RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5658
(196 letters)
>d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 342
Score = 105 bits (262), Expect = 5e-28
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 8/189 (4%)
Query: 1 MHYLGQSLRLRYNGFLKEEYYYGNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWNDNVG 60
+ LG+ +R RY FL E Y + + S D+DR LMSA L+PP GV+IWN +
Sbjct: 46 HYELGEYIRKRYRKFLNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILL 105
Query: 61 KFFQPIPIKSFDSSQD-LIFNDGKSCPPYEKELNKVLSREMA-DINAKYKDIYEYVAYHT 118
+QPIP+ + S+D L++ ++CP +++ ++ L E YKD + +
Sbjct: 106 --WQPIPVHTVPLSEDQLLYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLS 163
Query: 119 GRNITTLREV-NEVYQTLRIEFENGRQMPEWTKQVFPSKLKALAGLYNQVIF---YNDKM 174
G + L + ++VY L E + +P W + +KL+ L+ L ++ +
Sbjct: 164 GLHGQDLFGIWSKVYDPLYCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEK 223
Query: 175 KRIKAGHLM 183
R++ G L+
Sbjct: 224 SRLQGGVLV 232
>d1qwoa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus fumigatus [TaxId: 5085]}
Length = 435
Score = 79.9 bits (196), Expect = 2e-18
Identities = 22/176 (12%), Positives = 45/176 (25%), Gaps = 11/176 (6%)
Query: 1 MHYLGQSLRLRYNGFLKEEYYYGNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWNDNVG 60
+ G RY + + + DR + S + +G + N
Sbjct: 106 LVNSGIKFYQRYKALARSVVPF----IRASGSDRVIASGEKFIEGFQQAKLADPGATN-- 159
Query: 61 KFFQPIPIKSFDSSQDLIFNDGKSCPPYEKELNKVLSREMADINAKYKDIYEYVAYHTGR 120
+ I + +S D C +E DI H
Sbjct: 160 RAAPAISVIIPESETFNNTLDHGVCTKFEASQLGD-EVAANFTALFAPDIRARAEKHLPG 218
Query: 121 NITTLREVNEVYQTLRIEF----ENGRQMPEWTKQVFPSKLKALAGLYNQVIFYND 172
T +V + + + Q+ + + ++ K L + +Y
Sbjct: 219 VTLTDEDVVSLMDMCSFDTVARTSDASQLSPFCQLFTHNEWKKYNYLQSLGKYYGY 274
>d1dkla_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Escherichia coli [TaxId: 562]}
Length = 409
Score = 77.4 bits (189), Expect = 1e-17
Identities = 27/218 (12%), Positives = 60/218 (27%), Gaps = 35/218 (16%)
Query: 1 MHYLGQSLRLRYNGFLK----EEYYYGNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWN 56
+ YLG R R G + + +R + + + GL P + +
Sbjct: 54 IAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHT 113
Query: 57 ----DNVGKFFQPIPIKSFDSSQDLIFND-----GKSCPPYEKELNKVL----------- 96
+ F P+ + + G S +
Sbjct: 114 QADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQ 173
Query: 97 -----SREMADINAKYKDIYEYVAYHTGRNITT---LREVNEVYQTLRIEFENGRQMPEW 148
RE D + + N++ + + + + ++ G P W
Sbjct: 174 SNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGW 233
Query: 149 TKQVFPSKLKALAGLYNQ---VIFYNDKMKRIKAGHLM 183
+ + L L+N ++ ++ R +A L+
Sbjct: 234 GRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLL 271
>d1ihpa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus ficuum [TaxId: 5058]}
Length = 438
Score = 76.8 bits (188), Expect = 3e-17
Identities = 19/176 (10%), Positives = 42/176 (23%), Gaps = 10/176 (5%)
Query: 1 MHYLGQSLRLRYNGFLKEEYYYGNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWNDNVG 60
+ G RY + + S R + S + +G +
Sbjct: 107 LVNSGIKFYQRYESLTRNIVPF----IRSSGSSRVIASGKKFIEGFQSTKLKDPRAQPGQ 162
Query: 61 KFFQPIPIKSFDSSQDLIFNDGKSCPPYEKELNKVLSREMADINAKYKDIYEYVAYHTGR 120
+ + S SS + + G + EL + I + +
Sbjct: 163 SSPKIDVVISEASSSNNTLDPGTCTVFEDSELADTVEAN--FTATFVPSIRQRLENDLSG 220
Query: 121 NITTLREVNEVYQTLRIEF----ENGRQMPEWTKQVFPSKLKALAGLYNQVIFYND 172
T EV + + ++ + + L + +Y
Sbjct: 221 VTLTDTEVTYLMDMCSFDTISTSTVDTKLSPFCDLFTHDEWINYDYLQSLKKYYGH 276
>d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 72.7 bits (177), Expect = 5e-16
Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 27/216 (12%)
Query: 1 MHYLGQSLRLRY--NGFLKEEYYY--GNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWN 56
Y+G +R G +K + Y+ + R + +AQ G +P + + +
Sbjct: 57 EVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHH 116
Query: 57 ----DNVGKFFQPIPIKSFDSSQDLI------FNDGKSCPPYEKELNKVL-----SREMA 101
+ F P+ + + + L K++
Sbjct: 117 QEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKE 176
Query: 102 DINAKYKDIYEYVAYHTGRNI---TTLREVNEVYQTLRIEFENGRQMPE--WTKQVFPSK 156
D + + L+ N + +++ G M + W + +
Sbjct: 177 KQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQ 236
Query: 157 LKALAGLYNQ---VIFYNDKMKRIKAGHLMFSAIDY 189
K L+ L N +F + ++ R A L+
Sbjct: 237 WKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKA 272
>d1qfxa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus niger [TaxId: 5061]}
Length = 447
Score = 64.0 bits (155), Expect = 6e-13
Identities = 21/187 (11%), Positives = 48/187 (25%), Gaps = 21/187 (11%)
Query: 1 MHYLGQSLRLRYNGFLKEEYYYGNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWNDNVG 60
+ G + RY E + F+S R + +A+ +G + +
Sbjct: 113 AYNHGNDYKARYGHLWNGET---VVPFFSSGYGRVIETARKFGEGFFGYNYSTNAA---- 165
Query: 61 KFFQPIPIKSFDSSQDLIFNDGKSCPPYEKELNKVLSREMADINAKYKDIYEYVAYHTGR 120
I + + P + + ++ + ++K +
Sbjct: 166 --LNIIS-------ESEVMGADSLTPTCDTDNDQTTCDNLTYQLPQFKVAAARLNSQNPG 216
Query: 121 NITTLREVNEVYQTLRIEFENGRQMPEWTKQVFPSKLKALAGLYNQVIFYN----DKMKR 176
T +V + E N R W + + + + +Y DK
Sbjct: 217 MNLTASDVYNLMVMASFEL-NARPFSNWINAFTQDEWVSFGYVEDLNYYYCAGPGDKNMA 275
Query: 177 IKAGHLM 183
Sbjct: 276 AVGAVYA 282
>d2dp9a1 b.122.1.5 (A:1-120) Hypothetical protein TTHA0113 {Thermus
thermophilus [TaxId: 274]}
Length = 120
Score = 26.4 bits (58), Expect = 1.2
Identities = 4/54 (7%), Positives = 16/54 (29%)
Query: 16 LKEEYYYGNIKFYSPDIDRCLMSAQLISQGLYPPSGVNIWNDNVGKFFQPIPIK 69
L +++ ++ L + +N ++ +P+ +
Sbjct: 52 LVGVEGPFSVEELLAHQEKHLAEEAFLRAYAKDEPLYAWVLENAFRYEKPLHVP 105
>d1jb0a_ f.29.1.1 (A:) Apoprotein a1, PsaA {Synechococcus elongatus
[TaxId: 32046]}
Length = 743
Score = 26.3 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 42 ISQGLYPPSGVNIWNDNVGKFFQPIPIKS 70
+Q ++P G I N +VG F I I S
Sbjct: 101 SAQVVWPIVGQGILNGDVGGGFHGIQITS 129
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 223
Score = 25.0 bits (54), Expect = 6.1
Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 17/135 (12%)
Query: 60 GKFFQPIPIKSFDSSQDLIFNDGKSCPPYEKELNKVLSREMADINAKYKDIY-EYVAYHT 118
F P D +Q+ IF PP EL + + D+ K E V +
Sbjct: 2 PSLFNPEEFMPLDPTQEPIF------PP---ELLR-----LKDVPPKQLRFEGERVTWIQ 47
Query: 119 GRNITTLREVNEVYQTLRIEFENGRQMPEWTKQV-FPSKLKALAGLYN-QVIFYNDKMKR 176
+ L ++ + ++ N E + + A + + + +
Sbjct: 48 ASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGIS 107
Query: 177 IKAGHLMFSAIDYCH 191
A + S
Sbjct: 108 FGAACALSSVEKTLL 122
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.417
Gapped
Lambda K H
0.267 0.0484 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 793,862
Number of extensions: 37261
Number of successful extensions: 91
Number of sequences better than 10.0: 1
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 17
Length of query: 196
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 115
Effective length of database: 1,295,466
Effective search space: 148978590
Effective search space used: 148978590
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.6 bits)