Query psy5665
Match_columns 344
No_of_seqs 196 out of 2605
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 23:29:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gcu_A Putative hydroxyacylglu 100.0 2.7E-37 9.1E-42 273.6 24.7 236 41-340 3-241 (245)
2 4efz_A Metallo-beta-lactamase 100.0 5.4E-36 1.9E-40 273.0 23.6 257 40-337 4-280 (298)
3 3r2u_A Metallo-beta-lactamase 100.0 9E-31 3.1E-35 252.3 25.9 243 40-338 24-284 (466)
4 3tp9_A Beta-lactamase and rhod 100.0 3.8E-31 1.3E-35 255.9 22.4 239 41-334 4-260 (474)
5 1qh5_A Glyoxalase II, protein 100.0 2.6E-30 8.9E-35 230.5 21.6 194 51-314 10-237 (260)
6 2xf4_A Hydroxyacylglutathione 100.0 6E-29 2.1E-33 214.8 23.6 202 46-301 6-209 (210)
7 1xm8_A Glyoxalase II; structur 100.0 4.3E-29 1.5E-33 222.0 21.6 194 51-316 10-235 (254)
8 2zwr_A Metallo-beta-lactamase 100.0 4.8E-28 1.6E-32 208.7 22.5 199 44-302 4-202 (207)
9 2qed_A Hydroxyacylglutathione 100.0 6.3E-28 2.2E-32 214.9 19.4 189 51-316 17-238 (258)
10 2p18_A Glyoxalase II; metallop 100.0 1.5E-27 5.2E-32 218.0 21.3 213 30-316 18-297 (311)
11 2zo4_A Metallo-beta-lactamase 99.9 1.8E-24 6.3E-29 198.2 20.9 182 51-283 20-236 (317)
12 4eyb_A Beta-lactamase NDM-1; m 99.9 3.1E-25 1.1E-29 199.0 14.3 193 33-282 50-252 (270)
13 1k07_A FEZ-1 beta-lactamase; m 99.9 1.5E-24 5.2E-29 193.6 14.2 199 49-301 21-238 (263)
14 3m8t_A 'BLR6230 protein; subcl 99.9 3.6E-24 1.2E-28 194.1 16.8 195 48-295 50-253 (294)
15 3iog_A Beta-lactamase; hydrola 99.9 8.1E-24 2.8E-28 184.5 18.3 180 51-282 21-206 (227)
16 4hl2_A Beta-lactamase NDM-1; s 99.9 1.8E-24 6.1E-29 190.9 14.1 192 32-282 22-225 (243)
17 3l6n_A Metallo-beta-lactamase; 99.9 7.1E-24 2.4E-28 184.0 17.3 182 37-282 11-202 (219)
18 1a7t_A Metallo-beta-lactamase; 99.9 7.7E-24 2.6E-28 185.6 16.3 183 34-282 13-208 (232)
19 1m2x_A Class B carbapenemase B 99.9 4.5E-23 1.5E-27 179.6 20.1 169 51-283 25-199 (223)
20 3hnn_A Putative diflavin flavo 99.9 2.1E-23 7.1E-28 186.2 16.9 196 32-281 9-232 (262)
21 2fhx_A SPM-1; metallo-beta-lac 99.9 2.8E-23 9.4E-28 183.5 16.6 193 35-282 13-223 (246)
22 4ax1_B Metallo-beta-lactamase 99.9 1.5E-23 5.2E-28 190.7 14.6 186 48-281 53-251 (303)
23 3q6v_A Beta-lactamase; metallo 99.9 6E-23 2E-27 179.7 17.1 196 34-282 8-213 (233)
24 4ad9_A Lactb2, beta-lactamase- 99.9 5.5E-23 1.9E-27 186.1 17.1 166 51-283 30-203 (289)
25 2y8b_A Metallo-B-lactamase; hy 99.9 7.2E-23 2.5E-27 183.1 17.1 186 33-282 44-241 (265)
26 1mqo_A Beta-lactamase II; alph 99.9 1.5E-22 5.2E-27 176.7 18.5 186 33-282 17-212 (227)
27 1jjt_A IMP-1 metallo beta-lact 99.9 6.2E-23 2.1E-27 179.3 15.9 165 51-282 31-199 (228)
28 1sml_A Protein (penicillinase) 99.9 5.8E-22 2E-26 177.4 18.5 199 49-301 34-242 (269)
29 2vw8_A PA1000, PQSE; quinolone 99.9 3.3E-21 1.1E-25 175.6 18.1 185 49-282 20-225 (303)
30 3dha_A N-acyl homoserine lacto 99.9 1.2E-21 4.1E-26 173.8 11.7 170 51-281 37-240 (254)
31 4dik_A Flavoprotein; TM0755, e 99.9 7.1E-21 2.4E-25 179.5 16.8 126 51-194 50-181 (410)
32 2ohh_A Type A flavoprotein FPR 99.8 3E-20 1E-24 175.8 16.7 133 50-195 32-172 (404)
33 3esh_A Protein similar to meta 99.8 5.6E-22 1.9E-26 178.6 4.5 180 51-281 46-252 (280)
34 2cfu_A SDSA1; SDS-hydrolase, l 99.8 2.8E-20 9.6E-25 185.6 15.8 215 36-282 109-346 (658)
35 2p97_A Hypothetical protein; p 99.8 4.3E-20 1.5E-24 158.2 14.5 156 50-281 21-182 (201)
36 1ycg_A Nitric oxide reductase; 99.8 8.8E-20 3E-24 172.3 16.5 129 51-194 34-167 (398)
37 3adr_A Putative uncharacterize 99.8 1.4E-19 4.8E-24 161.0 16.0 175 51-282 18-209 (261)
38 2q9u_A A-type flavoprotein; fl 99.8 8.9E-20 3E-24 173.2 15.1 129 51-194 39-172 (414)
39 1e5d_A Rubredoxin\:oxygen oxid 99.8 1.4E-19 4.7E-24 171.2 16.2 130 50-194 32-166 (402)
40 2yhe_A SEC-alkyl sulfatase; hy 99.7 1.4E-21 4.7E-26 194.2 0.0 208 51-283 131-358 (668)
41 3aj3_A MLR6805 protein, 4-pyri 99.8 1.3E-19 4.5E-24 162.4 11.5 189 51-281 33-253 (274)
42 1ztc_A Hypothetical protein TM 99.8 6.2E-20 2.1E-24 159.5 7.6 59 51-111 33-95 (221)
43 1p9e_A Methyl parathion hydrol 99.8 4.9E-20 1.7E-24 169.9 6.9 54 53-108 97-158 (331)
44 2r2d_A AGR_PTI_140P, Zn-depend 99.8 2E-18 6.9E-23 154.8 12.2 57 52-110 42-124 (276)
45 1zkp_A Hypothetical protein BA 99.5 3.8E-14 1.3E-18 126.4 12.8 126 52-196 42-182 (268)
46 3zq4_A Ribonuclease J 1, RNAse 99.5 1.9E-13 6.5E-18 133.8 17.4 136 51-196 20-167 (555)
47 2bib_A CBPE, teichoic acid pho 99.4 1.9E-12 6.5E-17 127.0 17.2 63 51-115 16-103 (547)
48 3bk2_A RNAse J, metal dependen 99.4 6.4E-13 2.2E-17 130.5 12.9 138 50-197 27-183 (562)
49 3iek_A Ribonuclease TTHA0252; 99.4 5.5E-13 1.9E-17 126.9 10.3 139 51-195 12-164 (431)
50 2ycb_A Beta-CAsp RNAse, cleava 99.4 5E-12 1.7E-16 125.9 17.4 138 52-195 192-354 (636)
51 3md7_A Beta-lactamase-like; ss 99.4 4.2E-12 1.4E-16 114.7 14.5 134 53-195 63-211 (293)
52 2i7x_A Protein CFT2; polyadeny 99.4 5.8E-12 2E-16 126.4 14.9 141 51-195 13-181 (717)
53 2xr1_A Cleavage and polyadenyl 99.3 1.5E-12 5.3E-17 129.6 9.2 139 52-196 196-358 (640)
54 3af5_A Putative uncharacterize 99.3 5E-12 1.7E-16 126.2 12.3 147 44-196 191-370 (651)
55 2e7y_A TRNAse Z; tRNA maturati 99.3 6.2E-12 2.1E-16 112.4 11.2 119 53-184 12-146 (280)
56 3g1p_A Protein PHNP; C-P lyase 99.3 3.6E-12 1.2E-16 113.0 9.5 126 52-196 38-167 (258)
57 2i7t_A Cleavage and polyadenyl 99.3 6.5E-12 2.2E-16 120.6 10.0 143 52-197 24-183 (459)
58 2cbn_A Ribonuclease Z; phospho 99.2 8.6E-11 3E-15 106.5 14.0 120 53-184 20-152 (306)
59 2az4_A Hypothetical protein EF 99.2 6E-11 2.1E-15 112.8 13.0 138 51-196 18-192 (429)
60 1y44_A Ribonuclease Z; zinc-de 99.2 1.8E-10 6.3E-15 105.0 14.2 120 53-184 19-150 (320)
61 2p4z_A Metal-dependent hydrola 99.1 5.6E-10 1.9E-14 100.2 14.4 68 51-122 31-102 (284)
62 3kl7_A Putative metal-dependen 99.1 3.2E-10 1.1E-14 98.9 10.7 116 52-197 36-166 (235)
63 3jxp_A Coenzyme PQQ synthesis 99.1 8.1E-10 2.8E-14 100.8 11.2 135 52-195 40-203 (321)
64 3zwf_A Zinc phosphodiesterase 98.9 1.1E-08 3.9E-13 95.0 13.9 56 51-112 17-75 (368)
65 3rpc_A Possible metal-dependen 98.8 5.9E-09 2E-13 92.4 7.0 127 53-198 12-173 (264)
66 4b87_A DNA cross-LINK repair 1 98.8 1.1E-08 3.7E-13 95.0 8.3 109 64-198 36-147 (367)
67 3bv6_A Metal-dependent hydrola 98.7 2.6E-08 8.8E-13 93.0 9.3 131 53-197 69-255 (379)
68 2wyl_A L-ascorbate-6-phosphate 98.7 4.8E-08 1.6E-12 90.6 9.0 96 89-197 109-230 (360)
69 1vjn_A Zn-dependent hydrolase 98.6 4.8E-08 1.6E-12 84.2 6.3 100 51-196 18-126 (220)
70 3h3e_A Uncharacterized protein 98.6 2.9E-08 9.8E-13 87.7 5.0 62 51-123 30-92 (267)
71 3zdk_A 5' exonuclease apollo; 98.6 3.7E-07 1.3E-11 83.5 11.3 105 66-196 11-124 (336)
72 3hnn_A Putative diflavin flavo 98.2 2.4E-07 8.2E-12 81.9 1.6 93 113-241 82-176 (262)
73 4ax1_B Metallo-beta-lactamase 97.2 4.6E-05 1.6E-09 68.2 -0.4 39 205-243 167-205 (303)
74 1xm8_A Glyoxalase II; structur 97.0 0.00023 7.7E-09 62.4 2.4 23 112-134 48-70 (254)
75 3r2u_A Metallo-beta-lactamase 96.9 0.00056 1.9E-08 65.3 3.9 81 112-231 74-154 (466)
76 4efz_A Metallo-beta-lactamase 96.7 0.00031 1.1E-08 62.9 0.4 26 205-230 132-157 (298)
77 4ad9_A Lactb2, beta-lactamase- 96.6 0.00072 2.5E-08 60.1 2.1 23 112-134 72-94 (289)
78 3tp9_A Beta-lactamase and rhod 96.5 0.00084 2.9E-08 64.2 2.1 81 112-230 53-133 (474)
79 3iog_A Beta-lactamase; hydrola 96.3 0.0039 1.3E-07 52.9 4.9 41 158-199 130-171 (227)
80 2vw8_A PA1000, PQSE; quinolone 96.2 0.00079 2.7E-08 60.2 -0.0 29 166-194 153-181 (303)
81 4hl2_A Beta-lactamase NDM-1; s 96.0 0.0014 4.7E-08 56.6 0.8 47 149-196 138-184 (243)
82 2q9u_A A-type flavoprotein; fl 95.9 0.0018 6.2E-08 60.6 1.0 133 112-282 79-232 (414)
83 1e5d_A Rubredoxin\:oxygen oxid 95.9 0.0018 6.1E-08 60.3 0.7 133 112-282 73-228 (402)
84 3m8t_A 'BLR6230 protein; subcl 95.8 0.0013 4.4E-08 58.4 -0.4 43 205-247 162-204 (294)
85 4dik_A Flavoprotein; TM0755, e 95.7 0.0015 5.1E-08 61.2 -0.4 128 112-281 91-241 (410)
86 1ycg_A Nitric oxide reductase; 95.7 0.002 6.8E-08 59.9 0.3 134 112-283 74-230 (398)
87 2yhe_A SEC-alkyl sulfatase; hy 94.7 0.0018 6.1E-08 64.4 0.0 45 153-197 269-314 (668)
88 2ohh_A Type A flavoprotein FPR 95.5 0.0019 6.3E-08 60.2 -0.8 135 112-283 77-236 (404)
89 1jjt_A IMP-1 metallo beta-lact 95.3 0.0031 1E-07 53.9 0.2 40 157-196 121-161 (228)
90 1m2x_A Class B carbapenemase B 95.3 0.0029 1E-07 53.7 -0.0 29 112-142 66-94 (223)
91 3zq4_A Ribonuclease J 1, RNAse 95.2 0.0012 4.3E-08 64.3 -2.9 39 205-243 128-168 (555)
92 3l6n_A Metallo-beta-lactamase; 95.0 0.0039 1.3E-07 52.7 -0.0 24 205-228 123-147 (219)
93 3bk2_A RNAse J, metal dependen 95.0 0.0053 1.8E-07 59.9 0.7 39 205-243 142-183 (562)
94 1a7t_A Metallo-beta-lactamase; 94.9 0.0032 1.1E-07 53.9 -1.1 21 112-132 76-96 (232)
95 3esh_A Protein similar to meta 94.3 0.0039 1.3E-07 55.0 -1.8 31 165-195 176-208 (280)
96 2y8b_A Metallo-B-lactamase; hy 94.0 0.017 5.7E-07 50.5 1.5 41 154-196 159-200 (265)
97 1qh5_A Glyoxalase II, protein 93.3 0.028 9.6E-07 49.0 1.8 25 205-229 95-119 (260)
98 2zo4_A Metallo-beta-lactamase 92.9 0.036 1.2E-06 49.5 1.8 30 112-143 64-93 (317)
99 2p97_A Hypothetical protein; p 92.8 0.049 1.7E-06 45.2 2.5 31 166-197 110-141 (201)
100 4eyb_A Beta-lactamase NDM-1; m 92.4 0.027 9.4E-07 49.3 0.4 22 112-133 114-135 (270)
101 3zdk_A 5' exonuclease apollo; 92.2 0.029 1E-06 50.9 0.3 37 205-242 86-124 (336)
102 2gcu_A Putative hydroxyacylglu 92.1 0.048 1.6E-06 47.0 1.6 27 205-231 102-128 (245)
103 2p18_A Glyoxalase II; metallop 91.9 0.052 1.8E-06 48.7 1.6 24 112-135 86-109 (311)
104 1k07_A FEZ-1 beta-lactamase; m 91.9 0.058 2E-06 46.8 1.8 44 205-248 134-177 (263)
105 2xf4_A Hydroxyacylglutathione 91.2 0.076 2.6E-06 44.2 1.8 29 112-141 50-78 (210)
106 2fhx_A SPM-1; metallo-beta-lac 90.6 0.08 2.8E-06 45.2 1.5 20 113-132 71-90 (246)
107 1sml_A Protein (penicillinase) 90.4 0.091 3.1E-06 45.7 1.6 26 205-230 145-170 (269)
108 2xr1_A Cleavage and polyadenyl 89.8 0.47 1.6E-05 46.9 6.3 32 208-240 321-356 (640)
109 3aj3_A MLR6805 protein, 4-pyri 89.6 0.13 4.5E-06 44.7 2.0 18 113-130 91-108 (274)
110 1zkp_A Hypothetical protein BA 89.4 0.14 4.9E-06 44.4 2.1 38 205-243 144-183 (268)
111 2qed_A Hydroxyacylglutathione 89.0 0.12 4.1E-06 44.9 1.3 30 112-141 54-83 (258)
112 3adr_A Putative uncharacterize 87.7 0.25 8.7E-06 42.4 2.6 25 205-229 133-157 (261)
113 2cfu_A SDSA1; SDS-hydrolase, l 86.9 0.21 7.1E-06 49.6 1.6 31 113-143 164-198 (658)
114 2zwr_A Metallo-beta-lactamase 86.9 0.27 9.3E-06 40.7 2.2 30 112-142 48-77 (207)
115 3q6v_A Beta-lactamase; metallo 86.2 0.36 1.2E-05 40.6 2.6 29 112-142 65-93 (233)
116 1mqo_A Beta-lactamase II; alph 85.8 0.26 9E-06 41.5 1.5 21 113-133 81-101 (227)
117 4b87_A DNA cross-LINK repair 1 85.7 0.39 1.3E-05 44.0 2.7 39 205-244 106-147 (367)
118 3g1p_A Protein PHNP; C-P lyase 84.7 0.55 1.9E-05 40.4 3.1 37 204-241 128-166 (258)
119 2i7t_A Cleavage and polyadenyl 84.3 0.34 1.1E-05 45.8 1.7 37 205-242 144-182 (459)
120 3af5_A Putative uncharacterize 82.4 0.49 1.7E-05 46.9 2.0 36 205-241 329-369 (651)
121 3iek_A Ribonuclease TTHA0252; 80.9 0.63 2.1E-05 43.6 2.1 37 205-242 127-165 (431)
122 1p9e_A Methyl parathion hydrol 80.6 0.67 2.3E-05 41.6 2.1 70 212-281 226-303 (331)
123 2ycb_A Beta-CAsp RNAse, cleava 79.4 0.72 2.5E-05 45.5 2.0 32 208-240 318-353 (636)
124 2az4_A Hypothetical protein EF 78.8 3 0.0001 38.6 6.1 37 205-242 153-192 (429)
125 1ztc_A Hypothetical protein TM 77.2 1.1 3.6E-05 37.5 2.2 62 211-282 143-213 (221)
126 3dha_A N-acyl homoserine lacto 76.0 1.1 3.9E-05 38.1 2.1 18 113-130 103-120 (254)
127 2i7x_A Protein CFT2; polyadeny 75.3 1.2 4.1E-05 44.5 2.3 33 208-241 147-181 (717)
128 2r2d_A AGR_PTI_140P, Zn-depend 71.5 1.2 4.1E-05 38.4 1.1 68 212-281 182-260 (276)
129 2e7y_A TRNAse Z; tRNA maturati 63.5 3.4 0.00012 35.4 2.4 20 112-131 42-61 (280)
130 3md7_A Beta-lactamase-like; ss 37.1 9.9 0.00034 33.0 0.9 35 205-241 173-211 (293)
131 4gud_A Imidazole glycerol phos 30.7 48 0.0016 26.9 4.1 28 64-91 3-30 (211)
132 2wyl_A L-ascorbate-6-phosphate 30.4 21 0.00071 32.0 2.0 21 53-74 45-67 (360)
133 3kl7_A Putative metal-dependen 24.3 49 0.0017 27.5 3.1 72 205-281 117-210 (235)
134 3s5j_B Ribose-phosphate pyroph 21.2 1.1E+02 0.0037 27.1 4.8 36 62-98 212-251 (326)
135 1y44_A Ribonuclease Z; zinc-de 21.1 44 0.0015 29.0 2.2 22 112-133 57-78 (320)
No 1
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=100.00 E-value=2.7e-37 Score=273.58 Aligned_cols=236 Identities=56% Similarity=0.913 Sum_probs=185.3
Q ss_pred eeEEEEEecCcceEEEEEEeCC--CCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhh-heecc
Q psy5665 41 FLFRQLFDSISYTHTYILADKL--SKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTM-YVINT 117 (344)
Q Consensus 41 ~~~~~~~~~~~~~~~~li~~~~--~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~-~~v~~ 117 (344)
|.+++++....++|||+|.+++ +++++|||||.+..+.+.+.+++.+.+|++|++||.|.||++|+..|.+. ..+.+
T Consensus 3 m~~~~~~~~~~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v 82 (245)
T 2gcu_A 3 LLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKS 82 (245)
T ss_dssp EEEEEEEETTTTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCEE
T ss_pred cEEEEeecCCCceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCCCeE
Confidence 6788999999999999999864 46899999997656788899999999999999999999999997777652 22223
Q ss_pred ccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeee
Q psy5665 118 HVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLI 197 (344)
Q Consensus 118 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~ 197 (344)
+.+... .......+.+++.+.+|+..++++++||||++++++++++.. |+
T Consensus 83 ~~~~~~----------------------~~~~~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~----~~---- 132 (245)
T 2gcu_A 83 VISKAS----------------------GSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGA----DQ---- 132 (245)
T ss_dssp EEEGGG----------------------CCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCST----TS----
T ss_pred Eecccc----------------------cccCCEEcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCcc----cc----
Confidence 322211 111334455666666666666666666666666666655310 00
Q ss_pred ccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEe
Q psy5665 198 RGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVY 277 (344)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~ 277 (344)
+..+++|+||+++.+.++++++++++..++++|+++++..++++++++
T Consensus 133 --------------------------------~~~~~lftGD~~~~~~~~~~d~~~~~~~~~~~sl~~~l~~l~~~~~v~ 180 (245)
T 2gcu_A 133 --------------------------------PQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIY 180 (245)
T ss_dssp --------------------------------CSSCEEEEETTSBTTBCCCCSSTTCCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred --------------------------------ccccEEEECCccccCCccCCCCCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 001688899998888888888888899999999967899999887799
Q ss_pred eCCCCCCCccccHHHHHHcCCCCCCCCCHHHHHHHhhhCCCCCCcccchhhHhhhhcCCCCCC
Q psy5665 278 PAHDYHGFSHSTVGEEKLYNPRLGEQISEEKFVEIMNNLKLSLPKKIDVAVPANMKCGLQDGV 340 (344)
Q Consensus 278 pgHg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 340 (344)
||||+.....++++.++++|++++. +.++|++.++++.++.|+.+.+.++.|++||..+-.
T Consensus 181 pgHg~~~~~~sti~~e~~~n~~l~~--~~~~f~~~~~~~~~~~p~~~~~~~~~n~~~g~~~~~ 241 (245)
T 2gcu_A 181 PAHDYKGFEVSTVGEEMQHNPRLTK--DKETFKTIMSNLNLSYPKMIDVAVPANMVCGLQDVP 241 (245)
T ss_dssp ESBCSSSCCCEEHHHHHHHCTTTTS--CHHHHHHHHHTCCCCCCTTHHHHHHHHHTTTCCSSC
T ss_pred CCCCCCCCCCcCHHHHHhhCcccCC--CHHHHHHHHHhCCCCCChhHHHHHHHHHHhCCCCCC
Confidence 9999877778999999999999995 899999999999999999999999999999998743
No 2
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=5.4e-36 Score=272.97 Aligned_cols=257 Identities=32% Similarity=0.524 Sum_probs=192.0
Q ss_pred CeeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCC-----------ChHHHHHHHHHcCCcccEEEecCCchhhhcChhh
Q psy5665 40 GFLFRQLFDSISYTHTYILADKLSKECVIIDPVLE-----------QADRDVTLINQLGLTLKYVINTHVHADHITGTGK 108 (344)
Q Consensus 40 ~~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~-----------~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~ 108 (344)
.|.+++++.+..++|||+|.++++++++|||||.+ ..+.+.+.+++.+++|++|++||.|.||++|+..
T Consensus 4 ~m~i~~~~~~~~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~ 83 (298)
T 4efz_A 4 SMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPY 83 (298)
T ss_dssp SCEEEEEECTTTCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHH
T ss_pred ceEEEEEecCCcccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHH
Confidence 36688999999999999999876788999999952 4578889999999999999999999999999999
Q ss_pred hhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCce
Q psy5665 109 IKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGM 188 (344)
Q Consensus 109 ~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~i 188 (344)
|.+.+.+.++.+.....-...+...+ +..... .......+..+.+++.+.+|+..++++++||||++++++++++.+-
T Consensus 84 l~~~~~a~i~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~~~~ 161 (298)
T 4efz_A 84 LKTRVGGEIAIGRHVTRVQDVFGKLF-NAGPAF-AHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHA 161 (298)
T ss_dssp HHHHHCCEEEEETTHHHHHHHHHHHT-TCCTTS-CSSSTTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEETTC
T ss_pred HHHHhCCcEEEChhHHHHHHHHHHhc-CCcccc-cccccCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECCCcc
Confidence 99987766666654311011111111 000000 0011223456677777777777777777777777777766654110
Q ss_pred eeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcc--cccCCCCCHHHHHHHHHHH
Q psy5665 189 AFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCG--RTDFQQGDSHKLFQSVRKE 266 (344)
Q Consensus 189 L~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~--~~~~~~~~~~~~~~sl~~~ 266 (344)
- .+ ...+++|+||++|.+..+ ++++++++..++++|+ ++
T Consensus 162 ~-~~-------------------------------------~~~~~lftGD~l~~~~~g~~r~d~~~~d~~~~~~Sl-~k 202 (298)
T 4efz_A 162 A-HD-------------------------------------ARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSI-RK 202 (298)
T ss_dssp C-GG-------------------------------------GCBCEEECCSSBCCTTTCBCCCCSTTCCHHHHHHHH-HH
T ss_pred c-cc-------------------------------------CCceEEEEcCccccCCCCCccCCCCCCCHHHHHHHH-HH
Confidence 0 00 001288899988876545 8888889999999999 59
Q ss_pred HhcCCCceEEeeCCCCCC-----CccccHHHHHHcCCCCCCCCCHHHHHHHhhh--CCCCCCcccchhhHhhhhcCCC
Q psy5665 267 IFSLPDHFRVYPAHDYHG-----FSHSTVGEEKLYNPRLGEQISEEKFVEIMNN--LKLSLPKKIDVAVPANMKCGLQ 337 (344)
Q Consensus 267 l~~l~~~~~v~pgHg~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~ 337 (344)
|..++++++|+|||||.. .+.+++++++++|++++...+.++|++.++. ..++.|+.+...++.|++||..
T Consensus 203 l~~L~~~~~v~pgHg~~~~~~~~~~~sti~~e~~~n~~l~~~~~~~~fv~~~~~~~~~l~~p~~~~~~~~~n~~~g~~ 280 (298)
T 4efz_A 203 VLSLPPATRLYMCHDYQPNGRAIQYASTVADELRENVHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRL 280 (298)
T ss_dssp HTTSCTTCEEECSBCSCC---CCCCEEEHHHHHHHCTTTSTTCCHHHHHHHHHHHHTTCCCCTTHHHHHHHHTTTTCC
T ss_pred HhcCCCCEEEECCCCCCccCCCCCCccCHHHHHhhCHhhcCCCCHHHHHHHHHhcccCCCCCccHHHHHHHHHhcCCC
Confidence 999999977999999764 3689999999999999866699999999975 6778999999999999999986
No 3
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.98 E-value=9e-31 Score=252.29 Aligned_cols=243 Identities=25% Similarity=0.402 Sum_probs=187.0
Q ss_pred CeeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheecccc
Q psy5665 40 GFLFRQLFDSISYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHV 119 (344)
Q Consensus 40 ~~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~ 119 (344)
.|.+.+++.+..+.|||+|.++++++++|||||.+ .+.+++.+++.+.+|++|++||.|.||++|+..|.+.+.+.++.
T Consensus 24 ~m~i~~~~~~~~~~nsyli~~~~~~~~vlID~g~~-~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~a~v~~ 102 (466)
T 3r2u_A 24 AMFFKQFYDKHLSQASYLIGCQKTGEAMIIDPIRD-LSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYV 102 (466)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTCEEEEESCCSC-CHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHCCEEEE
T ss_pred CeEEEEEecCCccceEEEEEeCCCCEEEEEcCCCC-HHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhhCCeEEE
Confidence 36688889999999999998766789999999965 67888999999999999999999999999999998887666666
Q ss_pred ccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeecc
Q psy5665 120 HADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRG 199 (344)
Q Consensus 120 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~ 199 (344)
+.... ..+. +. ........+.+++.+.+|+..++++++||||++++++++++.+.-
T Consensus 103 ~~~~~---~~~~--~~---------~~~~~~~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~---------- 158 (466)
T 3r2u_A 103 SGESD---DTLG--YK---------NMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAG---------- 158 (466)
T ss_dssp ECCSC---TTTS--CC---------SCCTTCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGT----------
T ss_pred Ccchh---hhhc--cc---------cCCCCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCcc----------
Confidence 65421 1000 00 001144556677777777777777777777777766666541100
Q ss_pred CCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCC------C----CHHHHHHHHHHHHhc
Q psy5665 200 CGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQ------G----DSHKLFQSVRKEIFS 269 (344)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~------~----~~~~~~~sl~~~l~~ 269 (344)
..+..++|+||++|.+.++++++++ + +..++++|+ +++..
T Consensus 159 -----------------------------~~~~~~lftGD~lf~~~~gr~dl~~~~~~~~g~~~~~~~~~~~Sl-~kl~~ 208 (466)
T 3r2u_A 159 -----------------------------AQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSI-ESIKD 208 (466)
T ss_dssp -----------------------------CCSCCEEEEETTBCSSCBCCCCCCCGGGCCTTHHHHHHHHHHHHH-HHHTT
T ss_pred -----------------------------CCCceEEEECCcccCCCCCCcCccccccccCCCchHHHHHHHHHH-HHHhc
Confidence 0002388999999988889988763 2 368889999 58999
Q ss_pred CCCceEEeeCCCCCC--------CccccHHHHHHcCCCCCCCCCHHHHHHHhhhCCCCCCcccchhhHhhhhcCCCC
Q psy5665 270 LPDHFRVYPAHDYHG--------FSHSTVGEEKLYNPRLGEQISEEKFVEIMNNLKLSLPKKIDVAVPANMKCGLQD 338 (344)
Q Consensus 270 l~~~~~v~pgHg~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 338 (344)
++++++|+||||+.. .+.++++++++.|++++. .+.++|++.+....++.|+.+.+-...|.++....
T Consensus 209 L~~~~~v~PgHg~~s~~~~~~~~~~~stig~e~~~n~~l~~-~~~~~fv~~~~~~~~~~p~~~~~~~~~N~~g~~~~ 284 (466)
T 3r2u_A 209 LPDYIQIWPGHGAGSPCGKSLGAIPTSTLGYEKQTNWAFSE-NNEATFIDKLISDQPAPPHHFAQMKKINQFGMNLY 284 (466)
T ss_dssp SCTTCEEEESBCTTCGGGTTCCSSSCEEHHHHHHHCGGGTC-CCHHHHHHHHHSSCCCCCTHHHHHHHHHHHCCCCC
T ss_pred CCCCeEEECCCCCCcccccccCCCCCccHHHHHHhChhcCC-CCHHHHHHHHhhCCCCCChhHHHHHHHhccCcccc
Confidence 999888999999542 267999999999999985 68999999999999999999999999999765443
No 4
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.98 E-value=3.8e-31 Score=255.95 Aligned_cols=239 Identities=26% Similarity=0.378 Sum_probs=185.2
Q ss_pred eeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccc
Q psy5665 41 FLFRQLFDSISYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVH 120 (344)
Q Consensus 41 ~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~ 120 (344)
|.+.+++.+..++|||+|.++++++++|||||.+ .+.+++.+++.+.+|++|++||.|.||++|+..|.+.+.+.++.+
T Consensus 4 m~i~~~~~~~~~~n~yli~~~~~~~~ilID~g~~-~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~~~~i~~~ 82 (474)
T 3tp9_A 4 MYLRRFYDEGLAHASYLVGCQETGEACVIDPARD-VEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAGAAICVS 82 (474)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCEEEEESCCSC-CHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEE
T ss_pred eEEEEEecCCceeEEEEEEECCCCEEEEEcCCCC-hHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHHCCcEEEc
Confidence 5578888888999999997665688999999976 688899999999999999999999999999999998877777766
Q ss_pred cccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccC
Q psy5665 121 ADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGC 200 (344)
Q Consensus 121 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~ 200 (344)
.... ..+...+ ........+.+++.+.+|+..++++++||||++++++++++.+-- +
T Consensus 83 ~~~~---~~~~~~~----------~~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~~~~~--~-------- 139 (474)
T 3tp9_A 83 DEGP---PEWKSEY----------VKAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTS--P-------- 139 (474)
T ss_dssp CCSC---GGGCCGG----------GGGSSEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEEETTTE--E--------
T ss_pred Ccch---hhhcccc----------cccccceECCCCCEEEECCEEEEEEECCCCCCCCEEEEEecCCCC--C--------
Confidence 5431 1111100 111234567777888888877777777777777777776531000 0
Q ss_pred CCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCC------C----HHHHHHHHHHHHhcC
Q psy5665 201 GRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQG------D----SHKLFQSVRKEIFSL 270 (344)
Q Consensus 201 ~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~------~----~~~~~~sl~~~l~~l 270 (344)
...+++|+||++|.+.+++++++++ + ..++++|++ ++..+
T Consensus 140 -----------------------------~~~~~lftGD~lf~~~~g~~dl~~~~~~~~~~~~~~~~~~~~sl~-~l~~l 189 (474)
T 3tp9_A 140 -----------------------------DVPMALFSGDFVFVGDVGRPDLLERVAGESGSSEALARQMFRSLR-KFEAL 189 (474)
T ss_dssp -----------------------------EEEEEEEEETSEETTEECCSCHHHHHSCCTTHHHHHHHHHHHHHH-HHHTS
T ss_pred -----------------------------CCceEEEeCCccccCCCCCCCCCccccCCCccchHHHHHHHHHHH-HHhcC
Confidence 0015888999898888888776532 2 578899995 59999
Q ss_pred CCceEEeeCCCCCC--------CccccHHHHHHcCCCCCCCCCHHHHHHHhhhCCCCCCcccchhhHhhhhc
Q psy5665 271 PDHFRVYPAHDYHG--------FSHSTVGEEKLYNPRLGEQISEEKFVEIMNNLKLSLPKKIDVAVPANMKC 334 (344)
Q Consensus 271 ~~~~~v~pgHg~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 334 (344)
++++.|+||||+.. .+.++++.+++.|++++ ..+.++|++.+.+..++.|+.+.+..+.|.+.
T Consensus 190 ~~~~~v~PgHg~~s~~~~~~~~~~~sti~~e~~~n~~l~-~~~~~~f~~~~~~~~~~~p~~~~~~~~~N~~G 260 (474)
T 3tp9_A 190 PDHVQVLPAHGAGSACGKALGAVPSSTVGYEKLVNWALQ-HKDEDAFVQALLAGQPEAPIYFARMKLVNKVG 260 (474)
T ss_dssp CTTCEEEESBCTTCTTSSSCCBSSCEEHHHHHHHCGGGT-CCCHHHHHHHHHTTCCCCCTTHHHHHHHHHHC
T ss_pred CCCcEEECCCCCCcccccccCCCcCCCHHHHHHhChhcC-cCCHHHHHHHHhcCCCCCCccHHHHHhhhccC
Confidence 99988999999543 26799999999999998 35999999999999999999999999999875
No 5
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.97 E-value=2.6e-30 Score=230.54 Aligned_cols=194 Identities=29% Similarity=0.461 Sum_probs=142.2
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhh-eeccccccccccchhH
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMY-VINTHVHADHITGTGK 129 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d~~~~~~~ 129 (344)
..+|||+|.++++++++|||||. .+.+.+.+++.+.+|++|++||.|.||+||+..+.+.+ .+.++.+...
T Consensus 10 ~~n~~yli~~~~~~~~vlID~G~--~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~~------ 81 (260)
T 1qh5_A 10 TDNYMYLVIDDETKEAAIVDPVQ--PQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDR------ 81 (260)
T ss_dssp TTEEEEEEEETTTTEEEEESCSS--HHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTT------
T ss_pred CceEEEEEEECCCCEEEEEcCCC--HHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCCCEEEECccc------
Confidence 55779999986557899999994 57888999999999999999999999999987777654 2344433211
Q ss_pred HHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEe-CCCceeeecceeeeccCCCccccCC
Q psy5665 130 IKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVN-QGEGMAFTGDTLLIRGCGRTDFQQG 208 (344)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~-~~~~iL~~GD~~~~~~~~~~~~~~~ 208 (344)
.......+.+++.+.+|+..++++++||||++++++++ ...
T Consensus 82 ----------------~~~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~---------------------- 123 (260)
T 1qh5_A 82 ----------------IGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPG---------------------- 123 (260)
T ss_dssp ----------------STTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSS----------------------
T ss_pred ----------------CCCCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEeccC----------------------
Confidence 11123445556666666666666666666666655554 100
Q ss_pred CCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEeeCCCCC-----
Q psy5665 209 GSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHDYH----- 283 (344)
Q Consensus 209 ~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~----- 283 (344)
.+..+++|+||++|.+.+++ ++.++..++++|+++++..+++++.++||||+.
T Consensus 124 --------------------~~~~~~lftGD~l~~~~~g~--~~~~~~~~~~~Sl~~~l~~l~~~~~v~pgHg~~~~~~~ 181 (260)
T 1qh5_A 124 --------------------GSEPPAVFTGDTLFVAGCGK--FYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLK 181 (260)
T ss_dssp --------------------SSSCCEEEEETTEETTEECC--CTTCCHHHHHHHHHTTTTTSCTTCEEEESBCCHHHHHH
T ss_pred --------------------CCCCCEEEEcCccccCCcCC--CCCCCHHHHHHHHHHHHHcCCCCeEEEcCCCchhccHH
Confidence 03357888888888777776 467889999999976799999987799999963
Q ss_pred ---------------------------CCccccHHHHHHcCCCCCCCCCHHHHHHHhh
Q psy5665 284 ---------------------------GFSHSTVGEEKLYNPRLGEQISEEKFVEIMN 314 (344)
Q Consensus 284 ---------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 314 (344)
...++++++|++.|+|++. +..+|.+.+.
T Consensus 182 f~~~v~p~~~~l~~~~~~~~~~~~~~~~t~psti~~E~~~Npfl~~--~~~~~~~~~~ 237 (260)
T 1qh5_A 182 FARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRV--REKTVQQHAG 237 (260)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHTCCCCCEEHHHHHHHCTTTTT--TSHHHHHHHT
T ss_pred HHHhhCCCcHHHHHHHHHHHHHHhcCCCcCCcCHHHHHhcCCcccC--CCHHHHHHhc
Confidence 1234699999999999997 6678888776
No 6
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.97 E-value=6e-29 Score=214.75 Aligned_cols=202 Identities=23% Similarity=0.391 Sum_probs=137.1
Q ss_pred EEecCcceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheecccccccccc
Q psy5665 46 LFDSISYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHIT 125 (344)
Q Consensus 46 ~~~~~~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~ 125 (344)
+..+..+.|||+|.++.+++++|||||.. .+.+.+.+++.+.++++|++||.|.||+||+..|.+.+.+.++++...
T Consensus 6 ~~~~~~~~n~~li~~~~~~~~iLiD~G~~-~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~-- 82 (210)
T 2xf4_A 6 IPVTAFSQNCSLIWCEQTRLAALVDPGGD-AEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKE-- 82 (210)
T ss_dssp EEETTTTEEEEEEECTTTCEEEEECCCSC-HHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHTCCEECCCGG--
T ss_pred EeeCCcccEEEEEEecCCCcEEEEcCCCC-HHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHcCCcEEEecch--
Confidence 33344678999998533578999999964 678888999889899999999999999999999998766666665543
Q ss_pred chhHHHhhhhhhHHhhhc--ccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCc
Q psy5665 126 GTGKIKTMVNNVQSIISK--ESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRT 203 (344)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~ 203 (344)
...+.+........... .........+.+++.+.+|+..++++++|||++++++++.
T Consensus 83 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~-------------------- 141 (210)
T 2xf4_A 83 -DEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFD-------------------- 141 (210)
T ss_dssp -GHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEE--------------------
T ss_pred -HHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEe--------------------
Confidence 22222211111000000 0000122334445555555555555555555555555444
Q ss_pred cccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEeeCCCCC
Q psy5665 204 DFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHDYH 283 (344)
Q Consensus 204 ~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~ 283 (344)
++.+++|+||+++.+.++.++++.++..++.+|++++++.++++..++||||
T Consensus 142 --------------------------~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg-- 193 (210)
T 2xf4_A 142 --------------------------EQSQLLISGDVIFKGGVGRSDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHG-- 193 (210)
T ss_dssp --------------------------TTTTEEEEETSEETTEECCCCSTTCCHHHHHHHHHHHTGGGCTTCEEEESSS--
T ss_pred --------------------------CCCCEEEECCEeccCCcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEECCCC--
Confidence 4456777777777665666666778899999999778899988866999999
Q ss_pred CCccccHHHHHHcCCCCC
Q psy5665 284 GFSHSTVGEEKLYNPRLG 301 (344)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~ 301 (344)
++.+.+.+++.|++++
T Consensus 194 --~~~~~~~~~~~n~~~~ 209 (210)
T 2xf4_A 194 --PLSTLGYERLHNPFLQ 209 (210)
T ss_dssp --CCEEHHHHHHHCTTC-
T ss_pred --CcccHHHHhhhCchhc
Confidence 7899999999999985
No 7
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.97 E-value=4.3e-29 Score=221.96 Aligned_cols=194 Identities=29% Similarity=0.455 Sum_probs=138.8
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccccccccchhHH
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGTGKI 130 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~~~l 130 (344)
..+|||+|.++++++++|||||. .+.+.+.+++.+.+|++|++||.|.||+||+..|.+.+.+.++.+.....
T Consensus 10 ~~n~~yli~~~~~~~~~lID~g~--~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~----- 82 (254)
T 1xm8_A 10 KDNYAYILHDEDTGTVGVVDPSE--AEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKD----- 82 (254)
T ss_dssp TTEEEEEEECTTTCCEEEECCSS--HHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGGGG-----
T ss_pred CCeEEEEEEECCCCEEEEEeCCC--HHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHcCCeEEEchhhhh-----
Confidence 55779999986556799999994 57788899998999999999999999999999988876555555433210
Q ss_pred HhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCccccCCCC
Q psy5665 131 KTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGGS 210 (344)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~~ 210 (344)
..+ .....+.+|+.+.+|+..++++++
T Consensus 83 --~~~------------~~~~~~~~g~~~~lg~~~~~vi~t--------------------------------------- 109 (254)
T 1xm8_A 83 --RIP------------GIDMALKDGDKWMFAGHEVHVMDT--------------------------------------- 109 (254)
T ss_dssp --GST------------TEEEEECTTCEEEETTEEEEEEEC---------------------------------------
T ss_pred --cCC------------CCceeeCCCCEEEECCEEEEEEEC---------------------------------------
Confidence 000 022334445555555544555444
Q ss_pred CceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEeeCCCCCC------
Q psy5665 211 GVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHDYHG------ 284 (344)
Q Consensus 211 ~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~------ 284 (344)
||||+||++|+.+.++++|+||+++.+.+++ ++.++..++++|+ +++..++++..++||||+..
T Consensus 110 -------PGHt~g~~~~~~~~~~~lftGD~l~~~~~g~--~~~~~~~~~~~Sl-~~l~~l~~~~~v~pgHg~~~~~~~~~ 179 (254)
T 1xm8_A 110 -------PGHTKGHISLYFPGSRAIFTGDTMFSLSCGK--LFEGTPKQMLASL-QKITSLPDDTSIYCGHEYTLSNSKFA 179 (254)
T ss_dssp -------CSSSSSCEEEEEGGGTEEEEETTEETTEECC--CSSSCHHHHHHHH-HHHHTSCTTCEEEESBCCHHHHHHHH
T ss_pred -------CCCCCCcEEEEECCCCEEEEcCccccCCCCC--CCCCCHHHHHHHH-HHHHccCCCcEEEeCCcchhcchhhh
Confidence 5555555555544467888888888766665 3567899999999 68999988877999999621
Q ss_pred --------------------------CccccHHHHHHcCCCCCCCCCHHHHHHHhhhC
Q psy5665 285 --------------------------FSHSTVGEEKLYNPRLGEQISEEKFVEIMNNL 316 (344)
Q Consensus 285 --------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (344)
..+++++.+++.|++++. +..++.+.++..
T Consensus 180 ~~~~~~~~~l~~~~~~v~~~~~~g~~~~~tti~~e~~~Npfl~~--~~~~~~~~~~~~ 235 (254)
T 1xm8_A 180 LSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRS--SNTDIRRALRIP 235 (254)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCT--TCHHHHHHHTCC
T ss_pred hhcCCCcHHHHHHHHHHHHHHhCCCCcCCccHHHHhhcCCeecC--CCHHHHHHhccc
Confidence 127899999999999987 666677766643
No 8
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.96 E-value=4.8e-28 Score=208.74 Aligned_cols=199 Identities=25% Similarity=0.335 Sum_probs=140.7
Q ss_pred EEEEecCcceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheecccccccc
Q psy5665 44 RQLFDSISYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADH 123 (344)
Q Consensus 44 ~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~ 123 (344)
.++..+..+.|||+|.++ ++++|||||.. .+.+.+.+++.+.+|++|++||.|.||+||+..|.+.+.+.++++...
T Consensus 4 ~~~~~g~~~~n~~li~~~--~~~iliD~G~~-~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~~~v~~~~~~ 80 (207)
T 2zwr_A 4 FPVTLGPLQENAYLVETG--EGPVLIDPGDE-PEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLD 80 (207)
T ss_dssp EEEEETTTTEEEEEEEET--TEEEEECCCSC-HHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECGGG
T ss_pred EEEecCCcccEEEEEEeC--CcEEEEeCCCC-HHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHhCCcEEECHHH
Confidence 334445577899999986 77999999964 678888999888899999999999999999999988766667766654
Q ss_pred ccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCc
Q psy5665 124 ITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRT 203 (344)
Q Consensus 124 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~ 203 (344)
...+....... ... +. ..+. .+ .+. ..+.+ ||.
T Consensus 81 ---~~~~~~~~~~~-~~~--------------g~-------~~~~--~~--~~~---~~~~~------g~~--------- 113 (207)
T 2zwr_A 81 ---LPLYEGADLAA-RAW--------------GL-------AIPK--PP--LPV---RPLEE------GMR--------- 113 (207)
T ss_dssp ---HHHHHTHHHHH-HHT--------------TC-------CCCC--CC--SCC---EECCT------TCE---------
T ss_pred ---HHHHhCchhhh-hhc--------------CC-------CCCc--CC--CCc---eEeCC------CCE---------
Confidence 22222111100 000 00 0000 00 000 01111 111
Q ss_pred cccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEeeCCCCC
Q psy5665 204 DFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHDYH 283 (344)
Q Consensus 204 ~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~ 283 (344)
+. .++++.+||||+||++++.++.+++|+||+++.+..+.++++.++..++.+|+ ++++.++++..++||||
T Consensus 114 -i~----~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~~i~pgHg-- 185 (207)
T 2zwr_A 114 -LF----GFQVLHLPGHSPGHVAFYDPEGAQVFSGDLLFRGSVGRYDLPGADPKALFASL-KRLLSLPPETRVHPGHG-- 185 (207)
T ss_dssp -ET----TEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCSSSTTCCHHHHHHHH-HHHTTSCTTCEEEESBS--
T ss_pred -EE----EEEEEeCCCCCCCcEEEEECCCCEEEEecccCCCCcCCCCCCCCCHHHHHHHH-HHHhcCCCCCEEECCCC--
Confidence 11 57778888888888888887788999999988766666667778999999999 58999988866999999
Q ss_pred CCccccHHHHHHcCCCCCC
Q psy5665 284 GFSHSTVGEEKLYNPRLGE 302 (344)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~ 302 (344)
+..+++.+++.|++++.
T Consensus 186 --~~~~~~~e~~~n~~l~~ 202 (207)
T 2zwr_A 186 --PGTTLGLEARTNPFLTG 202 (207)
T ss_dssp --CCEEHHHHHHHCTTC--
T ss_pred --CCCcHHHHhhhChhhhh
Confidence 78899999999999974
No 9
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.96 E-value=6.3e-28 Score=214.92 Aligned_cols=189 Identities=29% Similarity=0.408 Sum_probs=139.0
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhhe-eccccccccccchhH
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYV-INTHVHADHITGTGK 129 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~-v~~~~~~d~~~~~~~ 129 (344)
..+|||+|.++ +++++|||||. .+.+.+.+++.+.+|++|++||.|.||+||+..|.+.+. +.++.+....
T Consensus 17 ~~n~~yli~~~-~~~~vlID~G~--~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~----- 88 (258)
T 2qed_A 17 QDNYIWVLTND-EGRCVIVDPGE--AAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQ----- 88 (258)
T ss_dssp TTEEEEEEECT-TSEEEEECCSC--HHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGGG-----
T ss_pred CceEEEEEEEC-CCcEEEEeCCC--cHHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCCCCEEEeccccc-----
Confidence 45789999873 47799999995 477889999889999999999999999999888877654 4444443210
Q ss_pred HHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCccccCCC
Q psy5665 130 IKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGG 209 (344)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~ 209 (344)
.+ .....+.+|+.+.+|+..++++++||||+++++++
T Consensus 89 ----~~------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~--------------------------- 125 (258)
T 2qed_A 89 ----DK------------GATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF--------------------------- 125 (258)
T ss_dssp ----GG------------TCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEE---------------------------
T ss_pred ----CC------------CCcEEeCCCCEEEECCcEEEEEECCCCCCCCeEEE---------------------------
Confidence 00 12344555666666655555555555555555554
Q ss_pred CCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEeeCCCCCC-----
Q psy5665 210 SGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHDYHG----- 284 (344)
Q Consensus 210 ~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~----- 284 (344)
.++++|+||+++.+.++++ +.++..++++|+ +++..++++++++||||+..
T Consensus 126 ---------------------~~~~lftGD~l~~~~~g~~--~~~~~~~~~~sl-~~l~~l~~~~~v~pgHg~~~~~~~f 181 (258)
T 2qed_A 126 ---------------------SRPYLFCGDTLFSGGCGRL--FEGTPSQMYQSL-MKINSLPDDTLICCAHEYTLANIKF 181 (258)
T ss_dssp ---------------------ETTEEEEETTEETTEECCC--SSSCHHHHHHHH-HHHHTSCTTCEEEESBCCHHHHHHH
T ss_pred ---------------------cCCEEEECCCCCCCCcCCC--CCCCHHHHHHHH-HHHHcCCCCeEEECCCcchhhchhH
Confidence 2468888888887777775 467899999999 68999999877999999621
Q ss_pred ---------------------------CccccHHHHHHcCCCCCCCCCHHHHHHHhhhC
Q psy5665 285 ---------------------------FSHSTVGEEKLYNPRLGEQISEEKFVEIMNNL 316 (344)
Q Consensus 285 ---------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (344)
..+++++++++.|++++. +..+|.+++...
T Consensus 182 ~~~~~p~~~~l~~~~~~v~~~~~~g~~~~~tti~~e~~~np~l~~--~~~~~~~~~~~~ 238 (258)
T 2qed_A 182 ALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRT--EDIDLINEINKE 238 (258)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCT--TCHHHHHHHHTT
T ss_pred hhhcCcccHHHHHHHHHHHHHHHcCCCCCCCcHHHHHhhCceecc--CCHHHHHHhhcc
Confidence 126889999999999987 677788877754
No 10
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.96 E-value=1.5e-27 Score=217.99 Aligned_cols=213 Identities=25% Similarity=0.389 Sum_probs=143.2
Q ss_pred ceeeeecccCCeeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHc----C-----CcccEEEecCCch
Q psy5665 30 VHILENAFSNGFLFRQLFDSISYTHTYILADKLSKECVIIDPVLEQADRDVTLINQL----G-----LTLKYVINTHVHA 100 (344)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~----~-----~~i~~Vi~TH~H~ 100 (344)
++......+..|.+.++.. ...+|||+|.++++++++|||||.. .+.+.+.+++. + .+|++|++||.|.
T Consensus 18 ~~~~~~~~~~~m~i~~i~~-~~~n~~ylI~~~~~~~~ilID~G~~-~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~ 95 (311)
T 2p18_A 18 RNYCTKTFGSAFSVTVVPT-LKDNFSYLINDHTTHTLAAVDVNAD-YKPILTYIEEHLKQQGNADVTYTFSTILSTHKHW 95 (311)
T ss_dssp CCCEEEEETTTEEEEEEEE-TTTEEEEEEEETTTTEEEEESCCSC-CHHHHHHHHHTC--------CCEEEEEEESSSSH
T ss_pred hhcccccCCCCcEEEEEec-CCCcEEEEEEeCCCCcEEEEeCCCC-hHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCc
Confidence 3333334444555555543 3557799999854578999999754 46778888877 7 7799999999999
Q ss_pred hhhcChhhhhhhh-------eeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCC
Q psy5665 101 DHITGTGKIKTMY-------VINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPG 173 (344)
Q Consensus 101 DH~gg~~~~~~~~-------~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pg 173 (344)
||+||+..|.+.+ .+.++.+... . .......+.+++.+.+|+..+++
T Consensus 96 DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~---------~------------~~~~~~~l~~g~~l~lg~~~l~v----- 149 (311)
T 2p18_A 96 DHSGGNAKLKAELEAMNSTVPVVVVGGAND---------S------------IPAVTKPVREGDRVQVGDLSVEV----- 149 (311)
T ss_dssp HHHTTHHHHHHHHHSCC--CCCEEEEEGGG---------T------------CTTCSEEECTTCEEEETTEEEEE-----
T ss_pred cccCCHHHHHHhhhhcccCCCCEEEEechh---------c------------CCCCceEeCCCCEEEECCeEEEE-----
Confidence 9999988887654 2222222110 0 00122334444555555444444
Q ss_pred CCCCceEEEeCCCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeee--cC---c-ceeEecceeeccCcc
Q psy5665 174 HTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVN--QG---E-GMAFTGDTLLIRGCG 247 (344)
Q Consensus 174 ht~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~--~~---~-~~lf~GD~l~~~~~~ 247 (344)
+.+||||+||++|+. ++ . +++|+||++|.+.++
T Consensus 150 -----------------------------------------i~tPGHT~g~i~~~~~~~~~~~~~~~lftGD~l~~~~~g 188 (311)
T 2p18_A 150 -----------------------------------------IDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTMFIAGIG 188 (311)
T ss_dssp -----------------------------------------EECCSSSTTCEEEEEECTTCGGGCEEEEEETTEETTEEC
T ss_pred -----------------------------------------EECCCCCcccEEEEEecCCcCCcCCEEEEcCccccCCcC
Confidence 445555555555554 33 4 688888888876666
Q ss_pred cccCCCCCHHHHHHHHHHHHhcC--------CCceEEeeCCCCCCC----------------------------------
Q psy5665 248 RTDFQQGDSHKLFQSVRKEIFSL--------PDHFRVYPAHDYHGF---------------------------------- 285 (344)
Q Consensus 248 ~~~~~~~~~~~~~~sl~~~l~~l--------~~~~~v~pgHg~~~~---------------------------------- 285 (344)
+. +.++..++++|+ ++|..+ +++++|+||||+...
T Consensus 189 ~~--~~~~~~~~~~Sl-~kl~~l~~~~~~~~~~~~~v~pgHg~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~v~~~~~~g 265 (311)
T 2p18_A 189 AF--FEGDEKDMCRAM-EKVYHIHKGNDYALDKVTFIFPGHEYTSGFMTFSEKTFPDRASDDLAFIQAQRAKYAAAVKTG 265 (311)
T ss_dssp CC--TTSCHHHHHHHH-HHHHTTTGGGTTGGGGGEEEEESBCCHHHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CC--CCCCHHHHHHHH-HHHHHhhhcccccCCCCeEEEeCCCchhhhhHHHHHhCCCccchhhHHHHHHHHHHHHHHHcC
Confidence 63 567899999999 589999 777779999995421
Q ss_pred -c--cccHHHHHHcCCCCCCCCCHHHHHHHhhhC
Q psy5665 286 -S--HSTVGEEKLYNPRLGEQISEEKFVEIMNNL 316 (344)
Q Consensus 286 -~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (344)
+ +++++++++.|+|++. +..+|++.+...
T Consensus 266 ~~t~psti~~E~~~npfl~~--~~~~~~~~~~~~ 297 (311)
T 2p18_A 266 DPSVPSSLAEEKRQNLFLRV--ADPAFVAKMNQG 297 (311)
T ss_dssp CCCCCEEHHHHHHHCTTGGG--GSHHHHHHHTSS
T ss_pred CCCCCccHHHHhhcCccccC--CCHHHHHHhcCC
Confidence 1 4789999999999987 788898888754
No 11
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.93 E-value=1.8e-24 Score=198.24 Aligned_cols=182 Identities=20% Similarity=0.331 Sum_probs=113.7
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCCh---HHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhhhheeccccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQA---DRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKTMYVINTHVHADHI 124 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~---~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~ 124 (344)
..+|||+|.++ ++++|||||.+.. +.+.+.+++.|.+ |++|++||.|.||+||+..|.+. .+.++++....
T Consensus 20 ~~~n~~li~~~--~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~-~~~v~~~~~~~ 96 (317)
T 2zo4_A 20 KTVNLYLLQGA--GEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL-GARVFLHEEEF 96 (317)
T ss_dssp CEEEEEEEEET--TEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT-TCEEEEEGGGT
T ss_pred CcEEEEEEEcC--CceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC-CCEEEEcHHHH
Confidence 56899999985 6799999997632 3466788888764 99999999999999999999876 66666665442
Q ss_pred cchhHHHhhhhh----hHHhhhcc---------------------cccccceEccCCCeeEeCCeeEEEEeCCCCCCCce
Q psy5665 125 TGTGKIKTMVNN----VQSIISKE---------------------SGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCV 179 (344)
Q Consensus 125 ~~~~~l~~~~~~----~~~~~~~~---------------------~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~ 179 (344)
............ ........ ........+.+++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~------------------- 157 (317)
T 2zo4_A 97 ARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALE------------------- 157 (317)
T ss_dssp TTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEE-------------------
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEE-------------------
Confidence 211111100000 00000000 0001122233333333
Q ss_pred EEEeCCCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccC----CCCC
Q psy5665 180 TYVNQGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDF----QQGD 255 (344)
Q Consensus 180 ~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~----~~~~ 255 (344)
+++..++++.|||||+||++++.++.+++|+||+++.+.+++... ...+
T Consensus 158 ---------------------------~gg~~~~~i~tpGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~ 210 (317)
T 2zo4_A 158 ---------------------------VAGKRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENP 210 (317)
T ss_dssp ---------------------------ETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSCCSSSCCCCCCCTTSCSCH
T ss_pred ---------------------------eCCceEEEEECCCCCcccEEEEeCCCCEEEECCEecCCCCCCCcccCCCCCch
Confidence 344555666666666666666666567777777776544433221 1246
Q ss_pred HHHHHHHHHHHHhcCCCceEEeeCCCCC
Q psy5665 256 SHKLFQSVRKEIFSLPDHFRVYPAHDYH 283 (344)
Q Consensus 256 ~~~~~~sl~~~l~~l~~~~~v~pgHg~~ 283 (344)
..+|.+|+ ++++.++++. ++||||..
T Consensus 211 ~~~~~~sl-~~l~~l~~~~-v~pgHg~~ 236 (317)
T 2zo4_A 211 LKDFLRSL-DRLADLGARV-AYAGHFGP 236 (317)
T ss_dssp HHHHHHHH-HHHHTSCCSE-EEESSSSC
T ss_pred HHHHHHHH-HHHhcCCCCE-EECCCCCc
Confidence 78889999 6999998877 99999954
No 12
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.93 E-value=3.1e-25 Score=198.99 Aligned_cols=193 Identities=17% Similarity=0.183 Sum_probs=122.0
Q ss_pred eeecccCCeeEEEEEe-----cCcceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHH-cCCcccEEEecCCchhhhc
Q psy5665 33 LENAFSNGFLFRQLFD-----SISYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQ-LGLTLKYVINTHVHADHIT 104 (344)
Q Consensus 33 ~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~-~~~~i~~Vi~TH~H~DH~g 104 (344)
...++.++.|...-+. +...+|||+|.++ ++++|||||.+ ..+++++++++ .+++|++||+||.|.||+|
T Consensus 50 ~~~~~~~~v~~~~~~~~~~~~G~~~~N~ylv~~~--~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~g 127 (270)
T 4eyb_A 50 VFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDG--GRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMG 127 (270)
T ss_dssp EEEEEETTEEEEEEEEEETTTEEEEEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHT
T ss_pred eEEEecCCeEEEEeecccCCCCccceEEEEEEEC--CEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcC
Confidence 3456677766443322 1224799999986 78999999964 34677888876 4889999999999999999
Q ss_pred ChhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC
Q psy5665 105 GTGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ 184 (344)
Q Consensus 105 g~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~ 184 (344)
|+..|++. .+.++++... ...+.. ........ ....+
T Consensus 128 g~~~l~~~-~~~v~~~~~~---~~~~~~-----------~~~~~~~~----------------~~~~~------------ 164 (270)
T 4eyb_A 128 GMDALHAA-GIATYANALS---NQLAPQ-----------EGMVAAQH----------------SLTFA------------ 164 (270)
T ss_dssp THHHHHHT-TCEEEEEHHH---HHHGGG-----------GTCCCCSE----------------EECBC------------
T ss_pred cHHHHHHC-CCeEEECHHH---HHHHHh-----------cCcccccc----------------ccCCC------------
Confidence 99999875 4444444322 111100 00000000 00000
Q ss_pred CCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCccccc-CCCCCHHHHHHHH
Q psy5665 185 GEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTD-FQQGDSHKLFQSV 263 (344)
Q Consensus 185 ~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~-~~~~~~~~~~~sl 263 (344)
....+-.++ .+..++ ...++.+|||||||+++|.+++++||+||++|.+..+... .++++..+|++|+
T Consensus 165 ~~~~~~~~~----------~~~~g~-~~~~~~~pgHT~g~~~~~~~~~~vLfsGD~l~~~~~~~~~~~~~~~~~~~~~Sl 233 (270)
T 4eyb_A 165 ANGWVEPAT----------APNFGP-LKVFYPGPGHTSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASA 233 (270)
T ss_dssp TTSBBCGGG----------STTCTT-EEEECCCSSSSSSCCEEEETTSSEEECTTTCCCTTCSCCCCCTTCCTTTHHHHH
T ss_pred CceeecCce----------eeecCc-eeEEecccccCCCCEEEEecCCcEEEEeCeecCCCCCCcCCCCCCCHHHHHHHH
Confidence 000000011 111122 2234567999999999999999999999999887777653 3567889999999
Q ss_pred HHHHhc-CCCceEEeeCCCC
Q psy5665 264 RKEIFS-LPDHFRVYPAHDY 282 (344)
Q Consensus 264 ~~~l~~-l~~~~~v~pgHg~ 282 (344)
+ +++. +++..+|+||||+
T Consensus 234 ~-~l~~~~~d~~~v~PGHG~ 252 (270)
T 4eyb_A 234 R-AFGAAFPKASMIVMSHSA 252 (270)
T ss_dssp H-HHHHHSTTCCEEECSSSC
T ss_pred H-HHHhhCCCCcEEEcCCCC
Confidence 5 5554 4444459999994
No 13
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.92 E-value=1.5e-24 Score=193.62 Aligned_cols=199 Identities=19% Similarity=0.231 Sum_probs=121.1
Q ss_pred cCcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhhhheeccccccccc
Q psy5665 49 SISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKTMYVINTHVHADHI 124 (344)
Q Consensus 49 ~~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~ 124 (344)
+....|||+|.++ ++++|||||.+ ..+.+.+.+++.+.+ |++|++||.|.||+||+..|.+.+.+.++++...
T Consensus 21 ~~~~~n~~li~~~--~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~- 97 (263)
T 1k07_A 21 GTDDLASYLIVTP--RGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDED- 97 (263)
T ss_dssp CBSSBCCEEEEET--TEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEEEHHH-
T ss_pred CCCCeEEEEEEeC--CceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhcCCEEEEcHHH-
Confidence 4467899999986 67999999964 457788899998875 9999999999999999999988766666665433
Q ss_pred cchhHHHhhhhhhHHhhh----cccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccC
Q psy5665 125 TGTGKIKTMVNNVQSIIS----KESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGC 200 (344)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~ 200 (344)
...+.........+.. ..........+.+++.+.+|+..++++++|||++++++++++..
T Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~~~~~~~~~-------------- 161 (263)
T 1k07_A 98 --VSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLK-------------- 161 (263)
T ss_dssp --HHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEE--------------
T ss_pred --HHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCCCcEEEEEecc--------------
Confidence 1111111000000000 00011123344455555555555555555555555555544320
Q ss_pred CCccccCCCCCceeecCCCCCCCceeeeecCc---ceeEecceeeccCcccc--cCCCCCHHHHHHHHHHHHhcCCCceE
Q psy5665 201 GRTDFQQGGSGVPVRATPGHTDGCVTYVNQGE---GMAFTGDTLLIRGCGRT--DFQQGDSHKLFQSVRKEIFSLPDHFR 275 (344)
Q Consensus 201 ~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~---~~lf~GD~l~~~~~~~~--~~~~~~~~~~~~sl~~~l~~l~~~~~ 275 (344)
... +++|+||+......... .....+..++.+|+ ++++.++.++
T Consensus 162 -----------------------------~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~- 210 (263)
T 1k07_A 162 -----------------------------DHGKQYQAVIIGSIGVNPGYKLVDNITYPKIAEDYKHSI-KVLESMRCDI- 210 (263)
T ss_dssp -----------------------------ETTEEEEEEEECCCCCCTTCCCSSCSSCTTHHHHHHHHH-HHHHTBCCSE-
T ss_pred -----------------------------cCCceeEEEEECCcccCCCccccCCCcCcccHHHHHHHH-HHHHccCCCE-
Confidence 001 46666665431110000 01234678888999 6899999998
Q ss_pred EeeCCCCCCCccccHHHHH------HcCCCCC
Q psy5665 276 VYPAHDYHGFSHSTVGEEK------LYNPRLG 301 (344)
Q Consensus 276 v~pgHg~~~~~~~~~~~~~------~~~~~l~ 301 (344)
++|||| +..+..++. +.|++++
T Consensus 211 i~pgHg----~~~~~~~~~~~~~~~~~np~~~ 238 (263)
T 1k07_A 211 FLGSHA----GMFDLKNKYVLLSKGQNNPFVD 238 (263)
T ss_dssp EEESBH----HHHTHHHHHHHHHTTCSCTTBC
T ss_pred EEcCCC----cccchHHHHHhcccCCCCCCcC
Confidence 899999 677766643 5677776
No 14
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.92 E-value=3.6e-24 Score=194.11 Aligned_cols=195 Identities=17% Similarity=0.254 Sum_probs=125.8
Q ss_pred ecCcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhhhheecccccccc
Q psy5665 48 DSISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKTMYVINTHVHADH 123 (344)
Q Consensus 48 ~~~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~ 123 (344)
.+..+.|||+|.++ ++++|||||.+ ..+.+.+.+++.+++ |++|++||.|.||+||+..|.+...+.++.+...
T Consensus 50 ~~~~~~n~~li~~~--~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~ 127 (294)
T 3m8t_A 50 VGTDGIAVYVIKTS--QGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERD 127 (294)
T ss_dssp CCCSSSCCEEEEET--TEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHHCCEEEEEGGG
T ss_pred eCCCCeEEEEEEEC--CceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhccCCEEEEChHH
Confidence 35667899999986 67999999964 457788899998875 9999999999999999999988776777766554
Q ss_pred ccchhHHHhhhh-hhH-HhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCC-ceeeecceeeeccC
Q psy5665 124 ITGTGKIKTMVN-NVQ-SIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGE-GMAFTGDTLLIRGC 200 (344)
Q Consensus 124 ~~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~-~iL~~GD~~~~~~~ 200 (344)
...+..... ... ..............+.+++.+.+|+..++++++|||++++++++++.. + .+
T Consensus 128 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~-~~---------- 193 (294)
T 3m8t_A 128 ---KPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDG-KE---------- 193 (294)
T ss_dssp ---HHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEET-TE----------
T ss_pred ---HHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCccCEEEEEEccCC-Cc----------
Confidence 222221110 000 000001112234556667777777777777777777777776665421 0 00
Q ss_pred CCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCc--ccccCCCCCHHHHHHHHHHHHhcCCCceEEee
Q psy5665 201 GRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGC--GRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYP 278 (344)
Q Consensus 201 ~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~--~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~p 278 (344)
..+++|+||.++.+.. +...++ .+..++.+++ ++++.+++++ ++|
T Consensus 194 ------------------------------~~~~lf~GD~~~~~~~~~~~~~~~-~~~~~~~~sl-~~l~~l~~~~-v~p 240 (294)
T 3m8t_A 194 ------------------------------DREVLFFCSGTVALNRLVGQPTYA-GIVDDYRATF-AKAKAMKIDV-LLG 240 (294)
T ss_dssp ------------------------------EEEEEECCCCCCTTCCCSSSCSST-THHHHHHHHH-HHHHHSCCSE-EEC
T ss_pred ------------------------------cceEEEEcCccCCCCcCcCCCCCC-chHHHHHHHH-HHHHCCCCCE-EEc
Confidence 0136666666533211 122222 3467888898 7999999998 999
Q ss_pred CCCCCCCccccHHHHHH
Q psy5665 279 AHDYHGFSHSTVGEEKL 295 (344)
Q Consensus 279 gHg~~~~~~~~~~~~~~ 295 (344)
||| +..+..+++.
T Consensus 241 gHg----~~~~~~~~~~ 253 (294)
T 3m8t_A 241 PHP----EVYGMQAKRA 253 (294)
T ss_dssp SSG----GGTTHHHHHH
T ss_pred CCC----ChhchHHHHH
Confidence 999 6666655443
No 15
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.92 E-value=8.1e-24 Score=184.50 Aligned_cols=180 Identities=19% Similarity=0.217 Sum_probs=119.2
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHc-CCcccEEEecCCchhhhcChhhhhhhheeccccccccccch
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQL-GLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGT 127 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~ 127 (344)
...|||+|.++ ++++|||||.+ ..+.+.+.+++. ..+|++|++||.|.||+||+..|.+ ..+.++++... .
T Consensus 21 ~~~n~~li~~~--~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-~~~~v~~~~~~---~ 94 (227)
T 3iog_A 21 VQENSMVYFGA--KGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS-IGAKVVSTRQT---R 94 (227)
T ss_dssp SCEEEEEEECS--SCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH-TTCEEEEEHHH---H
T ss_pred ccCcEEEEEeC--CeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh-CCCeEEECHHH---H
Confidence 57899999975 67999999964 346777888875 4679999999999999999999986 55666666544 2
Q ss_pred hHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCccccC
Q psy5665 128 GKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQ 207 (344)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~ 207 (344)
..+.........+..... . . +.. .+--.+. .++.+ .+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~---~-------~---~~~-------~~~~~~~----------~~~~~-----------~~~l 133 (227)
T 3iog_A 95 DLMKSDWAEIVAFTRKGL---P-------E---YPD-------LPLVLPN----------VVHDG-----------DFTL 133 (227)
T ss_dssp HHHHHHHHHHHHHHHHHC---T-------T---SCC-------CCCCCCS----------EEESS-----------CEEE
T ss_pred HHHHHhhHHHHHHhhcCC---C-------C---CCC-------ccccCCC----------EeecC-----------eEEE
Confidence 222221111100000000 0 0 000 0000000 00101 1344
Q ss_pred CCCCceeecC-CCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHh--cCCCceEEeeCCCC
Q psy5665 208 GGSGVPVRAT-PGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIF--SLPDHFRVYPAHDY 282 (344)
Q Consensus 208 ~~~~~~~~~~-pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~--~l~~~~~v~pgHg~ 282 (344)
++..++++.+ |||||||++++.++++++| ||.++.+..++. ...+..+|.+++ ++|+ .+++++ ++||||.
T Consensus 134 ~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf-gd~l~~~~~~~~--~~~~~~~~~~sl-~~l~~~~l~~~~-i~pgHg~ 206 (227)
T 3iog_A 134 QEGKVRAFYAGPAHTPDGIFVYFPDEQVLY-GGCILKEKLGNL--SFADVKAYPQTL-ERLKAMKLPIKT-VIGGHDS 206 (227)
T ss_dssp TTTTEEEECCCCSSSSSCCEEEETTTTEEE-CGGGSCSSCCCC--TTCCTTHHHHHH-HHHHHTCCCCSE-EECSSSC
T ss_pred cCcEEEEEecCCCCCCCcEEEEecCCCEEE-cccccccCCCCc--CcCCHHHHHHHH-HHHHhccCCCCE-EEeCCCC
Confidence 5567888886 9999999999998889999 888887766665 346788999999 5777 678886 9999994
No 16
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.92 E-value=1.8e-24 Score=190.93 Aligned_cols=192 Identities=18% Similarity=0.205 Sum_probs=124.1
Q ss_pred eeeecccCCeeEEEE-Ee----cCcceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHc-CCcccEEEecCCchhhh
Q psy5665 32 ILENAFSNGFLFRQL-FD----SISYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQL-GLTLKYVINTHVHADHI 103 (344)
Q Consensus 32 ~~~~~~~~~~~~~~~-~~----~~~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~ 103 (344)
+...++.++.|...- .. +..++|||+|.++ ++++|||||.. ..+.+.+.+++. +.+|++|++||.|.||+
T Consensus 22 ~~~~~i~~~v~~~~~~~~~~~~g~~~~n~~li~~~--~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~ 99 (243)
T 4hl2_A 22 LVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDG--GRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKM 99 (243)
T ss_dssp EEEEEEETTEEEEEEEEEETTTEEEEEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHH
T ss_pred eEEEEeCCceEEEeeecccCCCCcccceEEEEEEC--CcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCcccc
Confidence 334455666664432 21 2356899999986 77999999953 357788889887 88999999999999999
Q ss_pred cChhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEe
Q psy5665 104 TGTGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVN 183 (344)
Q Consensus 104 gg~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~ 183 (344)
||+..|.+. .+.++++... ...+.... ..... . .+. .
T Consensus 100 gg~~~l~~~-~~~v~~~~~~---~~~~~~~~-----------~~~~~--------~--------~~~------------~ 136 (243)
T 4hl2_A 100 GGMDALHAA-GIATYANALS---NQLAPQEG-----------MVAAQ--------H--------SLT------------F 136 (243)
T ss_dssp TTHHHHHHT-TCEEEEEHHH---HHHGGGTT-----------CCCCS--------E--------EEC------------B
T ss_pred CCHHHHHhC-CCeEEECHHH---HHHHhccc-----------ccccc--------c--------ccc------------c
Confidence 999999874 4445544332 11111000 00000 0 000 0
Q ss_pred CCCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceee---ccCcccccCCCCCHHHHH
Q psy5665 184 QGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLL---IRGCGRTDFQQGDSHKLF 260 (344)
Q Consensus 184 ~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~---~~~~~~~~~~~~~~~~~~ 260 (344)
+....+-.|| .+.+++..+ ++.+||||+||++++.++++++|+||+++ .+.++++ +.++..++.
T Consensus 137 ~~~~~~~~g~----------~~~~g~~~v-~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~--~~~d~~~~~ 203 (243)
T 4hl2_A 137 AANGWVEPAT----------APNFGPLKV-FYPGPGHTSDNITVGIDGTDIAFGGCLIKDSKAKSLGNL--GDADTEHYA 203 (243)
T ss_dssp CTTSBBCGGG----------STTCTTEEE-ECCCSSSSTTCCEEEETTTTEEECTTTCCCTTCSCCCCC--TTCCTTTHH
T ss_pred ccceEecCCC----------eEEECCEEE-EeCCCCCCcCCEEEEEcCCCEEEEcceeeeccCCCcCCC--CCCCHHHHH
Confidence 0111111222 255566556 56788999999999888888999999888 3444444 567888999
Q ss_pred HHHHHHHh-cCCCceEEeeCCCC
Q psy5665 261 QSVRKEIF-SLPDHFRVYPAHDY 282 (344)
Q Consensus 261 ~sl~~~l~-~l~~~~~v~pgHg~ 282 (344)
++++ ++. .++....++||||+
T Consensus 204 ~sl~-~l~~~l~~~~~v~pgHg~ 225 (243)
T 4hl2_A 204 ASAR-AFGAAFPKASMIVMSHSA 225 (243)
T ss_dssp HHHH-HHHHHSTTCCEEECSSSC
T ss_pred HHHH-HHHhhCCCceEEEeCCCC
Confidence 9995 555 56555569999994
No 17
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.91 E-value=7.1e-24 Score=183.97 Aligned_cols=182 Identities=18% Similarity=0.173 Sum_probs=117.7
Q ss_pred ccCCeeEEEEEe----cCcceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHH-cCCcccEEEecCCchhhhcChhhh
Q psy5665 37 FSNGFLFRQLFD----SISYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQ-LGLTLKYVINTHVHADHITGTGKI 109 (344)
Q Consensus 37 ~~~~~~~~~~~~----~~~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~-~~~~i~~Vi~TH~H~DH~gg~~~~ 109 (344)
+.++.|...... ....+|||+|.++ ++++|||||.. ..+.+.+.+++ .+.+|++|++||.|.||+||+..|
T Consensus 11 l~~~v~~~~~~~~~~~~~~~~n~~li~~~--~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l 88 (219)
T 3l6n_A 11 IKNNLHIYKTFGVFGGKEYSANSMYLVTK--KGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFF 88 (219)
T ss_dssp BTTTEEEEEEEEEETTEEEEEEEEEEEET--TEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHH
T ss_pred ecCCEEEEEeccccCCccccceEEEEEeC--CEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHH
Confidence 555555444332 2345799999985 78999999964 35677788886 478899999999999999999999
Q ss_pred hhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEe-CCCCCCCceEEEeCCCce
Q psy5665 110 KTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRA-TPGHTDGCVTYVNQGEGM 188 (344)
Q Consensus 110 ~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~pght~~~~~~~~~~~~i 188 (344)
.+ +.+.++++... ...+... ........+.+++.+.+|+..+++++ +|||+++++++++++
T Consensus 89 ~~-~~~~v~~~~~~---~~~~~~~-----------~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~~--- 150 (219)
T 3l6n_A 89 NN-KGIKTYATAKT---NEFLKKD-----------GKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFPK--- 150 (219)
T ss_dssp HH-TTCEEEECHHH---HHHHHHT-----------TCCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEETT---
T ss_pred Hh-CCCEEEEcHHH---HHHHHhc-----------CCCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEECC---
Confidence 85 34555555432 1111111 11223455666677777776666666 566666666666655
Q ss_pred eeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCccc-ccCCCCCHHHHHHHHHHHH
Q psy5665 189 AFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGR-TDFQQGDSHKLFQSVRKEI 267 (344)
Q Consensus 189 L~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~-~~~~~~~~~~~~~sl~~~l 267 (344)
.+++|+||+++...... ..++.++..++.++++ ++
T Consensus 151 -------------------------------------------~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~-~l 186 (219)
T 3l6n_A 151 -------------------------------------------YNVLDGGCLVKSNSATDLGYIKEANVEQWPKTIN-KL 186 (219)
T ss_dssp -------------------------------------------TTEEEEETTSCCTTCSSCCCCTTCCTTTHHHHHH-HH
T ss_pred -------------------------------------------CCEEEECCeeeccccccccccCccCHHHHHHHHH-HH
Confidence 45566666554321111 1135677888999995 66
Q ss_pred hc-CCCceEEeeCCCC
Q psy5665 268 FS-LPDHFRVYPAHDY 282 (344)
Q Consensus 268 ~~-l~~~~~v~pgHg~ 282 (344)
.. ++...+++||||+
T Consensus 187 ~~~~~~~~~v~pgHg~ 202 (219)
T 3l6n_A 187 KAKYSKATLIIPGHDE 202 (219)
T ss_dssp HHHCTTCSEEEESBSC
T ss_pred HHhCCCCCEEECCCCC
Confidence 55 6544559999993
No 18
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.91 E-value=7.7e-24 Score=185.59 Aligned_cols=183 Identities=15% Similarity=0.185 Sum_probs=111.2
Q ss_pred eecccCCeeEEEEEec-----CcceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHc-CCcccEEEecCCchhhhcC
Q psy5665 34 ENAFSNGFLFRQLFDS-----ISYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQL-GLTLKYVINTHVHADHITG 105 (344)
Q Consensus 34 ~~~~~~~~~~~~~~~~-----~~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg 105 (344)
..++.++.|....... ...+|||+|.++ ++++|||||.+ ..+.+.+.+++. +.+|++|++||.|.||+||
T Consensus 13 ~~~i~~~v~~i~~~~~~~~~g~~~~n~~li~~~--~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg 90 (232)
T 1a7t_A 13 ITQLSDKVYTYVSLAEIEGWGMVPSNGMIVINN--HQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGG 90 (232)
T ss_dssp EEECSSSEEEEEEEEEETTTEEEEEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTT
T ss_pred EEEecCCeEEEEeccCCCCCccccceEEEEEeC--CEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCC
Confidence 3456666554443321 124799999985 77999999965 346678888877 6789999999999999999
Q ss_pred hhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCC
Q psy5665 106 TGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQG 185 (344)
Q Consensus 106 ~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~ 185 (344)
+..|.+ ..+.++++... ...+... ....+...+.+++.+.+|+..+++++
T Consensus 91 ~~~~~~-~~~~v~~~~~~---~~~~~~~-----------~~~~~~~~~~~g~~~~~g~~~i~~~~--------------- 140 (232)
T 1a7t_A 91 LGYLQR-KGVQSYANQMT---IDLAKEK-----------GLPVPEHGFTDSLTVSLDGMPLQCYY--------------- 140 (232)
T ss_dssp HHHHHH-TTCEEEEEHHH---HHHHHHH-----------TCCCCSEEESSEEEEEETTEEEEEEC---------------
T ss_pred HHHHHh-CCCeEEEcHHH---HHHHHhc-----------CCCCCceecCCCCEEEECCeEEEEEe---------------
Confidence 999886 33444444322 1111110 00112233444444555554455443
Q ss_pred CceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeecc---CcccccCCCCCHHHHHHH
Q psy5665 186 EGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIR---GCGRTDFQQGDSHKLFQS 262 (344)
Q Consensus 186 ~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~---~~~~~~~~~~~~~~~~~s 262 (344)
.+||||+||++++.++.+++|+||+++.. .++.. +.++..++.+|
T Consensus 141 ------------------------------~~pgHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~--~~~~~~~~~~s 188 (232)
T 1a7t_A 141 ------------------------------LGGGHATDNIVVWLPTENILFGGCMLKDNQTTSIGNI--SDADVTAWPKT 188 (232)
T ss_dssp ------------------------------CCCSSSTTCCEEEETTTTEEEEETTSCCTTCCSCCCC--TTCCTTTHHHH
T ss_pred ------------------------------CCCCCCCCCEEEEECCCCEEEEcCcccccCCcccccC--CCCCHHHHHHH
Confidence 14455555555554445666677766532 22222 45677888999
Q ss_pred HHHHHhcC--CCceEEeeCCCC
Q psy5665 263 VRKEIFSL--PDHFRVYPAHDY 282 (344)
Q Consensus 263 l~~~l~~l--~~~~~v~pgHg~ 282 (344)
+ ++++.+ +.+. ++||||+
T Consensus 189 l-~~l~~~~~~~~~-v~pgHg~ 208 (232)
T 1a7t_A 189 L-DKVKAKFPSARY-VVPGHGN 208 (232)
T ss_dssp H-HHHHHHCTTCSE-EEESSSC
T ss_pred H-HHHHhhCCCCCE-EECCCCC
Confidence 9 566654 4554 9999994
No 19
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.91 E-value=4.5e-23 Score=179.58 Aligned_cols=169 Identities=18% Similarity=0.119 Sum_probs=105.9
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHc-CCcccEEEecCCchhhhcChhhhhhhheeccccccccccch
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQL-GLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGT 127 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~ 127 (344)
...|||+|.++ ++++|||||.+ ..+.+.+.+++. +.+|++|++||.|.||+||+..|.+ ..+.++++... .
T Consensus 25 ~~~n~~li~~~--~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~-~~~~v~~~~~~---~ 98 (223)
T 1m2x_A 25 YAANAVYLVTD--KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK-IGAKTYSTKMT---D 98 (223)
T ss_dssp EEEEEEEEEET--TEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH-TTCEEEEEHHH---H
T ss_pred ccccEEEEEeC--CEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh-CCCeEEEcHHH---H
Confidence 45899999985 78999999964 456788888887 8899999999999999999999886 33444444322 1
Q ss_pred hHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEe-CCCCCCCceEEEeCCCceeeecceeeeccCCCcccc
Q psy5665 128 GKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRA-TPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQ 206 (344)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~ 206 (344)
..+... ....+...+.+++.+.+|+..+++++ +|||+++++++++
T Consensus 99 ~~~~~~-----------~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~----------------------- 144 (223)
T 1m2x_A 99 SILAKE-----------NKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWF----------------------- 144 (223)
T ss_dssp HHHHHT-----------TCCCCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEE-----------------------
T ss_pred HHHHhc-----------CccCCceecCCCceEEECCEEEEEEecCCCCCCCCEEEEE-----------------------
Confidence 111110 00112233444555555555555553 4555555555544
Q ss_pred CCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCccc-ccCCCCCHHHHHHHHHHHHhcC-CCceEEeeCCCCC
Q psy5665 207 QGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGR-TDFQQGDSHKLFQSVRKEIFSL-PDHFRVYPAHDYH 283 (344)
Q Consensus 207 ~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~-~~~~~~~~~~~~~sl~~~l~~l-~~~~~v~pgHg~~ 283 (344)
++.+++|+||.++....+. ..++..+..++.+|+ ++++.+ ++...++||||+.
T Consensus 145 -----------------------~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~~~~~~~~i~pgHg~~ 199 (223)
T 1m2x_A 145 -----------------------PKEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSV-HNIQQKFSGAQYVVAGHDDW 199 (223)
T ss_dssp -----------------------TTTTEEEEETTSCCTTCSSCCCCTTCCHHHHHHHH-HHHHHHTTTCSEEEESBSCC
T ss_pred -----------------------CCCCEEEEecccccCcccccccCCCCCHHHHHHHH-HHHHHhCCCCCEEEeCCCCc
Confidence 4455666666544321111 113457889999999 466654 3333499999943
No 20
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.91 E-value=2.1e-23 Score=186.25 Aligned_cols=196 Identities=13% Similarity=0.157 Sum_probs=132.8
Q ss_pred eeeecccCCeeEEEEEe-------------cCcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHc-C-CcccEEEe
Q psy5665 32 ILENAFSNGFLFRQLFD-------------SISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQL-G-LTLKYVIN 95 (344)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~-~-~~i~~Vi~ 95 (344)
....++.+++|...... .+...|||+|.+ ++++|||||.+ ..+.+++.+++. + .+|++|++
T Consensus 9 ~~~~~i~~~vy~v~~~~~~~~~f~~~~~~~~g~~~N~yli~~---~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~Iil 85 (262)
T 3hnn_A 9 VQVLPIATNTKVLRARSWSRLRFEIEYALERGTTSNSYVIEG---DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVIL 85 (262)
T ss_dssp EEEEEEETTEEEEEEEESSCSSSSGGGTTCCCEEEEEEEEES---SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEEC
T ss_pred ceeEeecCCeEEEEEeeCCccceeeeeccCCCcEEEEEEEEC---CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEE
Confidence 33445666666554332 234669999986 45999999964 246677777765 3 46999999
Q ss_pred cCCchhhhcChhhhhhhh-eeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeC-CeeEEEEeCCC
Q psy5665 96 THVHADHITGTGKIKTMY-VINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFG-DQQLEVRATPG 173 (344)
Q Consensus 96 TH~H~DH~gg~~~~~~~~-~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~~~~~pg 173 (344)
||.|.||+||+..+.+.+ .+.++++... ...+...++ . .......+.+++.+++| +..++++.+||
T Consensus 86 TH~H~DH~gg~~~l~~~~~~~~v~~~~~~---~~~l~~~~~-------~--~~~~~~~~~~g~~l~lg~~~~~~~i~tpg 153 (262)
T 3hnn_A 86 GHFSPNRIPTFKALLELAPQITFVCSLPA---AGDLRAAFP-------D--DNLNILPMRGKETLDLGKGHVLKFLPIPS 153 (262)
T ss_dssp SSCCGGGHHHHHHHHHHCTTCEEEECHHH---HHHHHHHSS-------S--SCCEEEECCSSCEEECSTTCEEEEEECCC
T ss_pred CCCCcchhchHHHHHHHCCCCEEEECHHH---HHHHHHHhC-------C--CCCceEEeCCCCEEEcCCCcEEEEEECCC
Confidence 999999999999998875 5666655443 222222111 0 12245667889999998 89999999999
Q ss_pred -CCCCceEEEeCCCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccc---
Q psy5665 174 -HTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRT--- 249 (344)
Q Consensus 174 -ht~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~--- 249 (344)
|++++++++.++.++||+||++.... ..+.+|....+..
T Consensus 154 ~Ht~g~~~~~~~~~~~lfsGD~~~~~~-------------------------------------~~~~~~~~~~~~~~~~ 196 (262)
T 3hnn_A 154 PRWPAGLCTYDVQTQILYTDKIFGAHI-------------------------------------CGDDVFDDNWESFKED 196 (262)
T ss_dssp SSCTTCEEEEETTTTEEEEETTTCCCC-------------------------------------CCSCCEESCGGGTHHH
T ss_pred CCCCCeeEEEeCCCCEEEEeecCcccc-------------------------------------CchhcccccHHHHHHH
Confidence 99999999998888888888732111 1111222111111
Q ss_pred ------cCCCCCHHHHHHHHHHHHhcCCCceEEeeCCC
Q psy5665 250 ------DFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHD 281 (344)
Q Consensus 250 ------~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg 281 (344)
.+.+++..++.+++ ++++.++.+. |+||||
T Consensus 197 ~~~~~~~~~~~~~~~~~~sl-~~l~~L~~~~-i~PgHG 232 (262)
T 3hnn_A 197 QRYYFNCLMAPHAIHVEAAL-EKISDLQVRL-YAVGHG 232 (262)
T ss_dssp HHHHHHHHTGGGHHHHHHHH-HHHTTSCCSE-EEESSS
T ss_pred HHHHHHHHhhhhHHHHHHHH-HHHhCCCCCE-EECCCC
Confidence 12234457788888 6999999987 999999
No 21
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.90 E-value=2.8e-23 Score=183.47 Aligned_cols=193 Identities=15% Similarity=0.152 Sum_probs=113.3
Q ss_pred ecccCCeeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHc-CCcccEEEecCCchhhhcChhhhhh
Q psy5665 35 NAFSNGFLFRQLFDSISYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQL-GLTLKYVINTHVHADHITGTGKIKT 111 (344)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg~~~~~~ 111 (344)
.++.++.|..... ...+.|||+|.++ +++++|||||.. ..+.+.+.+++. +.+..+|++||.|.||+||+..|.+
T Consensus 13 ~~i~~~v~~i~~~-~~~~~n~~li~~~-~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~ 90 (246)
T 2fhx_A 13 TKIDSDVFVVTDR-DFYSSNVLVAKML-DGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK 90 (246)
T ss_dssp EEEETTEEEEEET-TTTTEEEEEEECT-TSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH
T ss_pred EEecCCEEEEECc-CCCCCCEEEEEeC-CCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhh
Confidence 3455554443332 2246799999864 246999999965 246677788775 6555589999999999999999986
Q ss_pred hheeccccccccccchhHHHhhhhh-------------hHHhhhcccccccce--EccCCCeeEeCCeeEEEEeCCCCCC
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNN-------------VQSIISKESGAQADI--HVTHGDTIDFGDQQLEVRATPGHTD 176 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~i~~~~~pght~ 176 (344)
+.+.++++.... ..+...... ............++. .+.+++.+++|+..++++.
T Consensus 91 -~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~------ 160 (246)
T 2fhx_A 91 -MGAETWSSDLTK---QLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSF------ 160 (246)
T ss_dssp -TTCEEEEEHHHH---HHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEEC------
T ss_pred -cCCEEEEcHHHH---HHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEe------
Confidence 355566655432 111111000 000000000001111 2344455555555555543
Q ss_pred CceEEEeCCCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCH
Q psy5665 177 GCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDS 256 (344)
Q Consensus 177 ~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~ 256 (344)
.+||||+||++++.++.+++|+||+++.+..+. ++..+.
T Consensus 161 ---------------------------------------~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~--~~~~~~ 199 (246)
T 2fhx_A 161 ---------------------------------------PGPAHSPDNVVVYFPKKKLLFGGCMIKPKELGY--LGDANV 199 (246)
T ss_dssp ---------------------------------------CCCSSSTTCCEEEETTTTEEEEETTCCSSCCCC--CTTCCT
T ss_pred ---------------------------------------CCCCCCCCCEEEEEcCCCEEEECCEeccCCCCC--CCCCCH
Confidence 144455555555544456667777665433332 345678
Q ss_pred HHHHHHHHHHHhcCCCceEEeeCCCC
Q psy5665 257 HKLFQSVRKEIFSLPDHFRVYPAHDY 282 (344)
Q Consensus 257 ~~~~~sl~~~l~~l~~~~~v~pgHg~ 282 (344)
.++.+|+ ++++.++.+. ++||||+
T Consensus 200 ~~~~~sl-~~l~~l~~~~-i~pgHg~ 223 (246)
T 2fhx_A 200 KAWPDSA-RRLKKFDAKI-VIPGHGE 223 (246)
T ss_dssp TTHHHHH-HHGGGSCCSE-EEESBSC
T ss_pred HHHHHHH-HHHHhCCCCE-EECCCCC
Confidence 8899999 5899997776 9999994
No 22
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.90 E-value=1.5e-23 Score=190.65 Aligned_cols=186 Identities=12% Similarity=0.150 Sum_probs=125.6
Q ss_pred ecCcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhhhheecccccccc
Q psy5665 48 DSISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKTMYVINTHVHADH 123 (344)
Q Consensus 48 ~~~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~ 123 (344)
.+..+.|||+|.++ ++.+|||||.+ ..+.+.+.+++.+.+ |++|++||.|.||+||+..|.+.+.+.++.+...
T Consensus 53 vg~~~~~~~li~~~--~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~ 130 (303)
T 4ax1_B 53 VGTCGISALLVTSD--AGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKATGAPVYARAPA 130 (303)
T ss_dssp CSBSSSCCEEECCT--TCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHHCCCEEEEHHH
T ss_pred eCCCCceEEEEEeC--CcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhcCCEEEEcHHH
Confidence 35567899999975 67999999953 568888999998876 8999999999999999999998777777766543
Q ss_pred ccchhHHHhhhh--hhHHhhh--cccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeecc
Q psy5665 124 ITGTGKIKTMVN--NVQSIIS--KESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRG 199 (344)
Q Consensus 124 ~~~~~~l~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~ 199 (344)
...+..... ....+.. ..........+.+++.+.+|+..++++++|||+++++++++++.+..+
T Consensus 131 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~~~--------- 198 (303)
T 4ax1_B 131 ---IDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDD--------- 198 (303)
T ss_dssp ---HHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTE---------
T ss_pred ---HHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEecCCCc---------
Confidence 222221110 0000000 011112344566677777777677777777777777666665421111
Q ss_pred CCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCC-----CCHHHHHHHHHHHHhcCCCce
Q psy5665 200 CGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQ-----GDSHKLFQSVRKEIFSLPDHF 274 (344)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~-----~~~~~~~~sl~~~l~~l~~~~ 274 (344)
.+.+++||.++....+...+++ .+..+|.+++ ++++.+++++
T Consensus 199 --------------------------------~~~~l~gD~l~~~~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~ 245 (303)
T 4ax1_B 199 --------------------------------CRQMVYADSLTAISDDVFRYSDDAAHPGYLAAFRNTL-ARVAALDCDI 245 (303)
T ss_dssp --------------------------------EEEEEECCCCCCCCCSSCCTTCGGGSTTHHHHHHHHH-HHHHTSCCSE
T ss_pred --------------------------------eeEEEEeCCccccCcCcccCCCCCCCccHHHHHHHHH-HHHhcCCCCE
Confidence 1235568888776666665554 3568888899 6999999998
Q ss_pred EEeeCCC
Q psy5665 275 RVYPAHD 281 (344)
Q Consensus 275 ~v~pgHg 281 (344)
++||||
T Consensus 246 -vv~~Hg 251 (303)
T 4ax1_B 246 -LVTPHP 251 (303)
T ss_dssp -EECSSG
T ss_pred -EEcCCc
Confidence 999999
No 23
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.90 E-value=6e-23 Score=179.68 Aligned_cols=196 Identities=14% Similarity=0.171 Sum_probs=124.1
Q ss_pred eecccCCeeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCCC--hHHHHHHHHHc-CCcccEEEecCCchhhhcChhhhh
Q psy5665 34 ENAFSNGFLFRQLFDSISYTHTYILADKLSKECVIIDPVLEQ--ADRDVTLINQL-GLTLKYVINTHVHADHITGTGKIK 110 (344)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~~--~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg~~~~~ 110 (344)
..++.++.|.... +.....|||+|.++ ++++|||||.+. .+.+.+.+++. ..+|++|++||.|.||+||+..|.
T Consensus 8 ~~~l~~~v~~i~~-~~~~~~n~~li~~~--~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~ 84 (233)
T 3q6v_A 8 LTHFKGPLYIVED-KEYVQENSMVYIGT--DGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWK 84 (233)
T ss_dssp EEEEETTEEEEEE-CSSSCEEEEEEECS--SCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHH
T ss_pred eEEecCCEEEEeC-CCcCCCcEEEEEeC--CeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHh
Confidence 3345555443331 12357899999975 679999999652 46777888775 667999999999999999999998
Q ss_pred hhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceee
Q psy5665 111 TMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAF 190 (344)
Q Consensus 111 ~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~ 190 (344)
+..+.+++++.. ...+.........+..... .. +.. .....+. ..+.+.
T Consensus 85 -~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~-----------~~--~~~-------~~~~~~~---~~~~~~---- 133 (233)
T 3q6v_A 85 -TLGAKIVATQMT---YDLQKSQWGSIVNFTRQGN-----------NK--YPN-------LEKSLPD---TVFPGD---- 133 (233)
T ss_dssp -HTTCEEEEEHHH---HHHHHHHHHHHHHHHHHHS-----------TT--CCC-------CCCCCCS---EEESSC----
T ss_pred -hCCCEEEEcHHH---HHHHHhhhHHHHHHHhccc-----------cc--ccc-------ccccCCC---EEeCCC----
Confidence 355666666544 2222221111111100000 00 000 0000000 011110
Q ss_pred ecceeeeccCCCccccCCCCCceeecC-CCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhc
Q psy5665 191 TGDTLLIRGCGRTDFQQGGSGVPVRAT-PGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFS 269 (344)
Q Consensus 191 ~GD~~~~~~~~~~~~~~~~~~~~~~~~-pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~ 269 (344)
..+++..++++.+ ||||+||++++.++++++| ||.++....+. ++.++..+|.+++ ++++.
T Consensus 134 --------------~~l~~~~~~v~~~~pGHt~g~~~~~~~~~~~lf-gD~~~~~~~~~--~~~~~~~~~~~sl-~~l~~ 195 (233)
T 3q6v_A 134 --------------FNLQNGSIRAMYLGEAHTKDGIFVYFPAERVLY-GNCILKENLGN--MSFANRTEYPKTL-EKLKG 195 (233)
T ss_dssp --------------EEETTTTEEEECCCCSSSSSCCEEEETTTTEEE-CTTTSCSSCCC--CTTCCTTHHHHHH-HHHHH
T ss_pred --------------eEEcCceEEEEECCCCCCcCcEEEEeccCCEEE-CceeccccCCC--CCcCCHHHHHHHH-HHHHH
Confidence 1122335788888 9999999999999899999 99988766655 3567888999999 68888
Q ss_pred C------CCceEEeeCCCC
Q psy5665 270 L------PDHFRVYPAHDY 282 (344)
Q Consensus 270 l------~~~~~v~pgHg~ 282 (344)
+ +.+. ++||||.
T Consensus 196 l~~~~~~~~~~-i~pgHg~ 213 (233)
T 3q6v_A 196 LIEQGELKVDS-IIAGHDT 213 (233)
T ss_dssp HHHTTSSCCSE-EECSSSS
T ss_pred hhhcccCCCeE-EECCCCC
Confidence 7 7776 9999993
No 24
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.90 E-value=5.5e-23 Score=186.10 Aligned_cols=166 Identities=25% Similarity=0.361 Sum_probs=105.2
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCCh----HHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhh----eeccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQA----DRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMY----VINTHVHAD 122 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~----~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~----~v~~~~~~d 122 (344)
.+.|||+|.++ ++++|||||.+.. +.+.+.+++.+.+|++||+||.|.||+||+..|.+.+ .+.++.+..
T Consensus 30 ~~~n~~li~~~--~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~ 107 (289)
T 4ad9_A 30 QGTNTYLVGTG--PRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPR 107 (289)
T ss_dssp TCCEEEEECSS--SSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCC
T ss_pred CceEEEEEecC--CceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCC
Confidence 46899999875 6799999996432 4566677777889999999999999999998888764 222322221
Q ss_pred cccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCC
Q psy5665 123 HITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGR 202 (344)
Q Consensus 123 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~ 202 (344)
.... +. ... ........+.+++.+.+|+..++++++|||+++++
T Consensus 108 ~~~~--------~~---~~~--~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~----------------------- 151 (289)
T 4ad9_A 108 NPQR--------EE---IIG--NGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHM----------------------- 151 (289)
T ss_dssp SSCC--------CC---CBT--TTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCE-----------------------
T ss_pred Ccch--------hh---hcc--CCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCE-----------------------
Confidence 1000 00 000 00112233444555555555555555555555544
Q ss_pred ccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcCCCceEEeeCCCC
Q psy5665 203 TDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSLPDHFRVYPAHDY 282 (344)
Q Consensus 203 ~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~ 282 (344)
+|+.++.+++|+||+++...... ..+..+|.+++ +++..++++. ++||||+
T Consensus 152 -----------------------~~~~~~~~~lftGD~~~~~~~~~----~~~~~~~~~sl-~~l~~l~~~~-v~pgHg~ 202 (289)
T 4ad9_A 152 -----------------------ALLLEEENAIFSGDCILGEGTTV----FEDLYDYMNSL-KELLKIKADI-IYPGHGP 202 (289)
T ss_dssp -----------------------EEEETTTTEEEEETSSCSSSCCC----CSCHHHHHHHH-HHHHHHTCSE-EEESSSS
T ss_pred -----------------------EEEEcCCCEEEEecccCCCCCcC----cCCHHHHHHHH-HHHHcCCCCE-EEeCCCC
Confidence 44444456777777665432221 24788899999 6888898885 9999995
Q ss_pred C
Q psy5665 283 H 283 (344)
Q Consensus 283 ~ 283 (344)
.
T Consensus 203 ~ 203 (289)
T 4ad9_A 203 V 203 (289)
T ss_dssp C
T ss_pred h
Confidence 4
No 25
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.90 E-value=7.2e-23 Score=183.05 Aligned_cols=186 Identities=17% Similarity=0.215 Sum_probs=116.0
Q ss_pred eeecccCCeeEEEEE----ecCcceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHc-CCcccEEEecCCchhhhcC
Q psy5665 33 LENAFSNGFLFRQLF----DSISYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQL-GLTLKYVINTHVHADHITG 105 (344)
Q Consensus 33 ~~~~~~~~~~~~~~~----~~~~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg 105 (344)
...++.++.|..... .+....|||+|.++ ++++|||||.+ ..+.+.+.+++. +.+|++|++||.|.||+||
T Consensus 44 ~~~~l~dgv~~~~~~~~~~~~~~~~n~~li~~~--~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg 121 (265)
T 2y8b_A 44 RLYKIGDGVWSHIATQKLGDTVYSSNGLIVRDA--DELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGG 121 (265)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTT
T ss_pred eEEEecCCeEEEeccccCCCCcccceEEEEEEC--CeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCC
Confidence 344556665543321 13456899999985 77999999964 356788888887 8899999999999999999
Q ss_pred hhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCC
Q psy5665 106 TGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQG 185 (344)
Q Consensus 106 ~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~ 185 (344)
+..+.+. .+.++.+... ...+.... . ...... +. +- ..+
T Consensus 122 ~~~~~~~-~a~v~~~~~~---~~~~~~~~--------~---~~~~~~--------~~----------~~--------~~~ 160 (265)
T 2y8b_A 122 VDVLRAA-GVATYTSPLT---RQLAEAAG--------N---EVPAHS--------LK----------AL--------SSS 160 (265)
T ss_dssp HHHHHHT-TCEEEECHHH---HHHHHHTT--------C---CCCSEE--------CS----------SC--------SST
T ss_pred HHHHhhC-CCeEEECHHH---HHHHHhcc--------c---cccccc--------cc----------cc--------CCC
Confidence 9988763 4445544432 11111110 0 000000 00 00 000
Q ss_pred CceeeecceeeeccCCCccccCCCCCcee-ecCCCCCCCceeeeecCcceeEecceeeccC---cccccCCCCCHHHHHH
Q psy5665 186 EGMAFTGDTLLIRGCGRTDFQQGGSGVPV-RATPGHTDGCVTYVNQGEGMAFTGDTLLIRG---CGRTDFQQGDSHKLFQ 261 (344)
Q Consensus 186 ~~iL~~GD~~~~~~~~~~~~~~~~~~~~~-~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~---~~~~~~~~~~~~~~~~ 261 (344)
||. +..+ .+++ +.+|||||||++++.++++++|+||+++... ++.. ...+..++.+
T Consensus 161 ------~~~----------~~~g--~~~v~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~--~~~d~~~~~~ 220 (265)
T 2y8b_A 161 ------GDV----------VRFG--PVEVFYPGAAHSGDNLVVYVPAVRVLFGGCAVHEASRESAGNV--ADANLAEWPA 220 (265)
T ss_dssp ------TEE----------EEET--TEEEEECCSSSSTTCCEEEETTTTEEEEETTSCCTTCCSCCCC--TTCCTTTHHH
T ss_pred ------CcE----------Eeec--CEEEEecCCCCCCCCEEEEecCCCEEEEccccccCCCcccCcC--CcCCHHHHHH
Confidence 111 1112 2555 6788888888888888788999999887642 2222 2467788899
Q ss_pred HHHHHHhcC-CCceEEeeCCCC
Q psy5665 262 SVRKEIFSL-PDHFRVYPAHDY 282 (344)
Q Consensus 262 sl~~~l~~l-~~~~~v~pgHg~ 282 (344)
++ +++..+ ++...++||||+
T Consensus 221 sl-~~l~~~~~~~~~v~pgHg~ 241 (265)
T 2y8b_A 221 TI-KRIQQRYPEAEVVIPGHGL 241 (265)
T ss_dssp HH-HHHHHHCTTCSEEEESSSC
T ss_pred HH-HHHHhhCCCCCEEECCCCC
Confidence 99 466654 333459999994
No 26
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.90 E-value=1.5e-22 Score=176.67 Aligned_cols=186 Identities=16% Similarity=0.170 Sum_probs=111.5
Q ss_pred eeecccCCeeEEEEEe----cCcceEEEEEEeCCCCeEEEEeCCCCC--hHHHHHHHHHc-CCcccEEEecCCchhhhcC
Q psy5665 33 LENAFSNGFLFRQLFD----SISYTHTYILADKLSKECVIIDPVLEQ--ADRDVTLINQL-GLTLKYVINTHVHADHITG 105 (344)
Q Consensus 33 ~~~~~~~~~~~~~~~~----~~~~~~~~li~~~~~~~~iLIDtG~~~--~~~~~~~l~~~-~~~i~~Vi~TH~H~DH~gg 105 (344)
...++.++.|...... .....|||+|.++ ++++|||||.+. .+.+.+.+++. ..+|++|++||.|.||+||
T Consensus 17 ~~~~i~~~v~~~~~~~~~~~~~~~~n~~li~~~--~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg 94 (227)
T 1mqo_A 17 SISQLNKNVWVHTELGSFNGEAVPSNGLVLNTS--KGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGG 94 (227)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTT
T ss_pred EEEEecCCeEEEEeeecccCceecceEEEEEeC--CeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccc
Confidence 3445666666533322 2235799999985 779999999763 35677888876 6789999999999999999
Q ss_pred hhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCC
Q psy5665 106 TGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQG 185 (344)
Q Consensus 106 ~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~ 185 (344)
+..|.+. .+.++.+... ...+. .. . ...+...+.+++.+.+|+.
T Consensus 95 ~~~l~~~-~~~v~~~~~~---~~~~~-~~--------~--~~~~~~~~~~~~~~~~g~~--------------------- 138 (227)
T 1mqo_A 95 IKTLKER-GIKAHSTALT---AELAK-KN--------G--YEEPLGDLQTVTNLKFGNM--------------------- 138 (227)
T ss_dssp HHHHHHH-TCEEECBHHH---HHHHH-HT--------T--CCCCCCCBCSEEEEEETTE---------------------
T ss_pred hHHHhhC-CcEEEeccch---HHHHH-hc--------C--CCCCccccCCCCeeeECCE---------------------
Confidence 9999875 3444443322 11110 00 0 0001112223333344443
Q ss_pred CceeeecceeeeccCCCccccCCCCCceee-cCCCCCCCceeeeecCcceeEecceeeccCcccc-cCCCCCHHHHHHHH
Q psy5665 186 EGMAFTGDTLLIRGCGRTDFQQGGSGVPVR-ATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRT-DFQQGDSHKLFQSV 263 (344)
Q Consensus 186 ~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~-~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~-~~~~~~~~~~~~sl 263 (344)
.++++ .+||||+||++++.++.+++|+||+++....+.. .++..+..+|.+|+
T Consensus 139 -------------------------~i~~~~~~pgHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl 193 (227)
T 1mqo_A 139 -------------------------KVETFYPGKGHTEDNIVVWLPQYNILVGGCLVKSTSAKDLGNVADAYVNEWSTSI 193 (227)
T ss_dssp -------------------------EEEEECCCCSSSSSCCEEEETTTTEEEEETTSCCTTCCSCCCCTTCCHHHHHHHH
T ss_pred -------------------------EEEEEecCCCCCCCCEEEEECCCCEEEEeeeeeccCccccCcCCCCCHHHHHHHH
Confidence 44444 3566666666666555667777777654322211 12456788899999
Q ss_pred HHHHhc-CCCceEEeeCCCC
Q psy5665 264 RKEIFS-LPDHFRVYPAHDY 282 (344)
Q Consensus 264 ~~~l~~-l~~~~~v~pgHg~ 282 (344)
++++. +++...++||||+
T Consensus 194 -~~l~~~~~~~~~i~pgHg~ 212 (227)
T 1mqo_A 194 -ENVLKRYRNINAVVPGHGE 212 (227)
T ss_dssp -HHHHHHCCSCSEEEESSSC
T ss_pred -HHHHHhcCCCCEEEcCCCC
Confidence 46665 4333349999994
No 27
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.90 E-value=6.2e-23 Score=179.35 Aligned_cols=165 Identities=22% Similarity=0.222 Sum_probs=112.4
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC--ChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccccccccchh
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE--QADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGTG 128 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~--~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~~ 128 (344)
..+|||+|.++ ++++|||||.. ..+.+.+.+++.+.+|++|++||.|.||+||+..|.+. .+.++++... ..
T Consensus 31 ~~~n~~li~~~--~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~-~~~v~~~~~~---~~ 104 (228)
T 1jjt_A 31 VPKHGLVVLVN--AEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSR-SIPTYASELT---NE 104 (228)
T ss_dssp EEEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHHT-TCCEEEEHHH---HH
T ss_pred ccceEEEEEEC--CcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHhC-CCEEEEChHH---HH
Confidence 46799999985 77999999964 34678888888888999999999999999999988762 4444444322 11
Q ss_pred HHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCccccCC
Q psy5665 129 KIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQG 208 (344)
Q Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~ 208 (344)
.+... . ..... ..+ + |+ .+.++
T Consensus 105 ~~~~~--~---------~~~~~--------~~~----------------------~-------g~----------~~~l~ 126 (228)
T 1jjt_A 105 LLKKD--G---------KVQAT--------NSF----------------------S-------GV----------NYWLV 126 (228)
T ss_dssp HHHHT--T---------CCCCS--------EEE----------------------C-------SS----------CCEEE
T ss_pred HHHhc--C---------CcCcc--------ccc----------------------c-------Cc----------ceEec
Confidence 11100 0 00000 000 0 00 12234
Q ss_pred CCCceee-cCCCCCCCceeeeecCcceeEecceeeccCcccccCCCCCHHHHHHHHHHHHhcC-CCceEEeeCCCC
Q psy5665 209 GSGVPVR-ATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGDSHKLFQSVRKEIFSL-PDHFRVYPAHDY 282 (344)
Q Consensus 209 ~~~~~~~-~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~~~~~~~~sl~~~l~~l-~~~~~v~pgHg~ 282 (344)
+..++++ .+||||+||++++.++++++|+||+++...++.. ...+..++.+|+ ++++.+ ++..+++||||+
T Consensus 127 ~~~i~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~--~~~d~~~~~~sl-~~l~~~~~~~~~i~pgHg~ 199 (228)
T 1jjt_A 127 KNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNL--GDANIEAWPKSA-KLLKSKYGKAKLVVPSHSE 199 (228)
T ss_dssp TTTEEEECCCCSSSTTCCEEEETTTTEEEEETTCCTTCCCCC--TTCCTTTHHHHH-HHHHHHTTTCSEEEESSSC
T ss_pred CceEEEEecCCCCCCCcEEEEECCCcEEEEeccccccccCcc--CccCHHHHHHHH-HHHHhhcCCCCEEEcCCCC
Confidence 5567886 7899999999999888899999999876544433 356778889999 567664 333359999994
No 28
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.89 E-value=5.8e-22 Score=177.43 Aligned_cols=199 Identities=16% Similarity=0.148 Sum_probs=119.3
Q ss_pred cCcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhhhheeccccccccc
Q psy5665 49 SISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKTMYVINTHVHADHI 124 (344)
Q Consensus 49 ~~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~ 124 (344)
+....|||+|.++ ++++|||||.+ ..+.+.+.|++.|++ |++|++||.|.||+||+..|.+.+.+.++.+...
T Consensus 34 g~~~~~~~li~~~--~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~- 110 (269)
T 1sml_A 34 GTEDLTALLVQTP--DGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAES- 110 (269)
T ss_dssp SBTTBCCEEEEET--TEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHHH-
T ss_pred cCCCcEEEEEEeC--CceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhcCCeEEECHHH-
Confidence 4456789999986 67999999964 357788899998875 9999999999999999999998766666655433
Q ss_pred cchhHHHhhhhhhHHhhh--cccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCC
Q psy5665 125 TGTGKIKTMVNNVQSIIS--KESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGR 202 (344)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~ 202 (344)
...+.........+.. ..........+.+++.+.+|+..++++++|||++++++++++..
T Consensus 111 --~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~~~~~~~~~---------------- 172 (269)
T 1sml_A 111 --AVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDT---------------- 172 (269)
T ss_dssp --HHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEE----------------
T ss_pred --HHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEECCEEEEEEECCCCCcccEEEEEecc----------------
Confidence 1111111000000000 00000112334444444555444444444444444444443210
Q ss_pred ccccCCCCCceeecCCCCCCCceeeeecCc--ceeEecceeeccCcccccCCC--CCHHHHHHHHHHHHhcCCCceEEee
Q psy5665 203 TDFQQGGSGVPVRATPGHTDGCVTYVNQGE--GMAFTGDTLLIRGCGRTDFQQ--GDSHKLFQSVRKEIFSLPDHFRVYP 278 (344)
Q Consensus 203 ~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~--~~lf~GD~l~~~~~~~~~~~~--~~~~~~~~sl~~~l~~l~~~~~v~p 278 (344)
... ..++.||.++.+..+...... .+..++.+++ +++..++.++ ++|
T Consensus 173 ---------------------------~~~~~~~l~~gD~l~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~-l~~ 223 (269)
T 1sml_A 173 ---------------------------RNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSF-ATVRALPCDV-LLT 223 (269)
T ss_dssp ---------------------------ETTEEEEEEECCCCCCTTCCCSSCTTCTTHHHHHHHHH-HHHHTSCCSE-EEC
T ss_pred ---------------------------cCCceeEEEEeccccCCCcccccCCCCCcCHHHHHHHH-HHHHcCCCCE-EEe
Confidence 001 156668887754444332211 1357778888 6899999998 899
Q ss_pred CCCCCCCccccHHHHHHcCCCCC
Q psy5665 279 AHDYHGFSHSTVGEEKLYNPRLG 301 (344)
Q Consensus 279 gHg~~~~~~~~~~~~~~~~~~l~ 301 (344)
||+ .+.+..+..+.++.+.
T Consensus 224 ~H~----~~~~~~~~~~~~P~~a 242 (269)
T 1sml_A 224 PHP----GASNWDYAAGARAGAK 242 (269)
T ss_dssp SSG----GGGTCCGGGGGGTTTT
T ss_pred CCC----CccchhhhhccCCCCC
Confidence 999 5556566666667654
No 29
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.87 E-value=3.3e-21 Score=175.56 Aligned_cols=185 Identities=16% Similarity=0.199 Sum_probs=108.3
Q ss_pred cCcceEEEEE-EeCCCCeEEEEeCCCCC-hHHHHHHHHHc---CCcccEEEecCCchhhhcChhhhhhhh-eeccccccc
Q psy5665 49 SISYTHTYIL-ADKLSKECVIIDPVLEQ-ADRDVTLINQL---GLTLKYVINTHVHADHITGTGKIKTMY-VINTHVHAD 122 (344)
Q Consensus 49 ~~~~~~~~li-~~~~~~~~iLIDtG~~~-~~~~~~~l~~~---~~~i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d 122 (344)
+....|||+| .++ ++++|||||.+. .+.+.+.+++. +.+|++|++||.|.||+||+..+.+.+ .+.++++..
T Consensus 20 g~~~~n~~li~~~~--~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~ 97 (303)
T 2vw8_A 20 GDVQVPVFLLRLGE--ASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASER 97 (303)
T ss_dssp SCTTSCEEEEEEET--TEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHH
T ss_pred cCCCceEEEEEeCC--CceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHhCCCCeEEECHH
Confidence 4567899999 464 679999999753 56677777764 346999999999999999999998765 455555543
Q ss_pred cccchhH--HHhhhhhhHHhhhcccc---------cccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 123 HITGTGK--IKTMVNNVQSIISKESG---------AQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 123 ~~~~~~~--l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
....... ....+............ ......+.+++.+.+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~---------------------------- 149 (303)
T 2vw8_A 98 TCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGP---------------------------- 149 (303)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEET----------------------------
T ss_pred HHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCC----------------------------
Confidence 3110000 00000000000000000 00002223333333333
Q ss_pred cceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccC--cc--cccCCCCCHHHHHHHHHHHH
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRG--CG--RTDFQQGDSHKLFQSVRKEI 267 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~--~~--~~~~~~~~~~~~~~sl~~~l 267 (344)
+..++++.+||||+||++|+.++.+++|+||++.... .+ .+. ...+..+|.+|+ +++
T Consensus 150 -----------------g~~l~~i~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~-~~~d~~~~~~sl-~~l 210 (303)
T 2vw8_A 150 -----------------RHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPL-VFDDMEAYLESL-ERL 210 (303)
T ss_dssp -----------------TEEEEEEECTTSSTTCEEEEETTTTEEEEETTTCEECTTTCSEECC-CSSCHHHHHHHH-HHH
T ss_pred -----------------CeEEEEEECCCCCcccEEEEECCCCEEEEcCccCcccCcccccCCC-CCCCHHHHHHHH-HHH
Confidence 1445555566666666666655566777777653211 11 111 246889999999 689
Q ss_pred hcCCCceEEeeCCCC
Q psy5665 268 FSLPDHFRVYPAHDY 282 (344)
Q Consensus 268 ~~l~~~~~v~pgHg~ 282 (344)
+.+++++.++||||.
T Consensus 211 ~~l~~~~~v~pgHg~ 225 (303)
T 2vw8_A 211 QRLPTLLQLIPGHGG 225 (303)
T ss_dssp HTSSCCSEEEESSSC
T ss_pred hcCCCCeEEECCCCC
Confidence 999888449999993
No 30
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.86 E-value=1.2e-21 Score=173.79 Aligned_cols=170 Identities=21% Similarity=0.308 Sum_probs=105.8
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCC------------------------hHHHHHHHHHcCCc---ccEEEecCCchhhh
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQ------------------------ADRDVTLINQLGLT---LKYVINTHVHADHI 103 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~------------------------~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~ 103 (344)
...|||+|+++ ++.+|||||.+. .+.+.+.|++.+.+ |++|++||.|.||+
T Consensus 37 ~~~~~~lI~~~--~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~ 114 (254)
T 3dha_A 37 LPVWCYLLETE--EGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHA 114 (254)
T ss_dssp EEEEEEEEEET--TEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHH
T ss_pred EeeEEEEEECC--CccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcC
Confidence 34699999986 779999999541 36688999998876 89999999999999
Q ss_pred cChhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEe
Q psy5665 104 TGTGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVN 183 (344)
Q Consensus 104 gg~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~ 183 (344)
||+..|++. .++.+... ...+... ..+............+.+++....+
T Consensus 115 gg~~~~~~~---~i~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 163 (254)
T 3dha_A 115 GGNGAFTNT---PIIVQRTE---YEAALHR----EEYMKECILPHLNYKIIEGDYEVVP--------------------- 163 (254)
T ss_dssp TTGGGCSSS---CEEEEHHH---HHHHHHC----TTSCGGGSCTTSCEEEECSSEEEET---------------------
T ss_pred CChHHCCCC---EEEECHHH---HHHhhcc----ccccccccCcccceEEecCCccccC---------------------
Confidence 999988743 23333221 1111110 0000000000001111111111111
Q ss_pred CCCceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecCc---ceeEecceeeccCccc--ccCCCCCHHH
Q psy5665 184 QGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGE---GMAFTGDTLLIRGCGR--TDFQQGDSHK 258 (344)
Q Consensus 184 ~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~---~~lf~GD~l~~~~~~~--~~~~~~~~~~ 258 (344)
.++++.+||||+||++++.+.+ +++|+||+++...... ..++..+..+
T Consensus 164 ---------------------------~i~~~~~pGHt~g~~~~~~~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~d~~~ 216 (254)
T 3dha_A 164 ---------------------------GVQLLYTPGHSPGHQSLFIETEQSGSVLLTIDASYTKENFEDEVPFAGFDPEL 216 (254)
T ss_dssp ---------------------------TEEEEECCSSSTTCEEEEEEETTTEEEEEEETTCSSHHHHHSCCCCSCSCHHH
T ss_pred ---------------------------CEEEEECCCCCCCCEEEEEEeCCCCEEEEEecccchhhhcccCCCcCcCCHHH
Confidence 1566777777777777776533 6888999887543322 2345678999
Q ss_pred HHHHHHHHHhcCCCc--eEEeeCCC
Q psy5665 259 LFQSVRKEIFSLPDH--FRVYPAHD 281 (344)
Q Consensus 259 ~~~sl~~~l~~l~~~--~~v~pgHg 281 (344)
+.+|+ ++|..+..+ ..|+||||
T Consensus 217 ~~~sl-~~l~~l~~~~~~~v~pgHg 240 (254)
T 3dha_A 217 ALSSI-KRLKEVVKKEKPIIFFGHD 240 (254)
T ss_dssp HHHHH-HHHHHHHHHHCCEEEESSC
T ss_pred HHHHH-HHHHHHHHhcCCEEEeCCC
Confidence 99999 588877543 35999999
No 31
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.86 E-value=7.1e-21 Score=179.48 Aligned_cols=126 Identities=14% Similarity=0.170 Sum_probs=92.8
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHc--CCcccEEEecCCchhhhcChhhhhhhh--eecccccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQL--GLTLKYVINTHVHADHITGTGKIKTMY--VINTHVHADHIT 125 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~--~~~i~~Vi~TH~H~DH~gg~~~~~~~~--~v~~~~~~d~~~ 125 (344)
...|||||.++ ++++|||||.. ..+.+++.|++. ..+|++||+||.|+||+||+..+.+++ .+.++++...
T Consensus 50 tsyNsYLI~~~--~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~-- 125 (410)
T 4dik_A 50 ISYNAYLVKLN--GANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFG-- 125 (410)
T ss_dssp EEEEEEEEECS--SCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHH--
T ss_pred eEEEEEEEEEC--CeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHH--
Confidence 44599999875 67999999953 457788888875 345999999999999999999998765 2334433321
Q ss_pred chhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCC-CCCCceEEEeCCCceeeecce
Q psy5665 126 GTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPG-HTDGCVTYVNQGEGMAFTGDT 194 (344)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pg-ht~~~~~~~~~~~~iL~~GD~ 194 (344)
...+...+ .......+.+|+.+++|+..++++++|| |+|++++++. +++||+||.
T Consensus 126 -~~~l~~~~-----------~~~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~~~~y~--~~iLFsgD~ 181 (410)
T 4dik_A 126 -KRLLEGFY-----------GIKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--DGILFSCDV 181 (410)
T ss_dssp -HHHHHHHH-----------CCCCEEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--TTEEEEETT
T ss_pred -HHHHHhhc-----------CccceeEecCCCEEeecceEEEEecCCCCCCCCCeeEEe--CCceEcccc
Confidence 11111111 1123456889999999999999999999 9999999886 468888886
No 32
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.84 E-value=3e-20 Score=175.83 Aligned_cols=133 Identities=17% Similarity=0.234 Sum_probs=91.9
Q ss_pred CcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHc-----CCcccEEEecCCchhhhcChhhhhhhh-eeccccccc
Q psy5665 50 ISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQL-----GLTLKYVINTHVHADHITGTGKIKTMY-VINTHVHAD 122 (344)
Q Consensus 50 ~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~-----~~~i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d 122 (344)
+...|||+|.++ ++++|||||.. ..+.+.+.+++. ..+|++|++||.|.||+||+..+.+.+ .+.++.+..
T Consensus 32 g~~~n~~li~~~--~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~ 109 (404)
T 2ohh_A 32 GTTYNAYLVCGD--EGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEV 109 (404)
T ss_dssp CEEECCEEEECS--SCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHH
T ss_pred CCeEEEEEEEeC--CcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHH
Confidence 345799999975 66999999964 357777888775 357999999999999999999998765 455555543
Q ss_pred cccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCC-CCCCCceEEEeCCCceeeeccee
Q psy5665 123 HITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATP-GHTDGCVTYVNQGEGMAFTGDTL 195 (344)
Q Consensus 123 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-ght~~~~~~~~~~~~iL~~GD~~ 195 (344)
. ...+...+. . ........+.+++.+.+|+..++++++| ||++++++++.++.++||+||++
T Consensus 110 ~---~~~~~~~~~-~-------~~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~~~~~~lf~GD~~ 172 (404)
T 2ohh_A 110 A---VKGLLKHYP-S-------LREAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLDEDGILFSNDAF 172 (404)
T ss_dssp H---HHHHHHHCG-G-------GGGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEETTTEEECTTTT
T ss_pred H---HHHHHHHhc-c-------cccCCceEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEECCCcEEEecCcc
Confidence 3 222222111 0 0011334566777777777778888887 78877777777666666666653
No 33
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.84 E-value=5.6e-22 Score=178.63 Aligned_cols=180 Identities=18% Similarity=0.227 Sum_probs=110.7
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCC---------------hHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhh-
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQ---------------ADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKT- 111 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~---------------~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~- 111 (344)
.+.|||+|.++ ++++|||||.+. .+.+.+.|++.+.+ |++|++||.|.||+||+..+.+
T Consensus 46 ~~~n~~lI~~~--~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~ 123 (280)
T 3esh_A 46 LPTHPILIQTA--QYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGH 123 (280)
T ss_dssp EECCCEEEECS--SCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSC
T ss_pred EeEEEEEEEEC--CEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccc
Confidence 34589999986 679999999542 35688889988764 7799999999999999988776
Q ss_pred -hh-eeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCcee
Q psy5665 112 -MY-VINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMA 189 (344)
Q Consensus 112 -~~-~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL 189 (344)
.+ .+.++.+... ...+... .... .. .. . ...+..-...+. .+.+
T Consensus 124 ~~fp~a~i~~~~~~---~~~~~~~--~~~~--~~------~~-~--~~~~~~~~~~~~--------------~~~~---- 169 (280)
T 3esh_A 124 AIFENAIHVVQQDE---WHEFIAP--NIRS--KS------TY-W--DKNKGDYSNKLI--------------LFEK---- 169 (280)
T ss_dssp CSSTTCEEEEEHHH---HHHHHSC--CTTG--GG------TS-C--GGGCCGGGGGEE--------------EESS----
T ss_pred cCCCCCEEEECHHH---HHHhhCc--cccc--cc------ch-h--hhhhhhhhheEE--------------EeCC----
Confidence 33 3444444332 1111110 0000 00 00 0 000000000011 0111
Q ss_pred eecceeeeccCCCccccCCCCCceeecCCCCCCCceeeee--cCcceeEecceeeccCcccccCCC---CCHHHHHHHHH
Q psy5665 190 FTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVN--QGEGMAFTGDTLLIRGCGRTDFQQ---GDSHKLFQSVR 264 (344)
Q Consensus 190 ~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~--~~~~~lf~GD~l~~~~~~~~~~~~---~~~~~~~~sl~ 264 (344)
...+.. .++++.+||||+||++|+. ++.+++|+||+++.+..+++++.. .+..+..++.+
T Consensus 170 --------------~~~l~~-gi~~~~~pGHt~g~~~~~i~~~~~~vlftGD~~~~~~~~~~d~~~~~d~d~~~~~~s~~ 234 (280)
T 3esh_A 170 --------------HFEPVP-GIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKE 234 (280)
T ss_dssp --------------EECSST-TEEEEECCSSSTTCEEEEEEETTEEEEECGGGSCSGGGCSTTCCCTTCSCHHHHHHHHH
T ss_pred --------------CCeEcC-CEEEEEcCCCCcccEEEEEEECCcEEEEEEccCCchhhcCCCccccccCCHHHHHHHHH
Confidence 011112 4778888888888888887 346799999999988888877753 36777777774
Q ss_pred HHHhc-CCCceEEeeCCC
Q psy5665 265 KEIFS-LPDHFRVYPAHD 281 (344)
Q Consensus 265 ~~l~~-l~~~~~v~pgHg 281 (344)
+.+.. .+.+++|+||||
T Consensus 235 ~ll~~~~~~~~~v~pgH~ 252 (280)
T 3esh_A 235 RMIPYFIQQQYWFLFYHD 252 (280)
T ss_dssp HHHHHHHHTTCEEECSSC
T ss_pred HHHHHHHhCCCEEEEEcc
Confidence 33333 356677999999
No 34
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.83 E-value=2.8e-20 Score=185.57 Aligned_cols=215 Identities=12% Similarity=0.200 Sum_probs=118.8
Q ss_pred cccCCeeEEEEEecCcceEEEEEEeCCCCeEEEEeCCCCC--hHHHHHHHHH-c-CCcccEEEecCCchhhhcChhhhhh
Q psy5665 36 AFSNGFLFRQLFDSISYTHTYILADKLSKECVIIDPVLEQ--ADRDVTLINQ-L-GLTLKYVINTHVHADHITGTGKIKT 111 (344)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~iLIDtG~~~--~~~~~~~l~~-~-~~~i~~Vi~TH~H~DH~gg~~~~~~ 111 (344)
++.++.| ++. +....|||+|.++ ++++|||||... .+.+++.+++ . ..+|++||+||.|.||+||+..|.+
T Consensus 109 ~V~~gVy--~i~-g~~~~N~ylI~~~--~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~ 183 (658)
T 2cfu_A 109 EVAEGIY--QVR-GFDLANITFIRGD--SGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVE 183 (658)
T ss_dssp EEETTEE--EEE-SSSSSCEEEEECS--SSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCC
T ss_pred EEeCCEE--EEe-cCCCeEEEEEEEC--CEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHh
Confidence 4455533 333 3345799999975 679999999752 2345566654 4 4679999999999999999999986
Q ss_pred -----hheeccccccccccch--hH-HH-hhhhhhHHhh-hcccccccceEccC--CCeeEeCCeeEEEEeCCCCCCCce
Q psy5665 112 -----MYVINTHVHADHITGT--GK-IK-TMVNNVQSII-SKESGAQADIHVTH--GDTIDFGDQQLEVRATPGHTDGCV 179 (344)
Q Consensus 112 -----~~~v~~~~~~d~~~~~--~~-l~-~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~g~~~i~~~~~pght~~~~ 179 (344)
...+.+++|....... .. +. ........+. ...........+.. +.....+.. ...+...
T Consensus 184 ~~~~~~~~a~V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~--------~~~~p~~ 255 (658)
T 2cfu_A 184 PQQVASGAVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPL--------SLLAPTR 255 (658)
T ss_dssp HHHHHTTSSEEEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCC--------CCCCCSE
T ss_pred hhhccCCCCEEEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCc--------cCCCCcE
Confidence 2455666665431100 00 00 0000000011 00000000000000 000001100 0000000
Q ss_pred EEEeCCCceeeecceeeeccCCCccccCCCCCceeecCCCC-CCCceeeeecCcceeEecceeeccCcccccCCC---CC
Q psy5665 180 TYVNQGEGMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGH-TDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQ---GD 255 (344)
Q Consensus 180 ~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGH-t~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~---~~ 255 (344)
.+.. .|| .+.+++..++++++||| ||||++||.++.+++|+||.++........+.+ .+
T Consensus 256 -~~~~------dG~----------~l~lgg~~l~vi~tPGHhTpg~i~~~~p~~~vLftGD~v~~~~~~i~~~~g~~~~d 318 (658)
T 2cfu_A 256 -LIEG------EGE----------DLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRD 318 (658)
T ss_dssp -EECT------TEE----------EEEETTEEEEEEECTTSSSSSBEEEEETTTTEEECTTTSCSSCCCSSCTTCCCCCC
T ss_pred -EEec------Cce----------EEEECCEEEEEEeCCCCCCCCcEEEEECCCCEEEEeccccccCCccccCCCcccCC
Confidence 1111 122 24566778899999998 999999999888999999988753211111222 47
Q ss_pred HHHHHHHHHHHHhcC---CCceEEeeCCCC
Q psy5665 256 SHKLFQSVRKEIFSL---PDHFRVYPAHDY 282 (344)
Q Consensus 256 ~~~~~~sl~~~l~~l---~~~~~v~pgHg~ 282 (344)
...|.+++ ++++.+ +.+. ++||||.
T Consensus 319 ~~~~~~sL-~~l~~l~~l~~~~-v~PGHg~ 346 (658)
T 2cfu_A 319 ALGWSKYI-NQALHRFGRQAEV-MFAVHNW 346 (658)
T ss_dssp HHHHHHHH-HHHHHHTGGGCSE-EECSSSC
T ss_pred HHHHHHHH-HHHHHHhCCCCcE-EEeCCCC
Confidence 78888888 455544 6676 9999994
No 35
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.83 E-value=4.3e-20 Score=158.17 Aligned_cols=156 Identities=17% Similarity=0.203 Sum_probs=104.6
Q ss_pred CcceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccccccccchhH
Q psy5665 50 ISYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGTGK 129 (344)
Q Consensus 50 ~~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~~~ 129 (344)
..+.|||+|.++ ++++|||||.. ...+.+.+++.+ +|++|++||. ||+||+..|.+.+.+.++++......
T Consensus 21 ~~~~n~~li~~~--~~~iliD~g~~-~~~~~~~l~~~g-~i~~ii~TH~--DH~gg~~~~~~~~~a~v~~~~~~~~~--- 91 (201)
T 2p97_A 21 NIDFNGFAWIRP--EGNILIDPVAL-SNHDWKHLESLG-GVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKEN--- 91 (201)
T ss_dssp TEEEEEEEECCT--TCCEEESCCCC-CHHHHHHHHHTT-CCSEEECSSG--GGCTTHHHHHHHSCCEEEEEGGGTTS---
T ss_pred CcceeEEEEEeC--CeeEEEECCCC-cHHHHHHHHhcC-CCCEEEECCc--hhhhhHHHHHHhcCCEEEEcHhHhhh---
Confidence 456899999875 66999999943 256778888888 9999999999 99999888887665555554432110
Q ss_pred HHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceeeeccCCCccccCCC
Q psy5665 130 IKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQGG 209 (344)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~~~~~~~~~~~~~~ 209 (344)
+.. .....+.+++. + ..
T Consensus 92 ----~~~-----------~~~~~~~~g~~----------------------------------------------~--~~ 108 (201)
T 2p97_A 92 ----FPI-----------YCDRWLSDGDE----------------------------------------------L--VP 108 (201)
T ss_dssp ----CSS-----------CCSEEECTTCB----------------------------------------------S--ST
T ss_pred ----hcc-----------cCceecCCCCE----------------------------------------------E--cc
Confidence 000 00111111111 1 11
Q ss_pred CCceeecCC-CCCCCceeeeecCcceeEecceeeccCcccccCC----CCCHHHHHHHHHHHHhc-CCCceEEeeCCC
Q psy5665 210 SGVPVRATP-GHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQ----QGDSHKLFQSVRKEIFS-LPDHFRVYPAHD 281 (344)
Q Consensus 210 ~~~~~~~~p-GHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~----~~~~~~~~~sl~~~l~~-l~~~~~v~pgHg 281 (344)
.++++.+| |||+||++++.++ +++|+||+++....+...+. ..+..++.+|+ ++++. ++.+. ++||||
T Consensus 109 -~~~~~~~p~gHt~g~~~~~~~~-~~lf~GD~~~~~~~g~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~~-v~pgHg 182 (201)
T 2p97_A 109 -GLKVMELQGSKTPGELALLLEE-TTLITGDLVRAYRAGGLEILPDEKLMNKQKVVASV-RRLAALEKVEA-VLVGDG 182 (201)
T ss_dssp -TEEEEEECSSSSTTEEEEEETT-TEEEECSSEEBSSTTSCEECCGGGCSCHHHHHHHH-HHHHTCTTCCE-EEESBB
T ss_pred -eEEEEECCCCCCCCcEEEEEcC-CEEEECccccccCCCccccCCccccCCHHHHHHHH-HHHHhcCCCCE-EEeCCC
Confidence 46677777 7777777777765 78888887776533332211 36789999999 58888 56776 999999
No 36
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.83 E-value=8.8e-20 Score=172.27 Aligned_cols=129 Identities=17% Similarity=0.266 Sum_probs=89.4
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHc--CCcccEEEecCCchhhhcChhhhhhhh-eeccccccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQL--GLTLKYVINTHVHADHITGTGKIKTMY-VINTHVHADHITG 126 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~--~~~i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d~~~~ 126 (344)
...|||+|.+ ++.+|||||.. ..+.+.+.+++. ..+|++|++||.|.||+||+..+.+.+ .+.++.+...
T Consensus 34 ~~~n~~li~~---~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~--- 107 (398)
T 1ycg_A 34 TTYNAYLIVD---DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRA--- 107 (398)
T ss_dssp EEECCEEECS---SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHH---
T ss_pred eeEEEEEEEC---CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHH---
Confidence 4579999985 35899999964 356778888876 556999999999999999999998775 4555555433
Q ss_pred hhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCC-CCCCCceEEEeCCCceeeecce
Q psy5665 127 TGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATP-GHTDGCVTYVNQGEGMAFTGDT 194 (344)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-ght~~~~~~~~~~~~iL~~GD~ 194 (344)
...+...+ .. .......+.+++.+.+|+..++++++| ||++++++++.++.+++|+||+
T Consensus 108 ~~~l~~~~-------~~--~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~~~~~~lf~GD~ 167 (398)
T 1ycg_A 108 FDSLKAHY-------SH--IDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVPEEALLLPNDA 167 (398)
T ss_dssp HHHHHHHT-------CS--CCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETT
T ss_pred HHHHHHHh-------CC--CCcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEEEECCCcEEEeccc
Confidence 12222111 00 012334566777777777777777777 6777777777766666666665
No 37
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.82 E-value=1.4e-19 Score=160.95 Aligned_cols=175 Identities=21% Similarity=0.275 Sum_probs=102.7
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCCh-HHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheecccccccccc---c
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQA-DRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHIT---G 126 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~-~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~---~ 126 (344)
...|||+|.++ ++++|||||.+.. ..+ . ...+|++|++||.|.||+||+..|.+.+.+.++++..... .
T Consensus 18 ~~~~~~li~~~--~~~iLiD~G~~~~~~~l----~-~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~l~~ 90 (261)
T 3adr_A 18 EIATVYVMCGE--KLTVMIDAGVSNSIADF----S-FLDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTS 90 (261)
T ss_dssp GGSEEEEEECS--SCEEEECCCCTTCCCCC----T-TCSCCCEEECSCCSGGGTTTHHHHHHHSCCEEEEETTCTHHHHS
T ss_pred CceEEEEEEcC--CcEEEEeCCCCCChhhc----C-CCCCCcEEEECCCCccccCCHHHHHHHhCCeEEECHHHHHHhcC
Confidence 45799999764 6799999996422 222 1 2456999999999999999999999876555666554321 1
Q ss_pred hh---HHHh----hhhhhHHhhhcc-cccc--cceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceee
Q psy5665 127 TG---KIKT----MVNNVQSIISKE-SGAQ--ADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLL 196 (344)
Q Consensus 127 ~~---~l~~----~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~ 196 (344)
.. .+.. .+.......... .... ....+.+++.+.+|+..++++++|||+++++++.. .+++|+||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~~~~~~~~--~~~lf~GD~-- 166 (261)
T 3adr_A 91 EDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV--DDFLFTGDS-- 166 (261)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEEEE--TTEEEEETS--
T ss_pred chhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCCccEEEEE--CCEEEEcCc--
Confidence 00 0000 000000000000 0011 11345556666666666666666666666666643 245555554
Q ss_pred eccCCCccccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcc---cccCCCCCHHHHHHHHHHHHhcCCCc
Q psy5665 197 IRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCG---RTDFQQGDSHKLFQSVRKEIFSLPDH 273 (344)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~---~~~~~~~~~~~~~~sl~~~l~~l~~~ 273 (344)
++....+ ....+..+..++.+++ ++++.++++
T Consensus 167 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~ 201 (261)
T 3adr_A 167 --------------------------------------------AGAYFNGVVIPTTPPVIDYKMYMESL-KRQIELKPK 201 (261)
T ss_dssp --------------------------------------------SCEEETTEEECCCCSCCCHHHHHHHH-HHHHHTCCS
T ss_pred --------------------------------------------ccccccccccCCCCCCCCHHHHHHHH-HHHHcCCCC
Confidence 3221100 0001246788899999 688899988
Q ss_pred eEEeeCCCC
Q psy5665 274 FRVYPAHDY 282 (344)
Q Consensus 274 ~~v~pgHg~ 282 (344)
. ++|||++
T Consensus 202 ~-v~~~H~~ 209 (261)
T 3adr_A 202 V-VGFAHGG 209 (261)
T ss_dssp E-EEETTTE
T ss_pred E-EEeCCCC
Confidence 7 9999994
No 38
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.82 E-value=8.9e-20 Score=173.23 Aligned_cols=129 Identities=18% Similarity=0.192 Sum_probs=87.1
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHc--CCcccEEEecCCchhhhcChhhhhhhh-eeccccccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQL--GLTLKYVINTHVHADHITGTGKIKTMY-VINTHVHADHITG 126 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~--~~~i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d~~~~ 126 (344)
...|||+|.+ ++++|||||.. ..+.+.+.+++. ..+|++|++||.|.||+||+..+.+.+ .+.++.+...
T Consensus 39 ~~~n~~li~~---~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~--- 112 (414)
T 2q9u_A 39 SSYNSYFIDD---ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKC--- 112 (414)
T ss_dssp EEECCEEECS---SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHH---
T ss_pred cceeEEEEEC---CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHH---
Confidence 3579999985 45899999964 346777788775 346999999999999999999998874 5555555443
Q ss_pred hhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCC-CCCCCceEEEeCCCceeeecce
Q psy5665 127 TGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATP-GHTDGCVTYVNQGEGMAFTGDT 194 (344)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-ght~~~~~~~~~~~~iL~~GD~ 194 (344)
...+...+. . .......+.+++.+.+|+..++++++| ||++++++++.++.++||+||.
T Consensus 113 ~~~~~~~~~-------~--~~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~~~~~~~lf~GD~ 172 (414)
T 2q9u_A 113 QEHLKILYG-------M--EKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDG 172 (414)
T ss_dssp HHHHHHHHC-------C--TTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETT
T ss_pred HHHHHHHhC-------C--CCCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEEECCCeEEEEccc
Confidence 122221110 0 011234556677777777777777777 7777777777666666666664
No 39
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.82 E-value=1.4e-19 Score=171.18 Aligned_cols=130 Identities=14% Similarity=0.159 Sum_probs=92.1
Q ss_pred CcceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHc--CCcccEEEecCCchhhhcChhhhhhhh-eecccccccccc
Q psy5665 50 ISYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQL--GLTLKYVINTHVHADHITGTGKIKTMY-VINTHVHADHIT 125 (344)
Q Consensus 50 ~~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~--~~~i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d~~~ 125 (344)
+...|||+|.+ ++++|||||.. ..+.+.+.+++. ..+|++|++||.|.||+||+..+.+.+ .+.++.+...
T Consensus 32 g~~~n~~li~~---~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~-- 106 (402)
T 1e5d_A 32 GTTYNAYLVED---EKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLG-- 106 (402)
T ss_dssp CEEEEEEEECS---SSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHH--
T ss_pred CcceEEEEEEC---CCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHCCCCEEEEChHH--
Confidence 34679999984 45899999964 357777888876 446999999999999999999998876 4556655443
Q ss_pred chhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCC-CCCCCceEEEeCCCceeeecce
Q psy5665 126 GTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATP-GHTDGCVTYVNQGEGMAFTGDT 194 (344)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-ght~~~~~~~~~~~~iL~~GD~ 194 (344)
...+...+ . . .......+.+++.+.+|+..++++++| ||++++++++.++.+++|+||+
T Consensus 107 -~~~~~~~~-------~-~-~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~~~~~~l~~GD~ 166 (402)
T 1e5d_A 107 -QKAMESHF-------H-Y-KDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFADEKVLISNDI 166 (402)
T ss_dssp -HHHHHHHH-------C-C-SSCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETT
T ss_pred -HHHHHHHh-------C-C-CCCceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEEEECCCCEEEeccc
Confidence 12222111 0 0 012344566777888888788888887 7888888877777677777775
No 40
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=99.70 E-value=1.4e-21 Score=194.19 Aligned_cols=208 Identities=13% Similarity=0.079 Sum_probs=120.0
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCC--hHHHHHHHHHc--CCcccEEEecCCchhhhcChhhhhhh-----heecccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQ--ADRDVTLINQL--GLTLKYVINTHVHADHITGTGKIKTM-----YVINTHVHA 121 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~--~~~~~~~l~~~--~~~i~~Vi~TH~H~DH~gg~~~~~~~-----~~v~~~~~~ 121 (344)
...|||+|.++ ++++|||||.+. .+.+++.+++. ..+|++||+||.|.||+||+..|.+. ..+.+++|.
T Consensus 131 ~~~N~~lI~~~--~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~ 208 (668)
T 2yhe_A 131 DPANMTIIEGD--SGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPS 208 (668)
Confidence 45799999875 679999999542 35666777652 46799999999999999999999863 455566655
Q ss_pred ccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCC---CceEEEeCCCceeeecceeeec
Q psy5665 122 DHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTD---GCVTYVNQGEGMAFTGDTLLIR 198 (344)
Q Consensus 122 d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~---~~~~~~~~~~~iL~~GD~~~~~ 198 (344)
.... ............+...........+..+..-.++ ..-+... +......++..++-.|
T Consensus 209 ~~~e---~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~-------~~l~~~~~~~~~~~~~~P~~~~~~dg------ 272 (668)
T 2yhe_A 209 GFME---HAVSENILAGTAMARRGQYQSGVMVPRGAQAQVD-------SGLFKTTATNATNTLVAPNVLIEKPY------ 272 (668)
Confidence 4210 0000000000000000000000000000000000 0000000 0001111111111122
Q ss_pred cCCCccccCCCCCceeecCCC-CCCCceeeeecCcceeEecceeeccCccccc-CC---CCCHHHHHHHHHHHHhcC---
Q psy5665 199 GCGRTDFQQGGSGVPVRATPG-HTDGCVTYVNQGEGMAFTGDTLLIRGCGRTD-FQ---QGDSHKLFQSVRKEIFSL--- 270 (344)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~pG-Ht~g~~~~~~~~~~~lf~GD~l~~~~~~~~~-~~---~~~~~~~~~sl~~~l~~l--- 270 (344)
..+++|+..++++++|| |||||+++|.++.+++|+||.++.+ .++.. +. ..+...|.+++ ++++.+
T Consensus 273 ----~~l~lgg~~l~vi~tPG~Htpg~i~~~~p~~~vLftGD~~~~~-~~ni~~~~g~~~~d~~~w~~SL-~~l~~l~~~ 346 (668)
T 2yhe_A 273 ----ERHTVDGVELEFQLTLGSEAPSDMNIYLPQFKVLNTADNAPPA-MHNLLTPRGAEVRDAKAWAGYI-DASLEKYGD 346 (668)
Confidence 23678899999999999 9999999999999999999998753 22221 22 24788899999 688777
Q ss_pred CCceEEeeCCCCC
Q psy5665 271 PDHFRVYPAHDYH 283 (344)
Q Consensus 271 ~~~~~v~pgHg~~ 283 (344)
+++. ++||||.+
T Consensus 347 ~~~~-vvPGHg~p 358 (668)
T 2yhe_A 347 RTDV-LIQQHNWP 358 (668)
Confidence 6776 99999943
No 41
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.80 E-value=1.3e-19 Score=162.41 Aligned_cols=189 Identities=16% Similarity=0.166 Sum_probs=106.5
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCC----------------hHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhh
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQ----------------ADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKT 111 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~----------------~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~ 111 (344)
...|||+|.++ ++.+|||||.+. .+.+.+.|++.|++ |++||+||.|.||+||+..|.+
T Consensus 33 ~~~~~~li~~~--~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~~~ 110 (274)
T 3aj3_A 33 FPVYSILIEHA--EGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYFPH 110 (274)
T ss_dssp EEEEEEEEEET--TEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGCTT
T ss_pred eeEEEEEEEeC--CccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhCCC
Confidence 34699999986 679999999753 24578889998865 8999999999999999999854
Q ss_pred hheeccccccccccchhHHHhhhhhh-HHhhhcccc----cccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCC
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNV-QSIISKESG----AQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGE 186 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~ 186 (344)
. .++++... ...+....... ..+...... ........ .+.. + .. .+..... +.+
T Consensus 111 a---~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~---~~---~~~~~~~-~~~- 169 (274)
T 3aj3_A 111 A---KKICHRSE---VPQACNPQPFEHLGYSDLSFSAEAAEARGATAQ-----LLEG--T---TR---ANSTFEG-IDG- 169 (274)
T ss_dssp S---EEEEETTH---HHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGG-----CCTT--C---CS---TTSCEEE-ECS-
T ss_pred C---EEEECHHH---HHHHhCcCCccccccChhhhccccccccccccc-----cccc--c---cc---CCCCceE-cCC-
Confidence 3 23333322 11111110000 000000000 00000000 0000 0 00 0000011 111
Q ss_pred ceeeecceeeeccCCCccccCCCCCceeecCCCCCCCceeeeec---CcceeEecceeecc-CcccccCC--CCCHHHHH
Q psy5665 187 GMAFTGDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQ---GEGMAFTGDTLLIR-GCGRTDFQ--QGDSHKLF 260 (344)
Q Consensus 187 ~iL~~GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~---~~~~lf~GD~l~~~-~~~~~~~~--~~~~~~~~ 260 (344)
.+++++ .++++.+||||+||++++.+ +.+++|+||+++.. .......+ ..+..++.
T Consensus 170 -----------------~~~l~g-~~~v~~~pGHt~g~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~ 231 (274)
T 3aj3_A 170 -----------------DVDLAR-GVKLISTPGHSIGHYSLLVEFPRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGV 231 (274)
T ss_dssp -----------------SEEEET-TEEEEECTTSSTTCEEEEECCSSSCCEEEEETTCSSHHHHHHTCCCSCCSCHHHHH
T ss_pred -----------------ccccCC-EEEEEECCCCCceeeEEEEECCCCCEEEEEechhhhHHHhcCCCCCceecCHHHHH
Confidence 122344 68888889999999888876 45799999977642 11111112 35788888
Q ss_pred HHHHHHHhcCCCc--eEEeeCCC
Q psy5665 261 QSVRKEIFSLPDH--FRVYPAHD 281 (344)
Q Consensus 261 ~sl~~~l~~l~~~--~~v~pgHg 281 (344)
+|+ ++++.+..+ .+++|||+
T Consensus 232 ~sl-~~l~~l~~~~~~~i~pgH~ 253 (274)
T 3aj3_A 232 NSM-RKVKKLAEDHGAELMYSHD 253 (274)
T ss_dssp HHH-HHHHHHHHHHTCEEEESSC
T ss_pred HHH-HHHHHHHhcCCCEEEecCC
Confidence 998 577776432 35999999
No 42
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.80 E-value=6.2e-20 Score=159.50 Aligned_cols=59 Identities=29% Similarity=0.397 Sum_probs=50.4
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCC-ChHHHHHHHHHcCC---cccEEEecCCchhhhcChhhhhh
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLE-QADRDVTLINQLGL---TLKYVINTHVHADHITGTGKIKT 111 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~-~~~~~~~~l~~~~~---~i~~Vi~TH~H~DH~gg~~~~~~ 111 (344)
..+|||+|.++ ++.+|||||.. ..+.+.+.+++.++ +|++|++||.|.||+||+..|++
T Consensus 33 ~~~n~~li~~~--~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~~ 95 (221)
T 1ztc_A 33 HFSTVVYLEHK--DRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFEN 95 (221)
T ss_dssp CBCCEEEEEET--TEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCTT
T ss_pred CceEEEEEEeC--CeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCCC
Confidence 56799999985 77999999963 45778888998876 48999999999999999998874
No 43
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.79 E-value=4.9e-20 Score=169.88 Aligned_cols=54 Identities=20% Similarity=0.332 Sum_probs=46.2
Q ss_pred eEEEEEEeCCCCeEEEEeCCCC-----ChHHHHHHHHHcCCc---ccEEEecCCchhhhcChhh
Q psy5665 53 THTYILADKLSKECVIIDPVLE-----QADRDVTLINQLGLT---LKYVINTHVHADHITGTGK 108 (344)
Q Consensus 53 ~~~~li~~~~~~~~iLIDtG~~-----~~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~ 108 (344)
.|||+|.++ ++.+|||||.+ ..+.+.+.|++.|++ |++|++||.|.||+||+..
T Consensus 97 ~n~~LI~~~--~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~ 158 (331)
T 1p9e_A 97 VTGYLVNTG--SKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMV 158 (331)
T ss_dssp EEEEEEECS--SCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEE
T ss_pred EEEEEEEEC--CEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccc
Confidence 579999975 67999999965 246688899998875 9999999999999999874
No 44
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.77 E-value=2e-18 Score=154.76 Aligned_cols=57 Identities=21% Similarity=0.278 Sum_probs=47.5
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCCh-----------------------HHHHHHHHHcCCc---ccEEEecCCchhhhcC
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQA-----------------------DRDVTLINQLGLT---LKYVINTHVHADHITG 105 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~-----------------------~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg 105 (344)
..|||+|.++ ++.+|||||.+.. +.+.+.|++.|++ |++|++||.|.||+||
T Consensus 42 ~~~~~li~~~--~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg 119 (276)
T 2r2d_A 42 PVSAYLIQCT--DATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGC 119 (276)
T ss_dssp EEEEEEEECS--SCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTT
T ss_pred eeEEEEEECC--CCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCC
Confidence 3699999986 6699999995422 4577889988774 8999999999999999
Q ss_pred hhhhh
Q psy5665 106 TGKIK 110 (344)
Q Consensus 106 ~~~~~ 110 (344)
+..|.
T Consensus 120 ~~~~~ 124 (276)
T 2r2d_A 120 VEYFG 124 (276)
T ss_dssp GGGCS
T ss_pred hhhCC
Confidence 99883
No 45
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.55 E-value=3.8e-14 Score=126.40 Aligned_cols=126 Identities=13% Similarity=0.207 Sum_probs=88.1
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHc-C-CcccEEEecCCchhhhcChhhhhhh--h---------eeccc
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQADRDVTLINQL-G-LTLKYVINTHVHADHITGTGKIKTM--Y---------VINTH 118 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~-~-~~i~~Vi~TH~H~DH~gg~~~~~~~--~---------~v~~~ 118 (344)
..|||+|..+ ++.+|||||.+.. +.+.+. + .+|++|++||.|.||++|+..|... + .+.++
T Consensus 42 ~~~~~li~~~--~~~iLiD~G~~~~----~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~ 115 (268)
T 1zkp_A 42 ATSGYLFEHD--GFRLLVDCGSGVL----AQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIY 115 (268)
T ss_dssp CBSEEEEEET--TEEEEECCCTTHH----HHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEE
T ss_pred CccEEEEEEC--CcEEEEECCHHHH----HHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEE
Confidence 4799999985 7799999997632 233332 2 3499999999999999999988764 1 24444
Q ss_pred cccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC--CCceeeecceee
Q psy5665 119 VHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ--GEGMAFTGDTLL 196 (344)
Q Consensus 119 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~--~~~iL~~GD~~~ 196 (344)
.+... ...+.... .........+.+++.+++|+..+++++++ |+++++++++. +.+++|+||+..
T Consensus 116 ~~~~~---~~~l~~~~---------~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~~~~~~i~~~~~~i~~~GD~~~ 182 (268)
T 1zkp_A 116 GHTFD---ENGFHSLT---------HEPHTKGIPYNPEETLQIGPFSISFLKTV-HPVTCFAMRITAGNDIVVYSADSSY 182 (268)
T ss_dssp ECSSS---HHHHHTTC---------BTTTEEEEECCTTSCEEETTEEEEEEECC-SSSCCEEEEEEETTEEEEECCSCCC
T ss_pred eCccH---HHHHHhcc---------cCCccceEEecCCCeEEECCEEEEEEECC-CCCCceEEEEEECCeEEEEeCCCCC
Confidence 44332 11121110 00111234567788899999999999998 99999998886 357999999854
No 46
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.53 E-value=1.9e-13 Score=133.77 Aligned_cols=136 Identities=19% Similarity=0.149 Sum_probs=97.9
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCC--hHH--------HHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQ--ADR--------DVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVH 120 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~--~~~--------~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~ 120 (344)
.+.|||+++.+ ++.+|||||... ... ..+.+.....+|++|++||.|.||+||++.+...+.+.++++
T Consensus 20 iG~n~~li~~~--~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~~~pIy~t 97 (555)
T 3zq4_A 20 IGKNTYAVQFQ--DEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGG 97 (555)
T ss_dssp SSCCEEEEEET--TEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTCCCCEEEC
T ss_pred cCCEEEEEEEC--CeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhcCceEEEC
Confidence 35699999986 789999999531 111 145566566679999999999999999999998776666666
Q ss_pred cccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEe--CCCceeeecceee
Q psy5665 121 ADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVN--QGEGMAFTGDTLL 196 (344)
Q Consensus 121 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~--~~~~iL~~GD~~~ 196 (344)
.... ..+....... ..........+..++.+.+|+..++++++++|+++++++.+ ++.+++|+||..+
T Consensus 98 ~~t~---~ll~~~l~~~-----~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~~~~il~tGD~~~ 167 (555)
T 3zq4_A 98 KLAI---GLLRNKLEEH-----GLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKF 167 (555)
T ss_dssp HHHH---HHHHHHHHHH-----STTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEETTEEEEECCSCBC
T ss_pred HHHH---HHHHHHHHHc-----CccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEECCcEEEEeCCCCC
Confidence 5432 2222211110 00011234567889999999999999999999999988777 5678999999865
No 47
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.44 E-value=1.9e-12 Score=127.01 Aligned_cols=63 Identities=22% Similarity=0.438 Sum_probs=52.8
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCC------------------------hHHHHHHHHHcCCc-ccEEEecCCchhhhcC
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQ------------------------ADRDVTLINQLGLT-LKYVINTHVHADHITG 105 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~------------------------~~~~~~~l~~~~~~-i~~Vi~TH~H~DH~gg 105 (344)
++.+|++|+++ ++.+|||||... .+.+++.|++.+++ |++||+||.|.||+||
T Consensus 16 gqg~~~lI~~~--~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHigg 93 (547)
T 2bib_A 16 GGSDAIILESN--GHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGN 93 (547)
T ss_dssp SBCCEEEEEET--TEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTT
T ss_pred CCceEEEEEeC--CeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCC
Confidence 45689999985 789999999541 45678889988875 9999999999999999
Q ss_pred hhhhhhhhee
Q psy5665 106 TGKIKTMYVI 115 (344)
Q Consensus 106 ~~~~~~~~~v 115 (344)
+..+.+.+.+
T Consensus 94 l~~l~~~~~~ 103 (547)
T 2bib_A 94 VDELLSTYPV 103 (547)
T ss_dssp HHHHHHHSCB
T ss_pred HHHHHHhCCc
Confidence 9999887654
No 48
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.43 E-value=6.4e-13 Score=130.50 Aligned_cols=138 Identities=17% Similarity=0.108 Sum_probs=96.9
Q ss_pred CcceEEEEEEeCCCCeEEEEeCCCCCh--H--------HHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhh-----e
Q psy5665 50 ISYTHTYILADKLSKECVIIDPVLEQA--D--------RDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMY-----V 114 (344)
Q Consensus 50 ~~~~~~~li~~~~~~~~iLIDtG~~~~--~--------~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~-----~ 114 (344)
..+.|||+|+.+ ++.+|||||.... + ...+.+.....+|++|++||.|.||+||++.+...+ .
T Consensus 27 eig~n~~li~~~--~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~ 104 (562)
T 3bk2_A 27 EIGKNITVFRFR--DEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESP 104 (562)
T ss_dssp BSSCCEEEEEET--TEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCC
T ss_pred CcCCCEEEEEEC--CeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCC
Confidence 456799999985 7799999994211 1 123455555556999999999999999999998876 5
Q ss_pred eccccccccccchhHHHhhhhhhHHhhhcccc-cccceEccCCCeeEeCC-eeEEEEeCCCCCCCceEEEe--CCCceee
Q psy5665 115 INTHVHADHITGTGKIKTMVNNVQSIISKESG-AQADIHVTHGDTIDFGD-QQLEVRATPGHTDGCVTYVN--QGEGMAF 190 (344)
Q Consensus 115 v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~~i~~~~~pght~~~~~~~~--~~~~iL~ 190 (344)
+.++++.... ..+...+... .... ......+..++.+++|+ ..++++++++|+++++++.+ ++.+++|
T Consensus 105 ~pIy~~~~t~---~~l~~~l~~~-----~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~il~ 176 (562)
T 3bk2_A 105 VPIYGARLTL---GLLRGKLEEF-----GLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVH 176 (562)
T ss_dssp SEEEEEHHHH---HHHHHHHHHT-----TCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETTEEEEE
T ss_pred ceEEeCHHHH---HHHHHHHHHc-----CCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEECCeEEEE
Confidence 6666654431 1121111110 0011 12334577889999999 99999999999999998886 4668999
Q ss_pred ecceeee
Q psy5665 191 TGDTLLI 197 (344)
Q Consensus 191 ~GD~~~~ 197 (344)
+||....
T Consensus 177 tGD~~~~ 183 (562)
T 3bk2_A 177 TGDFKLD 183 (562)
T ss_dssp CCSCCCC
T ss_pred cCCCCCC
Confidence 9998654
No 49
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.41 E-value=5.5e-13 Score=126.91 Aligned_cols=139 Identities=17% Similarity=0.234 Sum_probs=90.0
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCC---cccEEEecCCchhhhcChhhhhhh-heeccccccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGL---TLKYVINTHVHADHITGTGKIKTM-YVINTHVHADHITG 126 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~---~i~~Vi~TH~H~DH~gg~~~~~~~-~~v~~~~~~d~~~~ 126 (344)
.+.|||+|..+ +..+|||||..........++..+. +|++|++||.|.||+||++.+.+. +...++++.....
T Consensus 12 vg~s~~li~~~--~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~t~~- 88 (431)
T 3iek_A 12 VTGSAHLLLAG--GRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVL- 88 (431)
T ss_dssp SSCCCEEEEET--TEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHHHHH-
T ss_pred CCCcEEEEEEC--CeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHHHHH-
Confidence 44599999986 7899999997433322222333333 489999999999999999999875 3455665544321
Q ss_pred hhHHHhhhhhhHHhhhc--cc------ccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC--CCceeeeccee
Q psy5665 127 TGKIKTMVNNVQSIISK--ES------GAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ--GEGMAFTGDTL 195 (344)
Q Consensus 127 ~~~l~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~--~~~iL~~GD~~ 195 (344)
.+...+.+....... .. .......+..++.+++++..++++.+ ||+++++++.+. +.+++|+||..
T Consensus 89 --l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~a-gH~~Gs~~~~i~~~~~~ilfsGD~~ 164 (431)
T 3iek_A 89 --LMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQA-GHLPGSAFVVAQGEGRTLVYSGDLG 164 (431)
T ss_dssp --HHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEEC-CSSTTCEEEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeC-CCCcCceEEEEEECCEEEEEeCCCC
Confidence 111111111111000 00 00123456778888899888887765 999999998885 45799999974
No 50
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.41 E-value=5e-12 Score=125.94 Aligned_cols=138 Identities=20% Similarity=0.154 Sum_probs=88.0
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCCh----HHHHHHHHH---cCCcccEEEecCCchhhhcChhhhhh-hheecccccccc
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQA----DRDVTLINQ---LGLTLKYVINTHVHADHITGTGKIKT-MYVINTHVHADH 123 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~----~~~~~~l~~---~~~~i~~Vi~TH~H~DH~gg~~~~~~-~~~v~~~~~~d~ 123 (344)
+.|||+|..+ +..+|||||.... ......++. ...+|++|++||.|.||+||++.+.. .+...++++...
T Consensus 192 g~s~~lI~~~--~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t 269 (636)
T 2ycb_A 192 GRSCLYLQTP--NSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPT 269 (636)
T ss_dssp SCCEEEEECS--SCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTTCCSCEEECHHH
T ss_pred CCCEEEEEEC--CeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcCCCCeEEEcchH
Confidence 6799999975 6799999996532 122222221 12349999999999999999999987 455566665543
Q ss_pred ccchhHHHhhhhhhHHhhh------cccc------cccceEccCCCeeEe-CCeeEEEEeCCCCCCCceEEEeC--CC--
Q psy5665 124 ITGTGKIKTMVNNVQSIIS------KESG------AQADIHVTHGDTIDF-GDQQLEVRATPGHTDGCVTYVNQ--GE-- 186 (344)
Q Consensus 124 ~~~~~~l~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~~~-g~~~i~~~~~pght~~~~~~~~~--~~-- 186 (344)
.. .+...+........ .... ......+..++.+++ ++..++++ .+||+++++++++. +.
T Consensus 270 ~~---l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~-~~gH~~Gs~~~~i~~~~~~~ 345 (636)
T 2ycb_A 270 RD---LMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLH-NAGHILGSAMAHLHIGDGQH 345 (636)
T ss_dssp HH---HHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEE-ECCSSTTCEEEEEEETTTTT
T ss_pred HH---HHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEe-CCCCCCCcEEEEEEECCCeE
Confidence 21 11111111000000 0000 001245677888898 88888774 67999999998875 55
Q ss_pred ceeeeccee
Q psy5665 187 GMAFTGDTL 195 (344)
Q Consensus 187 ~iL~~GD~~ 195 (344)
+++|+||.-
T Consensus 346 ~ilftGD~~ 354 (636)
T 2ycb_A 346 NMVYTGDFK 354 (636)
T ss_dssp CEEECCSCC
T ss_pred EEEEECCCC
Confidence 799999973
No 51
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.39 E-value=4.2e-12 Score=114.70 Aligned_cols=134 Identities=12% Similarity=0.118 Sum_probs=86.6
Q ss_pred eEEEEEEe--CCCC-eEEEEeCCCCChHHHHHHHHHcC-CcccEEEecCCchhhhcChhhhhhh-----heecccccccc
Q psy5665 53 THTYILAD--KLSK-ECVIIDPVLEQADRDVTLINQLG-LTLKYVINTHVHADHITGTGKIKTM-----YVINTHVHADH 123 (344)
Q Consensus 53 ~~~~li~~--~~~~-~~iLIDtG~~~~~~~~~~l~~~~-~~i~~Vi~TH~H~DH~gg~~~~~~~-----~~v~~~~~~d~ 123 (344)
++||+|.. ++++ ..+|||+|.+..+ ++.+.+ .+|++|++||.|.||++|+..+... ..+.++.+...
T Consensus 63 ~~s~li~~~~~~g~~~~iLID~G~~~~~----~l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~ 138 (293)
T 3md7_A 63 RASLLVERYDAEGNNTVVVIDTGPDFRM----QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLT 138 (293)
T ss_dssp BCEEEEEEECTTCCEEEEEECCCTTHHH----HHHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHH
T ss_pred ccEEEEEecCCCCceeEEEEECCccHHH----HHHhcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHH
Confidence 38899984 3221 7999999976322 344343 4699999999999999999988753 34555555432
Q ss_pred ccchhHHHhhhhhhHHhhh--cccccccceEccCCCeeEeCC----eeEEEEeCCCCCCCceEEEeCCCceeeeccee
Q psy5665 124 ITGTGKIKTMVNNVQSIIS--KESGAQADIHVTHGDTIDFGD----QQLEVRATPGHTDGCVTYVNQGEGMAFTGDTL 195 (344)
Q Consensus 124 ~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~----~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~ 195 (344)
...+...+........ ..........+.+++.+.+++ ..++.+++++++.+++.+.+. +++|+||+.
T Consensus 139 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~--~~~y~gDt~ 211 (293)
T 3md7_A 139 ---RNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG--SVVYCTDVS 211 (293)
T ss_dssp ---HHHHHHHCGGGTSCCTTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET--TEEEECSCS
T ss_pred ---HHHHHHhhhhhhccccccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe--EEEEECCCC
Confidence 2222222211100000 000011234567788999999 999999988665688888887 899999985
No 52
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.37 E-value=5.8e-12 Score=126.45 Aligned_cols=141 Identities=9% Similarity=0.075 Sum_probs=89.8
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCCh----HHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhh------eeccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQA----DRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMY------VINTHVH 120 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~----~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~------~v~~~~~ 120 (344)
.+.|||+|..+ +..+|||||.... ....+.+++...+|++||+||.|.||+||++.+...+ .+.++++
T Consensus 13 v~~n~~LIe~~--~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t 90 (717)
T 2i7x_A 13 GTTVGSVVRFD--NVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYAT 90 (717)
T ss_dssp SSCCCEEEEET--TEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEE
T ss_pred CCCCEEEEEEC--CeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEec
Confidence 56799999985 7799999996531 3333556554447999999999999999999998652 3556655
Q ss_pred cccccchhH-HHhhhhhhHHhhhcc-----c------ccccceEccCCCeeEe----CCeeEEEEeCCCCCCCceEEEeC
Q psy5665 121 ADHITGTGK-IKTMVNNVQSIISKE-----S------GAQADIHVTHGDTIDF----GDQQLEVRATPGHTDGCVTYVNQ 184 (344)
Q Consensus 121 ~d~~~~~~~-l~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~----g~~~i~~~~~pght~~~~~~~~~ 184 (344)
.....-... +.+.+.... ..... . .......+..++.+.+ ++..++++ .+||+++++++.+.
T Consensus 91 ~~t~~l~~~~l~d~~~~~~-~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~-~aGHs~Gs~~~~I~ 168 (717)
T 2i7x_A 91 LPVINLGRVSTIDSYASAG-VIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAY-NAGVCPGGSIWCIS 168 (717)
T ss_dssp HHHHHHHHHHHHHHHHHTT-SSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEE-ECSSSTTCEEEEEE
T ss_pred chhHHHHHHHHHHHHHhhc-cccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEE-CCCCCCCcEEEEEE
Confidence 433111111 111000000 00000 0 0001235667788888 78788775 57999999988874
Q ss_pred --CCceeeeccee
Q psy5665 185 --GEGMAFTGDTL 195 (344)
Q Consensus 185 --~~~iL~~GD~~ 195 (344)
+.+++|+||.-
T Consensus 169 ~~~~~IvytGD~~ 181 (717)
T 2i7x_A 169 TYSEKLVYAKRWN 181 (717)
T ss_dssp CSSCEEEECSSCC
T ss_pred eCCCEEEEECCCC
Confidence 56899999974
No 53
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.35 E-value=1.5e-12 Score=129.56 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=88.4
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCCh--HHHHHHHHH----cCCcccEEEecCCchhhhcChhhhhh-hheeccccccccc
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQA--DRDVTLINQ----LGLTLKYVINTHVHADHITGTGKIKT-MYVINTHVHADHI 124 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~--~~~~~~l~~----~~~~i~~Vi~TH~H~DH~gg~~~~~~-~~~v~~~~~~d~~ 124 (344)
+.|||+|..+ +..+|||||.... ......++. ...+|++|++||.|.||+||++.+.. .+...++++....
T Consensus 196 g~s~~LI~~~--~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~ 273 (640)
T 2xr1_A 196 GRSCFLLSTP--ESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTR 273 (640)
T ss_dssp BCCEEEEECS--SCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTTCCSCEEECHHHH
T ss_pred CCcEEEEEEC--CeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcCCCCeEEECHHHH
Confidence 4799999975 6799999995422 122223321 12248999999999999999999987 5555666655432
Q ss_pred cchhHHHhhhhhhHHhhhc---c-cc--------cccceEccCCCeeEe-CCeeEEEEeCCCCCCCceEEEeC--CC--c
Q psy5665 125 TGTGKIKTMVNNVQSIISK---E-SG--------AQADIHVTHGDTIDF-GDQQLEVRATPGHTDGCVTYVNQ--GE--G 187 (344)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~~---~-~~--------~~~~~~~~~~~~~~~-g~~~i~~~~~pght~~~~~~~~~--~~--~ 187 (344)
. .+...+......... . .. ......+..++.+++ ++..+++ ..+||+++++++++. +. +
T Consensus 274 ~---ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~-~~~GH~~Gs~~~~i~~~~~~~~ 349 (640)
T 2xr1_A 274 D---LMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTF-HNAGHILGSAISHFHIGDGLHN 349 (640)
T ss_dssp H---HHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEE-EECSSSTTCEEEEEEETTTTEE
T ss_pred H---HHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEE-EcCCCCcCcEEEEEEECCceEE
Confidence 1 111111110000000 0 00 012345677888999 8888877 458999999988875 55 7
Q ss_pred eeeecceee
Q psy5665 188 MAFTGDTLL 196 (344)
Q Consensus 188 iL~~GD~~~ 196 (344)
++|+||.-.
T Consensus 350 ilftGD~~~ 358 (640)
T 2xr1_A 350 VVFTGDYKY 358 (640)
T ss_dssp EEECCSCCS
T ss_pred EEEECCCCC
Confidence 999999843
No 54
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.34 E-value=5e-12 Score=126.19 Aligned_cols=147 Identities=16% Similarity=0.126 Sum_probs=91.5
Q ss_pred EEEEecCc--ceEEEEEEeCCCCeEEEEeCCCCChH-----HHHHHH-------HHcCCcccEEEecCCchhhhcChhhh
Q psy5665 44 RQLFDSIS--YTHTYILADKLSKECVIIDPVLEQAD-----RDVTLI-------NQLGLTLKYVINTHVHADHITGTGKI 109 (344)
Q Consensus 44 ~~~~~~~~--~~~~~li~~~~~~~~iLIDtG~~~~~-----~~~~~l-------~~~~~~i~~Vi~TH~H~DH~gg~~~~ 109 (344)
..+.++.. +.|||+|..+ +..+|||||..... .....+ ...+.+|++|++||.|.||+||++.+
T Consensus 191 i~~LG~~~~vg~s~~LI~~~--~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L 268 (651)
T 3af5_A 191 ITGLGGFREVGRSALLVQTD--ESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYL 268 (651)
T ss_dssp EEEEECSSSSSCCEEEEEES--SCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHH
T ss_pred EEEEecCCCCCCcEEEEEEC--CcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHH
Confidence 34444333 5799999986 67999999965321 111111 11125699999999999999999999
Q ss_pred hhh--heeccccccccccchhHHHhhhhhhHHhhhc---c-cc--------cccceEccCCCeeEe-CCeeEEEEeCCCC
Q psy5665 110 KTM--YVINTHVHADHITGTGKIKTMVNNVQSIISK---E-SG--------AQADIHVTHGDTIDF-GDQQLEVRATPGH 174 (344)
Q Consensus 110 ~~~--~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~---~-~~--------~~~~~~~~~~~~~~~-g~~~i~~~~~pgh 174 (344)
... +...++++..... .+...+......... . .. ......+..++.+++ ++..+++ ..+||
T Consensus 269 ~~~~~~~~pIy~t~~t~~---ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~-~~~gH 344 (651)
T 3af5_A 269 FRYNLFDGPIYTTPPTRD---LMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTL-HNAGH 344 (651)
T ss_dssp HHTTCCCSCEEECHHHHH---HHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEE-EECSS
T ss_pred HhcCCCCceEEEcHHHHH---HHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEE-ecCCC
Confidence 863 3556666544321 111111110000000 0 00 001245677888999 8888887 55899
Q ss_pred CCCceEEEeC--CC--ceeeecceee
Q psy5665 175 TDGCVTYVNQ--GE--GMAFTGDTLL 196 (344)
Q Consensus 175 t~~~~~~~~~--~~--~iL~~GD~~~ 196 (344)
+++++++.+. +. +++|+||.-.
T Consensus 345 ~~Gs~~~~i~~~~~~~~ilftGD~~~ 370 (651)
T 3af5_A 345 ILGSAIVHLHIGNGLHNIAITGDFKF 370 (651)
T ss_dssp STTCEEEEEEETTTTTCEEECCSCCC
T ss_pred CcCcEEEEEEECCCceEEEEeCCCCC
Confidence 9999998876 55 8999999844
No 55
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.33 E-value=6.2e-12 Score=112.43 Aligned_cols=119 Identities=14% Similarity=0.135 Sum_probs=73.7
Q ss_pred eEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhh----hh-----eecccccccc
Q psy5665 53 THTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKT----MY-----VINTHVHADH 123 (344)
Q Consensus 53 ~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~----~~-----~v~~~~~~d~ 123 (344)
++++++ . +..+|||||.+.. +.+.....++++|++||.|.||++|+..+.. .+ .+.++.+...
T Consensus 12 ~~~~~i-~---~~~iLiD~G~~~~----~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~ 83 (280)
T 2e7y_A 12 STWIYY-S---PERILFDAGEGVS----TTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGN 83 (280)
T ss_dssp EEEEEE-G---GGTEEEEECTTHH----HHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTC
T ss_pred eEEEEE-C---CcEEEEECCcchH----HHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccH
Confidence 445555 2 4579999997622 2344445569999999999999999998852 12 2555555443
Q ss_pred ccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeC-----CeeEEEEeCCCCCCC--ceEEEeC
Q psy5665 124 ITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFG-----DQQLEVRATPGHTDG--CVTYVNQ 184 (344)
Q Consensus 124 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~i~~~~~pght~~--~~~~~~~ 184 (344)
. .+......................+.+++.+.++ +..++++++ +|+++ ++++.+.
T Consensus 84 ---~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~-~H~~~~~~~g~~i~ 146 (280)
T 2e7y_A 84 ---R-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRT-KHVSSEVSFGYHIF 146 (280)
T ss_dssp ---H-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEEC-CSCSSSCCEEEEEE
T ss_pred ---H-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEc-cCCCCCceEEEEEE
Confidence 1 2222111111000000011133457788899998 788888888 99999 8888764
No 56
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.33 E-value=3.6e-12 Score=112.97 Aligned_cols=126 Identities=15% Similarity=0.076 Sum_probs=85.6
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhh--eeccccccccccchhH
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMY--VINTHVHADHITGTGK 129 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~--~v~~~~~~d~~~~~~~ 129 (344)
.++||+|..+ ++.+|||+|.+. +.+.+. ..+|++|++||.|.||++|+..+.... .+.++.+.....
T Consensus 38 ~~s~~li~~~--~~~iLiD~G~~~---~~~~~~--~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~---- 106 (258)
T 3g1p_A 38 QPCSGVVKFN--DAITLIDAGLHD---LADRWS--PGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQG---- 106 (258)
T ss_dssp CBSEEEEEET--TEEEEECCCCTT---HHHHCC--TTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSC----
T ss_pred cCceEEEEEC--CcEEEEECCchH---HHhhcC--cccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhh----
Confidence 4688999875 789999999542 222221 236999999999999999998886543 244555443320
Q ss_pred HHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCC--Cceeeecceee
Q psy5665 130 IKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQG--EGMAFTGDTLL 196 (344)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~--~~iL~~GD~~~ 196 (344)
+...+ ...........+.+++.+.+++..+++++++ |+++++++.+.. .+++|+||+..
T Consensus 107 ~~~~~-------~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~~~g~~i~~~~~~i~~~GDt~~ 167 (258)
T 3g1p_A 107 CDDLF-------KHPGLLDFSHTVEPFVVFDLQGLQVTPLPLN-HSKLTFGYLLETAHSRVAWLSDTAG 167 (258)
T ss_dssp STTTT-------TSCTTEEEEEECCTTCCEEETTEEEEEEECC-SSSCCEEEEEECSSCEEEEECSCSS
T ss_pred HHHHh-------cCCCccccccccCCCCeEEECCEEEEEEECC-CCCCceEEEEEeCCcEEEEECCCCC
Confidence 00110 0000001124577889999999999999998 999999988864 37999999854
No 57
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.29 E-value=6.5e-12 Score=120.56 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=85.5
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCCh---HHHHHHHHHcCC-cccEEEecCCchhhhcChhhhhhhhe--ecccccccccc
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQA---DRDVTLINQLGL-TLKYVINTHVHADHITGTGKIKTMYV--INTHVHADHIT 125 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~---~~~~~~l~~~~~-~i~~Vi~TH~H~DH~gg~~~~~~~~~--v~~~~~~d~~~ 125 (344)
+.|||+|..+ +..+|||||.... ...+..++..+. +|++|++||.|.||+||++.+..... ..++++.....
T Consensus 24 g~s~~li~~~--~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~ 101 (459)
T 2i7t_A 24 GRSCIILEFK--GRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKA 101 (459)
T ss_dssp SSCEEEEEET--TEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHH
T ss_pred CCCEEEEEEC--CeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHH
Confidence 3799999985 7799999996421 111222222333 48999999999999999999976532 33443332110
Q ss_pred chhHHHhhhhhhHH------hhhc--c-cccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC--CCceeeecce
Q psy5665 126 GTGKIKTMVNNVQS------IISK--E-SGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ--GEGMAFTGDT 194 (344)
Q Consensus 126 ~~~~l~~~~~~~~~------~~~~--~-~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~--~~~iL~~GD~ 194 (344)
-...+...+..... .... . ........+..++.+.+++..++++ .+||+++++++.+. +.+++|+||.
T Consensus 102 l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~-~~GH~~Gs~~~~i~~~~~~il~sGD~ 180 (459)
T 2i7t_A 102 IYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCY-HAGHVLGAAMFMIEIAGVKLLYTGDF 180 (459)
T ss_dssp HHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEE-ECCSSTTCEEEEEEETTEEEEECCSC
T ss_pred HHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEE-eCCCccCcEEEEEEECCcEEEEeCCC
Confidence 01111100000000 0000 0 0001224566778888998777765 57999999998876 4489999998
Q ss_pred eee
Q psy5665 195 LLI 197 (344)
Q Consensus 195 ~~~ 197 (344)
...
T Consensus 181 ~~~ 183 (459)
T 2i7t_A 181 SRQ 183 (459)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 58
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.24 E-value=8.6e-11 Score=106.47 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=74.7
Q ss_pred eEEEEEEeC--CCCeEEEEeCCCCChHHHHHHHHHcC---CcccEEEecCCchhhhcChhhhhhh-------heeccccc
Q psy5665 53 THTYILADK--LSKECVIIDPVLEQADRDVTLINQLG---LTLKYVINTHVHADHITGTGKIKTM-------YVINTHVH 120 (344)
Q Consensus 53 ~~~~li~~~--~~~~~iLIDtG~~~~~~~~~~l~~~~---~~i~~Vi~TH~H~DH~gg~~~~~~~-------~~v~~~~~ 120 (344)
++||+|..+ ++++.+|||+|.+. .+.+.+.+ .+|++|++||.|.||++|+..+... ..+.++.+
T Consensus 20 ~~~~li~~~~~~~~~~iliD~G~~~----~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~ 95 (306)
T 2cbn_A 20 VTAILLNLQHPTQSGLWLFDCGEGT----QHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGP 95 (306)
T ss_dssp BCEEEEECCCSSCCCEEEECCCTTH----HHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEES
T ss_pred CCEEEEEeecCCCCcEEEEECCHHH----HHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcC
Confidence 599999861 02569999999752 24555544 3589999999999999999988763 23344444
Q ss_pred cccccchhHHHhhhhhhHHhhhcc-cccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC
Q psy5665 121 ADHITGTGKIKTMVNNVQSIISKE-SGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ 184 (344)
Q Consensus 121 ~d~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~ 184 (344)
... ...+..... ..... ........+.+++.+.+++..++.++++ |+..++.+.+.
T Consensus 96 ~~~---~~~l~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~-H~~~~~gy~i~ 152 (306)
T 2cbn_A 96 QGI---REFVETALR----ISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLE-HPLECYGYRIE 152 (306)
T ss_dssp TTH---HHHHHHHHH----HTTCCCSSCEEEEECCSEEEEECSSEEEEEEECB-SSSCCEEEEEE
T ss_pred ccH---HHHHHHHHH----hhccCCCceEEEEEcCCCcEeecCCEEEEEEEcc-CCCCccEEEEE
Confidence 332 111211110 00000 0011223466677888898888888887 77777776653
No 59
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.23 E-value=6e-11 Score=112.83 Aligned_cols=138 Identities=19% Similarity=0.185 Sum_probs=85.4
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCCh-------HHHHHHHH-----------------------HcCCcccEEEecCCch
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQA-------DRDVTLIN-----------------------QLGLTLKYVINTHVHA 100 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~-------~~~~~~l~-----------------------~~~~~i~~Vi~TH~H~ 100 (344)
.+.|||+|+.+ ++.+|||||.+.. +.+.+.+. ....+|++|++||.|.
T Consensus 18 ~g~n~~li~~~--~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v~lTH~H~ 95 (429)
T 2az4_A 18 IGGTVIEVAYK--DAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHL 95 (429)
T ss_dssp SSCCEEEEEET--TEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSCH
T ss_pred cCCeEEEEEEC--CeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccCCEEEECCchH
Confidence 45799999985 7799999995421 11111111 1123489999999999
Q ss_pred hhhcChhhhhhhheeccccccccccchhHHHhhhhhhHHhhhcc----cccccceEccCCCeeEeCCeeEEEEeCCCC-C
Q psy5665 101 DHITGTGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKE----SGAQADIHVTHGDTIDFGDQQLEVRATPGH-T 175 (344)
Q Consensus 101 DH~gg~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~i~~~~~pgh-t 175 (344)
||+||++.+.. .+.++++.... ..+.........+.... ........+..++.+.+|+..+++++++ | +
T Consensus 96 DHiggl~~l~~--~~~iy~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~ 169 (429)
T 2az4_A 96 DHSRMINYLDP--AVPLYTLKETK---MILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVD-HDA 169 (429)
T ss_dssp HHHTTGGGBCT--TSCEEEEHHHH---HHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEEECC-CSS
T ss_pred HHhCcHhHhcC--CCCEEECHHHH---HHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEEEEEEECC-CCC
Confidence 99999998875 23344443321 11111110000000000 0112234577788999999999999885 7 8
Q ss_pred CCceEEEeC--CCceeeecceee
Q psy5665 176 DGCVTYVNQ--GEGMAFTGDTLL 196 (344)
Q Consensus 176 ~~~~~~~~~--~~~iL~~GD~~~ 196 (344)
++++++.+. +.+++|+||...
T Consensus 170 ~gs~~~~i~~~~~~i~~tGD~~~ 192 (429)
T 2az4_A 170 YGASALLIRTPDHFITYTGDLRL 192 (429)
T ss_dssp TTCEEEEEEETTEEEEECCSCCS
T ss_pred hhhEEEEEEeCCcEEEECCCccc
Confidence 989888764 568999999854
No 60
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.20 E-value=1.8e-10 Score=105.04 Aligned_cols=120 Identities=13% Similarity=0.074 Sum_probs=73.2
Q ss_pred eEEEEEEe-CCCCeEEEEeCCCCChHHHHHHHHHcCC---cccEEEecCCchhhhcChhhhhhhh-------eecccccc
Q psy5665 53 THTYILAD-KLSKECVIIDPVLEQADRDVTLINQLGL---TLKYVINTHVHADHITGTGKIKTMY-------VINTHVHA 121 (344)
Q Consensus 53 ~~~~li~~-~~~~~~iLIDtG~~~~~~~~~~l~~~~~---~i~~Vi~TH~H~DH~gg~~~~~~~~-------~v~~~~~~ 121 (344)
.|||+|.. ++++..+|||+|.+. ...+.+.+. +|++|++||.|.||++|+..+.... .+.++.+.
T Consensus 19 ~~~~li~~~~~~~~~iLiD~G~~~----~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~ 94 (320)
T 1y44_A 19 VTSVALKLLEERRSVWLFDCGEAT----QHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPK 94 (320)
T ss_dssp BCEEEEEETTTTSEEEEECCCTTH----HHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEEST
T ss_pred CCEEEEEEecCCCcEEEEECCHHH----HHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCH
Confidence 68999987 112679999999752 234444443 4899999999999999999887642 34455443
Q ss_pred ccccchhHHHhhhhhhHHhhhcc-cccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC
Q psy5665 122 DHITGTGKIKTMVNNVQSIISKE-SGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ 184 (344)
Q Consensus 122 d~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~ 184 (344)
.. ...+.... ...... ........+.+++.+++++..+..+++ +|+++++++.+.
T Consensus 95 ~~---~~~l~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~-~H~~~~~gy~i~ 150 (320)
T 1y44_A 95 GI---KAFIETSL----AVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSV-IHGVEAFGYRVQ 150 (320)
T ss_dssp TH---HHHHHHHH----HHTTCCCSSCEEEEECCSEEEEECSSEEEEEEEC-BSSSSBEEEEEE
T ss_pred HH---HHHHHHHH----HhhccCCCCceEEEEcCCCceEecCCEEEEEEEc-cCCCCcceEEEe
Confidence 32 11121111 000000 001123456677788888766655554 688888887764
No 61
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.15 E-value=5.6e-10 Score=100.22 Aligned_cols=68 Identities=19% Similarity=0.283 Sum_probs=53.3
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCc---ccEEEecCCchhhhcChhhhhhhh-eeccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLT---LKYVINTHVHADHITGTGKIKTMY-VINTHVHAD 122 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~---i~~Vi~TH~H~DH~gg~~~~~~~~-~v~~~~~~d 122 (344)
..++||+|+++ ++.+|||||.+ ..+.+.+++.+.+ |++|++||.|.||++|+..|.+.+ .+.++.+..
T Consensus 31 ~~g~s~li~~~--~~~iLiD~G~~--~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~ 102 (284)
T 2p4z_A 31 EHGLSLLLKKG--NKEIVVDTGQS--ENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKE 102 (284)
T ss_dssp CSSCEEEEEET--TEEEEECCCSS--THHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGG
T ss_pred CCEEEEEEEEC--CeEEEEeCCCC--HHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHH
Confidence 45689999985 77999999975 4566778887664 899999999999999999987653 345555543
No 62
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.11 E-value=3.2e-10 Score=98.90 Aligned_cols=116 Identities=20% Similarity=0.263 Sum_probs=73.1
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCC-cccEEEecCCchhhhcChhhhhhh--heeccccccccccchh
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGL-TLKYVINTHVHADHITGTGKIKTM--YVINTHVHADHITGTG 128 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~-~i~~Vi~TH~H~DH~gg~~~~~~~--~~v~~~~~~d~~~~~~ 128 (344)
+.+||+|+.+ +..+|||||.+... + ... ++++|++||.|.||+ |...+... ..+.++.+...
T Consensus 36 g~s~~li~~~--~~~iliDpg~~~~~-----~--~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~----- 100 (235)
T 3kl7_A 36 KHGSLMLTYD--NHSIQVDPVSEYAD-----Y--TTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENS----- 100 (235)
T ss_dssp ETTEEEEEET--TEEEEESCCTTTCC-----T--TSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHH-----
T ss_pred cceEEEEEEC--CEEEEECCCCCccc-----h--hhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHH-----
Confidence 3589999985 77999999965221 1 122 599999999999999 65555542 22233322211
Q ss_pred HHHhhhhhhHHhhhcccccccceEccCCC-eeEeCCeeEEEEeCCCCCC--------C-ceEEEeC--CCceeeecceee
Q psy5665 129 KIKTMVNNVQSIISKESGAQADIHVTHGD-TIDFGDQQLEVRATPGHTD--------G-CVTYVNQ--GEGMAFTGDTLL 196 (344)
Q Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~i~~~~~pght~--------~-~~~~~~~--~~~iL~~GD~~~ 196 (344)
...+ . ....+..++ .+.+|+..++.++++..++ + ...+.+. +.+++|+||+.+
T Consensus 101 --~~~l-------~------~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~ 165 (235)
T 3kl7_A 101 --QKKL-------G------KGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTED 165 (235)
T ss_dssp --HHHH-------T------CSEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCS
T ss_pred --HHHh-------c------CcEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCc
Confidence 1111 0 124567788 8999999999887763322 1 2445443 557889999855
Q ss_pred e
Q psy5665 197 I 197 (344)
Q Consensus 197 ~ 197 (344)
.
T Consensus 166 ~ 166 (235)
T 3kl7_A 166 I 166 (235)
T ss_dssp C
T ss_pred h
Confidence 4
No 63
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.05 E-value=8.1e-10 Score=100.82 Aligned_cols=135 Identities=8% Similarity=0.044 Sum_probs=85.5
Q ss_pred ceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHc----------CCcccEEEecCCchhhhcChhhhhhhheecccccc
Q psy5665 52 YTHTYILADKLSKECVIIDPVLEQADRDVTLINQL----------GLTLKYVINTHVHADHITGTGKIKTMYVINTHVHA 121 (344)
Q Consensus 52 ~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~----------~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~ 121 (344)
.+.|++|+.+ +...+|||+|.+..+ ++.+. ..+|++|++||.|.||++|+..+.....+.++++.
T Consensus 40 ~~ss~li~~~-~~~~iLiD~G~~~~~----~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~~~~~vy~~~ 114 (321)
T 3jxp_A 40 TQSSIALSDD-GVHWILCNASPDIRA----QLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTD 114 (321)
T ss_dssp CBCEEEEESS-SSSEEEECCCTTHHH----HHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGCCEEEEECH
T ss_pred cceEEEEEeC-CceEEEEeCCchHHH----HHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhcCCCeEEECH
Confidence 3578999875 333599999976322 33332 13599999999999999999999876666777665
Q ss_pred ccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEe---CCeeEEEEeCC-------CCCC-----CceEEEeC--
Q psy5665 122 DHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDF---GDQQLEVRATP-------GHTD-----GCVTYVNQ-- 184 (344)
Q Consensus 122 d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~i~~~~~p-------ght~-----~~~~~~~~-- 184 (344)
.. ...+...++.... ............+..++.+.+ ++..++.+.++ .|.+ ..+.+.+.
T Consensus 115 ~~---~~~l~~~~~~f~~-~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~ 190 (321)
T 3jxp_A 115 MV---HQDLTTGFPLFNM-LSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDT 190 (321)
T ss_dssp HH---HHHTTTTSCHHHH-HTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEET
T ss_pred HH---HHHHHhhCccccc-cccccCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEec
Confidence 44 2222222211111 011000012335667888999 99999988886 3653 56677665
Q ss_pred --CCceeeeccee
Q psy5665 185 --GEGMAFTGDTL 195 (344)
Q Consensus 185 --~~~iL~~GD~~ 195 (344)
+.+++|+||+-
T Consensus 191 ~~g~~i~y~~Dt~ 203 (321)
T 3jxp_A 191 RTGGKLFYAPGLG 203 (321)
T ss_dssp TTCCEEEEESSCC
T ss_pred CCCcEEEEECCCC
Confidence 34799999974
No 64
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=98.93 E-value=1.1e-08 Score=95.03 Aligned_cols=56 Identities=21% Similarity=0.257 Sum_probs=44.1
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCC---cccEEEecCCchhhhcChhhhhhh
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGL---TLKYVINTHVHADHITGTGKIKTM 112 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~---~i~~Vi~TH~H~DH~gg~~~~~~~ 112 (344)
.+.+||+|..+ +..+|||||.+. ...+.+.++ +|++|++||.|.||++|+..+...
T Consensus 17 r~~ss~ll~~~--~~~iLiD~G~g~----~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~ 75 (368)
T 3zwf_A 17 RGASAVVLRCE--GECWLFDCGEGT----QTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCT 75 (368)
T ss_dssp SCSSEEEEEET--TEEEEECCCTTH----HHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHH
T ss_pred CCccEEEEEEC--CeEEEEeCChhH----HHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHH
Confidence 34789999975 789999999652 234444443 599999999999999999988765
No 65
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=98.80 E-value=5.9e-09 Score=92.45 Aligned_cols=127 Identities=20% Similarity=0.182 Sum_probs=73.1
Q ss_pred eEEEEEEeCCCCeEEEEeCCCCChH---------------HHH---HHHHHcCCcccEEEecCCchhhhcChhhhhhhhe
Q psy5665 53 THTYILADKLSKECVIIDPVLEQAD---------------RDV---TLINQLGLTLKYVINTHVHADHITGTGKIKTMYV 114 (344)
Q Consensus 53 ~~~~li~~~~~~~~iLIDtG~~~~~---------------~~~---~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~ 114 (344)
++||+|+.. +..+||||+..... .+. -.+++...++++|++||.|.||+++...+.....
T Consensus 12 ha~~li~~~--g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~~~~~ 89 (264)
T 3rpc_A 12 NATGKLTIK--NTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSIPKS 89 (264)
T ss_dssp TTEEEEEET--TEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHHSCTT
T ss_pred CcEEEEEEC--CEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCHHHHhhccC
Confidence 589999985 77999999632100 000 0111111258999999999999999887776554
Q ss_pred eccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCC--------------ceE
Q psy5665 115 INTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDG--------------CVT 180 (344)
Q Consensus 115 v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~--------------~~~ 180 (344)
+.++.+.... ...+... + ......+ ++.+++++..++.+++. |.++ .+.
T Consensus 90 ~~v~~~~~~~--~~~l~~~--g----------~~~~~~~--~~~~~~~~~~i~~~pa~-H~~~~~~~~p~~~~~~~~~~g 152 (264)
T 3rpc_A 90 LPIFVQNTAD--KELITSQ--G----------FIDVRII--FESLEFNGITLRKTGGS-HGTVEMYANPVLAPLAGDAMG 152 (264)
T ss_dssp SCEEESSHHH--HHHHHHT--T----------CSCEEEC--SSEEEETTEEEEEECCC-SSCHHHHTSTTHHHHHCCCCE
T ss_pred CeEEEeCHHH--HHHHHhc--C----------CCeeEEe--cccEEECCEEEEEeccc-cCCccccccccccccccccEE
Confidence 4444441110 1111110 0 0011122 46888998766665542 5553 245
Q ss_pred EEeC---CCceeeecceeeec
Q psy5665 181 YVNQ---GEGMAFTGDTLLIR 198 (344)
Q Consensus 181 ~~~~---~~~iL~~GD~~~~~ 198 (344)
+.+. +.+++|+||+.+..
T Consensus 153 ~~i~~~~~~~i~~~GDt~~~~ 173 (264)
T 3rpc_A 153 VIFEAADEPTVYLVGDTVWTS 173 (264)
T ss_dssp EEEECTTSCCEEECCSCCSCH
T ss_pred EEEEeCCccEEEEECCcCchH
Confidence 5554 45799999986543
No 66
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=98.78 E-value=1.1e-08 Score=94.96 Aligned_cols=109 Identities=15% Similarity=0.072 Sum_probs=71.3
Q ss_pred CeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccccccccchhHHHhhhhhhHHhhhc
Q psy5665 64 KECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISK 143 (344)
Q Consensus 64 ~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 143 (344)
+..++||+... ..-.+|++|++||.|.||+||+.. .+.+.++++... ...+...+..
T Consensus 36 G~~ilVD~f~~----------~~~~~IdaI~lTH~H~DHiggl~~---~~~~pIy~s~~t---~~ll~~~l~~------- 92 (367)
T 4b87_A 36 GTGFTVDAFQY----------GVVEGCTAYFLTHFHSDHYAGLSK---HFTFPVYCSEIT---GNLLKNKLHV------- 92 (367)
T ss_dssp TSSEEESCCSS----------SSCTTCCEEECCCCCHHHHTTCST---TCCSCEEECHHH---HHHHHHHSCC-------
T ss_pred CCeEEEeCCCc----------CCccCCcEEEECcChHHHhCCccc---ccCCcEEECHHH---HHHHHHHhcc-------
Confidence 45799998632 012259999999999999999873 233344444322 1112111110
Q ss_pred ccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeC--CC-ceeeecceeeec
Q psy5665 144 ESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQ--GE-GMAFTGDTLLIR 198 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~--~~-~iL~~GD~~~~~ 198 (344)
.......+..++.+.+++..++++. +||+++++++.+. ++ +++|+||.....
T Consensus 93 --~~~~~~~l~~g~~~~ig~~~v~~~~-agH~~gs~~~~i~~~~g~~il~tGD~~~~~ 147 (367)
T 4b87_A 93 --QEQYIHPLPLDTECIVNGVKVVLLD-ANHCPGAVMILFYLPNGTVILHTGDFRADP 147 (367)
T ss_dssp --CGGGEEECCBTSCEEETTEEEEEEE-CSSSTTCEEEEEECTTSCEEEECCSCCCCG
T ss_pred --ccceEEEeCCCCEEEECCEEEEEEe-CCCcCCcEEEEEEcCCCcEEEEecCcccCc
Confidence 0112245667888999998888877 6899999998884 34 499999986543
No 67
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=98.74 E-value=2.6e-08 Score=93.02 Aligned_cols=131 Identities=18% Similarity=0.228 Sum_probs=74.5
Q ss_pred eEEEEEEeCCCCeEEEEe--CCCCCh----------HHHHHH----------------HHHcCC-cccEEEecCCchhhh
Q psy5665 53 THTYILADKLSKECVIID--PVLEQA----------DRDVTL----------------INQLGL-TLKYVINTHVHADHI 103 (344)
Q Consensus 53 ~~~~li~~~~~~~~iLID--tG~~~~----------~~~~~~----------------l~~~~~-~i~~Vi~TH~H~DH~ 103 (344)
++||+|+.+ ++..+||| +|.+.. .++.+. ++..+. ++++|++||.|.||+
T Consensus 69 ~s~~lI~~~-~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~iD~IliTH~H~DHi 147 (379)
T 3bv6_A 69 CTGIWLKSA-GNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHADHI 147 (379)
T ss_dssp TTEEEEEET-TCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCSGGGC
T ss_pred ccEEEEEeC-CCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCCCCCEEEECCCCcccC
Confidence 579999874 25689999 553311 012111 111123 489999999999999
Q ss_pred c--Chhhhhhhh--eeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCC-------
Q psy5665 104 T--GTGKIKTMY--VINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATP------- 172 (344)
Q Consensus 104 g--g~~~~~~~~--~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p------- 172 (344)
+ ++..+.+.. .+.++..... ...+.. + + ........+..++.+.+++..++++.+.
T Consensus 148 g~~~l~~l~~~~~~~~~v~~~~~~---~~~l~~-~-g--------~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~ 214 (379)
T 3bv6_A 148 DVNVAAAVLQNCGEHVKFIGPQAC---VDLWLG-W-G--------VPQERCIVAKVGDVLEIGDVKIRVLDSFDRTALVT 214 (379)
T ss_dssp CHHHHHHHHHHSCTTCEEEECHHH---HHHHHH-H-T--------CCGGGEEECCTTCEEEETTEEEEEEECCCHHHHTC
T ss_pred ChHHHHHHHhcCCCCcEEEecHHH---HHHHHH-c-C--------CChhhEEEeCCCCEEEECCEEEEEEeccccccccc
Confidence 6 444454432 3334433221 111111 0 0 0011234577789999999888888762
Q ss_pred ---CCC--C---------CceEEEe--CCCceeeecceeee
Q psy5665 173 ---GHT--D---------GCVTYVN--QGEGMAFTGDTLLI 197 (344)
Q Consensus 173 ---ght--~---------~~~~~~~--~~~~iL~~GD~~~~ 197 (344)
+|+ + ..+++.+ ++.+++|+||+...
T Consensus 215 ~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~ 255 (379)
T 3bv6_A 215 LPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYS 255 (379)
T ss_dssp CCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCC
T ss_pred ccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCcc
Confidence 222 2 2456655 35679999998553
No 68
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.67 E-value=4.8e-08 Score=90.55 Aligned_cols=96 Identities=19% Similarity=0.206 Sum_probs=55.0
Q ss_pred cccEEEecCCchhhhc--Chhhhhhhh--eeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCe
Q psy5665 89 TLKYVINTHVHADHIT--GTGKIKTMY--VINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQ 164 (344)
Q Consensus 89 ~i~~Vi~TH~H~DH~g--g~~~~~~~~--~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (344)
+|++|++||.|.||+| ++..+.+.. .+.++..... ...+.. + + ........+..++.+.+++.
T Consensus 109 ~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~---~~~l~~-~-g--------~~~~~~~~l~~g~~~~~g~~ 175 (360)
T 2wyl_A 109 QIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTC---VDLWIG-W-G--------VPKERCIVVKPGDVVKVKDI 175 (360)
T ss_dssp CCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHH---HHHHHH-H-T--------CCGGGEEECCTTCEEEETTE
T ss_pred CCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHH---HHHHHH-c-C--------CChheEEEcCCCCEEEECCE
Confidence 4899999999999996 344444332 2333333211 111111 0 0 00112345777889999998
Q ss_pred eEEEEeCC-----------CCCCC---------ceEEEe--CCCceeeecceeee
Q psy5665 165 QLEVRATP-----------GHTDG---------CVTYVN--QGEGMAFTGDTLLI 197 (344)
Q Consensus 165 ~i~~~~~p-----------ght~~---------~~~~~~--~~~~iL~~GD~~~~ 197 (344)
.++++.+. ||+++ ++.+.+ ++.+++|+||+...
T Consensus 176 ~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~ 230 (360)
T 2wyl_A 176 EIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYS 230 (360)
T ss_dssp EEEEEECCCC------------------CCTTTBEEEEEEETTEEEEECTTCCCC
T ss_pred EEEEEeccCcccccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcC
Confidence 88888763 34333 466655 35679999998653
No 69
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.60 E-value=4.8e-08 Score=84.16 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=60.1
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccccccccchhHH
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGTGKI 130 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~~~l 130 (344)
.+++||+|+.+ +..+|||||.+.. .++....++++|++||.|.||++ +..+...
T Consensus 18 ~~~~~~li~~~--~~~iLiD~g~~~~-----~~~~~~~~id~VliTH~H~DH~~-~~~l~~~------------------ 71 (220)
T 1vjn_A 18 FGHACFALEME--GKTIVTDPFDESV-----GYPIPNVTADVVTESHQHFDHNA-HHLVKGN------------------ 71 (220)
T ss_dssp EETTEEEEEET--TEEEEESCCC----------CCCCCBCSEEECSSCC---CG-GGGCBSS------------------
T ss_pred ccCCEEEEEEC--CEEEEEcCCCCcC-----CCCcCCCCcCEEEECCCCCCCCC-chHhcCC------------------
Confidence 45689999985 7799999996521 12212345999999999999998 5543200
Q ss_pred HhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCC------Cc-eEEEeC--CCceeeecceee
Q psy5665 131 KTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTD------GC-VTYVNQ--GEGMAFTGDTLL 196 (344)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~------~~-~~~~~~--~~~iL~~GD~~~ 196 (344)
.. .+..+..+++++..++.+.++ |.+ +. +.+.+. +.+++|+||+..
T Consensus 72 ------~~-------------vi~~~g~~~~~~~~I~~~~~~-H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~ 126 (220)
T 1vjn_A 72 ------FR-------------VIDRPGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGH 126 (220)
T ss_dssp ------CE-------------EECSSEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCS
T ss_pred ------CE-------------EEcCCCeEEECCEEEEEEeee-cCCCCCccCCCcEEEEEEECCeEEEEeCCCCC
Confidence 00 001123567888788877765 544 23 556554 457999999844
No 70
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.60 E-value=2.9e-08 Score=87.75 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=49.3
Q ss_pred cceEEEEEEeCCCCeEEEEeCCCCChHHHHHHHHHcCCcc-cEEEecCCchhhhcChhhhhhhheecccccccc
Q psy5665 51 SYTHTYILADKLSKECVIIDPVLEQADRDVTLINQLGLTL-KYVINTHVHADHITGTGKIKTMYVINTHVHADH 123 (344)
Q Consensus 51 ~~~~~~li~~~~~~~~iLIDtG~~~~~~~~~~l~~~~~~i-~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~ 123 (344)
..++||+|+ . +|||||.+. .+++.+++.|+++ ++|++||.|.||+||+..| ..+.++.++..
T Consensus 30 ~~G~s~lie----~--iLiD~G~~~--~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l---~~~~v~~~~~~ 92 (267)
T 3h3e_A 30 EHGFSVLVD----S--VLFDTGKSD--VFLKNARKLGIDLPKDVLISHGHYDHAGGLLYL---SGKRVWLRKEA 92 (267)
T ss_dssp CSSCEEEET----T--EEECCCSSS--HHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC---CSCEEEEEGGG
T ss_pred CcEeHHeee----e--EEEECCCcH--HHHHHHHHCCcCcCCEEEECCCChhhhCCHHHh---cCCEEEECHHH
Confidence 456899995 2 999999763 6888999998877 9999999999999999998 33445555443
No 71
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=98.56 E-value=3.7e-07 Score=83.53 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=65.1
Q ss_pred EEEEeCCCCChHHHHHHHHHcCCcccEEEecCCchhhhcChhhhhhhheeccccccccccchhHHHhhhhhhHHhhhccc
Q psy5665 66 CVIIDPVLEQADRDVTLINQLGLTLKYVINTHVHADHITGTGKIKTMYVINTHVHADHITGTGKIKTMVNNVQSIISKES 145 (344)
Q Consensus 66 ~iLIDtG~~~~~~~~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~~~~~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 145 (344)
.+.||+... . ...+|++||+||.|.||+||++.+. .+.++++... ...+...+....
T Consensus 11 ~i~vD~f~~--~--------~~~~i~ai~lTH~H~DHiggl~~l~---~~pVy~s~~t---~~ll~~~l~~~~------- 67 (336)
T 3zdk_A 11 PIAVDFWSL--R--------RAGTARLFFLSHMHSDHTVGLSSTW---ARPLYCSPIT---AHLLHRHLQVSK------- 67 (336)
T ss_dssp SEEESCCCH--H--------HHCSSCEEECCCCCGGGSTTCSTTC---CSCEEECHHH---HHHHHHHHCCCT-------
T ss_pred CEeecCCcc--c--------CCCCCCEEEECCChHHHHCchHHHc---CCCEEecHHH---HHHHHHhhhhcc-------
Confidence 588887631 1 1125999999999999999998864 2444444332 122222111000
Q ss_pred ccccceEccCCCee-------EeCCeeEEEEeCCCCCCCceEEEeC--CCceeeecceee
Q psy5665 146 GAQADIHVTHGDTI-------DFGDQQLEVRATPGHTDGCVTYVNQ--GEGMAFTGDTLL 196 (344)
Q Consensus 146 ~~~~~~~~~~~~~~-------~~g~~~i~~~~~pght~~~~~~~~~--~~~iL~~GD~~~ 196 (344)
.....+..++.+ .+|+..++++.+ +|.++++++.+. +.+++|+||.-.
T Consensus 68 --~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~~-~H~~gs~~~~i~~~~~~i~~tGD~~~ 124 (336)
T 3zdk_A 68 --QWIQALEVGESHVLPLDEIGQETMTVTLLDA-NHCPGSVMFLFEGYFGTILYTGDFRY 124 (336)
T ss_dssp --TTEEECCTTSEEEEESSSSSSCEEEEEEEEC-SSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred --cceEecCCCCeEEecCcccccCCEEEEEEEC-CCCcceEEEEEEeCCceEEEeCCCCC
Confidence 011222233333 457788888888 789999998885 457999999843
No 72
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.24 E-value=2.4e-07 Score=81.88 Aligned_cols=93 Identities=13% Similarity=0.165 Sum_probs=63.2
Q ss_pred heeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeec
Q psy5665 113 YVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTG 192 (344)
Q Consensus 113 ~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~G 192 (344)
+++.+|.|.||+++...+.+++|+++.+.++.......... +. + .. ....+.+ |
T Consensus 82 ~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~--------~~--------~---~~-~~~~~~~------g 135 (262)
T 3hnn_A 82 YVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAAF--------PD--------D---NL-NILPMRG------K 135 (262)
T ss_dssp EEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHHHHS--------SS--------S---CC-EEEECCS------S
T ss_pred EEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHHh--------CC--------C---CC-ceEEeCC------C
Confidence 57889999999999999988877766665543211111000 00 0 00 0111111 2
Q ss_pred ceeeeccCCCccccCC-CCCceeecCCC-CCCCceeeeecCcceeEeccee
Q psy5665 193 DTLLIRGCGRTDFQQG-GSGVPVRATPG-HTDGCVTYVNQGEGMAFTGDTL 241 (344)
Q Consensus 193 D~~~~~~~~~~~~~~~-~~~~~~~~~pG-Ht~g~~~~~~~~~~~lf~GD~l 241 (344)
..+++| +..++++.+|| ||||+++++.++++++|+||++
T Consensus 136 ----------~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~~~~~~lfsGD~~ 176 (262)
T 3hnn_A 136 ----------ETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIF 176 (262)
T ss_dssp ----------CEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTT
T ss_pred ----------CEEEcCCCcEEEEEECCCCCCCCeeEEEeCCCCEEEEeecC
Confidence 236677 78899999999 9999999999999999999984
No 73
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=97.20 E-value=4.6e-05 Score=68.17 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=33.2
Q ss_pred ccCCCCCceeecCCCCCCCceeeeecCcceeEecceeec
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLI 243 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~ 243 (344)
+.+|+..++++++||||+||++++.+.....++|+.++.
T Consensus 167 ~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~~~~~~~l~g 205 (303)
T 4ax1_B 167 VSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYA 205 (303)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEC
T ss_pred EEECCeEEEEEeCCCCCccceEEEEEecCCCceeEEEEe
Confidence 566788899999999999999999887777788887763
No 74
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=97.03 E-value=0.00023 Score=62.36 Aligned_cols=23 Identities=39% Similarity=0.628 Sum_probs=19.6
Q ss_pred hheeccccccccccchhHHHhhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMV 134 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~ 134 (344)
.+++.+|.|.||+++...+.+.+
T Consensus 48 ~~Il~TH~H~DH~gg~~~l~~~~ 70 (254)
T 1xm8_A 48 TYILNTHHHYDHTGGNLELKDRY 70 (254)
T ss_dssp CEEECSSCCHHHHTTHHHHHHHH
T ss_pred cEEEECCCCCcccccHHHHHHHc
Confidence 45889999999999998887765
No 75
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=96.88 E-value=0.00056 Score=65.31 Aligned_cols=81 Identities=25% Similarity=0.389 Sum_probs=50.5
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
.+++.||.|.||+.+...+.+.+ +++.+.++..... +... ..+.... .+. .
T Consensus 74 ~~Il~TH~H~DH~gg~~~l~~~~-~a~v~~~~~~~~~----------~~~~-----------~~~~~~~-~~~------~ 124 (466)
T 3r2u_A 74 THAAETHIHADFASGIRDVAIKL-NANIYVSGESDDT----------LGYK-----------NMPNHTH-FVQ------H 124 (466)
T ss_dssp EEEECSSCCSSSCCCHHHHHHHH-CCEEEEECCSCTT----------TSCC-----------SCCTTCE-EEC------T
T ss_pred eEEEECCCChhhhccHHHHHHhh-CCeEEECcchhhh----------hccc-----------cCCCCCE-EeC------C
Confidence 35889999999999999888775 4444444321110 0000 0000011 111 1
Q ss_pred cceeeeccCCCccccCCCCCceeecCCCCCCCceeeeecC
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQG 231 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~~ 231 (344)
|| .+.+|+..+++++|||||+||++|+.+.
T Consensus 125 g~----------~l~~g~~~l~vi~tPGHT~g~~~~~~~~ 154 (466)
T 3r2u_A 125 ND----------DIYVGNIKLKVLHTPGHTPESISFLLTD 154 (466)
T ss_dssp TC----------EEEETTEEEEEEECCSSSTTCEEEEEEC
T ss_pred CC----------EEEECCEEEEEEECCCCCCCCEEEEEcC
Confidence 22 3566788899999999999999999764
No 76
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=96.68 E-value=0.00031 Score=62.89 Aligned_cols=26 Identities=38% Similarity=0.705 Sum_probs=23.2
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ 230 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~ 230 (344)
+.+|+..++++++||||+||++|+.+
T Consensus 132 l~~g~~~i~vi~tPGHT~g~~~~~~~ 157 (298)
T 4efz_A 132 LALGALSIRAMHTPGHTPACMTYVVT 157 (298)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEEE
T ss_pred EEECCEEEEEEECCCCCcccEEEEEC
Confidence 56678889999999999999999965
No 77
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=96.58 E-value=0.00072 Score=60.09 Aligned_cols=23 Identities=35% Similarity=0.515 Sum_probs=19.8
Q ss_pred hheeccccccccccchhHHHhhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMV 134 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~ 134 (344)
.+++.+|.|.||+++...+.+.+
T Consensus 72 ~~Ii~TH~H~DH~gg~~~l~~~~ 94 (289)
T 4ad9_A 72 QEIVVTHWHRDHSGGIGDICKSI 94 (289)
T ss_dssp EEEECSCSSHHHHTTHHHHHHHS
T ss_pred eEEEEcCCCCcccccHHHHHHhh
Confidence 45889999999999999888765
No 78
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=96.50 E-value=0.00084 Score=64.18 Aligned_cols=81 Identities=23% Similarity=0.383 Sum_probs=49.4
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
.+++.+|.|.||+.+...+.+.+ +++.+.++...... ... .. +......+.+
T Consensus 53 ~~Il~TH~H~DH~gg~~~l~~~~-~~~i~~~~~~~~~~------------~~~------~~---~~~~~~~~~~------ 104 (474)
T 3tp9_A 53 VAALETHIHADFVSGAREMADRA-GAAICVSDEGPPEW------------KSE------YV---KAYPHRLLKD------ 104 (474)
T ss_dssp EEEECSSCCSSSCCCHHHHHHHH-CCEEEEECCSCGGG------------CCG------GG---GGSSEEEECT------
T ss_pred EEEEcCcCchhhhCCHHHHHHHH-CCcEEEcCcchhhh------------ccc------cc---ccccceECCC------
Confidence 35889999999999999888764 44444443211100 000 00 0000011111
Q ss_pred cceeeeccCCCccccCCCCCceeecCCCCCCCceeeeec
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATPGHTDGCVTYVNQ 230 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~pGHt~g~~~~~~~ 230 (344)
|| .+.+|+..+++++|||||+||++|+.+
T Consensus 105 g~----------~~~~g~~~i~~i~tPGHt~g~~~~~~~ 133 (474)
T 3tp9_A 105 GD----------ELHFGNVRIVVMHTPGHTPEHVSYLLY 133 (474)
T ss_dssp TC----------EEEETTEEEEEEECCSSSSSCEEEEEE
T ss_pred CC----------EEEECCEEEEEEECCCCCCCCEEEEEe
Confidence 22 356678889999999999999999865
No 79
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=96.29 E-value=0.0039 Score=52.89 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=35.6
Q ss_pred eeEeCCeeEEEEeC-CCCCCCceEEEeCCCceeeecceeeecc
Q psy5665 158 TIDFGDQQLEVRAT-PGHTDGCVTYVNQGEGMAFTGDTLLIRG 199 (344)
Q Consensus 158 ~~~~g~~~i~~~~~-pght~~~~~~~~~~~~iL~~GD~~~~~~ 199 (344)
.+.+++..++++++ ||||+++++++.++.++|| ||.++...
T Consensus 130 ~~~l~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf-gd~l~~~~ 171 (227)
T 3iog_A 130 DFTLQEGKVRAFYAGPAHTPDGIFVYFPDEQVLY-GGCILKEK 171 (227)
T ss_dssp CEEETTTTEEEECCCCSSSSSCCEEEETTTTEEE-CGGGSCSS
T ss_pred eEEEcCcEEEEEecCCCCCCCcEEEEecCCCEEE-cccccccC
Confidence 47888888999997 9999999999999999999 88766543
No 80
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=96.18 E-value=0.00079 Score=60.25 Aligned_cols=29 Identities=31% Similarity=0.527 Sum_probs=24.6
Q ss_pred EEEEeCCCCCCCceEEEeCCCceeeecce
Q psy5665 166 LEVRATPGHTDGCVTYVNQGEGMAFTGDT 194 (344)
Q Consensus 166 i~~~~~pght~~~~~~~~~~~~iL~~GD~ 194 (344)
++++++|||+++++++++++.++||+||+
T Consensus 153 l~~i~~pGHt~g~~~~~~~~~~~lf~GD~ 181 (303)
T 2vw8_A 153 LQVIEAHGHSDDHVVFYDVRRRRLFCGDA 181 (303)
T ss_dssp EEEEECTTSSTTCEEEEETTTTEEEEETT
T ss_pred EEEEECCCCCcccEEEEECCCCEEEEcCc
Confidence 46788889999999888888888999985
No 81
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=96.04 E-value=0.0014 Score=56.61 Aligned_cols=47 Identities=28% Similarity=0.393 Sum_probs=39.3
Q ss_pred cceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeeecceee
Q psy5665 149 ADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFTGDTLL 196 (344)
Q Consensus 149 ~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~GD~~~ 196 (344)
....+.+++.+.+|+..+ ++.+|||+++++++++++.++||+||++.
T Consensus 138 ~~~~~~~g~~~~~g~~~v-~~~~pGHt~g~~~~~~~~~~~lf~GD~~~ 184 (243)
T 4hl2_A 138 ANGWVEPATAPNFGPLKV-FYPGPGHTSDNITVGIDGTDIAFGGCLIK 184 (243)
T ss_dssp TTSBBCGGGSTTCTTEEE-ECCCSSSSTTCCEEEETTTTEEECTTTCC
T ss_pred cceEecCCCeEEECCEEE-EeCCCCCCcCCEEEEEcCCCEEEEcceee
Confidence 345567788888898777 66899999999999999999999999743
No 82
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=95.91 E-value=0.0018 Score=60.61 Aligned_cols=133 Identities=13% Similarity=0.147 Sum_probs=84.8
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
.+++.+|.|.||+++...+.+.+|+++.+.++......... ++. + ... ...+.+
T Consensus 79 ~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~--------~~~--------~---~~~-~~~~~~------ 132 (414)
T 2q9u_A 79 KYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKIL--------YGM--------E---KAT-WLIVDD------ 132 (414)
T ss_dssp CEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHHHH--------HCC--------T---TCC-EEECCT------
T ss_pred CEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHHHH--------hCC--------C---CCe-eEEeCC------
Confidence 35889999999999999888877766665554321111000 000 0 000 011111
Q ss_pred cceeeeccCCCccccCCCCCceeecCC-CCCCCceeeeecCcceeEecceeeccCcccccCC------------------
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATP-GHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQ------------------ 252 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~p-GHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~------------------ 252 (344)
| ..+.+|+..++++.+| |||+||++++.++.+++|+||.+.........+.
T Consensus 133 g----------~~~~lg~~~~~~~~~p~gHt~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (414)
T 2q9u_A 133 K----------YTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTAN 202 (414)
T ss_dssp T----------CCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHH
T ss_pred C----------CEEEECCeEEEEEeCCCCCCCCceEEEECCCeEEEEccccccccCcccccccccchhhHHHHHHHHHHH
Confidence 2 2366778889999999 9999999999988999999995432111111011
Q ss_pred --CCCHHHHHHHHHHHHhcCCCceEEeeCCCC
Q psy5665 253 --QGDSHKLFQSVRKEIFSLPDHFRVYPAHDY 282 (344)
Q Consensus 253 --~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~ 282 (344)
+.....+.+++ +++..++++. ++||||.
T Consensus 203 ~~~~~~~~~~~sl-~~l~~l~~~~-i~pgHg~ 232 (414)
T 2q9u_A 203 ILGLFSAQMRKAL-EVASTVEIKY-ILSAHGV 232 (414)
T ss_dssp HTTTCHHHHHHHH-HHHHTSCCSE-EEESSSC
T ss_pred heehHHHHHHHHH-HHHhCCCCCE-EECCCcC
Confidence 12234456777 6899999886 9999993
No 83
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=95.85 E-value=0.0018 Score=60.31 Aligned_cols=133 Identities=15% Similarity=0.176 Sum_probs=83.1
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
.+++.+|.|.||+++...+.+.+|+.+.+.++......... ++ .+ +.. ...+..
T Consensus 73 ~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~--------~~--------~~---~~~-~~~~~~------ 126 (402)
T 1e5d_A 73 DYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMESH--------FH--------YK---DWP-VQVVKH------ 126 (402)
T ss_dssp CEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHHHH--------HC--------CS---SCC-EEEECT------
T ss_pred CEEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHHHH--------hC--------CC---CCc-eEEcCC------
Confidence 35889999999999999888877666655544321111100 01 00 000 111111
Q ss_pred cceeeeccCCCccccCCCCCceeecCC-CCCCCceeeeecCcceeEecceeeccCcccccCCC-----------------
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATP-GHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQ----------------- 253 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~p-GHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~----------------- 253 (344)
| ..+.+|+..++++.+| |||+|+++++.+..+++|+||++.........++.
T Consensus 127 g----------~~~~~g~~~~~~~~~p~gH~~~~~~~~~~~~~~l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (402)
T 1e5d_A 127 G----------ETLSLGKRTVTFYETRMLHWPDSMVSWFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMREYYAN 196 (402)
T ss_dssp T----------CEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHH
T ss_pred C----------CEEEECCCEEEEEeCCCCCCCCcEEEEECCCCEEEecccccCccccccccccccchhHHHHHHHHHHHH
Confidence 2 2356778899999999 99999999999989999999985432111111221
Q ss_pred --CCHHHH-HHHHHHHHhc--CCCceEEeeCCCC
Q psy5665 254 --GDSHKL-FQSVRKEIFS--LPDHFRVYPAHDY 282 (344)
Q Consensus 254 --~~~~~~-~~sl~~~l~~--l~~~~~v~pgHg~ 282 (344)
++.... .+++ ++++. ++.+. ++||||.
T Consensus 197 ~~~~~~~~~~~~l-~~l~~~~l~~~~-i~p~Hg~ 228 (402)
T 1e5d_A 197 IVNPYAPQTLKAI-ETLVGAGVAPEF-ICPDHGV 228 (402)
T ss_dssp HTGGGHHHHHHHH-HHHHHTTCCCSE-EEESSSC
T ss_pred hhhhhHHHHHHHH-HHHHhCCCCcCE-EecCCcc
Confidence 111222 3455 78888 88876 9999994
No 84
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=95.81 E-value=0.0013 Score=58.36 Aligned_cols=43 Identities=21% Similarity=0.371 Sum_probs=33.3
Q ss_pred ccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCcc
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCG 247 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~ 247 (344)
+.+|+..++++.+||||+||++++.+...-.++++.+|.+...
T Consensus 162 ~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~~~~~~~lf~GD~~ 204 (294)
T 3m8t_A 162 VTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSGT 204 (294)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCC
T ss_pred EEeCCEEEEEEeCCCCCccCEEEEEEccCCCccceEEEEcCcc
Confidence 5667888999999999999999997643334567888875543
No 85
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=95.73 E-value=0.0015 Score=61.23 Aligned_cols=128 Identities=16% Similarity=0.145 Sum_probs=79.1
Q ss_pred hheeccccccccccchhHHHhhh-hhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMV-NNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAF 190 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~ 190 (344)
.+++.+|.|+||+++...+.+++ |++..+.++......... ++.... ..+.
T Consensus 91 dyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~--------~~~~~~--------------~~v~------ 142 (410)
T 4dik_A 91 THIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLEGF--------YGIKDV--------------TVVK------ 142 (410)
T ss_dssp CEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHH--------HCCCCE--------------EECC------
T ss_pred CEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhh--------cCccce--------------eEec------
Confidence 46899999999999988887765 344444333211110000 000000 1112
Q ss_pred ecceeeeccCCCccccCCCCCceeecCCC-CCCCceeeeecCcceeEecceeeccCcccccCCCC--C------------
Q psy5665 191 TGDTLLIRGCGRTDFQQGGSGVPVRATPG-HTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQG--D------------ 255 (344)
Q Consensus 191 ~GD~~~~~~~~~~~~~~~~~~~~~~~~pG-Ht~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~~--~------------ 255 (344)
.||. +++|+..++++.||| ||||+++++. +++||+||++....++...+... .
T Consensus 143 dGd~----------l~lG~~~L~~i~tPg~H~p~~~~~y~--~~iLFsgD~fg~h~~~~~~~d~~~~~~e~~~~~~~~yy 210 (410)
T 4dik_A 143 DGEE----------REIGGKKFKFVMTPWLHWPDTMVTYL--DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKYI 210 (410)
T ss_dssp TTCE----------EEETTEEEEEEECTTSSSTTCEEEEE--TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHHHHH
T ss_pred CCCE----------EeecceEEEEecCCCCCCCCCeeEEe--CCceEccccccccccCccccccchhhHHHHHHHHHHHH
Confidence 2333 667888999999999 9999999997 58999999754322322211111 0
Q ss_pred -------HHHHHHHHHHHHhcCCCceEEeeCCC
Q psy5665 256 -------SHKLFQSVRKEIFSLPDHFRVYPAHD 281 (344)
Q Consensus 256 -------~~~~~~sl~~~l~~l~~~~~v~pgHg 281 (344)
.....+++ ++++.|+.++ |+||||
T Consensus 211 ~~i~~p~~~~v~~~L-~kl~~Ldi~~-I~P~HG 241 (410)
T 4dik_A 211 VTVIGHYKNYILEGA-EKLSSLKIKA-LLPGHG 241 (410)
T ss_dssp HHHHGGGHHHHHHHH-HHHHTSCCSE-EEESSS
T ss_pred HhhccchHHHHHHHH-HHHhCCCCCE-EecCCc
Confidence 11123445 7899999998 999999
No 86
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=95.70 E-value=0.002 Score=59.90 Aligned_cols=134 Identities=14% Similarity=0.172 Sum_probs=83.7
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
.+++.+|.|.||+++...+.+.+|+.+.+.+.......... ++. + ......+.+
T Consensus 74 ~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~--------~~~--------~----~~~~~~~~~------ 127 (398)
T 1ycg_A 74 DYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLKAH--------YSH--------I----DFNYTIVKT------ 127 (398)
T ss_dssp SEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHHHH--------TCS--------C----CCEEEECCT------
T ss_pred CEEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHHHHHHH--------hCC--------C----CcceEEeCC------
Confidence 35888999999999999888877766655544221111000 010 0 000111111
Q ss_pred cceeeeccCCCccccCCCCCceeecCC-CCCCCceeeeecCcceeEecceeeccCcccccCCC-----------------
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATP-GHTDGCVTYVNQGEGMAFTGDTLLIRGCGRTDFQQ----------------- 253 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~p-GHt~g~~~~~~~~~~~lf~GD~l~~~~~~~~~~~~----------------- 253 (344)
|| .+.+|+..++++.+| |||+|+++++.++.+++|+||++.........+..
T Consensus 128 g~----------~~~~g~~~~~~~~~p~gH~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 197 (398)
T 1ycg_A 128 GT----------SVSLGKRSLTFIEAPMLHWPDSMFTYVPEEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAAKYYAN 197 (398)
T ss_dssp TC----------EEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHH
T ss_pred CC----------EEeeCCcEEEEEeCCCCCCCCcEEEEECCCcEEEeccccccccCccccccccccHHHHHHHHHHHHHH
Confidence 22 356778899999999 89999999999889999999985332121111221
Q ss_pred --C-CHHHHHHHHHHHHhc--CCCceEEeeCCCCC
Q psy5665 254 --G-DSHKLFQSVRKEIFS--LPDHFRVYPAHDYH 283 (344)
Q Consensus 254 --~-~~~~~~~sl~~~l~~--l~~~~~v~pgHg~~ 283 (344)
+ ....+.+++ ++++. ++.+. ++||||+.
T Consensus 198 ~~~~~~~~~~~~l-~~l~~~~l~~~~-i~p~Hg~~ 230 (398)
T 1ycg_A 198 ILMPFSNLITKKL-DEIQKINLAIKT-IAPSHGII 230 (398)
T ss_dssp HTGGGHHHHHHHH-HHHHHTTCCCSE-EEESSSCB
T ss_pred hhhhhHHHHHHHH-HHHhhCCCCccE-EECCCchh
Confidence 0 112223555 78888 88876 99999943
No 87
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=94.68 E-value=0.0018 Score=64.38 Aligned_cols=45 Identities=13% Similarity=-0.022 Sum_probs=41.2
Q ss_pred ccCCCeeEeCCeeEEEEeCCC-CCCCceEEEeCCCceeeecceeee
Q psy5665 153 VTHGDTIDFGDQQLEVRATPG-HTDGCVTYVNQGEGMAFTGDTLLI 197 (344)
Q Consensus 153 ~~~~~~~~~g~~~i~~~~~pg-ht~~~~~~~~~~~~iL~~GD~~~~ 197 (344)
..+++.+.+|+..++++++|| |+++++++++++.++||+||++..
T Consensus 269 ~~dg~~l~lgg~~l~vi~tPG~Htpg~i~~~~p~~~vLftGD~~~~ 314 (668)
T 2yhe_A 269 EKPYERHTVDGVELEFQLTLGSEAPSDMNIYLPQFKVLNTADNAPP 314 (668)
Confidence 457889999999999999999 999999999999999999999763
No 88
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=95.48 E-value=0.0019 Score=60.22 Aligned_cols=135 Identities=17% Similarity=0.173 Sum_probs=85.2
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhcccccccceEccCCCeeEeCCeeEEEEeCCCCCCCceEEEeCCCceeee
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISKESGAQADIHVTHGDTIDFGDQQLEVRATPGHTDGCVTYVNQGEGMAFT 191 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pght~~~~~~~~~~~~iL~~ 191 (344)
.+++.+|.|.||+++...+.+.+|+++.+.++.......... + .+. ......+.+
T Consensus 77 ~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~~~~~~--------~--------~~~---~~~~~~~~~------ 131 (404)
T 2ohh_A 77 DYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLKHY--------P--------SLR---EAEFMTVKT------ 131 (404)
T ss_dssp CEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHHHHHHC--------G--------GGG---GSCEEECCT------
T ss_pred CEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHHHHHHh--------c--------ccc---cCCceEcCC------
Confidence 357889999999999998888777666655542211110000 0 000 000011111
Q ss_pred cceeeeccCCCccccCCCCCceeecCC-CCCCCceeeeecCcceeEeccee--eccCcccccC--C--------------
Q psy5665 192 GDTLLIRGCGRTDFQQGGSGVPVRATP-GHTDGCVTYVNQGEGMAFTGDTL--LIRGCGRTDF--Q-------------- 252 (344)
Q Consensus 192 GD~~~~~~~~~~~~~~~~~~~~~~~~p-GHt~g~~~~~~~~~~~lf~GD~l--~~~~~~~~~~--~-------------- 252 (344)
| ..+.+++..++++.+| |||+||++++.+..+++|+||++ +....+...- +
T Consensus 132 g----------~~~~~g~~~i~~~~~p~gH~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (404)
T 2ohh_A 132 G----------DVLDLGGKTLTFLETPLLHWPDSMFTLLDEDGILFSNDAFGQHLCCPQRLDREIPEYILMDAARKFYAN 201 (404)
T ss_dssp T----------CEEECSSCEEEEEECTTSSSTTCEEEEEETTTEEECTTTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHH
T ss_pred C----------CEEEECCEEEEEEeCCCCCCCCceEEEECCCcEEEecCccccCcCcccccccccchHHHHHHHHHHHHH
Confidence 2 2356678889999999 99999999999889999999987 3222221110 0
Q ss_pred --CCCHHHHHHHHHHHHhcCCC----ceEEeeCCCCC
Q psy5665 253 --QGDSHKLFQSVRKEIFSLPD----HFRVYPAHDYH 283 (344)
Q Consensus 253 --~~~~~~~~~sl~~~l~~l~~----~~~v~pgHg~~ 283 (344)
+.....+.+++ ++++.++. +. ++||||+.
T Consensus 202 ~~~~~~~~~~~sl-~~l~~l~~~~~~~~-i~pgHg~~ 236 (404)
T 2ohh_A 202 LITPLSKLVLKKF-DEVKELGLLERIQM-IAPSHGQI 236 (404)
T ss_dssp HTGGGHHHHHHHH-HHHHHTTCGGGCSE-EECSSSCB
T ss_pred HHHHHHHHHHHHH-HHHhcCCCCccccE-EecCCCcc
Confidence 01123456788 68999988 55 99999953
No 89
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=95.33 E-value=0.0031 Score=53.88 Aligned_cols=40 Identities=23% Similarity=0.196 Sum_probs=33.9
Q ss_pred CeeEeCCeeEEEE-eCCCCCCCceEEEeCCCceeeecceee
Q psy5665 157 DTIDFGDQQLEVR-ATPGHTDGCVTYVNQGEGMAFTGDTLL 196 (344)
Q Consensus 157 ~~~~~g~~~i~~~-~~pght~~~~~~~~~~~~iL~~GD~~~ 196 (344)
..+.+++..++++ ++|||++++++++.++.++||+||++.
T Consensus 121 ~~~~l~~~~i~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~ 161 (228)
T 1jjt_A 121 VNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIK 161 (228)
T ss_dssp SCCEEETTTEEEECCCCSSSTTCCEEEETTTTEEEEETTCC
T ss_pred cceEecCceEEEEecCCCCCCCcEEEEECCCcEEEEecccc
Confidence 3445667789997 899999999999999899999999853
No 90
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=95.30 E-value=0.0029 Score=53.74 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=20.8
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIIS 142 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~ 142 (344)
.+++.+|.|.||+++...+.+ ++++.+.+
T Consensus 66 ~~vi~TH~H~DH~gg~~~~~~--~~~~v~~~ 94 (223)
T 1m2x_A 66 IMNIATHSHDDRAGGLEYFGK--IGAKTYST 94 (223)
T ss_dssp EEEECSSSSTTTTTTHHHHHH--TTCEEEEE
T ss_pred EEEEeccCCccccCchhhHhh--CCCeEEEc
Confidence 468899999999998887765 34444433
No 91
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=95.24 E-value=0.0012 Score=64.25 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=32.7
Q ss_pred ccCCCCCceeecCCCCCCCceeeee--cCcceeEecceeec
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVN--QGEGMAFTGDTLLI 243 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~--~~~~~lf~GD~l~~ 243 (344)
+.+++..++++.+++|++|+++++. +..+++|+||+.+.
T Consensus 128 ~~ig~~~v~~~~~~H~~pgs~~~~i~~~~~~il~tGD~~~~ 168 (555)
T 3zq4_A 128 VKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFD 168 (555)
T ss_dssp EEETTEEEEEEEEBCSSSSEEEEEEEETTEEEEECCSCBCC
T ss_pred EEECCEEEEEEeCCCCCcCcEEEEEEECCcEEEEeCCCCCC
Confidence 5567788999999999999988875 66789999998764
No 92
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=95.05 E-value=0.0039 Score=52.69 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=20.7
Q ss_pred ccCCCCCceeec-CCCCCCCceeee
Q psy5665 205 FQQGGSGVPVRA-TPGHTDGCVTYV 228 (344)
Q Consensus 205 ~~~~~~~~~~~~-~pGHt~g~~~~~ 228 (344)
+.+++..++++. +||||+|+++++
T Consensus 123 ~~~g~~~i~~~~~~pgHt~g~~~~~ 147 (219)
T 3l6n_A 123 YRIGGEEFVVDFLGEGHTADNVVVW 147 (219)
T ss_dssp EEETTEEEEEECCCCSSSSSCCEEE
T ss_pred EEECCEEEEEEeCCCCCCCCCEEEE
Confidence 556778899999 899999999986
No 93
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=94.97 E-value=0.0053 Score=59.93 Aligned_cols=39 Identities=18% Similarity=0.010 Sum_probs=32.6
Q ss_pred ccCCC-CCceeecCCCCCCCceeeee--cCcceeEecceeec
Q psy5665 205 FQQGG-SGVPVRATPGHTDGCVTYVN--QGEGMAFTGDTLLI 243 (344)
Q Consensus 205 ~~~~~-~~~~~~~~pGHt~g~~~~~~--~~~~~lf~GD~l~~ 243 (344)
+.+++ ..++++.+++|++|+++|+. +..+++|+||+.+.
T Consensus 142 ~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~il~tGD~~~~ 183 (562)
T 3bk2_A 142 IQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLD 183 (562)
T ss_dssp EEETTTEEEEEEECCCSSSSCEEEEEEETTEEEEECCSCCCC
T ss_pred EEeCCCEEEEEEECCCCCcccEEEEEEECCeEEEEcCCCCCC
Confidence 45566 78999999999999999985 56789999998764
No 94
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=94.87 E-value=0.0032 Score=53.87 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=17.3
Q ss_pred hheeccccccccccchhHHHh
Q psy5665 112 MYVINTHVHADHITGTGKIKT 132 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~ 132 (344)
.+++.+|.|.||+++...+.+
T Consensus 76 ~~ii~TH~H~DH~gg~~~~~~ 96 (232)
T 1a7t_A 76 TTFIPNHWHGDCIGGLGYLQR 96 (232)
T ss_dssp EEEECSSSSHHHHTTHHHHHH
T ss_pred EEEEeCCCCccccCCHHHHHh
Confidence 357889999999998877765
No 95
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=94.34 E-value=0.0039 Score=55.00 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=27.0
Q ss_pred eEEEEeCCCCCCCceEEEeC--CCceeeeccee
Q psy5665 165 QLEVRATPGHTDGCVTYVNQ--GEGMAFTGDTL 195 (344)
Q Consensus 165 ~i~~~~~pght~~~~~~~~~--~~~iL~~GD~~ 195 (344)
.++++++|||+++++++++. +.+++|+||++
T Consensus 176 gi~~~~~pGHt~g~~~~~i~~~~~~vlftGD~~ 208 (280)
T 3esh_A 176 GIKMQHSGGHSFGHTIITIESQGDKAVHMGDIF 208 (280)
T ss_dssp TEEEEECCSSSTTCEEEEEEETTEEEEECGGGS
T ss_pred CEEEEEcCCCCcccEEEEEEECCcEEEEEEccC
Confidence 48889999999999999985 56799999974
No 96
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=94.00 E-value=0.017 Score=50.55 Aligned_cols=41 Identities=22% Similarity=0.377 Sum_probs=34.0
Q ss_pred cCCCeeEeCCeeEEE-EeCCCCCCCceEEEeCCCceeeecceee
Q psy5665 154 THGDTIDFGDQQLEV-RATPGHTDGCVTYVNQGEGMAFTGDTLL 196 (344)
Q Consensus 154 ~~~~~~~~g~~~i~~-~~~pght~~~~~~~~~~~~iL~~GD~~~ 196 (344)
.+++.+..|+ +++ +.+||||+++++++.++.++||+||.+.
T Consensus 159 ~~~~~~~~g~--~~v~~~~pGHt~g~~~~~~~~~~~lf~GD~~~ 200 (265)
T 2y8b_A 159 SSGDVVRFGP--VEVFYPGAAHSGDNLVVYVPAVRVLFGGCAVH 200 (265)
T ss_dssp STTEEEEETT--EEEEECCSSSSTTCCEEEETTTTEEEEETTSC
T ss_pred CCCcEEeecC--EEEEecCCCCCCCCEEEEecCCCEEEEccccc
Confidence 3466677775 555 7899999999999999889999999865
No 97
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=93.30 E-value=0.028 Score=49.04 Aligned_cols=25 Identities=40% Similarity=0.563 Sum_probs=22.0
Q ss_pred ccCCCCCceeecCCCCCCCceeeee
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVN 229 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~ 229 (344)
+.+|+..++++++||||+||++|+.
T Consensus 95 ~~~g~~~~~vi~tPGHt~g~~~~~~ 119 (260)
T 1qh5_A 95 LQVGSLNVKCLATPCHTSGHICYFV 119 (260)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEE
T ss_pred EEECCEEEEEEECCCCCCCCEEEEE
Confidence 5567788999999999999999984
No 98
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=92.87 E-value=0.036 Score=49.51 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=22.3
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhhc
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIISK 143 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 143 (344)
.+++.+|.|.||++++..+.+. +++.+.++
T Consensus 64 ~~Vi~TH~H~DH~gg~~~l~~~--~~~v~~~~ 93 (317)
T 2zo4_A 64 KTILLTHHHPDHYGLSGFFEGL--GARVFLHE 93 (317)
T ss_dssp CEEEESCCSHHHHTTHHHHHHT--TCEEEEEG
T ss_pred CEEEEcCCCCcccccHHHHHhC--CCEEEEcH
Confidence 3588999999999998888764 44454444
No 99
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=92.77 E-value=0.049 Score=45.25 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=28.0
Q ss_pred EEEEeCC-CCCCCceEEEeCCCceeeecceeee
Q psy5665 166 LEVRATP-GHTDGCVTYVNQGEGMAFTGDTLLI 197 (344)
Q Consensus 166 i~~~~~p-ght~~~~~~~~~~~~iL~~GD~~~~ 197 (344)
++++++| ||++++++++.++ ++||+||++..
T Consensus 110 ~~~~~~p~gHt~g~~~~~~~~-~~lf~GD~~~~ 141 (201)
T 2p97_A 110 LKVMELQGSKTPGELALLLEE-TTLITGDLVRA 141 (201)
T ss_dssp EEEEEECSSSSTTEEEEEETT-TEEEECSSEEB
T ss_pred EEEEECCCCCCCCcEEEEEcC-CEEEECccccc
Confidence 7889999 9999999999987 99999998663
No 100
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=92.39 E-value=0.027 Score=49.29 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=18.2
Q ss_pred hheeccccccccccchhHHHhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTM 133 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~ 133 (344)
.+++.+|.|.||++++..+++.
T Consensus 114 ~~Ii~TH~H~DH~gg~~~l~~~ 135 (270)
T 4eyb_A 114 ALAVVTHAHQDKMGGMDALHAA 135 (270)
T ss_dssp EEEEECSSSHHHHTTHHHHHHT
T ss_pred EEEEeCCCChhhcCcHHHHHHC
Confidence 3578999999999998887654
No 101
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=92.20 E-value=0.029 Score=50.91 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=28.8
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec--CcceeEecceee
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ--GEGMAFTGDTLL 242 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~--~~~~lf~GD~l~ 242 (344)
+.+++..++++.+ ||++|+++|+.+ ..+++|+||+-+
T Consensus 86 ~~~g~~~v~~~~~-~H~~gs~~~~i~~~~~~i~~tGD~~~ 124 (336)
T 3zdk_A 86 IGQETMTVTLLDA-NHCPGSVMFLFEGYFGTILYTGDFRY 124 (336)
T ss_dssp SSSCEEEEEEEEC-SSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred cccCCEEEEEEEC-CCCcceEEEEEEeCCceEEEeCCCCC
Confidence 3456677777777 999999999864 457999999754
No 102
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=92.14 E-value=0.048 Score=47.05 Aligned_cols=27 Identities=56% Similarity=0.863 Sum_probs=23.5
Q ss_pred ccCCCCCceeecCCCCCCCceeeeecC
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQG 231 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~~ 231 (344)
+.+++..++++++||||+||++|+.+.
T Consensus 102 ~~~g~~~i~v~~tpGHt~g~~~~~~~~ 128 (245)
T 2gcu_A 102 VSIGDIYLEVRATPGHTAGCVTYVTGE 128 (245)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEECC
T ss_pred EEECCEEEEEEECCCCCCCCEEEEECC
Confidence 566788899999999999999999763
No 103
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=91.93 E-value=0.052 Score=48.68 Aligned_cols=24 Identities=33% Similarity=0.537 Sum_probs=20.0
Q ss_pred hheeccccccccccchhHHHhhhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVN 135 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~ 135 (344)
.+++.+|.|.||+++...+.+.++
T Consensus 86 ~~IllTH~H~DH~gg~~~l~~~~~ 109 (311)
T 2p18_A 86 STILSTHKHWDHSGGNAKLKAELE 109 (311)
T ss_dssp EEEEESSSSHHHHTTHHHHHHHHH
T ss_pred cEEEeCCCCccccCCHHHHHHhhh
Confidence 357889999999999988877664
No 104
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=91.88 E-value=0.058 Score=46.79 Aligned_cols=44 Identities=27% Similarity=0.484 Sum_probs=30.7
Q ss_pred ccCCCCCceeecCCCCCCCceeeeecCcceeEecceeeccCccc
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQGEGMAFTGDTLLIRGCGR 248 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l~~~~~~~ 248 (344)
+.+|+..++++.+||||+||++++.+...-=-.++.+|.+.+..
T Consensus 134 ~~~g~~~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~~ 177 (263)
T 1k07_A 134 VELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGV 177 (263)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCC
T ss_pred EEECCeEEEEEECCCCCCCcEEEEEecccCCceeEEEEECCccc
Confidence 55677889999999999999999875210000026888766544
No 105
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=91.20 E-value=0.076 Score=44.20 Aligned_cols=29 Identities=28% Similarity=0.381 Sum_probs=21.5
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSII 141 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~ 141 (344)
.+++.+|.|.||+++...+.+.+ +++.+.
T Consensus 50 ~~ii~TH~H~DH~gg~~~l~~~~-~~~v~~ 78 (210)
T 2xf4_A 50 MQILLTHGHLDHVGAASELAQHY-GVPVIG 78 (210)
T ss_dssp EEEECSCSCHHHHTTHHHHHHHH-TCCEEC
T ss_pred eEEEECCCChhhhcCHHHHHHHc-CCcEEE
Confidence 35889999999999988887654 334443
No 106
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=90.61 E-value=0.08 Score=45.23 Aligned_cols=20 Identities=40% Similarity=0.478 Sum_probs=17.0
Q ss_pred heeccccccccccchhHHHh
Q psy5665 113 YVINTHVHADHITGTGKIKT 132 (344)
Q Consensus 113 ~~v~~~~~~d~~~~~~~l~~ 132 (344)
+++.+|.|.||+++...+.+
T Consensus 71 ~vi~TH~H~DH~gg~~~l~~ 90 (246)
T 2fhx_A 71 VAINTHFHLDGTGGNEIYKK 90 (246)
T ss_dssp EEECCSSSHHHHTTHHHHHH
T ss_pred EEEeCCCCccccChHHHHhh
Confidence 47889999999999887765
No 107
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=90.37 E-value=0.091 Score=45.65 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=22.8
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ 230 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~ 230 (344)
+.+|+..++++.+||||+||++++.+
T Consensus 145 ~~~g~~~i~~~~~pGHt~g~~~~~~~ 170 (269)
T 1sml_A 145 ITVGGIVFTAHFMAGHTPGSTAWTWT 170 (269)
T ss_dssp EEETTEEEEEEECCSSSTTCEEEEEE
T ss_pred EEECCEEEEEEECCCCCcccEEEEEe
Confidence 56678889999999999999999865
No 108
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=89.77 E-value=0.47 Score=46.91 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=25.7
Q ss_pred CCCCceeecCCCCCCCceeeeec--Cc--ceeEecce
Q psy5665 208 GGSGVPVRATPGHTDGCVTYVNQ--GE--GMAFTGDT 240 (344)
Q Consensus 208 ~~~~~~~~~~pGHt~g~~~~~~~--~~--~~lf~GD~ 240 (344)
++..+++ ..|||++|+++++.. +. +++|+||+
T Consensus 321 gg~~v~~-~~~GH~~Gs~~~~i~~~~~~~~ilftGD~ 356 (640)
T 2xr1_A 321 PDIKLTF-HNAGHILGSAISHFHIGDGLHNVVFTGDY 356 (640)
T ss_dssp TTEEEEE-EECSSSTTCEEEEEEETTTTEEEEECCSC
T ss_pred CCEEEEE-EcCCCCcCcEEEEEEECCceEEEEEECCC
Confidence 4556666 579999999999864 55 79999998
No 109
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=89.56 E-value=0.13 Score=44.65 Aligned_cols=18 Identities=39% Similarity=0.628 Sum_probs=15.2
Q ss_pred heeccccccccccchhHH
Q psy5665 113 YVINTHVHADHITGTGKI 130 (344)
Q Consensus 113 ~~v~~~~~~d~~~~~~~l 130 (344)
+++.+|.|.||+++...+
T Consensus 91 ~VilTH~H~DH~gg~~~~ 108 (274)
T 3aj3_A 91 VVVNSHFHFDHCGGNKYF 108 (274)
T ss_dssp EEECSCCSGGGTTTGGGC
T ss_pred EEEecCcCcccCCchhhC
Confidence 578999999999887655
No 110
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=89.40 E-value=0.14 Score=44.36 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=31.5
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec--CcceeEecceeec
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ--GEGMAFTGDTLLI 243 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~--~~~~lf~GD~l~~ 243 (344)
+.+++..++++.+| |++++++|+.+ +.+++|+||+.+.
T Consensus 144 ~~~g~~~v~~~~~~-H~~~~~~~~i~~~~~~i~~~GD~~~~ 183 (268)
T 1zkp_A 144 LQIGPFSISFLKTV-HPVTCFAMRITAGNDIVVYSADSSYI 183 (268)
T ss_dssp EEETTEEEEEEECC-SSSCCEEEEEEETTEEEEECCSCCCC
T ss_pred EEECCEEEEEEECC-CCCCceEEEEEECCeEEEEeCCCCCC
Confidence 55677889999999 99999999864 4679999998753
No 111
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=88.99 E-value=0.12 Score=44.87 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=22.9
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSII 141 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~ 141 (344)
.+++.+|.|.||+++...+.+.+++++.+.
T Consensus 54 ~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~ 83 (258)
T 2qed_A 54 EAIFLTHHHHDHVGGVKELLQHFPQMTVYG 83 (258)
T ss_dssp EEEECCSCCHHHHTTHHHHHHHCTTCEEEE
T ss_pred CEEEeCCCCccccCCHHHHHHHCCCCEEEe
Confidence 358899999999999988887765444433
No 112
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=87.72 E-value=0.25 Score=42.38 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=21.9
Q ss_pred ccCCCCCceeecCCCCCCCceeeee
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVN 229 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~ 229 (344)
+.+++..++++.+||||+|+++|+.
T Consensus 133 ~~~g~~~i~~~~~pGHt~~~~~~~~ 157 (261)
T 3adr_A 133 FDLGGYRMRLIYTPGHARHHMSVLV 157 (261)
T ss_dssp EECSSSEEEEEECTTSCTTCEEEEE
T ss_pred EEECCEEEEEEECCCCCCccEEEEE
Confidence 5667889999999999999999963
No 113
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=86.91 E-value=0.21 Score=49.61 Aligned_cols=31 Identities=35% Similarity=0.436 Sum_probs=21.9
Q ss_pred heeccccccccccchhHHHhh----hhhhHHhhhc
Q psy5665 113 YVINTHVHADHITGTGKIKTM----VNNVQSIISK 143 (344)
Q Consensus 113 ~~v~~~~~~d~~~~~~~l~~~----~~~~~~~~~~ 143 (344)
+++.+|.|.||+++...+.+. +++++++.++
T Consensus 164 ~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~ 198 (658)
T 2cfu_A 164 TVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPA 198 (658)
T ss_dssp EEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEET
T ss_pred EEEECCCChhhhCCHHHHHhhhhccCCCCEEEEch
Confidence 588999999999998877643 3444444443
No 114
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=86.90 E-value=0.27 Score=40.72 Aligned_cols=30 Identities=17% Similarity=0.398 Sum_probs=21.8
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIIS 142 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~ 142 (344)
.+++.+|.|.||+++...+...+ +++.+++
T Consensus 48 ~~vilTH~H~DH~gg~~~l~~~~-~~~v~~~ 77 (207)
T 2zwr_A 48 LAILLTHAHFDHVGAVAPLVEAL-DLPVYLH 77 (207)
T ss_dssp SCEECSCCCGGGTTTHHHHHHHH-CCCEEEC
T ss_pred cEEEECCCChHHHccHHHHHHHh-CCcEEEC
Confidence 46899999999999988877654 3334333
No 115
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=86.24 E-value=0.36 Score=40.59 Aligned_cols=29 Identities=31% Similarity=0.338 Sum_probs=21.2
Q ss_pred hheeccccccccccchhHHHhhhhhhHHhhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTMVNNVQSIIS 142 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~~~~~~~~~~ 142 (344)
.+++.+|.|.||+++...+.+ ++++.+.+
T Consensus 65 ~~ii~TH~H~DH~gg~~~~~~--~~~~v~~~ 93 (233)
T 3q6v_A 65 NEVINTNYHTDRAGGNAYWKT--LGAKIVAT 93 (233)
T ss_dssp EEEECSSSSHHHHTTHHHHHH--TTCEEEEE
T ss_pred EEEEECCCChhhhChHHHHhh--CCCEEEEc
Confidence 358899999999999888763 34444443
No 116
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=85.84 E-value=0.26 Score=41.46 Aligned_cols=21 Identities=48% Similarity=0.575 Sum_probs=17.7
Q ss_pred heeccccccccccchhHHHhh
Q psy5665 113 YVINTHVHADHITGTGKIKTM 133 (344)
Q Consensus 113 ~~v~~~~~~d~~~~~~~l~~~ 133 (344)
+++.+|.|.||+++...+.+.
T Consensus 81 ~ii~TH~H~DH~gg~~~l~~~ 101 (227)
T 1mqo_A 81 DVIITHAHADRIGGIKTLKER 101 (227)
T ss_dssp EEECCCCSHHHHTTHHHHHHH
T ss_pred EEEeCCCCchhccchHHHhhC
Confidence 588899999999998877654
No 117
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=85.67 E-value=0.39 Score=43.95 Aligned_cols=39 Identities=21% Similarity=0.124 Sum_probs=29.1
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec--Cc-ceeEecceeecc
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ--GE-GMAFTGDTLLIR 244 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~--~~-~~lf~GD~l~~~ 244 (344)
+.+++..++++. +||++|+++|+.. .. +++|+||+.+.+
T Consensus 106 ~~ig~~~v~~~~-agH~~gs~~~~i~~~~g~~il~tGD~~~~~ 147 (367)
T 4b87_A 106 CIVNGVKVVLLD-ANHCPGAVMILFYLPNGTVILHTGDFRADP 147 (367)
T ss_dssp EEETTEEEEEEE-CSSSTTCEEEEEECTTSCEEEECCSCCCCG
T ss_pred EEECCEEEEEEe-CCCcCCcEEEEEEcCCCcEEEEecCcccCc
Confidence 444566677665 8999999999874 33 499999987643
No 118
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=84.69 E-value=0.55 Score=40.39 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=30.5
Q ss_pred cccCCCCCceeecCCCCCCCceeeeecC--cceeEeccee
Q psy5665 204 DFQQGGSGVPVRATPGHTDGCVTYVNQG--EGMAFTGDTL 241 (344)
Q Consensus 204 ~~~~~~~~~~~~~~pGHt~g~~~~~~~~--~~~lf~GD~l 241 (344)
.+.+++..++++.+| |++++++|+... .+++|+||+.
T Consensus 128 ~~~~g~~~v~~~~~~-H~~~~~g~~i~~~~~~i~~~GDt~ 166 (258)
T 3g1p_A 128 VFDLQGLQVTPLPLN-HSKLTFGYLLETAHSRVAWLSDTA 166 (258)
T ss_dssp CEEETTEEEEEEECC-SSSCCEEEEEECSSCEEEEECSCS
T ss_pred eEEECCEEEEEEECC-CCCCceEEEEEeCCcEEEEECCCC
Confidence 356678889999999 999999998753 3699999984
No 119
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=84.34 E-value=0.34 Score=45.77 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=27.8
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec--CcceeEecceee
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ--GEGMAFTGDTLL 242 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~--~~~~lf~GD~l~ 242 (344)
+.+++..++++ .+||++|+++++.. +.+++|+||+..
T Consensus 144 ~~~~gi~v~~~-~~GH~~Gs~~~~i~~~~~~il~sGD~~~ 182 (459)
T 2i7t_A 144 KEVAGIKFWCY-HAGHVLGAAMFMIEIAGVKLLYTGDFSR 182 (459)
T ss_dssp EEETTEEEEEE-ECCSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred EEECCEEEEEE-eCCCccCcEEEEEEECCcEEEEeCCCCC
Confidence 34455555554 78999999999864 457999999864
No 120
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=82.36 E-value=0.49 Score=46.86 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=27.7
Q ss_pred ccC-CCCCceeecCCCCCCCceeeeec--Cc--ceeEeccee
Q psy5665 205 FQQ-GGSGVPVRATPGHTDGCVTYVNQ--GE--GMAFTGDTL 241 (344)
Q Consensus 205 ~~~-~~~~~~~~~~pGHt~g~~~~~~~--~~--~~lf~GD~l 241 (344)
+.+ ++..+++ ..+||++|+++++.. +. +++|+||+-
T Consensus 329 ~~l~ggi~v~~-~~~gH~~Gs~~~~i~~~~~~~~ilftGD~~ 369 (651)
T 3af5_A 329 RDISPDIRLTL-HNAGHILGSAIVHLHIGNGLHNIAITGDFK 369 (651)
T ss_dssp EEEETTEEEEE-EECSSSTTCEEEEEEETTTTTCEEECCSCC
T ss_pred EEecCCEEEEE-ecCCCCcCcEEEEEEECCCceEEEEeCCCC
Confidence 344 5566666 569999999999865 45 799999983
No 121
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=80.94 E-value=0.63 Score=43.57 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=27.4
Q ss_pred ccCCCCCceeecCCCCCCCceeeeec--CcceeEecceee
Q psy5665 205 FQQGGSGVPVRATPGHTDGCVTYVNQ--GEGMAFTGDTLL 242 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~g~~~~~~~--~~~~lf~GD~l~ 242 (344)
+++++..++++. +||++|+++++.. +.+++|+||.-+
T Consensus 127 ~~l~g~~v~~~~-agH~~Gs~~~~i~~~~~~ilfsGD~~~ 165 (431)
T 3iek_A 127 LRLGALSLAFGQ-AGHLPGSAFVVAQGEGRTLVYSGDLGN 165 (431)
T ss_dssp EEETTEEEEEEE-CCSSTTCEEEEEEETTEEEEECCCCCC
T ss_pred EEeCCEEEEEEe-CCCCcCceEEEEEECCEEEEEeCCCCC
Confidence 334555666665 5999999999964 456999999854
No 122
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=80.55 E-value=0.67 Score=41.59 Aligned_cols=70 Identities=24% Similarity=0.382 Sum_probs=53.0
Q ss_pred ceeecCCCCCCCceeeeec--CcceeEecceeecc--CcccccC---CCCCHHHHHHHHHHHHhcC-CCceEEeeCCC
Q psy5665 212 VPVRATPGHTDGCVTYVNQ--GEGMAFTGDTLLIR--GCGRTDF---QQGDSHKLFQSVRKEIFSL-PDHFRVYPAHD 281 (344)
Q Consensus 212 ~~~~~~pGHt~g~~~~~~~--~~~~lf~GD~l~~~--~~~~~~~---~~~~~~~~~~sl~~~l~~l-~~~~~v~pgHg 281 (344)
++++.+||||+||++|+.+ +++++|+||+++.. ...++++ ...+..++.+++++.+..+ +...+++|+|+
T Consensus 226 i~vi~tpGHtpG~~~~~i~~~~~~vlf~GD~~~~~~~~~~~p~~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~~~H~ 303 (331)
T 1p9e_A 226 IKALASHGHTPGHTTYVVESQGQKLALLGDLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHL 303 (331)
T ss_dssp EEEEECTTSSTTCEEEEEEETTEEEEECTTSCCCHHHHTTCTTCCBTTCSSHHHHHHHHHHHHHHHHHHTCEEECTTS
T ss_pred EEEEEcCCCChhCEEEEEEECCcEEEEEECccCcchhcccCCCceecccCCHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 8999999999999999976 67899999998754 2233333 3468888999985444443 34556999999
No 123
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=79.38 E-value=0.72 Score=45.49 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=25.5
Q ss_pred CCCCceeecCCCCCCCceeeeec--Cc--ceeEecce
Q psy5665 208 GGSGVPVRATPGHTDGCVTYVNQ--GE--GMAFTGDT 240 (344)
Q Consensus 208 ~~~~~~~~~~pGHt~g~~~~~~~--~~--~~lf~GD~ 240 (344)
++..+++ ..+||++|+++++.. +. +++|+||+
T Consensus 318 ggi~v~~-~~~gH~~Gs~~~~i~~~~~~~~ilftGD~ 353 (636)
T 2ycb_A 318 PDIRLTL-HNAGHILGSAMAHLHIGDGQHNMVYTGDF 353 (636)
T ss_dssp TTEEEEE-EECCSSTTCEEEEEEETTTTTCEEECCSC
T ss_pred CCeEEEE-eCCCCCCCcEEEEEEECCCeEEEEEECCC
Confidence 4555666 479999999999864 45 79999998
No 124
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=78.82 E-value=3 Score=38.63 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=28.8
Q ss_pred ccCCCCCceeecCCCC-CCCceeeee--cCcceeEecceee
Q psy5665 205 FQQGGSGVPVRATPGH-TDGCVTYVN--QGEGMAFTGDTLL 242 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGH-t~g~~~~~~--~~~~~lf~GD~l~ 242 (344)
+.+++..++++.+ || ++|+++|.. +..+++|+||+.+
T Consensus 153 ~~~g~~~v~~~~~-~H~~~gs~~~~i~~~~~~i~~tGD~~~ 192 (429)
T 2az4_A 153 IKVGEISVEIVPV-DHDAYGASALLIRTPDHFITYTGDLRL 192 (429)
T ss_dssp EEETTEEEEEEEC-CCSSTTCEEEEEEETTEEEEECCSCCS
T ss_pred EEECCEEEEEEEC-CCCChhhEEEEEEeCCcEEEECCCccc
Confidence 4556777888887 58 899999875 4567999999865
No 125
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=77.18 E-value=1.1 Score=37.54 Aligned_cols=62 Identities=24% Similarity=0.190 Sum_probs=47.3
Q ss_pred CceeecCCCCCCCceeeeecCc---ceeEecceeeccCcccccCCCCCHHHHHHH------HHHHHhcCCCceEEeeCCC
Q psy5665 211 GVPVRATPGHTDGCVTYVNQGE---GMAFTGDTLLIRGCGRTDFQQGDSHKLFQS------VRKEIFSLPDHFRVYPAHD 281 (344)
Q Consensus 211 ~~~~~~~pGHt~g~~~~~~~~~---~~lf~GD~l~~~~~~~~~~~~~~~~~~~~s------l~~~l~~l~~~~~v~pgHg 281 (344)
.++++.+||||+|+++++.+.+ +++|+||+++.... ..+..++++| + ++ +.+ .+. ++||||
T Consensus 143 ~~~v~~~pGHt~g~~~~~~~~~~~~~vlftGD~~~~~~~------~~d~~~~~~s~~~~~~l-~~-~~l-~~~-i~pgHg 212 (221)
T 1ztc_A 143 KVKVFHTPWHAREHLSFLLDTENAGRVLITGDITPNRLS------YYDIIKGYGSVQVKNFL-DR-VGR-IDL-LVFPHD 212 (221)
T ss_dssp TEEEEECCSSSTTCEEEEEEETTTEEEEECGGGSCSHHH------HHHHHHTCSCHHHHHHH-HH-HCC-CSE-EECSSS
T ss_pred eEEEEEcCCCCcccEEEEEEcCCCCeEEEEeCccccccc------CCCHHHHHhhhHhHHHH-Hh-ccC-CCE-EEeCCC
Confidence 7899999999999999997654 79999999864322 2345666666 7 45 666 555 999999
Q ss_pred C
Q psy5665 282 Y 282 (344)
Q Consensus 282 ~ 282 (344)
+
T Consensus 213 ~ 213 (221)
T 1ztc_A 213 A 213 (221)
T ss_dssp C
T ss_pred c
Confidence 4
No 126
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=76.02 E-value=1.1 Score=38.07 Aligned_cols=18 Identities=44% Similarity=0.960 Sum_probs=14.9
Q ss_pred heeccccccccccchhHH
Q psy5665 113 YVINTHVHADHITGTGKI 130 (344)
Q Consensus 113 ~~v~~~~~~d~~~~~~~l 130 (344)
+++.+|.|.||+++...+
T Consensus 103 ~VilTH~H~DH~gg~~~~ 120 (254)
T 3dha_A 103 YIISSHLHFDHAGGNGAF 120 (254)
T ss_dssp EEECSCCSHHHHTTGGGC
T ss_pred EEEcCCChhhcCCChHHC
Confidence 578899999999887654
No 127
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=75.35 E-value=1.2 Score=44.54 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=25.7
Q ss_pred CCCCceeecCCCCCCCceeeee--cCcceeEeccee
Q psy5665 208 GGSGVPVRATPGHTDGCVTYVN--QGEGMAFTGDTL 241 (344)
Q Consensus 208 ~~~~~~~~~~pGHt~g~~~~~~--~~~~~lf~GD~l 241 (344)
++..++++ .+||++|+++|.. +..+++|+||+-
T Consensus 147 ggi~V~~~-~aGHs~Gs~~~~I~~~~~~IvytGD~~ 181 (717)
T 2i7x_A 147 DGLTLLAY-NAGVCPGGSIWCISTYSEKLVYAKRWN 181 (717)
T ss_dssp TTEEEEEE-ECSSSTTCEEEEEECSSCEEEECSSCC
T ss_pred CCEEEEEE-CCCCCCCcEEEEEEeCCCEEEEECCCC
Confidence 45566664 6999999999885 466899999963
No 128
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=71.49 E-value=1.2 Score=38.38 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=50.7
Q ss_pred ceeecC-CCCCCCceeeeec--C-cceeEecceeeccC-cccc---cCCCCCHHHHHHHHHHHHhcC---CCceEEeeCC
Q psy5665 212 VPVRAT-PGHTDGCVTYVNQ--G-EGMAFTGDTLLIRG-CGRT---DFQQGDSHKLFQSVRKEIFSL---PDHFRVYPAH 280 (344)
Q Consensus 212 ~~~~~~-pGHt~g~~~~~~~--~-~~~lf~GD~l~~~~-~~~~---~~~~~~~~~~~~sl~~~l~~l---~~~~~v~pgH 280 (344)
++++.+ ||||+||++++.+ + .+++|+||+++... .... .....+..++.+++ ++++.+ ... .++|||
T Consensus 182 ~~v~~~~pgHt~g~~~~~~~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl-~~l~~l~~~~~~-~v~~~H 259 (276)
T 2r2d_A 182 VNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTV-SHIRQYAESRSL-TVLFGH 259 (276)
T ss_dssp EEEEEEESSSSSSEEEEEEECSSSCEEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHH-HHHHHHHHHTTC-EEEESS
T ss_pred EEEEeCCCCCCceeEEEEEEcCCCceEEEEechhhhHHHhcccCCCCccccCHHHHHHHH-HHHHHHHhcCCC-EEEeCC
Confidence 889999 9999999999986 3 68999999987542 2211 11235778888888 577766 344 599999
Q ss_pred C
Q psy5665 281 D 281 (344)
Q Consensus 281 g 281 (344)
+
T Consensus 260 ~ 260 (276)
T 2r2d_A 260 D 260 (276)
T ss_dssp C
T ss_pred C
Confidence 9
No 129
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=63.53 E-value=3.4 Score=35.43 Aligned_cols=20 Identities=45% Similarity=0.600 Sum_probs=16.7
Q ss_pred hheeccccccccccchhHHH
Q psy5665 112 MYVINTHVHADHITGTGKIK 131 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~ 131 (344)
..++.+|.|.||+.+...+.
T Consensus 42 ~~IliTH~H~DH~~gl~~l~ 61 (280)
T 2e7y_A 42 KYVFLTHGHVDHIAGLWGVV 61 (280)
T ss_dssp CEEECSCCCHHHHTTHHHHH
T ss_pred CEEEEeCCchhHHCCHHHHH
Confidence 45889999999999887764
No 130
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=37.13 E-value=9.9 Score=33.03 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=27.7
Q ss_pred ccCCC----CCceeecCCCCCCCceeeeecCcceeEeccee
Q psy5665 205 FQQGG----SGVPVRATPGHTDGCVTYVNQGEGMAFTGDTL 241 (344)
Q Consensus 205 ~~~~~----~~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~l 241 (344)
+.+++ ..++++.++.++.+++.|... +++|+||+.
T Consensus 173 ~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~--~~~y~gDt~ 211 (293)
T 3md7_A 173 FSIEGAGGAIRFEPFSQVHGDIESLGFRIG--SVVYCTDVS 211 (293)
T ss_dssp EEECCTTCCEEEEEEEEEETTEEEEEEEET--TEEEECSCS
T ss_pred EEECCCCCcEEEEEEEecCCCCCEEEEEEe--EEEEECCCC
Confidence 44555 778888888666789998886 899999985
No 131
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=30.73 E-value=48 Score=26.89 Aligned_cols=28 Identities=25% Similarity=0.305 Sum_probs=23.7
Q ss_pred CeEEEEeCCCCChHHHHHHHHHcCCccc
Q psy5665 64 KECVIIDPVLEQADRDVTLINQLGLTLK 91 (344)
Q Consensus 64 ~~~iLIDtG~~~~~~~~~~l~~~~~~i~ 91 (344)
++.++||-|..+...+.++|+++|..+.
T Consensus 3 ~~I~iiD~g~~n~~si~~al~~~G~~~~ 30 (211)
T 4gud_A 3 QNVVIIDTGCANISSVKFAIERLGYAVT 30 (211)
T ss_dssp CCEEEECCCCTTHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCChHHHHHHHHHHCCCEEE
Confidence 4589999998888899999999987643
No 132
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=30.45 E-value=21 Score=32.03 Aligned_cols=21 Identities=14% Similarity=0.001 Sum_probs=15.3
Q ss_pred eEEEEEEeCCCCeEEEEe--CCCC
Q psy5665 53 THTYILADKLSKECVIID--PVLE 74 (344)
Q Consensus 53 ~~~~li~~~~~~~~iLID--tG~~ 74 (344)
++||+|+.+ ++..+||| +|.+
T Consensus 45 ~s~~lI~~~-~g~~iLiDP~~G~g 67 (360)
T 2wyl_A 45 CTGIWLKSE-GGTNVCVDFWCGTG 67 (360)
T ss_dssp TTEEEEECT-TCCEEEESCCCCCC
T ss_pred ccEEEEEeC-CCCEEEEeecCCCC
Confidence 479999873 25699999 5543
No 133
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=24.33 E-value=49 Score=27.47 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=39.2
Q ss_pred ccCCCCCceeecCCCCCC--------C-ceeee--ecCcceeEecceeeccCc---ccccC---C-----CCCHHHHHHH
Q psy5665 205 FQQGGSGVPVRATPGHTD--------G-CVTYV--NQGEGMAFTGDTLLIRGC---GRTDF---Q-----QGDSHKLFQS 262 (344)
Q Consensus 205 ~~~~~~~~~~~~~pGHt~--------g-~~~~~--~~~~~~lf~GD~l~~~~~---~~~~~---~-----~~~~~~~~~s 262 (344)
+.+++..++++.++..++ | .+.|. .++.+++|+||+.+.... +..+. + ..+.++..+
T Consensus 117 ~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~~~~~l~~~Dv~il~~~~~~h~~~~ea~~- 195 (235)
T 3kl7_A 117 TSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEMKDLKDIDIAFLPVNQPYTMTVSQAAK- 195 (235)
T ss_dssp CCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCGGGGGCCSCSEEEEECCTTTSCCHHHHHH-
T ss_pred EEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCchhhHHhhcCCCEEEECCCCCcccCHHHHHH-
Confidence 556777777776553221 1 23444 346679999998765421 11111 0 123443333
Q ss_pred HHHHHhcCCCceEEeeCCC
Q psy5665 263 VRKEIFSLPDHFRVYPAHD 281 (344)
Q Consensus 263 l~~~l~~l~~~~~v~pgHg 281 (344)
.++.+.++. ++|.|-
T Consensus 196 ---~~~~l~~k~-vip~H~ 210 (235)
T 3kl7_A 196 ---AARMFSPKI-LYPYHY 210 (235)
T ss_dssp ---HHHHHCCSE-EEEESC
T ss_pred ---HHHHcCCCE-EEEEcC
Confidence 344456776 888887
No 134
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=21.22 E-value=1.1e+02 Score=27.10 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=24.5
Q ss_pred CCCeEEEEe----CCCCChHHHHHHHHHcCCcccEEEecCC
Q psy5665 62 LSKECVIID----PVLEQADRDVTLINQLGLTLKYVINTHV 98 (344)
Q Consensus 62 ~~~~~iLID----tG~~~~~~~~~~l~~~~~~i~~Vi~TH~ 98 (344)
.++.++||| ||.. .....+.|++.|...-+++.||.
T Consensus 212 ~gk~viIVDDii~TG~T-l~~a~~~L~~~Ga~~v~~~~tH~ 251 (326)
T 3s5j_B 212 KDRVAILVDDMADTCGT-ICHAADKLLSAGATRVYAILTHG 251 (326)
T ss_dssp TTSEEEEEEEEESSCHH-HHHHHHHHHHTTCSEEEEEEEEE
T ss_pred CCCEEEEEccccCCcHH-HHHHHHHHHHcCCCEEEEEEEec
Confidence 345566666 5533 45566778888888778888996
No 135
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=21.06 E-value=44 Score=29.03 Aligned_cols=22 Identities=27% Similarity=0.403 Sum_probs=17.9
Q ss_pred hheeccccccccccchhHHHhh
Q psy5665 112 MYVINTHVHADHITGTGKIKTM 133 (344)
Q Consensus 112 ~~~v~~~~~~d~~~~~~~l~~~ 133 (344)
..++.+|.|.||+.+...+...
T Consensus 57 ~~I~iTH~H~DH~~gl~~l~~~ 78 (320)
T 1y44_A 57 EKIFITHMHGDHVYGLPGLLGS 78 (320)
T ss_dssp EEEECSBCCGGGTTTHHHHHHH
T ss_pred CEEEEeCCChhhhCCHHHHHHH
Confidence 3588899999999988777654
Done!