLFDTGIAARLLQYG------------ 325
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L+ LL+ + N K + + W+ RPL ++++ YA +D LL + RM
Sbjct: 326 RFSLSYLLQRFVGIYANKKYQLAD--------WRIRPLPNELIEYARSDTHYLLHIASRM 377
Query: 205 TKEYALKQNRLLL 217
+E Q+R LL
Sbjct: 378 CREL---QDRDLL 387
>gi|339717675|pdb|3SAH|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
Y436a Mutation In The Catalytic Site
gi|339717676|pdb|3SAH|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
Y436a Mutation In The Catalytic Site
Length = 428
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + I+ + E +LN + +DLE G L+ ++ +
Sbjct: 97 PQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 156
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
FI D M+ L+E L I+KV HGA D L +F + + N++DT
Sbjct: 157 TED-FIIDTLELRSDMY--ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 213
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 214 AARLLNLGR----------HS--LDHLLKLYCNVDSNKQYQLAD--------WRIRPLPE 253
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML A D LL ++ +M E
Sbjct: 254 EMLSAARDDTHYLLYIYDKMRLE 276
>gi|367017047|ref|XP_003683022.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
gi|359750685|emb|CCE93811.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
Length = 735
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 21/131 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + +ILKV HGAF D L + + + +++DT A A+ L PR H
Sbjct: 275 LNEVFANPKILKVFHGAFMDIIWLQRDLGLYVVSLFDTFHASRAIGL--PR--------H 324
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++ ++
Sbjct: 325 SLAY--LLEKFA----NFKTSKKYQLAD----WRLRPLSKAMNAYARADTHFLLNIYDQL 374
Query: 205 TKEYALKQNRL 215
+ ++QN+L
Sbjct: 375 -RNTLIEQNKL 384
>gi|339235707|ref|XP_003379408.1| putative WAP-type 'four-disulfide core' [Trichinella spiralis]
gi|316977941|gb|EFV60978.1| putative WAP-type 'four-disulfide core' [Trichinella spiralis]
Length = 948
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 21/89 (23%)
Query: 56 VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV------------------ 97
++L+++ NG+IF+FDV I+ + L ++LESD LKV
Sbjct: 664 LTLITICTPNGRIFVFDVEYTASILLECGLKDILESDEYLKVCLVYYYYYYKSNLFIRYP 723
Query: 98 ---IHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+HG+ A L ++ IRL V+DTQ
Sbjct: 724 LQIVHGSKRAARLLWQHYKIRLWEVFDTQ 752
>gi|197116637|ref|YP_002137064.1| ribonuclease D [Geobacter bemidjiensis Bem]
gi|197085997|gb|ACH37268.1| ribonuclease D, putative [Geobacter bemidjiensis Bem]
Length = 377
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 19 TNLITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCP 77
+L+TD + + + ES + DLE L KV L+ ++ + I P
Sbjct: 13 AHLVTDQKTLDELVERLSRESVLAFDLEADSLHHYTEKVCLIQVSSTSEDRLI-----DP 67
Query: 78 LIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
L D K L + + I K+ HGA D L +F I + N++DT A
Sbjct: 68 LAPIDVKVLAPIFANPAIKKIFHGADYDMRSLYRDFGIEVVNLFDTMIA----------- 116
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
SQ L GL LLK F + Y++ W RP + +ML YA D
Sbjct: 117 -SQFLGESEFGLAALLK------KRFGVELDKRYQKAD--WSKRPFSQEMLDYAMKDTSL 167
Query: 197 LLALFHRMTKEYALKQ 212
L+ L+ ++ E LKQ
Sbjct: 168 LIELYRQLEAE--LKQ 181
>gi|219118334|ref|XP_002179944.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408997|gb|EEC48930.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 700
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 27/176 (15%)
Query: 58 LVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFG-DAGGLLSNFNIRL 116
L+ L+ +G ++ D + + G L + I+KV H G D L +F I +
Sbjct: 276 LLQLSTDHGMAYVIDPLAPGVFEEVGGLAPIFADPDIVKVGHSIGGLDVRSLHRDFGIFV 335
Query: 117 KNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI 176
N +DT A L L + GL + + Y + + K+++N Y+
Sbjct: 336 INAFDTYEAAKVLCL------------ESHGLAAVCEHYGMKYTDLYKSLKNEYQTCD-- 381
Query: 177 WKTRPLTSDMLLYAAADVESLLAL----FHRMTKEY--------ALKQNRLLLDNL 220
W+ RPLT M+ Y DV L+ L +TK Y L ++R++ D L
Sbjct: 382 WRARPLTGPMIQYGRFDVHFLIELRMLMIRDLTKTYLFEIKPAEELHESRMVADTL 437
>gi|213510932|ref|NP_001133834.1| Exosome component 10 [Salmo salar]
gi|209155512|gb|ACI33988.1| Exosome component 10 [Salmo salar]
Length = 885
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L + + + N++DT A L L H
Sbjct: 351 LNEAFTDPAIVKVFHGADSDIEWLQKDLGLYIVNMFDTHQASRTLNLGR----------H 400
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK + N+ + R W+ RPL +M YA AD LL ++ R+
Sbjct: 401 S--LDHLLKLF--------CNVDSDKRYQLADWRIRPLPDEMFQYARADTHYLLYVYDRL 450
>gi|145548742|ref|XP_001460051.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427879|emb|CAK92654.1| unnamed protein product [Paramecium tetraurelia]
Length = 676
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 39 SKVGLDLE-GMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESD-RILK 96
S++ +DLE + G L+ L+ + + +I D + PL G + V+ ++ +I+K
Sbjct: 218 SEIAVDLEHNHQISYLGITCLIQLSTR-SQDYIIDPF--PLWKQLGDMLSVIFANPKIVK 274
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
V HGA D L +F + + N++DT A LQL + + +F
Sbjct: 275 VFHGAENDVQWLQRDFGLYIVNLFDTFHASKELQL----------------MQNSFQF-- 316
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ KK+ Y+ W RPL +M+ YA D LL ++ RM ++
Sbjct: 317 LLSEYCKKSTDKTYQTAD--WTQRPLPDEMIKYAQIDTHYLLYIYDRMRQD 365
>gi|152978783|ref|YP_001344412.1| ribonuclease D [Actinobacillus succinogenes 130Z]
gi|150840506|gb|ABR74477.1| ribonuclease D [Actinobacillus succinogenes 130Z]
Length = 383
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 85/210 (40%), Gaps = 46/210 (21%)
Query: 7 PQNNLLRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQN 65
PQ NL+ T + L T ++AQ +S V LD E + + K+ L+ L
Sbjct: 9 PQFNLITT---NSGLKTVCEQAQ-------QKSAVALDTEFIRIRSYYPKLGLIQL-YDG 57
Query: 66 GKIFIFDVYSCPLIMFDGKLHEVLESD-RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ- 123
++ + D P + D L +D ++KV+H + D F + + DTQ
Sbjct: 58 ERVSLID----PTTITDFSPFTALLADINVIKVLHACYEDLEVFSHYFQQLPEPIMDTQV 113
Query: 124 -CAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNLYRENPHIWKT 179
F A PH+ GL L++ Y +I + + W
Sbjct: 114 MAGFLAF-------------PHSTGLASLIRHYLALEIDKGASRTD-----------WLA 149
Query: 180 RPLTSDMLLYAAADVESLLALFHRMTKEYA 209
RPL+ L YAAADV LL L+ +M E A
Sbjct: 150 RPLSEKQLQYAAADVWYLLPLYEKMAVELA 179
>gi|449452640|ref|XP_004144067.1| PREDICTED: transcription factor Pur-alpha 1-like [Cucumis sativus]
Length = 309
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 302 NEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDH 361
N + EV +K Q K FYFDI +++ +F+K++ + + R+ I + G RD
Sbjct: 93 NSDDPEVF-SKELQLDTKVFYFDIGENRRGRFLKVNCFSFSRNRSTIIVP---AGSNRDE 148
Query: 362 LNALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGR--ARFVTISQLLPVGGK 419
+A +N R I +E+ + +R + L ++N R +S + G
Sbjct: 149 G---WSAFRNILAFR-----NILAEI-NEASRLFILPNQENSEHSERLAGLSDDVGAG-- 197
Query: 420 LSSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFM 479
I+ + GP L D Q + S ++ +R + KRFFF++ N +G F+
Sbjct: 198 --FISGHSSQSGPTSDLNVDRQVDLSAQDEMGNLGVSKVIRADQKRFFFDLGSNNRGHFL 255
Query: 480 RISEISTPSK 489
RISE++ +
Sbjct: 256 RISEVAGADR 265
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 39 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGIPWFLDLFNYYINS--- 94
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
D + S+ L DT+ ++ D+ +N R RF+ +
Sbjct: 95 -------DDPEVFSKELQLDTKVFYFDIGENRRGRFLKV 126
>gi|449268441|gb|EMC79305.1| Exosome component 10, partial [Columba livia]
Length = 829
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV+HGA D L +F + L N++DT A RLL +L H
Sbjct: 317 LNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAA--------RLL--NLGRH 366
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + Q + W+ RPL +M+ YA D LL ++ ++
Sbjct: 367 S--LDHLLKLY----CNIDADKQYQLAD----WRIRPLPEEMIQYARDDTHYLLYIYDKV 416
>gi|169234702|ref|NP_001108472.1| PM-Scl autoantigen-like protein [Bombyx mori]
gi|18700467|dbj|BAB85201.1| PM-Scl autoantigen-like protein [Bombyx mori]
gi|22474519|dbj|BAC10623.1| PM-Scl autoantigen-like protein [Bombyx mori]
Length = 451
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 48/229 (20%)
Query: 44 DLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFG 103
DL G+ L + G L+ ++ G FI D + + KL+ V + LKV HGA
Sbjct: 152 DLSGLYL-ILGITCLIQISTDEGGDFIIDALAVREHIH--KLNVVFTDPKKLKVFHGADS 208
Query: 104 DAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFK 163
D L +F + L ++DT A +L L P L + L+ G+ D K Y+++
Sbjct: 209 DVLWLQRDFGVYLVGLFDTYHAAKSLGL--PALSLKFLLMKYCGV-DTDKTYRLAD---- 261
Query: 164 KNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALK---QNRLLLDNL 220
W+ RPL ++ YA D LL ++ M + K Q +LL
Sbjct: 262 -------------WRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLS-- 306
Query: 221 IYE-------TLFNHVV-------PLNIRKRRQFRQNQ------LRRWR 249
++E + +N V PL IR ++ F Q L +WR
Sbjct: 307 VFEDSRQTCASTYNKEVIHDESHIPLYIRSKKNFDNQQMAALKMLYKWR 355
>gi|413950403|gb|AFW83052.1| hypothetical protein ZEAMMB73_414768 [Zea mays]
Length = 235
Score = 46.2 bits (108), Expect = 0.081, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 107 GLLSNFNIRLKNVYDTQCAFTALQLSD---PRLLSQDLVPHTIGLNDLLKFYK----ISP 159
L F I+L NV DTQ A++ ++ + ++ S D + I LL + + P
Sbjct: 13 ALYFQFGIKLHNVMDTQIAYSLIEEQEQEGKKMTSDDY--NYISFVSLLADKRYCGILYP 70
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYA 209
K+ ++ L R++P+ W RPL+ M+ A DV LL+++ +M ++ +
Sbjct: 71 E--KEEVRTLLRQDPNFWTIRPLSDMMVRAATDDVRFLLSIYAKMMEKLS 118
>gi|270007326|gb|EFA03774.1| hypothetical protein TcasGA2_TC013885 [Tribolium castaneum]
Length = 890
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + I+K+ HGA D L + ++ + N++DT A ALQ
Sbjct: 320 LNEVFTKNTIVKIFHGADKDIEWLQRDLSLYVVNMFDTHQAAKALQYP------------ 367
Query: 145 TIGLNDLL-KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
+ L L+ KF ++PN K Q W+ RPL ++ YA D L+ ++
Sbjct: 368 ALSLAFLMKKFCNVTPN---KQFQLA------DWRIRPLPDELKSYAREDTHYLIYIYKM 418
Query: 204 MTKEYALKQNR 214
M +E K N+
Sbjct: 419 MKRELLHKTNK 429
>gi|242218119|ref|XP_002474853.1| predicted protein [Postia placenta Mad-698-R]
gi|220725980|gb|EED79945.1| predicted protein [Postia placenta Mad-698-R]
Length = 882
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +I+KV+HGA D L +FN+ + N++DT A L PR H
Sbjct: 311 LNEVFTDSQIVKVLHGAESDIVWLQQDFNLYIVNLFDTYHASKVLDF--PR--------H 360
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
+ L LL+ Y +F + + + W+ RPL +ML YA +D LL ++
Sbjct: 361 S--LATLLEMY----CDFTADKRYQLAD----WRIRPLPEEMLAYARSDTHFLLYIY 407
>gi|212528170|ref|XP_002144242.1| exosome component 3'-5' exonuclease [Talaromyces marneffei ATCC
18224]
gi|210073640|gb|EEA27727.1| exosome complex exonuclease Rrp6, putative [Talaromyces marneffei
ATCC 18224]
Length = 795
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 24 DVQEAQSAMATILNES-KVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLIMF 81
D E + M L ++ ++ +DLE D+ G VSL+ ++ ++ K ++ D P
Sbjct: 232 DTPEGVAEMVKELKKANEIAVDLEHHDMHTYYGLVSLMQISTRD-KDWVVDTLQ-PWRED 289
Query: 82 DGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
+L+EV ILKV HG+ D L + + + ++DT A AL P+
Sbjct: 290 LQQLNEVFADPNILKVFHGSTMDIVWLQRDLGLYVVGLFDTYHAAVALGF--PKR----- 342
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y + K + + W+ RPLT +ML YA AD LL ++
Sbjct: 343 -----SLKFLLEKYARYEADKKYQMAD--------WRLRPLTEEMLRYARADTHYLLYIY 389
>gi|390603116|gb|EIN12508.1| hypothetical protein PUNSTDRAFT_97267 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 870
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 20/121 (16%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
+L+EV RI+KV HGA D L +FN+ + ++DT A L PR
Sbjct: 318 ELNEVFTDPRIVKVFHGAESDIQWLQQDFNVFVVGLFDTFHASKVLHF--PR-------- 367
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
H GL LL+ Y +F + + + W+ RPL +ML YA +D LL ++
Sbjct: 368 H--GLASLLEMY----CDFIADKRYQLAD----WRIRPLPQEMLDYARSDTHYLLYIYDH 417
Query: 204 M 204
+
Sbjct: 418 L 418
>gi|307204165|gb|EFN83006.1| Exonuclease 3'-5' domain-like-containing protein 2 [Harpegnathos
saltator]
Length = 643
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 36 LNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
L+E +G D E ++ +G VSL+ LA NG +F + I KL E+L + RIL
Sbjct: 111 LSEGVLGFDCEWVN---EGPVSLLQLATFNGVCALFRIGKIGYI--PDKLKELLSNKRIL 165
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV +F D +L + ++ D + ++QL + L+ + + +GL ++ K
Sbjct: 166 KVGVASFEDGQKILKDHGCQVSGTLDIRTLAESIQLPSLKSLAAMSLEY-LGL-EMDKII 223
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRL 215
++ + W+ LT + + YAA D + + ++ ++ + Q+++
Sbjct: 224 ELRCGD---------------WEASTLTDEQVTYAACDAIASIFIYQKVKQ----MQSKI 264
Query: 216 LLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRK 250
+ + I + + L I ++ + + +L WRK
Sbjct: 265 IFFSFICTYIIIANLFLQIMQKMRKAKQKLTLWRK 299
>gi|326477901|gb|EGE01911.1| exosome complex exonuclease Rrp6 [Trichophyton equinum CBS 127.97]
Length = 824
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 29/143 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HG+ D L + + L ++DT A +ALQL P+ + L+
Sbjct: 308 LNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQL--PKKSLKFLLHE 365
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+G D K Y+ + W+ RPL + ML YA +D LL +F R+
Sbjct: 366 YVGF-DADKQYQTA-----------------DWRIRPLLAGMLDYARSDTHFLLYIFDRL 407
Query: 205 TKEYALKQNRLLLDNLIYETLFN 227
+N+LL +L E+ F
Sbjct: 408 -------RNQLL--DLPSESGFG 421
>gi|339252698|ref|XP_003371572.1| exosome component 10 [Trichinella spiralis]
gi|316968157|gb|EFV52483.1| exosome component 10 [Trichinella spiralis]
Length = 827
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV+HG+ D L +F I + N++DT A L++ P+ + LV
Sbjct: 317 LNEPFVDPNIVKVMHGSSQDIQWLQRDFGIYVVNLFDTYHAMEVLEM--PQRSLKFLVKE 374
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
+G+N L K Y+ + W+ RPL S ML YA +D LL +
Sbjct: 375 LVGVN-LDKSYQTAD-----------------WRIRPLGSKMLAYARSDSHYLLYCW 413
>gi|221060476|ref|XP_002260883.1| POM1 homolog [Plasmodium knowlesi strain H]
gi|193810957|emb|CAQ42855.1| POM1 homolog, putative [Plasmodium knowlesi strain H]
Length = 1861
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 37 NESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N + GLD+E L V D K+ L+ +A++N + I+D+++ L E+L++++++
Sbjct: 1308 NVTHCGLDIETTGLEVFDEKIRLIQIAVENYPVIIYDMFNITKESILTGLREILKNEKVV 1367
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
K+I DA L+ N N ++ N++DT A +LL ++ + LN++++ Y
Sbjct: 1368 KIIQNGKFDAKFLMHN-NFQVDNIFDTYIA--------SKLLDKNKNMYGFKLNNIVEKY 1418
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
N+ ++ +W L ++ L YAA D
Sbjct: 1419 L--------NVTLDKQQQNSVWNNSLLNNNQLFYAARD 1448
>gi|66357594|ref|XP_625975.1| RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD
domain and an HRDc domain [Cryptosporidium parvum Iowa
II]
gi|46227246|gb|EAK88196.1| RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD
domain and an HRDc domain [Cryptosporidium parvum Iowa
II]
Length = 957
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 22 ITDVQEAQSAMATILNESK---VGLDLEGM-DLGVDGKVSLVSLALQNGKIFIFDVYSCP 77
I ++ E+ + +++ ES + +D+E + G VSL+ L+ + +I D P
Sbjct: 282 ILNLMESHYSQSSMNEESSPFLLAIDVEHHSNQSYKGFVSLIQLSTRTHD-YIID----P 336
Query: 78 LIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
+F+ L+E+ + +ILKV+HG+ D L +F++ + N++DT A R
Sbjct: 337 FNLFNEIQMLNELTANPKILKVLHGSDYDIIWLQRDFSVYIVNMFDTGQA--------AR 388
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
+L+ P L +LL Y + K Q W+ RPL+++++ YA D
Sbjct: 389 ILN---TPGGYSLKNLLSIY--CSLDIDKRFQ------LADWRERPLSNELIEYARGDTH 437
Query: 196 SLLALFHRM 204
LL ++ M
Sbjct: 438 YLLYIYDIM 446
>gi|417767687|ref|ZP_12415623.1| 3'-5' exonuclease [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349705|gb|EJP01993.1| 3'-5' exonuclease [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 388
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 32/158 (20%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNF 112
KV L+ ++ + GK +I D PL + + L + E +ILK+ H A D L +F
Sbjct: 43 SKVCLIQISAK-GKNYIID----PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDF 97
Query: 113 NIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY---KISPNNFKKNIQNL 169
+ +N+ DT F++ RLL + L L+ +Y K+S K N
Sbjct: 98 GFQFQNIADT--GFSS------RLLDHE----QYSLTYLVDYYHKIKLSKKEQKSN---- 141
Query: 170 YRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL YAA D L ++ +M +E
Sbjct: 142 -------WEKRPLEKSQFQYAALDTVYLETIWEKMKEE 172
>gi|95928412|ref|ZP_01311160.1| 3'-5' exonuclease [Desulfuromonas acetoxidans DSM 684]
gi|95135683|gb|EAT17334.1| 3'-5' exonuclease [Desulfuromonas acetoxidans DSM 684]
Length = 374
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 77 PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
PL D L VL I K+ H A D L +F+I ++ ++DT A
Sbjct: 58 PLAAGDLAPLKPVLADSSIRKIFHAADYDIRCLARDFDIEIRGLFDTMIA---------- 107
Query: 136 LLSQDLVPHTIGLNDLL-KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD- 193
SQ L +GL D+L K++ ++ K Q R + W RPL+ +M YAA D
Sbjct: 108 --SQFLGEEKVGLADVLGKYFDVT---LDKRFQ---RAD---WSKRPLSPEMCHYAAEDT 156
Query: 194 --VESLLALFHRMTKE 207
+E L+A+ KE
Sbjct: 157 RHLEKLVAILEPALKE 172
>gi|345564419|gb|EGX47382.1| hypothetical protein AOL_s00083g475 [Arthrobotrys oligospora ATCC
24927]
Length = 806
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + I+KV HGAF D L + NI + ++DT A +L + H
Sbjct: 292 LNEVFANPGIVKVFHGAFMDIIWLQRDLNIYVVGLFDTYDAARSLGFTG----------H 341
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LLK Y NF + + W+ RP+ +ML YA +D LL ++ M
Sbjct: 342 SLAF--LLKKYI----NFDADKSYQLAD----WRVRPIPQEMLDYARSDTHFLLFIYDNM 391
Query: 205 TKEYALKQN 213
E K N
Sbjct: 392 RNELIGKSN 400
>gi|404498237|ref|YP_006722343.1| ribonuclease D [Geobacter metallireducens GS-15]
gi|418065969|ref|ZP_12703338.1| 3'-5' exonuclease [Geobacter metallireducens RCH3]
gi|78195834|gb|ABB33601.1| ribonuclease D, putative [Geobacter metallireducens GS-15]
gi|373561476|gb|EHP87711.1| 3'-5' exonuclease [Geobacter metallireducens RCH3]
Length = 382
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 21/132 (15%)
Query: 77 PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
PL + D L V + I KV HGA D L +F I + N++DT A
Sbjct: 62 PLAVADLAPLAPVFANPSIRKVFHGADYDIRSLHRDFGIEVNNLFDTMIA---------- 111
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
Q L GL +L+ F + Y+ W RPLT+ M+ YAA D
Sbjct: 112 --CQFLGEREFGLAAVLR------KRFGVELDKQYQRAD--WSRRPLTAGMIEYAAKDTT 161
Query: 196 SLLALFHRMTKE 207
L+ L R+ E
Sbjct: 162 LLIELCGRLEAE 173
>gi|67593930|ref|XP_665760.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656583|gb|EAL35530.1| hypothetical protein Chro.50386, partial [Cryptosporidium hominis]
Length = 875
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 22 ITDVQEAQSAMATILNESK---VGLDLEGM-DLGVDGKVSLVSLALQNGKIFIFDVYSCP 77
I ++ E+ + +++ ES + +D+E + G VSL+ L+ + +I D P
Sbjct: 282 ILNLMESHYSQSSMNEESSPFLLAIDVEHHSNQSYKGFVSLIQLSTRTHD-YIID----P 336
Query: 78 LIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
+F+ L+E+ + +ILKV+HG+ D L +F++ + N++DT A R
Sbjct: 337 FNLFNEIQMLNELTANPKILKVLHGSDYDIIWLQRDFSVYIVNMFDTGQA--------AR 388
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
+L+ P L +LL Y + K Q W+ RPL+++++ YA D
Sbjct: 389 ILN---TPGGYSLKNLLSIY--CSLDIDKRFQ------LADWRERPLSNELIEYARGDTH 437
Query: 196 SLLALFHRM 204
LL ++ M
Sbjct: 438 YLLYIYDIM 446
>gi|260790959|ref|XP_002590508.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
gi|229275702|gb|EEN46519.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
Length = 832
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L++ +++KV HGA D L +F + + N++DT A L L PR H
Sbjct: 337 LNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGL--PR--------H 386
Query: 145 TIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
++ LLK Y + P+ K + + W+ RPL S+M YA D LL ++
Sbjct: 387 SLAY--LLKTYCDVEPDK-KYQLAD--------WRIRPLPSEMTQYAREDTHYLLHIYDC 435
Query: 204 MTKEYALKQNRLLLDNLIYETL 225
M E + N NL++ TL
Sbjct: 436 MRSELLDRGNNEA--NLLHNTL 455
>gi|149695529|ref|XP_001492550.1| PREDICTED: exosome component 10 isoform 1 [Equus caballus]
Length = 886
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 7 PQNNLLRTLMN-RTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQ 64
PQ L R + + ++ + E +LN + +DLE G L+ ++ +
Sbjct: 275 PQPQLYRPVAETPCHFVSSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTR 334
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
+ FI D M+ L+E I+KV HGA D L +F + + N++DT
Sbjct: 335 R-EDFIVDTLELRSDMY--ILNESFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQ 391
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A RLL +L H+ L+ LLK Y +N + + + W+ RPL
Sbjct: 392 AA--------RLL--NLGRHS--LDHLLKRYCSVESNKQYQLAD--------WRIRPLPE 431
Query: 185 DMLLYAAADVESLLALFHRMTKE 207
+ML YA D LL ++ +M E
Sbjct: 432 EMLNYARDDTHYLLYIYDKMRLE 454
>gi|338722160|ref|XP_003364495.1| PREDICTED: exosome component 10 isoform 2 [Equus caballus]
Length = 861
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 352 LNESFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 401
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y +N + + + W+ RPL +ML YA D LL ++ +M
Sbjct: 402 S--LDHLLKRYCSVESNKQYQLAD--------WRIRPLPEEMLNYARDDTHYLLYIYDKM 451
Query: 205 TKE 207
E
Sbjct: 452 RLE 454
>gi|290982318|ref|XP_002673877.1| 3'-5' exonuclease and HRDC domain-containing protein [Naegleria
gruberi]
gi|284087464|gb|EFC41133.1| 3'-5' exonuclease and HRDC domain-containing protein [Naegleria
gruberi]
Length = 956
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 20/115 (17%)
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL 152
+I+KV+HG+ D L +F I N++DT A L L P L+ H G+ D
Sbjct: 414 KIVKVMHGSDCDILWLQRDFAIYCVNLFDTGQACRTLAL--PGCSLAYLLKHYCGI-DAD 470
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
K Y+++ W+ RPL S+M+ YA D LL ++ R+ ++
Sbjct: 471 KKYQLA-----------------DWRVRPLPSEMVKYAREDTHYLLYIYDRLRQD 508
>gi|189237006|ref|XP_966807.2| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 947
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + I+K+ HGA D L + ++ + N++DT A ALQ
Sbjct: 320 LNEVFTKNTIVKIFHGADKDIEWLQRDLSLYVVNMFDTHQAAKALQYP------------ 367
Query: 145 TIGLNDLL-KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
+ L L+ KF ++PN K Q W+ RPL ++ YA D L+ ++
Sbjct: 368 ALSLAFLMKKFCNVTPN---KQFQLA------DWRIRPLPDELKSYAREDTHYLIYIYKM 418
Query: 204 MTKEYALKQNR 214
M +E K N+
Sbjct: 419 MKRELLHKTNK 429
>gi|254579989|ref|XP_002495980.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
gi|238938871|emb|CAR27047.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
Length = 741
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 42/207 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + I+KV HGAF D L + + + +++DT A AL PR H
Sbjct: 276 LNEVFANPLIVKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASRALGF--PR--------H 325
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ + + K + + W+ RPL+ M YA AD LL ++ ++
Sbjct: 326 SLAY--LLETFASFKTSKKYQLAD--------WRVRPLSKAMSAYARADTHFLLNIYDQL 375
Query: 205 TKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYIEE 264
+N+L+++N + L N+ K R Q ++R + +S Y ++
Sbjct: 376 -------RNKLIIENKLAGVLAES---RNVAK----RSFQYSKYRPKVPNSSV-YSPVDR 420
Query: 265 VNSNEYIWR---NDYNVPLANAKLLNN 288
+ W+ N YN+PL L+ N
Sbjct: 421 ADG----WKVLMNQYNIPLEKEILVKN 443
>gi|302501205|ref|XP_003012595.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
gi|291176154|gb|EFE31955.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
Length = 1069
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HG+ D L + + L ++DT A +ALQL P+ + L+
Sbjct: 495 LNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQL--PKKSLKFLLHE 552
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+G D K Y+ + W+ RPL + ML YA +D LL +F R+
Sbjct: 553 YVGF-DADKQYQTA-----------------DWRIRPLLAGMLDYARSDTHFLLYIFDRL 594
>gi|326473059|gb|EGD97068.1| hypothetical protein TESG_04488 [Trichophyton tonsurans CBS 112818]
Length = 898
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 29/143 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HG+ D L + + L ++DT A +ALQL P+ + L+
Sbjct: 298 LNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQL--PKKSLKFLLHE 355
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+G D K Y+ + W+ RPL + ML YA +D LL +F R+
Sbjct: 356 YVGF-DADKQYQTA-----------------DWRIRPLLAGMLDYARSDTHFLLYIFDRL 397
Query: 205 TKEYALKQNRLLLDNLIYETLFN 227
+N+LL +L E+ F
Sbjct: 398 -------RNQLL--DLPSESGFG 411
>gi|294865716|ref|XP_002764472.1| hypothetical protein Pmar_PMAR012804 [Perkinsus marinus ATCC 50983]
gi|239863939|gb|EEQ97189.1| hypothetical protein Pmar_PMAR012804 [Perkinsus marinus ATCC 50983]
Length = 703
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 27/163 (16%)
Query: 40 KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEV--LESD-RIL 95
+V +DLE ++ G L+ +A + K +I DV + P IM K+H+ + SD I+
Sbjct: 564 EVAIDLEHHNMQSYRGFTCLIQIATRK-KDYIVDVLA-PGIMM--KMHDFNRITSDPGIV 619
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L + + L N++DT A L+L L +LL FY
Sbjct: 620 KVLHGADMDVQWLQRDLSAYLCNMFDTGQAARVLELG-----------GGYSLKNLLDFY 668
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
+K + N + W+ RPL+ M YA DV LL
Sbjct: 669 ----CGYKADKANQLAD----WRQRPLSERMKQYARDDVHYLL 703
>gi|327308500|ref|XP_003238941.1| exosome component 3'-5' exonuclease [Trichophyton rubrum CBS
118892]
gi|326459197|gb|EGD84650.1| exosome complex exonuclease Rrp6 [Trichophyton rubrum CBS 118892]
Length = 867
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HG+ D L + + L ++DT A +ALQL P+ + L+
Sbjct: 308 LNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQL--PKKSLKFLLHE 365
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+G D K Y+ + W+ RPL + ML YA +D LL +F R+
Sbjct: 366 YVGF-DADKQYQTA-----------------DWRIRPLLAGMLDYARSDTHFLLYIFDRL 407
>gi|321468927|gb|EFX79910.1| hypothetical protein DAPPUDRAFT_304334 [Daphnia pulex]
Length = 834
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 31/204 (15%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
+I Q +S + +L E+ + +DLE G L+ ++ + +I D L
Sbjct: 235 MIDTEQGLKSLLKDLLEETVIAVDLEAHSYRSFQGLTCLMQISTSSSD-YIIDT----LE 289
Query: 80 MFDG--KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLL 137
++D L+EV + +I+K+ HGA D L +F I + N++DT A L +
Sbjct: 290 LWDQLQPLNEVFCNPKIVKIFHGADMDIQWLQRDFGIYVVNLFDTYHAAKLLGFAQ---- 345
Query: 138 SQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
+ L+ LL+ Y + + + + W+ RPL M+ YA D L
Sbjct: 346 --------LSLSFLLRHYCQVIADKQYQLAD--------WRIRPLPEQMVNYAREDTHYL 389
Query: 198 LALFHRMTKEYALKQNRLLLDNLI 221
++ +M K+ +K DNL+
Sbjct: 390 GYIYEKMKKDLKMKGTG---DNLL 410
>gi|332667981|ref|YP_004450769.1| 3'-5' exonuclease [Haliscomenobacter hydrossis DSM 1100]
gi|332336795|gb|AEE53896.1| 3'-5' exonuclease [Haliscomenobacter hydrossis DSM 1100]
Length = 395
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
++ L+ +A ++G +F+ D + PL D L E++E+ I+KV H D L ++F
Sbjct: 41 RLCLIQVATRHG-LFLIDPF--PLKNLDPFL-EMIENPNIVKVTHAGENDYRLLYASFGT 96
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
KN +DTQ A L P L F K+ K N+ +
Sbjct: 97 IPKNTFDTQIAAGFLGYRYP-----------------LAFKKLVETELKINMNKSF--TV 137
Query: 175 HIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRL 215
W+ RP + L YA D+E L L+ +M + L++ RL
Sbjct: 138 ADWEARPFNQNQLKYAIQDIEPLYDLW-KMQEADLLRKKRL 177
>gi|169622866|ref|XP_001804841.1| hypothetical protein SNOG_14657 [Phaeosphaeria nodorum SN15]
gi|111056729|gb|EAT77849.1| hypothetical protein SNOG_14657 [Phaeosphaeria nodorum SN15]
Length = 279
Score = 45.4 bits (106), Expect = 0.12, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 43 LDLEGMDLGVDGKVSLVSLAL-QNGKIFIFDVYSCPLIMF-----DGK-LHEVLESDRIL 95
LDLEG+ L G +S++++ L + +IF+ D+++ + F GK L VLE +I
Sbjct: 38 LDLEGVPLSRSGSISILTIFLPSSARIFLIDMHTLGALAFTTPSSQGKTLKHVLEDSQIT 97
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV D+ L +++ + L+ V D Q +A + L IGL ++
Sbjct: 98 KVFFDVRNDSDALYAHYGVALQCVEDVQLMESAAREKTA------LRRTVIGLARCVEKN 151
Query: 156 KISPNNF---KKNIQNLYRE----NPHIWKTRPLTSDMLLYAAADVESLLAL 200
+ + + K + L++ + ++ RP+ +D++ Y A DV L+ L
Sbjct: 152 CSATSTWQAAKSRGEKLFKPELGGSYEVFNQRPIPADIVAYCAGDVGCLVQL 203
>gi|407404412|gb|EKF29876.1| hypothetical protein MOQ_006321 [Trypanosoma cruzi marinkellei]
Length = 713
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 31/201 (15%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH- 86
+ +A +L E ++ +DLE G L+ ++ ++ I I C + +H
Sbjct: 223 EEVVALLLKEKEIAVDLEHHSFYSYQGFTCLMQISTRSEDILI----DC--LKLRSSMHL 276
Query: 87 --EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
V + ILKV+HGA D L +F + L N +DT A L + PH
Sbjct: 277 LAPVFLNSNILKVLHGAREDIRWLQKDFGLYLVNFFDTGIALQTLHM-----------PH 325
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ + F ++ N K Q W+ RP+ ++M+ YA D LL ++ R+
Sbjct: 326 GLAFA-VDHFCQVKLN---KKYQTA------DWRIRPIPAEMVAYARQDTHFLLYVYDRL 375
Query: 205 TKEYALKQNRLLLDNLIYETL 225
+ R + NL+ L
Sbjct: 376 KTLLLNSEGRASIGNLLVHVL 396
>gi|344234698|gb|EGV66566.1| hypothetical protein CANTEDRAFT_128954 [Candida tenuis ATCC 10573]
Length = 737
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 33/207 (15%)
Query: 3 AKCQPQNNLLRTLMNRTNLITDVQEAQ--SAMATILNESKVGLDLEGMDL-GVDGKVSLV 59
+KC P + TN I Q Q + + N S++ +DLE D G V L+
Sbjct: 196 SKCDP---IPSNPWESTNAIWIDQPEQIDELVNELSNSSEIAVDLEHHDYRTYYGLVCLM 252
Query: 60 SLALQNGKIFIFDVYSCPLIMFDG--KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLK 117
++ + K +I D L + D KL+ V + +I+KV HGAF D L + + +
Sbjct: 253 QISTRK-KDWIIDT----LALRDDLQKLNVVFTNPQIVKVFHGAFMDIIWLQRDLGLYIV 307
Query: 118 NVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIW 177
+++DT A + +L P+ L LL+ + + K + + W
Sbjct: 308 SLFDTYHA--SKKLGFPKF----------SLAYLLETFAKFKTSKKYQLAD--------W 347
Query: 178 KTRPLTSDMLLYAAADVESLLALFHRM 204
+ RPL++ ML YA +D LL +F +
Sbjct: 348 RIRPLSTSMLAYARSDTHFLLNIFDHL 374
>gi|386834151|ref|YP_006239466.1| ribonuclease D [Pasteurella multocida subsp. multocida str. 3480]
gi|385200852|gb|AFI45707.1| ribonuclease D [Pasteurella multocida subsp. multocida str. 3480]
Length = 383
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 80 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQIMANFLGF-----------PNSTG 128
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 129 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLIYAAADVWYLLPLYQRMQE 179
Query: 207 EYA 209
E A
Sbjct: 180 ELA 182
>gi|302657746|ref|XP_003020587.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
gi|291184437|gb|EFE39969.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
Length = 881
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HG+ D L + + L ++DT A +ALQL P+ + L+
Sbjct: 311 LNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQL--PKKSLKFLLHE 368
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+G D K Y+ + W+ RPL + ML YA +D LL +F R+
Sbjct: 369 YVGF-DADKQYQTA-----------------DWRIRPLLAGMLDYARSDTHFLLYIFDRL 410
>gi|148266297|ref|YP_001233003.1| 3'-5' exonuclease [Geobacter uraniireducens Rf4]
gi|146399797|gb|ABQ28430.1| 3'-5' exonuclease [Geobacter uraniireducens Rf4]
Length = 409
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 23 TDVQEAQSAMATILN----ESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCP 77
TD+ E Q A+ ++ E+ + DLE L KV L+ ++ N + + D P
Sbjct: 36 TDIIEDQQALNRLVERLNTETTLAFDLEADSLHHYTEKVCLIQVS-TNSETALID----P 90
Query: 78 LIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
L D L +L + + KV HGA D L +F ++N++DT A
Sbjct: 91 LAPLDLSPLAPILANPAVRKVFHGADYDMRSLYRDFGFEVRNLFDTMIA----------- 139
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
SQ L +GL LK F + Y++ W RP + M+ YA D
Sbjct: 140 -SQFLGEKEVGLAAALK------KRFGVELDKKYQKAD--WSKRPFSPQMIEYAMKDTSL 190
Query: 197 LLALFHRMTKE 207
L+ L+ ++ E
Sbjct: 191 LIKLYLQLEDE 201
>gi|392566464|gb|EIW59640.1| hypothetical protein TRAVEDRAFT_147720 [Trametes versicolor
FP-101664 SS1]
Length = 850
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
+L+EV ++KV HGA D L +FN+ + N++DT A L PR
Sbjct: 307 ELNEVFTDPDVVKVFHGAESDIVWLQQDFNLYVVNLFDTYHASKVLDF--PRH------- 357
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
GL LL+ Y +F + + + W+ RPL +ML YA +D LL ++
Sbjct: 358 ---GLATLLEMY----CDFTADKRYQLAD----WRIRPLPEEMLQYARSDTHFLLFIY 404
>gi|206598216|gb|ACI16020.1| exosome subunit Rrp6P [Bodo saltans]
Length = 741
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 40 KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
+V +DLE D G L+ L+ ++ + +I DV M +L+ V ILKV
Sbjct: 240 EVAVDLEHHDFRSFQGITCLMQLSTRS-EDYIVDVLRLRSHMH--RLNRVFLDTNILKVF 296
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKIS 158
HGA D L +F + + N++DT A L + + D H G+ L K Y+ +
Sbjct: 297 HGAKEDVRWLQKDFGLYVANMFDTGIALQTLHMPHSLAFAVD---HFCGVR-LDKKYQTA 352
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLD 218
W+ RP+ S+M+ YA D LL + R+ + R +
Sbjct: 353 D-----------------WRIRPVPSEMIHYARQDTHYLLYVHDRLKALLLHAEGRASVG 395
Query: 219 NLI 221
NL+
Sbjct: 396 NLL 398
>gi|254877166|ref|ZP_05249876.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254843187|gb|EET21601.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 364
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 38/215 (17%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
++ LV +A +N +IF+ D + + F KL ++ E I K+IH A D + F+
Sbjct: 37 ELCLVQIATEN-EIFLID--TLEDLDF-SKLKDIFEDTNIQKIIHSATNDIPIIKRFFDC 92
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
+ N++DTQ A + L +Q + L D+L + F
Sbjct: 93 EVNNIFDTQLAASFLG-------TQSQISLKALLKDILDIEMEKESQFSD---------- 135
Query: 175 HIWKTRPLTSDMLLYAAADVESLLAL-FHRMTK----EYALKQNRLLLDNLIYETLFNHV 229
W+ RPL+ YA DVE L+ + +H +K +Y LLD I +T FN V
Sbjct: 136 --WRKRPLSQKQFDYALKDVEHLIEIKYHLESKLNQTDYKQYFYEELLD--IQKTEFNTV 191
Query: 230 VPL-----NIRKRRQFRQNQ---LRRWRKDLMSSK 256
+ NI+K + Q + +WR+ + K
Sbjct: 192 ENIHNKIGNIQKFSEKTQKNAILVAQWRESMAQQK 226
>gi|197122666|ref|YP_002134617.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
gi|196172515|gb|ACG73488.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
Length = 288
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L E+L R + V+HGA D L + R+ ++DT A A +L P L
Sbjct: 71 LGEILCDGREV-VLHGADYDVRCLHREYGWRIPRLFDTMIA--ARRLGRPGL-------- 119
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
GL+ L++ +F + ++ + W RPLT D L YAA D LL LF +
Sbjct: 120 --GLSALVE------AHFGVRLSKAFQRS--DWGRRPLTPDQLAYAALDTHFLLPLFDLL 169
Query: 205 TKEYALK 211
T E A +
Sbjct: 170 TGELATR 176
>gi|170717427|ref|YP_001784527.1| ribonuclease D [Haemophilus somnus 2336]
gi|168825556|gb|ACA30927.1| ribonuclease D [Haemophilus somnus 2336]
Length = 381
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 87 EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTI 146
++L + ++ KV+H D F + DTQ LQ + +I
Sbjct: 79 QLLANQKVTKVLHACSEDLEVFQHYFQQLPTPMLDTQIMAAFLQHGN-----------SI 127
Query: 147 GLNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
GL LLK Y FK I + + R N W RPL+ L YAAADV LL L+ RM
Sbjct: 128 GLATLLKHY------FKLEIDKGISRTN---WLARPLSDVQLHYAAADVWYLLPLYQRMQ 178
Query: 206 KEYA 209
++ A
Sbjct: 179 QKLA 182
>gi|396483292|ref|XP_003841672.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
gi|312218247|emb|CBX98193.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
Length = 783
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 40/218 (18%)
Query: 5 CQPQNNLLRTLMNRTNLITDVQEAQSAMATILNESK-VGLDLEGMD-LGVDGKVSLVSLA 62
+PQ + T + D EA ++M L +K + +DLE D G VSL+ ++
Sbjct: 202 AEPQR--YEPFESTTAIFVDTPEALASMLAELKTAKEIAVDLEHHDNRSYIGIVSLMQIS 259
Query: 63 LQNGKIFIFDVY-------SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIR 115
+N + +I D C L+EV + I+KV+HGA+ D L + +
Sbjct: 260 TRN-QDWIVDTLKPWRRKLEC--------LNEVFANPDIIKVLHGAYMDIMWLQRDLGLY 310
Query: 116 LKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPH 175
+ ++DT A A L P L+ IG K Y+I+
Sbjct: 311 VVGLFDTYHA--ARSLGYPGASLAYLLDRFIGFK-AQKQYQIA----------------- 350
Query: 176 IWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQN 213
W+ RPL ++ YA AD LL +F M E K +
Sbjct: 351 DWRIRPLGKELFEYARADTHFLLYIFDNMRNELVEKSD 388
>gi|195390616|ref|XP_002053964.1| GJ23053 [Drosophila virilis]
gi|194152050|gb|EDW67484.1| GJ23053 [Drosophila virilis]
Length = 904
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ +V+ + A+ + ++ +D+E G LV ++ + K +IFD +
Sbjct: 276 LVDNVETLKQALEELRQAPQIAIDVEHHSYRTFMGITCLVQMSTRT-KDYIFDTLTLRED 334
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M L+ VL ++LK++HG D L + ++ + N++DT A AL ++ RL
Sbjct: 335 MH--ILNLVLTDPKVLKILHGGDLDIEWLQRDLSLYIVNMFDTHRAAKALNMA--RLSLA 390
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
L+ H + L D+ K +++ W+ RPL ++ YA D L+
Sbjct: 391 FLLKHYLDL-DVDKSLQLA-----------------DWRMRPLPQKLIDYARQDTHYLIY 432
Query: 200 LFHRMT 205
++ R+T
Sbjct: 433 VYERLT 438
>gi|391347098|ref|XP_003747802.1| PREDICTED: exosome component 10-like [Metaseiulus occidentalis]
Length = 867
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 30 SAMATILNESK----VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK 84
A+ +L E K + +DLE G LV ++ + K +I D PL + G
Sbjct: 258 GALKKVLEELKQHRQIAIDLEHHSFRSFMGFTCLVQVSTWD-KDYIID----PLEL-RGH 311
Query: 85 LH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
LH EV +I+KV+HG+ D L +F + + N++DT A L
Sbjct: 312 LHVLNEVTTDPKIVKVLHGSHSDVQWLQRDFGVYIVNLFDTGIAAKLLNYE--------- 362
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
+ L+ LLK ++ ++ + + + W+ RPL +M+ YA D LL++
Sbjct: 363 ---RLSLSYLLKKFEQVESDKRFQLVD--------WRIRPLPKEMIEYARTDTHYLLSIC 411
Query: 202 HRMTKE 207
++ +E
Sbjct: 412 EKLKEE 417
>gi|403337439|gb|EJY67935.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 706
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 42/208 (20%)
Query: 21 LITDVQEAQSAMATILNESK-VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ D QE IL E + +G+DLEG L +G++ L+ L ++ + IFD+Y+ I
Sbjct: 466 LVVDSQEKLVQAHIILKEQESLGVDLEG-KLKKNGQIVLLQLGCKDDVVIIFDIYT---I 521
Query: 80 MFDGKLHE--------VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCA------ 125
D +L+ V I KV D L +KN +D Q
Sbjct: 522 EKDFQLYSNVRKVLNSVFMDQSIRKVFFDGRKDIEALHFILWTGIKNAFDVQGIHMIYSQ 581
Query: 126 ----------FTALQLSDPRL---LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRE 172
F + P L L Q+ + H G+N L + FK Q+ +
Sbjct: 582 VKELKKNRKNFEIKGIMTPGLNEVLRQNPIKH--GINTL-------KSKFKAIFQDFIKT 632
Query: 173 NPHIWKTRPLTSDMLLYAAADVESLLAL 200
N I+ RP+ + L YA+ DV+ L L
Sbjct: 633 N-QIFYQRPICDEFLSYASQDVQDLSEL 659
>gi|302829368|ref|XP_002946251.1| hypothetical protein VOLCADRAFT_86339 [Volvox carteri f.
nagariensis]
gi|300269066|gb|EFJ53246.1| hypothetical protein VOLCADRAFT_86339 [Volvox carteri f.
nagariensis]
Length = 265
Score = 45.1 bits (105), Expect = 0.18, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 385 SEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQEH 444
SEVL + ++LDLK NGR R++ I++ K S + P+ GL S +Q
Sbjct: 30 SEVLKVQNKIFYLDLKQNGRGRYIKIAEKGKYRPKSSVVV-------PLSGLHSFMQLFE 82
Query: 445 SCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
+ + P+ + +K F F+ +N +G ++RI E
Sbjct: 83 YYLKTDGSGPQARDVVVESKVFNFSCGENDRGRYLRIFE 121
>gi|345566704|gb|EGX49646.1| hypothetical protein AOL_s00078g135 [Arthrobotrys oligospora ATCC
24927]
Length = 254
Score = 45.1 bits (105), Expect = 0.18, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 34/189 (17%)
Query: 37 NESKVGLDLEGMDLGVDGKVSLVSLAL----QNGKIFIFDVYSCPLIMFDGK-------- 84
N + +DLEG+DL G +SL+ + L QN FI D+++ F
Sbjct: 28 NVPSIYIDLEGIDLSRHGYISLLQIFLFPLSQN---FILDIHTLGHSAFTTSSPDDPSRT 84
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
+LE I V + D L + ++I L NV D Q A + RLL+
Sbjct: 85 FKSILEDPNIPIVCYDIRADNDALYNLYSISLANVIDLQLLELATRHGSRRLLN------ 138
Query: 145 TIGLNDLLKFYKISPNNFKKN---IQNLYRE--------NPHIWKTRPLTSDMLLYAAAD 193
GL+ +++Y I + K + I+ R + I+ +RPL D+L Y D
Sbjct: 139 --GLSRSIQYYPILSASEKYDWVEIKERGRRLFAPERGGSYEIFNSRPLPDDLLEYCVQD 196
Query: 194 VESLLALFH 202
V+ L L+
Sbjct: 197 VQHLQKLWQ 205
>gi|421263442|ref|ZP_15714489.1| ribonuclease D [Pasteurella multocida subsp. multocida str. P52VAC]
gi|401689568|gb|EJS84980.1| ribonuclease D [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 391
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 88 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQVMANFLGF-----------PNSTG 136
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 137 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLIYAAADVWYLLPLYQRMQE 187
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 188 --ALAQTR 193
>gi|357116782|ref|XP_003560156.1| PREDICTED: uncharacterized protein LOC100837522 [Brachypodium
distachyon]
Length = 909
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 29/198 (14%)
Query: 12 LRTLMNRTNLITDVQEAQSAMATILNESKV-GLDLEGMDL-GVDGKVSLVSLALQNGKIF 69
+ T N N + ++ +A +L++ +V +D E L G +LV ++ Q + +
Sbjct: 140 MSTSYNWVNTVAQLEH----LAKLLSDEEVFAVDTEQHSLRSFLGYTALVQISTQK-EDY 194
Query: 70 IFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
+ D + M G L V S I K+ HGA D L +F+I + N++DT A
Sbjct: 195 LIDTIALHDAM--GILRPVFSSPSICKIFHGADNDVLWLQRDFHIYVVNIFDT--AKACE 250
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
LS P+ L LL+ Y + + + RE+ W+ RPLT +M+ Y
Sbjct: 251 VLSKPQ----------KSLAYLLEIYCGVTTD-----KTMQRED---WRVRPLTPEMVEY 292
Query: 190 AAADVESLLALFHRMTKE 207
A +D LL + + + E
Sbjct: 293 ARSDAHYLLKIANCLASE 310
>gi|337755515|ref|YP_004648026.1| ribonuclease D [Francisella sp. TX077308]
gi|336447120|gb|AEI36426.1| Ribonuclease D [Francisella sp. TX077308]
Length = 364
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
++ LV +A +N +IF+ D + + F KL ++ E I K+IH A D + F+
Sbjct: 37 ELCLVQIATEN-EIFLID--TLEDLDF-SKLKDIFEDTNIQKIIHSATNDIPIIKRFFDC 92
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
+ N++DTQ A + L +Q + L D+L + F
Sbjct: 93 EVNNIFDTQLAASFLG-------TQSQISLKALLKDILDIEMEKESQFSD---------- 135
Query: 175 HIWKTRPLTSDMLLYAAADVESLLAL-FHRMTK 206
W+ RPL+ YA DVE L+ + +H +K
Sbjct: 136 --WRKRPLSQKQFDYALKDVEHLIEIKYHLESK 166
>gi|444706826|gb|ELW48144.1| Exonuclease 3'-5' domain-containing protein 1 [Tupaia chinensis]
Length = 409
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 48/123 (39%)
Query: 65 NGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
N ++++FD++ F+ L +LE RILKVIH + L + I L NV+DTQ
Sbjct: 68 NSRVYLFDIFLLGSRAFNNGLQMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQ- 126
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
ENP +W TRPL+
Sbjct: 127 -----------------------------------------------ENPEVWFTRPLSP 139
Query: 185 DML 187
+L
Sbjct: 140 SLL 142
>gi|302765286|ref|XP_002966064.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
gi|300166878|gb|EFJ33484.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
Length = 512
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V + I KVIHG+ D L +F I + N++DT A L++
Sbjct: 289 LRSVFANPSIRKVIHGSDRDILWLQRDFGIYVCNLFDTGQAARVLRM------------E 336
Query: 145 TIGLNDLLK-FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
GL LL+ F +++P+ R W+ RPL+++ML YA D LL ++ +
Sbjct: 337 RFGLAFLLQTFCEVTPDK---------RYQLADWRLRPLSAEMLKYAREDTHYLLYVYDK 387
Query: 204 M 204
M
Sbjct: 388 M 388
>gi|302833517|ref|XP_002948322.1| hypothetical protein VOLCADRAFT_58009 [Volvox carteri f.
nagariensis]
gi|300266542|gb|EFJ50729.1| hypothetical protein VOLCADRAFT_58009 [Volvox carteri f.
nagariensis]
Length = 191
Score = 44.7 bits (104), Expect = 0.21, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V R++KV HGA D L +F++ L N++DT A L L
Sbjct: 65 LARVFADPRVVKVFHGADSDVDWLQRDFSLFLVNMFDTGQAARVLGLP------------ 112
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ GL LL+ +Q R W+ RPL+ ML YA D LL ++ ++
Sbjct: 113 SFGLAYLLESI--------CGVQADKRYQMADWRVRPLSPPMLHYARCDTHYLLYVYDKL 164
Query: 205 TKEYA 209
++ A
Sbjct: 165 REQLA 169
>gi|257784443|ref|YP_003179660.1| ribonuclease D [Atopobium parvulum DSM 20469]
gi|257472950|gb|ACV51069.1| ribonuclease D [Atopobium parvulum DSM 20469]
Length = 379
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 77 PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
PL++ D L E+LE+ I+K++H D LL + V+DTQ A L
Sbjct: 57 PLLIDDLTPLKELLENPEIVKILHACSQDLEVLLEKMDCACAPVFDTQVAAAFL------ 110
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
G+ + + + NF N++ E+ W RPL + L+YA DV
Sbjct: 111 -----------GMRQQVSYAGLV-ENFA-NVKLAKAESLTDWSKRPLDKEQLVYAEDDVR 157
Query: 196 SLLALFHRMTKEYALKQNRL 215
L A++++M E +K +RL
Sbjct: 158 YLPAIYNQMV-EKLIKLDRL 176
>gi|296815198|ref|XP_002847936.1| exosome component 3'-5' exonuclease [Arthroderma otae CBS 113480]
gi|238840961|gb|EEQ30623.1| ribosomal RNA processing 3'-5' exonuclease [Arthroderma otae CBS
113480]
Length = 810
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 23/191 (12%)
Query: 18 RTNLITDVQEAQSAMATILNESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSC 76
+ + +++ + +A + ++ +DLE D V G V L+ ++ + + +I D
Sbjct: 245 KATFVETMEDVHAMLAELKKAKEIAVDLEHHDAHVYHGLVCLMQISTRE-QDWIVDTLK- 302
Query: 77 PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
P L+EV I+KV+HG+ D L + + L ++DT A + LQL P+
Sbjct: 303 PWRDQLQVLNEVFADPSIVKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASMLQL--PKK 360
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
+ L+ +G D K Y+ + W+ RPL ML YA +D
Sbjct: 361 SLKFLLQQYVGF-DADKQYQTA-----------------DWRIRPLLPGMLDYARSDTHF 402
Query: 197 LLALFHRMTKE 207
LL +F R+ E
Sbjct: 403 LLYIFDRLRNE 413
>gi|427793373|gb|JAA62138.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6, partial [Rhipicephalus pulchellus]
Length = 911
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 22/137 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV +ILKV HGA D L +F + L ++DT A L L+
Sbjct: 337 LNEVFADPKILKVFHGADMDVLWLQRDFGLYLVGLFDTGQAAKVLGLAH----------- 385
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L LLK Y + + + + W+ RPL +M+ YA +D LL + M
Sbjct: 386 -FSLAFLLKHYCQIEADKQFQLAD--------WRIRPLPPEMVSYAQSDTHYLLYIMDCM 436
Query: 205 TKEYALKQNRLLLDNLI 221
++ A + N DNL+
Sbjct: 437 KRDLADRSNE--NDNLL 451
>gi|425063390|ref|ZP_18466515.1| Ribonuclease D [Pasteurella multocida subsp. gallicida X73]
gi|404382953|gb|EJZ79410.1| Ribonuclease D [Pasteurella multocida subsp. gallicida X73]
Length = 383
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 80 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQVMANFLGF-----------PNSTG 128
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 129 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLIYAAADVWYLLPLYQRMQE 179
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 180 --ALAQTR 185
>gi|33152538|ref|NP_873891.1| ribonuclease D [Haemophilus ducreyi 35000HP]
gi|33148762|gb|AAP96280.1| ribonuclease D [Haemophilus ducreyi 35000HP]
Length = 373
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 23/125 (18%)
Query: 87 EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ--CAFTALQLSDPRLLSQDLVPH 144
++L + I+KV+H D FN L + DTQ AF+ L LS
Sbjct: 72 DLLANPNIVKVLHACSEDLEIFQHQFNQALTPLIDTQIMAAFSGLGLS------------ 119
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
IG L+ Y NI+ + W RPLT L YAAADV LL ++ ++
Sbjct: 120 -IGFAKLVNHYL--------NIELDKGASRTDWLARPLTETQLQYAAADVYYLLPIYQKL 170
Query: 205 TKEYA 209
E A
Sbjct: 171 QAELA 175
>gi|293334443|ref|NP_001170525.1| uncharacterized protein LOC100384536 [Zea mays]
gi|238005848|gb|ACR33959.1| unknown [Zea mays]
gi|414864884|tpg|DAA43441.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 666
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F+I + N++DT A LQ+ L + L+ H G+
Sbjct: 227 KVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQMERNSL--EHLLLHFCGVT------ 278
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF----HRMTKEYALK 211
KK QN W++RPL +M+ YA D LL ++ R+ +E
Sbjct: 279 ------AKKEYQNA------DWRSRPLPDEMIKYAREDTHYLLYIYDLMRQRLQRESTF- 325
Query: 212 QNRLLLD 218
+N LLL+
Sbjct: 326 ENDLLLE 332
>gi|378774408|ref|YP_005176651.1| ribonuclease D [Pasteurella multocida 36950]
gi|356596956|gb|AET15682.1| ribonuclease D [Pasteurella multocida 36950]
Length = 383
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 80 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQVMANFLGF-----------PNSTG 128
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 129 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLIYAAADVWYLLPLYQRMQE 179
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 180 --ALAQTR 185
>gi|347841998|emb|CCD56570.1| similar to 3'-5' exonuclease [Botryotinia fuckeliana]
Length = 283
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLA-LQNGKIFIFDVYSCPLIMFDGK------LHEVLESDR 93
V +DLEG+D+G G ++++ + L + F+ DV++ F L +LES
Sbjct: 65 VYIDLEGVDIGRKGSIAILQVYILPTKRTFLVDVHNLRGQAFSTPNSSGLTLKAILESIF 124
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS-------QDLV--PH 144
I KVI D+ L S+F I+L+ V D Q A + + LS QDLV P
Sbjct: 125 IPKVIFDVRNDSDALYSHFGIKLQGVIDLQLMELATRSHSQKFLSGLGRCMDQDLVQTPE 184
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENP---HIWKTRPLTSDMLLYAAADVESLLALF 201
+ + +K K+ +Q E ++ RPL ++ Y DV+ + L+
Sbjct: 185 ELEVRSSIK---------KRGVQLFAPEKGGRYEVFNDRPLDPAIVDYCVQDVQLMPQLW 235
Query: 202 H-------RMTKEYALKQNR 214
+ M K +A K R
Sbjct: 236 NIYNAKLSLMDKRWAAKIER 255
>gi|357475063|ref|XP_003607817.1| Transcription factor Pur-alpha [Medicago truncatula]
gi|355508872|gb|AES90014.1| Transcription factor Pur-alpha [Medicago truncatula]
Length = 293
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 31 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYVNS--- 86
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
+ + S+ L DT+ ++ D+ +N R RF+ +S+ V S+I PA
Sbjct: 87 -------EDQELFSKELQLDTKVFYFDIGENRRGRFLKVSE-ASVSRNRSTIIVPA 134
>gi|448119348|ref|XP_004203709.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359384577|emb|CCE78112.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 756
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 22/140 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E+ + +ILKV HGAF D L + + + +++DT A L LS
Sbjct: 291 LNEIFTNPQILKVFHGAFMDIIWLQRDLGLYIVSLFDTYHAAKKLGLS------------ 338
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L LL+ + + K + + W+ RPL+ M YA +D LL ++ +M
Sbjct: 339 KFSLAYLLESFAKFKTSKKYQLAD--------WRLRPLSPAMKAYARSDTHFLLYIYDQM 390
Query: 205 TKEYALKQNRLLLDNLIYET 224
+ L +N L ++YE+
Sbjct: 391 RNK--LLENDGKLQEVLYES 408
>gi|154315768|ref|XP_001557206.1| hypothetical protein BC1G_04456 [Botryotinia fuckeliana B05.10]
Length = 307
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 35/204 (17%)
Query: 37 NESKVGLDLEGMDLGVDGKVSLVSLA-LQNGKIFIFDVYSCPLIMFDGK------LHEVL 89
+ V +DLEG+D+G G ++++ + L + F+ DV++ F L +L
Sbjct: 85 SPPSVYIDLEGVDIGRKGSIAILQVYILPTKRTFLVDVHNLRGQAFSTPNSSGLTLKAIL 144
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS-------QDLV 142
ES I KVI D+ L S+F I+L+ V D Q A + + LS QDLV
Sbjct: 145 ESIFIPKVIFDVRNDSDALYSHFGIKLQGVIDLQLMELATRSHSQKFLSGLGRCMDQDLV 204
Query: 143 --PHTIGLNDLLKFYKISPNNFKKNIQNLYRENP---HIWKTRPLTSDMLLYAAADVESL 197
P + + +K K+ +Q E ++ RPL ++ Y DV+ +
Sbjct: 205 QTPEELEVRSSIK---------KRGVQLFAPEKGGRYEVFNDRPLDPAIVDYCVQDVQLM 255
Query: 198 LALF-------HRMTKEYALKQNR 214
L+ M K +A K R
Sbjct: 256 PQLWDIYNAKLSLMDKRWAAKIER 279
>gi|126328718|ref|XP_001364197.1| PREDICTED: exosome component 10 isoform 1 [Monodelphis domestica]
Length = 861
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A L L H
Sbjct: 328 LNESFTDPSIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARILNLGR----------H 377
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +M YA D LL ++ +M
Sbjct: 378 S--LDHLLKLY----CNVESNKQYQLAD----WRIRPLPEEMFNYARHDTHYLLYIYDKM 427
>gi|126328720|ref|XP_001364275.1| PREDICTED: exosome component 10 isoform 2 [Monodelphis domestica]
Length = 836
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A L L H
Sbjct: 328 LNESFTDPSIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARILNLGR----------H 377
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +M YA D LL ++ +M
Sbjct: 378 S--LDHLLKLY----CNVESNKQYQLAD----WRIRPLPEEMFNYARHDTHYLLYIYDKM 427
>gi|383310375|ref|YP_005363185.1| ribonuclease D [Pasteurella multocida subsp. multocida str. HN06]
gi|380871647|gb|AFF24014.1| ribonuclease D [Pasteurella multocida subsp. multocida str. HN06]
Length = 383
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 80 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQVMANFLGF-----------PNSTG 128
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 129 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLVYAAADVWYLLPLYQRMQE 179
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 180 --ALAQTR 185
>gi|167527362|ref|XP_001748013.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773431|gb|EDQ87070.1| predicted protein [Monosiga brevicollis MX1]
Length = 837
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
ILKV+HGA D L + ++ + N++DT A L PR H++ LL+
Sbjct: 339 ILKVLHGADSDILWLQRDHSLYIVNMFDTGQATRVLNF--PR--------HSLAW--LLQ 386
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQN 213
Y NFK + + + W+ RPL+ +ML YA D LL ++ R+ E + N
Sbjct: 387 HY----CNFKADKKYQLAD----WRVRPLSEEMLHYARCDTHFLLYIYDRLHSELLAQGN 438
>gi|363733349|ref|XP_001235033.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Gallus gallus]
Length = 1498
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 34 TILNESKVGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
T+ + + VG D+E GK ++L+ L + K ++F + S + F L +LE
Sbjct: 82 TLSDGAAVGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISS--MSGFPKGLKRLLE 139
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLN 149
+ I KV G GD L+ +F ++LK+ + A L+ + L+ LV H G
Sbjct: 140 DETIKKVGVGIEGDHWKLMGDFEVKLKSFVELADVANEKLKCKEVWSLN-GLVKHLFG-K 197
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK I N W+ PL + LYAA D + ++ ++
Sbjct: 198 QLLKDKSIRCGN---------------WEKFPLDEEQKLYAATDAYAGFIIYQKL 237
>gi|401413034|ref|XP_003885964.1| Ribonuclease D, related [Neospora caninum Liverpool]
gi|325120384|emb|CBZ55938.1| Ribonuclease D, related [Neospora caninum Liverpool]
Length = 1387
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSC--------------PLIMFDGKLH---EVLESDRILK 96
G LV++ L++ + ++C P +F+ LH + + +ILK
Sbjct: 477 GAHPLVAIDLEHHSFHSYRGFTCLLQLSTREKDYLIDPFPLFE-HLHVLNAITANPKILK 535
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
+ HGA D L +F++ + N++DT A AL VP L +LL Y
Sbjct: 536 IFHGADSDIIWLQRDFSVYVVNMFDTCVAARAL-----------AVPGGASLANLLHTYC 584
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
N + + + W+ RPLT +M YA +D L +F
Sbjct: 585 GVEANKQYQLAD--------WRRRPLTPEMEAYARSDTHYLPFIF 621
>gi|224064982|ref|XP_002301621.1| predicted protein [Populus trichocarpa]
gi|222843347|gb|EEE80894.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 44.3 bits (103), Expect = 0.25, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 32 MATILNESKV-GLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVL 89
+A L++ KV +D E L G +L+ ++ +N + ++ D + +M G L V
Sbjct: 64 LAHTLSKHKVFAVDTEQHSLRSFLGFTALIQISTRN-EDYLVDTIALHDVM--GVLAPVF 120
Query: 90 ESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLN 149
I KV HGA D L +F+I + N++DT A LS P+ L
Sbjct: 121 ADPTICKVFHGADNDVLWLQRDFHIYVVNLFDTAKACEV--LSKPQK----------SLA 168
Query: 150 DLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEY 208
LL+ Y ++ N L RE+ W+ RPL+++ML YA D LL + + E
Sbjct: 169 YLLETYCGVATNKL------LQRED---WRQRPLSAEMLEYAQTDAHYLLYIAGCLIAEL 219
Query: 209 ALKQNRLLL 217
L+ + L
Sbjct: 220 KLQDRGMYL 228
>gi|417855792|ref|ZP_12500863.1| ribonuclease D [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338215402|gb|EGP01681.1| ribonuclease D [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 391
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 88 LLANKAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQIMANFLGF-----------PNSTG 136
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 137 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLVYAAADVWYLLPLYQRMQE 187
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 188 --ALAQTR 193
>gi|314122235|ref|NP_001186629.1| exonuclease 3'-5' domain-containing protein 2 [Gallus gallus]
Length = 621
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 39/205 (19%)
Query: 13 RTLMNRTNLITDVQE---AQSAMATILNESKV-GLDLEGMDLGVDGK---VSLVSLALQN 65
R+L ++++ QE Q + T L + V G+D E + V+GK VSL+ +A +
Sbjct: 75 RSLGADIVVVSERQEWDRVQPLLKTELEKWPVLGMDCEWVS--VEGKANPVSLLQMASAS 132
Query: 66 GKIFIFDVYSCPLIMFDGK-----LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVY 120
G + + P ++ G+ L +++ D +LKV G + DA LL ++++ +K
Sbjct: 133 GLCVLVRL---PRLVASGQPVPKTLLDIMADDAVLKVGVGCWEDACKLLQDYSLPVKGSV 189
Query: 121 DTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI---- 176
D + + A++ +DL+ + + L L + K + ++PH+
Sbjct: 190 DLR--YLAMRQR------KDLLHNCLSLKSLAE----------KVLNCPLDKSPHMRCSN 231
Query: 177 WKTRPLTSDMLLYAAADVESLLALF 201
W+ LT D +LYAA D + +ALF
Sbjct: 232 WEAEELTQDQVLYAARDAQVSVALF 256
>gi|408396401|gb|EKJ75559.1| hypothetical protein FPSE_04202 [Fusarium pseudograminearum CS3096]
Length = 1034
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 32 MATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
+ ++ ++ +DLE D G VSL+ ++ + K +I D P L++V
Sbjct: 462 LGELMKAKEIAVDLEHHDFRSYVGLVSLMQISTRE-KDWIVDTLQ-PWRHKLEVLNQVFT 519
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLND 150
+ +I+KV HGA+ D L + + + ++DT F QL+ P L+ + D
Sbjct: 520 NPKIVKVFHGAYMDIIWLQRDLGLYVNGLFDT--FFACGQLNYPAKSLAYLLSKFVDF-D 576
Query: 151 LLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
K Y+++ W+ RPL +ML YA +D LL ++ R+ E
Sbjct: 577 ADKKYQLA-----------------DWRLRPLPQEMLYYARSDTHYLLYIYDRVRNE 616
>gi|357622825|gb|EHJ74204.1| hypothetical protein KGM_19917 [Danaus plexippus]
Length = 315
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 29 QSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEV 88
AM + S + + +G ++G K+ + L+ +I+IFD+ FD L ++
Sbjct: 103 HDAMDDLNQYSFICISTDGGNMGRKCKLPFLVLSTP-AQIYIFDIQVLQHHAFDAGLKKL 161
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
LESD K++H + L N++L +V+DTQ
Sbjct: 162 LESDHPKKIVHDCRKISDCLYHKHNVKLNSVFDTQ 196
>gi|213408214|ref|XP_002174878.1| exosome complex exonuclease RRP6 [Schizosaccharomyces japonicus
yFS275]
gi|212002925|gb|EEB08585.1| exosome complex exonuclease RRP6 [Schizosaccharomyces japonicus
yFS275]
Length = 782
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 29 QSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHE 87
S + + +++ +DLE D G V L+ ++ +N + +I D + +
Sbjct: 227 HSMLEELKQATEIAVDLEHHDYRSYSGFVCLMQISTRN-QDWIVDTLELREELECLNI-- 283
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V +I+KV+HGA D L +F + L ++DT A AL H G
Sbjct: 284 VFTDPKIIKVLHGATMDVIWLQRDFGLYLVGLFDTYYATKALGFEG----------H--G 331
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LLK Y + + + + W+ RPL +ML YA +D LL +F
Sbjct: 332 LAFLLKKYCQFEADKRYQMAD--------WRIRPLPKEMLKYAQSDTHFLLYVF 377
>gi|393212538|gb|EJC98038.1| hypothetical protein FOMMEDRAFT_149467 [Fomitiporia mediterranea
MF3/22]
Length = 845
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+ +I+KV+HGA D L +FNI + N++DT A L D H G
Sbjct: 318 IFTDPKIVKVLHGADSDVVWLQQDFNIYIVNLFDTYHASKLL----------DFPKH--G 365
Query: 148 LNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y P+ R W+ RPL +M+ YA +D LL ++
Sbjct: 366 LGALLEMYCDFVPDK---------RYQLADWRIRPLPDEMMKYARSDTHFLLYIY 411
>gi|414864885|tpg|DAA43442.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 577
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F+I + N++DT A LQ+ L + L+ H G+
Sbjct: 227 KVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQMERNSL--EHLLLHFCGVT------ 278
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF----HRMTKEYALK 211
KK QN W++RPL +M+ YA D LL ++ R+ +E
Sbjct: 279 ------AKKEYQNA------DWRSRPLPDEMIKYAREDTHYLLYIYDLMRQRLQRESTF- 325
Query: 212 QNRLLLD 218
+N LLL+
Sbjct: 326 ENDLLLE 332
>gi|254443317|ref|ZP_05056793.1| 3'-5' exonuclease domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198257625|gb|EDY81933.1| 3'-5' exonuclease domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 370
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 71 FDVYSCPL-IMFDGKLHEV-----LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
F+ C L + FDG ++ + L+ DR +++ G G S+F++RL ++ C
Sbjct: 40 FETKLCLLQLRFDGTIYLLDVTADLDLDRFWEILSGLHLIMHG--SDFDLRL---FEEFC 94
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
F A L D L SQ L IGL LL+ NF I +++ W RPLT
Sbjct: 95 GFEAKSLFDSMLASQLLGIKRIGLAALLE------ENFGVKIPKDSQKSD--WSQRPLTP 146
Query: 185 DMLLYAAADV-------ESLLALFHRMTKEYALKQ 212
ML YAA DV + L+A + + LKQ
Sbjct: 147 KMLKYAATDVLYLHELRDKLMARIDELGRGEWLKQ 181
>gi|15602571|ref|NP_245643.1| ribonuclease D [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720994|gb|AAK02790.1| Rnd [Pasteurella multocida subsp. multocida str. Pm70]
Length = 383
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 80 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQIMANFLGF-----------PNSTG 128
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ Y F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 129 LATLVQHY------FQLEIDKGASRTD---WLARPLSDNQLIYAAADVWYLLPLYQRMQE 179
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 180 --ALAQTR 185
>gi|342181738|emb|CCC91217.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 173
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 17/142 (11%)
Query: 510 NINVKMKTNIIIKMKRRINIITTMKRSNIIKMKRRTNIITKMKMSNIKMKINTIKMKMKT 569
N+ V+MK N+ ++ KR N+ MKR+ ++MKR + K + ++MK N + ++MK
Sbjct: 4 NLPVRMKRNLPVRRKR--NLPVRMKRNLPVRMKRNLPVRRKRNLP-VRMKRN-LPVRMKR 59
Query: 570 NNITKAKMKTSIKMKINIITKMKMEIIAKMKMNNTKMKISVTTKMESVKMVNIFTRMEMK 629
N + K ++MK N+ +MK + +MK N + V K + MK
Sbjct: 60 NLPVRMKRNLPVRMKRNLPVRMKRNLPVRMKRN-----LPVRRKRNPP--------VRMK 106
Query: 630 TNIIARVKRMTNVKMKINIIIK 651
N+ R KR V+MK N ++
Sbjct: 107 RNLPVRRKRNPPVRMKRNPPVR 128
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 507 RTNNINVKMKTNIIIKMKRRI------NIITTMKRSNIIKMKRRTNIITKMKMS-NIKMK 559
R N+ V+MK N+ ++MKR + N+ MKR+ ++MKR N+ +MK + ++MK
Sbjct: 17 RKRNLPVRMKRNLPVRMKRNLPVRRKRNLPVRMKRNLPVRMKR--NLPVRMKRNLPVRMK 74
Query: 560 IN-TIKMK------MKTNNITKAKMKTSIKMKINIITKMKMEIIAKMKMNNTKMKISVTT 612
N ++MK MK N + K ++MK N+ + K +MK N V
Sbjct: 75 RNLPVRMKRNLPVRMKRNLPVRRKRNPPVRMKRNLPVRRKRNPPVRMKRN-----PPVRG 129
Query: 613 KMES-VKMVNIFTRMEMK 629
K V+M N+ RM K
Sbjct: 130 KGRPLVRMRNLLMRMSTK 147
>gi|113460879|ref|YP_718946.1| ribonuclease D [Haemophilus somnus 129PT]
gi|112822922|gb|ABI25011.1| ribonuclease D [Haemophilus somnus 129PT]
Length = 381
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 87 EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTI 146
++L + ++ KV+H D F + DTQ LQ + +I
Sbjct: 79 QLLANQKVTKVLHACSEDLEVFQHYFQQLPTPMLDTQIMAAFLQHGN-----------SI 127
Query: 147 GLNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
GL LLK Y FK I + + R N W RPL+ L YAAADV LL L+ RM
Sbjct: 128 GLAILLKHY------FKLEIDKGISRTN---WLARPLSDVQLHYAAADVWYLLPLYQRMQ 178
Query: 206 KEYA 209
++ A
Sbjct: 179 QKLA 182
>gi|50306309|ref|XP_453127.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642261|emb|CAH00223.1| KLLA0D01309p [Kluyveromyces lactis]
Length = 744
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+++ + KV+HGAF D L + + + ++DT A L P+ H
Sbjct: 277 LNDIFTDPNVTKVLHGAFMDIIWLQRDLGLYIVGLFDTYHASRMLGF--PK--------H 326
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ + NFK + + + W+ RPLT ML YA AD LL +F ++
Sbjct: 327 SLAY--LLERFA----NFKTSKKYQLAD----WRIRPLTKPMLAYARADTHFLLNIFDKL 376
Query: 205 TKEYALKQNRL 215
+ L+QN++
Sbjct: 377 -RNSLLEQNKM 386
>gi|440292006|gb|ELP85248.1| exosome complex exonuclease RRP6, putative [Entamoeba invadens IP1]
Length = 517
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 43/260 (16%)
Query: 5 CQPQNNLLRTLMNRTNL-ITDVQEAQSAMATILNESKVGLDLEGM-DLGVDGKVSLVSLA 62
C PQ L + N L + ++ E + T+ N + +D+E + +G L+ ++
Sbjct: 173 CNPQAPL--SFENTPLLFVQNMDELNRLIKTLNNVDQFAVDVEHHSEHSYNGFACLMQIS 230
Query: 63 LQNGKIFIFDVYSCPLIMFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNV 119
++ F+ DV I +H E + +I KV HG D L NF + + N
Sbjct: 231 TRSED-FVVDV-----ITLRDSIHLLNEPFTNPKIEKVFHGCDFDMVWLSYNFGLYVVNN 284
Query: 120 YDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKT 179
+D+ A L+L L + L+ +G+ + K Y+++ W+
Sbjct: 285 FDSGQAARCLKLQHFSL--KFLLEKYVGV-EADKKYQLAD-----------------WRI 324
Query: 180 RPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRL---------LLDNLIYETLFNHVV 230
RPLT +M+ YA D LL + M E L+QN L L L T++N
Sbjct: 325 RPLTQEMINYARGDTHYLLYICDLMRNE-CLEQNVLYEVQAKSNELCLRLFKPTIYNDAA 383
Query: 231 PLNIRKRRQFRQNQLRRWRK 250
I K+ +++Q + ++K
Sbjct: 384 VERIAKKSWIKKSQFKAFKK 403
>gi|395541837|ref|XP_003772843.1| PREDICTED: Werner syndrome ATP-dependent helicase [Sarcophilus
harrisii]
Length = 1448
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E G GKV+LV L + K ++F V S + +F L +LE++ + K
Sbjct: 75 VGFDIEWPPPFWKGKSGKVALVQLCVSESKCYLFHVAS--MSVFPQGLKMLLENEAVKKA 132
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
G D LL +F+I LK+ + +++ +L ++ T L+ L+K
Sbjct: 133 GMG-IADQWKLLRDFDIHLKSFVELA------SMANEKLRCKE----TWSLDSLVKHL-- 179
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
F K + W+ PLT D YAA D + L ++ ++
Sbjct: 180 ----FSKRLLKEQSLRCSRWEDFPLTEDQKQYAAIDAYASLIVYQKL 222
>gi|432864718|ref|XP_004070425.1| PREDICTED: exosome component 10-like [Oryzias latipes]
Length = 890
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT AL L+
Sbjct: 352 LNEAFTDPTIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQGSRALHLA------------ 399
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L+ LL+ + N+ + R W+ RPL +M+ YA D LL ++
Sbjct: 400 RNSLDHLLRHF--------CNVDSDKRYQLADWRIRPLPDEMVQYARTDTHYLLYIY 448
>gi|297307109|ref|NP_001137329.2| Werner syndrome ATP-dependent helicase [Bos taurus]
Length = 1404
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 41 VGLDLEGMDL--GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
VG D+E G +V+L+ L + K ++F + S + F L +LE++ I K
Sbjct: 77 VGFDIEWPPFKKGTLSRVALIQLCVAESKCYLFHISS--MSGFPQGLKMLLENEAIKKAG 134
Query: 99 HGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
G D LL +F+I LK++ + T A L+ + T LN L+K+
Sbjct: 135 VGIEQDQWKLLRDFDINLKSIVELTDVANEKLKCIE-----------TWSLNGLVKYL-- 181
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
F K + W PLT D +YAA D + ++ ++
Sbjct: 182 ----FGKQLLKDRSIRCSDWSRFPLTEDQKVYAATDAYAGFIIYQKLA 225
>gi|333996298|ref|YP_004528911.1| putative 3'-5' exonuclease [Treponema azotonutricium ZAS-9]
gi|333735924|gb|AEF81873.1| putative 3'-5' exonuclease [Treponema azotonutricium ZAS-9]
Length = 282
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 35/170 (20%)
Query: 76 CPLIMFDGKLHEVL-----ESDRI---------LKVIHGAFGDAGGLLSNFNIRLKNVYD 121
C + +FDGK + ++ E+D I +K+++GA DA + S + +++N++D
Sbjct: 45 CLIQIFDGKTYFIIDPLNIENDEIKKFLLDKNTVKIMYGAESDASLVYSQYGTQIQNLFD 104
Query: 122 TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRP 181
Q A L L L+ L I+N + H W TRP
Sbjct: 105 LQIAVDVLDAERNGL--------DFALDHFLDI----------EIKNKKKYQSHNWTTRP 146
Query: 182 LTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVP 231
+ D + YA DV L L + E +N+ + L+YE L + +P
Sbjct: 147 IRIDAMEYALNDVAHLFKL-KDILMEQVKSKNK--YEELLYEILRKNFIP 193
>gi|338720942|ref|XP_001915839.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Equus caballus]
Length = 1405
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
+V+L+ L + K ++F + S + +F L +L + I KV G GD LL +F+I
Sbjct: 96 RVALIQLCVSESKCYLFHISS--MSVFPQGLKMLLXNKAIKKVGVGIEGDQWXLLRDFDI 153
Query: 115 RLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYREN 173
+LK+ + T A L+ ++ L+ LV H G LLK + ++
Sbjct: 154 KLKSFVELTDVANEKLKCAEIWSLN-GLVKHLFG-KQLLKDKSVRCSD------------ 199
Query: 174 PHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
W PLT D LYAA D + ++ ++
Sbjct: 200 ---WNNFPLTEDQKLYAATDAYAGFIIYRKL 227
>gi|190344443|gb|EDK36119.2| hypothetical protein PGUG_00217 [Meyerozyma guilliermondii ATCC
6260]
Length = 755
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E+ + I+KV HGAF D L + + + +++DT A L L PR
Sbjct: 289 LNEIFANPNIVKVFHGAFMDIIWLQRDLGLYVVSLFDTYHASKKLGL--PRF-------- 338
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L LL+ Y NFK + + + W+ RPL+ ML YA +D LL ++ ++
Sbjct: 339 --SLAYLLENYA----NFKTSKKYQLAD----WRMRPLSGPMLSYARSDTHFLLYVYDQL 388
>gi|58265702|ref|XP_570007.1| PM-scl autoantigen [Cryptococcus neoformans var. neoformans JEC21]
gi|57226239|gb|AAW42700.1| PM-scl autoantigen, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1016
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 28/131 (21%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
K +V I+KV HGA D L +F I + N++DT A L++ R LS
Sbjct: 374 KFGDVFTDPTIVKVFHGADSDIIWLQRDFEIFVVNLFDTYSACVVLEMPQ-RSLSA---- 428
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL----- 198
LL+ Y NF+ + + R + W+ RPL ML YA +D LL
Sbjct: 429 -------LLQHY----CNFEAD-KRYQRAD---WRIRPLPDGMLYYARSDTHFLLFIYDN 473
Query: 199 ---ALFHRMTK 206
AL H+ ++
Sbjct: 474 LRNALLHKSSR 484
>gi|134109437|ref|XP_776833.1| hypothetical protein CNBC3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259513|gb|EAL22186.1| hypothetical protein CNBC3240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1016
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 28/131 (21%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
K +V I+KV HGA D L +F I + N++DT A L++ R LS
Sbjct: 374 KFGDVFTDPTIVKVFHGADSDIIWLQRDFEIFVVNLFDTYSACVVLEMPQ-RSLSA---- 428
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL----- 198
LL+ Y NF+ + + R + W+ RPL ML YA +D LL
Sbjct: 429 -------LLQHY----CNFEAD-KRYQRAD---WRIRPLPDGMLYYARSDTHFLLFIYDN 473
Query: 199 ---ALFHRMTK 206
AL H+ ++
Sbjct: 474 LRNALLHKSSR 484
>gi|241600516|ref|XP_002405158.1| exosome component, putative [Ixodes scapularis]
gi|215502468|gb|EEC11962.1| exosome component, putative [Ixodes scapularis]
Length = 518
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV + +I+KV+HGA D L +F + L ++DT A L ++
Sbjct: 76 LNEVFANPKIIKVLHGADMDVLWLQRDFGLYLVGLFDTGQAARVLGMAH----------- 124
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L LL+ Y + K + + W+ RPL +M+ YA D LL ++ M
Sbjct: 125 -LSLAFLLRHYCHLDTDKKFQLAD--------WRIRPLPLEMIKYAREDTHYLLHVYDLM 175
Query: 205 TKEYALKQNRLLLDNLIY 222
++ K N+ L+NL++
Sbjct: 176 RRDLLAKGNQ--LNNLLH 191
>gi|242042163|ref|XP_002468476.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
gi|241922330|gb|EER95474.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
Length = 702
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F+I + N++DT A LQ+ L + L+ H G+
Sbjct: 227 KVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQMERNSL--EHLLLHFCGVT------ 278
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF----HRMTKEYALK 211
KK QN W++RPL +M+ YA D LL ++ R+ KE
Sbjct: 279 ------AKKEYQNA------DWRSRPLPDEMIKYAREDTHYLLYIYDLMRQRLQKESTF- 325
Query: 212 QNRLLLD 218
+N LLL+
Sbjct: 326 ENDLLLE 332
>gi|290490726|dbj|BAI79323.1| WRN helicase [Gallus gallus]
Length = 1498
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 34 TILNESKVGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
T+ + + VG D+E GK ++L+ L + K ++F + S + F L +LE
Sbjct: 82 TLSDGAAVGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISS--MSGFPKGLKRLLE 139
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLN 149
+ I KV G GD L+ +F ++LK+ + A L+ + L+ LV H G
Sbjct: 140 DETIKKVGVGIEGDHWKLMGDFEVKLKSFVELADVANEKLKCKEVWSLN-GLVKHLFG-K 197
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK I N W+ PL + LYAA D + ++ ++
Sbjct: 198 QLLKDKSIRCGN---------------WEKFPLDEERKLYAATDAYAGFIIYQKL 237
>gi|242050364|ref|XP_002462926.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
gi|241926303|gb|EER99447.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
Length = 760
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 16 MNRTNLITDVQEAQSAMATILNESKV-GLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDV 73
M+ T D + +A +L E + +D E + G +L+ ++ QN ++ D
Sbjct: 9 MSTTYNWVDTEAQLEHLARLLGEERAFAVDTEQHSIRSFLGYTALMQISTQNDD-YLIDT 67
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
+ +M G L V + I K+ HGA D L +F+I + N++DT A LS
Sbjct: 68 IALHDVM--GILRPVFANSSICKIFHGADNDVLWLQRDFHIYVVNMFDT--AKACETLSK 123
Query: 134 PRLLSQDLVPHTIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAA 192
P+ L LL+ Y +++ + + + RE+ W+ RPLT +M+ YA
Sbjct: 124 PQ----------KSLAYLLEVYCEVTTD------KTMQRED---WRLRPLTPEMIEYART 164
Query: 193 DVESLLALFHRMTKEYALK 211
D LL + + + E K
Sbjct: 165 DAHYLLYIANCLASELHAK 183
>gi|56783985|dbj|BAD81440.1| purine rich element binding protein B -like [Oryza sativa Japonica
Group]
Length = 336
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + ++ V D +
Sbjct: 35 VELV-SKTLQFEHKLFYFDLKENPRGRYLKISE-KTSSTRSTIIVPVAGVAWFLDLFDYY 92
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAF 425
+ R RD S+ L DT+ ++ D+ +N R RF+ +S+ V S+I
Sbjct: 93 I-------RTDERDAF---SKELRLDTKVFYFDIGENKRGRFLKVSE-ASVNRNRSTIIV 141
Query: 426 PAQDLG 431
PA G
Sbjct: 142 PAGSSG 147
>gi|405119146|gb|AFR93919.1| PM-scl autoantigen [Cryptococcus neoformans var. grubii H99]
Length = 954
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 31/193 (16%)
Query: 24 DVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMF 81
D E M L E+K + +DLE D+ G L+ ++ + ++ D + +
Sbjct: 251 DTPEKLHRMVEKLKEAKEIAVDLEHHDMRSYAGFTCLIQISTRESD-WVVDTLALRKEIQ 309
Query: 82 DGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
K +V I+KV HGA D L +F I + N++DT A L++ R LS
Sbjct: 310 QDKFGDVFTDPTIVKVFHGADSDIIWLQRDFEIFVVNLFDTYSACVVLEMPQ-RSLSA-- 366
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--- 198
LL+ Y +F+ + + R + W+ RPL ML YA +D LL
Sbjct: 367 ---------LLQHY----CSFEAD-KRYQRAD---WRIRPLPDGMLYYARSDTHFLLFIY 409
Query: 199 -----ALFHRMTK 206
AL H+ ++
Sbjct: 410 DNLRNALLHKSSR 422
>gi|218192123|gb|EEC74550.1| hypothetical protein OsI_10088 [Oryza sativa Indica Group]
Length = 599
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F+I + N++DT A LQ+ L + L+ H G
Sbjct: 220 KVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQMERNSL--EHLLRHFCG-------- 269
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH----RMTKEYALK 211
++ N K QN W++RPL+ +M+ YA D LL ++ R+ KE +
Sbjct: 270 -VTAN---KEYQNA------DWRSRPLSDEMIKYAREDTHYLLYMYDLMRLRLQKE-STS 318
Query: 212 QNRLLLD 218
N LLL+
Sbjct: 319 DNDLLLE 325
>gi|167625422|ref|YP_001675716.1| 3'-5' exonuclease [Shewanella halifaxensis HAW-EB4]
gi|167355444|gb|ABZ78057.1| 3'-5' exonuclease [Shewanella halifaxensis HAW-EB4]
Length = 297
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 29 QSAMATILNESKVGLDLEGMDLGVDGK-----VSLVSLALQNGKIFIFDVYSCPLIMFDG 83
Q A+A I +S +G D E G+ +SL+ +A ++F + + + F
Sbjct: 103 QMAIADIEAQSWIGFDTETAATFEKGRRNTNPISLIQIATAT-HCYLFRMQAINIEPFKV 161
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
L V+ ++ +LK+ G D G+ +F++ + + D QL P+ L
Sbjct: 162 ALTPVMSNEHLLKIGIGLRSDINGMKRDFDMSIAAMLDLNWLMN--QLGAPKQLGTQQAA 219
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
T+ L K K++ +N+ K + T PL+ L YAAAD L + H
Sbjct: 220 ATVLALKLPKSKKVTLSNWSKPL------------TEPLSELQLQYAAADTFVALDILHA 267
Query: 204 MTKEYALKQNRLLLDNLIYETLFNHVVPLNIRK 236
+T + A Q +L ++L + L +R+
Sbjct: 268 VTAQVAPYQ------SLWPQSLQQRLAELTMRR 294
>gi|402589191|gb|EJW83123.1| 3'-5' exonuclease [Wuchereria bancrofti]
Length = 822
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 71/193 (36%), Gaps = 52/193 (26%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS--DPRLLSQDLV 142
L+E ILKV HGA D L +F I + N++DT A L S + L Q
Sbjct: 330 LNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDTYKAMRVLNFSKFSYQHLVQTCC 389
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
HT+ KF K W+ RPLT YA +D LL +
Sbjct: 390 NHTLD----KKFQKAD------------------WRLRPLTVAHKTYARSDTHYLLHCYD 427
Query: 203 RMTKEYALKQNRLLLDNLI------------------------YETLFNHVVPLNIRKRR 238
++ K ++N +NL+ YE L PLN R+
Sbjct: 428 QLRKRLLGQEN--AANNLLEFVYNESAQTCLNVYKKPTFESDGYEKLLVGRKPLN--SRQ 483
Query: 239 QFRQNQLRRWRKD 251
QF L +WR +
Sbjct: 484 QFALAALWKWRDE 496
>gi|22298627|ref|NP_681874.1| ribonuclease D [Thermosynechococcus elongatus BP-1]
gi|22294807|dbj|BAC08636.1| tlr1083 [Thermosynechococcus elongatus BP-1]
Length = 211
Score = 43.9 bits (102), Expect = 0.35, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 24 DVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDV----YSCPL 78
D + +A+A LN ++ +D E M L + ++ LV + G++ + + P
Sbjct: 11 DYDLSPTALAHFLNADQLAVDTETMGLNIPRDRLCLVQVCDPEGQVAVVKIGRGQKEAP- 69
Query: 79 IMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
L ++LE RI K+ H A D L + IR+ V+ T+ A + PR
Sbjct: 70 -----HLQQLLEHPRITKIFHYARFDLATLRYHLGIRVHPVFCTKIASKIARTYSPRHGL 124
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
+DLV +G+ K+ Q+ N L D L YAA DV L+
Sbjct: 125 KDLVLDLLGV------------EIDKSAQSSDWGN-----ATALREDQLRYAANDVRYLI 167
Query: 199 ALFHRMT 205
L ++T
Sbjct: 168 PLRQQLT 174
>gi|387129863|ref|YP_006292753.1| Ribonuclease D [Methylophaga sp. JAM7]
gi|386271152|gb|AFJ02066.1| Ribonuclease D [Methylophaga sp. JAM7]
Length = 383
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 42/211 (19%)
Query: 72 DVYSC--PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA 128
DV +C PL + D L +VL ++ V H A D LL + ++DTQ A +
Sbjct: 50 DVIACIDPLAIDDLTPLFDVLYQPKMTLVFHAARQDLELLLMHRQQLPDTIFDTQLAASV 109
Query: 129 LQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHI---WKTRPLTSD 185
L L + ++ N K + N+ + H W RPL++
Sbjct: 110 LGLGE----------------------QVGYGNLVKTVLNVDLDKAHSRTDWTARPLSTA 147
Query: 186 MLLYAAADVESLLALFHRMTKEYA-LKQNRLLLDNLIY-----------ETLFNHVVPLN 233
L YAA DV L +L+H+M + L + L D+ ET++ +
Sbjct: 148 QLDYAADDVRYLRSLYHQMQQSLTELNRTHWLADDFAALSDPQTYQADPETIWRKIRGAG 207
Query: 234 IRKRRQFRQ-NQLRRWR-KDLMSSKRPYPYI 262
K RQ QL WR ++ + RP +I
Sbjct: 208 KLKPRQLANLQQLAAWRERNAIQRNRPRRWI 238
>gi|255566405|ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 977
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N+S +D E L G +LV ++ Q + ++ D + M G L V + +I
Sbjct: 141 NQSVFAVDTEQHSLRSFLGFTALVQISTQK-EDYLLDTIALHDAM--GILGAVFANPKIC 197
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV HG D L +F+I + N++DT A LS P+ L LL+ Y
Sbjct: 198 KVFHGGDNDILWLQRDFHIYVVNLFDT--AKACEVLSKPQK----------SLAYLLETY 245
Query: 156 -KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQN 213
+S N L RE+ W+ RPL ++ML YA D LL + + E K N
Sbjct: 246 CGVSTNKL------LQRED---WRQRPLPAEMLQYALTDAHYLLYIASCLIAELKQKDN 295
>gi|193290152|ref|NP_001123262.1| exonuclease 3'-5' domain-like 2 [Nasonia vitripennis]
Length = 605
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 36 LNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
L++ +G D E ++ + VSL+ LA NG +F + + KL E+L S +L
Sbjct: 82 LSDGVLGFDCEWVN---EEPVSLLQLATHNGVCALFRLSK--IGHIPPKLKELLSSRDLL 136
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV +F D + ++N ++ D + L P+ L+ V + ++ K
Sbjct: 137 KVGVASFDDGRKIAKDYNCQVVGTVDLRMLAHRHSLPSPKSLAALCVQYLD--TEMDKIL 194
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRL 215
++ +N W LT++ + YAA D + + ++H++ ++ K++
Sbjct: 195 EVRCSN---------------WNADSLTNEQISYAAHDAYAAVLIYHQILQKIVQKRS-- 237
Query: 216 LLDNLIYETLFNHV 229
I+E+LF ++
Sbjct: 238 -----IWESLFFYI 246
>gi|410899603|ref|XP_003963286.1| PREDICTED: exosome component 10-like [Takifugu rubripes]
Length = 885
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + ++DT A AL L+ H
Sbjct: 349 LNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLAR----------H 398
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LL + N+ + R W+ RPL +M+ YA +D LL ++ R+
Sbjct: 399 S--LDHLLTHF--------CNVASDKRYQLADWRIRPLPEEMVQYARSDTHYLLYIYDRV 448
>gi|225849884|ref|YP_002730118.1| DNA polymerase I [Persephonella marina EX-H1]
gi|225644858|gb|ACO03044.1| DNA polymerase I [Persephonella marina EX-H1]
Length = 584
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 22 ITDVQEAQSAMATILNESKVGLD-------LEGMDLGVDGKVSLVSLALQNGKIFIFDVY 74
IT + EA ++ + + +D E +D D K+ L+ + KIF++D++
Sbjct: 6 ITQIDEAVKSLEAFKEDKYLFIDTEVAVKSFEDIDFFND-KIRLIQIG-NYSKIFVYDMF 63
Query: 75 SCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
P F L E+LE+ ++ H D L +NF I + V+DT A
Sbjct: 64 RIP--QFSEHLKELLENKGVIG--HNLKFDIKFLKTNFGIFPQIVFDTMIA--------S 111
Query: 135 RLLSQDLVP-HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
+LLS+D H++ Y+++ N+ K+ Q +P W + LT + L YAA D
Sbjct: 112 QLLSEDSREKHSLSALS----YRLTDNHLDKSQQR----SP--WGIKNLTEEQLRYAAKD 161
Query: 194 VESLLALF 201
V+ L +F
Sbjct: 162 VQVLREIF 169
>gi|408418343|ref|YP_006759757.1| ribonuclease D Rnd [Desulfobacula toluolica Tol2]
gi|405105556|emb|CCK79053.1| Rnd: ribonuclease D [Desulfobacula toluolica Tol2]
Length = 377
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 35 ILNESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDR 93
+L E + +DLE + K+ L+ +A + F+ D + I VLE++
Sbjct: 19 LLKEKIIAVDLEADSMHCFKEKICLIQIA-SAKEAFLVDPFEIKKI---SSFLNVLENND 74
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLK 153
++KV HG+ D L ++++++ N++DT+ A L + + L + L+ ++ K
Sbjct: 75 VMKVFHGSDFDIRSLDRDYHVQVNNLFDTEIACRFLGIKERGLAA--LLKRNFDVDADKK 132
Query: 154 FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
F K+ W RPL M+ Y+ DV L+ L
Sbjct: 133 FQKVD------------------WAQRPLKQAMIEYSVGDVAYLVEL 161
>gi|449453692|ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204374 [Cucumis sativus]
Length = 877
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V + RI KV HGA D L +F+I + N++DT A LS P+
Sbjct: 177 LRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEV--LSKPQ--------- 225
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
L LL+ Y N + L RE+ W+ RPL +DM+ YA D LL
Sbjct: 226 -KSLAYLLETYCGVATN-----KMLQRED---WRQRPLPADMVQYARTDAHYLL 270
>gi|448116900|ref|XP_004203126.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359383994|emb|CCE78698.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 757
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 22/140 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
++E+ + +ILKV HGAF D L + + + +++DT A L LS
Sbjct: 291 MNEIFTNPQILKVFHGAFMDIIWLQRDLGLYIVSLFDTYHAAKKLGLS------------ 338
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L LL+ + + K + + W+ RPL+ M YA +D LL ++ +M
Sbjct: 339 KFSLAYLLETFAKFKTSKKYQLAD--------WRLRPLSPAMKAYARSDTHFLLYIYDQM 390
Query: 205 TKEYALKQNRLLLDNLIYET 224
+ L +N L ++YE+
Sbjct: 391 RNK--LLENDGRLQEVLYES 408
>gi|46123343|ref|XP_386225.1| hypothetical protein FG06049.1 [Gibberella zeae PH-1]
Length = 807
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 32 MATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
+ ++ ++ +DLE D G VSL+ ++ + K +I D P L++V
Sbjct: 235 LGELMKAKEIAVDLEHHDFRSYVGLVSLMQISTRE-KDWIVDTLQ-PWRHKLEVLNQVFT 292
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLND 150
+ +I+KV HGA+ D L + + + ++DT F QL+ P L+ + D
Sbjct: 293 NPKIVKVFHGAYMDIIWLQRDLGLYVNGLFDT--FFACGQLNYPAKSLAYLLSKFVDF-D 349
Query: 151 LLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
K Y+++ W+ RPL +ML YA +D LL ++ R+ E
Sbjct: 350 ADKKYQLA-----------------DWRLRPLPQEMLYYARSDTHYLLYIYDRVRNE 389
>gi|452978276|gb|EME78040.1| hypothetical protein MYCFIDRAFT_107101, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 799
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 30/194 (15%)
Query: 19 TNLITDVQEAQSAMATILNESK-VGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSC 76
T + D + A AM L ++K + +DLE D+ G VSL+ ++ ++ K +I D
Sbjct: 228 TATLVDSEVALDAMLKELKQAKEIAIDLEHHDIRTYIGIVSLMQISTRD-KDWIVDT--- 283
Query: 77 PLIMFDGKLH---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
L + KL EV ILKV+HGA+ D L + + L ++DT A AL
Sbjct: 284 -LKPWRRKLQCLNEVFADPNILKVLHGAYMDIIWLQRDLGLYLVGLFDTHHAARALGYP- 341
Query: 134 PRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
L LLK + + + +K Q W+ RPL + YA +D
Sbjct: 342 -----------AGSLAYLLK--RFAGVDAQKKYQTA------DWRVRPLPQALFDYARSD 382
Query: 194 VESLLALFHRMTKE 207
LL +F + E
Sbjct: 383 THYLLYIFDNLRNE 396
>gi|395329712|gb|EJF62098.1| hypothetical protein DICSQDRAFT_59413 [Dichomitus squalens LYAD-421
SS1]
Length = 861
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V I+KV+HGA D L +FN+ + N++DT A L PR H G
Sbjct: 303 VFTDPNIVKVLHGAESDIVWLQQDFNLYIVNLFDTYHASKVLDF--PR--------H--G 350
Query: 148 LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y + + + + W+ RPL +ML YA +D LL ++
Sbjct: 351 LASLLEMYCDFTADKRYQLAD--------WRIRPLPKEMLQYARSDTHFLLFIY 396
>gi|403371484|gb|EJY85623.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 1077
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTA---LQLSDPRLLS--- 138
+ E+ I+K+ HG D L S+ +I + N++DT A+ A L + P+ +
Sbjct: 900 IQEIFVDPSIVKIFHGCDSDIQILASDLDIFVVNLFDTARAYQAIFKLPENAPKHVDLTS 959
Query: 139 -QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESL 197
+ L +G+ L KF+++S W+ RPL M+ YA +D L
Sbjct: 960 LESLCDKFLGIQ-LDKFFQVSD-----------------WRIRPLPQGMMDYARSDSHFL 1001
Query: 198 LALFHRMTKEYALKQNRLLL-DNLIYETLFNHVVPLNIRKRRQF 240
+ L+ + + N + + D L+ E H+ L K+ +F
Sbjct: 1002 IPLYTIFQQILTGQINSVWIKDELLDEEWVGHLKKLANEKKNKF 1045
>gi|115450833|ref|NP_001049017.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|108706273|gb|ABF94068.1| 3'-5' exonuclease family protein, expressed [Oryza sativa Japonica
Group]
gi|113547488|dbj|BAF10931.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|215695202|dbj|BAG90393.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624215|gb|EEE58347.1| hypothetical protein OsJ_09469 [Oryza sativa Japonica Group]
Length = 600
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F+I + N++DT A LQ+ L + L+ H G
Sbjct: 221 KVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQMERNSL--EHLLRHFCG-------- 270
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH----RMTKEYALK 211
++ N K QN W++RPL+ +M+ YA D LL ++ R+ KE +
Sbjct: 271 -VTAN---KEYQNA------DWRSRPLSDEMIKYAREDTHYLLYMYDLMRLRLQKE-STS 319
Query: 212 QNRLLLD 218
N LLL+
Sbjct: 320 DNDLLLE 326
>gi|220917449|ref|YP_002492753.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955303|gb|ACL65687.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
Length = 288
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L E+L R + V+HGA D L + R+ ++DT A A +L P L
Sbjct: 71 LGEILCDGREV-VLHGADYDVRCLHREYGWRIPRLFDTMIA--ARRLGRPGL-------- 119
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
GL+ L++ +F + ++ + W RPLT D L YA+ D LL LF +
Sbjct: 120 --GLSALVE------AHFGVRLSKAFQRS--DWGRRPLTPDQLAYASLDTHFLLPLFDLL 169
Query: 205 TKEYALK 211
T E A +
Sbjct: 170 TGELATR 176
>gi|302776536|ref|XP_002971426.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
gi|300160558|gb|EFJ27175.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
Length = 512
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V + I KVIHG+ D L +F I + N++DT A L++
Sbjct: 289 LRSVFANPSIRKVIHGSDRDILWLQRDFGIYVCNLFDTGQAARVLRM------------E 336
Query: 145 TIGLNDLLK-FYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
GL LL+ F ++P+ R W+ RPL+++ML YA D LL ++ +
Sbjct: 337 RFGLAFLLQTFCGVTPDK---------RYQLADWRLRPLSAEMLKYAREDTHYLLYVYDK 387
Query: 204 M 204
M
Sbjct: 388 M 388
>gi|334310653|ref|XP_001378586.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2
[Monodelphis domestica]
Length = 586
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 13 RTLMNRTNLITDVQEAQSAMATILNESK----VGLDLEGMDL-GVDGKVSLVSLALQNGK 67
R L ++++ +E + + + E + +G+D E +++ G VSL+ +A G
Sbjct: 38 RILRESVVIVSEREEWERVESFLWEELEQCPVLGIDCEWVNVKGKARPVSLLQMASPTGY 97
Query: 68 IFIFDVYSCPLIM-----FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDT 122
+ + P ++ F L ++LE RILKV G + DA LL +++ ++ D
Sbjct: 98 CILIRL---PKLISGEAGFPQTLVDLLEDSRILKVGVGCWEDASKLLREYDLTVRGCLD- 153
Query: 123 QCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPL 182
L + R DL+P+ + L KF + +F + L R + W L
Sbjct: 154 ---LRNLAMRQRR----DLLPNGLSL----KFLAETILSFPLDKSPLLRSS--NWDAEDL 200
Query: 183 TSDMLLYAAADVESLLALFHRMTKEYALKQN 213
T + + YAA D + +ALF + EY L N
Sbjct: 201 TKEQVAYAARDAQISVALFLHLL-EYPLSMN 230
>gi|307212494|gb|EFN88225.1| Exosome component 10 [Harpegnathos saltator]
Length = 804
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
+L+E+ ILKV HGA D L + ++ + N++DT A A QL+ P L
Sbjct: 237 QLNEIFTKPTILKVFHGADFDIQWLQRDLSLYVVNMFDTHQA--AKQLNFPYL------- 287
Query: 144 HTIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
L LLK Y I+PN K+ Q W+ RPL +++ YA D LL +
Sbjct: 288 ---SLAFLLKKYCNINPN---KHFQLA------DWRIRPLPEELMKYAREDTHYLLHI 333
>gi|170575788|ref|XP_001893385.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158600662|gb|EDP37784.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 847
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 71/193 (36%), Gaps = 52/193 (26%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS--DPRLLSQDLV 142
L+E ILKV HGA D L +F I + N++DT A L S + L Q
Sbjct: 330 LNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDTYKAMRVLNFSKFSYQHLVQTCC 389
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
HT+ KF K W+ RPLT YA +D LL +
Sbjct: 390 NHTLD----KKFQKAD------------------WRLRPLTIAHKTYARSDTHYLLHCYD 427
Query: 203 RMTKEYALKQNRLLLDNLI------------------------YETLFNHVVPLNIRKRR 238
++ K ++N +NL+ YE L PLN R+
Sbjct: 428 QLRKRLLSQEN--AANNLLEFVYNESAQTCLTVYKKPKFESDGYEKLLVGRKPLN--SRQ 483
Query: 239 QFRQNQLRRWRKD 251
QF L +WR +
Sbjct: 484 QFALAALWKWRDE 496
>gi|402073127|gb|EJT68752.1| hypothetical protein GGTG_13682 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 261
Score = 43.5 bits (101), Expect = 0.45, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 43 LDLEGMDLGVDGKVS-LVSLALQNGKIFIFDVYSCPLIMFDG------KLHEVLESDRIL 95
+DLEG +L +G + L +L K + DV++ F L +LE +
Sbjct: 8 VDLEGRNLSRNGTLDILTALVRPTKKTSLIDVHTLGDAAFTTANGAGRTLKGILEDPDVP 67
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP-RL--LSQDLVPHTIGLNDLL 152
K DA L S+ +RL V D Q A + + RL LS + H +LL
Sbjct: 68 KYFWDVRNDANALWSHHRVRLAGVTDVQLLENAARRGNKTRLWGLSAAVERHLNPPQELL 127
Query: 153 KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
+ + KK I L R ++ RPLT ++ Y A DV L AL
Sbjct: 128 SPWLQN----KKEIAGLMRAGEDVFSCRPLTDRIVWYCAGDVAHLPAL 171
>gi|449493231|ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101225221 [Cucumis sativus]
Length = 877
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V + RI KV HGA D L +F+I + N++DT A LS P+
Sbjct: 177 LRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEV--LSKPQ--------- 225
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
L LL+ Y N + L RE+ W+ RPL +DM+ YA D LL
Sbjct: 226 -KSLAYLLETYCGVATN-----KMLQRED---WRQRPLPADMVQYARTDAHYLL 270
>gi|358401722|gb|EHK51020.1| hypothetical protein TRIATDRAFT_54696 [Trichoderma atroviride IMI
206040]
Length = 260
Score = 43.5 bits (101), Expect = 0.46, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 20 NLITDVQEAQSAMATILN-----ESKVGLDLEGMDLGVDGKVSLVSLALQ-NGKIFIFDV 73
+++ D A SA+ L + +DLEG++L G +S++ L + K+++ DV
Sbjct: 7 SVLVDTPSALSALIDSLKGLPREPPSIYIDLEGVNLSRHGTISILQLYIHPTNKVYLIDV 66
Query: 74 -------YSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+S P + L ++LES KV D+ L S+F I+L V D Q
Sbjct: 67 LILKEKCFSTPATISPLTLIDILESKSTPKVFFDVRNDSDSLYSHFQIKLAGVVDLQ 123
>gi|24663607|ref|NP_648618.1| CG11263, isoform A [Drosophila melanogaster]
gi|281366175|ref|NP_001163435.1| CG11263, isoform B [Drosophila melanogaster]
gi|7294518|gb|AAF49860.1| CG11263, isoform A [Drosophila melanogaster]
gi|21430260|gb|AAM50808.1| LD32220p [Drosophila melanogaster]
gi|220950120|gb|ACL87603.1| CG11263-PA [synthetic construct]
gi|220959182|gb|ACL92134.1| CG11263-PA [synthetic construct]
gi|272455186|gb|ACZ94706.1| CG11263, isoform B [Drosophila melanogaster]
Length = 265
Score = 43.5 bits (101), Expect = 0.46, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 11 LLRTLMNRTNLITDVQEA-QSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIF 69
+L ++R LI V SA+ I ++ + L +E G S++ +A NG +
Sbjct: 30 ILEKQLDRIVLIYQVDTTYHSALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGT-Y 88
Query: 70 IFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
IFD+ + LI + L ++LE+D+ KVIH + A LL I L ++DT F A+
Sbjct: 89 IFDIKALGLIFLE--LAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDT---FVAV 143
Query: 130 QLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLY 189
LS + L P I L L K++ E+ + RPLT + Y
Sbjct: 144 CLSSNTRIPYTL-PEAISLVFGLPMEKVTGGC----------ESQRNFTARPLTHSQMRY 192
Query: 190 AAADVE 195
A V+
Sbjct: 193 LAKLVQ 198
>gi|395521908|ref|XP_003765056.1| PREDICTED: exosome component 10 [Sarcophilus harrisii]
Length = 992
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A L L H
Sbjct: 459 LNESFTDPAIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARILNLGR----------H 508
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + N Q + W+ RPL +M YA D LL ++ +M
Sbjct: 509 S--LDHLLKLY----CNVETNKQYQLAD----WRIRPLPEEMFNYARHDTHYLLYIYDKM 558
>gi|118582016|ref|YP_903266.1| 3'-5' exonuclease [Pelobacter propionicus DSM 2379]
gi|118504726|gb|ABL01209.1| 3'-5' exonuclease [Pelobacter propionicus DSM 2379]
Length = 382
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 20 NLITDVQEAQSAMATILNESKVGLDLEGMDL--GVDGKVSLVSLALQNGKIFIFDVYSCP 77
+ITD +I +E +V +DLE MD KV L+ ++ + + ++ D P
Sbjct: 12 EMITDGGRLAEVAGSINSEREVAVDLE-MDSLHHYREKVCLIQISTRT-ESWLID----P 65
Query: 78 LIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRL 136
L + D L L + IL V+HGA D L + I + N++DT A L +++
Sbjct: 66 LALKDLSPLAAPLGNRDILIVMHGADYDIRSLHRDHGIEVTNLFDTMIASRLLGITE--- 122
Query: 137 LSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVES 196
GL LLK F + Y++ W RPL+ +M YA AD
Sbjct: 123 ---------FGLAALLK------ARFGIELNKKYQKAD--WSKRPLSPEMRAYAVADTAD 165
Query: 197 LLALFHRMTKEYALKQNRL 215
LL L+ M ++ L++ RL
Sbjct: 166 LLRLYD-MLRDELLEKGRL 183
>gi|195451328|ref|XP_002072866.1| GK13832 [Drosophila willistoni]
gi|194168951|gb|EDW83852.1| GK13832 [Drosophila willistoni]
Length = 913
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 2 EAKCQPQNNLLRTLMNRTNL--ITDVQEAQSAMATILNESKVGLDLEGMD----LGVDGK 55
+ + Q Q+ L M T L + ++++ Q A+ + S++ +D+E +G+
Sbjct: 265 QGQMQTQSPELPASMGNTELMLVDNLEKLQQAVKELSEASQIAIDVEHHSYRTFMGITCL 324
Query: 56 VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESD-RILKVIHGAFGDAGGLLSNFNI 114
V + + + K +IFD ++ D +L ++ +D + LK++HGA D L + ++
Sbjct: 325 VQMSTCS----KDYIFDTL---VLREDMQLLNLVMTDPKKLKILHGADLDIEWLQRDLSL 377
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
+ N++DT A AL ++ RL L+ H + L D+ K +++
Sbjct: 378 YIVNMFDTHRAAKALNMA--RLSLAFLLKHYVDL-DVDKSLQLA---------------- 418
Query: 175 HIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
W+ RPL +++ YA D L+ ++ +T +
Sbjct: 419 -DWRMRPLPQELINYARQDTHYLIYVYQCLTND 450
>gi|170109177|ref|XP_001885796.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639376|gb|EDR03648.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 250
Score = 43.5 bits (101), Expect = 0.50, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKI-FIFDVYSCPLIMFD-----GK-LHEVLESDR 93
+ +DLEG++L GK+S++ + ++ ++ DV + FD G+ L +LE
Sbjct: 35 LAVDLEGINLCRHGKISIIQIMSSVSEVVWLVDVTTLGSQAFDHVGPYGRTLRMILEDTG 94
Query: 94 ILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDL-- 151
I KV + DA L + + + L VYD Q A++ S R HT LN L
Sbjct: 95 IKKVFYDVRNDADALYNLYGVNLTGVYDLQLLELAVRHSLRR--------HTKFLNGLGK 146
Query: 152 -LKFYKISPNNFK-------KNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
+ Y P ++ + Q + + +++ RPL ++ Y A DV L L
Sbjct: 147 SITSYLTPPTEWEPIKQAGLRLFQPDFGGSYSVFEDRPLDPRIVAYCAQDVTLLFELEET 206
Query: 204 MTKEYA 209
+ + +
Sbjct: 207 LRRSFG 212
>gi|389585849|dbj|GAB68579.1| POM1 [Plasmodium cynomolgi strain B]
Length = 1882
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 37 NESKVGLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
N + GLD+E L V D K+ L+ +A+++ + I+D+++ L E+L +++++
Sbjct: 1329 NVTYCGLDIETTGLEVFDEKIRLIQIAVEDYPVIIYDMFNITRESILSGLREILRNEKVV 1388
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLL-KF 154
K+I DA L+ N N + N++DT A +LL ++ + LN+++ K+
Sbjct: 1389 KIIQNGKFDAKFLMHN-NFEVNNIFDTYIA--------SKLLDKNKNMYGFKLNNIVEKY 1439
Query: 155 YKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAAD 193
++ K QN +W L ++ L YAA D
Sbjct: 1440 LNVT---LDKQQQN------SVWNNSLLNNNQLFYAARD 1469
>gi|146101398|ref|XP_001469106.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073475|emb|CAM72206.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 412
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVD------GKVSLVSLALQNGKI-FIFDV 73
+I+ QE + A+ + ++ +D+E G+VSLV + F+FDV
Sbjct: 85 VISTEQELKEAVGVLQRSRQIAIDVEAFCTPEAIKTPQLGRVSLVQTCSDVVPVVFLFDV 144
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
S + +F L V + I K+ D L + ++ K V D Q FTALQ
Sbjct: 145 LSLSVPVFMQALRPVFHDETIRKLFFDCRRDIEALSTQMDLTPKRVLDLQLLFTALQW-- 202
Query: 134 PRLLSQDLVPHTIGLNDLLK-FYKISPNNFKKNIQN--LYRENPHIWKTRPLTSDMLLYA 190
+L S V G+ +LK I +Q + + P +W TRPL L YA
Sbjct: 203 -KLRS---VNRRSGMTYVLKSVAGIHRQEGDSAVQTAMMVGDRP-VWDTRPLPEHFLEYA 257
Query: 191 AADV 194
A DV
Sbjct: 258 ADDV 261
>gi|425065567|ref|ZP_18468687.1| Ribonuclease D [Pasteurella multocida subsp. gallicida P1059]
gi|404383943|gb|EJZ80388.1| Ribonuclease D [Pasteurella multocida subsp. gallicida P1059]
Length = 383
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
+L + +LKV+H D +FN + DTQ L P++ G
Sbjct: 80 LLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQIMANFLGF-----------PNSTG 128
Query: 148 LNDLLKFYKISPNNFKKNI-QNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
L L++ N F+ I + R + W RPL+ + L+YAAADV LL L+ RM +
Sbjct: 129 LATLVQ------NYFQLEIDKGASRTD---WLARPLSDNQLIYAAADVWYLLPLYQRMQE 179
Query: 207 EYALKQNR 214
AL Q R
Sbjct: 180 --ALAQTR 185
>gi|345327688|ref|XP_003431189.1| PREDICTED: exosome component 10 [Ornithorhynchus anatinus]
Length = 864
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + N++DT A RLL +L H
Sbjct: 325 LNESFTDPSIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAA--------RLL--NLGRH 374
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+ L+ LLK Y N + + Q + W+ RPL +ML YA D LL ++ +M
Sbjct: 375 S--LDYLLKHY----CNVEADKQYQLAD----WRIRPLPREMLNYARDDTHYLLFVYDKM 424
>gi|108805947|ref|YP_645884.1| DNA-directed DNA polymerase [Rubrobacter xylanophilus DSM 9941]
gi|108767190|gb|ABG06072.1| DNA-directed DNA polymerase [Rubrobacter xylanophilus DSM 9941]
Length = 582
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 41 VGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIH 99
VGLD+E L +D ++ L+ LA G+ F+ DV+ + L E LE LKV+H
Sbjct: 30 VGLDIEATGLSPLDARMRLLQLA-AGGETFVVDVFEVKDL---SPLREALEGG-PLKVLH 84
Query: 100 GAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISP 159
A D LL+ IRL ++DT A QL D + P ++
Sbjct: 85 NAKYDYSFLLAQHGIRLSPLFDT---MLAAQLLD----GGEQGPS-------YSLEAVAG 130
Query: 160 NNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
++ + R W ++ L+ + L YAA D LL L R+ +
Sbjct: 131 RYLQETVDKTARRED--W-SKELSREQLEYAARDAAILLPLHERLQE 174
>gi|449493604|ref|XP_004159371.1| PREDICTED: transcription factor Pur-alpha 1-like [Cucumis sativus]
Length = 156
Score = 43.5 bits (101), Expect = 0.55, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 39 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGIPWFLDLFNYYINS--- 94
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
D + S+ L DT+ ++ D+ +N R RF+ I
Sbjct: 95 -------DDPEVFSKELQLDTKVFYFDIGENRRGRFLKI 126
>gi|354544046|emb|CCE40768.1| hypothetical protein CPAR2_108030 [Candida parapsilosis]
Length = 771
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 19 TNLITDVQEAQSAMATILNES-KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSC 76
+ + D E + M L +S ++ +DLE D G V L+ ++ K +I D
Sbjct: 227 SAIWVDTTEGLNKMIDELQQSTEIAVDLEHHDYRSYYGIVCLMQIS-NREKDWIIDT--- 282
Query: 77 PLIMFD--GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDP 134
L++ D L++V +I+KV+HGAF D L + + + +++DT A L S
Sbjct: 283 -LVLRDDLSVLNKVFTDPKIIKVLHGAFMDIIWLQRDLGLYIVSLFDTYHASRQLGFS-- 339
Query: 135 RLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
L LL + + K + + W+ RPL ML YA +D
Sbjct: 340 ----------KFSLQYLLDTFAHFRTSKKYQLAD--------WRIRPLPKPMLAYARSDT 381
Query: 195 ESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLR 246
LL +F ++ +N+L+ + + + LF+ + KRR F + R
Sbjct: 382 HFLLYIFDQL-------RNKLIDSDKLAQVLFDS---RQVAKRR-FEYTKFR 422
>gi|3831454|gb|AAC69936.1| hypothetical protein [Arabidopsis thaliana]
Length = 237
Score = 43.5 bits (101), Expect = 0.56, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 26/130 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V I KV HGA D L +F+I + N++DT A LS P+ L+
Sbjct: 119 LRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEV--LSKPQRSLAYLLET 176
Query: 145 TIGL--NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
G+ N LL+ RE+ W+ RPL+ +M+ YA D LL +
Sbjct: 177 VCGVATNKLLQ-----------------RED---WRQRPLSEEMVRYARTDAHYLLYIAD 216
Query: 203 RMTKEYALKQ 212
+T E LKQ
Sbjct: 217 SLTTE--LKQ 224
>gi|91205505|ref|YP_537860.1| ribonuclease D [Rickettsia bellii RML369-C]
gi|157827220|ref|YP_001496284.1| ribonuclease D [Rickettsia bellii OSU 85-389]
gi|91069049|gb|ABE04771.1| Ribonuclease D [Rickettsia bellii RML369-C]
gi|157802524|gb|ABV79247.1| Ribonuclease D [Rickettsia bellii OSU 85-389]
Length = 286
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFN 113
K+S++ + + I I + + L +F+ ++L + I+K+ H D + F
Sbjct: 37 AKLSIIQVKAEGCSIIIDAINNLDLNVFN----KLLIDNNIIKIFHAPREDFEIFYNLFK 92
Query: 114 IRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYREN 173
N++D Q A + GL L + I FK NI ++++
Sbjct: 93 TLPSNIFDVQVA-----------------ANVCGLGSQLSYDDICYKLFKINIDKTHQKS 135
Query: 174 PHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLI---YET----LF 226
W RP+T DML YA DVE L ++ ++ N+++LDN + Y++ LF
Sbjct: 136 N--WLKRPITEDMLNYAFLDVEYLDKIYKQL--------NKIILDNNLTNQYQSMLQFLF 185
Query: 227 N----HVVPLNIRKRRQFR 241
N V P + K+ +FR
Sbjct: 186 NIKNYEVKPEDAWKKVKFR 204
>gi|363750290|ref|XP_003645362.1| hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888996|gb|AET38545.1| Hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
Length = 747
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E+ ILKV HGAF D L + + + +++DT A AL P+ H
Sbjct: 279 LNEIFTDPSILKVFHGAFMDIIWLQRDLGLYVVSLFDTYHASRALGF--PK--------H 328
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
++ LL+ + NFK + + + W+ RPL+ M YA AD LL ++ ++
Sbjct: 329 SLAY--LLETFA----NFKTSKKYQLAD----WRIRPLSKPMKTYARADTHFLLNIYDKL 378
>gi|325183710|emb|CCA18169.1| exosome complex exonuclease RRP6like protein putativ [Albugo
laibachii Nc14]
Length = 770
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 14 TLMNRTNLITDVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIF 71
+L + L D ++ M IL E+ + +DLE + G L+ ++ N F+
Sbjct: 216 SLQKASFLWVDSADSFQQMLLILQEAHALAIDLEHHNYRSYLGLTCLMQISTHNHD-FLV 274
Query: 72 DVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
D + + L++V + LKV+HGA D L + + + N++DT A LQL
Sbjct: 275 DTLALRSSL--QLLNQVFCDPQKLKVLHGADMDILWLQRDLGLYVVNMFDTGRAARVLQL 332
Query: 132 SDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAA 191
PR L+ + + K Y+++ W+ RPLT +M YA
Sbjct: 333 --PRFSLAYLLKKCCDI-EADKQYQLAD-----------------WRQRPLTEEMTRYAR 372
Query: 192 ADVESLLALFHRMTKEYALKQN 213
D LL ++ +M +E LK +
Sbjct: 373 EDTRYLLFIYRKMKEELLLKSD 394
>gi|342179232|sp|A6V8R6.2|RND_PSEA7 RecName: Full=Ribonuclease D; Short=RNase D
Length = 376
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 27/156 (17%)
Query: 77 PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
PL++ D G E+LE R++KV+H D L ++DTQ A L ++
Sbjct: 62 PLLVRDWGPFAELLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMA--- 118
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
H++G + L+K ++ + K+ E W RPLT + YAA DV+
Sbjct: 119 --------HSMGYSKLVK--EVLDIDLPKD------ETRSDWLQRPLTEMQMRYAADDVQ 162
Query: 196 SL----LALFHRMTKE---YALKQNRLLLDNLIYET 224
L LAL R+++E + L+ L+ NL E+
Sbjct: 163 HLAQVYLALDARLSEEKRAWLLEDGAELVANLCRES 198
>gi|384171974|ref|YP_005553351.1| putative 3'-5' exonuclease [Arcobacter sp. L]
gi|345471584|dbj|BAK73034.1| putative 3'-5' exonuclease [Arcobacter sp. L]
Length = 220
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 14 TLMNRT-NLITDVQEAQSAMATILNESKVGLDLEGMDL----GVDGKVSLVSLALQNGKI 68
T+ NRT ++ ++ ++ M +I +G D E D V L+ LA ++ K
Sbjct: 24 TIGNRTIEVVNTSEQLENVMNSIQLTPFIGFDSEQKPTFKKGQADNGVCLIQLATKD-KC 82
Query: 69 FIFDVYSC----PLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
F+ + PLI F LE D+I+K+ G GD L FN+R+K++ D +
Sbjct: 83 FLIQIKQIKNLKPLINF-------LEDDKIIKIGTGLKGDNEALFKQFNLRVKSMIDLED 135
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
F L + IG K I N + +N+ R N W+ + L+S
Sbjct: 136 IFKKLS-----------SKNQIGAK---KAASIILNKKLQKSKNMSRSN---WENKELSS 178
Query: 185 DMLLYAAADVESLLALFHRMTKEYAL 210
+ YA+ D + + ++ ++Y
Sbjct: 179 GQIKYASEDATVVYDVMDKILEQYPF 204
>gi|398392757|ref|XP_003849838.1| hypothetical protein MYCGRDRAFT_17511, partial [Zymoseptoria
tritici IPO323]
gi|339469715|gb|EGP84814.1| hypothetical protein MYCGRDRAFT_17511 [Zymoseptoria tritici IPO323]
Length = 239
Score = 43.1 bits (100), Expect = 0.65, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 34 TILNESKVGLDLEGMDLGVDGKVSLVSLALQNGK-IFIFDVYSCPLIMF-----DGK-LH 86
T+ ++ +DLEG DL G +SL+++ L+ K +++ D+ + F +G+
Sbjct: 17 TLGQPPRLYMDLEGNDLSRAGTLSLITILLEPEKDVYLIDITTLGQKAFSTADDNGRTFK 76
Query: 87 EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV---- 142
V+ES I+KV D+ L S + +R+ + D Q ++L+ R S+ V
Sbjct: 77 SVMESPDIIKVFFDIRNDSDALYSLYRVRVAGIEDLQL----MELAS-RNFSKKCVNGLA 131
Query: 143 -----PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADV 194
HTIG + ++ + + +K + ++ RPL+ DM Y A DV
Sbjct: 132 KCIDGDHTIGHAEKRQWQTVK-DQGRKLFDPARGGSYSVFDQRPLSEDMKQYCAQDV 187
>gi|315054289|ref|XP_003176519.1| exosome component 3'-5' exonuclease [Arthroderma gypseum CBS
118893]
gi|311338365|gb|EFQ97567.1| exosome complex exonuclease RRP6 [Arthroderma gypseum CBS 118893]
Length = 827
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV+HG+ D L + + L ++DT A + LQL P+ + L+
Sbjct: 316 LNEVFADPSIVKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASVLQL--PKKSLKFLLHE 373
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
+G D K Y+ + W+ RPL + ML YA +D LL +F R+
Sbjct: 374 YVGF-DADKKYQTAD-----------------WRIRPLLTGMLDYARSDTHFLLYIFDRL 415
Query: 205 TKE 207
E
Sbjct: 416 RNE 418
>gi|440907539|gb|ELR57678.1| Werner syndrome ATP-dependent helicase [Bos grunniens mutus]
Length = 1430
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 41 VGLDLE---GMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E G +V+L+ L + K ++F + S + F L +LE++ I K
Sbjct: 77 VGFDIEWPPAYKKGTLSRVALIQLCVAESKCYLFHISS--MSGFPQGLKMLLENEAIKKA 134
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G D LL +F+I LK++ + T A L+ + T LN L+K+
Sbjct: 135 GVGIEQDQWKLLRDFDINLKSIVELTDVANEKLKCIE-----------TWSLNGLVKYL- 182
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
F K + W PLT D +YAA D + ++ ++
Sbjct: 183 -----FGKQLLKDRSIRCSNWSRFPLTEDQKVYAATDAYAGFIIYQKLA 226
>gi|156059756|ref|XP_001595801.1| hypothetical protein SS1G_03891 [Sclerotinia sclerotiorum 1980]
gi|154701677|gb|EDO01416.1| hypothetical protein SS1G_03891 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 268
Score = 43.1 bits (100), Expect = 0.66, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 22 ITDVQEAQSAMATILNES-------KVGLDLEGMDLGVDGKVSLVSLA-LQNGKIFIFDV 73
+TD EA + +L S V +DLEG+ +G +G +S++ + L + F+ DV
Sbjct: 24 LTDTPEAIIKLIDLLARSDIPTVPPSVYIDLEGIKIGRNGSISILQVYFLPTKESFLVDV 83
Query: 74 YSCPLIMFDG------KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
++ F L +LES I KVI D+ L S+F I+L V D Q
Sbjct: 84 HTLRERTFSTPNKSGVTLKSILESQLIPKVIFDVRNDSDALYSHFGIKLGGVIDLQ 139
>gi|39995551|ref|NP_951502.1| ribonuclease D [Geobacter sulfurreducens PCA]
gi|39982314|gb|AAR33775.1| ribonuclease D, putative [Geobacter sulfurreducens PCA]
Length = 381
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 25/196 (12%)
Query: 20 NLITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSLALQNGKIFIFDVYSCPL 78
+IT V + + +E V DLE + KV L+ A+ G I D + P
Sbjct: 9 EIITTVDGVRRLADRLGSEPIVACDLEADSMHHYQEKVCLIQFAV-PGYAAIVDPLAAPD 67
Query: 79 IMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLS 138
I L + + I KV HGA D L +F I + N++DT A
Sbjct: 68 I---SPLAPLFANAAIRKVFHGADYDIRSLHRDFGIEVNNLFDTMIA------------C 112
Query: 139 QDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL 198
Q L GL L+ F + Y+ W RPLT M+ YA D L+
Sbjct: 113 QLLGEREFGLAAQLR------KRFGVELDKQYQRA--DWSRRPLTVGMIEYAVKDTTLLI 164
Query: 199 ALFHRMTKEYALKQNR 214
L+ ++ E K R
Sbjct: 165 ELYRQLVAELEEKGRR 180
>gi|395761651|ref|ZP_10442320.1| 3'-5' exonuclease [Janthinobacterium lividum PAMC 25724]
Length = 215
Score = 43.1 bits (100), Expect = 0.71, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 41 VGLDLEGMDLGVDGKVS----LVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILK 96
+G D E V G+ S L+ LA + ++F V S P + +L +LES +K
Sbjct: 42 IGFDTESKPTFVKGESSTGPHLIQLATDD-IAYLFQVGSAPALAL-AELKAILESTTTIK 99
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
V G D L + I V D A Q +D L ++ V GL+ L K K
Sbjct: 100 VGFGLSDDVKRLRNKLGIAPAQVLDLSVALRGGQRND--LGAKTAVAKFFGLH-LQKSKK 156
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
IS N W T LT +LYAA D + L ++ R
Sbjct: 157 ISTTN---------------WATSRLTEKQILYAADDAQVALRVYRR 188
>gi|152985900|ref|YP_001349451.1| ribonuclease D [Pseudomonas aeruginosa PA7]
gi|150961058|gb|ABR83083.1| ribonuclease D [Pseudomonas aeruginosa PA7]
Length = 393
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 27/156 (17%)
Query: 77 PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPR 135
PL++ D G E+LE R++KV+H D L ++DTQ A L ++
Sbjct: 79 PLLVRDWGPFAELLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMA--- 135
Query: 136 LLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVE 195
H++G + L+K ++ + K+ E W RPLT + YAA DV+
Sbjct: 136 --------HSMGYSKLVK--EVLDIDLPKD------ETRSDWLQRPLTEMQMRYAADDVQ 179
Query: 196 SL----LALFHRMTKE---YALKQNRLLLDNLIYET 224
L LAL R+++E + L+ L+ NL E+
Sbjct: 180 HLAQVYLALDARLSEEKRAWLLEDGAELVANLCRES 215
>gi|168005501|ref|XP_001755449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693577|gb|EDQ79929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 824
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 9 NNLLRTLMNRTNLITDVQEAQSAMATIL-NESKVGLDLEGMDL-GVDGKVSLVSLALQNG 66
+N+L M L + A+ +L E ++G+D+E + G + L+ ++ +
Sbjct: 55 DNVLPPGMEGPCLWVQTRSQLEALVDVLKGEKEIGVDIEHHHVRSFRGFIPLIQISTYST 114
Query: 67 KIFIFDVYSCPLIMFDGK--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQC 124
++ D + + D LH + + ILK+ HGA D+ L +F+I + N++DT
Sbjct: 115 D-YLVDA----IALHDDMHLLHPIFANPAILKIFHGADNDSLWLQRDFHIYIVNLFDTAR 169
Query: 125 AFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTS 184
A L P+ L LL+ Y + + +Y+ + W+ RPL +
Sbjct: 170 ACDVL--GKPQR----------SLAYLLQLY------CGVSTKKIYQRSD--WRVRPLPA 209
Query: 185 DMLLYAAADVESLL 198
+M +YA D LL
Sbjct: 210 EMEIYARTDAHYLL 223
>gi|449499575|ref|XP_002193489.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Taeniopygia guttata]
Length = 1497
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 34 TILNESKVGLDLEGMDLGVDG---KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
++ + + VG D+E G K +++ + + K ++F V S + F L +LE
Sbjct: 149 SLSDGAAVGFDIEWPPAYTKGRMAKTAVIQMCVTEDKCYLFHVSS--MAGFPKGLKRLLE 206
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLN 149
+ I KV G GD L+S+F I+LK+ + A L+ + L+ LV H G
Sbjct: 207 DETIKKVGVGIEGDQWKLMSDFEIKLKSFVELADVANEKLKCKETWSLN-GLVKHLFG-R 264
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK + +N W+ PL + LYAA D + ++ ++
Sbjct: 265 QLLKDQSVRCSN---------------WEQFPLNEEQKLYAATDAYAGYIVYEKL 304
>gi|374812628|ref|ZP_09716365.1| 3'-5' exonuclease [Treponema primitia ZAS-1]
Length = 282
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 37 NESKVGLDLEG-MDLGVDG-KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRI 94
N K+ +D EG +L G K+ L+ + K FI D PL + + +L E+ +I
Sbjct: 24 NIDKISMDFEGDYNLHAYGEKLCLIQI-FDGKKYFIID----PLKIRNEELINFFENKKI 78
Query: 95 LKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKF 154
+K ++G D + + I+L NV+D + L++ +P+ GL+ +LK
Sbjct: 79 VKYMYGTESDISLIYKQYGIKLNNVFDQKILVDLLEI-EPK-----------GLDAILK- 125
Query: 155 YKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNR 214
S N + I+N R W RP+ + L YA DV L + N
Sbjct: 126 ---SVLNIE--IKNKKRFQMFNWLKRPIDKEALEYALNDVAHLFQI------------NT 168
Query: 215 LLLDNLIYETLFNHVVPLNIRKRRQFRQNQL 245
+L+ +I E +N +V I++ +F + ++
Sbjct: 169 ILMKRIIDENKYNDLVLSIIKRDFEFEKERI 199
>gi|326918448|ref|XP_003205500.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Meleagris gallopavo]
Length = 1569
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 34 TILNESKVGLDLEGMDLGVDGK---VSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLE 90
T+ + + VG D+E GK ++++ + + K ++F + S + F L +LE
Sbjct: 153 TLSDGAAVGFDIEWPPSYAKGKMAKIAVIQICVTKEKCYLFHISS--MSGFPKGLKRLLE 210
Query: 91 SDRILKVIHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLN 149
+ I K G GD L+S+F ++LK+ + A L+ + L+ LV H G
Sbjct: 211 DETIKKAGVGIEGDHWKLMSDFEVKLKSFVELADVANEKLKCKEVWSLN-GLVKHLFG-K 268
Query: 150 DLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK I N W+ PL + LYAA D + L ++ ++
Sbjct: 269 QLLKDKSIRCGN---------------WEKFPLDEEQKLYAATDAYAGLIIYQKL 308
>gi|406606562|emb|CCH42061.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 744
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 37/210 (17%)
Query: 39 SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK-LHEVLESDRILK 96
S++ +DLE D G V L+ ++ ++ + ++ D + + D K L+ V +I K
Sbjct: 237 SEIAVDLEHHDYRSYYGLVCLMQISTRD-QDWLIDTLA---LREDLKILNSVFTDPKITK 292
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
V HGAF D L + + + +++DT A + QL P+ H++ LL+ +
Sbjct: 293 VFHGAFMDIIWLQRDLGLYIVSLFDTYHA--SRQLGFPK--------HSLAY--LLERFA 340
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLL 216
+ K + + W+ RPLT M LYA +D LL +F ++ + ++ N+L
Sbjct: 341 HFKTSKKYQLAD--------WRIRPLTGPMKLYARSDTHFLLNIFDQL-RNMLIESNKLT 391
Query: 217 LDNLIYETLFNHVVPLNIRKRRQFRQNQLR 246
N+++E+ N+ +RR F + R
Sbjct: 392 --NVLFES-------RNVARRR-FEYSSFR 411
>gi|156039491|ref|XP_001586853.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980]
gi|154697619|gb|EDN97357.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV HGA+ D L + + + ++DT A L L+ L
Sbjct: 288 LNEVFADPCIIKVFHGAYMDIVWLQRDLGLYVVGLFDTHYACRRLGLAGGSLAF------ 341
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK Y + K + + W+ RPL +M YA AD LL +F +
Sbjct: 342 ------LLKKYIDFDADKKYQLAD--------WRIRPLPEEMFFYARADTHFLLYIFDNL 387
Query: 205 TKE 207
E
Sbjct: 388 RNE 390
>gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
Length = 1449
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V + I KV HGA D L +F+I + N++DT A L P+
Sbjct: 824 LRPVFANASICKVFHGADSDILWLQRDFHIYVVNLFDTARACDVL--GKPQR-------- 873
Query: 145 TIGLNDLLKFY-KISPNN-FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
L LL+ Y IS N F+K+ W+ RPL D+LLYA +D LL +
Sbjct: 874 --SLAYLLQTYCNISTNKAFQKSD----------WRQRPLPEDILLYARSDAHFLLYIAR 921
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKR 237
++ E + L L T +H++ L + ++
Sbjct: 922 KLYSELLQGETDLANAPLQMATRRSHLICLQLYEK 956
>gi|167628093|ref|YP_001678593.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167598094|gb|ABZ88092.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 366
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 55 KVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNI 114
++ LV +A +N +IF+ D + + F KL ++ E I K+IH A D + F+
Sbjct: 37 ELCLVQIATEN-EIFLID--TLEDLDF-SKLKDIFEDTNIQKIIHSATNDIPIIKRFFDC 92
Query: 115 RLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENP 174
+ N++DTQ A + L +Q + L D+L + F
Sbjct: 93 EVNNIFDTQLAASFLG-------TQSQISLKALLKDILDIEMEKESQFSD---------- 135
Query: 175 HIWKTRPLTSDMLLYAAADVESLLAL-FHRMTK 206
W+ RPL+ YA DV+ L+ + +H +K
Sbjct: 136 --WRKRPLSQKQFDYALKDVKHLIEIKYHLESK 166
>gi|112491261|pdb|2HBJ|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain
gi|112491264|pdb|2HBK|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn
gi|112491267|pdb|2HBL|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn, Zn, And Amp
gi|112491277|pdb|2HBM|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn, Zn, And Ump
Length = 410
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 52/260 (20%)
Query: 27 EAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
E +S + + N ++ +DLE D G V L+ ++ + + ++ D + L
Sbjct: 95 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRE-RDYLVDT-----LKLRENL 148
Query: 86 H---EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
H EV + I+KV HGAF D L + + + ++DT A A+ L PR
Sbjct: 149 HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGL--PR------- 199
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
H++ LL+ + NFK + + + W+ RPL+ M A AD LL ++
Sbjct: 200 -HSLAY--LLENFA----NFKTSKKYQLAD----WRIRPLSKPMTAAARADTHFLLNIYD 248
Query: 203 RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYI 262
++ +N+L+ N + L+ N+ KRR F ++ R L S Y I
Sbjct: 249 QL-------RNKLIESNKLAGVLYES---RNVAKRR-FEYSKYR----PLTPSSEVYSPI 293
Query: 263 EEVNSNEYIWR---NDYNVP 279
E+ E W+ YN+P
Sbjct: 294 EK----ESPWKILMYQYNIP 309
>gi|406962736|gb|EKD89001.1| hypothetical protein ACD_34C00239G0001 [uncultured bacterium]
Length = 380
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 41/218 (18%)
Query: 3 AKCQPQNNLLRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSL 61
A C+P +N + +T+ A + ++S++ +D E L KV L+ +
Sbjct: 4 APCKPA-----VWVNSSQGLTE------AFQALESQSRIAVDTESNSLFSYQEKVCLIQI 52
Query: 62 ALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYD 121
+ F+FD + + G L ++ + K+ H + D L +++ + N++D
Sbjct: 53 SSPETD-FVFDPFEFSDLSLLGSL---FQNPKQEKIFHASEYDLICLKRDYHFKFINIFD 108
Query: 122 TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLY-RENPHIWKTR 180
T A S+ L +GL LL+ N F N+ Y R N W R
Sbjct: 109 TMIA------------SRILGAPQVGLGSLLQ------NYFDINLDKKYQRAN---WGLR 147
Query: 181 PLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLD 218
PL +ML YA D L L R+ E + N LLD
Sbjct: 148 PLPPEMLDYARLDTYYLFKLRDRLESELS---NHGLLD 182
>gi|146421793|ref|XP_001486840.1| hypothetical protein PGUG_00217 [Meyerozyma guilliermondii ATCC
6260]
Length = 755
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E+ + I+KV HGAF D L + + + +++DT A L L PR
Sbjct: 289 LNEIFANPNIVKVFHGAFMDIIWLQRDLGLYVVSLFDTYHASKKLGL--PRF-------- 338
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L LL+ Y NFK + + + W+ RPL ML YA +D LL ++ ++
Sbjct: 339 --SLAYLLENYA----NFKTSKKYQLAD----WRMRPLLGPMLSYARSDTHFLLYVYDQL 388
>gi|389749306|gb|EIM90483.1| hypothetical protein STEHIDRAFT_51034 [Stereum hirsutum FP-91666
SS1]
Length = 208
Score = 42.7 bits (99), Expect = 0.91, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLG-VDGKVSLVSL-------------ALQNG 66
L D SA+A + + + D EG+ LG V G +SL+++ +NG
Sbjct: 8 LCDDRASFTSAVAALSSSRTLYFDCEGVKLGTVGGTLSLITVRSAPFHSNSRQSDGDRNG 67
Query: 67 KIFIFDVYSCPLI---MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ FIFD+ S L + L +L S ++LKV+ D+ L F + L+NV D Q
Sbjct: 68 QTFIFDITSLTLTHQPVSLKPLFALLTSPKVLKVVWDGRMDSSALHHYFRVDLRNVLDLQ 127
>gi|325972527|ref|YP_004248718.1| 3'-5' exonuclease [Sphaerochaeta globus str. Buddy]
gi|324027765|gb|ADY14524.1| 3'-5' exonuclease [Sphaerochaeta globus str. Buddy]
Length = 294
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 31/148 (20%)
Query: 68 IFIFDVYSCPLIMFDGK--------------LHEVLESDRILKVIHGAFGDAGGLLSNFN 113
+ I+ + C + +FDG L LE +LKV+ D+ + ++
Sbjct: 38 LHIYGEHLCLIQLFDGSAYALVDPFTLSKEALKAFLEDASLLKVMFDCASDSALVRKQYD 97
Query: 114 IRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG-LNDLLKFYKISPNNFKKNIQNLYRE 172
I L VYD + A AL IG L L++ Y P K N+ + +
Sbjct: 98 ILLDGVYDIRIAALALGY--------------IGNLTGLVERY--IPEAEKPNLSSKKKN 141
Query: 173 NPHIWKTRPLTSDMLLYAAADVESLLAL 200
W RPL SD + YA +DVE LL L
Sbjct: 142 QMTNWLIRPLKSDQIEYALSDVEHLLVL 169
>gi|94500848|ref|ZP_01307374.1| ribonuclease D [Bermanella marisrubri]
gi|94426967|gb|EAT11949.1| ribonuclease D [Oceanobacter sp. RED65]
Length = 382
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 83 GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
G L EVL + ++KV+H D SN + + DTQ A A+ D + Q LV
Sbjct: 72 GPLIEVLSNQNVVKVLHSPSEDFDAFYSNLGVVPSPIIDTQWA-AAMASIDGIMGYQKLV 130
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
+ + DL K S W RPLT + + YAA DVE LL +
Sbjct: 131 KQLLDI-DLEKGATRSD-----------------WLQRPLTDEQIHYAADDVEHLLEITK 172
Query: 203 RM 204
R+
Sbjct: 173 RL 174
>gi|150951537|ref|XP_001387875.2| exosome component 3'-5' exonuclease [Scheffersomyces stipitis CBS
6054]
gi|149388676|gb|EAZ63852.2| ribosomal RNA processing 3'-5' exonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 792
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 28/183 (15%)
Query: 25 VQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDG 83
V+E Q + + S++ +DLE D G V L+ ++ ++ + +I D L + D
Sbjct: 239 VEELQKMVEELKKSSEIAVDLEHHDYRSYYGIVCLMQISNRD-QDWIIDT----LALRDD 293
Query: 84 K--LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
L+ V + I+KV HGAF D L + + + +++DT A +L P+
Sbjct: 294 LECLNTVFTNPHIVKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASKSLGF--PKF----- 346
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ + +FK + + + W+ RPL+ M+ YA +D LL++F
Sbjct: 347 -----SLAYLLETFA----HFKTSKKYQLAD----WRIRPLSPPMMAYARSDTHFLLSIF 393
Query: 202 HRM 204
++
Sbjct: 394 DQL 396
>gi|147797616|emb|CAN65003.1| hypothetical protein VITISV_023489 [Vitis vinifera]
Length = 393
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL----HEVLESDRILK 96
+G D EG+DL G + ++ LA + I++ D I KL LES I K
Sbjct: 57 IGFDCEGVDLCRHGSLCIMQLAFPD-AIYLVDA-----IQGGEKLMKACKPALESSYITK 110
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
VIH D+ L F I+L NV D+Q
Sbjct: 111 VIHDCKRDSEALYFQFGIKLHNVVDSQ 137
>gi|330802281|ref|XP_003289147.1| hypothetical protein DICPUDRAFT_153473 [Dictyostelium purpureum]
gi|325080770|gb|EGC34311.1| hypothetical protein DICPUDRAFT_153473 [Dictyostelium purpureum]
Length = 1045
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 40 KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
+ +DLE + G V L+ ++ + G+ FI D + L L+ V + I+KV+
Sbjct: 272 EFAMDLEHHNYRSYQGFVCLMQISTR-GEDFIIDTLA--LRSHIHMLNNVTTNPAIVKVL 328
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKIS 158
HG+ D L +F I + N++DT A L+ + L LLK++
Sbjct: 329 HGSDSDIKWLQRDFGIYIVNMFDTGQASRVLEYP------------SASLAFLLKYFCAV 376
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALK---QNRL 215
N K + + W+ R + +M+ YA D LL ++ R+ E K N L
Sbjct: 377 DANKKYQLAD--------WRIRKIPEEMIKYAREDTHYLLYIYDRLRNELINKGKGSNNL 428
Query: 216 LLDNL 220
LL+ L
Sbjct: 429 LLEVL 433
>gi|357628572|gb|EHJ77859.1| hypothetical protein KGM_09083 [Danaus plexippus]
Length = 56
Score = 42.7 bits (99), Expect = 0.94, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEV 339
FH + A E+ + TKM Q +K+FY D+KQ++ +FIK++EV
Sbjct: 14 FHPPGQQAQEQELA---TKMLQIQSKRFYLDVKQNRRGRFIKVAEV 56
>gi|47228827|emb|CAG07559.1| unnamed protein product [Tetraodon nigroviridis]
Length = 550
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 20/117 (17%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+E I+KV HGA D L +F + + ++DT A AL L+ H
Sbjct: 319 LNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLAR----------H 368
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
+ L+ LL + N+ + R W+ RPL +M+ YA AD LL ++
Sbjct: 369 S--LDHLLTHF--------CNVASDKRYQLADWRIRPLPEEMVQYARADTHYLLYIY 415
>gi|380087227|emb|CCC14403.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 273
Score = 42.4 bits (98), Expect = 0.97, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 16 MNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSL-ALQNGKIFIFDV- 73
M LI+ + + Q +++I S LDLEG L +G ++L+++ L + + DV
Sbjct: 1 MATPTLISSLPDLQVFLSSIPPSSTFYLDLEGKSLSRNGTLTLLTVHVLPSKAASVIDVQ 60
Query: 74 ------YSCPLIMFDGK-LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAF 126
++ P DGK L +LE + K DA L ++ +RL V D Q
Sbjct: 61 ILGDSAFTTPGT--DGKTLKAILEDPQTSKCFWDVRNDADALWAHHKVRLAGVTDIQLLE 118
Query: 127 TALQLSDPRLLSQDLVPHTIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSD 185
A ++ D L + ++ + +LK+ K K+ ++ L N ++ RPL +
Sbjct: 119 NASRVGDKTYLHG--LDKSVQSDLVLKWTEKERWIRTKREVRALMTNN-DVFACRPLDTK 175
Query: 186 MLLYAAADVESLLALFH----RMTKEYALK 211
+ Y DV L AL + R +KE+ K
Sbjct: 176 TMQYCVNDVLCLPALHNIYAKRTSKEWLAK 205
>gi|167533742|ref|XP_001748550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773069|gb|EDQ86714.1| predicted protein [Monosiga brevicollis MX1]
Length = 471
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 116 LKNVYDTQCAF---TALQLSDPRLLSQDL-VPHTIGLNDLLKFYKISPNNFKKNIQNLYR 171
L+ V+DTQ A+ L + +P++ + L + +TIGL DL+ + P Q L
Sbjct: 169 LERVFDTQLAYLINATLFIRNPQVAANLLGIRNTIGLADLVT--HMFPEVKMDKGQALSD 226
Query: 172 ENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
W+ RPL + LLYA +DVE L+ + HR+
Sbjct: 227 -----WRVRPLNDEQLLYAISDVEHLIEMRHRL 254
>gi|326502996|dbj|BAJ99123.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L E+ + KV+HGA D L +F + + N++DT A LQ+ L + L+ H
Sbjct: 98 LKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNLFDTGQASRVLQMERNSL--EHLLHH 155
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH-- 202
G ++ N +N W++RPL+ +M+ YA D LL ++
Sbjct: 156 FCG---------VTANKIYQNAD---------WRSRPLSDEMIKYAREDTHYLLYIYDLM 197
Query: 203 --RMTKEYALKQNRLLLD 218
R+ +E + +N LLL+
Sbjct: 198 RLRLQRE-STSENDLLLE 214
>gi|297826687|ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
gi|297327065|gb|EFH57485.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 32 MATILNESKV-GLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGK--LHE 87
+A IL + KV +D E L G +L+ ++ K F+ D +++ D L
Sbjct: 130 LAEILAKEKVFAVDTEQHSLRSFLGFTALIQISTHE-KDFLVDT----IVLHDAMSILRP 184
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
V I KV HGA D L +F+I + N++DT A LS P+ L+ G
Sbjct: 185 VFSEPNICKVFHGADNDVLWLQRDFHIYVVNMFDTAKACEV--LSKPQRSLAYLLETVCG 242
Query: 148 L--NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
+ N LL+ RE+ W+ RPL+ +M+ YA D LL + +T
Sbjct: 243 VATNKLLQ-----------------RED---WRQRPLSEEMVRYARTDAHYLLYIADSLT 282
Query: 206 KEYALKQ 212
E LKQ
Sbjct: 283 AE--LKQ 287
>gi|195327281|ref|XP_002030350.1| GM25386 [Drosophila sechellia]
gi|194119293|gb|EDW41336.1| GM25386 [Drosophila sechellia]
Length = 267
Score = 42.4 bits (98), Expect = 1.0, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 12 LRTLMNRTNLITDVQEA-QSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFI 70
L ++R LI V A+ I ++ + L +E G S++ +A NG +I
Sbjct: 33 LEKQLDRIVLIYQVDTTYHRALKDIKDQKIISLLVEPSFYGRHQPTSILVVATGNGT-YI 91
Query: 71 FDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
FD+ + LI + L ++LE+D+ KVIH + A LL I L ++DT F AL
Sbjct: 92 FDIKALGLIFLE--LAKILEADQPRKVIHYSHRIADHLLHRHRISLGGIFDT---FVALC 146
Query: 131 LSDPRLLSQDLVPHTI 146
L+S+ +P+T+
Sbjct: 147 -----LISETRIPYTL 157
>gi|357475071|ref|XP_003607821.1| Transcription factor Pur-alpha [Medicago truncatula]
gi|355508876|gb|AES90018.1| Transcription factor Pur-alpha [Medicago truncatula]
Length = 164
Score = 42.4 bits (98), Expect = 1.0, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 312 KMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTAHQN 371
K Q +K FYFD+K++ +++KISE TR+ I + S + D N + +
Sbjct: 31 KTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPFSGISWFLDLFNYYVNS--- 86
Query: 372 TPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFV 408
+ + S+ L DT+ ++ D+ +N R RF+
Sbjct: 87 -------EDQELFSKELQLDTKVFYFDIGENRRGRFL 116
>gi|393910372|gb|EFO27811.2| 3'-5' exonuclease [Loa loa]
Length = 844
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 71/191 (37%), Gaps = 48/191 (25%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS--DPRLLSQDLV 142
L+E ILKV HGA D L +F I + N++DT A L S + L Q
Sbjct: 327 LNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDTYKAMRVLNYSKFSYQHLVQTCC 386
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
HT+ KF K W+ RPLT YA +D LL +
Sbjct: 387 NHTLD----KKFQKAD------------------WRLRPLTGAHKTYARSDTHYLLHCYD 424
Query: 203 RMT-------------KEYALKQN---------RLLLDNLIYETLFNHVVPLNIRKRRQF 240
++ EY ++ + + ++ YE L PLN R+QF
Sbjct: 425 QLRIKLLDQGDAAGNLLEYVYNESAQTCLTVYKKPVFESDGYEKLLVGRKPLN--SRQQF 482
Query: 241 RQNQLRRWRKD 251
L +WR +
Sbjct: 483 ALAALWKWRDE 493
>gi|312066427|ref|XP_003136265.1| 3'-5' exonuclease [Loa loa]
Length = 845
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 71/191 (37%), Gaps = 48/191 (25%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLS--DPRLLSQDLV 142
L+E ILKV HGA D L +F I + N++DT A L S + L Q
Sbjct: 327 LNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDTYKAMRVLNYSKFSYQHLVQTCC 386
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
HT+ KF K W+ RPLT YA +D LL +
Sbjct: 387 NHTLD----KKFQKAD------------------WRLRPLTGAHKTYARSDTHYLLHCYD 424
Query: 203 RMT-------------KEYALKQN---------RLLLDNLIYETLFNHVVPLNIRKRRQF 240
++ EY ++ + + ++ YE L PLN R+QF
Sbjct: 425 QLRIKLLDQGDAAGNLLEYVYNESAQTCLTVYKKPVFESDGYEKLLVGRKPLN--SRQQF 482
Query: 241 RQNQLRRWRKD 251
L +WR +
Sbjct: 483 ALAALWKWRDE 493
>gi|195143871|ref|XP_002012920.1| GL23665 [Drosophila persimilis]
gi|194101863|gb|EDW23906.1| GL23665 [Drosophila persimilis]
Length = 903
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ V++ A+ + + +D+E G LV ++ + K +IFD +
Sbjct: 279 LVDSVEKLNQALEELRRAPHIAIDVEHHSYRTFMGITCLVQMSTRT-KDYIFDSLALREE 337
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M L+ VL + +K++HGA D L + ++ + N++DT A AL ++ RL
Sbjct: 338 MH--VLNLVLTDPKKVKILHGADQDIEWLQRDLSLYVVNMFDTHRAAKALNMA--RLSLA 393
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
L+ H + L D+ K +++ W+ RPL ++ YA D L+
Sbjct: 394 FLLKHYVDL-DVDKSLQLA-----------------DWRMRPLPQQLIDYARQDTHYLIY 435
Query: 200 LFHRMT 205
++ RMT
Sbjct: 436 VYERMT 441
>gi|224144831|ref|XP_002325430.1| predicted protein [Populus trichocarpa]
gi|222862305|gb|EEE99811.1| predicted protein [Populus trichocarpa]
Length = 855
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L EV + KV+HGA D L +F I + N++DT A L+L L + L+ H
Sbjct: 297 LREVFKDPAKRKVMHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSL--EYLLHH 354
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
G+ KK QN W+ RPL +M+ YA D LL ++ M
Sbjct: 355 FCGV------------TAKKEYQNAE------WRLRPLPDEMIRYAREDTHYLLHIYDLM 396
>gi|118361377|ref|XP_001013917.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89295684|gb|EAR93672.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1490
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 32/200 (16%)
Query: 21 LITDVQEA----QSAMATILNESKVGLDLE---GMDLGVDGKVSLVSLALQNGKIFIFDV 73
I D +E Q TILN VG D E + G VS++ LA+QN KI+IFD
Sbjct: 375 FIYDTKEQKQIFQEVEKTILNSKIVGFDSEFASQWNKFEKGGVSIIQLAVQN-KIYIFDA 433
Query: 74 YSCPLIMFDGKLHE----VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTAL 129
+ + F + + ES +I+K H D ++ + ++ F
Sbjct: 434 LNLLVNKFSQEFFNFCKTLFESKQIIKAGHSISTDLN--------EMEKTFKSEKKFDLN 485
Query: 130 QLSDPRLLSQDL--VPHTIGLNDLL-KFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDM 186
D LL++D+ + +T L ++ K + + F++ I N W RPL
Sbjct: 486 NFVDIALLNRDIFSLANTASLKFMVQKLLNLQMSKFEQ-ISN--------WDRRPLRKSQ 536
Query: 187 LLYAAADVESLLALFHRMTK 206
+ YAA D ++ L+ ++ +
Sbjct: 537 IHYAAVDAFIVIKLYEKLVQ 556
>gi|347827584|emb|CCD43281.1| hypothetical protein [Botryotinia fuckeliana]
Length = 823
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV HGA+ D L + + + ++DT A L + L
Sbjct: 288 LNEVFADPNIIKVFHGAYMDIVWLQRDLGLYVVGLFDTHYACRRLGFAGGSLAF------ 341
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK Y + K + + W+ RPL +M YA AD LL +F +
Sbjct: 342 ------LLKKYIDFDADKKYQLAD--------WRIRPLPEEMFFYARADTHFLLYIFDNL 387
Query: 205 TKE 207
E
Sbjct: 388 RNE 390
>gi|255569470|ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 857
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L EV + KV+HGA D L +F I + N++DT A L+L L + L+ H
Sbjct: 294 LREVFKDPTKRKVMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLERNSL--EHLLRH 351
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
G I+ N K QN W+ RPLT +ML Y D LL ++ M
Sbjct: 352 FCG---------ITAN---KEYQNA------DWRLRPLTDEMLRYGREDTHYLLYIYDLM 393
>gi|326496869|dbj|BAJ98461.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L E+ + KV+HGA D L +F + + N++DT A LQ+ L + L+ H
Sbjct: 30 LKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNLFDTGQASRVLQMERNSL--EHLLHH 87
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH-- 202
G ++ N +N W++RPL+ +M+ YA D LL ++
Sbjct: 88 FCG---------VTANKIYQNAD---------WRSRPLSDEMIKYAREDTHYLLYIYDLM 129
Query: 203 --RMTKEYALKQNRLLLD 218
R+ +E + +N LLL+
Sbjct: 130 RLRLQRE-STSENDLLLE 146
>gi|342880534|gb|EGU81622.1| hypothetical protein FOXB_07858 [Fusarium oxysporum Fo5176]
Length = 860
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 23/180 (12%)
Query: 40 KVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
++ +DLE D G VSL+ ++ + K +I D P L++V ++KV
Sbjct: 267 EIAIDLEHHDFRSYVGLVSLMQISTRE-KDWIVDTLQ-PWRHKLEVLNQVFTDPNVVKVF 324
Query: 99 HGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKIS 158
HGA+ D L + + + ++DT F QL P L+ + D K Y+++
Sbjct: 325 HGAYMDMVWLQRDLGLYVNGLFDT--FFACEQLHYPAKSLAYLLSKFVDF-DADKQYQLA 381
Query: 159 PNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLD 218
W+ RPL +M+ YA +D LL ++ R+ E +R +D
Sbjct: 382 -----------------DWRIRPLPEEMMYYARSDTHYLLYIYDRVRNELVAASDRGDVD 424
>gi|402075969|gb|EJT71392.1| hypothetical protein GGTG_10651 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 277
Score = 42.4 bits (98), Expect = 1.2, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 12/193 (6%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGK-IFIFDVYSCPLI 79
+++ + Q +++I S + LD+EG DLG G +++++ + K + DV
Sbjct: 10 IVSSAKRLQIFLSSITPRSTLYLDIEGKDLGRRGTLNIITALIHPRKQASLIDVQKLGKA 69
Query: 80 MFD------GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
F L +LE + K DA L ++ +RL V D Q A +
Sbjct: 70 AFTTANGAGATLKSILEDQSVPKYFWDVRTDAVALWAHHQVRLAGVMDVQLLEKAARRRG 129
Query: 134 PRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQN---LYRENPHIWKTRPLTSDMLLYA 190
+ D + + + L + ++ +N Q+ L+R I+ RPL + Y
Sbjct: 130 GS--NTDFIGLRNAVKNDLDLPRALLGSWLQNKQHAAALFRARQDIFSLRPLRKKVKRYC 187
Query: 191 AADVESLLALFHR 203
DVE L AL R
Sbjct: 188 VDDVEHLPALAER 200
>gi|356515280|ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
Length = 873
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 28/140 (20%)
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
F G L + + I KV HGA D L +F+I + N++DT A LS P+
Sbjct: 179 FMGILRPIFANPSICKVFHGADNDIVWLQRDFHIYVVNLFDTSKACEV--LSKPQK---- 232
Query: 141 LVPHTIGLNDLLKFY-KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
L LL+ Y ++ N L RE+ W+ RPL+++M+ YA D LL
Sbjct: 233 ------SLAYLLETYCGVTTNKL------LQRED---WRQRPLSAEMVHYARTDAHYLLY 277
Query: 200 LFHRMTKEYALKQNRLLLDN 219
+ + + E LKQ LDN
Sbjct: 278 IANCLINE--LKQ----LDN 291
>gi|401887667|gb|EJT51646.1| hypothetical protein A1Q1_07058 [Trichosporon asahii var. asahii
CBS 2479]
Length = 906
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 24 DVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMF 81
D E +A+ L ++K + +DLE + G L+ ++ + G +I D + +
Sbjct: 320 DTPEQLAALTETLKKAKEIAVDLEHHNQRSYYGFTCLMQISTREGD-WIIDTLALRAELR 378
Query: 82 DGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
+ KL V ++KV HGA D L +F+I + N++DT A L+ P+
Sbjct: 379 EHKLGHVFADPSVVKVFHGADSDIVWLQEDFDIYIVNLFDTYHATKVLEF--PKF----- 431
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y +F+ + + + W+ RP+ +M+ YA +D LL ++
Sbjct: 432 -----SLASLLQLY----CDFEPDKRYQMAD----WRIRPIPDEMMKYARSDTHFLLFIY 478
>gi|448519311|ref|XP_003868060.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis
Co 90-125]
gi|380352399|emb|CCG22625.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis]
Length = 814
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 37/198 (18%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+++ +I+KV+HGAF D L + + + +++DT A L S
Sbjct: 336 LNKIFTDPKIIKVLHGAFMDIIWLQRDLGLYIVSLFDTYHASRQLGFS------------ 383
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
L LL + + K + + W+ RPL ML YA +D LL +F ++
Sbjct: 384 KFSLQYLLDTFAHFRTSKKYQLAD--------WRIRPLPKPMLAYARSDTHFLLYIFDQL 435
Query: 205 TKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYPYIEE 264
+N+L+ + + LF+ + KRR F + R +L SK P +
Sbjct: 436 -------RNKLIDSDKLARVLFDS---RQVAKRR-FEYTKFRPLSSNL-GSKVSCP-VMA 482
Query: 265 VNSNEYIWRN---DYNVP 279
N NE W + YNVP
Sbjct: 483 ANPNE-PWGSLMYQYNVP 499
>gi|154301232|ref|XP_001551029.1| hypothetical protein BC1G_10286 [Botryotinia fuckeliana B05.10]
Length = 823
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L+EV I+KV HGA+ D L + + + ++DT A L + L
Sbjct: 288 LNEVFADPNIIKVFHGAYMDIVWLQRDLGLYVVGLFDTHYACRRLGFAGGSLAF------ 341
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
LLK Y + K + + W+ RPL +M YA AD LL +F +
Sbjct: 342 ------LLKKYIDFDADKKYQLAD--------WRIRPLPEEMFFYARADTHFLLYIFDNL 387
Query: 205 TKE 207
E
Sbjct: 388 RNE 390
>gi|406699611|gb|EKD02812.1| hypothetical protein A1Q2_02887 [Trichosporon asahii var. asahii
CBS 8904]
Length = 906
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 24 DVQEAQSAMATILNESK-VGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMF 81
D E +A+ L ++K + +DLE + G L+ ++ + G +I D + +
Sbjct: 320 DTPEQLAALTETLKKAKEIAVDLEHHNQRSYYGFTCLMQISTREGD-WIIDTLALRAELR 378
Query: 82 DGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL 141
+ KL V ++KV HGA D L +F+I + N++DT A L+ P+
Sbjct: 379 EHKLGHVFADPSVVKVFHGADSDIVWLQEDFDIYIVNLFDTYHATKVLEF--PKF----- 431
Query: 142 VPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALF 201
L LL+ Y +F+ + + + W+ RP+ +M+ YA +D LL ++
Sbjct: 432 -----SLASLLQLY----CDFEPDKRYQMAD----WRIRPIPDEMMKYARSDTHFLLFIY 478
>gi|125773943|ref|XP_001358230.1| GA20243 [Drosophila pseudoobscura pseudoobscura]
gi|54637966|gb|EAL27368.1| GA20243 [Drosophila pseudoobscura pseudoobscura]
Length = 905
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGVD-GKVSLVSLALQNGKIFIFDVYSCPLI 79
L+ V++ A+ + + +D+E G LV ++ + K +IFD +
Sbjct: 279 LVDSVEKLNQALEELRRAPHIAIDVEHHSYRTFMGITCLVQMSTRT-KDYIFDSLALREE 337
Query: 80 MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQ 139
M L+ VL + +K++HGA D L + ++ + N++DT A AL ++ RL
Sbjct: 338 MH--VLNLVLTDPKKVKILHGADQDIEWLQRDLSLYVVNMFDTHRAAKALNMA--RLSLA 393
Query: 140 DLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLA 199
L+ H + L D+ K +++ W+ RPL ++ YA D L+
Sbjct: 394 FLLKHYVDL-DVDKSLQLA-----------------DWRMRPLPQQLIDYARQDTHYLIY 435
Query: 200 LFHRMT 205
++ RMT
Sbjct: 436 VYERMT 441
>gi|392579689|gb|EIW72816.1| hypothetical protein TREMEDRAFT_70822 [Tremella mesenterica DSM
1558]
Length = 955
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 84 KLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVP 143
KL V+ I+KV HG+ D L +F+I + ++DT A L
Sbjct: 356 KLGGVMVDPSIVKVFHGSQSDIPWLQQDFSIFVVGLFDTFHATLVLNFPA---------- 405
Query: 144 HTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
H+ L LLK Y NF + + + W+ RPL +M +YA AD LL ++ +
Sbjct: 406 HS--LASLLKLY----CNFDADKRYQLAD----WRIRPLPEEMEMYARADTHFLLYIYDK 455
Query: 204 M 204
+
Sbjct: 456 L 456
>gi|296472380|tpg|DAA14495.1| TPA: Werner syndrome [Bos taurus]
Length = 707
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 41 VGLDLEGMDL--GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
VG D+E G +V+L+ L + K ++F + S + F L +LE++ I K
Sbjct: 77 VGFDIEWPPFKKGTLSRVALIQLCVAESKCYLFHISS--MSGFPQGLKMLLENEAIKKAG 134
Query: 99 HGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
G D LL +F+I LK++ + T A L+ + T LN L+K+
Sbjct: 135 VGIEQDQWKLLRDFDINLKSIVELTDVANEKLKCIE-----------TWSLNGLVKYL-- 181
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
F K + W PLT D +YAA D + ++ ++
Sbjct: 182 ----FGKQLLKDRSIRCSDWSRFPLTEDQKVYAATDAYAGFIIYQKLA 225
>gi|361126577|gb|EHK98571.1| putative Exonuclease 3'-5' domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 269
Score = 42.0 bits (97), Expect = 1.3, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 43 LDLEGMDLGVDGKVSLVSLALQNGK-IFIFDVYSCPLIMFDG-----KLHEVLESDRILK 96
+DLEG+ LG G +S++SL + K ++ D+++ + F L +LES I K
Sbjct: 38 IDLEGVALGRHGTLSILSLYVAPTKETYLIDIHTLGAVAFTTTNNGISLKSILESGTIPK 97
Query: 97 VIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
V D+ L S F I ++ V D Q A + + +S + IG DL +
Sbjct: 98 VFFDIRNDSDALFSLFQISVRGVVDLQLMELASRKGSRKFVSG--LAKCIG-RDL----Q 150
Query: 157 ISPNN-------FKKNIQNLYRENP---HIWKTRPLTSDMLLYAAADVESLLALFH 202
ISP ++ +Q E ++ RPL +++ Y DV L L++
Sbjct: 151 ISPAQQTQWRVTKERGVQLFAPETGGRYEVFNERPLKPEIIRYCQQDVALLPILYN 206
>gi|330927778|ref|XP_003301996.1| hypothetical protein PTT_13665 [Pyrenophora teres f. teres 0-1]
gi|311322891|gb|EFQ89918.1| hypothetical protein PTT_13665 [Pyrenophora teres f. teres 0-1]
Length = 314
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 43 LDLEGMDLGVDGKVS----LVSLALQNGKIFIFDVYSCPLIMFDGK------LHEVLESD 92
+DLEG++L +G +S LV + + +F+ DVY+ F+ L ++LE +
Sbjct: 40 VDLEGVNLCREGSISIFTLLVDIDIITRGVFLIDVYTLGAQAFNTPGAKKTTLKDMLEDE 99
Query: 93 RILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ--------LSDPRLLSQDLVPH 144
+I KV D+ L ++F + L+ + D Q +A + L+ ++ +P
Sbjct: 100 KIPKVFFDVRNDSDALFTHFGVALQGIEDVQLMESATRKTTASRKYLNGLAKCVENKLPT 159
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL---F 201
G L +K++ ++ + + + ++ RP+ D++ Y DV L L F
Sbjct: 160 RHGGGGLAA-WKLAKEKGERLFKAEHGGSYEVFNQRPIPDDIISYCVGDVRHLPELRDTF 218
Query: 202 HR 203
+R
Sbjct: 219 YR 220
>gi|296472378|tpg|DAA14493.1| TPA: Werner syndrome [Bos taurus]
Length = 744
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 41 VGLDLEGMDL--GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVI 98
VG D+E G +V+L+ L + K ++F + S + F L +LE++ I K
Sbjct: 77 VGFDIEWPPFKKGTLSRVALIQLCVAESKCYLFHISS--MSGFPQGLKMLLENEAIKKAG 134
Query: 99 HGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKI 157
G D LL +F+I LK++ + T A L+ + T LN L+K+
Sbjct: 135 VGIEQDQWKLLRDFDINLKSIVELTDVANEKLKCIE-----------TWSLNGLVKYL-- 181
Query: 158 SPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
F K + W PLT D +YAA D + ++ ++
Sbjct: 182 ----FGKQLLKDRSIRCSDWSRFPLTEDQKVYAATDAYAGFIIYQKLA 225
>gi|256822615|ref|YP_003146578.1| ribonuclease D [Kangiella koreensis DSM 16069]
gi|256796154|gb|ACV26810.1| ribonuclease D [Kangiella koreensis DSM 16069]
Length = 384
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 58 LVSLALQNGK-IFIFDVYSCPLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIR 115
L + + +GK I++ D PL D L E+ S ++K +H D L +
Sbjct: 53 LALIQIYDGKEIYLID----PLAFDDLSALTELFASTSVVKALHSCSEDLEALYHQYGFE 108
Query: 116 LKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPH 175
V+DTQ A + IGL+ + N ++ ++ + H
Sbjct: 109 FNQVFDTQIAASL---------------DGIGLS-------VGYGNIVEHFLSVVLDKEH 146
Query: 176 I---WKTRPLTSDMLLYAAADVESLLALFHRM 204
W RPL+ + +YAA DV+ L+ +++R+
Sbjct: 147 TKTDWLQRPLSQEQRVYAAQDVQYLMPVYYRL 178
>gi|365985620|ref|XP_003669642.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
gi|343768411|emb|CCD24399.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
Length = 790
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 47/272 (17%)
Query: 13 RTLMNRTNLITDVQEAQSAMATILNE-SKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFI 70
+ M T + D E+ +M LN ++ +DLE D G V L+ ++ + + +I
Sbjct: 227 QPWMETTAIWVDTPESLQSMIKDLNNCTEFAVDLEHHDYRTYYGIVCLMQISTRT-QDYI 285
Query: 71 FDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
D + L L+E + +I KV+HGAF D L + + + +++DT A AL
Sbjct: 286 VD--TLKLRSHLQPLNEPFTNPQITKVLHGAFMDIIWLQRDLGLYIVSLFDTFHASRALG 343
Query: 131 LSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYA 190
P L KF +NFK + + + W+ RPL+ M YA
Sbjct: 344 F-----------PKNSLAYLLEKF-----SNFKTSKKYQMAD----WRIRPLSKAMNSYA 383
Query: 191 AADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRK 250
+D LL +F +M +N+L+ D + L N+ KRR F + R
Sbjct: 384 RSDTHFLLNIFDQM-------RNKLVQDGKLAGVLKES---RNVAKRR-FEYVKYRP--- 429
Query: 251 DLMSSKRPYPYIEEVNSNEYIWRN---DYNVP 279
L++S Y IE+++ W+ YN+P
Sbjct: 430 -LITSSAVYSPIEKIDP----WKTLMYQYNIP 456
>gi|443898900|dbj|GAC76233.1| exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100
[Pseudozyma antarctica T-34]
Length = 917
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 25/181 (13%)
Query: 31 AMATILNESKV---GLDLEGMDLGV-DGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLH 86
A+ L+E +V +DLE G V L+ L+ + G +I D S + L+
Sbjct: 351 ALRDHLDEPRVTEIAIDLEHHSYRTYQGIVCLMQLSTRWGD-WIIDTLSDEVRQHAELLN 409
Query: 87 EVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTI 146
+KV+HGA D L + + L N++DT A L L P +
Sbjct: 410 SAFTHPDKVKVLHGANHDVLWLQRDLGLYLVNLFDTYHATNVL-----------LFP-SH 457
Query: 147 GLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMTK 206
GLN L+ Y NF + + + W+ RPL +ML YA +D +LL ++ +
Sbjct: 458 GLNYLMARY----CNFDADKRYQLAD----WRIRPLPKEMLYYARSDTHTLLYIYDNLRH 509
Query: 207 E 207
E
Sbjct: 510 E 510
>gi|340056462|emb|CCC50794.1| predicted zinc finger protein [Trypanosoma vivax Y486]
Length = 391
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 29 QSAMATILNESKVGLDLEGMDLGVD----GKVSLVSLALQNGK--IFIFDVYSCPLIMFD 82
+ A+ +++ + LD+E G++SL+ A + K +F+FD+ + +F
Sbjct: 66 EDAVGSLVKAHSIALDVEAFCTTEHAKQLGRISLIQ-ACSDAKPVVFLFDILALTPEVFV 124
Query: 83 GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLV 142
+L + + K++ D L ++L+ V D Q FTA+Q +L S V
Sbjct: 125 KTTQPLLGNSGVRKILFDCRRDVEALSCQLGVKLEGVLDLQLFFTAIQW---KLRS---V 178
Query: 143 PHTIGLNDLLKFYKISPNNFKKNIQNLYRE-------------NPHIWKTRPLTSDMLLY 189
G+ +L KN+ L R+ N +W RPL L Y
Sbjct: 179 NRRSGMGYVL-----------KNVAGLTRQEADSAVQAAMTLGNRPVWDVRPLPDHFLEY 227
Query: 190 AAADVESLLAL 200
AA DV +L L
Sbjct: 228 AAGDVRHILLL 238
>gi|357120688|ref|XP_003562057.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 690
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F I + N++DT A LQ+ L + L+ H G
Sbjct: 227 KVMHGADRDIIWLQRDFRIYVCNLFDTGQASRVLQMERNSL--EHLLHHFCG-------- 276
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH----RMTKEYALK 211
++ N +N W++RPL+ +M+ YA D LL ++ R+ KE +
Sbjct: 277 -VTANKVYQNAD---------WRSRPLSDEMIKYAREDTHYLLYIYDLMRLRLQKE-STC 325
Query: 212 QNRLLLD 218
+N LLL+
Sbjct: 326 ENDLLLE 332
>gi|71745756|ref|XP_827508.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831673|gb|EAN77178.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 390
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 22 ITDVQEA-QSAMATILNESKVGLDLEGMDLGVD-----GKVSLVSLALQNGK--IFIFDV 73
+ D E + A+ ++ + LD+E D G++SLV A + K +F+FDV
Sbjct: 57 VVDTHEKLKEAVTSLQGARSIALDIEAF-CTTDQAKQLGRISLVQ-ACSDAKPVVFLFDV 114
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
+ +F + +L I K+ D L ++ + V D Q FTA+Q
Sbjct: 115 LTLTPDVFVKDMQSLLSDREIRKLFFDCRRDVEALSCQLGVKPEGVLDLQVFFTAIQW-- 172
Query: 134 PRLLSQDLVPHTIGLNDLLK-FYKISPNNFKKNIQN-LYRENPHIWKTRPLTSDMLLYAA 191
+L S V G+ +LK ++ +Q + N +W RPL L YAA
Sbjct: 173 -KLRS---VNRRSGMGYVLKSVAGLTRQEGDSAVQTAMTLGNRPVWDIRPLPDHFLEYAA 228
Query: 192 ADVESLLAL 200
DV +L L
Sbjct: 229 GDVRHILLL 237
>gi|381393851|ref|ZP_09919569.1| ribonuclease D [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330123|dbj|GAB54702.1| ribonuclease D [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 403
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 66 GKIFIFDVYSC----PLIMFD-GKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVY 120
G I +FD + P+ + D + +L + I+KV H D L + +I ++
Sbjct: 49 GLIQVFDKHQVALIDPVAIKDLSEFSSILTNPNIVKVAHACSEDLEALWHHLHIIPTPLF 108
Query: 121 DTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTR 180
DTQ A L L ++G +L++ N F+ + E+ W R
Sbjct: 109 DTQFAAAMLGLGV-----------SVGYANLVE------NLFEITVDK--GESRTDWIQR 149
Query: 181 PLTSDMLLYAAADVESLLALFHRMTKE 207
PL+S YA+ADV L+AL+ + KE
Sbjct: 150 PLSSAQCAYASADVTHLMALYEHIYKE 176
>gi|67848464|gb|AAY82265.1| hypothetical protein At2g32420 [Arabidopsis thaliana]
Length = 327
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 26/130 (20%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L V I KV HGA D L +F+I + N++DT A LS P+ L+
Sbjct: 183 LRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEV--LSKPQRSLAYLLET 240
Query: 145 TIGL--NDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFH 202
G+ N LL+ RE+ W+ RPL+ +M+ YA D LL +
Sbjct: 241 VCGVATNKLLQ-----------------RED---WRQRPLSEEMVRYARXDAHYLLYIAD 280
Query: 203 RMTKEYALKQ 212
+T E LKQ
Sbjct: 281 SLTTE--LKQ 288
>gi|261331708|emb|CBH14702.1| zinc finger protein, predicted [Trypanosoma brucei gambiense
DAL972]
Length = 390
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 22 ITDVQEA-QSAMATILNESKVGLDLEGMDLGVD-----GKVSLVSLALQNGK--IFIFDV 73
+ D E + A+ ++ + LD+E D G++SLV A + K +F+FDV
Sbjct: 57 VVDTHEKLKEAVTSLQGARSIALDIEAF-CTTDQAKQLGRISLVQ-ACSDAKPVVFLFDV 114
Query: 74 YSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSD 133
+ +F + +L I K+ D L ++ + V D Q FTA+Q
Sbjct: 115 LTLTPDVFVKDMQSLLSDREIRKLFFDCRRDVEALSCQLGVKPEGVLDLQVFFTAIQW-- 172
Query: 134 PRLLSQDLVPHTIGLNDLLK-FYKISPNNFKKNIQN-LYRENPHIWKTRPLTSDMLLYAA 191
+L S V G+ +LK ++ +Q + N +W RPL L YAA
Sbjct: 173 -KLRS---VNRRSGMGYVLKSVAGLTRQEGDSAVQTAMTLGNRPVWDIRPLPDHFLEYAA 228
Query: 192 ADVESLLAL 200
DV +L L
Sbjct: 229 GDVRHILLL 237
>gi|414886886|tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 960
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 25/155 (16%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFN 113
G +L+ ++ QN + ++ D + +M G L V + I K+ HGA D L +F+
Sbjct: 174 GYTALMQISTQN-EDYLIDTIALHDVM--GILRPVFANSSICKIFHGADNDILWLQRDFH 230
Query: 114 IRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY-KISPNNFKKNIQNLYRE 172
I + N++DT A L L P L LL+ Y +++ + + + RE
Sbjct: 231 IYVVNMFDTAKACEIL-----------LKPQK-SLAYLLEVYCEVTTD------KTMQRE 272
Query: 173 NPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ W+ RPLT +M+ YA D LL + + + E
Sbjct: 273 D---WRLRPLTPEMIEYARTDAHYLLYIANCLASE 304
>gi|414886885|tpg|DAA62899.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 951
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 25/155 (16%)
Query: 54 GKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFN 113
G +L+ ++ QN + ++ D + +M G L V + I K+ HGA D L +F+
Sbjct: 174 GYTALMQISTQN-EDYLIDTIALHDVM--GILRPVFANSSICKIFHGADNDILWLQRDFH 230
Query: 114 IRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY-KISPNNFKKNIQNLYRE 172
I + N++DT A L L P L LL+ Y +++ + + + RE
Sbjct: 231 IYVVNMFDTAKACEIL-----------LKPQK-SLAYLLEVYCEVTTD------KTMQRE 272
Query: 173 NPHIWKTRPLTSDMLLYAAADVESLLALFHRMTKE 207
+ W+ RPLT +M+ YA D LL + + + E
Sbjct: 273 D---WRLRPLTPEMIEYARTDAHYLLYIANCLASE 304
>gi|410951934|ref|XP_003982645.1| PREDICTED: transcriptional activator protein Pur-beta [Felis catus]
Length = 201
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 400 KDNGRARFVTISQLLPVGGKL---------SSIAFPAQDLGPIIGLISDLQQEHSCPEDE 450
++N R RF+ I Q + GG +IA PAQ L ++ L ++ +DE
Sbjct: 34 QENQRGRFLRIRQTVNRGGGGPGPGGLQSGQTIALPAQGLIEFRDALAKLIDDYGGDDDE 93
Query: 451 -----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 94 LAGGAGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 147
>gi|407408126|gb|EKF31676.1| hypothetical protein MOQ_004473 [Trypanosoma cruzi marinkellei]
Length = 387
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 31 AMATILNESKVGLDLEGMDLGVD----GKVSLVSLALQNGK--IFIFDVYSCPLIMFDGK 84
A+ ++L + LD+E G++SL+ A + K +F+FDV + F
Sbjct: 64 AVGSLLKARSIALDIEAFCTTEQAKQLGRISLLQ-ACSDAKPVVFLFDVLTLTAPTFVKS 122
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
+ +L + I K++ D L S ++ + V D Q FTA+Q +L S V
Sbjct: 123 VEPLLRNRGIRKLLFDCRRDVEALSSQLGLKPEGVLDLQVFFTAIQW---KLRS---VNR 176
Query: 145 TIGLNDLLK-FYKISPNNFKKNIQ-NLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
G+ +LK ++ + +Q + N +W RPL L YAA DV +L L
Sbjct: 177 RSGMTYVLKSVAGLTRQDGDSAVQAAMTLGNRPVWDIRPLPDHFLEYAADDVRHILLL 234
>gi|389749312|gb|EIM90489.1| hypothetical protein STEHIDRAFT_50846 [Stereum hirsutum FP-91666
SS1]
Length = 197
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 21 LITDVQEAQSAMATILNESKVGLDLEGMDLGV-DGKVSLVSL-------------ALQNG 66
L D SA+A + + + D EG+ LG G +SL+++ +NG
Sbjct: 8 LCDDRASFNSAVAALSSSRTLYFDCEGVKLGTAGGTLSLITIRSAPSPSNSRQSDGDRNG 67
Query: 67 KIFIFDVYSCPLI---MFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQ 123
+ FIFD+ S L + L +L S ++LKV+ D+ L F + L+NV D Q
Sbjct: 68 QTFIFDITSLTLARQPVSLKPLFALLTSPKVLKVVWDGRMDSSALHHYFRVNLRNVLDLQ 127
>gi|358058978|dbj|GAA95376.1| hypothetical protein E5Q_02030 [Mixia osmundae IAM 14324]
Length = 768
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 33/193 (17%)
Query: 37 NESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
+ +++ +DLE D G V L+ ++ ++ +I D + L+EV +
Sbjct: 239 DHAEIAIDLEHHDFRSYVGFVCLMQISTRSHD-WIVDTLVSEVRDRLESLNEVFADPAKV 297
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KV+HGA D L +F + + N++DT A L R L+ L +T + D K Y
Sbjct: 298 KVMHGAQSDVIWLQRDFGLYIVNLFDTYHATVVLSYGQ-RSLASLLTKYTHFVPD--KRY 354
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM----------- 204
+++ W+ RPL +M+ YA +D LL ++ +
Sbjct: 355 QLA-----------------DWRLRPLPQEMIDYARSDTHYLLNIYDHLRRALIATKLDP 397
Query: 205 TKEYALKQNRLLL 217
T E+AL + LL
Sbjct: 398 TPEHALDGSETLL 410
>gi|356514082|ref|XP_003525736.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 506
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 20/123 (16%)
Query: 85 LHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPH 144
L EV + KV+HGA D L +F I + N++DT A L+L L + L+ H
Sbjct: 145 LREVFKDPSKRKVMHGADNDVVWLQRDFGIYICNLFDTHQASKVLKLERKSL--EYLLCH 202
Query: 145 TIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
F I+ N ++ W+ RPL +ML YA D LL ++ M
Sbjct: 203 ---------FCDITANKEYQSAD---------WRLRPLPYEMLRYAREDTHYLLYIYDFM 244
Query: 205 TKE 207
E
Sbjct: 245 RIE 247
>gi|402912969|ref|XP_003919007.1| PREDICTED: transcriptional activator protein Pur-beta-like, partial
[Papio anubis]
Length = 177
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 31/119 (26%)
Query: 400 KDNGRARFVTISQLLPVGGKL-------------SSIAFPAQDLGPIIGLISDLQQEHSC 446
K+N R RF+ I Q + GG +IA PAQ L ++ L ++
Sbjct: 1 KENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQGLIEFRDALAKLIDDYGG 60
Query: 447 PEDE-----------------DGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
+DE PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 61 EDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,934,211,471
Number of Sequences: 23463169
Number of extensions: 434241158
Number of successful extensions: 1262502
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 2453
Number of HSP's that attempted gapping in prelim test: 1252338
Number of HSP's gapped (non-prelim): 8060
length of query: 843
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 692
effective length of database: 8,816,256,848
effective search space: 6100849738816
effective search space used: 6100849738816
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)