Your job contains 1 sequence.
>psy5651
MEAKCQPQNNLLRTLMNRTNLITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVS
LALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVY
DTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTR
PLTSDMLLYAAADVESLLALFHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQF
RQNQLRRWRKDLMSSKRPYPYIEEVNSNEYIWRNDYNVPLANAKLLNNPINRMFHKEKES
ANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRD
HLNALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKL
SSIAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMR
ISEISTPSKVLTNIGIKSNIKTDTNIRTNNINVKMKTNIIIKMKRRINIITTMKRSNIIK
MKRRTNIITKMKMSNIKMKINTIKMKMKTNNITKAKMKTSIKMKINIITKMKMEIIAKMK
MNNTKMKISVTTKMESVKMVNIFTRMEMKTNIIARVKRMTNVKMKINIIIKIMMAKTSIK
MTTNIIIKMKISMIMKAKIHINKVKVNITKMIMTKIITKVKMKTSIKMKINTFKVKMKIS
IITKMNITNIKMKINVITKMNMETNNITIKMIRMTDIKMKINTITKIKVANIIIKVTKKT
NNIITKMKMTNVVPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCDKAS
DEC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5651
(843 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0022361 - symbol:Pur-alpha "Purine-rich binding pr... 341 3.6e-36 2
ZFIN|ZDB-GENE-040624-8 - symbol:pura "purine-rich element... 279 4.9e-29 2
UNIPROTKB|E1BMW9 - symbol:PURA "Uncharacterized protein" ... 276 4.4e-28 2
UNIPROTKB|Q00577 - symbol:PURA "Transcriptional activator... 276 4.4e-28 2
UNIPROTKB|I3LCN6 - symbol:PURA "Uncharacterized protein" ... 276 4.4e-28 2
MGI|MGI:103079 - symbol:Pura "purine rich element binding... 276 4.4e-28 2
FB|FBgn0000562 - symbol:egl "egalitarian" species:7227 "D... 344 7.7e-28 1
UNIPROTKB|Q9MYX6 - symbol:Q9MYX6 "DNA binding protein pur... 265 7.0e-27 2
ZFIN|ZDB-GENE-040426-1478 - symbol:purbb "purine-rich ele... 176 9.6e-20 3
UNIPROTKB|Q96QR8 - symbol:PURB "Transcriptional activator... 177 1.9e-18 3
UNIPROTKB|G3N0W8 - symbol:PURB "Uncharacterized protein" ... 174 3.3e-18 3
RGD|1559465 - symbol:Purb "purine rich element binding pr... 173 6.8e-18 3
MGI|MGI:1338779 - symbol:Purb "purine rich element bindin... 173 9.3e-18 3
GENEDB_PFALCIPARUM|PFB0215c - symbol:PFB0215c "3'-5' exon... 241 1.6e-17 2
UNIPROTKB|O96144 - symbol:PFB0215c "3'-5' exonuclease, pu... 241 1.6e-17 2
DICTYBASE|DDB_G0282387 - symbol:DDB_G0282387 "3'-5' exonu... 239 2.3e-17 1
TAIR|locus:2043555 - symbol:AT2G25910 species:3702 "Arabi... 209 3.4e-14 1
WB|WBGene00004046 - symbol:plp-1 species:6239 "Caenorhabd... 192 3.9e-14 1
MGI|MGI:1922279 - symbol:Purg "purine-rich element bindin... 113 6.9e-14 3
UNIPROTKB|Q9UJV8 - symbol:PURG "Purine-rich element-bindi... 107 2.5e-13 3
UNIPROTKB|E2RJB4 - symbol:EXD1 "Uncharacterized protein" ... 202 9.7e-13 2
UNIPROTKB|E1BDE2 - symbol:EXD1 "Uncharacterized protein" ... 198 2.7e-12 1
MGI|MGI:3045306 - symbol:Exd1 "exonuclease 3'-5' domain c... 195 5.6e-12 1
RGD|1561009 - symbol:Exd1 "exonuclease 3'-5' domain conta... 194 7.1e-12 1
UNIPROTKB|F1SSV1 - symbol:LOC100621282 "Uncharacterized p... 193 9.3e-12 1
UNIPROTKB|H9L298 - symbol:H9L298 "Uncharacterized protein... 161 4.8e-11 2
UNIPROTKB|Q8NHP7 - symbol:EXD1 "Exonuclease 3'-5' domain-... 178 1.6e-09 2
GENEDB_PFALCIPARUM|MAL8P1.35 - symbol:MAL8P1.35 "exonucle... 170 1.6e-09 1
UNIPROTKB|Q8IB75 - symbol:MAL8P1.35 "Exonuclease, putativ... 170 1.6e-09 1
UNIPROTKB|B7Z839 - symbol:EXD1 "cDNA FLJ55584" species:96... 178 2.3e-09 2
UNIPROTKB|I3LGH8 - symbol:I3LGH8 "Uncharacterized protein... 144 1.1e-08 1
WB|WBGene00015680 - symbol:egal-1 species:6239 "Caenorhab... 164 1.4e-08 1
UNIPROTKB|Q17902 - symbol:egal-1 "Protein EGAL-1, isoform... 164 1.4e-08 1
TAIR|locus:2045497 - symbol:PUR ALPHA-1 "AT2G32080" speci... 116 6.9e-08 2
ZFIN|ZDB-GENE-060825-267 - symbol:zgc:154068 "zgc:154068"... 135 1.0e-05 1
UNIPROTKB|Q14191 - symbol:WRN "Werner syndrome ATP-depend... 139 2.4e-05 1
UNIPROTKB|Q95Z10 - symbol:RRP6 "Rrp6p homologue" species:... 109 0.00024 2
UNIPROTKB|F1RX70 - symbol:WRN "Uncharacterized protein" s... 124 0.00096 1
>FB|FBgn0022361 [details] [associations]
symbol:Pur-alpha "Purine-rich binding protein-alpha"
species:7227 "Drosophila melanogaster" [GO:0003697 "single-stranded
DNA binding" evidence=NAS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0031935 "regulation of
chromatin silencing" evidence=IMP] Pfam:PF04845 GO:GO:0005634
GO:GO:0043565 EMBL:AE014135 OMA:REKRACE InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
GO:GO:0031935 FlyBase:FBgn0022361 UniGene:Dm.5734 GeneID:43797
KEGG:dme:Dmel_CG1507 CTD:43797 GenomeRNAi:43797 NextBio:835896
RefSeq:NP_524624.1 PDB:3K44 PDBsum:3K44 ProteinModelPortal:Q9V4D9
SMR:Q9V4D9 STRING:Q9V4D9 EnsemblMetazoa:FBtr0089995
EnsemblMetazoa:FBtr0310639 UCSC:CG1507-RB InParanoid:Q9V4D9
PhylomeDB:Q9V4D9 EvolutionaryTrace:Q9V4D9 ArrayExpress:Q9V4D9
Bgee:Q9V4D9 Uniprot:Q9V4D9
Length = 275
Score = 341 (125.1 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 69/180 (38%), Positives = 110/180 (61%)
Query: 311 TKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLT--A 368
TKM Q +K+FY D+KQ++ +FIK++E+ D R+QI++++S RDHL++ A
Sbjct: 46 TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYA 105
Query: 369 HQNTPR-HRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPA 427
P + +KSE++IKD RRY+LDLK+N R RF+ +SQ + GG S IA PA
Sbjct: 106 SLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPA 165
Query: 428 QDLGPIIGLISDLQQEHSCPED---EDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEI 484
Q + ++DL +E + + PE +M+ +NK F+F++ +N +G +MRISE+
Sbjct: 166 QGMIEFRDALTDLLEEFGANDGGRFKGDLPEERHMKVDNKNFYFDIGQNNRGVYMRISEV 225
Score = 103 (41.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 24/111 (21%), Positives = 56/111 (50%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAFPAQDLGPIIGLISDLQQ 442
+ +++L ++R++LD+K N R RF+ ++++ G+ S I +S
Sbjct: 44 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEI-GADGRRSQIYLALSTAAEFRDHLSSFSD 102
Query: 443 EHSC--PEDEDGAPEGNYMRC-----NNKRFFFNVSKNGKGTFMRISEIST 486
++ P + D PE ++ + +R++ ++ +N +G F+R+S+ T
Sbjct: 103 YYASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTIT 153
Score = 79 (32.9 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCD-LYKSAECSTS 830
V ++R SITIPE+ W RF + F+ C+ + KS++ T+
Sbjct: 225 VKNNFRTSITIPEKCWIRFRDIFNDYCEKMKKSSDSITA 263
>ZFIN|ZDB-GENE-040624-8 [details] [associations]
symbol:pura "purine-rich element binding protein A"
species:7955 "Danio rerio" [GO:0003690 "double-stranded DNA
binding" evidence=IDA] Pfam:PF04845 ZFIN:ZDB-GENE-040624-8
GO:GO:0003690 CTD:5813 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OMA:REKRACE OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
EMBL:CT573432 EMBL:BC081472 EMBL:BC151877 EMBL:AY450553
IPI:IPI00506479 RefSeq:NP_001001846.1 UniGene:Dr.145037
UniGene:Dr.151288 UniGene:Dr.161632 UniGene:Dr.85924
Ensembl:ENSDART00000097307 Ensembl:ENSDART00000138017 GeneID:415106
KEGG:dre:415106 InParanoid:Q6JIZ2 NextBio:20818791 Uniprot:Q6JIZ2
Length = 287
Score = 279 (103.3 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 64/195 (32%), Positives = 104/195 (53%)
Query: 300 SANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLR 359
S + + + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV R
Sbjct: 33 SGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFR 92
Query: 360 DHLNALLTAH-----QNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
D+L + + N + +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 93 DYLGDFIEHYAQLGPSNPDMPQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTV 152
Query: 415 PVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFN 469
G L S IA PAQ L ++ L ++ ++ PEG + +NKRFFF+
Sbjct: 153 NRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEDEPAELPEGTSLTVDNKRFFFD 212
Query: 470 VSKNGKGTFMRISEI 484
V N G FMR+SE+
Sbjct: 213 VGSNKYGVFMRVSEV 227
Score = 76 (31.8 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCD 837
V P+YR SIT+P + W +F TF + D K + R + C+
Sbjct: 227 VKPTYRNSITVPYKVWSKFGSTFCKYADEMKKIQ-EKQREKRACE 270
>UNIPROTKB|E1BMW9 [details] [associations]
symbol:PURA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032422
"purine-rich negative regulatory element binding" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006268 "DNA unwinding
involved in replication" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA] [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=IEA] Pfam:PF04845 GO:GO:0005737 GO:GO:0045892
GO:GO:0007399 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0003700 GO:GO:0003697 GO:GO:0000900 GO:GO:0006268
GO:GO:0005662 GO:GO:0032422 GO:GO:0003691 CTD:5813 OMA:REKRACE
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712
GeneTree:ENSGT00390000015406 EMBL:DAAA02020426 IPI:IPI00823901
RefSeq:NP_001192363.1 UniGene:Bt.91641 PRIDE:E1BMW9
Ensembl:ENSBTAT00000011694 GeneID:782746 KEGG:bta:782746
NextBio:20925662 Uniprot:E1BMW9
Length = 322
Score = 276 (102.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 67/195 (34%), Positives = 105/195 (53%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
+ + + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 55 QHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYL 114
Query: 363 N------ALLTAHQNTPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
A L Q + +D +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 115 GDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTV 174
Query: 415 PVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFN 469
G L S IA PAQ L ++ L ++ E+ PEG + +NKRFFF+
Sbjct: 175 NRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFD 234
Query: 470 VSKNGKGTFMRISEI 484
V N G FMR+SE+
Sbjct: 235 VGSNKYGVFMRVSEV 249
Score = 70 (29.7 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCDK 838
V P+YR SIT+P + W +F TF + + K + + C++
Sbjct: 249 VKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQ 294
>UNIPROTKB|Q00577 [details] [associations]
symbol:PURA "Transcriptional activator protein Pur-alpha"
species:9606 "Homo sapiens" [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032422 "purine-rich negative regulatory element binding"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0006268
"DNA unwinding involved in replication" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IC] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005662 "DNA
replication factor A complex" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006270 "DNA replication initiation"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF04845 GO:GO:0005737 GO:GO:0045892 GO:GO:0007399
GO:GO:0008284 GO:GO:0043025 GO:GO:0030425 GO:GO:0003705
GO:GO:0006270 GO:GO:0003697 GO:GO:0008134 GO:GO:0000784
GO:GO:0000900 GO:GO:0006268 GO:GO:0005662 GO:GO:0032422
GO:GO:0003691 EMBL:M96684 EMBL:U02098 IPI:IPI00023591 PIR:A45036
RefSeq:NP_005850.1 UniGene:Hs.443121 UniGene:Hs.733524
ProteinModelPortal:Q00577 SMR:Q00577 IntAct:Q00577 STRING:Q00577
PhosphoSite:Q00577 DMDM:1346918 PaxDb:Q00577 PeptideAtlas:Q00577
PRIDE:Q00577 Ensembl:ENST00000331327 GeneID:5813 KEGG:hsa:5813
UCSC:uc003lfa.3 CTD:5813 GeneCards:GC05P139473 HGNC:HGNC:9701
MIM:600473 neXtProt:NX_Q00577 PharmGKB:PA34045 eggNOG:NOG312871
HOGENOM:HOG000232132 HOVERGEN:HBG006888 InParanoid:Q00577
OMA:REKRACE OrthoDB:EOG4PRSRB PhylomeDB:Q00577 GenomeRNAi:5813
NextBio:22642 Bgee:Q00577 CleanEx:HS_PURA Genevestigator:Q00577
GermOnline:ENSG00000185129 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 Uniprot:Q00577
Length = 322
Score = 276 (102.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 67/195 (34%), Positives = 105/195 (53%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
+ + + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 55 QHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYL 114
Query: 363 N------ALLTAHQNTPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
A L Q + +D +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 115 GDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTV 174
Query: 415 PVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFN 469
G L S IA PAQ L ++ L ++ E+ PEG + +NKRFFF+
Sbjct: 175 NRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFD 234
Query: 470 VSKNGKGTFMRISEI 484
V N G FMR+SE+
Sbjct: 235 VGSNKYGVFMRVSEV 249
Score = 70 (29.7 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCDK 838
V P+YR SIT+P + W +F TF + + K + + C++
Sbjct: 249 VKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQ 294
>UNIPROTKB|I3LCN6 [details] [associations]
symbol:PURA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032422
"purine-rich negative regulatory element binding" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006268 "DNA unwinding
involved in replication" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA] [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=IEA] Pfam:PF04845 GO:GO:0005737 GO:GO:0045892
GO:GO:0007399 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0003700 GO:GO:0003697 GO:GO:0000900 GO:GO:0006268
GO:GO:0005662 GO:GO:0032422 GO:GO:0003691 CTD:5813 OMA:REKRACE
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712
GeneTree:ENSGT00390000015406 EMBL:FP565385 RefSeq:XP_003354344.1
RefSeq:XP_003354345.1 ProteinModelPortal:I3LCN6 SMR:I3LCN6
PRIDE:I3LCN6 Ensembl:ENSSSCT00000023612 GeneID:100625926
KEGG:ssc:100625926 Uniprot:I3LCN6
Length = 322
Score = 276 (102.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 67/195 (34%), Positives = 105/195 (53%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
+ + + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 55 QHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYL 114
Query: 363 N------ALLTAHQNTPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
A L Q + +D +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 115 GDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTV 174
Query: 415 PVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFN 469
G L S IA PAQ L ++ L ++ E+ PEG + +NKRFFF+
Sbjct: 175 NRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFD 234
Query: 470 VSKNGKGTFMRISEI 484
V N G FMR+SE+
Sbjct: 235 VGSNKYGVFMRVSEV 249
Score = 70 (29.7 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCDK 838
V P+YR SIT+P + W +F TF + + K + + C++
Sbjct: 249 VKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQ 294
>MGI|MGI:103079 [details] [associations]
symbol:Pura "purine rich element binding protein A"
species:10090 "Mus musculus" [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005662 "DNA replication factor A complex" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=NAS] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=NAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IDA] [GO:0030154 "cell differentiation" evidence=NAS]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032422 "purine-rich
negative regulatory element binding" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0046332 "SMAD
binding" evidence=IDA] MGI:MGI:103079 Pfam:PF04845 GO:GO:0005737
GO:GO:0006915 GO:GO:0045892 GO:GO:0007399 GO:GO:0030154
GO:GO:0008284 GO:GO:0008283 GO:GO:0043025 GO:GO:0030425
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0003697
GO:GO:0046332 GO:GO:0000900 GO:GO:0031575 GO:GO:0006268
GO:GO:0005662 GO:GO:0032422 GO:GO:0003691 EMBL:U02098 CTD:5813
eggNOG:NOG312871 HOGENOM:HOG000232132 HOVERGEN:HBG006888
OMA:REKRACE OrthoDB:EOG4PRSRB InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 EMBL:AF017631 IPI:IPI00118447 RefSeq:NP_033015.1
UniGene:Mm.231802 UniGene:Mm.482241 ProteinModelPortal:P42669
SMR:P42669 IntAct:P42669 STRING:P42669 PhosphoSite:P42669
UCD-2DPAGE:P42669 PaxDb:P42669 PRIDE:P42669 DNASU:19290
Ensembl:ENSMUST00000051301 GeneID:19290 KEGG:mmu:19290
UCSC:uc008enh.2 GeneTree:ENSGT00390000015406 InParanoid:P42669
NextBio:296222 Bgee:P42669 CleanEx:MM_PURA Genevestigator:P42669
GermOnline:ENSMUSG00000043991 Uniprot:P42669
Length = 321
Score = 276 (102.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 67/195 (34%), Positives = 105/195 (53%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
+ + + +K NK+FY D+KQ+ +F+KI+EV ++++ +SMSV RD+L
Sbjct: 54 QHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYL 113
Query: 363 N------ALLTAHQNTPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
A L Q + +D +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 114 GDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTV 173
Query: 415 PVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFN 469
G L S IA PAQ L ++ L ++ E+ PEG + +NKRFFF+
Sbjct: 174 NRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFD 233
Query: 470 VSKNGKGTFMRISEI 484
V N G FMR+SE+
Sbjct: 234 VGSNKYGVFMRVSEV 248
Score = 70 (29.7 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCDK 838
V P+YR SIT+P + W +F TF + + K + + C++
Sbjct: 248 VKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQ 293
>FB|FBgn0000562 [details] [associations]
symbol:egl "egalitarian" species:7227 "Drosophila
melanogaster" [GO:0048477 "oogenesis" evidence=IDA;NAS;IMP;TAS]
[GO:0007312 "oocyte nucleus migration involved in oocyte
dorsal/ventral axis specification" evidence=TAS] [GO:0007294
"germarium-derived oocyte fate determination" evidence=IMP;NAS;TAS]
[GO:0007310 "oocyte dorsal/ventral axis specification"
evidence=TAS] [GO:0016325 "oocyte microtubule cytoskeleton
organization" evidence=TAS] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IMP;IDA]
[GO:0003729 "mRNA binding" evidence=IDA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0007294
GO:GO:0003729 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008298
GO:GO:0008408 GO:GO:0051028 GO:GO:0007312 GO:GO:0016325
UCSC:CG4051-RB FlyBase:FBgn0000562 EMBL:BT009999
ProteinModelPortal:Q7YU43 STRING:Q7YU43 PRIDE:Q7YU43
InParanoid:Q7YU43 ArrayExpress:Q7YU43 Bgee:Q7YU43 Uniprot:Q7YU43
Length = 1004
Score = 344 (126.2 bits), Expect = 7.7e-28, P = 7.7e-28
Identities = 78/209 (37%), Positives = 115/209 (55%)
Query: 37 NES-KVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
NES V LD EG++LG+ G+++L+ + G+ F+FDV SCP ++ DG L VLE D+++
Sbjct: 553 NESIVVSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVI 612
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KVIH DA L F I L+NV+DTQ A LQ + Q I LN L + Y
Sbjct: 613 KVIHDCRNDAANLYLQFGILLRNVFDTQAAHAILQYQESG--KQVYKAKYISLNSLCEQY 670
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL--ALFHRMTKEYALKQN 213
N K ++ +YR + W RPLT +M+LYAA DV L+ LF + ++ +N
Sbjct: 671 NAPCNPIKDQLKQIYRRDQKFWAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIK-PEN 729
Query: 214 RLLLDNLIYETLFNHVVPLNIRKRRQFRQ 242
R L L E + + P ++ R++ R+
Sbjct: 730 RALFSELCTEQILMQIKPNEVKIRKKQRK 758
>UNIPROTKB|Q9MYX6 [details] [associations]
symbol:Q9MYX6 "DNA binding protein pur-alpha" species:9940
"Ovis aries" [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005662 "DNA replication factor A complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007399
"nervous system development" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046332 "SMAD binding" evidence=ISS] Pfam:PF04845 GO:GO:0005737
GO:GO:0045892 GO:GO:0007399 GO:GO:0008284 GO:GO:0003700
GO:GO:0003697 GO:GO:0046332 GO:GO:0008134 GO:GO:0005662
GO:GO:0003691 CTD:5813 HOVERGEN:HBG006888 InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 EMBL:AF282406 RefSeq:NP_001009447.1
UniGene:Oar.1098 GeneID:443494 Uniprot:Q9MYX6
Length = 321
Score = 265 (98.3 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 67/195 (34%), Positives = 103/195 (52%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
+ + + +K NK+FY D+KQ+ +F+KI+EV + + +SMSV RD+L
Sbjct: 55 QHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKT-LTLSMSVAVEFRDYL 113
Query: 363 N------ALLTAHQNTPRHRYRDT--HTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLL 414
A L Q + +D +KSE L+++ R+Y++DLK+N R RF+ I Q +
Sbjct: 114 GDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTV 173
Query: 415 PVGGKLSS-----IAFPAQDLGPIIGLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFN 469
G L S IA PAQ L ++ L ++ E+ PEG + +NKRFFF+
Sbjct: 174 NRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFD 233
Query: 470 VSKNGKGTFMRISEI 484
V N G FMR+SE+
Sbjct: 234 VGSNKYGVFMRVSEV 248
Score = 70 (29.7 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCDK 838
V P+YR SIT+P + W +F TF + + K + + C++
Sbjct: 248 VKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQ 293
>ZFIN|ZDB-GENE-040426-1478 [details] [associations]
symbol:purbb "purine-rich element binding protein
Bb" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
Pfam:PF04845 ZFIN:ZDB-GENE-040426-1478 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
EMBL:BC056517 EMBL:BC067670 IPI:IPI00498661 RefSeq:NP_956841.1
UniGene:Dr.83952 PRIDE:Q6PHK6 Ensembl:ENSDART00000081308
GeneID:393519 KEGG:dre:393519 CTD:393519 OMA:KENVRGR
NextBio:20814545 Bgee:Q6PHK6 Uniprot:Q6PHK6
Length = 297
Score = 176 (67.0 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 40/127 (31%), Positives = 71/127 (55%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +FIKI+EV +++++ +SMSV RD+L
Sbjct: 23 EQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYL 82
Query: 363 NALLTAHQ----NTPRHRYRDT--------HTIKSEVLIKDTRRYFLDLKDNGRARFVTI 410
+ + ++P + + +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 83 GDFIEHYAQLGPSSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 142
Query: 411 SQLLPVG 417
Q + G
Sbjct: 143 RQTVNRG 149
Score = 106 (42.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 376 RYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD- 429
R ++T + S+ L +R++LD+K N + RF+ I+++ G K LS S+A +D
Sbjct: 22 REQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDY 81
Query: 430 LGPIIGLISDLQQEHSCPED-------EDGAP----EGNYMRCNNKRFFFNVSKNGKGTF 478
LG I + L S PE +DG P + ++ N++++ ++ +N +G F
Sbjct: 82 LGDFIEHYAQLGP--SSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGRF 139
Query: 479 MRISE 483
+RI +
Sbjct: 140 LRIRQ 144
Score = 94 (38.1 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 415 PVGGKLS--SIAFPAQDLGPIIGLISDLQQEHSCPEDED-----GA-------PEGNYMR 460
P GG + +IA PAQ L ++ L ++ EDE+ GA PEG +
Sbjct: 160 PGGGVQAGQTIALPAQGLIEFRDALAKLIDDYG-GEDEELSGGPGAAGGYGELPEGTSIM 218
Query: 461 CNNKRFFFNVSKNGKGTFMRISEISTPS 488
++KRFFF+V N G F+R+SE+ PS
Sbjct: 219 VDSKRFFFDVGSNKYGVFLRVSEVK-PS 245
Score = 68 (29.0 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAE 826
V PSYR SITIP ++W +F F + + K +
Sbjct: 242 VKPSYRNSITIPFKAWGKFGGAFSRYAEEMKEIQ 275
>UNIPROTKB|Q96QR8 [details] [associations]
symbol:PURB "Transcriptional activator protein Pur-beta"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003690 "double-stranded DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0045637 "regulation of
myeloid cell differentiation" evidence=NAS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005662 "DNA replication factor A
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] Pfam:PF04845
GO:GO:0045892 GO:GO:0003729 GO:GO:0003700 GO:GO:0006351
GO:GO:0003690 GO:GO:0003697 EMBL:CH236960 EMBL:CH471128
GO:GO:0008134 GO:GO:0000900 GO:GO:0005662 GO:GO:0032422
EMBL:AC004854 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 OMA:KENVRGR EMBL:AY039216
EMBL:BC101735 EMBL:BC101737 IPI:IPI00045051 PIR:B45036
RefSeq:NP_150093.1 UniGene:Hs.349150 ProteinModelPortal:Q96QR8
SMR:Q96QR8 IntAct:Q96QR8 STRING:Q96QR8 PhosphoSite:Q96QR8
DMDM:74732688 PaxDb:Q96QR8 PeptideAtlas:Q96QR8 PRIDE:Q96QR8
Ensembl:ENST00000395699 GeneID:5814 KEGG:hsa:5814 UCSC:uc003tme.3
CTD:5814 GeneCards:GC07M044882 H-InvDB:HIX0034001 HGNC:HGNC:9702
HPA:HPA048766 MIM:608887 neXtProt:NX_Q96QR8 PharmGKB:PA34046
InParanoid:Q96QR8 PhylomeDB:Q96QR8 ChiTaRS:PURB GenomeRNAi:5814
NextBio:22646 Bgee:Q96QR8 CleanEx:HS_PURB Genevestigator:Q96QR8
GermOnline:ENSG00000146676 GO:GO:0045637 Uniprot:Q96QR8
Length = 312
Score = 177 (67.4 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 19 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 78
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDN 402
V RD L + + ++P +KSE L+++ R+Y+LDLK+N
Sbjct: 79 VAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKEN 138
Query: 403 GRARFVTISQLLPVGG 418
R RF+ I Q + GG
Sbjct: 139 QRGRFLRIRQTVNRGG 154
Score = 105 (42.0 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLL----------PVGGKLSS---IAFPAQD 429
+KSE L+++ R+Y+LDLK+N R RF+ I Q + P G L S IA PAQ
Sbjct: 119 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQG 178
Query: 430 LGPIIGLISDLQQEHSCPEDE-DGAPEG 456
L ++ L ++ +DE G P G
Sbjct: 179 LIEFRDALAKLIDDYGGEDDELAGGPGG 206
Score = 99 (39.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/120 (25%), Positives = 64/120 (53%)
Query: 378 RDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK--LS-SIAFPAQ---DLG 431
++T + S+ L +R++LD+K N + RF+ I+++ G K L+ S+A A+ LG
Sbjct: 29 QETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLG 88
Query: 432 PIIGLISDL----QQEHSCPEDEDGAP----EGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
I + L ++ + +E G P + ++ N++++ ++ +N +G F+RI +
Sbjct: 89 DFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQ 148
Score = 85 (35.0 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 454 PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 220 PEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 253
Score = 66 (28.3 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAE 826
V PSYR +IT+P ++W +F F + D K +
Sbjct: 250 VKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQ 283
>UNIPROTKB|G3N0W8 [details] [associations]
symbol:PURB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005662 "DNA replication factor A complex" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] Pfam:PF04845 GO:GO:0045892 GO:GO:0003729
GO:GO:0003700 GO:GO:0003690 GO:GO:0003697 GO:GO:0005662
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712
GeneTree:ENSGT00390000015406 OMA:KENVRGR CTD:5814 EMBL:DAAA02011179
RefSeq:NP_001193561.1 UniGene:Bt.28754 Ensembl:ENSBTAT00000063608
GeneID:504276 KEGG:bta:504276 NextBio:20866591 Uniprot:G3N0W8
Length = 304
Score = 174 (66.3 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 294 FHKEKESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMS 353
F E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+
Sbjct: 18 FQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMA 77
Query: 354 VVGHLRDHLNALLTAHQ----NTPRHRYRDT---------HTIKSEVLIKDTRRYFLDLK 400
V RD+L + + ++P +KSE L+++ R+Y+LDLK
Sbjct: 78 VAAEFRDYLGDFIEHYAQLGPSSPEQVAAAAGAEEGGGPRRALKSEFLVRENRKYYLDLK 137
Query: 401 DNGRARFVTISQLLPVGG 418
+N R RF+ I Q + GG
Sbjct: 138 ENQRGRFLRIRQTVNRGG 155
Score = 113 (44.8 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLL------PVGGKLSS---IAFPAQDLGPI 433
+KSE L+++ R+Y+LDLK+N R RF+ I Q + P G L S IA PAQ L
Sbjct: 120 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGPGPGGLQSGQTIALPAQGLIEF 179
Query: 434 IGLISDLQQEHSCPEDE-DGAPEG 456
++ L ++ +DE G P G
Sbjct: 180 RDALAKLIDDYGGEDDELAGGPGG 203
Score = 97 (39.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 378 RDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK----LS-SIAFPAQD-LG 431
++T + S+ L +R++LD+K N + RF+ I+++ G K LS ++A +D LG
Sbjct: 28 QETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDYLG 87
Query: 432 PII------GLISDLQQEHSCPEDEDGAP----EGNYMRCNNKRFFFNVSKNGKGTFMRI 481
I G S Q + +E G P + ++ N++++ ++ +N +G F+RI
Sbjct: 88 DFIEHYAQLGPSSPEQVAAAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRI 147
Query: 482 SE 483
+
Sbjct: 148 RQ 149
Score = 85 (35.0 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 454 PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 217 PEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 250
Score = 66 (28.3 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAE 826
V PSYR +IT+P ++W +F F + D K +
Sbjct: 247 VKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQ 280
>RGD|1559465 [details] [associations]
symbol:Purb "purine rich element binding protein B"
species:10116 "Rattus norvegicus" [GO:0000900 "translation
repressor activity, nucleic acid binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003729 "mRNA binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005662 "DNA
replication factor A complex" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISS] [GO:0032422
"purine-rich negative regulatory element binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046332 "SMAD binding" evidence=ISO]
RGD:1559465 Pfam:PF04845 GO:GO:0045892 GO:GO:0003729 GO:GO:0003700
GO:GO:0006351 GO:GO:0003690 GO:GO:0003697 GO:GO:0008134
GO:GO:0000900 GO:GO:0005662 GO:GO:0032422 eggNOG:NOG312871
HOGENOM:HOG000232132 HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712 CTD:5814
EMBL:AB182574 IPI:IPI00189358 RefSeq:NP_001017503.1
UniGene:Rn.156213 STRING:Q68A21 PhosphoSite:Q68A21 PRIDE:Q68A21
GeneID:498407 KEGG:rno:498407 UCSC:RGD:1559465 InParanoid:Q68A21
NextBio:699705 ArrayExpress:Q68A21 Genevestigator:Q68A21
GermOnline:ENSRNOG00000007042 Uniprot:Q68A21
Length = 315
Score = 173 (66.0 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 39/127 (30%), Positives = 69/127 (54%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD L
Sbjct: 31 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSL 90
Query: 363 NALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDNGRARFVTIS 411
+ + ++P +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 91 GDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIR 150
Query: 412 QLLPVGG 418
Q + GG
Sbjct: 151 QTVNRGG 157
Score = 105 (42.0 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLL----------PVGGKLSS---IAFPAQD 429
+KSE L+++ R+Y+LDLK+N R RF+ I Q + P G L S IA PAQ
Sbjct: 122 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGGGPGPGGLQSGQTIALPAQG 181
Query: 430 LGPIIGLISDLQQEHSCPEDE-DGAPEG 456
L ++ L ++ +DE G P G
Sbjct: 182 LIEFRDALAKLIDDYGGEDDELAGGPGG 209
Score = 99 (39.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 30/120 (25%), Positives = 64/120 (53%)
Query: 378 RDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK--LS-SIAFPAQ---DLG 431
++T + S+ L +R++LD+K N + RF+ I+++ G K L+ S+A A+ LG
Sbjct: 32 QETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLG 91
Query: 432 PIIGLISDL----QQEHSCPEDEDGAP----EGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
I + L ++ + +E G P + ++ N++++ ++ +N +G F+RI +
Sbjct: 92 DFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQ 151
Score = 85 (35.0 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 454 PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 223 PEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 256
Score = 66 (28.3 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAE 826
V PSYR +IT+P ++W +F F + D K +
Sbjct: 253 VKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQ 286
>MGI|MGI:1338779 [details] [associations]
symbol:Purb "purine rich element binding protein B"
species:10090 "Mus musculus" [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005662 "DNA
replication factor A complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=NAS] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0032422 "purine-rich negative regulatory element
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0046332 "SMAD
binding" evidence=IDA] MGI:MGI:1338779 Pfam:PF04845 GO:GO:0006915
GO:GO:0045892 GO:GO:0030154 GO:GO:0008283 GO:GO:0003729
GO:GO:0003700 GO:GO:0006351 GO:GO:0003697 GO:GO:0046332
GO:GO:0000900 GO:GO:0006268 GO:GO:0005662 GO:GO:0032422
EMBL:AL646020 GO:GO:0003691 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
OMA:KENVRGR CTD:5814 ChiTaRS:PURB EMBL:AF017630 IPI:IPI00128867
RefSeq:NP_035351.1 UniGene:Mm.390332 ProteinModelPortal:O35295
SMR:O35295 IntAct:O35295 STRING:O35295 PhosphoSite:O35295
PaxDb:O35295 PRIDE:O35295 DNASU:19291 Ensembl:ENSMUST00000179343
GeneID:19291 KEGG:mmu:19291 UCSC:uc007hys.1 InParanoid:O35295
NextBio:296226 Bgee:O35295 CleanEx:MM_PURB Genevestigator:O35295
GermOnline:ENSMUSG00000049647 Uniprot:O35295
Length = 324
Score = 173 (66.0 bits), Expect = 9.3e-18, Sum P(3) = 9.3e-18
Identities = 39/127 (30%), Positives = 69/127 (54%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD L
Sbjct: 40 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSL 99
Query: 363 NALLTAHQ----NTPRHRYRDTH-------TIKSEVLIKDTRRYFLDLKDNGRARFVTIS 411
+ + ++P +KSE L+++ R+Y+LDLK+N R RF+ I
Sbjct: 100 GDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIR 159
Query: 412 QLLPVGG 418
Q + GG
Sbjct: 160 QTVNRGG 166
Score = 108 (43.1 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 33/88 (37%), Positives = 46/88 (52%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLL----------PVGGKLSS---IAFPAQD 429
+KSE L+++ R+Y+LDLK+N R RF+ I Q + P G L S IA PAQ
Sbjct: 131 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGGGPGPGGLQSGQTIALPAQG 190
Query: 430 LGPIIGLISDLQQEHSCPEDE-DGAPEG 456
L ++ L ++ EDE G P G
Sbjct: 191 LIEFRDALAKLIDDYGGDEDELAGGPGG 218
Score = 99 (39.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 30/120 (25%), Positives = 64/120 (53%)
Query: 378 RDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGK--LS-SIAFPAQ---DLG 431
++T + S+ L +R++LD+K N + RF+ I+++ G K L+ S+A A+ LG
Sbjct: 41 QETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLG 100
Query: 432 PIIGLISDL----QQEHSCPEDEDGAP----EGNYMRCNNKRFFFNVSKNGKGTFMRISE 483
I + L ++ + +E G P + ++ N++++ ++ +N +G F+RI +
Sbjct: 101 DFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQ 160
Score = 85 (35.0 bits), Expect = 9.3e-18, Sum P(3) = 9.3e-18
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 454 PEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
PEG + ++KRFFF+V N G F+R+SE+ PS
Sbjct: 232 PEGTSITVDSKRFFFDVGCNKYGVFLRVSEVK-PS 265
Score = 66 (28.3 bits), Expect = 9.3e-18, Sum P(3) = 9.3e-18
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAE 826
V PSYR +IT+P ++W +F F + D K +
Sbjct: 262 VKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQ 295
>GENEDB_PFALCIPARUM|PFB0215c [details] [associations]
symbol:PFB0215c "3'-5' exonuclease, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0008408 EMBL:AE001362 InterPro:IPR022967 SMART:SM00316
PIR:C71620 RefSeq:XP_001349559.1 ProteinModelPortal:O96144
EnsemblProtists:PFB0215c:mRNA GeneID:812641 KEGG:pfa:PFB0215c
EuPathDB:PlasmoDB:PF3D7_0204800 HOGENOM:HOG000284244
ProtClustDB:CLSZ2432980 Uniprot:O96144
Length = 416
Score = 241 (89.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 77/312 (24%), Positives = 141/312 (45%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI-M 80
+ +++ + N +GLD+EG +G G VS++ + ++ I+IFD+Y C + +
Sbjct: 58 VDEIKNGNYNLLKDFNMKMIGLDIEGYKIGKYGIVSIIQICYED--IYIFDIYKCDNVYL 115
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
F + ++LE D I+KV H D L + +NI LKN+ DTQ A+ L ++ +
Sbjct: 116 FINYIKDILECDDIIKVTHDCREDCSILYNQYNIHLKNILDTQVAYNLLLKNNNNYTNT- 174
Query: 141 LVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
+ I +DLLK Y NN K + + +I+ RP+ +++ YA DV L L
Sbjct: 175 ---YQISYDDLLKKYLFINNNHKIYFHKMITLDNYIYLKRPIMKELISYAIQDVIYLKPL 231
Query: 201 FHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYP 260
+ ++ +KQ + E N V N ++ + +Q + + L S
Sbjct: 232 ILCILDKFIIKQKKK------EEQEKNKYV--NDKQNNKIKQEKFDKTSNTLQSKGN--- 280
Query: 261 YIEEVNSNEYIWRNDY--NVPLANAKLLNNP-INRMFHKEKESANEERIEVIDTKMYQCF 317
I N+ + + ++ L + K +N +N EKE ++ +++ + C
Sbjct: 281 -ISSFNNQDLYHTKEIIQDIILHSKKYVNYQFLNSHIKDEKEL---QKGMILEGMVVSCN 336
Query: 318 NKKFYFDIKQSK 329
N K Y + K
Sbjct: 337 NTKMYLKLNMRK 348
Score = 42 (19.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 455 EGNYMRCNNKRFFFNVSKNGKGTFM 479
EG + CNN + + ++ +G +
Sbjct: 329 EGMVVSCNNTKMYLKLNMRKRGVIL 353
>UNIPROTKB|O96144 [details] [associations]
symbol:PFB0215c "3'-5' exonuclease, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0008408 EMBL:AE001362
InterPro:IPR022967 SMART:SM00316 PIR:C71620 RefSeq:XP_001349559.1
ProteinModelPortal:O96144 EnsemblProtists:PFB0215c:mRNA
GeneID:812641 KEGG:pfa:PFB0215c EuPathDB:PlasmoDB:PF3D7_0204800
HOGENOM:HOG000284244 ProtClustDB:CLSZ2432980 Uniprot:O96144
Length = 416
Score = 241 (89.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 77/312 (24%), Positives = 141/312 (45%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLI-M 80
+ +++ + N +GLD+EG +G G VS++ + ++ I+IFD+Y C + +
Sbjct: 58 VDEIKNGNYNLLKDFNMKMIGLDIEGYKIGKYGIVSIIQICYED--IYIFDIYKCDNVYL 115
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQD 140
F + ++LE D I+KV H D L + +NI LKN+ DTQ A+ L ++ +
Sbjct: 116 FINYIKDILECDDIIKVTHDCREDCSILYNQYNIHLKNILDTQVAYNLLLKNNNNYTNT- 174
Query: 141 LVPHTIGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
+ I +DLLK Y NN K + + +I+ RP+ +++ YA DV L L
Sbjct: 175 ---YQISYDDLLKKYLFINNNHKIYFHKMITLDNYIYLKRPIMKELISYAIQDVIYLKPL 231
Query: 201 FHRMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKRRQFRQNQLRRWRKDLMSSKRPYP 260
+ ++ +KQ + E N V N ++ + +Q + + L S
Sbjct: 232 ILCILDKFIIKQKKK------EEQEKNKYV--NDKQNNKIKQEKFDKTSNTLQSKGN--- 280
Query: 261 YIEEVNSNEYIWRNDY--NVPLANAKLLNNP-INRMFHKEKESANEERIEVIDTKMYQCF 317
I N+ + + ++ L + K +N +N EKE ++ +++ + C
Sbjct: 281 -ISSFNNQDLYHTKEIIQDIILHSKKYVNYQFLNSHIKDEKEL---QKGMILEGMVVSCN 336
Query: 318 NKKFYFDIKQSK 329
N K Y + K
Sbjct: 337 NTKMYLKLNMRK 348
Score = 42 (19.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 455 EGNYMRCNNKRFFFNVSKNGKGTFM 479
EG + CNN + + ++ +G +
Sbjct: 329 EGMVVSCNNTKMYLKLNMRKRGVIL 353
>DICTYBASE|DDB_G0282387 [details] [associations]
symbol:DDB_G0282387 "3'-5' exonuclease
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0282387 EMBL:AAFI02000047 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 eggNOG:NOG263976
RefSeq:XP_640019.1 ProteinModelPortal:Q54SM0
EnsemblProtists:DDB0238342 GeneID:8623543 KEGG:ddi:DDB_G0282387
OMA:CRRDSEI Uniprot:Q54SM0
Length = 390
Score = 239 (89.2 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 62/204 (30%), Positives = 103/204 (50%)
Query: 31 AMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYS--CPLIMFDGKLHEV 88
A+ I E +GLD+E +++G G +SLV ++ NG+I++FD+ + F L EV
Sbjct: 177 AIHEIKKEKLIGLDIEAIEMGKKGDISLVQISTPNGRIYLFDIIKMGANVTPFKYGLKEV 236
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGL 148
LES +ILKV+H D+ L + + L +VYD Q A +Q + + ++ G
Sbjct: 237 LESVKILKVVHDCRRDSEILFHRYQVALAHVYDVQIAHALVQ----KKIQGNIPIRRYGF 292
Query: 149 NDLLKFY---KISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHR 203
N+L+ Y K S + K ++ + P +W RPL D + YA+ D LL +++
Sbjct: 293 NELIDLYTSRKYSEICIDIKFKVKQQFENQPEVWAKRPLPKDFIDYASLDAACLLPIYYH 352
Query: 204 MTKEYALKQNRLLLDNLIYETLFN 227
+ + L+ N D +T FN
Sbjct: 353 IKPK--LQSN---FDRRFLKTHFN 371
>TAIR|locus:2043555 [details] [associations]
symbol:AT2G25910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA;ISS]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002562 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012337 Pfam:PF00013 Pfam:PF01612 PROSITE:PS50084
SMART:SM00322 SMART:SM00474 EMBL:CP002685 GO:GO:0003723
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 IPI:IPI00656778
RefSeq:NP_001031418.1 UniGene:At.13054 ProteinModelPortal:F4ITJ6
SMR:F4ITJ6 PRIDE:F4ITJ6 EnsemblPlants:AT2G25910.2 GeneID:817132
KEGG:ath:AT2G25910 OMA:CIMQIAF PhylomeDB:F4ITJ6 Uniprot:F4ITJ6
Length = 342
Score = 209 (78.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 56/164 (34%), Positives = 85/164 (51%)
Query: 41 VGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKVIHG 100
+G D EG+DL GK+ ++ +A N I++ DV ++ LES+ I KVIH
Sbjct: 58 IGFDCEGVDLCRHGKLCIMQIAFSNA-IYLVDVIEGGEVIMKA-CKPALESNYITKVIHD 115
Query: 101 AFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYKISPN 160
D+ L F IRL NV DTQ A++ ++ + R D + L ++ IS
Sbjct: 116 CKRDSEALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYE 175
Query: 161 NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
K+ ++ L R++P W RP+T M+ AA DV LL L+H+M
Sbjct: 176 E-KEEVRVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKM 218
>WB|WBGene00004046 [details] [associations]
symbol:plp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=IDA] Pfam:PF04845 GO:GO:0005634 GO:GO:0009792
EMBL:FO080446 GO:GO:0043186 GO:GO:0003691 eggNOG:NOG312871
HOGENOM:HOG000232132 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 GeneTree:ENSGT00390000015406 OMA:KENVRGR PIR:T25756
RefSeq:NP_501241.1 ProteinModelPortal:Q94230 SMR:Q94230
IntAct:Q94230 STRING:Q94230 PaxDb:Q94230 EnsemblMetazoa:F45E4.2.1
EnsemblMetazoa:F45E4.2.2 GeneID:177540 KEGG:cel:CELE_F45E4.2
UCSC:F45E4.2.1 CTD:177540 WormBase:F45E4.2 InParanoid:Q94230
NextBio:897268 Uniprot:Q94230
Length = 226
Score = 192 (72.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 47/174 (27%), Positives = 95/174 (54%)
Query: 319 KKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNALLTA--HQNTPRHR 376
K++Y D+ ++ ++IKI+E+ + +++I +S+ + ++ +L +T H
Sbjct: 27 KRYYIDVNENTRGRYIKIAELGTNY-KSRIILSIVAAKAIVSEISKMLALIDEPSTGEHA 85
Query: 377 YRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLS--SIAFPAQDLGPII 434
+++ IKSE L D R++++DLK+N R RF+ I+Q+ P+ + + IA P+ + I
Sbjct: 86 PKESSLIKSETLNVDGRKFYVDLKENVRGRFLRIAQM-PMNPRQTRQQIAIPSDGIAEIH 144
Query: 435 GLISDLQQEHSCPEDEDGAPEGNYMRCNNKRFFFNVSKNGKGTFMRISEISTPS 488
++++ + +++ + NK F F+ KN +G F+RISEI S
Sbjct: 145 KVLTEYLAKFGEGHEQENTNTPK-ITAENKSFLFHSGKNDRGEFVRISEIKLNS 197
>MGI|MGI:1922279 [details] [associations]
symbol:Purg "purine-rich element binding protein G"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:1922279 Pfam:PF04845 GO:GO:0005634 GO:GO:0003677
eggNOG:NOG312871 HOGENOM:HOG000232132 HOVERGEN:HBG006888
OrthoDB:EOG4PRSRB InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 GeneTree:ENSGT00390000015406 CTD:29942 OMA:FGHTLGQ
EMBL:AF479672 EMBL:AF479673 EMBL:BC116406 IPI:IPI00153880
IPI:IPI00408500 RefSeq:NP_001091703.1 RefSeq:NP_690034.1
UniGene:Mm.159402 ProteinModelPortal:Q8R4E6 SMR:Q8R4E6
PhosphoSite:Q8R4E6 PaxDb:Q8R4E6 PRIDE:Q8R4E6
Ensembl:ENSMUST00000070340 Ensembl:ENSMUST00000078058 GeneID:75029
KEGG:mmu:75029 UCSC:uc009ljx.1 UCSC:uc009ljy.1 InParanoid:Q8R4E6
NextBio:342048 Bgee:Q8R4E6 CleanEx:MM_PURG Genevestigator:Q8R4E6
GermOnline:ENSMUSG00000049184 Uniprot:Q8R4E6
Length = 350
Score = 113 (44.8 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 418 GKLSSIAFPAQDL----GPIIGLISDLQQ----EHSCPEDED-GAPEGNYMRCNNKRFFF 468
G+ +I PAQ + ++ LI D + E C +D+ PEG R +NKRF+F
Sbjct: 220 GQDQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRCGDDDPLELPEGTSFRVDNKRFYF 279
Query: 469 NVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
+V N G F+++SE+ P + + K+
Sbjct: 280 DVGSNKYGIFLKVSEVRPPYRNTITVPFKA 309
Score = 100 (40.3 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEV-----NMDQTR-NQIHISM 352
+S I+ + +K K+FY D+KQS +F+KI+EV D R +++ +S+
Sbjct: 53 QSGGTSEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 112
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHR 376
SV L+D L + AH HR
Sbjct: 113 SVAAELKDCLGDFIEHYAHLGLKGHR 138
Score = 85 (35.0 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 381 HTI-KSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG 417
H++ K++ + +D R+Y+LDLK+N R RF+ I Q + G
Sbjct: 171 HSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRG 208
Score = 66 (28.3 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 793 VPPSYRASITIPERSWDRFIETF 815
V P YR +IT+P ++W RF E F
Sbjct: 295 VRPPYRNTITVPFKAWTRFGENF 317
Score = 62 (26.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 301 ANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQT 344
+ E V+ T + N+K+Y D+K+++ +F++I + M T
Sbjct: 166 SEEHPHSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGT 209
Score = 57 (25.1 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 437 ISDLQQEHSCPED--EDGAPEG-------NYMRCNNKRFFFNVSKNGKGTFMRISE 483
+S +Q+HS P G+ E +Y+ +N++++ ++ +N +G F+RI +
Sbjct: 148 VSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQ 203
Score = 57 (25.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 14/63 (22%), Positives = 34/63 (53%)
Query: 361 HLNALLTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKL 420
H +A T +Q+ ++ + + ++ +R++LD+K + R RF+ I+++ G+
Sbjct: 44 HYSASATPNQSGGTSEIQELASKRVDI---QKKRFYLDVKQSSRGRFLKIAEVWIGRGRQ 100
Query: 421 SSI 423
+I
Sbjct: 101 DNI 103
>UNIPROTKB|Q9UJV8 [details] [associations]
symbol:PURG "Purine-rich element-binding protein gamma"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF04845 GO:GO:0005634
GO:GO:0003677 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 EMBL:AF195513 EMBL:AY077841 EMBL:BC106708
IPI:IPI00002534 IPI:IPI00383017 RefSeq:NP_001015508.1
RefSeq:NP_037489.1 UniGene:Hs.373778 ProteinModelPortal:Q9UJV8
SMR:Q9UJV8 STRING:Q9UJV8 PhosphoSite:Q9UJV8 DMDM:74720969
PaxDb:Q9UJV8 PRIDE:Q9UJV8 Ensembl:ENST00000339382
Ensembl:ENST00000475541 GeneID:29942 KEGG:hsa:29942 UCSC:uc003xim.1
UCSC:uc003xin.3 CTD:29942 GeneCards:GC08M030853 HGNC:HGNC:17930
HPA:HPA047746 neXtProt:NX_Q9UJV8 PharmGKB:PA134879671
InParanoid:Q9UJV8 OMA:FGHTLGQ PhylomeDB:Q9UJV8 GenomeRNAi:29942
NextBio:52597 Bgee:Q9UJV8 CleanEx:HS_PURG Genevestigator:Q9UJV8
GermOnline:ENSG00000172733 Uniprot:Q9UJV8
Length = 347
Score = 107 (42.7 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 418 GKLSSIAFPAQDL----GPIIGLISD-----LQQEHSCPEDEDGAPEGNYMRCNNKRFFF 468
G+ +I PAQ + ++ LI D +++ +D PEG R +NKRF+F
Sbjct: 217 GQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYF 276
Query: 469 NVSKNGKGTFMRISEISTPSKVLTNIGIKS 498
+V N G F+++SE+ P + + K+
Sbjct: 277 DVGSNKYGIFLKVSEVRPPYRNTITVPFKA 306
Score = 101 (40.6 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 299 ESANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEV-----NMDQTR-NQIHISM 352
++ I+ + +K K+FY D+KQS +F+KI+EV D R +++ +S+
Sbjct: 50 QAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSL 109
Query: 353 SVVGHLRDHLNALLT--AHQNTPRHRYRDTHT 382
SV L+D L + AH HR H+
Sbjct: 110 SVAAELKDCLGDFIEHYAHLGLKGHRQEHGHS 141
Score = 85 (35.0 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 381 HTI-KSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVG 417
H++ K++ + +D R+Y+LDLK+N R RF+ I Q + G
Sbjct: 168 HSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRG 205
Score = 69 (29.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 793 VPPSYRASITIPERSWDRFIETFHQTCDLYKSAECSTSRPESQCD--KASDE 842
V P YR +IT+P ++W RF E F + + + C+ S E + D KAS E
Sbjct: 292 VRPPYRNTITVPFKAWTRFGENFIKYEEEMRKI-CN-SHKEKRMDGRKASGE 341
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 301 ANEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQT 344
+ E V+ T + N+K+Y D+K+++ +F++I + M T
Sbjct: 163 SEEHPHSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGT 206
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 7/27 (25%), Positives = 20/27 (74%)
Query: 457 NYMRCNNKRFFFNVSKNGKGTFMRISE 483
+Y+ +N++++ ++ +N +G F+RI +
Sbjct: 174 DYIERDNRKYYLDLKENQRGRFLRIRQ 200
Score = 55 (24.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 393 RRYFLDLKDNGRARFVTISQLLPVGGKLSSI 423
+R++LD+K + R RF+ I+++ G+ +I
Sbjct: 70 KRFYLDVKQSSRGRFLKIAEVWIGRGRQDNI 100
>UNIPROTKB|E2RJB4 [details] [associations]
symbol:EXD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 CTD:161829
GeneTree:ENSGT00390000003581 OMA:FQKQRRE EMBL:AAEX03016071
RefSeq:XP_535437.2 Ensembl:ENSCAFT00000015106 GeneID:478263
KEGG:cfa:478263 Uniprot:E2RJB4
Length = 569
Score = 202 (76.2 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 59/179 (32%), Positives = 95/179 (53%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 142 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 200
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 201 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 256
Query: 146 IG-LND-LLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L + L++ K++P +F + Q L +ENP +W TRPL+ +L A + LL L
Sbjct: 257 ISSLKESLIRHLKMAPKYLSFLEERQKLIQENPEVWFTRPLSPSLLKILALEATYLLPL 315
Score = 46 (21.3 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 16/95 (16%), Positives = 43/95 (45%)
Query: 262 IEEVNSNEYIWRNDYNVPLANAKLLNNPINRMFHKEKESANEERIEVIDTKMYQCFNKKF 321
++E + N+ ++P + + IN++ E E EE I + + + ++F
Sbjct: 433 LKEESKNKQALTEPQHLPPMKEEASEDCINKLICPESEVPEEEGI-ITQKEHSKILKQEF 491
Query: 322 Y--FDIKQSKSTKFIKISEVNMDQTRNQIHISMSV 354
+K+ + + ++ N++ T+ + +S S+
Sbjct: 492 RTSLSLKEEIAQLLMVENQENLNCTKQDVSVSPSL 526
>UNIPROTKB|E1BDE2 [details] [associations]
symbol:EXD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000003581
OMA:FQKQRRE EMBL:DAAA02028559 IPI:IPI00702155
ProteinModelPortal:E1BDE2 Ensembl:ENSBTAT00000011011 Uniprot:E1BDE2
Length = 573
Score = 198 (74.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 59/179 (32%), Positives = 92/179 (51%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 146 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 204
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 205 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---VETGGFLPNC 260
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L++ KI+P + F + Q RENP +W TRPL+ +L A + LL L
Sbjct: 261 ISTLQESLIRHLKIAPKHLSFLEVRQKWIRENPELWFTRPLSPSLLKILALEATYLLPL 319
>MGI|MGI:3045306 [details] [associations]
symbol:Exd1 "exonuclease 3'-5' domain containing 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 MGI:MGI:3045306
GO:GO:0003676 GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 eggNOG:NOG263976 OrthoDB:EOG4HMJ94 CTD:161829
EMBL:AK030132 EMBL:AL844536 EMBL:AL844862 EMBL:BC092241
IPI:IPI00228803 RefSeq:NP_766445.1 UniGene:Mm.212773
ProteinModelPortal:Q8CDF7 PhosphoSite:Q8CDF7 PRIDE:Q8CDF7
Ensembl:ENSMUST00000060009 Ensembl:ENSMUST00000171024 GeneID:241624
KEGG:mmu:241624 UCSC:uc008ltu.1 GeneTree:ENSGT00390000003581
HOGENOM:HOG000112411 InParanoid:Q8CDF7 OMA:FQKQRRE NextBio:385085
Bgee:Q8CDF7 Genevestigator:Q8CDF7 Uniprot:Q8CDF7
Length = 570
Score = 195 (73.7 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 57/179 (31%), Positives = 90/179 (50%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 143 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 201
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 202 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLNNVFDTQVA-DVLQFS---METGGFLPNC 257
Query: 146 IGL--NDLLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L++ K++P F + Q +ENP IW TRPL +L A + LL L
Sbjct: 258 ISTLQESLIRHLKVAPRYLFFLEERQKRIQENPEIWLTRPLPPSLLKILALETTYLLPL 316
>RGD|1561009 [details] [associations]
symbol:Exd1 "exonuclease 3'-5' domain containing 1"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
RGD:1561009 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:CH473949 OrthoDB:EOG4HMJ94 CTD:161829
GeneTree:ENSGT00390000003581 OMA:FQKQRRE IPI:IPI00390945
RefSeq:NP_001101231.1 UniGene:Rn.218587 Ensembl:ENSRNOT00000038365
GeneID:311334 KEGG:rno:311334 UCSC:RGD:1561009 NextBio:663357
Uniprot:D4AD21
Length = 562
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 57/179 (31%), Positives = 92/179 (51%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM I +S + + EG ++ GK+ + +A N ++++FD++ F+ L
Sbjct: 143 QKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDIFLLGSRAFNNGL 201
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 202 QMILEDKRILKVIHDCRWLSDCLSHQYGIMLSNVFDTQVA-DVLQFS---METGGFLPNC 257
Query: 146 IG-LND-LLKFYKISPNN--FKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L + L++ K++P F + Q +ENP +W TRPL +L A + LL L
Sbjct: 258 ISTLQECLIRHLKVAPKYLLFLEERQKQIQENPEVWLTRPLPPSLLKILALETAYLLPL 316
>UNIPROTKB|F1SSV1 [details] [associations]
symbol:LOC100621282 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000003581
OMA:FQKQRRE EMBL:FP015925 EMBL:CU633507 Ensembl:ENSSSCT00000005251
Uniprot:F1SSV1
Length = 568
Score = 193 (73.0 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 57/179 (31%), Positives = 91/179 (50%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +AM + +S + + EG ++ GK+ + +A N ++++FD+ F+ L
Sbjct: 145 QKFGAAMLHVKKQSVLSVAAEGANVCRHGKLCWLQVAT-NSRVYLFDILLLGSRAFNNGL 203
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 204 QMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNC 259
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L++ KI+P +F + Q +ENP +W TRPL+ +L A + LL L
Sbjct: 260 ISTLQESLIRHLKIAPKYLSFLEERQKRIQENPELWFTRPLSPSLLKILALEATYLLPL 318
>UNIPROTKB|H9L298 [details] [associations]
symbol:H9L298 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0005662 "DNA replication factor A
complex" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046332 "SMAD binding"
evidence=IEA] Pfam:PF04845 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 GeneTree:ENSGT00390000015406 EMBL:AADN02054251
EMBL:AADN02053424 EMBL:AADN02053725 EMBL:AADN02054007
EMBL:AADN02054250 Ensembl:ENSGALT00000035815 Uniprot:H9L298
Length = 274
Score = 161 (61.7 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 303 EERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHL 362
E+ + + +K NK+FY D+KQ+ +F+KI+EV +++++ +SM+V RD+L
Sbjct: 28 EQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDYL 87
Query: 363 NALLTAHQ----NTPRHRYRDT------------HTIKSEVLIKDTRRYFLDLKDNGRAR 406
+ + ++P + +KSE L+++ R+Y+LDLK+N R R
Sbjct: 88 GDFIEHYAQLGPSSPEQLAQAAGPGGDEGGSGPRRALKSEFLVRENRKYYLDLKENQRGR 147
Query: 407 FVTISQLLPVG 417
F+ I Q + G
Sbjct: 148 FLRIRQTVNRG 158
Score = 119 (46.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 383 IKSEVLIKDTRRYFLDLKDNGRARFVTISQLL---PVG---------GKLS--SIAFPAQ 428
+KSE L+++ R+Y+LDLK+N R RF+ I Q + P G G S +IA PAQ
Sbjct: 124 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPGGPGGFPGGPPGLQSGQTIALPAQ 183
Query: 429 DLGPIIGLISDLQQEHSCPEDEDGAP---------------EGNYMRCNNKRFFFNVSKN 473
L ++ L ++ EDE G P EG + ++KRFF V N
Sbjct: 184 GLIEFRDALAKLIDDYGGEEDELGGPGGGGPGGGGLYGELPEGTSITVDSKRFF-EVGCN 242
Query: 474 GKGTFMRISEISTPS 488
G F+R+ + PS
Sbjct: 243 KYGVFLRVKGVK-PS 256
Score = 58 (25.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 793 VPPSYRASITIPERSW 808
V PSYR +IT+P R+W
Sbjct: 253 VKPSYRNAITVPFRAW 268
>UNIPROTKB|Q8NHP7 [details] [associations]
symbol:EXD1 "Exonuclease 3'-5' domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG263976 OrthoDB:EOG4HMJ94 EMBL:AK123414 EMBL:AK292524
EMBL:BC030628 IPI:IPI00446611 IPI:IPI01011120 RefSeq:NP_689809.2
UniGene:Hs.307999 ProteinModelPortal:Q8NHP7 SMR:Q8NHP7
PhosphoSite:Q8NHP7 DMDM:189037934 PaxDb:Q8NHP7 PRIDE:Q8NHP7
DNASU:161829 Ensembl:ENST00000314992 GeneID:161829 KEGG:hsa:161829
UCSC:uc001znj.3 UCSC:uc001znk.3 CTD:161829 GeneCards:GC15M041474
HGNC:HGNC:28507 HPA:HPA039388 neXtProt:NX_Q8NHP7
PharmGKB:PA164719420 InParanoid:Q8NHP7 PhylomeDB:Q8NHP7
GenomeRNAi:161829 NextBio:88118 ArrayExpress:Q8NHP7 Bgee:Q8NHP7
CleanEx:HS_EXDL1 Genevestigator:Q8NHP7 Uniprot:Q8NHP7
Length = 514
Score = 178 (67.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 53/179 (29%), Positives = 91/179 (50%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 86 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVAT-NCRVYLFDIFLLGSRAFHNGL 144
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 145 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 200
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L+K +++P +F + Q L +ENP +W RP++ +L A + LL L
Sbjct: 201 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPL 259
Score = 39 (18.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 249 RKDLMSSKRPYPYIEEVNSNEYIWRNDY-NVP 279
RK ++S+ P P +E+++S W + + N+P
Sbjct: 487 RKTVVSTLPPCPALEKIDS----WISPFLNLP 514
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 369 HQNTPRHRYRDTHTIKSE 386
H TP+H ++ + ++K E
Sbjct: 429 HFMTPKHEFQASLSLKEE 446
>GENEDB_PFALCIPARUM|MAL8P1.35 [details] [associations]
symbol:MAL8P1.35 "exonuclease, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL844507
RefSeq:XP_001349283.1 ProteinModelPortal:Q8IB75
EnsemblProtists:MAL8P1.35:mRNA GeneID:2655376 KEGG:pfa:MAL8P1.35
EuPathDB:PlasmoDB:PF3D7_0824100 HOGENOM:HOG000282618
ProtClustDB:CLSZ2433017 Uniprot:Q8IB75
Length = 406
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 60/233 (25%), Positives = 111/233 (47%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNG-----------KIFI 70
I + +E + A I + +D EG +LG GKV L+ + ++ K +I
Sbjct: 82 IENEKECEEAAEEINRSEIIAIDFEGTNLGRYGKVCLMQVYVEKKNMNEQSDNILQKYYI 141
Query: 71 FDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
FD+ +I +++E+ + LK+IH D+ L + ++L+NVYDT A L
Sbjct: 142 FDLLKTSVIK---SAQKIIENKKTLKLIHDCREDSSALYNQLGMKLENVYDTSRAHLLLM 198
Query: 131 LSDPRLLSQDLVPHTIG--LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLL 188
+ D+ + +ND L S + KK +Y+ N IW+TRPL++ ++
Sbjct: 199 EKQKK---NDIYQVSFAQLINDYLGINDASLSFIKKE---MYK-NEKIWETRPLSNISII 251
Query: 189 YAAADVESLLALFH----RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKR 237
YA +V+ L L+ + K+ L++++ + N Y + + +P ++ KR
Sbjct: 252 YALKNVKYLYKLYKIFDKLLPKKLVLEKSKEFV-NYCYLN-YEYKLPNDLAKR 302
>UNIPROTKB|Q8IB75 [details] [associations]
symbol:MAL8P1.35 "Exonuclease, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL844507 RefSeq:XP_001349283.1
ProteinModelPortal:Q8IB75 EnsemblProtists:MAL8P1.35:mRNA
GeneID:2655376 KEGG:pfa:MAL8P1.35 EuPathDB:PlasmoDB:PF3D7_0824100
HOGENOM:HOG000282618 ProtClustDB:CLSZ2433017 Uniprot:Q8IB75
Length = 406
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 60/233 (25%), Positives = 111/233 (47%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNG-----------KIFI 70
I + +E + A I + +D EG +LG GKV L+ + ++ K +I
Sbjct: 82 IENEKECEEAAEEINRSEIIAIDFEGTNLGRYGKVCLMQVYVEKKNMNEQSDNILQKYYI 141
Query: 71 FDVYSCPLIMFDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQ 130
FD+ +I +++E+ + LK+IH D+ L + ++L+NVYDT A L
Sbjct: 142 FDLLKTSVIK---SAQKIIENKKTLKLIHDCREDSSALYNQLGMKLENVYDTSRAHLLLM 198
Query: 131 LSDPRLLSQDLVPHTIG--LNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLL 188
+ D+ + +ND L S + KK +Y+ N IW+TRPL++ ++
Sbjct: 199 EKQKK---NDIYQVSFAQLINDYLGINDASLSFIKKE---MYK-NEKIWETRPLSNISII 251
Query: 189 YAAADVESLLALFH----RMTKEYALKQNRLLLDNLIYETLFNHVVPLNIRKR 237
YA +V+ L L+ + K+ L++++ + N Y + + +P ++ KR
Sbjct: 252 YALKNVKYLYKLYKIFDKLLPKKLVLEKSKEFV-NYCYLN-YEYKLPNDLAKR 302
>UNIPROTKB|B7Z839 [details] [associations]
symbol:EXD1 "cDNA FLJ55584" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 UniGene:Hs.307999 HGNC:HGNC:28507
HOGENOM:HOG000112411 OMA:FQKQRRE EMBL:AC012652 EMBL:AC022408
EMBL:AK302864 IPI:IPI00169284 SMR:B7Z839 Ensembl:ENST00000458580
UCSC:uc010ucv.2 HOVERGEN:HBG106303 Uniprot:B7Z839
Length = 572
Score = 178 (67.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 53/179 (29%), Positives = 91/179 (50%)
Query: 26 QEAQSAMATILNESKVGLDLEGMDLGVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKL 85
Q+ +A+ I ++ + + EG ++ GK+ + +A N ++++FD++ F L
Sbjct: 144 QKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVAT-NCRVYLFDIFLLGSRAFHNGL 202
Query: 86 HEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHT 145
+LE RILKVIH + L + I L NV+DTQ A LQ S + + +P+
Sbjct: 203 QMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGYLPNC 258
Query: 146 IGL--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
I L+K +++P +F + Q L +ENP +W RP++ +L A + LL L
Sbjct: 259 ITTLQESLIKHLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPL 317
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 249 RKDLMSSKRPYPYIEEVNSNEYIWRNDY-NVP 279
RK ++S+ P P +E+++S W + + N+P
Sbjct: 545 RKTVVSTLPPCPALEKIDS----WISPFLNLP 572
Score = 38 (18.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 369 HQNTPRHRYRDTHTIKSE 386
H TP+H ++ + ++K E
Sbjct: 487 HFMTPKHEFQASLSLKEE 504
>UNIPROTKB|I3LGH8 [details] [associations]
symbol:I3LGH8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 GeneTree:ENSGT00390000003581
Ensembl:ENSSSCT00000031157 OMA:HIIRIRE Uniprot:I3LGH8
Length = 198
Score = 144 (55.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/117 (36%), Positives = 60/117 (51%)
Query: 88 VLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIG 147
VLE RILKVIH + L + I L NV+DTQ A LQ S + + +P+ I
Sbjct: 2 VLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVA-DVLQFS---METGGFLPNCIS 57
Query: 148 L--NDLLKFYKISPN--NFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLAL 200
L++ KI+P +F + Q +ENP +W TRPL+ +L A + LL L
Sbjct: 58 TLQESLIRHLKIAPKYLSFLEERQKRIQENPELWFTRPLSPSLLKILALEATYLLPL 114
>WB|WBGene00015680 [details] [associations]
symbol:egal-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0002009 "morphogenesis of
an epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0002009 GO:GO:0018996 GO:GO:0040011
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
EMBL:FO080389 PIR:T29937 RefSeq:NP_001021323.1
ProteinModelPortal:Q17902 DIP:DIP-26632N IntAct:Q17902
MINT:MINT-1059848 STRING:Q17902 PaxDb:Q17902 PRIDE:Q17902
EnsemblMetazoa:C10G6.1a.1 EnsemblMetazoa:C10G6.1a.2
EnsemblMetazoa:C10G6.1a.3 GeneID:177352 KEGG:cel:CELE_C10G6.1
UCSC:C10G6.1b.1 CTD:177352 WormBase:C10G6.1a eggNOG:NOG282728
GeneTree:ENSGT00520000059274 HOGENOM:HOG000021733 InParanoid:Q17902
OMA:HDKFGKP NextBio:896406 ArrayExpress:Q17902 Uniprot:Q17902
Length = 574
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 50/171 (29%), Positives = 84/171 (49%)
Query: 38 ESKV-GLDLEGMDLGVDGKVSL-VSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
E KV GLDL+ + +GVDG++ L + + +I IFD+ S +I+ + +LES++++
Sbjct: 314 EKKVVGLDLKTVTVGVDGEIFLSLGVIATTSQIGIFDLASSDVIILESGFKGILESEKVV 373
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KVIH A A L + + ++NV+DTQ A + LQ ++ P I +L + Y
Sbjct: 374 KVIHDARRVASLLAHKYAVHMRNVFDTQVAHSLLQHEKFNKSLNEMRP--ISFINLQRVY 431
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
P+ W RP+T + L + LL AL+ ++
Sbjct: 432 YPQSIMLSDVTPRKMSMCPN-WGVRPITEEFQLTIVEEAHCLLSALYQSLS 481
>UNIPROTKB|Q17902 [details] [associations]
symbol:egal-1 "Protein EGAL-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0002009 GO:GO:0018996 GO:GO:0040011
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
EMBL:FO080389 PIR:T29937 RefSeq:NP_001021323.1
ProteinModelPortal:Q17902 DIP:DIP-26632N IntAct:Q17902
MINT:MINT-1059848 STRING:Q17902 PaxDb:Q17902 PRIDE:Q17902
EnsemblMetazoa:C10G6.1a.1 EnsemblMetazoa:C10G6.1a.2
EnsemblMetazoa:C10G6.1a.3 GeneID:177352 KEGG:cel:CELE_C10G6.1
UCSC:C10G6.1b.1 CTD:177352 WormBase:C10G6.1a eggNOG:NOG282728
GeneTree:ENSGT00520000059274 HOGENOM:HOG000021733 InParanoid:Q17902
OMA:HDKFGKP NextBio:896406 ArrayExpress:Q17902 Uniprot:Q17902
Length = 574
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 50/171 (29%), Positives = 84/171 (49%)
Query: 38 ESKV-GLDLEGMDLGVDGKVSL-VSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRIL 95
E KV GLDL+ + +GVDG++ L + + +I IFD+ S +I+ + +LES++++
Sbjct: 314 EKKVVGLDLKTVTVGVDGEIFLSLGVIATTSQIGIFDLASSDVIILESGFKGILESEKVV 373
Query: 96 KVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFY 155
KVIH A A L + + ++NV+DTQ A + LQ ++ P I +L + Y
Sbjct: 374 KVIHDARRVASLLAHKYAVHMRNVFDTQVAHSLLQHEKFNKSLNEMRP--ISFINLQRVY 431
Query: 156 KISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLL-ALFHRMT 205
P+ W RP+T + L + LL AL+ ++
Sbjct: 432 YPQSIMLSDVTPRKMSMCPN-WGVRPITEEFQLTIVEEAHCLLSALYQSLS 481
>TAIR|locus:2045497 [details] [associations]
symbol:PUR ALPHA-1 "AT2G32080" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0006833 "water transport" evidence=RCA] [GO:0006970 "response
to osmotic stress" evidence=RCA] [GO:0007030 "Golgi organization"
evidence=RCA] [GO:0007033 "vacuole organization" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009750
"response to fructose stimulus" evidence=RCA] [GO:0048767 "root
hair elongation" evidence=RCA] Pfam:PF04845 GO:GO:0005634
GO:GO:0005737 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AC006223
eggNOG:NOG312871 OMA:REKRACE InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 EMBL:AF136152 EMBL:AF419556 EMBL:AF446882
EMBL:AY052714 IPI:IPI00536753 IPI:IPI00546693 PIR:G84728
RefSeq:NP_565736.1 RefSeq:NP_850182.1 UniGene:At.25473
ProteinModelPortal:Q9SKZ1 SMR:Q9SKZ1 STRING:Q9SKZ1 PaxDb:Q9SKZ1
PRIDE:Q9SKZ1 DNASU:817768 EnsemblPlants:AT2G32080.1 GeneID:817768
KEGG:ath:AT2G32080 TAIR:At2g32080 HOGENOM:HOG000029731
InParanoid:Q9SKZ1 PhylomeDB:Q9SKZ1 ProtClustDB:CLSN2688621
Genevestigator:Q9SKZ1 Uniprot:Q9SKZ1
Length = 296
Score = 116 (45.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 306 IEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQIHISMSVVGHLRDHLNAL 365
+E++ +K Q +K FYFD+K++ +++KISE TR+ I + S + D N
Sbjct: 29 VELV-SKTLQVEHKLFYFDLKENPRGRYLKISE-KTSATRSTIIVPSSGISWFLDLFNYY 86
Query: 366 LTAHQNTPRHRYRDTHTIKSEVLIKDTRRYFLDLKDNGRARFVTISQLLPVGGKLSSIAF 425
+ + + H + S+ L D++ ++ D+ +N R RF+ +S+ V S+I
Sbjct: 87 VNSEE----------HELFSKELQLDSKVFYFDIGENRRGRFLKVSEA-SVSRNRSTIIV 135
Query: 426 PA 427
PA
Sbjct: 136 PA 137
Score = 81 (33.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 447 PEDEDGAPEG--NYMRCNNKRFFFNVSKNGKGTFMRISEI--STPSKVLTNI-GIK 497
P E+ G +R + KRFFF++ N +G F+RISE+ S S ++ + G+K
Sbjct: 208 PGQEETGMTGVSKVIRADQKRFFFDLGNNNRGHFLRISEVAGSDRSSIILPLSGLK 263
Score = 81 (33.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 302 NEERIEVIDTKMYQCFNKKFYFDIKQSKSTKFIKISEVNMDQTRNQI 348
N E E+ +K Q +K FYFDI +++ +F+K+SE ++ + R+ I
Sbjct: 88 NSEEHELF-SKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTI 133
>ZFIN|ZDB-GENE-060825-267 [details] [associations]
symbol:zgc:154068 "zgc:154068" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 ZFIN:ZDB-GENE-060825-267
GO:GO:0003676 GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:BC122448 IPI:IPI00786714 RefSeq:NP_001038930.1
UniGene:Dr.84540 ProteinModelPortal:Q0P3U3 GeneID:751755
KEGG:dre:751755 eggNOG:NOG263976 OrthoDB:EOG4HMJ94 NextBio:20917894
Uniprot:Q0P3U3
Length = 378
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 31 AMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKI-FIFDVYSCPLIMFDGKLHEV 88
A+ I + +G+ G D+ G G+ L L + K+ ++FD+ F L +
Sbjct: 127 AVMHIQEQDVIGI---GADVYGQSGQERLCWLQVATKKVVYLFDILLLGGPAFKNGLSMI 183
Query: 89 LESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQLSDPRLLSQDL---VPHT 145
LE+ ILKV+H L + F ++L NV+DTQ A L ++ D +P
Sbjct: 184 LENTHILKVLHDCRCITRCLRTEFRVQLTNVFDTQVAELLLFFNESGGFLPDRPASLPEL 243
Query: 146 IGLNDLLKFYKISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRMT 205
+ L+ L +I P K Q RE +W RP D+L + V+ LL+L +
Sbjct: 244 LQLHLRLTTAEIQPLCSK---QQQSRECVQLWYVRPCPPDLLSLMCSSVQHLLSL-RLLL 299
Query: 206 KEYALKQNRLLLDNLIYETLFNHVVPLNIRK 236
+ L +L+D+ + + H PL+ ++
Sbjct: 300 LDALLADYTVLVDSFMSSS---HCPPLHFQQ 327
>UNIPROTKB|Q14191 [details] [associations]
symbol:WRN "Werner syndrome ATP-dependent helicase"
species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0040009
"regulation of growth rate" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031297 "replication fork processing" evidence=IMP;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0010259 "multicellular organismal aging" evidence=IMP]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0007568 "aging" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA;IMP]
[GO:0004386 "helicase activity" evidence=IDA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0000731 "DNA synthesis involved
in DNA repair" evidence=IDA] [GO:0010225 "response to UV-C"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0043138 "3'-5' DNA helicase
activity" evidence=IDA] [GO:0000405 "bubble DNA binding"
evidence=IDA] [GO:0009378 "four-way junction helicase activity"
evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IDA] [GO:0051345
"positive regulation of hydrolase activity" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0071480 "cellular response to gamma
radiation" evidence=IDA] [GO:0004527 "exonuclease activity"
evidence=IDA] [GO:0009267 "cellular response to starvation"
evidence=IDA] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP;IDA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 GO:GO:0005524
GO:GO:0005813 Pathway_Interaction_DB:telomerasepathway
GO:GO:0042803 GO:GO:0005654 GO:GO:0006979 GO:GO:0005730
GO:GO:0042981 GO:GO:0032403 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 GO:GO:0004003 SUPFAM:SSF53098
MIM:114500 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345 GO:GO:0010259
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GO:GO:0000723 GO:GO:0010225 GO:GO:0007569 eggNOG:COG0514
Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403
GO:GO:0000731 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
GO:GO:0031297 GO:GO:0043138 GO:GO:0032066 KO:K10900 EMBL:L76937
EMBL:AY818673 EMBL:AF091214 EMBL:AF181897 EMBL:AF181896
EMBL:AY442327 EMBL:AC084736 IPI:IPI00029107 RefSeq:NP_000544.2
UniGene:Hs.632050 PDB:2AXL PDB:2DGZ PDB:2E1E PDB:2E1F PDB:2FBT
PDB:2FBV PDB:2FBX PDB:2FBY PDB:2FC0 PDB:3AAF PDBsum:2AXL
PDBsum:2DGZ PDBsum:2E1E PDBsum:2E1F PDBsum:2FBT PDBsum:2FBV
PDBsum:2FBX PDBsum:2FBY PDBsum:2FC0 PDBsum:3AAF DisProt:DP00443
ProteinModelPortal:Q14191 SMR:Q14191 DIP:DIP-31380N IntAct:Q14191
MINT:MINT-95856 STRING:Q14191 PhosphoSite:Q14191 DMDM:6136393
PaxDb:Q14191 PRIDE:Q14191 Ensembl:ENST00000298139 GeneID:7486
KEGG:hsa:7486 UCSC:uc003xio.4 CTD:7486 GeneCards:GC08P030948
H-InvDB:HIX0007441 HGNC:HGNC:12791 HPA:HPA028661 MIM:277700
MIM:604611 neXtProt:NX_Q14191 Orphanet:902 PharmGKB:PA367
HOGENOM:HOG000146447 HOVERGEN:HBG000325 InParanoid:Q14191
OMA:GIEGDQW OrthoDB:EOG4DNF3J PhylomeDB:Q14191
EvolutionaryTrace:Q14191 GenomeRNAi:7486 NextBio:29326 Bgee:Q14191
CleanEx:HS_WRN Genevestigator:Q14191 GermOnline:ENSG00000165392
Uniprot:Q14191
Length = 1432
Score = 139 (54.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 57/191 (29%), Positives = 89/191 (46%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E L G GKV+L+ L + K ++F V S + +F L +LE+ + K
Sbjct: 79 VGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSS--MSVFPQGLKMLLENKAVKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LKN + T A L+ ++ L+ LV H +G LLK
Sbjct: 137 GVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNS-LVKHLLG-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM------TKEYAL 210
I +N W PLT D LYAA D + ++ + + +A+
Sbjct: 195 IRCSN---------------WSKFPLTEDQKLYAATDAYAGFIIYRNLEILDDTVQRFAI 239
Query: 211 -KQNRLLLDNL 220
K+ +LL ++
Sbjct: 240 NKEEEILLSDM 250
>UNIPROTKB|Q95Z10 [details] [associations]
symbol:RRP6 "Rrp6p homologue" species:5691 "Trypanosoma
brucei" [GO:0000178 "exosome (RNase complex)" evidence=IDA]
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR010997
InterPro:IPR012337 InterPro:IPR012588 Pfam:PF00570 Pfam:PF01612
Pfam:PF08066 PROSITE:PS50967 SMART:SM00474 GO:GO:0000166
GO:GO:0003676 GO:GO:0006396 SUPFAM:SSF53098 GO:GO:0000178
GO:GO:0008408 SUPFAM:SSF47819 GO:GO:0000176 EMBL:AJ309000
ProteinModelPortal:Q95Z10 IntAct:Q95Z10 STRING:Q95Z10
EuPathDB:TriTrypDB:Tb427.04.1630 EuPathDB:TriTrypDB:Tb927.4.1630
Uniprot:Q95Z10
Length = 703
Score = 109 (43.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 22 ITDVQEAQSAMATILNESKVGLDLEGMDL-GVDGKVSLVSLALQNGKIFIFDVYSCPLIM 80
+ V++ ++ +A +LNE+++ +DLE D G L+ ++ + + FI D M
Sbjct: 216 VDTVEDLEALVAVLLNETEIAVDLEHHDFYSYQGFTCLMQISTRT-QDFIVDCLKVRANM 274
Query: 81 FDGKLHEVLESDRILKVIHGAFGDAGGLLSNFNIRLKNVYDTQCAFTALQL 131
+ + V I+KV HGA D L +F + + N++DT A L +
Sbjct: 275 Y--LMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSIALQNLHM 323
Score = 65 (27.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 177 WKTRPLTSDMLLYAAADVESLLALFHRMTKEYALK-QNRLLLDNLI 221
W+ RP+ ++M+ YA D LL ++ R+ K+ L + R + N++
Sbjct: 348 WRVRPIPAEMVSYAQQDTHFLLYVYDRL-KQLLLNCEARASVGNML 392
>UNIPROTKB|F1RX70 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000017248 Uniprot:F1RX70
Length = 1409
Score = 124 (48.7 bits), Expect = 0.00096, P = 0.00096
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 41 VGLDLEGMDL---GVDGKVSLVSLALQNGKIFIFDVYSCPLIMFDGKLHEVLESDRILKV 97
VG D+E + G G+++L+ L + K ++F + S + +F L +LE++ I K
Sbjct: 79 VGFDMEWPPVYNKGKLGRIALIQLCVSESKCYLFHISS--MSVFPQGLKMLLENEAIKKA 136
Query: 98 IHGAFGDAGGLLSNFNIRLKNVYD-TQCAFTALQLSDPRLLSQDLVPHTIGLNDLLKFYK 156
G GD LL +F+I+LK+ + T A L+ ++ L+ LV H LLK
Sbjct: 137 GVGIKGDQSKLLRDFDIKLKSFVELTDVANEKLKCAETWSLN-GLVKHLFS-KQLLKDKS 194
Query: 157 ISPNNFKKNIQNLYRENPHIWKTRPLTSDMLLYAAADVESLLALFHRM 204
I +N W PLT D LYAA D + ++ ++
Sbjct: 195 IRCSN---------------WSNFPLTEDQKLYAATDAYAGFIIYQKL 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 843 651 0.00095 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 612 (65 KB)
Total size of DFA: 327 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.93u 0.18s 52.11t Elapsed: 00:00:03
Total cpu time: 51.94u 0.18s 52.12t Elapsed: 00:00:03
Start: Thu Aug 15 13:55:21 2013 End: Thu Aug 15 13:55:24 2013