Query psy5653
Match_columns 740
No_of_seqs 287 out of 3306
Neff 10.5
Searched_HMMs 46136
Date Fri Aug 16 23:13:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5653.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5653hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15101 protease3; Provisiona 100.0 4.2E-53 9.2E-58 497.2 49.8 678 15-722 37-929 (961)
2 KOG0959|consensus 100.0 8.3E-51 1.8E-55 440.4 47.0 690 14-721 20-925 (974)
3 KOG0960|consensus 100.0 3.4E-49 7.4E-54 373.2 35.7 408 332-740 58-467 (467)
4 COG1025 Ptr Secreted/periplasm 100.0 7.4E-48 1.6E-52 409.2 46.3 687 14-722 16-909 (937)
5 COG0612 PqqL Predicted Zn-depe 100.0 3E-41 6.5E-46 361.2 39.9 394 323-727 28-436 (438)
6 KOG2067|consensus 100.0 9.3E-38 2E-42 296.2 30.6 395 336-735 53-457 (472)
7 PTZ00432 falcilysin; Provision 100.0 3E-34 6.5E-39 331.7 45.0 351 359-728 712-1109(1119)
8 TIGR02110 PQQ_syn_pqqF coenzym 100.0 4.3E-34 9.3E-39 309.2 39.4 318 322-654 10-345 (696)
9 PRK15101 protease3; Provisiona 100.0 1E-33 2.2E-38 333.2 37.0 391 322-723 54-463 (961)
10 KOG0960|consensus 100.0 1.5E-33 3.2E-38 267.4 19.3 333 17-374 29-434 (467)
11 COG1026 Predicted Zn-dependent 100.0 2.1E-28 4.5E-33 262.4 41.4 346 358-723 578-959 (978)
12 PTZ00432 falcilysin; Provision 100.0 7.4E-29 1.6E-33 287.1 36.4 377 337-723 120-575 (1119)
13 TIGR02110 PQQ_syn_pqqF coenzym 100.0 2E-27 4.2E-32 257.6 36.1 538 23-636 1-695 (696)
14 COG1025 Ptr Secreted/periplasm 99.9 2.2E-23 4.7E-28 223.3 35.1 391 322-723 34-442 (937)
15 KOG0959|consensus 99.9 6.9E-22 1.5E-26 216.1 33.6 375 335-722 56-446 (974)
16 KOG2019|consensus 99.9 6.5E-21 1.4E-25 193.5 37.8 356 359-739 613-997 (998)
17 KOG2583|consensus 99.9 8.6E-21 1.9E-25 181.9 35.1 383 326-731 36-429 (429)
18 KOG2067|consensus 99.9 8.6E-23 1.9E-27 194.8 21.3 332 20-375 23-431 (472)
19 COG0612 PqqL Predicted Zn-depe 99.9 7.6E-22 1.7E-26 211.5 29.8 350 18-497 13-432 (438)
20 COG1026 Predicted Zn-dependent 99.9 1.3E-21 2.9E-26 210.6 30.5 394 321-725 31-461 (978)
21 PF05193 Peptidase_M16_C: Pept 99.8 4.3E-20 9.2E-25 174.1 18.4 178 469-655 1-184 (184)
22 KOG2019|consensus 99.8 9.5E-18 2.1E-22 170.8 27.7 383 333-726 75-499 (998)
23 KOG0961|consensus 99.8 6.8E-16 1.5E-20 157.2 39.7 312 384-710 632-970 (1022)
24 KOG0961|consensus 99.8 3.1E-16 6.6E-21 159.7 27.9 371 340-722 49-456 (1022)
25 PF00675 Peptidase_M16: Insuli 99.6 3.5E-14 7.6E-19 127.7 13.7 141 323-463 2-148 (149)
26 KOG2583|consensus 99.4 3.9E-13 8.4E-18 129.8 10.2 139 20-161 21-199 (429)
27 PF00675 Peptidase_M16: Insuli 99.4 9.7E-13 2.1E-17 118.3 9.4 106 32-139 1-148 (149)
28 PF08367 M16C_assoc: Peptidase 96.9 0.037 8.1E-07 54.1 15.7 73 358-432 121-204 (248)
29 PF03410 Peptidase_M44: Protei 95.1 0.017 3.6E-07 58.7 3.2 65 25-99 2-68 (590)
30 PF05193 Peptidase_M16_C: Pept 94.5 0.062 1.3E-06 49.7 5.4 154 147-319 3-184 (184)
31 PHA03081 putative metalloprote 92.9 0.088 1.9E-06 53.7 3.3 63 25-97 2-66 (595)
32 PF03410 Peptidase_M44: Protei 57.2 2.1E+02 0.0046 30.3 12.3 152 345-517 35-194 (590)
33 PF08367 M16C_assoc: Peptidase 49.0 2.6E+02 0.0057 27.2 12.1 116 537-659 84-206 (248)
34 PHA03081 putative metalloprote 48.7 2.9E+02 0.0064 29.4 11.8 129 380-517 58-194 (595)
35 cd08814 DED_Caspase_10_repeat2 31.1 2.5E+02 0.0054 21.7 6.6 73 631-708 3-77 (79)
36 PF09186 DUF1949: Domain of un 27.0 2.2E+02 0.0047 19.7 6.0 46 365-410 8-53 (56)
37 PF09851 SHOCT: Short C-termin 25.7 1.6E+02 0.0035 17.8 4.2 28 401-428 3-30 (31)
38 cd08804 Death_ank2 Death domai 22.8 3.7E+02 0.0081 20.9 6.8 65 634-705 16-83 (84)
39 PF01729 QRPTase_C: Quinolinat 21.1 1.1E+02 0.0024 27.7 3.4 43 465-507 104-147 (169)
40 cd08317 Death_ank Death domain 20.2 4.2E+02 0.0091 20.5 7.8 74 625-705 7-83 (84)
No 1
>PRK15101 protease3; Provisional
Probab=100.00 E-value=4.2e-53 Score=497.23 Aligned_cols=678 Identities=12% Similarity=0.064 Sum_probs=450.1
Q ss_pred cCCCCCCcEEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc-------CCCCc
Q psy5653 15 KSVNVPSTQVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI-------KPEYG 86 (740)
Q Consensus 15 ~~~~~~~~~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~-------~~~~~ 86 (740)
++.+.+.|++.+|+|||+|+ ++++..|+++++++|++||++||++++|+|||||||||+||++++.. ...||
T Consensus 37 ~~~d~~~~~~~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg 116 (961)
T PRK15101 37 SEKDPRQYQAIRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGG 116 (961)
T ss_pred CCCCccceEEEEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCC
Confidence 66788899999999999999 89999999999999999999999999999999999999999988531 22377
Q ss_pred chhhhhhhhhhh-----------------------cccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCC
Q psy5653 87 PLLVELSEEQVY-----------------------MHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQ 131 (740)
Q Consensus 87 ~~~~~~~~~~~~-----------------------~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~ 131 (740)
..||+|..+.|. |.|+++++++|++ +|.+|+.. +...+++.|+
T Consensus 117 ~~NA~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~--~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp 194 (961)
T PRK15101 117 SHNASTASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERN--AVNAELTMARSRDGMRMAQVSAETINPAHP 194 (961)
T ss_pred CccceECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHH--HHHHHHHHhcCCHHHHHHHHHHhhCCCCCC
Confidence 888888666553 6667799999999 99999764 2345667899
Q ss_pred CCccccccHHHHHHh----hHhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCcccccccccccCC--
Q psy5653 132 NGRNIVLSNREIRLL----RYLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEGEMLSLDSVISG-- 193 (740)
Q Consensus 132 ~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (740)
+++...|+...+..+ +..++..++..+|.+... +..++.+.|+.|+.+..............
T Consensus 195 ~~~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~ 274 (961)
T PRK15101 195 GSRFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVPVVTDAQ 274 (961)
T ss_pred cccCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCHHH
Confidence 999999999999775 588999999999886444 56667889999976432111000000000
Q ss_pred CC-----CCCCCCCccCcccCCCCCCCchhh----HHHHHHHhcc---chhhhhhHHHHHHHHHhhccccccc-CCccch
Q psy5653 194 RS-----TPSDSGSCSGDIISPTEPLSLTDS----MLLMDDILSD---SRLDQLDRIERIEAILTAENVAQIK-PEYGPL 260 (740)
Q Consensus 194 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~il~~---s~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 260 (740)
.. .+. ..+....+.++.... .+++ ..++..++|+ ++|.... .+++.++...+...... .+.+.+
T Consensus 275 ~~~~~~~~~~-~~~~~l~l~~~~p~~-~~~~~~~~~~~l~~ll~~~~~g~l~~~L-~~~gla~~v~s~~~~~~~~~~g~f 351 (961)
T PRK15101 275 KGIIIHYVPA-QPRKVLRVEFRIDNN-SAKFRSKTDEYISYLIGNRSPGTLSDWL-QKQGLAEGISAGADPMVDRNSGVF 351 (961)
T ss_pred cCeEEEEEEC-CCCcEEEEEEecCCc-HHHHhhCHHHHHHHHhcCCCCCcHHHHH-HHcCccceeeeccccccCCCceEE
Confidence 00 011 122223333332111 1111 3456677775 2344444 35555554433221110 000000
Q ss_pred hhhhhccceeeeecCc----------------------------------------------------------------
Q psy5653 261 LVELSEEQVYMHIKPN---------------------------------------------------------------- 276 (740)
Q Consensus 261 ~~~l~~~~~~~~~~p~---------------------------------------------------------------- 276 (740)
.+.+.+.|.
T Consensus 352 -------~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (961)
T PRK15101 352 -------AISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPV 424 (961)
T ss_pred -------EEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCH
Confidence 111111110
Q ss_pred --------------------------------------hhHHh---hhhcccChhHHHHHHHHHHHhhhccC--------
Q psy5653 277 --------------------------------------EVRQR---KKQRKIDNEDMTFSVQHEWIRLCKTV-------- 307 (740)
Q Consensus 277 --------------------------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 307 (740)
..... -.+++|+++++...+.+.|.......
T Consensus 425 ~~~l~~~~~~~~~~~~~i~~~~~~l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~~~~l~lP~~n 504 (961)
T PRK15101 425 EHTLDAPYIADRYDPKAIKARLAEMTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQKAQNIALSLPELN 504 (961)
T ss_pred HHheeCchhhhcCCHHHHHHHHhhcCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcCCCCccCCCCCCC
Confidence 00000 01336777788888888886532211
Q ss_pred ----ChhHHHHH----------hhhccceEEEeccC---CCCceecccceecccCCcc-chhhHHHhhccCCCCChhHHH
Q psy5653 308 ----TPAEVERA----------KNLLKSNLFLQLDG---TTPVCEDIGRQILCYGRRV-PLHELEARIDGTSKRSQTDLE 369 (740)
Q Consensus 308 ----s~~el~~~----------k~~l~~~~~~~~d~---~~~~~~~ig~~~~~~~~~~-~~~~l~~~~~gt~~~~~~~l~ 369 (740)
++..+... ....+..+++.+++ ..|.+.............. ....+..++.........++.
T Consensus 505 ~fip~~~~~~~~~~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~~l~e~~ 584 (961)
T PRK15101 505 PYIPDDFSLIKADKAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAGLALDQLS 584 (961)
T ss_pred CccCCCCeeccCCCCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111110 01111234555555 3344432221111111111 111222233333345566788
Q ss_pred HHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHH
Q psy5653 370 LEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVE-TNLQEVVFDHLHA 448 (740)
Q Consensus 370 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~-~~p~~~~~~~~~~ 448 (740)
+..+.+|++++.. +.+++.+++++++++++.+|+++.+.+.+|.|++++|+++|+.+++++++.. ..+...+...+
T Consensus 585 y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~-- 661 (961)
T PRK15101 585 NQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAEKGKAYEQAIMPA-- 661 (961)
T ss_pred chHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhcccCcHHHHHHHH--
Confidence 8888889999999 7999999999999999999999999999999999999999999999997543 34444443322
Q ss_pred HhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCc
Q psy5653 449 TAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHC 528 (740)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 528 (740)
..+..|||+.. .++.+.|+++|.+++++|++++|.+.|++++|+||++.+++.++++++++.++..+......... .
T Consensus 662 ~~~~~~py~~~-~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~~~~~~~~--~ 738 (961)
T PRK15101 662 QMLSQVPYFER-DERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTEWWRGKDV--V 738 (961)
T ss_pred HHHhcCCCCCH-HHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcccccccce--E
Confidence 34568898764 56889999999999999999999999999999999999999999999888886532210000000 0
Q ss_pred ccCCCee-EEeCCCCCceeEEEEeecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeEEEEeecc
Q psy5653 529 RYTGSDV-RVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAHSFQSFNT 606 (740)
Q Consensus 529 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~~ 606 (740)
...+... ....+...++.+.+++...+. +.....+++.+|| ++ +++|||++|||+ |+||+|+++..
T Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~v~~~lLg-------~~--~ssrlf~~LRtk~qLgY~V~s~~~ 806 (961)
T PRK15101 739 VDKKQSVNFEKAGSSTDSALAAVYVPTGY---DEYQSSAYSSLLG-------QI--IQPWFYNQLRTEEQLGYAVFAFPM 806 (961)
T ss_pred eCCCCeEEEecCCCCCCCeEEEEEEeCCC---CCHHHHHHHHHHH-------HH--HhHHHHHHHHHHhhhceEEEEEee
Confidence 0011111 222223334445555532222 2367778888886 33 489999999996 99999999988
Q ss_pred cCCCCceEEEEEEeCC---CCHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCC
Q psy5653 607 CYKDTGLWGVYFVADR---MQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRR 683 (740)
Q Consensus 607 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
...+.+.+.+.++++. +.+...++.|++.+....+++|++||+++|+++++.+....+++...+.++|..+..++..
T Consensus 807 ~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~~lt~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~ 886 (961)
T PRK15101 807 SVGRQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLRAMKPEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMR 886 (961)
T ss_pred ccCCeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCC
Confidence 8777788888888764 4455566666655432235899999999999999999999999999999999988755555
Q ss_pred CC-hHHHHHHHcccCHHHHHHHHHHh-ccCCCcE--EEEEcCC
Q psy5653 684 VP-LHELEARIDDVTAKDIHEVCTKY-IWDRCPV--VAAVGPT 722 (740)
Q Consensus 684 ~~-~~~~~~~i~~vT~edv~~~~~~~-l~~~~~~--~~v~g~~ 722 (740)
++ .+++.+.|++||++||++++++| +.++... +.+.|..
T Consensus 887 fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~~~~~~~~~~ 929 (961)
T PRK15101 887 FDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLAILSQISGSQ 929 (961)
T ss_pred cChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCEEEEEeeccC
Confidence 55 58899999999999999999998 6655533 3444443
No 2
>KOG0959|consensus
Probab=100.00 E-value=8.3e-51 Score=440.41 Aligned_cols=690 Identities=14% Similarity=0.095 Sum_probs=462.7
Q ss_pred ccCCCCCCcEEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCC------ccCC-CC
Q psy5653 14 EKSVNVPSTQVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRG------QIKP-EY 85 (740)
Q Consensus 14 ~~~~~~~~~~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~------~~~~-~~ 85 (740)
+++.+.+.|++.+|+|||+|+ +.|+...++++++.|++||++||++.+|+|||||||+|+||++|| ++.. .|
T Consensus 20 k~~~d~r~yr~~~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~g 99 (974)
T KOG0959|consen 20 KSLGDTREYRGIELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNG 99 (974)
T ss_pred cCCCCccceeEEEecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcC
Confidence 466788999999999999999 999999999999999999999999999999999999999999887 3444 59
Q ss_pred cchhhhhhhhhhhcccCh-----------------------hHHHHhhhhHHHHHHHHH-----------HHHHH-hhcC
Q psy5653 86 GPLLVELSEEQVYMHIKP-----------------------NEVRQRKKQRKIDNEVAD-----------LKLKL-AACT 130 (740)
Q Consensus 86 ~~~~~~~~~~~~~~~f~~-----------------------~~~~~~~~~~~i~~e~~~-----------~~~~~-~~~~ 130 (740)
|..||.|..|.|+|+|++ ++++||+. +|++|.+. +.+.+ .+.|
T Consensus 100 GssNA~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~--AVdSE~~~nl~~D~wr~~ql~~~l~~~~h 177 (974)
T KOG0959|consen 100 GSSNAYTDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVG--AVDSEHEKNLNSDGWRFDQLLRSLSNPGH 177 (974)
T ss_pred CccccccccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHH--HHHHHHHhccCcchhHHHHHHHHhcCCCC
Confidence 999999999999888877 77888888 99999544 33333 2244
Q ss_pred CCCccccccHHHHHHhh-----HhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCcccccccccccC-
Q psy5653 131 QNGRNIVLSNREIRLLR-----YLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEGEMLSLDSVIS- 192 (740)
Q Consensus 131 ~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (740)
+++.=-.|....+.... +.++.+++.++|+...+ ...++...|+...+...+....-..++.
T Consensus 178 p~~kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~p~~~ 257 (974)
T KOG0959|consen 178 PYSKFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEPPFLP 257 (974)
T ss_pred cchhccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCCCCCh
Confidence 44433334444443332 66788888888886554 3456677787666532211100000000
Q ss_pred ------------------------------CCCCCC-----------------------CCCC-------ccCcccCCCC
Q psy5653 193 ------------------------------GRSTPS-----------------------DSGS-------CSGDIISPTE 212 (740)
Q Consensus 193 ------------------------------~~~~~~-----------------------~~~~-------~~~~~~~~~~ 212 (740)
.+..|. .... .....+...+
T Consensus 258 e~~~~~~~v~pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~~f~v 337 (974)
T KOG0959|consen 258 EELKKLVRVVPIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYSFFNV 337 (974)
T ss_pred HHhCcEEEEEeccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccceEEE
Confidence 000000 0000 0011111123
Q ss_pred CCCchhh-HHHHHHHhcc------------c--hh------------hhhhHHHHHHHHHhhcccccccCC---------
Q psy5653 213 PLSLTDS-MLLMDDILSD------------S--RL------------DQLDRIERIEAILTAENVAQIKPE--------- 256 (740)
Q Consensus 213 ~~~~~~~-~~~~~~il~~------------s--~l------------~~~~~~~~~~~~~~~~~~~~~~~~--------- 256 (740)
.+.+++. +..+.+|++- . +. ....++.........+...+..|.
T Consensus 338 ~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~l 417 (974)
T KOG0959|consen 338 SIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYL 417 (974)
T ss_pred EEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhh
Confidence 3334443 2222222220 0 00 001111111222222222222221
Q ss_pred --------ccchhhhhhccceeeeecCch--hHHhhh----hcccChhHHHHHHHHHHHhhhcc------------CChh
Q psy5653 257 --------YGPLLVELSEEQVYMHIKPNE--VRQRKK----QRKIDNEDMTFSVQHEWIRLCKT------------VTPA 310 (740)
Q Consensus 257 --------~~~~~~~l~~~~~~~~~~p~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------------~s~~ 310 (740)
...+++.|.+.+..+.+.... +..+.. ++.|.+++++.+++++|.+.... +|+.
T Consensus 418 l~~~~p~~i~~~~~~L~p~n~~v~~~s~~~~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~~~~l~lP~~nefI~t~f 497 (974)
T KOG0959|consen 418 LTEFDPDLIQEVLSSLVPSNMRVILVSRSFEGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHLNPELHLPTPNEFIPTDF 497 (974)
T ss_pred hhhcChHHHHHHHHhcCcccceeeeeeeccccccccccceeccccccccCCHHHHHHhhccCccccccCCCCCccccccc
Confidence 011112233332222222221 211111 56899999999999999654321 1222
Q ss_pred HHHHHh-hhccceEEEeccCCCCceecc----------cceec-ccC-Ccc-chhhHHHhhccCCCCChhHHHHHHHHhc
Q psy5653 311 EVERAK-NLLKSNLFLQLDGTTPVCEDI----------GRQIL-CYG-RRV-PLHELEARIDGTSKRSQTDLELEVENIG 376 (740)
Q Consensus 311 el~~~k-~~l~~~~~~~~d~~~~~~~~i----------g~~~~-~~~-~~~-~~~~l~~~~~gt~~~~~~~l~~~l~~~g 376 (740)
++...+ ..+..+.++..++...+|... ....+ .++ ... ....+..++.-.......+..+.+..+|
T Consensus 498 ~~~~~~~~~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aG 577 (974)
T KOG0959|consen 498 SILPAPIPKLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAG 577 (974)
T ss_pred ccccccCccccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 222211 112223334444444443211 00000 000 111 1122222333333344566788888899
Q ss_pred CeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHhcCCCC
Q psy5653 377 AHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQE-VETNLQEVVFDHLHATAFQGTP 455 (740)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~ 455 (740)
..++.+.+..+..+++.|++++++.+++.+.+.+.+...++++|+..++.+.+++++ ...+|+.++.+.+...+-...
T Consensus 578 l~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~- 656 (974)
T KOG0959|consen 578 LTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESI- 656 (974)
T ss_pred ceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccc-
Confidence 999999999999999999999999999999999999999999999999999999976 788999999888777766543
Q ss_pred CCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCC-----CCCccc
Q psy5653 456 LGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVP-----PAHCRY 530 (740)
Q Consensus 456 ~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~-----~~~~~~ 530 (740)
|+.....+.++.++++++..|...++.+..++++|+||++.+++.++++.....+........+... ......
T Consensus 657 --W~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~l 734 (974)
T KOG0959|consen 657 --WSKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQL 734 (974)
T ss_pred --cchHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceec
Confidence 6666678899999999999999999999999999999999999999888777766222111111110 000001
Q ss_pred -CCCee--EEe-CCCCCceeEEEEeecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeEEEEeec
Q psy5653 531 -TGSDV--RVR-DDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAHSFQSFN 605 (740)
Q Consensus 531 -~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~ 605 (740)
.+... ... +....++++..+++....+..+...+.++.+++ .+|+|+.||++ ++||.|++..
T Consensus 735 p~G~~~~~~~~~n~~~~ns~i~~~~Q~~~~~~~~~~~~~L~~~li-------------~ep~Fd~LRTkeqLGYiv~~~~ 801 (974)
T KOG0959|consen 735 PNGDYYFYRHLLNKTDDNSCIEVYYQIGVQDTRDNAVLGLLEQLI-------------KEPAFDQLRTKEQLGYIVSTGV 801 (974)
T ss_pred cCCceEEEEcccccCCCCceEEEEEEcccchhHHHHHHHHHHHHh-------------ccchHHhhhhHHhhCeEeeeee
Confidence 11111 111 344568899999998666678889999999999 68999999997 9999999998
Q ss_pred ccCCCCceEEEEEEeC--CCCHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCC
Q psy5653 606 TCYKDTGLWGVYFVAD--RMQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRR 683 (740)
Q Consensus 606 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
....+...+.+.+|++ +.+++..++.+++.+++....+++++|+..+.+++....++..+......++|..+..+.+.
T Consensus 802 r~~~G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~ 881 (974)
T KOG0959|consen 802 RLNYGTVGLQITVQSEKSVDYLEERIESFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYN 881 (974)
T ss_pred eeecCcceeEEEEccCCCchHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhc
Confidence 8888888999999865 66888888888888887777899999999999999999999999999999999999988887
Q ss_pred CCh-HHHHHHHcccCHHHHHHHHHHhccC-----CCcEEEEEcC
Q psy5653 684 VPL-HELEARIDDVTAKDIHEVCTKYIWD-----RCPVVAAVGP 721 (740)
Q Consensus 684 ~~~-~~~~~~i~~vT~edv~~~~~~~l~~-----~~~~~~v~g~ 721 (740)
+++ ++.++.++++|++++..++..++.. ....+.+.|+
T Consensus 882 f~r~~~~v~~l~~i~k~~~i~~f~~~~~~~a~~~~~lsv~~~~~ 925 (974)
T KOG0959|consen 882 FDRDEKEVEALKKITKEDVINFFDEYIRKGAAKRKKLSVHVHGK 925 (974)
T ss_pred chhhHHHHHHHHhhhHHHHHHHHHhhccccchhcceEEEEecCc
Confidence 776 7788999999999999999999863 2344445554
No 3
>KOG0960|consensus
Probab=100.00 E-value=3.4e-49 Score=373.17 Aligned_cols=408 Identities=61% Similarity=0.969 Sum_probs=384.5
Q ss_pred CceecccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHH
Q psy5653 332 PVCEDIGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADII 410 (740)
Q Consensus 332 ~~~~~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l 410 (740)
.+|-+.|+..+.....+-.|+++| .|+||++.+...+..+++..|+.+|++++++.+.|..+++++++++++++|.|++
T Consensus 58 GVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytSReqT~yyakal~~dv~kavdiLaDIl 137 (467)
T KOG0960|consen 58 GVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTSREQTVYYAKALSKDVPKAVDILADIL 137 (467)
T ss_pred EEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhcccccccceeeehhhccccchHHHHHHHHHH
Confidence 344577999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEE
Q psy5653 411 QNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVL 490 (740)
Q Consensus 411 ~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~ 490 (740)
.+..+.+..++++|..+++|++....+...+.++.++...|.++|.++.+.|+.+.|++|+.+||++|.+.+|.+.+|++
T Consensus 138 qns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI~si~r~DL~~yi~thY~~~RmVl 217 (467)
T KOG0960|consen 138 QNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENIKSISRADLKDYINTHYKASRMVL 217 (467)
T ss_pred HhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhhhhhhHHHHHHHHHhcccCccEEE
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEeCCCCCceeEEEEeecCCCCCCChHHHHHHHHh
Q psy5653 491 SGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVRDDAMPLAHVALAVEGCGWESADNIPLMVANTL 570 (740)
Q Consensus 491 ~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~i 570 (740)
.-+|.++.|++.++++++|+.++..+.+..+...+ ++.+.+..+++.+++.+..++.+++.+++++++|+.+++|.++|
T Consensus 218 aaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~-~~~FtgsEvR~rdd~lP~a~~AiAVEG~~w~~pD~~~l~van~i 296 (467)
T KOG0960|consen 218 AAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVP-PARFTGSEVRVRDDDLPLAHIAIAVEGVSWAHPDYFALMVANTI 296 (467)
T ss_pred EecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCC-CccccCceeeecCCCCchhheeeeEecCCcCCccHHHHHHHHHH
Confidence 99999999999999999999988654443332222 25688999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccCCCCceEEEEEEe-CCCCHHHHHHHHHHHHHHhhcCCCHHHHH
Q psy5653 571 IGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCYKDTGLWGVYFVA-DRMQLEDMTFSVQHEWIRLCKTVTPAEVE 649 (740)
Q Consensus 571 L~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~s~~el~ 649 (740)
+|.|....|+|.+..++|-+.+-..+++-++.++..++.+.|.+++|+.+ ++..+++.+..++.+..+|...+|+.|++
T Consensus 297 iG~wdr~~g~g~~~~s~La~~~~~~~l~~sfqsFnt~YkDTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~~vteaEV~ 376 (467)
T KOG0960|consen 297 IGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQSFNTSYKDTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLATSVTEAEVE 376 (467)
T ss_pred hhhhhcccCCccCCccHHHHHHHHHHHHHHHhhhhcccccccceeEEEEecChhhHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 99999999999999999999888889999988999999999999999999 78899999999999999998889999999
Q ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhccCCCcEEEEEcCCCCCCCHH
Q psy5653 650 RAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRCPVVAAVGPTEQLPDYT 729 (740)
Q Consensus 650 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~~~~~~~~v~g~~~~i~~~~ 729 (740)
++|+.+...+...++.....++.+++..+.+|......+...+|++||.++|++++.+|+..+.+.++.+||.+.+||+.
T Consensus 377 RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Grri~l~El~~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie~lpdy~ 456 (467)
T KOG0960|consen 377 RAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGRRIPLAELEARIDAVTAKDVREVASKYIYDKDIAIAAVGPIEGLPDYN 456 (467)
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCCcCChHHHHHHHhhccHHHHHHHHHHHhhcCCcceeeecccccCchHH
Confidence 99999999999999999899999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcC
Q psy5653 730 WLRQSMYWIRF 740 (740)
Q Consensus 730 ~~~~~~~~~~~ 740 (740)
.+++.|.|+||
T Consensus 457 ~irs~m~w~R~ 467 (467)
T KOG0960|consen 457 RIRSGMSWMRW 467 (467)
T ss_pred HHhccchhhcC
Confidence 99999999997
No 4
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.4e-48 Score=409.16 Aligned_cols=687 Identities=11% Similarity=0.090 Sum_probs=436.0
Q ss_pred ccCCCCCCcEEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc-------CCCC
Q psy5653 14 EKSVNVPSTQVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI-------KPEY 85 (740)
Q Consensus 14 ~~~~~~~~~~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~-------~~~~ 85 (740)
++..+.++|+..+|||||+++ ++||+.++++++|.|++||.+||.+.+|+|||||||+|+||++||+- ...|
T Consensus 16 ~~~~d~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhg 95 (937)
T COG1025 16 KPALDDRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHG 95 (937)
T ss_pred cCcccCcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcC
Confidence 366899999999999999999 99999999999999999999999999999999999999999988763 2259
Q ss_pred cchhhhhhhhhhhcccCh-----------------------hHHHHhhhhHHHHHHHHH--------HHHHHhhcCCCCc
Q psy5653 86 GPLLVELSEEQVYMHIKP-----------------------NEVRQRKKQRKIDNEVAD--------LKLKLAACTQNGR 134 (740)
Q Consensus 86 ~~~~~~~~~~~~~~~f~~-----------------------~~~~~~~~~~~i~~e~~~--------~~~~~~~~~~~~~ 134 (740)
|..||+|..+.|+|+|++ +.++||+. +|++|... +++...-..+.++
T Consensus 96 Gs~NA~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~--AV~sE~~~~~~~D~~R~~~~~~~~~np~H 173 (937)
T COG1025 96 GSHNASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERN--AVNSEFTMNLTSDGWRMYQVQALTANPGH 173 (937)
T ss_pred CccccccCCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHH--HHHHHHhcCcCchHHHHHHHHHhhcCCCC
Confidence 999999999999877776 78899999 99999555 2332222233333
Q ss_pred ccc----ccHHHHHH----hhHhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCcc--ccc---cccc
Q psy5653 135 NIV----LSNREIRL----LRYLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEG--EML---SLDS 189 (740)
Q Consensus 135 ~~~----~~~~~~~~----~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~---~~~~ 189 (740)
+.+ |....+.. ...+++.+++..+|.+..+ ..++..+.|++.+..... ... ..+.
T Consensus 174 P~srFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~ 253 (937)
T COG1025 174 PLSKFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDE 253 (937)
T ss_pred CccccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChH
Confidence 222 22222222 2355677777777774332 577778899988742110 000 0000
Q ss_pred -------------------cc--C-----C--CC-----------CCC---------------CCCC--ccCcccCCCCC
Q psy5653 190 -------------------VI--S-----G--RS-----------TPS---------------DSGS--CSGDIISPTEP 213 (740)
Q Consensus 190 -------------------~~--~-----~--~~-----------~~~---------------~~~~--~~~~~~~~~~~ 213 (740)
.| . . ++ .++ .... .....+...+.
T Consensus 254 ~t~~ii~i~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~~~n~~~f~is 333 (937)
T COG1025 254 QTGKIIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPISGNYGVFAIS 333 (937)
T ss_pred HhCceEEeccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccccCCcceEEEE
Confidence 00 0 0 00 000 0000 00000001122
Q ss_pred CCchhh-HHHHHHHhc----cch------hhhhhHHHHHHHHHh-----------------hcccccccC----------
Q psy5653 214 LSLTDS-MLLMDDILS----DSR------LDQLDRIERIEAILT-----------------AENVAQIKP---------- 255 (740)
Q Consensus 214 ~~~~~~-~~~~~~il~----~s~------l~~~~~~~~~~~~~~-----------------~~~~~~~~~---------- 255 (740)
..+++. +...+.|+. -.+ +.... -+.+..++. .+......|
T Consensus 334 ~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~-f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~ 412 (937)
T COG1025 334 YELTDKGLAHYDRVIALTFQYLNLLREKGIPKYT-FDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLV 412 (937)
T ss_pred eehhhcchhhHHHHHHHHHHHHHHHHhccchhhH-HHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhc
Confidence 233333 111111111 000 00000 000000000 000000001
Q ss_pred -------CccchhhhhhccceeeeecCchhHHhh----hhcccChhHHHHHHHHHHHhhhccC------------ChhHH
Q psy5653 256 -------EYGPLLVELSEEQVYMHIKPNEVRQRK----KQRKIDNEDMTFSVQHEWIRLCKTV------------TPAEV 312 (740)
Q Consensus 256 -------~~~~~~~~l~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~------------s~~el 312 (740)
....++..+.+++..+.+........+ ...+|.++++..+....|.+....+ ++..+
T Consensus 413 ~~~yd~~~~~~~l~~~~pen~R~~lis~~~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~~~~~l~lP~~N~fIp~~~~~ 492 (937)
T COG1025 413 LPRYDPKAIQERLALMTPENARLWLISKLEEHDKAAYFYGFPYQVDDYTAQPLDAWQQKADSIELSLPEPNPFIPDDVSL 492 (937)
T ss_pred ccccCHHHHHHHHHhhCccceEEEEecCCCCccccceeecCcceecchhhhhhhhhhcccccccccCCCCCCCCCccccc
Confidence 111112222222333332222211112 2558899999999888888755422 22222
Q ss_pred HHHhhhccceEEEeccCCCCceecc-----------cceecccC--CccchhhHHH-hhccCCCCChhHHHHHHHHhcCe
Q psy5653 313 ERAKNLLKSNLFLQLDGTTPVCEDI-----------GRQILCYG--RRVPLHELEA-RIDGTSKRSQTDLELEVENIGAH 378 (740)
Q Consensus 313 ~~~k~~l~~~~~~~~d~~~~~~~~i-----------g~~~~~~~--~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g~~ 378 (740)
.+......-+.++..+++..+|... ....+... ...+.+.+.. +..-..+....++.+.+...|.+
T Consensus 493 ~~~~~~~~~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~la~dal~~~~y~A~~aG~s 572 (937)
T COG1025 493 IKSEKKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDALDKLSYQASLAGLS 572 (937)
T ss_pred cccccCCCCchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHHHHHHHHhhhhHHHhcceE
Confidence 1111111112222233333333210 11111111 1111112211 22222233344566667778999
Q ss_pred eeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHhcCCCCCC
Q psy5653 379 LNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQE-VETNLQEVVFDHLHATAFQGTPLG 457 (740)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~ 457 (740)
++...+.+++.++++|+++.++.++..+.+.+....++++.|+..|+.+.++++. ....|++++...+...+-+.+
T Consensus 573 fs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~~~~--- 649 (937)
T COG1025 573 FSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPY--- 649 (937)
T ss_pred EEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhhhhCCCC---
Confidence 9999999999999999999999999999999999999999999999999999964 567799999888887776544
Q ss_pred CCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCC--CCCCCCCCcccCCCee
Q psy5653 458 NTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDC--AGVVPPAHCRYTGSDV 535 (740)
Q Consensus 458 ~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~ 535 (740)
++.....+.++.++.+++..|...++++.+...+|.||++.+++.++.+.....++...... .+.... ...+...
T Consensus 650 ~s~~e~~~~l~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~~~s~~~~~~~~~~---~~~~~~~ 726 (937)
T COG1025 650 WSREERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPAIGSTWYRNPSVYL---LKGGTRI 726 (937)
T ss_pred cCHHHHHHHhhhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhcccCCcccCCCceec---cCCCeeE
Confidence 56666788999999999999999999999999999999999999999887766665433211 111111 1112222
Q ss_pred EEeCCCCCceeEEEEeecCCCC-CCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeEEEEeecccCCCCce
Q psy5653 536 RVRDDAMPLAHVALAVEGCGWE-SADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAHSFQSFNTCYKDTGL 613 (740)
Q Consensus 536 ~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~~~~~~~~~ 613 (740)
.....+...+...+.+....++ .++.+.-.++.+++ ...+|++||++ |+||.|++++.......+
T Consensus 727 ~e~~~~~~~~an~~i~~~~~~~~~~~~a~s~Ll~~l~-------------~~~ff~~LRTkeQLGY~Vfs~~~~v~~~~g 793 (937)
T COG1025 727 FETVGGESDSANAAILYPQQYDEIKSSALSSLLGQLI-------------HPWFFDQLRTKEQLGYAVFSGPREVGRTPG 793 (937)
T ss_pred eeeccCCcccccceeEeccccchHHHHHHHHHHHHHH-------------hHHhHHHhhhhhhcceEEEecceeecCccc
Confidence 2111122222223333323333 45556667899999 68999999997 999999999999888888
Q ss_pred EEEEEEeC---CCCHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCC-hHHH
Q psy5653 614 WGVYFVAD---RMQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVP-LHEL 689 (740)
Q Consensus 614 ~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 689 (740)
+.|+++++ |..+.+.+++|.+.++....+|++++|++.|+++++++.++..++..++.++|..+..+...++ .++.
T Consensus 794 i~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~~ms~e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~~~g~~~Fd~~ek~ 873 (937)
T COG1025 794 IGFLVQSNSKSPSYLLERINAFLETAEPELREMSEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFDHREKK 873 (937)
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHhccCCCCcCcHHHH
Confidence 99999987 4466777777777666655689999999999999999999999999999999966555544444 5888
Q ss_pred HHHHcccCHHHHHHHHHHhccC---CCcEEEEEcCC
Q psy5653 690 EARIDDVTAKDIHEVCTKYIWD---RCPVVAAVGPT 722 (740)
Q Consensus 690 ~~~i~~vT~edv~~~~~~~l~~---~~~~~~v~g~~ 722 (740)
+++++.+|.+++..++.+.+.. .+..+.+.|+.
T Consensus 874 i~~vk~LT~~~l~~f~~~~l~~~~g~~l~~~i~g~~ 909 (937)
T COG1025 874 IEAVKTLTKQKLLDFFENALSYEQGSKLLSHIRGQN 909 (937)
T ss_pred HHHHHhcCHHHHHHHHHHhhcccccceeeeeeeccc
Confidence 9999999999999999988863 34556777743
No 5
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=3e-41 Score=361.16 Aligned_cols=394 Identities=31% Similarity=0.470 Sum_probs=339.9
Q ss_pred EEEeccCCCCce-----ecccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecC
Q psy5653 323 LFLQLDGTTPVC-----EDIGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLK 396 (740)
Q Consensus 323 ~~~~~d~~~~~~-----~~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 396 (740)
++..+.+..+.+ -..|+..+..+..|.+|.++| +|.||.+++..++...++..|+.+|++|+.+.|.|.+++.+
T Consensus 28 ~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~ts~d~t~y~~~~l~ 107 (438)
T COG0612 28 VITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFTSFDYTVYYLSVLP 107 (438)
T ss_pred EEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeeccccchhhhhhhhhch
Confidence 344455544444 356899999999999999999 89999999999999999999999999999999999999889
Q ss_pred CChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHH
Q psy5653 397 QDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLL 476 (740)
Q Consensus 397 ~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~ 476 (740)
++++.+|+++.+++.+|.|++++|+++|..++++++...++|...+...+...+|++|||++++.|+.+.|+++|.++|+
T Consensus 108 ~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~it~~dl~ 187 (438)
T COG0612 108 DNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAITREDLK 187 (438)
T ss_pred hhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEe---CCCCCceeEEEEeec
Q psy5653 477 DYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVR---DDAMPLAHVALAVEG 553 (740)
Q Consensus 477 ~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 553 (740)
+||++||+|+||+++|+||++.+++.++++++|+.|+....+......+ .........+. .+...++++.++++.
T Consensus 188 ~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 265 (438)
T COG0612 188 DFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPPKIPPEP--PLGPERVVRVNDPEQPDLEQAWLALGYPG 265 (438)
T ss_pred HHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCCCCCCcc--ccCCCceEEecCCCCchhhhhhhhccccC
Confidence 9999999999999999999999999999999999999722111111111 12222333332 234557788888888
Q ss_pred CCCCCC-ChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHH
Q psy5653 554 CGWESA-DNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFS 631 (740)
Q Consensus 554 ~~~~~~-~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (740)
+....+ +++++.+++.+||| | ++|+||+.+|++ |++|+++++.......+.+.+++.+.+.+.+.+.+.
T Consensus 266 ~~~~~~~~~~~~~l~~~llgg-------~--~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (438)
T COG0612 266 PDYDSPDDYAALLLLNGLLGG-------G--FSSRLFQELREKRGLAYSVSSFSDFLSDSGLFSIYAGTAPENPEKTAEL 336 (438)
T ss_pred cCcCcchhhHHHHHHHHHhCC-------C--cchHHHHHHHHhcCceeeeccccccccccCCceEEEEecCCChhhHHHH
Confidence 777665 78888999999973 3 489999999996 999999987777777899999999988888888888
Q ss_pred HHHHHHHhhcC----CCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHH
Q psy5653 632 VQHEWIRLCKT----VTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTK 707 (740)
Q Consensus 632 ~~~~~~~l~~~----~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~ 707 (740)
+.+.+..+.+. +++++++.+|..+.+.+....+++...++.+......++.....+++.+.|++||++||.+++++
T Consensus 337 i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~ 416 (438)
T COG0612 337 VEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGGSLITLEELLERIEAVTLEDVNAVAKK 416 (438)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcCCccCHHHHHHHHHhcCHHHHHHHHHH
Confidence 88888777653 99999999999999999999999999999887765555677788999999999999999999999
Q ss_pred hccCCCcEEEEEcCCCCCCC
Q psy5653 708 YIWDRCPVVAAVGPTEQLPD 727 (740)
Q Consensus 708 ~l~~~~~~~~v~g~~~~i~~ 727 (740)
++.+++..++++||....++
T Consensus 417 ~~~~~~~~~~~~~p~~~~~~ 436 (438)
T COG0612 417 LLAPENLTIVVLGPEKALKD 436 (438)
T ss_pred hcCCCCcEEEEEcccccccc
Confidence 99998899999999876554
No 6
>KOG2067|consensus
Probab=100.00 E-value=9.3e-38 Score=296.21 Aligned_cols=395 Identities=32% Similarity=0.516 Sum_probs=354.9
Q ss_pred cccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCC
Q psy5653 336 DIGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSK 414 (740)
Q Consensus 336 ~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~ 414 (740)
+-|+.++.....+..|.++. .|+.|.+++..++...++..|+.+.+.++++.+.|..++.++.++.++++|.|.+.+|.
T Consensus 53 dsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsSRetm~Yaas~~~~~v~sm~~lLadtV~~P~ 132 (472)
T KOG2067|consen 53 DSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSSRETMMYAASADSDGVDSMVELLADTVLNPK 132 (472)
T ss_pred ecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCcccccccHhhhHHHHHhhhcccHHHHHHHHHHHhccc
Confidence 55888888888899999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEc
Q psy5653 415 LGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAG 494 (740)
Q Consensus 415 ~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G 494 (740)
|++++++.+|..+.-|+.....+|+-+..++++.+.|.+.+.+.+.....+.+.+|+.+.|..|.+.+|.|.+|++.-+|
T Consensus 133 ~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vG 212 (472)
T KOG2067|consen 133 FTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEENIDKINREVLEEYLKYFYTPERMVLAGVG 212 (472)
T ss_pred ccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhhhhhhhHHHHHHHHHhcCChhheEeeecC
Confidence 99999999999999999988999999999999999999888999999899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEe------CCCCCceeEEEEeecCCCCCCChHHHHHHH
Q psy5653 495 GVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVR------DDAMPLAHVALAVEGCGWESADNIPLMVAN 568 (740)
Q Consensus 495 ~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~ 568 (740)
++.|++.+.++++++.||....++... . +....+....+. .-..+-+++.++|.+++++++|.+++.+|+
T Consensus 213 -V~heelv~~~~~~~~~~~s~~~p~i~~-~--~aQYtGG~~~~~~d~~~~~~g~EltHv~lg~Eg~~~~deD~v~~avLq 288 (472)
T KOG2067|consen 213 -VEHEELVEIAEKLLGDLPSTKVPPIDE-S--KAQYTGGELKIDTDAPQVTGGPELTHVVLGFEGCSWNDEDFVALAVLQ 288 (472)
T ss_pred -CCHHHHHHHHHHHhccCCccCCCCccc-c--hhhccccccccCCCCccccCccceeeeeEeeccCCCCChhHHHHHHHH
Confidence 999999999999999999864333211 1 134444432221 111257899999999999999999999999
Q ss_pred HhhcCC--CCCCCCCCCcccHHHHHHHhc-CCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhcCCCH
Q psy5653 569 TLIGAW--DRSQGSGTNNASRLAAITAEQ-GFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCKTVTP 645 (740)
Q Consensus 569 ~iL~~~--~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~ 645 (740)
.+|||. .+.+|.|++|.||||..+-.+ .+.|++.++...+.+.|.|.++..++|+.+.++++.+.+++-.+..++++
T Consensus 289 ~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~~v~~ 368 (472)
T KOG2067|consen 289 MLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFGIYASAPPQAANDAVELIAKEMINMAGGVTQ 368 (472)
T ss_pred HHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeEEeccCCHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 999984 477778889999999888876 99999999999999999999999999999999999999999988888999
Q ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhccCCCcEEEEEcCCCCC
Q psy5653 646 AEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRCPVVAAVGPTEQL 725 (740)
Q Consensus 646 ~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~~~~~~~~v~g~~~~i 725 (740)
+|+++||.++...+....++-.-..+.+.+.++.++.....+++++.|+++|++||.+++++.|. +++++.-.|+-..+
T Consensus 369 ~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g~rk~p~e~~~~Ie~lt~~DI~rva~kvlt-~~p~va~~Gd~~~l 447 (472)
T KOG2067|consen 369 EELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTGERKPPDEFIKKIEQLTPSDISRVASKVLT-GKPSVAAFGDGTGL 447 (472)
T ss_pred HHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhccCcCCHHHHHHHHHhcCHHHHHHHHHHHhc-CCceeccCCcccCC
Confidence 99999999999999999999888889999999888888888999999999999999999999996 56889999999999
Q ss_pred CCHHHHHHHH
Q psy5653 726 PDYTWLRQSM 735 (740)
Q Consensus 726 ~~~~~~~~~~ 735 (740)
|++..+-+..
T Consensus 448 pt~~~i~~~~ 457 (472)
T KOG2067|consen 448 PTYDHIGNAV 457 (472)
T ss_pred cchhhhhhhc
Confidence 9998765543
No 7
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=3e-34 Score=331.66 Aligned_cols=351 Identities=14% Similarity=0.044 Sum_probs=245.0
Q ss_pred cCCCCChhHHHHHHHHhcCeeeEE----ec------------ceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHH-HH
Q psy5653 359 GTSKRSQTDLELEVENIGAHLNAY----TS------------REQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAE-IE 421 (740)
Q Consensus 359 gt~~~~~~~l~~~l~~~g~~~~~~----~~------------~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~-~~ 421 (740)
||.++++.++...+...-+++++. +. ...+.++++++.++++.+++++.+++.++.|++.+ +.
T Consensus 712 gT~~~s~~el~~~i~~~tGg~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~ 791 (1119)
T PTZ00432 712 GTDKLSSEEFTYKREKNLGGLSASTAFYSETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGV 791 (1119)
T ss_pred CCCCCCHHHHHHHHHHhCCCeEEEEEEeccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 999999999999999985444432 22 23689999999999999999999999999998743 44
Q ss_pred HHHHHHHHHHHHh-hCCHHHHHHHHHHHHhcCCCCCCCCCCC--ChhhhccC-----------CHHHHHHHHHhhccCCc
Q psy5653 422 RERGVILREMQEV-ETNLQEVVFDHLHATAFQGTPLGNTILG--PTQNIKSL-----------QRQDLLDYVNAFYQPAR 487 (740)
Q Consensus 422 ~~k~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~i-----------t~e~l~~~~~~~~~~~~ 487 (740)
.+....+..+... ..+....+...+...+-...-+.....| ...-|+.+ -.+.|...+++++.++|
T Consensus 792 ~il~~~~~~~~~~~~~~Gh~~A~~~~~s~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~ 871 (1119)
T PTZ00432 792 EILKRKINGMKTVFSSKGHKFALKRMKSKFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKN 871 (1119)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCC
Confidence 4444444444322 2233333332222111000000001111 11222221 13457888999999999
Q ss_pred eEEEEEcCCC-HHHHHHHHHHhhCCCCCC----C--CCCCCCCCCC-----CcccCCCeeEEeCCCCCceeEEEEeecCC
Q psy5653 488 MVLSGAGGVD-HDTLVKLAKEHFGNVKPP----N--VDCAGVVPPA-----HCRYTGSDVRVRDDAMPLAHVALAVEGCG 555 (740)
Q Consensus 488 ~~~~i~G~~~-~~~~~~~v~~~~~~l~~~----~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 555 (740)
+.+.|+|+.+ .+.+.+.+..++..++.. . ....+..... ..........+. +..++++..+.+...
T Consensus 872 l~~~vt~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--p~~V~yv~~~~~~~~ 949 (1119)
T PTZ00432 872 LTVNVTGDSELLDSLLDDSTTFLKKLSSTFKENDNKSSDKVWVKEVLDKKLMESVDKNEFIVL--PTRVNFVGMGGKLFD 949 (1119)
T ss_pred cEEEEEeCHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccCCcccceEEEc--cCceeEEEEeccccc
Confidence 9999999874 556666666677766421 1 1111110000 001112233332 346778888765555
Q ss_pred CCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHHHHHH
Q psy5653 556 WESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHE 635 (740)
Q Consensus 556 ~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (740)
.++++.+++.|+.++|+ +++||+.||++|+|||+++.... .|.|.++.+.+| ++.++++.+.+.
T Consensus 950 ~~~~~~~~l~Vl~~~L~------------~~yLw~~IR~~GGAYG~~~~~~~---~G~~~f~SYRDP-n~~~Tl~~f~~~ 1013 (1119)
T PTZ00432 950 KSDKVDGSFQVIVHYLK------------NSYLWKTVRMSLGAYGVFADLLY---TGHVIFMSYADP-NFEKTLEVYKEV 1013 (1119)
T ss_pred CCCccCHHHHHHHHHHc------------cccchHHHcccCCccccCCccCC---CCeEEEEEecCC-CHHHHHHHHHHH
Confidence 66788999999999997 79999999999999999866643 589999999999 999999999999
Q ss_pred HHHhhc---CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhcc-C
Q psy5653 636 WIRLCK---TVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIW-D 711 (740)
Q Consensus 636 ~~~l~~---~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~-~ 711 (740)
.+.+.+ .+|+++++++|.+.+..+..+. +|..........++.+...+.+++++++|.++|++||+++|+.+.. .
T Consensus 1014 ~~~l~~~~~~~~~~~l~~~iig~~~~~D~p~-~p~~~g~~~~~~~l~g~t~e~rq~~R~~il~~t~edi~~~a~~~~~~~ 1092 (1119)
T PTZ00432 1014 ASALREAAETLTDKDLLRYKIGKISNIDKPL-HVDELSKLALLRIIRNESDEDRQKFRKDILETTKEDFYRLADLMEKSK 1092 (1119)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhccCCCC-ChHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 998865 4999999999999999988876 6666666665666666666778999999999999999999999987 3
Q ss_pred CCcEEEEEcCCCCCCCH
Q psy5653 712 RCPVVAAVGPTEQLPDY 728 (740)
Q Consensus 712 ~~~~~~v~g~~~~i~~~ 728 (740)
+...+||+|+..++.+.
T Consensus 1093 ~~~~~~v~g~~~~~~~~ 1109 (1119)
T PTZ00432 1093 EWEKVIAVVNSKTSDTA 1109 (1119)
T ss_pred ccCeEEEEECHHHhhhc
Confidence 55789999998776554
No 8
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=4.3e-34 Score=309.20 Aligned_cols=318 Identities=18% Similarity=0.153 Sum_probs=266.0
Q ss_pred eEEEeccCCCCcee-----cccceecccCCccchhhHHH-hhccCCCCChh-HHHHHHHHhcCeeeEEecceEEEEEEEe
Q psy5653 322 NLFLQLDGTTPVCE-----DIGRQILCYGRRVPLHELEA-RIDGTSKRSQT-DLELEVENIGAHLNAYTSREQTVFYAKC 394 (740)
Q Consensus 322 ~~~~~~d~~~~~~~-----~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~-~l~~~l~~~g~~~~~~~~~~~~~~~~~~ 394 (740)
.+++..++..+.+. +.|+..++.+..|..|.++| +|+||++++.. ++...++..|+++|++|+.+.|.|++++
T Consensus 10 rVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d~T~y~~~v 89 (696)
T TIGR02110 10 RVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLERTTAFFFEL 89 (696)
T ss_pred EEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCCeEEEEEEe
Confidence 45666777766553 56888899999999999999 89999999985 7999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCC---
Q psy5653 395 LKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQ--- 471 (740)
Q Consensus 395 ~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it--- 471 (740)
++++++.+|+++.+++.+|.|++++++++|+++++|++...++|..++...+...+|++|||++...|+.++|++++
T Consensus 90 ~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL~~it~~t 169 (696)
T TIGR02110 90 PAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSLALPNTAF 169 (696)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHhCcccch
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999876
Q ss_pred HHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEeCCCCCceeEEEEe
Q psy5653 472 RQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVRDDAMPLAHVALAV 551 (740)
Q Consensus 472 ~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 551 (740)
.++|++||+++|.++||+++|+||++.++++++++++|+.|+.+..+.. ..++ .........+......+.++.+.+
T Consensus 170 ~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~-~~~~--p~~~~~~~~~~~~~~~q~~l~~~~ 246 (696)
T TIGR02110 170 QQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQ-APPA--PLLRFDRLTLAGGSEPRLWLLFAL 246 (696)
T ss_pred HHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCC-CCCC--CCCCCceeEEEecCcceEEEEEee
Confidence 9999999999999999999999999999999999999999986653321 1111 111222223332333455565555
Q ss_pred ecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccCCCCc--eEEEEEEe---CCCCHH
Q psy5653 552 EGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCYKDTG--LWGVYFVA---DRMQLE 626 (740)
Q Consensus 552 ~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~~~~~--~~~~~~~~---~~~~~~ 626 (740)
+..+. .+..++.+++.+|| +|+ +++|+.+||++|++|++++++ .+.+.+ .|.+++.+ .+++.+
T Consensus 247 p~~~~--~d~~al~lL~~iLg-------~g~--sSrL~~~LRe~GLaysV~s~~-~~~~~g~~lf~I~~~lt~~~~~~~~ 314 (696)
T TIGR02110 247 AGLPA--TARDNVTLLCEFLQ-------DEA--PGGLLAQLRERGLAESVAATW-LYQDAGQALLALEFSARCISAAAAQ 314 (696)
T ss_pred cCCCC--CChHHHHHHHHHhC-------CCc--chHHHHHHHHCCCEEEEEEec-cccCCCCcEEEEEEEEcCCCccCHH
Confidence 54444 44446899999998 444 899999999999999999865 344444 78888886 356899
Q ss_pred HHHHHHHHHHHHhh-c--CCCHHHHHHHHHH
Q psy5653 627 DMTFSVQHEWIRLC-K--TVTPAEVERAKNL 654 (740)
Q Consensus 627 ~~~~~~~~~~~~l~-~--~~s~~el~~~k~~ 654 (740)
++++.+.+++++++ + +++.+|++++|+.
T Consensus 315 ~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 315 QIEQLLTQWLGALAEQTWAEQLEHYAQLAQR 345 (696)
T ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Confidence 99999999999996 4 6899999999976
No 9
>PRK15101 protease3; Provisional
Probab=100.00 E-value=1e-33 Score=333.24 Aligned_cols=391 Identities=16% Similarity=0.139 Sum_probs=312.3
Q ss_pred eEEEeccCCCCcee-----cccceecccCCccchhhHHH-hhccCCCCC-hhHHHHHHHHhcCeeeEEecceEEEEEEEe
Q psy5653 322 NLFLQLDGTTPVCE-----DIGRQILCYGRRVPLHELEA-RIDGTSKRS-QTDLELEVENIGAHLNAYTSREQTVFYAKC 394 (740)
Q Consensus 322 ~~~~~~d~~~~~~~-----~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~-~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~ 394 (740)
.+++..++..+.+. ..|+..++.+..|.+|.++| +|.||.+++ ..++...++.+|+++|++|+.+.|.|.+++
T Consensus 54 ~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~~~~ 133 (961)
T PRK15101 54 TVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNASTASYRTAFYLEV 133 (961)
T ss_pred EEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccceECCCceEEEEEc
Confidence 45566666665543 56898888999999999999 899999997 578999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccC----
Q psy5653 395 LKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSL---- 470 (740)
Q Consensus 395 ~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---- 470 (740)
++++++.+|+++.+++.+|.|++++++++|+.+.+|++...++|..++...+...+|++|||++...|+.++|+.+
T Consensus 134 ~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G~~etl~~~~~~~ 213 (961)
T PRK15101 134 ENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGGNLETLSDKPGSK 213 (961)
T ss_pred CHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCCCHHHhhcCCchH
Confidence 9999999999999999999999999999999999999888889999999998889999999999999999999997
Q ss_pred CHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEeCCCCCceeEEEE
Q psy5653 471 QRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVRDDAMPLAHVALA 550 (740)
Q Consensus 471 t~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 550 (740)
+.++|++||++||.|+||+++|+|+++.+++.++++++|+.|+....+......+...+..........+..+++.+.++
T Consensus 214 ~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 293 (961)
T PRK15101 214 LQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVPVVTDAQKGIIIHYVPAQPRKVLRVE 293 (961)
T ss_pred HHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCHHHcCeEEEEEECCCCcEEEEE
Confidence 69999999999999999999999999999999999999999987653221111110011111222222334567788999
Q ss_pred eecCCCCCC-ChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccC--CCCceEEEEEEeCCC---C
Q psy5653 551 VEGCGWESA-DNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCY--KDTGLWGVYFVADRM---Q 624 (740)
Q Consensus 551 ~~~~~~~~~-~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~--~~~~~~~~~~~~~~~---~ 624 (740)
|+.+..... ......+++.+||+ +. .+.|+..|+.+|++|+++++.... .+.+.|.+++.+.++ +
T Consensus 294 ~~~p~~~~~~~~~~~~~l~~ll~~-------~~--~g~l~~~L~~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~ 364 (961)
T PRK15101 294 FRIDNNSAKFRSKTDEYISYLIGN-------RS--PGTLSDWLQKQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQ 364 (961)
T ss_pred EecCCcHHHHhhCHHHHHHHHhcC-------CC--CCcHHHHHHHcCccceeeeccccccCCCceEEEEEEEcChHHHHh
Confidence 988754322 23357789999974 22 567888888789999999876533 456889999887764 7
Q ss_pred HHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHh-ccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHH
Q psy5653 625 LEDMTFSVQHEWIRLCK-TVTPAEVERAKNLLKSNLFLQ-LDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIH 702 (740)
Q Consensus 625 ~~~~~~~~~~~~~~l~~-~~s~~el~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~ 702 (740)
.+++++.+.+.++.+++ |+++++|+++|+.+...+... ...+...+..+.... .+..+.........++.+++++|+
T Consensus 365 ~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~i~ 443 (961)
T PRK15101 365 RDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTM-LRVPVEHTLDAPYIADRYDPKAIK 443 (961)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHh-hhCCHHHheeCchhhhcCCHHHHH
Confidence 89999999999999975 999999999999988776432 234444445554432 222222333445778999999999
Q ss_pred HHHHHhccCCCcEEEEEcCCC
Q psy5653 703 EVCTKYIWDRCPVVAAVGPTE 723 (740)
Q Consensus 703 ~~~~~~l~~~~~~~~v~g~~~ 723 (740)
++++. |.+++..+++++|..
T Consensus 444 ~~~~~-l~~~n~~i~~~~~~~ 463 (961)
T PRK15101 444 ARLAE-MTPQNARIWYISPQE 463 (961)
T ss_pred HHHhh-cCHhHEEEEEEeCCC
Confidence 99987 788899999999864
No 10
>KOG0960|consensus
Probab=100.00 E-value=1.5e-33 Score=267.44 Aligned_cols=333 Identities=36% Similarity=0.516 Sum_probs=252.2
Q ss_pred CCCCCcEEEEccCCCEEEEecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCccCCC------Ccchhh
Q psy5653 17 VNVPSTQVTSIDNGLRVATEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQIKPE------YGPLLV 90 (740)
Q Consensus 17 ~~~~~~~~~~l~nGl~v~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~~~~------~~~~~~ 90 (740)
...|+.+.++|+|||+|..+.+..+++.++++|++|||+|.+...|.|||||||+|+||++++....| |...||
T Consensus 29 ~~~P~t~vttL~NGlrVaTE~~~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNA 108 (467)
T KOG0960|consen 29 LSVPETEVTTLPNGLRVATEHNSASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNA 108 (467)
T ss_pred ccCCcceEEEcCCCcEEEeccCCCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhcc
Confidence 45788999999999999999999999999999999999999999999999999999999998765444 888999
Q ss_pred hhhhhhhhcccCh-----------------------hHHHHhhhhHHHHHHHHH------------HHHHHhhcCCCCcc
Q psy5653 91 ELSEEQVYMHIKP-----------------------NEVRQRKKQRKIDNEVAD------------LKLKLAACTQNGRN 135 (740)
Q Consensus 91 ~~~~~~~~~~f~~-----------------------~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~~~~~ 135 (740)
+|.+|.|.||.+. .++++|++ .|..|++. |+.-.|..+|++++
T Consensus 109 ytSReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~--vILrEmqevd~~~~eVVfdhLHatafQgtPL~~t 186 (467)
T KOG0960|consen 109 YTSREQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERD--VILREMQEVDKNHQEVVFDHLHATAFQGTPLGRT 186 (467)
T ss_pred cccccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHH--HHHHHHHHHHhhhhHHHHHHHHHHHhcCCccccc
Confidence 9999988665544 77888888 88888444 68888999999999
Q ss_pred ccccHHHHHHhhHhhhhHHHhhhhcc------------chHHHHHHHHHhccCCCCCcccccccccc--cCCCC---CCC
Q psy5653 136 IVLSNREIRLLRYLELTEEEKEKVKA------------SYKVARKLEKLEGRNREGEEGEMLSLDSV--ISGRS---TPS 198 (740)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~ 198 (740)
..|+.+.|..++..||......+|.+ +-.+.++.++.||+.+.-.....+....+ |.+.+ ..+
T Consensus 187 ilGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~FtgsEvR~rdd 266 (467)
T KOG0960|consen 187 ILGPSENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVPPARFTGSEVRVRDD 266 (467)
T ss_pred ccChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCCCccccCceeeecCC
Confidence 99999999999888998888888774 33356777899998663222222222221 21111 233
Q ss_pred CCCCccCcccCCCCCCCchhh--HHHHHHHhcc------------chhhhhhHHHHHHHHHhhcccccccCCccchhhhh
Q psy5653 199 DSGSCSGDIISPTEPLSLTDS--MLLMDDILSD------------SRLDQLDRIERIEAILTAENVAQIKPEYGPLLVEL 264 (740)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~il~~------------s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (740)
+.+..++.+.-.+++|.|||+ +++++.++|. |+|-+.+.+..+ ..++..+..+|.+.
T Consensus 267 ~lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l-----~~sfqsFnt~YkDT---- 337 (467)
T KOG0960|consen 267 DLPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQL-----CHSFQSFNTSYKDT---- 337 (467)
T ss_pred CCchhheeeeEecCCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHH-----HHHHhhhhcccccc----
Confidence 455556666667899999999 5679999993 556555534332 22222233444332
Q ss_pred hccceeeee-cCchhHHhhhhcccChhHHHHHHHHHHHhhhccCChhHHHHHhhhccceEEEeccCCCCceecccceecc
Q psy5653 265 SEEQVYMHI-KPNEVRQRKKQRKIDNEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILC 343 (740)
Q Consensus 265 ~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~k~~l~~~~~~~~d~~~~~~~~ig~~~~~ 343 (740)
....+++.. .+.. +++++..+.++|.++...+++.|+.++|+.++..++++.|.+.|++.++|++.+.
T Consensus 338 GLwG~y~V~~~~~~-----------iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~ 406 (467)
T KOG0960|consen 338 GLWGIYFVTDNLTM-----------IDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLT 406 (467)
T ss_pred cceeEEEEecChhh-----------HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhh
Confidence 223566666 3333 5999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchhhHHHhhccCCCCChhHHHHHHHH
Q psy5653 344 YGRRVPLHELEARIDGTSKRSQTDLELEVEN 374 (740)
Q Consensus 344 ~~~~~~~~~l~~~~~gt~~~~~~~l~~~l~~ 374 (740)
.|.+.+.+.++.- ....+..++......
T Consensus 407 ~Grri~l~El~~r---Id~vt~~~Vr~va~k 434 (467)
T KOG0960|consen 407 YGRRIPLAELEAR---IDAVTAKDVREVASK 434 (467)
T ss_pred cCCcCChHHHHHH---HhhccHHHHHHHHHH
Confidence 9998887777652 223344455544444
No 11
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.97 E-value=2.1e-28 Score=262.42 Aligned_cols=346 Identities=17% Similarity=0.155 Sum_probs=231.8
Q ss_pred ccCCCCChhHHHHHHHHhcCe----eeEEecc-------eEEEEEEEecCCChHHHHHHHHHHHhcCCC-CHHHHHHHHH
Q psy5653 358 DGTSKRSQTDLELEVENIGAH----LNAYTSR-------EQTVFYAKCLKQDVPKAVEILADIIQNSKL-GQAEIERERG 425 (740)
Q Consensus 358 ~gt~~~~~~~l~~~l~~~g~~----~~~~~~~-------~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~-~~~~~~~~k~ 425 (740)
.||.++++.++...++..-+. +++.++. ..+.+++++++++.+.+++++.+++.++.| |.+++..+.+
T Consensus 578 lgt~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~ 657 (978)
T COG1026 578 LGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLE 657 (978)
T ss_pred cCCCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHH
Confidence 599999999999999998433 3333333 268899999999999999999999999999 4444444444
Q ss_pred HHHHHHHH-hhCCHHHHHHHHHHHHhcCCCCCCCCCCCC--hhhhccCC-----------HHHHHHHHHhhccCCceEEE
Q psy5653 426 VILREMQE-VETNLQEVVFDHLHATAFQGTPLGNTILGP--TQNIKSLQ-----------RQDLLDYVNAFYQPARMVLS 491 (740)
Q Consensus 426 ~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~it-----------~e~l~~~~~~~~~~~~~~~~ 491 (740)
+.+..+.. ..+++...+.......++....+.....|. ..-|..+. .+.|++.+++++...|+.++
T Consensus 658 q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~ 737 (978)
T COG1026 658 QYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIA 737 (978)
T ss_pred HHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEE
Confidence 44444422 223344444444433333222222211111 11122211 35688899999999999899
Q ss_pred EEcCCCHHHHHHHHHHhhCCCCC----CCCCCCCCCCCCCcccC-CCeeEEeCCCCCceeEEEEe--ecCCCCCCChHHH
Q psy5653 492 GAGGVDHDTLVKLAKEHFGNVKP----PNVDCAGVVPPAHCRYT-GSDVRVRDDAMPLAHVALAV--EGCGWESADNIPL 564 (740)
Q Consensus 492 i~G~~~~~~~~~~v~~~~~~l~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~ 564 (740)
+.|+.+ .+.+.+++-|-.+.. ...-..+...+...... .....+. .++..+...+| ...++++++.+++
T Consensus 738 i~~~~~--~~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii--~~p~a~~~l~fs~~~~~y~hpd~~~l 813 (978)
T COG1026 738 IIGDID--KILDLLENPLLKFLEHLLPGFELPTPPKNPHLDLISSLSEATII--PSPVAYNALAFSIGGLPYTHPDYAAL 813 (978)
T ss_pred EecChh--hhHHHHHHHhhhhhcccCcccccCCCCCCcchhhhccccceEEe--ccHHHHHHHhhhccCCCCCCccchHH
Confidence 999875 233333333322221 11101111111001111 2233333 23345555555 4467889999999
Q ss_pred HHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhc-CC
Q psy5653 565 MVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCK-TV 643 (740)
Q Consensus 565 ~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 643 (740)
.|++.+|+ +.+||+.+|++|+|||+++.... +.|.|.++.+++| ++.++++.+.+.++.+.. .+
T Consensus 814 ~vls~~L~------------~~~lw~~IR~~GGAYGa~as~~~--~~G~f~f~sYRDP-n~~kt~~v~~~~v~~l~s~~~ 878 (978)
T COG1026 814 QVLSEYLG------------SGYLWNKIREKGGAYGASASIDA--NRGVFSFASYRDP-NILKTYKVFRKSVKDLASGNF 878 (978)
T ss_pred HHHHHHhc------------cchhHHHHHhhcccccccccccc--CCCeEEEEecCCC-cHHHHHHHHHHHHHHHHcCCC
Confidence 99999998 79999999999999999887765 4678999999999 999999999999999987 79
Q ss_pred CHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhccC--CCcEEEEEcC
Q psy5653 644 TPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWD--RCPVVAAVGP 721 (740)
Q Consensus 644 s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~~--~~~~~~v~g~ 721 (740)
+++|+++++-+.+..+..+. ++...+..-......+..++..+.++++|.+||++||++..++|+.+ +.-.+++++.
T Consensus 879 ~~~d~~~~ilg~i~~~d~p~-sp~~~~~~s~~~~~sg~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~~~ 957 (978)
T COG1026 879 DERDLEEAILGIISTLDTPE-SPASEGSKSFYRDLSGLTDEERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVFAG 957 (978)
T ss_pred CHHHHHHHHHHhhccccccc-CCcceehhhHHHHHhcCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEEec
Confidence 99999999999998887666 44444433323344444444568899999999999999999999874 5667777776
Q ss_pred CC
Q psy5653 722 TE 723 (740)
Q Consensus 722 ~~ 723 (740)
..
T Consensus 958 ~e 959 (978)
T COG1026 958 EE 959 (978)
T ss_pred hh
Confidence 43
No 12
>PTZ00432 falcilysin; Provisional
Probab=99.97 E-value=7.4e-29 Score=287.05 Aligned_cols=377 Identities=13% Similarity=0.090 Sum_probs=280.9
Q ss_pred ccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhc--CeeeEEecceEEEEEEEecCC-ChHHHHHHHHHHHhc
Q psy5653 337 IGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIG--AHLNAYTSREQTVFYAKCLKQ-DVPKAVEILADIIQN 412 (740)
Q Consensus 337 ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~l~~~l~~ 412 (740)
+.....+.+..|..|.++| +|+||++++..++...++..| +.+|++|+.|.|.|.+++.++ ++..+++++.+.+.+
T Consensus 120 i~f~T~~~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~ 199 (1119)
T PTZ00432 120 FYVPTPPHNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTFKDRTSYLFASTNEKDFYNTADVYMDSVFQ 199 (1119)
T ss_pred EEecCCCCCCcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCCCCceEEEeccCCHHHHHHHHHHHHHHHhC
Confidence 4444445678899999999 899999999999999998876 679999999999999999886 699999999999999
Q ss_pred CCCCHHHH--H---------HH--------------------HHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCC
Q psy5653 413 SKLGQAEI--E---------RE--------------------RGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTIL 461 (740)
Q Consensus 413 ~~~~~~~~--~---------~~--------------------k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 461 (740)
|.|+++++ . ++ +.++.+|++...++|..++.+.+...+| +|||+++..
T Consensus 200 P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~~~~~lf-~~pY~~~~~ 278 (1119)
T PTZ00432 200 PNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKKRFSDPLSFGYSVIYQNLF-SNVYKYDSG 278 (1119)
T ss_pred cCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHHhhCCHHHHHHHHHHHHHh-CCCCCCCCC
Confidence 99988753 2 21 7789999999999999999999999999 999999999
Q ss_pred CChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCC----C--CCCCCC-CcccCC-C
Q psy5653 462 GPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDC----A--GVVPPA-HCRYTG-S 533 (740)
Q Consensus 462 ~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~----~--~~~~~~-~~~~~~-~ 533 (740)
|.+++|..+|.+++++||++||.|+|++++|+||++++++.++++++|+.+|...... + +..+++ ...... .
T Consensus 279 G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (1119)
T PTZ00432 279 GDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHPKTGQLSHTAYREDADENLLYEEYKDKPK 358 (1119)
T ss_pred CChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhcccccccccccccccccccccccccccCCe
Confidence 9999999999999999999999999999999999999999999999998887542110 0 000000 001111 1
Q ss_pred eeE--EeCCCCCceeEEEE-eecCCC-----------C-CCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCe
Q psy5653 534 DVR--VRDDAMPLAHVALA-VEGCGW-----------E-SADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFA 598 (740)
Q Consensus 534 ~~~--~~~~~~~~~~v~~~-~~~~~~-----------~-~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~ 598 (740)
.+. ...++..+..+.++ |..++. . .+++.++.||+.+||+ |+ ++||++.||++|++
T Consensus 359 ~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLgg-------g~--sS~L~q~LrE~GLa 429 (1119)
T PTZ00432 359 HVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLG-------TP--ESVLYKALIDSGLG 429 (1119)
T ss_pred EEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcC-------CC--ccHHHHHHHhcCCC
Confidence 121 11222335566665 876321 2 2578899999999983 44 89999999988999
Q ss_pred EEE-EeecccCCCCceEEEEEE-eC-------CCCHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHhccC---
Q psy5653 599 HSF-QSFNTCYKDTGLWGVYFV-AD-------RMQLEDMTFSVQHEWIRLC-KTVTPAEVERAKNLLKSNLFLQLDG--- 665 (740)
Q Consensus 599 Y~v-~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~l~-~~~s~~el~~~k~~~~~~~~~~~~~--- 665 (740)
|++ ++++......+.|.+++. ++ +++++++.+.+.+.|+++. +|+++++++++++.+.-.+.....+
T Consensus 430 ~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~rE~~~~~~p 509 (1119)
T PTZ00432 430 KKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMKELNLGTYP 509 (1119)
T ss_pred cCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhccCCCCC
Confidence 985 445555566778888876 33 2347789999999999997 4999999999999988777655321
Q ss_pred -hHHHHHHHHHHHHHhCCCCC---hHHHHHHHcc---cCHHHHHHHHHHhccCCCc-EEEEEcCCC
Q psy5653 666 -TTPVCEDIGRQILCYGRRVP---LHELEARIDD---VTAKDIHEVCTKYIWDRCP-VVAAVGPTE 723 (740)
Q Consensus 666 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~---vT~edv~~~~~~~l~~~~~-~~~v~g~~~ 723 (740)
....+..+...+..++.+.. ....++.|+. -+..-+.+++++||-.++. .++++-|..
T Consensus 510 ~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~N~h~~~v~~~p~~ 575 (1119)
T PTZ00432 510 KGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLNNNHRVTVHLEAVE 575 (1119)
T ss_pred cHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccCCCeeeEEEEecCC
Confidence 23444555555554444443 2333444431 2335689999999854443 444444543
No 13
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=99.97 E-value=2e-27 Score=257.63 Aligned_cols=538 Identities=13% Similarity=0.035 Sum_probs=317.6
Q ss_pred EEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc-------CCCCcchhhhhhh
Q psy5653 23 QVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI-------KPEYGPLLVELSE 94 (740)
Q Consensus 23 ~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~-------~~~~~~~~~~~~~ 94 (740)
++.+|+|||+|+ ++++..|.++++++|++||++||++++|+|||+|||+|+||++++.- ...|+..||+|..
T Consensus 1 r~~tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~ 80 (696)
T TIGR02110 1 RRITLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLE 80 (696)
T ss_pred CeEEcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcC
Confidence 357899999999 88899999999999999999999999999999999999999987642 1137777777755
Q ss_pred hh----------------------h-hcccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCCCCcccccc
Q psy5653 95 EQ----------------------V-YMHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQNGRNIVLS 139 (740)
Q Consensus 95 ~~----------------------~-~~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~~~~~~~~~ 139 (740)
|. + +|.|+.+++++|++ +|.+|+.. +...+++.|+|++...|+
T Consensus 81 d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~--vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt 158 (696)
T TIGR02110 81 RTTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQRERE--VLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGS 158 (696)
T ss_pred CeEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 44 3 57777799999999 99999764 455667788999999999
Q ss_pred HHHHHHhh---HhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCccccccccccc-CCC---CCCCCC
Q psy5653 140 NREIRLLR---YLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEGEMLSLDSVI-SGR---STPSDS 200 (740)
Q Consensus 140 ~~~~~~~~---~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~ 200 (740)
..++..++ ..++..++..+|.+... +.+.++++|+.|+.+..... ....+. ... -.....
T Consensus 159 ~esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~ 237 (696)
T TIGR02110 159 RDSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQ-APPAPLLRFDRLTLAGGSE 237 (696)
T ss_pred HHHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCC-CCCCCCCCCceeEEEecCc
Confidence 99998654 78899999888876333 46666888998875432211 111110 000 011123
Q ss_pred CCccCcccCCCCCCCchhhHHHHHHHhcc---chhhhhhHHHHHHHHHhhcccccccCCccchhhhhhccceeeeecCch
Q psy5653 201 GSCSGDIISPTEPLSLTDSMLLMDDILSD---SRLDQLDRIERIEAILTAENVAQIKPEYGPLLVELSEEQVYMHIKPNE 277 (740)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~---s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~ 277 (740)
.+..+.+..+..+..+++.+.++..+||+ |+|+..+|+ ++.+|...+...........+ .+++.+.+..
T Consensus 238 ~q~~l~~~~p~~~~~d~~al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~~g~~lf-------~I~~~lt~~~ 309 (696)
T TIGR02110 238 PRLWLLFALAGLPATARDNVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQDAGQALL-------ALEFSARCIS 309 (696)
T ss_pred ceEEEEEeecCCCCCChHHHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccCCCCcEE-------EEEEEEcCCC
Confidence 45556666667777778778889999987 689989985 677766654321111110111 3444442221
Q ss_pred hHHhhhhcccChhHHHHHHHHHHHhhhc---cCChhHHHHHhhhccc-----eEEE-eccC-CC-Cce---e---c----
Q psy5653 278 VRQRKKQRKIDNEDMTFSVQHEWIRLCK---TVTPAEVERAKNLLKS-----NLFL-QLDG-TT-PVC---E---D---- 336 (740)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~~el~~~k~~l~~-----~~~~-~~d~-~~-~~~---~---~---- 336 (740)
.. +.+++.+.+.+++.++.. +++.+|+.+++..--. ++-. ..+. .. +.. . .
T Consensus 310 ~~--------~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~ 381 (696)
T TIGR02110 310 AA--------AAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQTLALSPLAQLRGRALGFALGCALPDALTDFLAA 381 (696)
T ss_pred cc--------CHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhcccChHHHHhhhccCCCCcccCcchHHHHHHH
Confidence 10 135566666666666543 5678888877763211 1100 0000 00 000 0 0
Q ss_pred cc---c---eec-ccCCccch--------------------------------------hhHHHh--------------h
Q psy5653 337 IG---R---QIL-CYGRRVPL--------------------------------------HELEAR--------------I 357 (740)
Q Consensus 337 ig---~---~~~-~~~~~~~~--------------------------------------~~l~~~--------------~ 357 (740)
+. . .|- +.+..... ....++ +
T Consensus 382 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~w~~ 461 (696)
T TIGR02110 382 LQDCPRTRLLTQQQPGAPFAHSGLHAPVARLARAVVQARSVSLTLAASRCSAPKSPTRCAFLAALPSDKTERALALRWGF 461 (696)
T ss_pred HhhcccccccccCCCCcchhhhhcccccccccccccccccccccccccccccccccccchhhhccCCCCcccceeeeccC
Confidence 00 0 000 00000000 000000 0
Q ss_pred ccCCCCC--------hhHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCC--HHHHHHHHHHH
Q psy5653 358 DGTSKRS--------QTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLG--QAEIERERGVI 427 (740)
Q Consensus 358 ~gt~~~~--------~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~--~~~~~~~k~~~ 427 (740)
-+..... ..-+...+...|+.+......+...+.+.++.+-+..++..+...+..|.-. ... .+
T Consensus 462 ~~~~~~~~~~~l~~~l~~l~~~~~~~g~~~~~~~~~~~w~l~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~----- 535 (696)
T TIGR02110 462 PSHPPEELALALQRQLRPLLADARHAGVNGSWQATGASWQLLLNGPRSPMRAVFSVALALLALAAPMLAQPA-AN----- 535 (696)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcCceeEEEEcCCeEEEEcCCCchhHHHHHHHHHHHHhCCCccccccc-cc-----
Confidence 0000000 0112333444499999999999999999999999999999999998887432 110 00
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHH
Q psy5653 428 LREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKE 507 (740)
Q Consensus 428 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~ 507 (740)
...|..+..+.+.+.+ +... ..+. ... .+ .|....+. | .+... +..
T Consensus 536 -------~~~~~~i~ir~ll~~l-p~~~-~~~~----~~~-----~~--~~~~~~~~---------~-~~~~~----~~~ 581 (696)
T TIGR02110 536 -------RASAPSIPIRQLLAAL-PERL-LKSL----PAQ-----QD--DWLAARWG---------A-ATQLA----QRV 581 (696)
T ss_pred -------CCCCccchHHHHHHhc-hHhh-ccCc----ccc-----cc--chhhhhcc---------c-chhHH----HHH
Confidence 0001112222222111 0000 0000 000 00 01111111 1 01111 222
Q ss_pred hhCCCCCCCCCCCCCCCCCCcccCCCe-eEEeCCCCCceeEEEEeecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCccc
Q psy5653 508 HFGNVKPPNVDCAGVVPPAHCRYTGSD-VRVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNAS 586 (740)
Q Consensus 508 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~ 586 (740)
.+..+|.......+..++ . ..+.. ..+..+ ...+.+.+.++.+..+..+.+++.+|++++ ..
T Consensus 582 ~l~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~-~~e~alllf~p~~~~~~~~~aa~rlla~l~-------------~~ 644 (696)
T TIGR02110 582 ALQLSPGTADLARPTPLP--A-RLGRGWVPLACD-GGEQALLLFCPLPTADVASEAAWRLLAQLL-------------EP 644 (696)
T ss_pred HHHhCCCCCccCCCCCCC--c-ccccceEeccCC-CCCcEEEEEecCCCCCHHHHHHHHHHHHHh-------------ch
Confidence 233233222111111111 1 12232 333333 345677777788888888999999999999 57
Q ss_pred HHHHHHHhc-CCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHHHHHHH
Q psy5653 587 RLAAITAEQ-GFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEW 636 (740)
Q Consensus 587 ~l~~~lR~~-gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (740)
++|+.||.+ |+||.|+|.+....+..++.|-+|++.....+.++.+..++
T Consensus 645 ~f~qrlRve~qlGY~v~~~~~~~~~~~gllf~~QSP~~~~~~l~~h~~~fl 695 (696)
T TIGR02110 645 PFFQRLRVELQLGYVVFCRYRRVADRDGLLFALQSPDASARELLQHIKRFL 695 (696)
T ss_pred hHHHHHHHhhccceEEEEeeEEcCCcceeEEEEeCCCCCHHHHHHHHHHHh
Confidence 999999975 99999999999988888999999999888888877777655
No 14
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.2e-23 Score=223.28 Aligned_cols=391 Identities=16% Similarity=0.126 Sum_probs=301.9
Q ss_pred eEEEeccCCCCce-----ecccceecccCCccchhhHHH-hhccCCCCCh-hHHHHHHHHhcCeeeEEecceEEEEEEEe
Q psy5653 322 NLFLQLDGTTPVC-----EDIGRQILCYGRRVPLHELEA-RIDGTSKRSQ-TDLELEVENIGAHLNAYTSREQTVFYAKC 394 (740)
Q Consensus 322 ~~~~~~d~~~~~~-----~~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~-~~l~~~l~~~g~~~~~~~~~~~~~~~~~~ 394 (740)
.+++..|+..+.+ -.+|+...+....|.+|++|| +|.|+++|+. ..+..+++.+|++.|++|..+.|.|.+.+
T Consensus 34 ~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T~~~~T~fyFeV 113 (937)
T COG1025 34 RALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTAGERTAFYFEV 113 (937)
T ss_pred eEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCccccccCCCceeEEEEe
Confidence 4455555554443 367999999999999999999 8999999987 56999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhcc----C
Q psy5653 395 LKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKS----L 470 (740)
Q Consensus 395 ~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i 470 (740)
.++.++.+|+.+++++.+|.|+++..++++..+-+|+.....+...++.+.....+-++||+.+...|..++|.. .
T Consensus 114 ~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN~~TL~~~p~~~ 193 (937)
T COG1025 114 ENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETLSDKPGLV 193 (937)
T ss_pred cHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCChhhhccCCCch
Confidence 999999999999999999999999999999999999988777777777777666777899999999999999988 5
Q ss_pred CHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEeCCCCCceeEEEE
Q psy5653 471 QRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVRDDAMPLAHVALA 550 (740)
Q Consensus 471 t~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 550 (740)
..+++.+||+++|.+++|+++|.|+-+.+++.+++.++|+.+|......++...|+..+.....+....|..+...+.++
T Consensus 194 v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~~t~~ii~i~p~~~~~~L~i~ 273 (937)
T COG1025 194 VQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTGKIIHIVPAKPRPRLRIY 273 (937)
T ss_pred HHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChHHhCceEEeccCCCCceEEEE
Confidence 67999999999999999999999999999999999999999997654333222122233333444444555677899999
Q ss_pred eecCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccCC-CCceEEEEEE-eC--CCCH
Q psy5653 551 VEGCGWESAD-NIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCYK-DTGLWGVYFV-AD--RMQL 625 (740)
Q Consensus 551 ~~~~~~~~~~-~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~~-~~~~~~~~~~-~~--~~~~ 625 (740)
|+.+...... .-....+++++|. .| ..-|-..|.++|++-++.+...... +.+.|.+.+. ++ -.+.
T Consensus 274 f~i~~~~~~~~~~~~~~~s~Lig~------es---~gsL~~~Lk~~Glit~l~a~~~~~~~n~~~f~is~~LT~~Gl~~~ 344 (937)
T COG1025 274 FPIDDNSAKFRSKPDEYLSHLIGN------ES---PGSLLAWLKKQGLITELSAGLDPISGNYGVFAISYELTDKGLAHY 344 (937)
T ss_pred EEcCCcccccccCCHHHHHHHhcc------CC---CchHHHHHHhccchhhhccccccccCCcceEEEEeehhhcchhhH
Confidence 9998766554 5677889999985 22 2346677888899999888766554 5666777655 33 4578
Q ss_pred HHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHH
Q psy5653 626 EDMTFSVQHEWIRLCK-TVTPAEVERAKNLLKSNLFLQL-DGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHE 703 (740)
Q Consensus 626 ~~~~~~~~~~~~~l~~-~~s~~el~~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~ 703 (740)
++++..+.+.++-+.+ ++....|++..+-.-..+.... ..+...+.++....... +....-...-.+..-.+++++.
T Consensus 345 ~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~-p~~~~~~~~~~~~~yd~~~~~~ 423 (937)
T COG1025 345 DRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMERE-PVEHTLYASLVLPRYDPKAIQE 423 (937)
T ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccC-ChhhhhchhhcccccCHHHHHH
Confidence 8999999999998874 7877777776655444333332 24455555554432222 2222223334567788899999
Q ss_pred HHHHhccCCCcEEEEEcCCC
Q psy5653 704 VCTKYIWDRCPVVAAVGPTE 723 (740)
Q Consensus 704 ~~~~~l~~~~~~~~v~g~~~ 723 (740)
++.... |++.++..+++..
T Consensus 424 ~l~~~~-pen~R~~lis~~~ 442 (937)
T COG1025 424 RLALMT-PENARLWLISKLE 442 (937)
T ss_pred HHHhhC-ccceEEEEecCCC
Confidence 999777 9999999988754
No 15
>KOG0959|consensus
Probab=99.91 E-value=6.9e-22 Score=216.05 Aligned_cols=375 Identities=16% Similarity=0.129 Sum_probs=291.0
Q ss_pred ecccceecccCCccchhhHHH-hhccCCCCCh-hHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhc
Q psy5653 335 EDIGRQILCYGRRVPLHELEA-RIDGTSKRSQ-TDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQN 412 (740)
Q Consensus 335 ~~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~-~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~ 412 (740)
-.+|+...+.+..|.+|.+|| +|.||++|+. +++...+..+|++.||+|..+.|.|.+.+..++++.+|+.+++++..
T Consensus 56 V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~ 135 (974)
T KOG0959|consen 56 VKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDSEHTNYYFDVQHDHLEGALDRFAQFFSD 135 (974)
T ss_pred eeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccccccceEEEecchHHHHHHHHHHHHHhhC
Confidence 367999999999999999999 8999999986 66888899999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCC-----HHHHHHHHHhhccCCc
Q psy5653 413 SKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQ-----RQDLLDYVNAFYQPAR 487 (740)
Q Consensus 413 ~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it-----~e~l~~~~~~~~~~~~ 487 (740)
|.|++++.++++..+.+|.++...+...+..+....+.-++|||+....|..++|.... .+.|.+||++||.+++
T Consensus 136 Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~ 215 (974)
T KOG0959|consen 136 PLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNI 215 (974)
T ss_pred cccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhhhccccchHHHHHHHHHHhhccccc
Confidence 99999999999999999999888888888888888888899999999999999999988 8999999999999999
Q ss_pred eEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCC--CcccCCCeeEEeCCCCCceeEEEEeecCCCCC-CChHHH
Q psy5653 488 MVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPA--HCRYTGSDVRVRDDAMPLAHVALAVEGCGWES-ADNIPL 564 (740)
Q Consensus 488 ~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~ 564 (740)
|+++|+|+.+.+.+..++...|+.++....+. |.++.. .....+..+.+. |-.+...+.+.|+.|+..+ .+..+.
T Consensus 216 M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~-p~f~~~p~~~e~~~~~~~v~-pik~~~~l~is~~~p~~~~~y~~kP~ 293 (974)
T KOG0959|consen 216 MTLVIVGKESLDVLESLVTRLFDEISNKKKPR-PVFPEPPFLPEELKKLVRVV-PIKDGRSLMISWPVPPLNHHYKSKPL 293 (974)
T ss_pred ceEEEEcCCChhHHHHHHHHHcccccccCCCC-CcccCCCCChHHhCcEEEEE-eccccceEEEEEecCCcccccccCcH
Confidence 99999999999999999999999998876544 323221 011223344443 3345678889999987554 567788
Q ss_pred HHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecc-cCCCCceEEEEEEe-C--CCCHHHHHHHHHHHHHHhh
Q psy5653 565 MVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNT-CYKDTGLWGVYFVA-D--RMQLEDMTFSVQHEWIRLC 640 (740)
Q Consensus 565 ~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~l~ 640 (740)
+.+.+++|. .| .+-|...||.+|++-+..+... ...+.+.|.+.+.. + -+++++++..+...++.+.
T Consensus 294 ~y~~hLigh------eg---~GSL~~~Lk~~gw~~sl~a~~~~~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~ 364 (974)
T KOG0959|consen 294 RYLSHLIGH------EG---PGSLLSYLKRLGWATSLEAGIPEFASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQ 364 (974)
T ss_pred HHHHHHhcc------CC---cchHHHHHHHhhchheeecCCCccccccceEEEEEEeccccchhHHHHHHHHHHHHHHHH
Confidence 999999986 33 3457899999999988877765 33456777777763 3 4578999999999999776
Q ss_pred c-CCCHHHHHHHHHHHHHHHH-HhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhccCCCcEEEE
Q psy5653 641 K-TVTPAEVERAKNLLKSNLF-LQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRCPVVAA 718 (740)
Q Consensus 641 ~-~~s~~el~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~~~~~~~~v 718 (740)
+ +....-+++....-...+. ...+.+...+..++.... +.+..+.-.....+....++.|+++... +.|.+..+.+
T Consensus 365 ~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq-~~P~~~il~~~~ll~~~~p~~i~~~~~~-L~p~n~~v~~ 442 (974)
T KOG0959|consen 365 SAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQ-YYPVEDVLTGSYLLTEFDPDLIQEVLSS-LVPSNMRVIL 442 (974)
T ss_pred hcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcc-cCChHHhhcchhhhhhcChHHHHHHHHh-cCcccceeee
Confidence 5 4443444443332222222 223466766666655433 3233333334466778888888888754 6677888777
Q ss_pred EcCC
Q psy5653 719 VGPT 722 (740)
Q Consensus 719 ~g~~ 722 (740)
++..
T Consensus 443 ~s~~ 446 (974)
T KOG0959|consen 443 VSRS 446 (974)
T ss_pred eeec
Confidence 7653
No 16
>KOG2019|consensus
Probab=99.91 E-value=6.5e-21 Score=193.53 Aligned_cols=356 Identities=14% Similarity=0.071 Sum_probs=241.9
Q ss_pred cCCCCChhHHHHHHHHhcCeeeEEe--cce--------EEEEEEEecCCChHHHHHHHHHHHhcCCCCH-HHHHHHHHHH
Q psy5653 359 GTSKRSQTDLELEVENIGAHLNAYT--SRE--------QTVFYAKCLKQDVPKAVEILADIIQNSKLGQ-AEIERERGVI 427 (740)
Q Consensus 359 gt~~~~~~~l~~~l~~~g~~~~~~~--~~~--------~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~-~~~~~~k~~~ 427 (740)
||...+..++.+.+..+-+.++++. ..+ .+.++..+...+.+.+++++..++.++.|++ +.|+...+..
T Consensus 613 Gt~~lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s 692 (998)
T KOG2019|consen 613 GTGDLSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQS 692 (998)
T ss_pred CCCcccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHH
Confidence 9999999999999999855444433 221 4677778888999999999999999999974 4466665655
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccC------C-------HHHHHHHHHhhccCCceEEEEEc
Q psy5653 428 LREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSL------Q-------RQDLLDYVNAFYQPARMVLSGAG 494 (740)
Q Consensus 428 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i------t-------~e~l~~~~~~~~~~~~~~~~i~G 494 (740)
.+.+.+...+....+......+.+....+-....|-++.++=+ . .+.|.+..+.+...++|.+.|..
T Consensus 693 ~s~~~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itA 772 (998)
T KOG2019|consen 693 ASRMTNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITA 772 (998)
T ss_pred HHHhhccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 5555332222221121222223332111111122222222111 1 24466667777789999999998
Q ss_pred C-CCHHHHHHHHHHhhCCCCC-CCCCCCCCCCCCCcccCCCeeEEeCCCCCceeEEEEeecCCCCCCChHHHHHHHHhhc
Q psy5653 495 G-VDHDTLVKLAKEHFGNVKP-PNVDCAGVVPPAHCRYTGSDVRVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIG 572 (740)
Q Consensus 495 ~-~~~~~~~~~v~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~iL~ 572 (740)
+ .+...+++.|++++..+|. .+......-.+ ..+.....+++.-|..++.++.-+..+.++++++.+.+.|++.+|.
T Consensus 773 d~~q~~~vEkav~kFl~~lp~e~p~g~~st~d~-r~p~~~~~i~~~~P~fqvnyvgka~~~vpyt~~d~asl~vlS~~lt 851 (998)
T KOG2019|consen 773 DPKQLTNVEKAVEKFLDSLPRENPSGSKSTWDA-RLPLRSEAIRVVIPTFQVNYVGKAGLGVPYTHPDGASLQVLSKLLT 851 (998)
T ss_pred CcccchhHHHHHHHHHHhccccCCCCCccCccc-cCCCCceeEEEeccccchhhhhhhcccccCCCCCCcHHHHHHHHHH
Confidence 8 4578899999999998883 32222211111 0122233344444445678888888889999999999999999997
Q ss_pred CCCCCCCCCCCcccHHHHHHHhcCCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhc-CCCHHHHHHH
Q psy5653 573 AWDRSQGSGTNNASRLAAITAEQGFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCK-TVTPAEVERA 651 (740)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~s~~el~~~ 651 (740)
...||.++|++|+||+.+|.+... .|.|+++.+.+| ++.+.++.+...-.-++. .++++++++|
T Consensus 852 ------------~k~Lh~evRekGGAYGgg~s~~sh--~GvfSf~SYRDp-n~lktL~~f~~tgd~~~~~~~~~~dldeA 916 (998)
T KOG2019|consen 852 ------------NKWLHDEVREKGGAYGGGCSYSSH--SGVFSFYSYRDP-NPLKTLDIFDGTGDFLRGLDVDQQDLDEA 916 (998)
T ss_pred ------------HHHHHHHHHHhcCccCCccccccc--cceEEEEeccCC-chhhHHHhhcchhhhhhcCCccccchhhh
Confidence 789999999999999998877653 678999999998 777888888877776664 6999999999
Q ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhccCCC--cEEEEEcCCCCCCCHH
Q psy5653 652 KNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRC--PVVAAVGPTEQLPDYT 729 (740)
Q Consensus 652 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~~~~--~~~~v~g~~~~i~~~~ 729 (740)
|-+.+.....+....... + ..++.+...+..+..+++|.+++..|+++++.+|+..+. ..+++.|++..
T Consensus 917 kl~~f~~VDap~~P~~kG---~-~~fl~gvtDemkQarREqll~vSl~d~~~vae~yl~~~~~~~~vav~g~E~~----- 987 (998)
T KOG2019|consen 917 KLGTFGDVDAPQLPDAKG---L-LRFLLGVTDEMKQARREQLLAVSLKDFKAVAEAYLGVGDKGVAVAVAGPEDI----- 987 (998)
T ss_pred hhhhcccccCCcCCcccc---h-HHHHhcCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccCCcceEEEeeCccCc-----
Confidence 999988776555333322 2 223444444455778899999999999999999987433 44555665542
Q ss_pred HHHHHHhhhc
Q psy5653 730 WLRQSMYWIR 739 (740)
Q Consensus 730 ~~~~~~~~~~ 739 (740)
.+++..+|..
T Consensus 988 ~~a~~e~~~~ 997 (998)
T KOG2019|consen 988 DAANDERSNF 997 (998)
T ss_pred chhcCccccc
Confidence 5555555553
No 17
>KOG2583|consensus
Probab=99.91 E-value=8.6e-21 Score=181.91 Aligned_cols=383 Identities=23% Similarity=0.289 Sum_probs=292.2
Q ss_pred eccCCCCcee-----cccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecCCCh
Q psy5653 326 QLDGTTPVCE-----DIGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDV 399 (740)
Q Consensus 326 ~~d~~~~~~~-----~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l 399 (740)
..|...|+.+ .-|+.+++....+..|.+.. .+..|.+++...+.+..+..|+.++...+++.+.++++++.+++
T Consensus 36 s~e~~~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tRe~~~~tvt~lrd~~ 115 (429)
T KOG2583|consen 36 SREAPTAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATRELIGLTVTFLRDDL 115 (429)
T ss_pred eccCCCcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeecceEEEEEEEecccH
Confidence 4455555554 45888888888899999998 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHHHH
Q psy5653 400 PKAVEILADIIQNSKLGQAEIERER-GVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDY 478 (740)
Q Consensus 400 ~~~l~~l~~~l~~~~~~~~~~~~~k-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~~~ 478 (740)
+..|.+|.+++.+|.|.|.+++... ..+..++. ..+|+.++++.+++..|++ ..+.+.+...-.+.+++.++|.+|
T Consensus 116 ~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRn-gLgnslY~p~~~vg~vss~eL~~F 192 (429)
T KOG2583|consen 116 EYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRN-GLGNSLYSPGYQVGSVSSSELKDF 192 (429)
T ss_pred HHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhc-ccCCcccCCcccccCccHHHHHHH
Confidence 9999999999999999999998887 66666654 4789999999999999987 677777666567999999999999
Q ss_pred HHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEEeCCCCCceeEEEEeecCC-CC
Q psy5653 479 VNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVRDDAMPLAHVALAVEGCG-WE 557 (740)
Q Consensus 479 ~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 557 (740)
.+++|..+|++++-+| +|.+++..+.++++ .++.+-. ..+.+....+...+....+ +..++.+...+-. .+
T Consensus 193 a~k~fv~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~-----~k~a~a~~~gGe~Rk~~~g-~~~~v~vagegAAa~~ 264 (429)
T KOG2583|consen 193 AAKHFVKGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLP-----LKPAPAKYSGGEARKDARG-NRVHVAVAGEGAAAGN 264 (429)
T ss_pred HHHHhhccceEEEecC-CChHHHHHHHHHhc-cccCCCC-----CCCCCccccCCccccccCC-ceeEEEEecCcccccc
Confidence 9999999999999888 89999999999882 2222211 1111134445555554333 3455555544332 33
Q ss_pred CCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc--CCeEEEEeecccCCCCceEEEEEEeCCCCHHHHHHHHHHH
Q psy5653 558 SADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ--GFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHE 635 (740)
Q Consensus 558 ~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~--gl~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (740)
.+...+..++.++||.+...+.+ ++ +..++-.. +.+-++.++..++.+.|+|++++..+..+..+++......
T Consensus 265 ~k~~~a~av~~~~Lg~~~~~k~~----t~-~~~~aa~~a~~~~~s~sA~~a~ysDsGL~gv~~~~~~~~a~~~v~s~v~~ 339 (429)
T KOG2583|consen 265 LKVLAAQAVLLAALGNSAPVKRG----TG-LLSEAAGAAGEQGASASAFNAPYSDSGLFGVYVSAQGSQAGKVVSSEVKK 339 (429)
T ss_pred hHHHHHHHHHHHHHhcccccccc----cc-hHHHHHhhccccCceeeeecccccCCceEEEEEEecCccHHHHHHHHHHH
Confidence 57778888999999854333333 12 34444432 3455677889999999999999998877888888888888
Q ss_pred HHHhh-cCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCCCChHHHHHHHcccCHHHHHHHHHHhccCCCc
Q psy5653 636 WIRLC-KTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRCP 714 (740)
Q Consensus 636 ~~~l~-~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~~~~~l~~~~~ 714 (740)
++... .+++-.....+++.+................ ..... .-..+.++++|++||..||.+++++++. +++
T Consensus 340 lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~~~~~~-----~~a~~-~~~~d~~i~~id~Vt~sdV~~a~kk~~s-~kl 412 (429)
T KOG2583|consen 340 LKSALVSDIDNAKVKAAIKALKASYLSSVEALELATG-----SQANL-VSEPDAFIQQIDKVTASDVQKAAKKFLS-GKL 412 (429)
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHhhcchHHHHHhhH-----HHhcC-CCChHHHHHHhccccHHHHHHHHHHhcc-Ccc
Confidence 77765 4777777777777777666655544322211 11111 1256789999999999999999999874 568
Q ss_pred EEEEEcCCCCCCCHHHH
Q psy5653 715 VVAAVGPTEQLPDYTWL 731 (740)
Q Consensus 715 ~~~v~g~~~~i~~~~~~ 731 (740)
.++.+|+...+|.++|+
T Consensus 413 s~aA~Gnl~~vPY~DEL 429 (429)
T KOG2583|consen 413 SLAAYGNLSNVPYLDEL 429 (429)
T ss_pred eeeeeccccCCcccccC
Confidence 99999999999998764
No 18
>KOG2067|consensus
Probab=99.91 E-value=8.6e-23 Score=194.84 Aligned_cols=332 Identities=23% Similarity=0.304 Sum_probs=243.8
Q ss_pred CCcEEEEccCCCEEEEecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc------------------
Q psy5653 20 PSTQVTSIDNGLRVATEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI------------------ 81 (740)
Q Consensus 20 ~~~~~~~l~nGl~v~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~------------------ 81 (740)
...+.++|||||+|..++...+-++++++|++|||+|...-.|++||+|.|+|++|.+++..
T Consensus 23 ~~~kvttL~NGlkvase~~pg~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsS 102 (472)
T KOG2067|consen 23 SNTKVTTLPNGLKVASENTPGQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSS 102 (472)
T ss_pred ccceeeecCCccEEeccCCCCCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCccccccc
Confidence 37899999999999999999999999999999999999999999999999999999986421
Q ss_pred ----------CCCCcchhhhhhhhhh-hcccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCCCCccccc
Q psy5653 82 ----------KPEYGPLLVELSEEQV-YMHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQNGRNIVL 138 (740)
Q Consensus 82 ----------~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~~~~~~~~ 138 (740)
..++.+....++.|.+ +|.|+.++|+.++. .|..|++. ++...|.....|.+..+
T Consensus 103 Retm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~--~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~c 180 (472)
T KOG2067|consen 103 RETMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARR--AVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLC 180 (472)
T ss_pred HhhhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHH--hhhheccccccCchhhHHHHHHHHHhccCcccccccC
Confidence 3346777777888888 89999999999999 89888655 46777777788999999
Q ss_pred cHHHHHHhhHhhhhHHHhhhhccc-----------hHHHHHHHHHhccCCCCCcccccccccccCCC------C---CCC
Q psy5653 139 SNREIRLLRYLELTEEEKEKVKAS-----------YKVARKLEKLEGRNREGEEGEMLSLDSVISGR------S---TPS 198 (740)
Q Consensus 139 ~~~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~ 198 (740)
+...++.++...+.++...++.+. -...+.+++++++|+....+++......+.+. + ...
T Consensus 181 p~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vGV~heelv~~~~~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~d~~~~~~ 260 (472)
T KOG2067|consen 181 PEENIDKINREVLEEYLKYFYTPERMVLAGVGVEHEELVEIAEKLLGDLPSTKVPPIDESKAQYTGGELKIDTDAPQVTG 260 (472)
T ss_pred ChhhhhhhhHHHHHHHHHhcCChhheEeeecCCCHHHHHHHHHHHhccCCccCCCCcccchhhccccccccCCCCccccC
Confidence 999999987777777777766653 23466668999999864333322111111110 1 111
Q ss_pred CCCCccCcccCCCCCCCchhh--HHHHHHHhcc--------------chhhhhhHHHHHHHHHhhcccccccCCccchhh
Q psy5653 199 DSGSCSGDIISPTEPLSLTDS--MLLMDDILSD--------------SRLDQLDRIERIEAILTAENVAQIKPEYGPLLV 262 (740)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~il~~--------------s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (740)
....+++.++..+.+|.++|. +.+++..+|| |||...+ -++...+....++. .+|.+.
T Consensus 261 g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~v-LNry~wv~sctAfn---hsy~Dt-- 334 (472)
T KOG2067|consen 261 GPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNV-LNRYHWVYSCTAFN---HSYSDT-- 334 (472)
T ss_pred ccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHH-HhhhHHHHHhhhhh---ccccCC--
Confidence 113456677788899999998 6779988884 6666666 34434444443332 233222
Q ss_pred hhhccceeeeecCchhHHhhhhcccChhHHHHHHHHHHHhhhccCChhHHHHHhhhccceEEEeccCCCCceecccceec
Q psy5653 263 ELSEEQVYMHIKPNEVRQRKKQRKIDNEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQIL 342 (740)
Q Consensus 263 ~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~k~~l~~~~~~~~d~~~~~~~~ig~~~~ 342 (740)
....++....|+.. .+.++.+.+++.+...+++..|+.++|++++.-++++.++..-...++|++..
T Consensus 335 --Glfgi~~s~~P~~a-----------~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL 401 (472)
T KOG2067|consen 335 --GLFGIYASAPPQAA-----------NDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVL 401 (472)
T ss_pred --ceeEEeccCCHHHH-----------HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHH
Confidence 12255666666666 67777888888888889999999999999999999999999888899999999
Q ss_pred ccCCccchhhHHHhhccCCCCChhHHHHHHHHh
Q psy5653 343 CYGRRVPLHELEARIDGTSKRSQTDLELEVENI 375 (740)
Q Consensus 343 ~~~~~~~~~~l~~~~~gt~~~~~~~l~~~l~~~ 375 (740)
..|.+-+.+.+-. -....+..++.+..+..
T Consensus 402 ~~g~rk~p~e~~~---~Ie~lt~~DI~rva~kv 431 (472)
T KOG2067|consen 402 TTGERKPPDEFIK---KIEQLTPSDISRVASKV 431 (472)
T ss_pred hccCcCCHHHHHH---HHHhcCHHHHHHHHHHH
Confidence 8887665443322 22344556666666654
No 19
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=99.90 E-value=7.6e-22 Score=211.49 Aligned_cols=350 Identities=21% Similarity=0.248 Sum_probs=237.8
Q ss_pred CCCCcEEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCc------cCCCCcchhh
Q psy5653 18 NVPSTQVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQ------IKPEYGPLLV 90 (740)
Q Consensus 18 ~~~~~~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~------~~~~~~~~~~ 90 (740)
..+.++..+|+||++++ ...+..+.++++++|++||++|++++.|+|||+|||+|+||++++. +...|+..||
T Consensus 13 ~~~~~~~~~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na 92 (438)
T COG0612 13 ALPGLQVFTLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNA 92 (438)
T ss_pred ccccceEEEcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeec
Confidence 34459999999999999 6667799999999999999999999999999999999999876542 1112444445
Q ss_pred hh----------------------hhhhh-hcccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCCCCcc
Q psy5653 91 EL----------------------SEEQV-YMHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQNGRN 135 (740)
Q Consensus 91 ~~----------------------~~~~~-~~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~~~~~ 135 (740)
.| +.+.+ +|.|+++++++|++ .|.+|+++ +...+++.++++++
T Consensus 93 ~ts~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~--vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~ 170 (438)
T COG0612 93 FTSFDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKG--VILEEIRMRQDDPDDLAFERLLEALYGNHPLGRP 170 (438)
T ss_pred cccchhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHH--HHHHHHHhhccCchHHHHHHHHHHhhccCCCCCC
Confidence 55 55544 56777799999999 99999776 57788889999999
Q ss_pred ccccHHHHHHhhHhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCcccccccccccC-----CCCC--
Q psy5653 136 IVLSNREIRLLRYLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEGEMLSLDSVIS-----GRST-- 196 (740)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-- 196 (740)
..|+.+.+..++..+|..++..+|++... +...+++.|+.|+....+.......+.. ....
T Consensus 171 ~~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (438)
T COG0612 171 ILGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPPKIPPEPPLGPERVVRVNDPE 250 (438)
T ss_pred CCCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCCCCCCccccCCCceEEecCCC
Confidence 99999999999999999999999997443 5777799999998511111111111110 0000
Q ss_pred CCCCCCccCcccCCCCCCCch-hh--HHHHHHHhcc---chhhhhhHHHHHHHHHhhcccccccCCccchhhhhhcccee
Q psy5653 197 PSDSGSCSGDIISPTEPLSLT-DS--MLLMDDILSD---SRLDQLDRIERIEAILTAENVAQIKPEYGPLLVELSEEQVY 270 (740)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~il~~---s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 270 (740)
.....+....++.+..+..++ ++ +.+++.++|+ |||++.+|++++.+|...+...... ....+ .++
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~-~~~~~-------~~~ 322 (438)
T COG0612 251 QPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLS-DSGLF-------SIY 322 (438)
T ss_pred CchhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccccc-ccCCc-------eEE
Confidence 122334444444455555555 44 5668888886 8999999999987776653211111 00111 122
Q ss_pred eeecCchhHHhhhhcccChhHHHHHHHHHHHhhhccCChhHHHHHhhhccceEEEeccCCCCceecccceecccCCccch
Q psy5653 271 MHIKPNEVRQRKKQRKIDNEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPL 350 (740)
Q Consensus 271 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~k~~l~~~~~~~~d~~~~~~~~ig~~~~~~~~~~~~ 350 (740)
+.+.+...
T Consensus 323 ~~~~~~~~------------------------------------------------------------------------ 330 (438)
T COG0612 323 AGTAPENP------------------------------------------------------------------------ 330 (438)
T ss_pred EEecCCCh------------------------------------------------------------------------
Confidence 22222221
Q ss_pred hhHHHhhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHH-HHHHHHHhcC--CCCHHHHHHHHHHH
Q psy5653 351 HELEARIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAV-EILADIIQNS--KLGQAEIERERGVI 427 (740)
Q Consensus 351 ~~l~~~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~l~~~l~~~--~~~~~~~~~~k~~~ 427 (740)
+.....+ +.+.++.... .+++++++..|..+
T Consensus 331 ----------------------------------------------~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~ 364 (438)
T COG0612 331 ----------------------------------------------EKTAELVEEILKALKKGLKGPFTEEELDAAKQLL 364 (438)
T ss_pred ----------------------------------------------hhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 1111111 1111111111 37777888877777
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCC
Q psy5653 428 LREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVD 497 (740)
Q Consensus 428 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~ 497 (740)
...+-...++|...+........++... .......+.|+.+|.+++.++.++++.+.+++++++|+..
T Consensus 365 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~~ 432 (438)
T COG0612 365 IGLLLLSLDSPSSIAELLGQYLLLGGSL--ITLEELLERIEAVTLEDVNAVAKKLLAPENLTIVVLGPEK 432 (438)
T ss_pred HHHhhhccCCHHHHHHHHHHHHHhcCCc--cCHHHHHHHHHhcCHHHHHHHHHHhcCCCCcEEEEEcccc
Confidence 7777777788888887777766664322 2233356789999999999999999999999999999754
No 20
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.90 E-value=1.3e-21 Score=210.56 Aligned_cols=394 Identities=16% Similarity=0.172 Sum_probs=294.7
Q ss_pred ceEEEeccCCCCceecccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhc--CeeeEEecceEEEEEEEecC-
Q psy5653 321 SNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIG--AHLNAYTSREQTVFYAKCLK- 396 (740)
Q Consensus 321 ~~~~~~~d~~~~~~~~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g--~~~~~~~~~~~~~~~~~~~~- 396 (740)
..+.....++...+..++....+.+..|..|.+|| +++|+.+|+..+....+-... .-+||.|..|.|.|-++...
T Consensus 31 a~l~hi~~~d~~~vFsi~F~T~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T~YP~sS~~~ 110 (978)
T COG1026 31 AELAHIKNEDPNNVFSIAFKTEPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKTVYPASSANE 110 (978)
T ss_pred ceEEEecCCCcCceEEEEeecCCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcceeeccccCc
Confidence 34444444444455566777778889999999999 999999999988666555543 34899999999999998876
Q ss_pred CChHHHHHHHHHHHhcCCCCHHHHHHH--------------HHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCC
Q psy5653 397 QDVPKAVEILADIIQNSKLGQAEIERE--------------RGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILG 462 (740)
Q Consensus 397 ~~l~~~l~~l~~~l~~~~~~~~~~~~~--------------k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 462 (740)
+++-.++.+..|.+..|.+.++.|.++ +.++..|++...+++..+++..+.+.+|++..|+...+|
T Consensus 111 ~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp~~ty~~~SGG 190 (978)
T COG1026 111 KDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFPGTTYGVNSGG 190 (978)
T ss_pred chHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHHhhCCCccccccCCC
Confidence 679999999999999999999988654 556778888888999999999999999999999999999
Q ss_pred ChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHh-hCCCCCCCCCCCCCCCCCCc----ccCCCeeEE
Q psy5653 463 PTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEH-FGNVKPPNVDCAGVVPPAHC----RYTGSDVRV 537 (740)
Q Consensus 463 ~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~-~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~ 537 (740)
.+..|..+|.|++++||+++|.|+|+.++++||++.++..+.++.. +...+.... .. .++..+. ........+
T Consensus 191 ~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~-~~-~i~~~~~~~~~~~~~~~ypi 268 (978)
T COG1026 191 DPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKREL-DV-PIPDQKAFKKPRRKVLEYPI 268 (978)
T ss_pred CcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhcccccccc-CC-CCCcccccCcccccceeecc
Confidence 9999999999999999999999999999999999999999999876 554444331 11 1111101 000111112
Q ss_pred --eCCCCCceeEEEEeecCCCCC-CChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCe-EEEEeecccCCCCce
Q psy5653 538 --RDDAMPLAHVALAVEGCGWES-ADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFA-HSFQSFNTCYKDTGL 613 (740)
Q Consensus 538 --~~~~~~~~~v~~~~~~~~~~~-~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~-Y~v~~~~~~~~~~~~ 613 (740)
...+..+..+.++|.++...+ ++..++.||..+|-+ +. .+||.+.|-+-|++ +.+...+........
T Consensus 269 ~~~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~-------~~--asPl~~~liesglg~~~~~g~~~~~~~~~~ 339 (978)
T COG1026 269 SFDEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLD-------SA--ASPLTQALIESGLGFADVSGSYDSDLKETI 339 (978)
T ss_pred CCCCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHcc-------Cc--ccHHHHHHHHcCCCcccccceeccccceeE
Confidence 223445788888999887655 678899999999963 32 89999999998888 555444444444566
Q ss_pred EEEEEE-eCCCCHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHhccChHHH--HHHHHHHHHHhCCCCCh---
Q psy5653 614 WGVYFV-ADRMQLEDMTFSVQHEWIRLC-KTVTPAEVERAKNLLKSNLFLQLDGTTPV--CEDIGRQILCYGRRVPL--- 686 (740)
Q Consensus 614 ~~~~~~-~~~~~~~~~~~~~~~~~~~l~-~~~s~~el~~~k~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--- 686 (740)
|.+.++ ++.+..++..+.+.+.++.+. +|++.+.++.++.++.-.+......+... +.+....+..++.+.+-
T Consensus 340 f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~ 419 (978)
T COG1026 340 FSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEVKSYPFGLGLMFRSLYGWLNGGDPEDSLRF 419 (978)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhhcCCCccHHHHHHhccccccCCChhhhhhh
Confidence 777666 456788889999999999986 59999999999999887777654444332 23333344555555442
Q ss_pred HHHHHHHcccCHHH--HHHHHHHhccCCC-cEEEEEcCCCCC
Q psy5653 687 HELEARIDDVTAKD--IHEVCTKYIWDRC-PVVAAVGPTEQL 725 (740)
Q Consensus 687 ~~~~~~i~~vT~ed--v~~~~~~~l~~~~-~~~~v~g~~~~i 725 (740)
..+.+.|+.--..+ +.++.++||-.++ ..++++-|...+
T Consensus 420 ~~~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~~ 461 (978)
T COG1026 420 LDYLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPEL 461 (978)
T ss_pred HHHHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChHH
Confidence 44555554433344 8999999987665 778888886543
No 21
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.85 E-value=4.3e-20 Score=174.12 Aligned_cols=178 Identities=28% Similarity=0.439 Sum_probs=143.7
Q ss_pred cCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCC---CCCCCCCCCCCcccCCCeeEEeCCCCCce
Q psy5653 469 SLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPN---VDCAGVVPPAHCRYTGSDVRVRDDAMPLA 545 (740)
Q Consensus 469 ~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (740)
++|.++|++||++||.|.||+++|+||++.+++.++++++|+.|+... ..................+.....+..++
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQS 80 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSE
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence 578999999999999999999999999999999999999999999764 11111111100122233344444444789
Q ss_pred eEEEEeecCCC-CCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeEEEEeecccCCCCceEEEEEEeCCC
Q psy5653 546 HVALAVEGCGW-ESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAHSFQSFNTCYKDTGLWGVYFVADRM 623 (740)
Q Consensus 546 ~v~~~~~~~~~-~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~~~~~~~~~~~~~~~~~~~ 623 (740)
.+.++|+.++. ++++..++.++.++|++ + ++++|+..||++ |++|++++++..+.+.+.|.+++.+.+.
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~--~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~~~~ 151 (184)
T PF05193_consen 81 IVSIAFPGPPIKDSKDYFALNLLSSLLGN-------G--MSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQVTPE 151 (184)
T ss_dssp EEEEEEEEEETGTSTTHHHHHHHHHHHHC-------S--TTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEEEGG
T ss_pred ccccccccccccccchhhHHHHHHHHHhc-------C--ccchhHHHHHhccccceEEEeeeeccccceEEEEEEEcCcc
Confidence 99999999888 89999999999999983 3 388999999975 9999999997766688999999999988
Q ss_pred CHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHH
Q psy5653 624 QLEDMTFSVQHEWIRLCK-TVTPAEVERAKNLL 655 (740)
Q Consensus 624 ~~~~~~~~~~~~~~~l~~-~~s~~el~~~k~~~ 655 (740)
++.++++.+.+.++++.+ |++++||+++|+.|
T Consensus 152 ~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 152 NLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp GHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 999999999999999986 79999999999865
No 22
>KOG2019|consensus
Probab=99.82 E-value=9.5e-18 Score=170.80 Aligned_cols=383 Identities=16% Similarity=0.155 Sum_probs=278.0
Q ss_pred ceecccceecccCCccchhhHHH-hhccCCCCChhH-HHHHHHHh-cCeeeEEecceEEEEEEEecC-CChHHHHHHHHH
Q psy5653 333 VCEDIGRQILCYGRRVPLHELEA-RIDGTSKRSQTD-LELEVENI-GAHLNAYTSREQTVFYAKCLK-QDVPKAVEILAD 408 (740)
Q Consensus 333 ~~~~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~-l~~~l~~~-g~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~l~~ 408 (740)
.+..++....+.+..+..|.++| ..+|+.+|+-.+ +...+... ..-+|+.|..|+|.|-++.-+ .++..+.++..|
T Consensus 75 ~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~yPfattN~kDf~NL~dVYLD 154 (998)
T KOG2019|consen 75 NVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFYPFATTNTKDFYNLRDVYLD 154 (998)
T ss_pred ceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcceeecccCChHHHHHHHHHhhh
Confidence 34455666667788899999999 899999999876 44444332 335899999999999997665 779999999999
Q ss_pred HHhcCCCCHHHHHHH------------------HHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccC
Q psy5653 409 IIQNSKLGQAEIERE------------------RGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSL 470 (740)
Q Consensus 409 ~l~~~~~~~~~~~~~------------------k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 470 (740)
....|.....+|.++ |.++..|++...++|...+...+.+.+++++.|+....|.+-.|..+
T Consensus 155 AtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~SGGDPl~IpdL 234 (998)
T KOG2019|consen 155 ATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVNSGGDPLDIPDL 234 (998)
T ss_pred cccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCccccccccCCCCcccCccc
Confidence 999998877777643 67778888888899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCeeEE------eCCCCCc
Q psy5653 471 QRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRV------RDDAMPL 544 (740)
Q Consensus 471 t~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 544 (740)
+.++|++||+++|.|+|+.++-.||+..++.++++..-|....+.+......... .-....++.. ......+
T Consensus 235 t~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~qk--~f~kp~rvve~~p~d~~~~p~Kq 312 (998)
T KOG2019|consen 235 TYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTFQK--LFDKPRRVVEKGPADPGDLPKKQ 312 (998)
T ss_pred cHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCcccccc--ccccCceeeeecCCCCCCCccce
Confidence 9999999999999999999999999999999999988777665554322211111 1111122211 1122356
Q ss_pred eeEEEEeecCC-CCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCe--EEEEeecccCCCCceEEEEEEe-
Q psy5653 545 AHVALAVEGCG-WESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFA--HSFQSFNTCYKDTGLWGVYFVA- 620 (740)
Q Consensus 545 ~~v~~~~~~~~-~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~--Y~v~~~~~~~~~~~~~~~~~~~- 620 (740)
..+.+.|-.+. .+..+..++.+|+++|- +| ++||+++.|-|-|+| .++.+.+......+.|++.++.
T Consensus 313 ~~~s~s~L~~~p~d~~etfaL~~L~~Ll~-------~g--psSp~yk~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGv 383 (998)
T KOG2019|consen 313 TKCSNSFLSNDPLDTYETFALKVLSHLLL-------DG--PSSPFYKALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGV 383 (998)
T ss_pred eEEEEEeecCCchhHHHHHHHHHHHHHhc-------CC--CccHHHHHHHHcCCCcccccCCCCCcccccceeeeeeccc
Confidence 77777777654 44467889999999996 34 399999999998877 5677777777777888888874
Q ss_pred CCCCHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHhccChH-HHHHHHHHHHHHhCCCCCh---HH----HHH
Q psy5653 621 DRMQLEDMTFSVQHEWIRLCK-TVTPAEVERAKNLLKSNLFLQLDGTT-PVCEDIGRQILCYGRRVPL---HE----LEA 691 (740)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~l~~-~~s~~el~~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~----~~~ 691 (740)
..++++.+.+.+...++++.+ ++..+.+|.....+-.++..+...-. .++..+...|....+++.. ++ +..
T Consensus 384 seediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~ 463 (998)
T KOG2019|consen 384 SEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQ 463 (998)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHH
Confidence 456888899999999999975 89999999888776655544332211 1222233334444445433 22 223
Q ss_pred HHcccCHHHHHHHHHHhccCCC-cEEEEEcCCCCCC
Q psy5653 692 RIDDVTAKDIHEVCTKYIWDRC-PVVAAVGPTEQLP 726 (740)
Q Consensus 692 ~i~~vT~edv~~~~~~~l~~~~-~~~~v~g~~~~i~ 726 (740)
.+..-...=++.++++|+..+. +..+-+-|....+
T Consensus 464 ~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e~~ 499 (998)
T KOG2019|consen 464 RLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPEFA 499 (998)
T ss_pred HHhhhchhHHHHHHHHHHhcCCceEEEEecCCchhh
Confidence 3333355668888899987544 3444455554443
No 23
>KOG0961|consensus
Probab=99.81 E-value=6.8e-16 Score=157.22 Aligned_cols=312 Identities=12% Similarity=0.063 Sum_probs=203.8
Q ss_pred cceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCC--C
Q psy5653 384 SREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTI--L 461 (740)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~ 461 (740)
.++-+.+.+++-.++.+.+.+.+.-.+....||+.++-...++++.++...+.+....+..+....+|+......+. .
T Consensus 632 ~~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~L 711 (1022)
T KOG0961|consen 632 YDRLVNLRIKVGADKYPLLVKWIQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDEL 711 (1022)
T ss_pred chhheeEEEEEccCCcchhHHHHHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccHH
Confidence 34568899999999999999999999999999999999999999999988778877777788888888654333221 1
Q ss_pred CChhhhccCC----------HHHHHHHHHhhccCCceEEEEEcCCCH-HHHHHHHHHhhCCCCCC-CCCC--CC----CC
Q psy5653 462 GPTQNIKSLQ----------RQDLLDYVNAFYQPARMVLSGAGGVDH-DTLVKLAKEHFGNVKPP-NVDC--AG----VV 523 (740)
Q Consensus 462 ~~~~~l~~it----------~e~l~~~~~~~~~~~~~~~~i~G~~~~-~~~~~~v~~~~~~l~~~-~~~~--~~----~~ 523 (740)
-...-++.|. ++.+....+-....+.+.+.|+||+++ +....--........-+ +.-. .+ ..
T Consensus 712 ~~Ek~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~f~~tf~~~~~ 791 (1022)
T KOG0961|consen 712 VLEKLLEEISKDVMNNPEAILEKLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQFSATFEAGEN 791 (1022)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccCCchhhcccccccCcc
Confidence 0111122221 233444443233556788999999872 22111111111111101 0000 00 00
Q ss_pred CCCCccc-CCCeeEEeCCCCCceeEEEEeecC-CCCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhcCCeEEE
Q psy5653 524 PPAHCRY-TGSDVRVRDDAMPLAHVALAVEGC-GWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFAHSF 601 (740)
Q Consensus 524 ~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~gl~Y~v 601 (740)
.+ .... ..+...+..|+++.+.+....+.. .+.++..+...+++++|+ .+.+|+|+.+|..|+||++
T Consensus 792 ~s-~e~gsssk~~~I~~p~sESs~l~~sip~~~~w~dpel~~~~l~~~YL~----------~~eGPfW~~IRG~GLAYGa 860 (1022)
T KOG0961|consen 792 VS-LELGSSSKELLIGVPGSESSFLYQSIPLDANWNDPELIPAMLFGQYLS----------QCEGPFWRAIRGDGLAYGA 860 (1022)
T ss_pred cc-eeccCCcceeEecCCCccccceeeecccccccCCcchhHHHHHHHHHH----------hcccchhhhhcccchhccc
Confidence 00 0011 113344556666667666555543 577899999999999997 3488999999999999999
Q ss_pred EeecccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHHHHhccCh-HHHHHHHHHHH
Q psy5653 602 QSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCK---TVTPAEVERAKNLLKSNLFLQLDGT-TPVCEDIGRQI 677 (740)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~s~~el~~~k~~~~~~~~~~~~~~-~~~~~~~~~~~ 677 (740)
+.+.....+. +.+.+++.+ ++..+.+.-.+.++++.. .+++.+|+.||.+.+..+....... ...+..+....
T Consensus 861 nm~~~~d~~~--~~~~iyr~a-d~~kaye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~~~~l~~ 937 (1022)
T KOG0961|consen 861 NMFVKPDRKQ--ITLSIYRCA-DPAKAYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAKISILNN 937 (1022)
T ss_pred eeEEeccCCE--EEEEeecCC-cHHHHHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHHHHHHHH
Confidence 8887765444 444444444 677788888888888865 5999999999999998877655332 22222222222
Q ss_pred HHhCCCCCh-HHHHHHHcccCHHHHHHHHHHhcc
Q psy5653 678 LCYGRRVPL-HELEARIDDVTAKDIHEVCTKYIW 710 (740)
Q Consensus 678 ~~~~~~~~~-~~~~~~i~~vT~edv~~~~~~~l~ 710 (740)
..+.+.+. ..+++.|.+||.+|+.+..+.|+.
T Consensus 938 -~~q~~~~fn~~~leri~nvT~~~~~~~~~~y~~ 970 (1022)
T KOG0961|consen 938 -FRQTPHPFNIDLLERIWNVTSEEMVKIGGPYLA 970 (1022)
T ss_pred -HHhcCCcccHHHHHHHHHhhHHHHHHhccccee
Confidence 23344444 678999999999999999988864
No 24
>KOG0961|consensus
Probab=99.77 E-value=3.1e-16 Score=159.72 Aligned_cols=371 Identities=17% Similarity=0.160 Sum_probs=262.6
Q ss_pred eecccCCccchhhHHH-hhccCCCCChhHHHHHHHHh-cCeeeEEecceEEEEEEEecC-CChHHHHHHHHHHHhcCCCC
Q psy5653 340 QILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENI-GAHLNAYTSREQTVFYAKCLK-QDVPKAVEILADIIQNSKLG 416 (740)
Q Consensus 340 ~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~l~~~l~~~~~~ 416 (740)
..+...+.|..|.++| +|.|+++|+...+.+.+... -+..|+.|+.|+|.|.++... +-+-++|....+.+..|.++
T Consensus 49 ~TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~YtLStag~dGFlklLPvy~dHiL~P~Lt 128 (1022)
T KOG0961|consen 49 VTEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDTDHTAYTLSTAGSDGFLKLLPVYIDHILTPMLT 128 (1022)
T ss_pred eeeecCCCCCchhHHHHhhhccccCCcccHHHHhhcchhcccccccccCcceEEeecccccchHHHhHHHHHhhcCcccc
Confidence 4445567888999999 89999999998877766654 457999999999999998775 66999999999999999999
Q ss_pred HHHHHHH----------HHHHHHHHHHhhCCHHHHHHHHHHHHhcC-CCCCCCCCCCChhhhccCCHHHHHHHHHhhccC
Q psy5653 417 QAEIERE----------RGVILREMQEVETNLQEVVFDHLHATAFQ-GTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQP 485 (740)
Q Consensus 417 ~~~~~~~----------k~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~ 485 (740)
++.|..+ +.++..|++..+++....+.+.....+|+ .++|.....|....|+.+|.|++++||+++|.+
T Consensus 129 deaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eTGG~~knLR~lt~ekIR~yHK~~Y~~ 208 (1022)
T KOG0961|consen 129 DEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVETGGRLKNLRELTLEKIRDYHKKFYHL 208 (1022)
T ss_pred hhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCceeccCCChhhHHHhhHHHHHHHHHHhccc
Confidence 9998654 57788888888888888888888889995 889999999999999999999999999999999
Q ss_pred CceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCC-----CCCCCCC-CCccc---CCCeeEEeCCCCCceeEEEEeecCCC
Q psy5653 486 ARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVD-----CAGVVPP-AHCRY---TGSDVRVRDDAMPLAHVALAVEGCGW 556 (740)
Q Consensus 486 ~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~-----~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~ 556 (740)
+||+++|+|+++.+++...+...-..++..... ++|.... ..... .-..+.....+..+..|.++|.+++.
T Consensus 209 sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp~~Des~G~v~~aW~g~s~ 288 (1022)
T KOG0961|consen 209 SNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFPTDDESRGAVEVAWFGHSP 288 (1022)
T ss_pred cceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCccceeeeecCCcccccceEEEEEcCCCH
Confidence 999999999999999998877765544332211 1121110 00111 11223333344557889999998776
Q ss_pred CC-CChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHh--cCCeEEEEeecccCCCCceEEEEEE-eCCCCHHHHHHHH
Q psy5653 557 ES-ADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAE--QGFAHSFQSFNTCYKDTGLWGVYFV-ADRMQLEDMTFSV 632 (740)
Q Consensus 557 ~~-~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~--~gl~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 632 (740)
.+ +...++.+|-.+|+. +. -+++-+.+.+ .-++-+|++.....- ...+.+.++ .+.+.+.+....+
T Consensus 289 sD~~t~~a~~vL~dyls~-------sa--vapf~~~fVeieDP~assv~f~~~~~v-rc~i~L~f~gVP~EKi~~~~~k~ 358 (1022)
T KOG0961|consen 289 SDLETHSALHVLFDYLSN-------SA--VAPFQKDFVEIEDPLASSVSFHIAEGV-RCDIRLNFAGVPVEKIDECAPKF 358 (1022)
T ss_pred HHhhhHHHHHHHHHHhcc-------cc--ccccccceEEecCccccceeeeeeccc-ceeEEEeecCCcHHHhhhhhHHH
Confidence 54 667889999999973 11 3566666665 367777766554322 233444444 3456666666666
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccCh--HHHHHHHHHHHHHhCCCC--ChH------HHHHHHcccCHHHHH
Q psy5653 633 QHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGT--TPVCEDIGRQILCYGRRV--PLH------ELEARIDDVTAKDIH 702 (740)
Q Consensus 633 ~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~------~~~~~i~~vT~edv~ 702 (740)
++.+.+-+ .++=+-+.......+.+++..++.. ...+..+...++ +|..+ .+. .+.+.++.-...|..
T Consensus 359 l~~l~et~-~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~-ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~ 436 (1022)
T KOG0961|consen 359 LDKLVETA-NIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQL-YGNEDGELLKKRLKELDFLKKLKSWPAKDWV 436 (1022)
T ss_pred HHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhh-ccCcchhHHHHHHHhHHHHHHHhhccHHHHH
Confidence 66664322 4665666666666666776666543 222222222222 23221 221 344678889999999
Q ss_pred HHHHHhccCCCcEEEEEcCC
Q psy5653 703 EVCTKYIWDRCPVVAAVGPT 722 (740)
Q Consensus 703 ~~~~~~l~~~~~~~~v~g~~ 722 (740)
++.++||..++..+++.-|.
T Consensus 437 ~Llnk~Fven~s~tVia~Ps 456 (1022)
T KOG0961|consen 437 QLLNKYFVENPSATVIAVPS 456 (1022)
T ss_pred HHHHHHhccCCCeEEEecCc
Confidence 99999998766666665554
No 25
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.57 E-value=3.5e-14 Score=127.74 Aligned_cols=141 Identities=40% Similarity=0.636 Sum_probs=128.2
Q ss_pred EEEeccCCCCcee-----cccceecccCCccchhhHHH-hhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecC
Q psy5653 323 LFLQLDGTTPVCE-----DIGRQILCYGRRVPLHELEA-RIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLK 396 (740)
Q Consensus 323 ~~~~~d~~~~~~~-----~ig~~~~~~~~~~~~~~l~~-~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 396 (740)
++...++..+.+. ..|...++.+..|..|.+++ ++.|+.+++..++...++..|+.+++.++.+.+.|.+++++
T Consensus 2 V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~~~~ 81 (149)
T PF00675_consen 2 VVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSASVLS 81 (149)
T ss_dssp EEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEEEEG
T ss_pred EEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEEEec
Confidence 3445555555553 56889999999999999999 89999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy5653 397 QDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGP 463 (740)
Q Consensus 397 ~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (740)
++++.+|+++.+++.+|.|++++|+++|..++.+++....+|..++...++..+|.++||+.+..|+
T Consensus 82 ~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 82 EDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp GGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred ccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999987765
No 26
>KOG2583|consensus
Probab=99.44 E-value=3.9e-13 Score=129.82 Aligned_cols=139 Identities=19% Similarity=0.262 Sum_probs=116.1
Q ss_pred CCcEEEEccCCCEEEEecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc------------------
Q psy5653 20 PSTQVTSIDNGLRVATEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI------------------ 81 (740)
Q Consensus 20 ~~~~~~~l~nGl~v~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~------------------ 81 (740)
..-...+|.|||+|...+...|+++++|.|++|||+||.+++|++|+++...|+.|++++.+
T Consensus 21 ~~~~~~kl~ngL~Vas~e~~~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~t 100 (429)
T KOG2583|consen 21 QISKTTKLVNGLTVASREAPTAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTAT 100 (429)
T ss_pred chhhhhccccceEEEeccCCCcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeee
Confidence 35677899999999988889999999999999999999999999999999999999987542
Q ss_pred ----------CCCCcchhhhhhhhhh-hcccChhHHHHhh-hhHHHHHH----------HHHHHHHHhhcCCCCcccccc
Q psy5653 82 ----------KPEYGPLLVELSEEQV-YMHIKPNEVRQRK-KQRKIDNE----------VADLKLKLAACTQNGRNIVLS 139 (740)
Q Consensus 82 ----------~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~-~~~~i~~e----------~~~~~~~~~~~~~~~~~~~~~ 139 (740)
..+..+..+..+.+.+ .|.|+||++++.. . .|..+ +++++...|.. +.|+++..+
T Consensus 101 Re~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~--ti~~~l~~~t~~~~a~e~lH~aAfRn-gLgnslY~p 177 (429)
T KOG2583|consen 101 RELIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLA--TIDADLAYQTPYTIAIEQLHAAAFRN-GLGNSLYSP 177 (429)
T ss_pred cceEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhh--hhHHHhhhcChHHHHHHHHHHHHHhc-ccCCcccCC
Confidence 3457777788888888 7899999999997 4 55555 77889999875 888888877
Q ss_pred HHHHHHhhHhhhhHHHhhhhcc
Q psy5653 140 NREIRLLRYLELTEEEKEKVKA 161 (740)
Q Consensus 140 ~~~~~~~~~~~l~~~~~~~~~~ 161 (740)
.-.+..+...+|..+..++|..
T Consensus 178 ~~~vg~vss~eL~~Fa~k~fv~ 199 (429)
T KOG2583|consen 178 GYQVGSVSSSELKDFAAKHFVK 199 (429)
T ss_pred cccccCccHHHHHHHHHHHhhc
Confidence 7677777677777777776653
No 27
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.40 E-value=9.7e-13 Score=118.35 Aligned_cols=106 Identities=25% Similarity=0.369 Sum_probs=86.6
Q ss_pred EEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc----------------------------C
Q psy5653 32 RVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI----------------------------K 82 (740)
Q Consensus 32 ~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~----------------------------~ 82 (740)
+|+ ++++..|.++++++|++||++||++++|+||+++||+|+||++++.. +
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~~~ 80 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSASVL 80 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEEEe
Confidence 577 78889999999999999999999999999999999999999987531 2
Q ss_pred CCCcchhhhhhhhhh-hcccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCCCCcccccc
Q psy5653 83 PEYGPLLVELSEEQV-YMHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQNGRNIVLS 139 (740)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~~~~~~~~~ 139 (740)
.+..+....++.+.+ .|.|+.+++++++. .+..+++. +.+.+|..++++++..++
T Consensus 81 ~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~--~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 81 SEDLEKALELLADMLFNPSFDEEEFERERE--QILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp GGGHHHHHHHHHHHHHSBGGCHHHHHHHHH--HHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred cccchhHHHHHHHHHhCCCCCHHHHHHHHH--HHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 235555666677777 89999999999988 88887555 577788888898888765
No 28
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=96.93 E-value=0.037 Score=54.08 Aligned_cols=73 Identities=22% Similarity=0.322 Sum_probs=52.9
Q ss_pred ccCCCCChhHHHHHHHHhcCeeeEEe----cc-------eEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy5653 358 DGTSKRSQTDLELEVENIGAHLNAYT----SR-------EQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGV 426 (740)
Q Consensus 358 ~gt~~~~~~~l~~~l~~~g~~~~~~~----~~-------~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~ 426 (740)
.||+++++.++...+..+-+++++++ +. ..+.++++++.++++++++++.+++.++.|++.. ++++.
T Consensus 121 lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~--rl~~l 198 (248)
T PF08367_consen 121 LGTKNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKE--RLKEL 198 (248)
T ss_dssp S-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HH--HHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHH--HHHHH
Confidence 49999999999999999855444443 11 2688999999999999999999999999998843 44544
Q ss_pred HHHHHH
Q psy5653 427 ILREMQ 432 (740)
Q Consensus 427 ~~~~~~ 432 (740)
+.+...
T Consensus 199 l~~~~s 204 (248)
T PF08367_consen 199 LKELKS 204 (248)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 29
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=95.14 E-value=0.017 Score=58.68 Aligned_cols=65 Identities=22% Similarity=0.252 Sum_probs=47.8
Q ss_pred EEccCCCEEEEecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhh--cccccCCCccCCCCcchhhhhhhhhhhc
Q psy5653 25 TSIDNGLRVATEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMA--FKLVMGRGQIKPEYGPLLVELSEEQVYM 99 (740)
Q Consensus 25 ~~l~nGl~v~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~--f~gt~~~~~~~~~~~~~~~~~~~~~~~~ 99 (740)
..|+||.+|.+.+.-..-+.+|+. +.|--.|-.+-.|+||+|||.| |-.++ --.||+|.+.++.+
T Consensus 2 IvL~NGVRiFin~~M~KDIYlGIs-~FGFe~DI~~iLGiAHLLEHILIsFD~~~---------F~ANASTaRsYMSF 68 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILISFDSSK---------FLANASTARSYMSF 68 (590)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeeecchHH---------hhcccchhhhhhhh
Confidence 469999999987765555666653 4677778788899999999999 44333 45667777776633
No 30
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=94.51 E-value=0.062 Score=49.71 Aligned_cols=154 Identities=21% Similarity=0.240 Sum_probs=89.1
Q ss_pred hHhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCc---ccccccccc---cCCC---CCCCCCCCccC
Q psy5653 147 RYLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEE---GEMLSLDSV---ISGR---STPSDSGSCSG 205 (740)
Q Consensus 147 ~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~---~~~~~~~~~~~ 205 (740)
+..++..++..++++... +.+.+.+.++.++.... ......... .... ....+..+..+
T Consensus 3 t~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 82 (184)
T PF05193_consen 3 TLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQSIV 82 (184)
T ss_dssp -HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSEEE
T ss_pred CHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 456778888888876433 56777889998885421 111110000 0000 00111245556
Q ss_pred cccCCCCCC-Cchhh--HHHHHHHhcc---chhhhhhHHHHHHHHHhhcccccccCCccchhhhhhccceeeeecCchhH
Q psy5653 206 DIISPTEPL-SLTDS--MLLMDDILSD---SRLDQLDRIERIEAILTAENVAQIKPEYGPLLVELSEEQVYMHIKPNEVR 279 (740)
Q Consensus 206 ~~~~~~~~~-~~~~~--~~~~~~il~~---s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~~~ 279 (740)
.+..+..+. .+++. +.++..++++ ++|....|++++..|...+...... ..+.+ .+.+...|...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~-~~~~~-------~i~~~~~~~~~- 153 (184)
T PF05193_consen 83 SIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYR-DSGLF-------SISFQVTPENL- 153 (184)
T ss_dssp EEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEES-SEEEE-------EEEEEEEGGGH-
T ss_pred ccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccc-cceEE-------EEEEEcCcccH-
Confidence 666666555 66666 5778899987 4888888877766555554432222 11222 44455555533
Q ss_pred HhhhhcccChhHHHHHHHHHHHhhhc-cCChhHHHHHhhhc
Q psy5653 280 QRKKQRKIDNEDMTFSVQHEWIRLCK-TVTPAEVERAKNLL 319 (740)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~el~~~k~~l 319 (740)
.++.+.+.+.++++.. ++++.|++++|+.+
T Consensus 154 ----------~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 154 ----------DEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp ----------HHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 6677788888888776 59999999988753
No 31
>PHA03081 putative metalloprotease; Provisional
Probab=92.91 E-value=0.088 Score=53.73 Aligned_cols=63 Identities=21% Similarity=0.232 Sum_probs=44.9
Q ss_pred EEccCCCEEEEecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhc--ccccCCCccCCCCcchhhhhhhhhh
Q psy5653 25 TSIDNGLRVATEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAF--KLVMGRGQIKPEYGPLLVELSEEQV 97 (740)
Q Consensus 25 ~~l~nGl~v~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f--~gt~~~~~~~~~~~~~~~~~~~~~~ 97 (740)
..|+||.++.+.+.-..-+.+|+. +.|--.|-.+-.|+||+|||.|- -.++ .-.||+|.+.++
T Consensus 2 i~~~ngvr~f~~~~m~kdiy~gi~-~fgfe~di~~~lg~ahllehili~fd~~~---------f~anast~r~ym 66 (595)
T PHA03081 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILISFDSSK---------FVANASTARSYM 66 (595)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeeecchHH---------hcccchhhhhhH
Confidence 469999999987765555666653 46777777788999999999984 3332 344566665555
No 32
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=57.19 E-value=2.1e+02 Score=30.30 Aligned_cols=152 Identities=17% Similarity=0.157 Sum_probs=86.3
Q ss_pred CCccchhhHHHhhccCCCCChhHHHHHHHHhcCeeeEEecceEEEEEEEecCC-ChHHHHHHHHHHHhc-----CCCCHH
Q psy5653 345 GRRVPLHELEARIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQ-DVPKAVEILADIIQN-----SKLGQA 418 (740)
Q Consensus 345 ~~~~~~~~l~~~~~gt~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~l~~~l~~-----~~~~~~ 418 (740)
+-.|.+|.+||..-.- +...+ --|++|.+.+..|.+..... ...+++..+..++.. ..|+..
T Consensus 35 ~iLGiAHLLEHILIsF---D~~~F---------~ANASTaRsYMSFWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~ 102 (590)
T PF03410_consen 35 EILGIAHLLEHILISF---DSSKF---------LANASTARSYMSFWCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRS 102 (590)
T ss_pred HHHhHHHHHHHHeeec---chHHh---------hcccchhhhhhhhhhhhccCCChhHHHHHHHHHhhcCCcccccccHh
Confidence 3456789999932211 11111 13677788888777766554 356777777777765 346665
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCCCCCCCCCCCChhhhccCC--HHHHHHHHHhhccCCceEEEEEcCC
Q psy5653 419 EIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQ--RQDLLDYVNAFYQPARMVLSGAGGV 496 (740)
Q Consensus 419 ~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it--~e~l~~~~~~~~~~~~~~~~i~G~~ 496 (740)
.++...+.+..|+-. .+-...+++.+. .+.++.-|. +|....+.++. .+-|.+-.++. ...|+++.|-- +
T Consensus 103 ~i~~hikELENEYYF--RnEvfHCmDvLt-fL~gGDLYN---GGRi~ML~~l~~i~~mL~~RM~~I-~GpniVIFVk~-l 174 (590)
T PF03410_consen 103 KIKNHIKELENEYYF--RNEVFHCMDVLT-FLGGGDLYN---GGRIDMLNNLNDIRNMLSNRMHRI-IGPNIVIFVKE-L 174 (590)
T ss_pred HHHHHHHHHhhhhhh--hhhHHHHHHHHH-HhcCCcccC---CchHHHHhhhHHHHHHHHHHHHhh-cCCcEEEEEec-c
Confidence 555555555555532 223334544443 334454453 55566665553 12233333444 33466666544 6
Q ss_pred CHHHHHHHHHHhhCCCCCCCC
Q psy5653 497 DHDTLVKLAKEHFGNVKPPNV 517 (740)
Q Consensus 497 ~~~~~~~~v~~~~~~l~~~~~ 517 (740)
+ +.+..++.+.||.+|.-|.
T Consensus 175 ~-~~~l~lL~~TFGtLP~cP~ 194 (590)
T PF03410_consen 175 N-PNILSLLSNTFGTLPSCPL 194 (590)
T ss_pred C-HHHHHHHHHhcCCCCCCcc
Confidence 6 4678999999999998764
No 33
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=49.00 E-value=2.6e+02 Score=27.18 Aligned_cols=116 Identities=14% Similarity=0.075 Sum_probs=62.9
Q ss_pred EeCCCCCceeEEEEeecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCcc-cHHHHHHHhc--CCeEEEEeeccc---CCC
Q psy5653 537 VRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNA-SRLAAITAEQ--GFAHSFQSFNTC---YKD 610 (740)
Q Consensus 537 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~-~~l~~~lR~~--gl~Y~v~~~~~~---~~~ 610 (740)
...+.+..+|+.+.|+....+.++...+.++..+|+.- |..+.+ .-|-..+... |+..++.+.... ...
T Consensus 84 ~~~~TnGI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~l-----gT~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~~ 158 (248)
T PF08367_consen 84 HEQPTNGIVYVRLYFDLSDLPEEDLPYLPLLTDLLGEL-----GTKNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDKY 158 (248)
T ss_dssp EE---TTEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS------BSSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECCC
T ss_pred EEcCCCCeEEEEEEecCCCCCHHHHHhHHHHHHHHHhC-----CCCCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccce
Confidence 33445568999999999988889999999999999742 111111 1222223223 233333333222 122
Q ss_pred CceEEEEEEeCCCCHHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHH
Q psy5653 611 TGLWGVYFVADRMQLEDMTFSVQHEWIRLCKTVTPAE-VERAKNLLKSNL 659 (740)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~e-l~~~k~~~~~~~ 659 (740)
...|.+...+=.++++++++.+.+.+.+. .+++.+ +..........+
T Consensus 159 ~~~l~is~k~L~~~~~~~~~ll~eil~~~--~f~d~~rl~~ll~~~~s~~ 206 (248)
T PF08367_consen 159 RPYLVISAKCLDEKLDEAFELLSEILTET--DFDDKERLKELLKELKSDM 206 (248)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHHHHHCB---TT-HHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEeHhhhHHHHHHHHHHHHhcc--CCCcHHHHHHHHHHHHHHH
Confidence 34455555566778999999888888643 466553 343443333333
No 34
>PHA03081 putative metalloprotease; Provisional
Probab=48.70 E-value=2.9e+02 Score=29.36 Aligned_cols=129 Identities=17% Similarity=0.180 Sum_probs=73.6
Q ss_pred eEEecceEEEEEEEecC-CChHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCC
Q psy5653 380 NAYTSREQTVFYAKCLK-QDVPKAVEILADIIQNSK-----LGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQG 453 (740)
Q Consensus 380 ~~~~~~~~~~~~~~~~~-~~l~~~l~~l~~~l~~~~-----~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 453 (740)
|++|.+.+..|.+.... ....+++..+..++.+.. |+...++...+.+..|+-. .+-...+++.+. .+.++
T Consensus 58 nast~r~ymsfwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYF--RnEvfHCmDvLT-fL~gG 134 (595)
T PHA03081 58 NASTARSYMSFWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYF--RNEVFHCMDVLT-FLGGG 134 (595)
T ss_pred cchhhhhhHhHhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhh--hhhhHHHHHHHH-HhcCC
Confidence 56666666666555444 335788888888888754 5554455444444444421 223334554443 33445
Q ss_pred CCCCCCCCCChhhhccCC--HHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCC
Q psy5653 454 TPLGNTILGPTQNIKSLQ--RQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNV 517 (740)
Q Consensus 454 ~~~~~~~~~~~~~l~~it--~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~ 517 (740)
.-|. +|....|.++. .+-|.+-.++. ..-|+++.|-- ++ +.+..++.+.||.+|.-|.
T Consensus 135 DLYN---GGRi~ML~~l~~i~~~L~~RM~~I-~GpniVIFVk~-ln-~~~l~lL~~TFGtLP~~P~ 194 (595)
T PHA03081 135 DLYN---GGRIDMLDNLNDVRDMLSNRMHRI-SGPNIVIFVKE-LN-PNTLSLLNNTFGTLPSCPE 194 (595)
T ss_pred cccC---CchHHHHhhhHHHHHHHHHHHHhh-cCCcEEEEEec-cC-HHHHHHHHHhcCCCCCCcc
Confidence 5453 55666666553 12223333333 33466666544 66 4578999999999998764
No 35
>cd08814 DED_Caspase_10_repeat2 Death Effector Domain, repeat 2, of Caspase-10. Death effector domain (DED) found in Caspase-10, repeat 2. Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-10 is an initiator of death receptor mediated apoptosis. Together with FADD, caspase-8 and the pseudo-caspase c-FLIP, it forms the death-inducing signaling complex (DISC), whose formation is triggered by the activation of type 1 tumor necrosis factor (TNF) receptors such as Fas, TNF receptor 1, and TRAIL receptor. It contains two N-terminal DED domains and a C-terminal caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other m
Probab=31.09 E-value=2.5e+02 Score=21.68 Aligned_cols=73 Identities=19% Similarity=0.133 Sum_probs=43.0
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhC--CCCChHHHHHHHcccCHHHHHHHHHHh
Q psy5653 631 SVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYG--RRVPLHELEARIDDVTAKDIHEVCTKY 708 (740)
Q Consensus 631 ~~~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~vT~edv~~~~~~~ 708 (740)
.+...+-++.+++|.++++..|=-+...+.....+.-. ++......+ .+++..-..+.++++. .|+..-.++|
T Consensus 3 ~yr~lL~~iSe~lt~edL~~lKFLl~~~i~~~~~t~Ld----lf~~LEk~~~L~~dnl~~L~~il~~i~-~dL~~~I~~y 77 (79)
T cd08814 3 SYRNMLYELSENITSEDLKDIIFLLKDHLPKTEKTFLS----LLAFLEKQNLLTENNLTILEDICKTVS-PDLLKNIEKY 77 (79)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHhHHHcCcccccHHH----HHHHHHhcCCCCCccHHHHHHHHHHHH-HHHHHHHHHh
Confidence 34556666777899999999996666555433333222 222222222 2334555556667777 7777776665
No 36
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=26.97 E-value=2.2e+02 Score=19.66 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=38.0
Q ss_pred hhHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHH
Q psy5653 365 QTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADII 410 (740)
Q Consensus 365 ~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l 410 (740)
...+.+.++..++.+.-....+...+.+.++.++.+.+...|.+..
T Consensus 8 ~~~v~~~l~~~~~~i~~~~y~~~V~~~v~v~~~~~~~f~~~l~~~t 53 (56)
T PF09186_consen 8 YGKVERLLEQNGIEIVDEDYTDDVTLTVAVPEEEVEEFKAQLTDLT 53 (56)
T ss_dssp HHHHHHHHHHTTTEEEEEEECTTEEEEEEEECCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEcceecceEEEEEEECHHHHHHHHHHHHHHc
Confidence 3568888999998876666666699999999999999999888764
No 37
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=25.68 E-value=1.6e+02 Score=17.80 Aligned_cols=28 Identities=18% Similarity=0.442 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy5653 401 KAVEILADIIQNSKLGQAEIERERGVIL 428 (740)
Q Consensus 401 ~~l~~l~~~l~~~~~~~~~~~~~k~~~~ 428 (740)
.-+..+.+....-.+++++|++.|..++
T Consensus 3 ~~L~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 3 DRLEKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 4567788888889999999999988765
No 38
>cd08804 Death_ank2 Death domain of Ankyrin-2. Death Domain (DD) of Ankyrin-2 (ANK-2) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-2, also called ankyrin-B (for broadly expressed), is required for proper function of the Na/Ca ion exchanger-1 in cardiomyocytes, and is thought to function in linking integral membrane proteins to the underlying cytoskeleton. Human ANK-2 is associated with "Ankyrin-B syndrome", an atypical arrythmia disorder with risk of sudden cardiac death. It also plays key roles in the brain and striated muscle. Loss of ANK-2 is associated with significant nervous system defects and sarcomere disorganization. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other
Probab=22.85 E-value=3.7e+02 Score=20.94 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=39.6
Q ss_pred HHHHHhh-c-CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH-hCCCCChHHHHHHHcccCHHHHHHHH
Q psy5653 634 HEWIRLC-K-TVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILC-YGRRVPLHELEARIDDVTAKDIHEVC 705 (740)
Q Consensus 634 ~~~~~l~-~-~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~vT~edv~~~~ 705 (740)
...+.++ + |+++.+++.++...- .+....+..+...+.. .+.......+...+.++-..||...+
T Consensus 16 ~dWk~LAr~Lg~se~dI~~i~~~~~-------~~~~eq~~~mL~~W~~r~g~~At~~~L~~aL~~i~r~Div~~~ 83 (84)
T cd08804 16 FSWTELARELDFTEEQIHQIRIENP-------NSLQDQSHALLKYWLERDGKHATDTNLMKCLTKINRMDIVHLM 83 (84)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHCc-------ccHHHHHHHHHHHHHHccCCCchHHHHHHHHHHcChHHHHHHh
Confidence 3344454 2 899999999885311 2223333333333332 23444567888999999999998764
No 39
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=21.08 E-value=1.1e+02 Score=27.71 Aligned_cols=43 Identities=19% Similarity=0.387 Sum_probs=33.7
Q ss_pred hhhccCCHHHHHHHHHhhc-cCCceEEEEEcCCCHHHHHHHHHH
Q psy5653 465 QNIKSLQRQDLLDYVNAFY-QPARMVLSGAGGVDHDTLVKLAKE 507 (740)
Q Consensus 465 ~~l~~it~e~l~~~~~~~~-~~~~~~~~i~G~~~~~~~~~~v~~ 507 (740)
-.|++.+++++++..+..- .+.++.+.++|+++++.+.++.+.
T Consensus 104 I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~~ 147 (169)
T PF01729_consen 104 IMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEYAKT 147 (169)
T ss_dssp EEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHHHHT
T ss_pred EEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHHHhc
Confidence 3567788999999988554 355699999999999998888754
No 40
>cd08317 Death_ank Death domain associated with Ankyrins. Death Domain (DD) associated with Ankyrins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. Ankyrins function as adaptor proteins and they interact, through ANK repeats, with structurally diverse membrane proteins, including ion channels/pumps, calcium release channels, and cell adhesion molecules. They play critical roles in the proper expression and membrane localization of these proteins. In mammals, this family includes ankyrin-R for restricted (or ANK1), ankyrin-B for broadly expressed (or ANK2) and ankyrin-G for general or giant (or ANK3). They are expressed in different combinations in many tissues and play non-overlapping functions. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-associati
Probab=20.20 E-value=4.2e+02 Score=20.53 Aligned_cols=74 Identities=19% Similarity=0.349 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhhc--CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH-HhCCCCChHHHHHHHcccCHHHH
Q psy5653 625 LEDMTFSVQHEWIRLCK--TVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQIL-CYGRRVPLHELEARIDDVTAKDI 701 (740)
Q Consensus 625 ~~~~~~~~~~~~~~l~~--~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~vT~edv 701 (740)
+..+.+.+-...++++. |+++.+++..+...- .+....+..+...+. ..+.......+.++|.++-..||
T Consensus 7 l~~ia~~lG~dW~~LAr~Lg~~~~dI~~i~~~~~-------~~~~eq~~~mL~~W~~r~g~~at~~~L~~AL~~i~r~Di 79 (84)
T cd08317 7 LADISNLLGSDWPQLARELGVSETDIDLIKAENP-------NSLAQQAQAMLKLWLEREGKKATGNSLEKALKKIGRDDI 79 (84)
T ss_pred HHHHHHHHhhHHHHHHHHcCCCHHHHHHHHHHCC-------CCHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHcChHHH
Confidence 33444444455555542 899999998874321 122233333333333 24445567889999999999999
Q ss_pred HHHH
Q psy5653 702 HEVC 705 (740)
Q Consensus 702 ~~~~ 705 (740)
.+-+
T Consensus 80 ~~~~ 83 (84)
T cd08317 80 VEKC 83 (84)
T ss_pred HHHh
Confidence 8653
Done!