RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5670
(1269 letters)
>d1fyxa_ c.23.2.1 (A:) Toll-like receptor 2, TLR2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 141 bits (356), Expect = 2e-39
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 9/147 (6%)
Query: 1081 RDKLFDAFVSYSSKDEAFVAEELAPILENGDPAYKLCLHYREFPVGGYIGDTIVQAVESS 1140
R+ +DAFVSYS +D +V + LEN +P +KLCLH R+F G +I D I+ ++E S
Sbjct: 2 RNICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIHGKWIIDNIIDSIEKS 61
Query: 1141 RRTIMVLSENFIKSEWCRYEFKSAHHQVLR-GKKRLIVILLGEVPQKDL---DPDIRLYL 1196
+T+ VLSENF+KSEWC+YE +H ++ I+ILL + +K + +R +
Sbjct: 62 HKTVFVLSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPIEKKAIPQRFCKLRKIM 121
Query: 1197 KSNTYLQW-----GDKLFWEKLKFALP 1218
+ TYL+W + FW L+ A+
Sbjct: 122 NTKTYLEWPMDEAQREGFWVNLRAAIK 148
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 161
Score = 134 bits (337), Expect = 9e-37
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 1080 DRDKLFDAFVSYSSKDEAFVAEELAPILENGDPAYKLCLHYREFPVGGYIGDTIVQAVES 1139
R+ F AF+SYS D +V EL P LE ++CLH R F G I + I+ +E
Sbjct: 8 QRNLQFHAFISYSGHDSFWVKNELLPNLEK--EGMQICLHERNFVPGKSIVENIITCIEK 65
Query: 1140 SRRTIMVLSENFIKSEWCRYEFKSAHHQVLR-GKKRLIVILLGEVPQKDLDP---DIRLY 1195
S ++I VLS NF++SEWC YE AHH + G LI+ILL +PQ + ++
Sbjct: 66 SYKSIFVLSPNFVQSEWCHYELYFAHHNLFHEGSNSLILILLEPIPQYSIPSSYHKLKSL 125
Query: 1196 LKSNTYLQWGD-----KLFWEKLKFALP 1218
+ TYL+W LFW L+ A+
Sbjct: 126 MARRTYLEWPKEKSKRGLFWANLRAAIN 153
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 113 bits (283), Expect = 5e-28
Identities = 69/281 (24%), Positives = 120/281 (42%), Gaps = 16/281 (5%)
Query: 222 NLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNL 281
+ +LDL NN + F L L L L N ++ ++ A L L L LS N L
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 282 VNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSG 341
+P ++ ++L + N I + +FN L Q+IV++L N L + F G
Sbjct: 92 KELPEKMPKTLQEL---RVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 148
Query: 342 LHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNN 401
+ +L + IA + + + L LHL+ N+I + + L+NL L +S N
Sbjct: 149 MKKLSYIRIADTNITTIPQGLPP---SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 205
Query: 402 KLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPK----- 456
+ +++ SL + L L L+NN+L L + +Q +L+ N ++ I
Sbjct: 206 SISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 264
Query: 457 --VLRNLHSLKTLDLGDNLIT--EINNLSLNSLHQLAGLRL 493
S + L N + EI + ++ A ++L
Sbjct: 265 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 112 bits (280), Expect = 1e-27
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 17/309 (5%)
Query: 217 ARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNL 276
RC +LRV+ S+ + +P + L LQ N +T + D L +L L L
Sbjct: 6 FRCQCHLRVVQCSDLGLEKVPKDLPPDT---ALLDLQNNKITEIKDGDFKNLKNLHTLIL 62
Query: 277 SVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNA 336
N + I P F L+ +YL N + L + L +L V NE+T+ +
Sbjct: 63 INNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRV---HENEITKVRKSV 119
Query: 337 ATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTL 396
+V L K + +++ F+ + +L + + + I +I + SL+ LH
Sbjct: 120 FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELH-- 177
Query: 397 IMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPK 456
+ NK+ ++++ SL L L+ L L N + ++ +L N+ L++ HLN NKL ++P
Sbjct: 178 -LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG 236
Query: 457 VLRNLHSLKTLDLGDNLITEINN------LSLNSLHQLAGLRLTENNIS--NISKGVFEK 508
L + ++ + L +N I+ I + +G+ L N + I F
Sbjct: 237 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 296
Query: 509 LSVLTILNL 517
+ V + L
Sbjct: 297 VYVRAAVQL 305
Score = 94.7 bits (234), Expect = 2e-21
Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 32/289 (11%)
Query: 151 STMSLDISHNVFT-------DELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKL 203
T LD+ +N T L++L +L L N I + F PL L L L++N+L
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 204 SNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADH 263
+ + L + N + F+ L+++ + L N L
Sbjct: 92 KELPEKMPKTL---------QELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIE 142
Query: 264 --ALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIV 321
A G+ L+ + ++ N+ IP L L E++L N I + L L
Sbjct: 143 NGAFQGMKKLSYIRIADTNITTIPQGLPPS---LTELHLDGNKITKVDAASLKGLNNLAK 199
Query: 322 LDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIES 381
L LS N ++ + + L L++ NK+ K+ + D +QV++L NN I +
Sbjct: 200 LGLSFNSISAVDNGSLANT--PHLRELHLNNNKLVKVPGGLA-DHKYIQVVYLHNNNISA 256
Query: 382 IHRNTFAS------LSNLHTLIMSNNKLK--RIESNSLDSLTALSVLSL 422
I N F ++ + + +N ++ I+ ++ + + + L
Sbjct: 257 IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 93.6 bits (231), Expect = 4e-21
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 25/290 (8%)
Query: 167 QSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVL 226
LDL N I + D F L++L L L NK+S ++ +F+ + L L
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPL------VKLERL 84
Query: 227 DLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIP- 285
LS N LP + LQEL + N +T + +GLN + V+ L N L +
Sbjct: 85 YLSKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGI 141
Query: 286 -PELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHR 344
F + L + + + +I + G+ L L L N++T V+AA+ GL+
Sbjct: 142 ENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKIT--KVDAASLKGLNN 196
Query: 345 LVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLK 404
L L +++N ++ +D+ + L+ LHL NN++ + + + + NN +
Sbjct: 197 LAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLA-DHKYIQVVYLHNNNIS 255
Query: 405 RIESNS------LDSLTALSVLSLDNNELEY--IEENALKNSTSLQDFHL 446
I SN + S +SL +N ++Y I+ + + L
Sbjct: 256 AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 90.9 bits (224), Expect = 2e-20
Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 11/258 (4%)
Query: 345 LVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLK 404
+L++ NK+ ++ FK+L L L L NN+I I FA L L L +S N+LK
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 405 RIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSL 464
+ +L L V + ++ N L ++ + + L
Sbjct: 93 ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 152
Query: 465 KTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQK 524
+ + D IT I SL + L L N I+ + + L+ L L L+ N I
Sbjct: 153 SYIRIADTNITTIPQGLPPSLTE---LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 209
Query: 525 VEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFD--------YAL 576
V+ G+ N +L + L+ N L + G + + + N + Y
Sbjct: 210 VDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 269
Query: 577 IPADLQWLDIHGNQISEL 594
A + + N +
Sbjct: 270 KKASYSGVSLFSNPVQYW 287
Score = 89.3 bits (220), Expect = 1e-19
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 10/258 (3%)
Query: 369 LQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELE 428
+L L+NN+I I F +L NLHTLI+ NNK+ +I + L L L L N+L+
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 429 YIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQL 488
+ E K L+ K+ + N + L + I N + + +L
Sbjct: 93 ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 152
Query: 489 AGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNY-LT 547
+ +R+ + NI+ I +G+ LT L+L NKI KV+A + +NL + L N
Sbjct: 153 SYIRIADTNITTIPQGLPPS---LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 209
Query: 548 DIGGLFPKLPNLVWLNIS-ENLLEWFDYALIPADLQWLDIHGNQISELGN-----YFEIE 601
G P+L L+++ L++ +Q + +H N IS +G+
Sbjct: 210 VDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 269
Query: 602 SQLRLTYFDASSNKLTEL 619
+ + SN +
Sbjct: 270 KKASYSGVSLFSNPVQYW 287
Score = 82.4 bits (202), Expect = 2e-17
Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 27/298 (9%)
Query: 369 LQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELE 428
L+V+ + +E + ++ + L + NNK+ I+ +L L L L NN++
Sbjct: 12 LRVVQCSDLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 68
Query: 429 YIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQL 488
I A L+ +L+ N+L E+P+ + + L + +N IT++ N L+Q+
Sbjct: 69 KISPGAFAPLVKLERLYLSKNQLKELPEKMPKTL--QELRVHENEITKVRKSVFNGLNQM 126
Query: 489 AGLRL--TENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYL 546
+ L S I G F+ + L+ + +A I + G +L + LDGN +
Sbjct: 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKI 183
Query: 547 TD-IGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLR 605
T L NL L +S N + D + ++H N + +
Sbjct: 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKY 243
Query: 606 LTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLK 663
+ +N ++ + N P K + + V L N ++
Sbjct: 244 IQVVYLHNNNISAIGSNDF----------------CPPGYNTKKASYSGVSLFSNPVQ 285
Score = 80.9 bits (198), Expect = 6e-17
Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 24/280 (8%)
Query: 101 SSLSPGSFQTLIDLKDLSVEFCKIGNLSAGSFRGLRKLKTLTLRTHNTDWSTMSLDISHN 160
+ + G F+ L +L L + KI +S G+F L KL+ L L + + +
Sbjct: 44 TEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTL- 102
Query: 161 VFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCG 220
+ L + N I + ++F L + + L N L S +
Sbjct: 103 ---------QELRVHENEITKVRKSVFNGLNQMIVVELGTNPL----KSSGIENGAFQGM 149
Query: 221 INLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNN 280
L + +++ + ++P L EL+L GN +T + +L GLN+L L LS N+
Sbjct: 150 KKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 281 LVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTE----EWVNA 336
+ + + L+E++L NN + + G+ + + V+ L NN ++ ++
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD-HKYIQVVYLHNNNISAIGSNDFCPP 265
Query: 337 ATFSGLHRLVVLNIAYNKMN--KLDSSIFKDLYRLQVLHL 374
+ +++ N + ++ S F+ +Y + L
Sbjct: 266 GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 63.5 bits (153), Expect = 3e-11
Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 31/190 (16%)
Query: 769 CPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKK 828
CP C C+ V + CS G + ++P +P D L L N+I + F K
Sbjct: 4 CPFRCQCHLRV------VQCSDLGLE-KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKN 56
Query: 829 LQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKII 888
L L L ++ + I F L +L L L N+L E+ + L+ LR + K+
Sbjct: 57 LHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVR 116
Query: 889 YIS-----------------------NRTFLSLTHLKVLQLDHNRITSFAVWHLSSQIQS 925
N F + L +++ IT+ S +
Sbjct: 117 KSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPS-LTE 175
Query: 926 ITLTSNPWSC 935
+ L N +
Sbjct: 176 LHLDGNKITK 185
Score = 63.1 bits (152), Expect = 4e-11
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 3/217 (1%)
Query: 491 LRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIG 550
L L N I+ I G F+ L L L L +NKI K+ G F L + L N L ++
Sbjct: 36 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 95
Query: 551 GLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLR-LTYF 609
PK + ++ +E + +++ N + G ++ L+Y
Sbjct: 96 EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 155
Query: 610 DASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTA 669
+ +T + +P S+ L L N I+KV + NL ++ L N + ++ +
Sbjct: 156 RIADTNITTIPQG-LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 214
Query: 670 LRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVN 706
L +P ++ + + + P + +++Q ++
Sbjct: 215 LANTPHLRELHLNNNKLVKVPGGL-ADHKYIQVVYLH 250
Score = 58.9 bits (141), Expect = 1e-09
Identities = 53/315 (16%), Positives = 103/315 (32%), Gaps = 45/315 (14%)
Query: 606 LTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNI 665
L S L ++ + +P L L NN I++++ F NL + L+ N++ I
Sbjct: 12 LRVVQCSDLGLEKVPKD-LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 70
Query: 666 NQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLL 725
+ A + + E P + +Q L+ + + V +
Sbjct: 71 SPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENE----------ITKVRKSVF 120
Query: 726 YNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANV 785
++ + + + D +T
Sbjct: 121 NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT----------------- 163
Query: 786 IDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNK 845
+P +P TEL+LDGN+I V + S G L L L+ + + + N
Sbjct: 164 ----------TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG 213
Query: 846 TFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTF------LSLT 899
+ L L L++N+L ++ + ++ +YL N I I + F
Sbjct: 214 SLANTPHLRELHLNNNKLVKVP-GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKA 272
Query: 900 HLKVLQLDHNRITSF 914
+ L N + +
Sbjct: 273 SYSGVSLFSNPVQYW 287
Score = 40.0 bits (92), Expect = 0.001
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Query: 797 LPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETI--HNKTFNGLKELI 854
LP ++P EL + N I V F G ++ ++ L ++ +++ N F G+K+L
Sbjct: 94 LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 153
Query: 855 ILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSF 914
+R+ D +T I +L EL+L NKI + + L +L L L N I++
Sbjct: 154 YIRIADTNITTI---PQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 210
Query: 915 AVWHLSSQIQSITLTSNPWSCDCDFTEKF 943
L++ L N
Sbjct: 211 DNGSLANTPHLRELHLNNNKLVKVPGGLA 239
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 76.8 bits (187), Expect = 1e-15
Identities = 57/279 (20%), Positives = 100/279 (35%), Gaps = 12/279 (4%)
Query: 225 VLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVN- 283
++P + Q ++L GN ++ + + +LT+L L N L
Sbjct: 15 TTSCPQQGLQAVPVGIPAAS---QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 284 IPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLH 343
+ + N + + P F+ L +L L L + + F GL
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC--GLQELGPGLFRGLA 129
Query: 344 RLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKL 403
L L + N + L F+DL L L L N+I S+ F L +L L++ N++
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 404 KRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHS 463
+ ++ L L L L N L + AL +LQ LN N +
Sbjct: 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAW 249
Query: 464 LKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNIS 502
L+ + + + +LAG L +++
Sbjct: 250 LQKFRGSS------SEVPCSLPQRLAGRDLKRLAANDLQ 282
Score = 72.9 bits (177), Expect = 2e-14
Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 6/256 (2%)
Query: 269 NSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNE 328
+ L +P + + ++L N I+ + F L +L L +N
Sbjct: 11 EPKVTTSCPQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV 67
Query: 329 LTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFA 388
AA + ++ +D + F L RL LHL+ ++ + F
Sbjct: 68 -LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFR 126
Query: 389 SLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNG 448
L+ L L + +N L+ + ++ L L+ L L N + + E A + SL L+
Sbjct: 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 449 NKLTEI-PKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFE 507
N++ + P R+L L TL L N ++ + +L L L LRL +N
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW-VCDCRARP 245
Query: 508 KLSVLTILNLASNKIQ 523
+ L +S+++
Sbjct: 246 LWAWLQKFRGSSSEVP 261
Score = 63.7 bits (153), Expect = 3e-11
Identities = 45/211 (21%), Positives = 76/211 (36%), Gaps = 5/211 (2%)
Query: 750 NCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELY 809
C L + + + + L+
Sbjct: 54 ACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRL--HTLH 111
Query: 810 LDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGY 869
LD + +G F G LQ L+L + ++ + + TF L L L L NR++ +
Sbjct: 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171
Query: 870 EFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLSS--QIQSIT 927
F L +L L L N++ ++ F L L L L N +++ L+ +Q +
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 928 LTSNPWSCDCDFTEKFRDYLQRSRSSVHDIS 958
L NPW CDC +LQ+ R S ++
Sbjct: 232 LNDNPWVCDCRARP-LWAWLQKFRGSSSEVP 261
Score = 61.8 bits (148), Expect = 1e-10
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 18/268 (6%)
Query: 113 DLKDLSVEFCKIGNLSAGSFRGLRKLKTLTLRTHNTDWSTMSLDISHNVFTDELQSLESL 172
+ + + +I ++ A SFR R L L L ++ + + S
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS---- 88
Query: 173 DLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNS 232
+ ++ A F L L L+L + R L+ L L +N+
Sbjct: 89 --DNAQLRSVDPATFHGLGRLHTLHLDRCG------LQELGPGLFRGLAALQYLYLQDNA 140
Query: 233 FDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQS 292
+LP + F L L L+L GN ++ + + A GL+SL L L N + ++ P F
Sbjct: 141 LQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200
Query: 293 RDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAY 352
L +YL N+++ L L L L L++N + ++ L + +
Sbjct: 201 GRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSS--- 257
Query: 353 NKMNKLDSSIFKDLYRLQVLHLENNQIE 380
+++ S+ + L + L N ++
Sbjct: 258 ---SEVPCSLPQRLAGRDLKRLAANDLQ 282
Score = 61.8 bits (148), Expect = 1e-10
Identities = 49/270 (18%), Positives = 90/270 (33%), Gaps = 14/270 (5%)
Query: 371 VLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLD-NNELEY 429
++++ A+ + + N++ + + S + L++L L N
Sbjct: 15 TTSCPQQGLQAVPVGIPAASQRIF---LHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 430 IEENALKNSTSLQDFHLNGNKLTEI-PKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQL 488
+ Q + +L + P L L TL L + E+ L L
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL 131
Query: 489 AGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTD 548
L L +N + + F L LT L L N+I V F +L + L N +
Sbjct: 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191
Query: 549 IG-GLFPKLPNLVWLNISEN--LLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLR 605
+ F L L+ L + N + LQ+L ++ N +
Sbjct: 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV--CDCRARPLWAW 249
Query: 606 LTYFDASSNKLTELTGNAIPHSVENLFLTN 635
L F SS+++ ++P + L
Sbjct: 250 LQKFRGSSSEVP----CSLPQRLAGRDLKR 275
Score = 40.6 bits (93), Expect = 7e-04
Identities = 43/263 (16%), Positives = 71/263 (26%), Gaps = 33/263 (12%)
Query: 650 PNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKER 709
R+ L GNR+ ++ + R + L ++
Sbjct: 32 AASQRIFLHGNRISHVPAASFR------------------------ACRNLTILWLHSNV 67
Query: 710 NKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTC 769
T L + L+ F + L C +
Sbjct: 68 LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG 127
Query: 770 PNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKL 829
+ + T L L+L GNRI V +F G L
Sbjct: 128 LAALQYLYLQDNALQALPDDTFRDLGNLT--------HLFLHGNRISSVPERAFRGLHSL 179
Query: 830 QILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIY 889
L L+ + V +H F L L+ L L N L+ + L L+ L L N +
Sbjct: 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239
Query: 890 ISNRTFLSLTHLKVLQLDHNRIT 912
L L+ + + +
Sbjct: 240 DCRARPL-WAWLQKFRGSSSEVP 261
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 77.3 bits (189), Expect = 2e-15
Identities = 84/371 (22%), Positives = 148/371 (39%), Gaps = 43/371 (11%)
Query: 226 LDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIP 285
L + ++ + L ++ L + + ++ LN+LT +N S N L +I
Sbjct: 27 TVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDIT 82
Query: 286 P--------ELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAA 337
P ++ + + ++ N N+ +FN I + L +++
Sbjct: 83 PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSN 142
Query: 338 TFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQI-ESIHRNTFASLSNLHTL 396
T S + L L + K L L L + + + A L+NL +L
Sbjct: 143 TISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESL 202
Query: 397 IMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPK 456
I +NN++ I + T L LSL+ N+L+ I L + T+L D L N+++ +
Sbjct: 203 IATNNQISDITPLGIL--TNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLAP 258
Query: 457 VLRNLHSLKTLDLGDNLITEINNLSLNS--------------------LHQLAGLRLTEN 496
L L L L LG N I+ I+ L+ + L L L L N
Sbjct: 259 -LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFN 317
Query: 497 NISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKL 556
NIS+IS L+ L L A+NK+ V + N +N+ + N ++D+ L L
Sbjct: 318 NISDISP--VSSLTKLQRLFFANNKVSDVSS--LANLTNINWLSAGHNQISDLTPLA-NL 372
Query: 557 PNLVWLNISEN 567
+ L +++
Sbjct: 373 TRITQLGLNDQ 383
Score = 75.8 bits (185), Expect = 6e-15
Identities = 77/396 (19%), Positives = 152/396 (38%), Gaps = 39/396 (9%)
Query: 161 VFTDE-LQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARC 219
+FTD L L ++ L ++ L + + ++ + N
Sbjct: 15 IFTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSIDGVEYLN------ 66
Query: 220 GINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSL------TV 273
NL ++ SNN + L++L ++ + N + + A + +
Sbjct: 67 --NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 122
Query: 274 LNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVL-DLSNNELTEE 332
++ + L S + ++ + ++ N +T L L +L+ E +
Sbjct: 123 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 182
Query: 333 WVN----AATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFA 388
N + + L L L N+++ + L L L NQ++ I T A
Sbjct: 183 SSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLA 238
Query: 389 SLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNG 448
SL+NL L ++NN++ + L LT L+ L L N++ I A + + + + N
Sbjct: 239 SLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 296
Query: 449 NKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEK 508
+ NL +L L L N I++I+ +S SL +L L N +S++S
Sbjct: 297 LEDISPI---SNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKVSDVSS--LAN 349
Query: 509 LSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGN 544
L+ + L+ N+I + N + + + L+
Sbjct: 350 LTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 68.5 bits (166), Expect = 1e-12
Identities = 82/395 (20%), Positives = 157/395 (39%), Gaps = 30/395 (7%)
Query: 266 DGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLS 325
L L N+ + + + + I + G+ L L ++ S
Sbjct: 19 TALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKSI-DGVEY-LNNLTQINFS 74
Query: 326 NNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRN 385
NN+LT+ L +LV + + N++ + L +N
Sbjct: 75 NNQLTDI----TPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 130
Query: 386 TFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFH 445
NL+ L +S+N + I + S + + + + L N T+L+
Sbjct: 131 LT----NLNRLELSSNTISDISALSGLTSL-----QQLSFGNQVTDLKPLANLTTLERLD 181
Query: 446 LNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGV 505
++ NK VL L +L++L +N I++I L + L L L N + +I G
Sbjct: 182 ISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GT 236
Query: 506 FEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNIS 565
L+ LT L+LA+N+I + + L ++L N +++I L L L ++
Sbjct: 237 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELN 293
Query: 566 ENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIP 625
EN LE +L +L ++ N IS++ + S +L ++NK+++++ A
Sbjct: 294 ENQLEDISPISNLKNLTYLTLYFNNISDIS---PVSSLTKLQRLFFANNKVSDVSSLANL 350
Query: 626 HSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGN 660
++ L +N IS + P +T++ L
Sbjct: 351 TNINWLSAGHNQISDLTPLANL--TRITQLGLNDQ 383
Score = 67.3 bits (163), Expect = 4e-12
Identities = 63/366 (17%), Positives = 134/366 (36%), Gaps = 40/366 (10%)
Query: 156 DISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFS----F 211
+++ V +L + +L I ++ L +L+ +N + N+L+++
Sbjct: 33 NVTDTVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITPLKNLTKL 90
Query: 212 SNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSL 271
+ I + + L L L+ + + +++L
Sbjct: 91 VDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISAL 150
Query: 272 TVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNV-LTQLIVLDLSNNELT 330
+ L +L + + S N ++ LT L L +NN+++
Sbjct: 151 SGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS 210
Query: 331 EEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASL 390
+ L L L++ N++ + + L L L L NNQI ++ + L
Sbjct: 211 DI----TPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLA--PLSGL 262
Query: 391 SNLHTLIMSNNKLKRIES--------------------NSLDSLTALSVLSLDNNELEYI 430
+ L L + N++ I + + +L L+ L+L N + I
Sbjct: 263 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI 322
Query: 431 EENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAG 490
+ + T LQ NK++++ L NL ++ L G N I+++ L+ +L ++
Sbjct: 323 SP--VSSLTKLQRLFFANNKVSDVSS-LANLTNINWLSAGHNQISDLTPLA--NLTRITQ 377
Query: 491 LRLTEN 496
L L +
Sbjct: 378 LGLNDQ 383
Score = 65.0 bits (157), Expect = 2e-11
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 150 WSTMSLDISHNVFTDEL-----QSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLS 204
+ SL ++N +D +L+ L L+ N + + L +L+ L+L N++S
Sbjct: 197 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQIS 254
Query: 205 NVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHA 264
N+A S L L L N ++ + L+ L L L N L
Sbjct: 255 NLAPLSGLT--------KLTELKLGANQISNISP--LAGLTALTNLELNENQLED--ISP 302
Query: 265 LDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDL 324
+ L +LT L L NN+ +I P + L+ ++ NN ++ + + N LT + L
Sbjct: 303 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV-SSLAN-LTNINWLSA 358
Query: 325 SNNELTEEWVNAATFSGLHRLVVLNIAYN 353
+N++++ + L R+ L +
Sbjct: 359 GHNQISDL----TPLANLTRITQLGLNDQ 383
Score = 61.2 bits (147), Expect = 3e-10
Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 27/177 (15%)
Query: 146 HNTDWSTMSLDISHNVFTD-----ELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQ 200
+ L ++ N D L +L LDL+ N I L L L+ L L
Sbjct: 215 LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 272
Query: 201 NKLSNVATFSFSNYDT--------------ARCGINLRVLDLSNNSFDSLPAEGFSRLSR 246
N++SN++ + T NL L L N+ + S L++
Sbjct: 273 NQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTK 330
Query: 247 LQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNN 303
LQ L+ N ++ ++ +L L ++ L+ N + ++ P + ++ L +
Sbjct: 331 LQRLFFANNKVSDVS--SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 61.2 bits (147), Expect = 4e-10
Identities = 55/348 (15%), Positives = 114/348 (32%), Gaps = 30/348 (8%)
Query: 605 RLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTR-VDLVGNRLK 663
++T A + + G +++ + +NN ++ + P NLT+ VD++ N +
Sbjct: 45 QVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPL-----KNLTKLVDILMNNNQ 99
Query: 664 NINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLDTVTCK 723
+ T L + + + I + + S N + L L ++
Sbjct: 100 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 159
Query: 724 LLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEA 783
N+ L + + L + + + + N + +
Sbjct: 160 SFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 219
Query: 784 NVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETI- 842
N+ + S G + + LD + G KL L L ++ + I
Sbjct: 220 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNIS 279
Query: 843 -------------------HNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQ 883
+ LK L L L N +++I L L+ L+
Sbjct: 280 PLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFA 337
Query: 884 YNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLSSQIQSITLTSN 931
NK+ +S + +LT++ L HN+I+ ++I + L
Sbjct: 338 NNKVSDVS--SLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383
Score = 58.9 bits (141), Expect = 2e-09
Identities = 38/172 (22%), Positives = 61/172 (35%), Gaps = 27/172 (15%)
Query: 97 LFFQSSLSPGSFQTLIDLKDLSVEFCKIGNLSAGSFRGLRKLKTLTLR------------ 144
L G+ +L +L DL + +I NL+ GL KL L L
Sbjct: 226 LNGNQLKDIGTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNISPLAG 283
Query: 145 -THNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKL 203
T T+ + L++L L L N+I + L L L NK+
Sbjct: 284 LTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKV 341
Query: 204 SNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGN 255
S+V++ + N+ L +N L + L+R+ +L L
Sbjct: 342 SDVSSLANLT--------NINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 58.5 bits (140), Expect = 2e-09
Identities = 70/357 (19%), Positives = 136/357 (38%), Gaps = 52/357 (14%)
Query: 347 VLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRI 406
+ K N D+ DL ++ L + I+SI + L+NL + SNN+L I
Sbjct: 24 KMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI 81
Query: 407 ESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQD--------------------FHL 446
L +LT L + ++NN++ I A + + L
Sbjct: 82 T--PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 139
Query: 447 NGNKLTEIPKVLRNLHSLK---------TLDLGDNLITEINNLSLN---------SLHQL 488
+ N +++I + + L + E ++S N L L
Sbjct: 140 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNL 199
Query: 489 AGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTD 548
L T N IS+I+ + L L+L N+++ + GT + +NL + L N +++
Sbjct: 200 ESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN 255
Query: 549 IGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTY 608
+ L L L + N + L L+++ NQ+ + I + LTY
Sbjct: 256 LAP-LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE---DISPISNLKNLTY 311
Query: 609 FDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNI 665
N +++++ + ++ LF NN +S + N+ + N++ ++
Sbjct: 312 LTLYFNNISDISPVSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDL 366
Score = 43.8 bits (102), Expect = 1e-04
Identities = 59/293 (20%), Positives = 106/293 (36%), Gaps = 16/293 (5%)
Query: 360 SSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSV 419
+ IF D + + + + L + TL +K I+ ++ L L+
Sbjct: 13 NQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSID--GVEYLNNLTQ 70
Query: 420 LSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINN 479
++ NN+L I LKN T L D +N N++ +I + + + +
Sbjct: 71 INFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPL 128
Query: 480 LSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAI 539
+L L L L+ N IS+IS + +V N +
Sbjct: 129 ---KNLTNLNRLELSSNTISDISALSG------LTSLQQLSFGNQVTDLKPLANLTTLER 179
Query: 540 RLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFE 599
+ + KL NL L + N + I +L L ++GNQ+ ++G
Sbjct: 180 LDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG---T 236
Query: 600 IESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNL 652
+ S LT D ++N+++ L + + L L N IS + P
Sbjct: 237 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTN 289
Score = 39.6 bits (91), Expect = 0.002
Identities = 52/293 (17%), Positives = 103/293 (35%), Gaps = 30/293 (10%)
Query: 423 DNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLS- 481
N + + + L T+L + + I + L++L ++ +N +T+I L
Sbjct: 31 KTNVTDTVSQTDLDQVTTL---QADRLGIKSIDG-VEYLNNLTQINFSNNQLTDITPLKN 86
Query: 482 ---LNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVA 538
L + ++N++ L I ++ K +++ +
Sbjct: 87 LTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISD 146
Query: 539 IRLDGNYLTD----------IGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHG 588
I + L L L+IS N + +L+ L
Sbjct: 147 ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 206
Query: 589 NQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFM 648
NQIS++ + + L + N+L ++ A ++ +L L NN IS + P
Sbjct: 207 NQISDITPLGILTN---LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 261
Query: 649 KPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQ 701
LT + L N++ N ISPL + + + EN + + L+
Sbjct: 262 LTKLTELKLGANQISN-------ISPLAGLTALTNLELNENQLEDISPISNLK 307
Score = 36.1 bits (82), Expect = 0.023
Identities = 14/115 (12%), Positives = 32/115 (27%), Gaps = 4/115 (3%)
Query: 849 GLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDH 908
L E + L +T+ L+ + L I I L +L + +
Sbjct: 20 ALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSN 75
Query: 909 NRITSFAVWHLSSQIQSITLTSNPWSCDCDFTEKFRDYLQRSRSSVHDISQIRCM 963
N++T +++ I + +N + ++
Sbjct: 76 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 130
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 69.0 bits (167), Expect = 3e-13
Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 8/205 (3%)
Query: 268 LNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNN 327
+ S +N NL +PP+L +D ++L N + + T+L L+L
Sbjct: 9 VASHLEVNCDKRNLTALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 328 ELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTF 387
ELT+ V+ ++ + + + + L L VL + N++ S+
Sbjct: 66 ELTKLQVDGT-----LPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGAL 120
Query: 388 ASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLN 447
L L L + N+LK + L L LSL NN L + L +L L
Sbjct: 121 RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180
Query: 448 GNKLTEIPKVLRNLHSLKTLDLGDN 472
N L IPK H L L N
Sbjct: 181 ENSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 58.6 bits (140), Expect = 1e-09
Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 6/182 (3%)
Query: 222 NLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNL 281
+ +L LS N + +RL +L L LT L +L VL +
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-----GTLPVLGTLDLSH 86
Query: 282 VNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSG 341
+ L + + + + + + +L + + +
Sbjct: 87 NQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 342 LHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNN 401
+L L++A N + +L + + L L L L+ N + +I + F L + N
Sbjct: 147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF-GSHLLPFAFLHGN 205
Query: 402 KL 403
Sbjct: 206 PW 207
Score = 57.4 bits (137), Expect = 3e-09
Identities = 42/229 (18%), Positives = 70/229 (30%), Gaps = 48/229 (20%)
Query: 786 IDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSS-------- 837
++C LPP +P D T L+L N + + + +L L L+ +
Sbjct: 15 VNCDKRNLT-ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD 73
Query: 838 -------------------------------------HVETIHNKTFNGLKELIILRLDD 860
+ ++ GL EL L L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133
Query: 861 NRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLS 920
N L + L +L L N + + L +L L L N + +
Sbjct: 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFG 193
Query: 921 -SQIQSITLTSNPWSCDCDFTEKFRDYLQRSRSSVHDISQIRCMTGSEV 968
+ L NPW C+C+ FR +LQ + +V+ Q +
Sbjct: 194 SHLLPFAFLHGNPWLCNCEI-LYFRRWLQDNAENVYVWKQGVDVKAMTS 241
Score = 54.3 bits (129), Expect = 2e-08
Identities = 53/176 (30%), Positives = 69/176 (39%), Gaps = 16/176 (9%)
Query: 167 QSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNK---------------LSNVATFSF 211
+ L LS N ++T A P L+ LNL + + L
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ 90
Query: 212 SNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSL 271
S + L VLD+S N SLP L LQELYL+GN L L L L
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 272 TVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNN 327
L+L+ NNL +P L N +L + LQ NS+ + G F L L N
Sbjct: 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFG-SHLLPFAFLHGN 205
Score = 54.0 bits (128), Expect = 4e-08
Identities = 36/213 (16%), Positives = 67/213 (31%), Gaps = 9/213 (4%)
Query: 512 LTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEW 571
TIL+L+ N + T + L + LD + LP L L++S N L+
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLD-RAELTKLQVDGTLPVLGTLDLSHNQLQS 91
Query: 572 FDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENL 631
+ + L N+L L + + +
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 632 FLTN--NLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGEN 689
L+ N ++++ NL + L N L I + LP ++ N
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPF------AFLHGN 205
Query: 690 PFQCDCNMQWLQSYSVNKERNKPNLVDLDTVTC 722
P+ C+C + + + + + N V
Sbjct: 206 PWLCNCEILYFRRWLQDNAENVYVWKQGVDVKA 238
Score = 38.2 bits (87), Expect = 0.004
Identities = 43/207 (20%), Positives = 64/207 (30%), Gaps = 26/207 (12%)
Query: 755 CHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNR 814
+ + T P T + ++ + T L
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLP----- 116
Query: 815 IPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERL 874
+ G +LQ L+L + ++T+ +L L L +N LTE+ L
Sbjct: 117 -----LGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL 171
Query: 875 ENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHN------RITSFAVW---------HL 919
ENL L LQ N + I F L L N I F W
Sbjct: 172 ENLDTLLLQENSLYTIPKGFF-GSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVYVW 230
Query: 920 SSQIQSITLTSNPWSCDCDFTEKFRDY 946
+ +TSN S CD ++KF Y
Sbjct: 231 KQGVDVKAMTSNVASVQCDNSDKFPVY 257
Score = 37.8 bits (86), Expect = 0.006
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 846 TFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQ 905
+ + + + D LT + + ++ L+L N + S T + T L L
Sbjct: 5 EVSKVASHLEVNCDKRNLTALPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 906 LDHNRITSFAVWHLSSQIQSITLTSNPWSCDCDF 939
LD +T V + ++ L+ N
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLL 95
Score = 37.0 bits (84), Expect = 0.011
Identities = 30/238 (12%), Positives = 50/238 (21%), Gaps = 38/238 (15%)
Query: 599 EIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLV 658
E+ + LT L + +P L L+ NL+ T LT+++L
Sbjct: 5 EVSKVASHLEVNCDKRNLTALPPD-LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNL- 62
Query: 659 GNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLD 718
Q + L + + + S N+
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNR----------- 111
Query: 719 TVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHD 778
L E L +T
Sbjct: 112 ----------------LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 779 VSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNS 836
+ + L L L N + + F G L FL+
Sbjct: 156 ANNNLTELPAGLLNGLENL--------DTLLLQENSLYTI-PKGFFGSHLLPFAFLHG 204
Score = 35.1 bits (79), Expect = 0.041
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 175 SMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFD 234
+ N++ LP + L++L L L +N L + F ++ L L N +
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSH-------LLPFAFLHGNPWL 208
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 59.8 bits (143), Expect = 7e-10
Identities = 37/314 (11%), Positives = 88/314 (28%), Gaps = 19/314 (6%)
Query: 606 LTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNI 665
+ ++ L+ L +P +E+L + N ++++ +L + + N LK +
Sbjct: 40 AHELELNNLGLSSLP--ELPPHLESLVASCNSLTELPELP----QSLKSLLVDNNNLKAL 93
Query: 666 NQTA-----LRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLDTV 720
+ L +S K N + + +
Sbjct: 94 SDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLE 153
Query: 721 TCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVS 780
L N + + +S + L + + + + E+ T + +
Sbjct: 154 ELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADN 213
Query: 781 WEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVE 840
+ + + V + F G +L +
Sbjct: 214 NLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASS 273
Query: 841 TIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTH 900
+ L L + +N+L E+ L L +N + + +
Sbjct: 274 NEIRSLCDLPPSLEELNVSNNKLIEL----PALPPRLERLIASFNHLAEVPE----LPQN 325
Query: 901 LKVLQLDHNRITSF 914
LK L +++N + F
Sbjct: 326 LKQLHVEYNPLREF 339
Score = 59.5 bits (142), Expect = 1e-09
Identities = 53/320 (16%), Positives = 94/320 (29%), Gaps = 21/320 (6%)
Query: 155 LDISHNVFT---DELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSF 211
L++++ + + LESL S NS+ LP+ QSL L + N L ++
Sbjct: 43 LELNNLGLSSLPELPPHLESLVASCNSLTELPELP----QSLKSLLVDNNNLKALSDLPP 98
Query: 212 SNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSL 271
L L NS + + + ++ L+ L L
Sbjct: 99 LLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPEL 158
Query: 272 TVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDL------S 325
L + L + + + L L + +
Sbjct: 159 QNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT 218
Query: 326 NNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRN 385
+L + + +IF L L N + R+
Sbjct: 219 LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRS 278
Query: 386 TFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFH 445
+L L +SNNKL + + L L N L + E +L+ H
Sbjct: 279 LCDLPPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAEVPEL----PQNLKQLH 330
Query: 446 LNGNKLTEIPKVLRNLHSLK 465
+ N L E P + ++ L+
Sbjct: 331 VEYNPLREFPDIPESVEDLR 350
Score = 51.0 bits (120), Expect = 5e-07
Identities = 43/331 (12%), Positives = 100/331 (30%), Gaps = 27/331 (8%)
Query: 581 LQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTEL--------TGNAIPHSVENLF 632
L+++ +S L E L AS N LTEL + ++++ L
Sbjct: 40 AHELELNNLGLSSLP-----ELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALS 94
Query: 633 LTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQ 692
L+ + ++ + ++ +++ +L+ P +
Sbjct: 95 DLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEE 154
Query: 693 CDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCA 752
++ + N + ++ + + N L E + FL +
Sbjct: 155 LPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNN 214
Query: 753 PLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDG 812
L D + +N ++ + + L P
Sbjct: 215 LLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPN-----LYYL 269
Query: 813 NRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFE 872
N L+ L ++++ + + L L N L E+ E
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAEVP----E 321
Query: 873 RLENLRELYLQYNKIIYISNRTFLSLTHLKV 903
+NL++L+++YN + + S+ L++
Sbjct: 322 LPQNLKQLHVEYNPLREFPD-IPESVEDLRM 351
Score = 50.2 bits (118), Expect = 9e-07
Identities = 49/338 (14%), Positives = 97/338 (28%), Gaps = 27/338 (7%)
Query: 222 NLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNL 281
L+L+N SLP L+ L N LT L + SL L + NNL
Sbjct: 39 QAHELELNNLGLSSLPEL----PPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNL 90
Query: 282 VNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSG 341
+ YL ++ + + L ++D+ NN L + +
Sbjct: 91 KALSDLPPLL------EYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEF 144
Query: 342 LHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNN 401
+ ++ L + L + + ++ + +
Sbjct: 145 IAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLP 204
Query: 402 KLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNL 461
L I +++ T D T L + + L + L
Sbjct: 205 FLTTIYADNNLLKT-----LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGL 259
Query: 462 HSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNK 521
L N + + L L ++ N + + L L + N
Sbjct: 260 SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNH 315
Query: 522 IQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNL 559
+ +V + NL + ++ N L + + + +L
Sbjct: 316 LAEVP----ELPQNLKQLHVEYNPLREFPDIPESVEDL 349
Score = 49.4 bits (116), Expect = 2e-06
Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 12/160 (7%)
Query: 143 LRTHNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNK 202
L T D + + + L ++ + + + S L+
Sbjct: 206 LTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPN 265
Query: 203 LSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLAD 262
L + S +L L++SNN LPA RL+ L N L + +
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAEVPE 321
Query: 263 HALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQN 302
+L L++ N L P + ++++ + +
Sbjct: 322 L----PQNLKQLHVEYNPLREFPDIPES----VEDLRMNS 353
Score = 49.1 bits (115), Expect = 2e-06
Identities = 57/333 (17%), Positives = 101/333 (30%), Gaps = 34/333 (10%)
Query: 168 SLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLD 227
L+L+ + +LP+ L L + N L+ + +L+ L
Sbjct: 39 QAHELELNNLGLSSLPELP----PHLESLVASCNSLTELPELPQ----------SLKSLL 84
Query: 228 LSNNSFDSL----PAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVN 283
+ NN+ +L P + +S Q L + NSL L +L
Sbjct: 85 VDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEF 144
Query: 284 IPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLH 343
I + L + L L + S L
Sbjct: 145 IAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLP 204
Query: 344 RLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIES--------IHRNTFASLSNLHT 395
L + N + L + + E + N F+ LS L
Sbjct: 205 FLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPP 264
Query: 396 LIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIP 455
+ N + D +L L++ NN+L + L+ + N L E+P
Sbjct: 265 NLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAEVP 320
Query: 456 KVLRNLHSLKTLDLGDNLITEINNLSLNSLHQL 488
++ +NL K L + N + E ++ S+ L
Sbjct: 321 ELPQNL---KQLHVEYNPLREFPDI-PESVEDL 349
Score = 47.5 bits (111), Expect = 7e-06
Identities = 57/329 (17%), Positives = 111/329 (33%), Gaps = 24/329 (7%)
Query: 269 NSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNE 328
L L+ L ++P + L+ + NS+ L P + L L+V + +
Sbjct: 38 RQAHELELNNLGLSSLPELPPH----LESLVASCNSLTEL-PELPQSLKSLLVDNNNLKA 92
Query: 329 LTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLY-RLQVLHLENNQIESIHRNTF 387
L++ + + + L + + + + + N
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQL 152
Query: 388 ASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLN 447
L L L S LS+ S+ E L+N L + +
Sbjct: 153 EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYAD 212
Query: 448 GNKLTEIPKVLRNLHSLKTLDLGDNLITEI---------NNLSLNSLHQLAGLRLTENNI 498
N L +P + +L +L D + E+ + + L +L N
Sbjct: 213 NNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNAS 272
Query: 499 SNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPN 558
SN + + + L LN+++NK+ ++ A L + N+L ++ L N
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLIELPALP----PRLERLIASFNHLAEVPEL---PQN 325
Query: 559 LVWLNISENLLEWFDYALIPADLQWLDIH 587
L L++ N L F IP ++ L ++
Sbjct: 326 LKQLHVEYNPLREFPD--IPESVEDLRMN 352
Score = 43.7 bits (101), Expect = 1e-04
Identities = 52/327 (15%), Positives = 93/327 (28%), Gaps = 35/327 (10%)
Query: 188 CPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRL 247
C + L L LS++ +L L S NS LP L
Sbjct: 35 CLDRQAHELELNNLGLSSLPELPP----------HLESLVASCNSLTELPEL----PQSL 80
Query: 248 QELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINV 307
+ L + N L L L L V N + L + F + D+ L+
Sbjct: 81 KSLLVDNNNLKAL-SDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLP 139
Query: 308 LAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLY 367
+ + L A + L +L L ++ + ++ + +
Sbjct: 140 PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPE 199
Query: 368 RLQVLHLENNQIESIHRNTFASLSNLH-------------TLIMSNNKLKRIESNSLDSL 414
+ L ++ T L + + + N L
Sbjct: 200 LQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGL 259
Query: 415 TALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLI 474
+ L N + SL++ +++ NKL E+P L+ L N +
Sbjct: 260 SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPA---LPPRLERLIASFNHL 316
Query: 475 TEINNLSLNSLHQLAGLRLTENNISNI 501
E+ L L L + N +
Sbjct: 317 AEVPEL----PQNLKQLHVEYNPLREF 339
Score = 43.7 bits (101), Expect = 1e-04
Identities = 35/306 (11%), Positives = 80/306 (26%), Gaps = 27/306 (8%)
Query: 648 MKPNLTRVDLVGNRLKNI-----NQTAL-----RISPLPSH-KNIPDFYIGENPFQCDCN 696
+ ++L L ++ + +L ++ LP +++ + N + +
Sbjct: 36 LDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSD 95
Query: 697 MQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCH 756
+ L Y L +L + + + N ++ N
Sbjct: 96 LPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEEL 155
Query: 757 CCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQ----------LPPRIPMDAT 806
+ +N + ++ G + L +
Sbjct: 156 PELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNL 215
Query: 807 ELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEI 866
L + + S + F+GL EL N +
Sbjct: 216 LKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNE 275
Query: 867 RGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLSSQIQSI 926
+ +L EL + NK+I + L+ L N + L ++ +
Sbjct: 276 IRSLCDLPPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAEVP--ELPQNLKQL 329
Query: 927 TLTSNP 932
+ NP
Sbjct: 330 HVEYNP 335
Score = 39.8 bits (91), Expect = 0.002
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 520 NKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPA 579
N D +L + + N L ++ L P L L S N L +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLIASFNHLAEVPE--LPQ 324
Query: 580 DLQWLDIHGNQISELGNYFEIESQLRL 606
+L+ L + N + E + E LR+
Sbjct: 325 NLKQLHVEYNPLREFPDIPESVEDLRM 351
Score = 36.3 bits (82), Expect = 0.020
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 561 WLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELT 620
++ + E +P L+ L++ N++ EL RL AS N L E+
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPP-----RLERLIASFNHLAEVP 320
Query: 621 GNAIPHSVENLFLTNNLISKV 641
+P +++ L + N + +
Sbjct: 321 E--LPQNLKQLHVEYNPLREF 339
Score = 34.4 bits (77), Expect = 0.089
Identities = 45/367 (12%), Positives = 100/367 (27%), Gaps = 56/367 (15%)
Query: 512 LTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEW 571
L L + + + + +L ++ N LT++ L
Sbjct: 40 AHELELNNLGLSSLP----ELPPHLESLVASCNSLTELPELPQS---------------- 79
Query: 572 FDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENL 631
L+ L + N + L + L Y S+N+L +L ++ +
Sbjct: 80 ---------LKSLLVDNNNLKALSDLPP-----LLEYLGVSNNQLEKLPELQNSSFLKII 125
Query: 632 FLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPF 691
+ NN + K+ ++ + + + N L ++ + +
Sbjct: 126 DVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLE 185
Query: 692 QCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNC 751
L+ + L LLK E
Sbjct: 186 SIVAGNNILEELPELQ-------------NLPFLTTIYADNNLLKTLPDLPPSLEALNVR 232
Query: 752 APLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLD 811
+ N+ + + + +P EL +
Sbjct: 233 DNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVS 292
Query: 812 GNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEF 871
N++ + + +L+ L + +H+ + + L L ++ N L E
Sbjct: 293 NNKLIELPALP----PRLERLIASFNHLAEVPEL----PQNLKQLHVEYNPLREF-PDIP 343
Query: 872 ERLENLR 878
E +E+LR
Sbjct: 344 ESVEDLR 350
Score = 33.6 bits (75), Expect = 0.14
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 426 ELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSL 485
+ + + + + L LN L+ +P++ + L++L N +TE+ L
Sbjct: 28 AVSRLRDCLDRQAHEL---ELNNLGLSSLPELPPH---LESLVASCNSLTELPEL----P 77
Query: 486 HQLAGLRLTENNISNI 501
L L + NN+ +
Sbjct: 78 QSLKSLLVDNNNLKAL 93
Score = 33.3 bits (74), Expect = 0.21
Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 8/102 (7%)
Query: 361 SIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVL 420
+ + + R + ++ R H L ++N L + + L L
Sbjct: 8 NAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLP----ELPPHLESL 63
Query: 421 SLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLH 462
N L + E SL+ ++ N L + + L
Sbjct: 64 VASCNSLTELPE----LPQSLKSLLVDNNNLKALSDLPPLLE 101
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 54.0 bits (129), Expect = 4e-09
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 224 RVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVN 283
RVL L++ L +L + L L N L L AL L L VL S N L N
Sbjct: 1 RVLHLAHKDLTVLC--HLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 284 IPPELFNQSRDLKEVYLQNNSINVL-APGIFNVLTQLIVLDLSNNELTEE 332
+ L+E+ L NN + A +L++L+L N L +E
Sbjct: 58 VDG--VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
Score = 50.1 bits (119), Expect = 6e-08
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Query: 370 QVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEY 429
+VLHL + + + L + L +S+N+L+ + +L +L L VL +N LE
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 430 IEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLA 489
++ A N + + + L + L L+L N + + + L
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 490 GLR 492
+
Sbjct: 118 SVS 120
Score = 48.9 bits (116), Expect = 2e-07
Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 8/127 (6%)
Query: 296 KEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKM 355
+ ++L + + VL L + LDLS+N L + L L VL + N +
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALP---PALAALRCLEVLQASDNAL 55
Query: 356 NKLDSSIFKDLYRLQVLHLENNQIESIHR-NTFASLSNLHTLIMSNNKLKRIESNSLDSL 414
+D + L L NN+++ S L L + N L + E
Sbjct: 56 ENVDGVANLPRLQ--ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLA 113
Query: 415 TALSVLS 421
L +S
Sbjct: 114 EMLPSVS 120
Score = 48.9 bits (116), Expect = 2e-07
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Query: 514 ILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFD 573
+L+LA + + + + + L N L + L L L S+N LE D
Sbjct: 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 574 YALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTG 621
LQ L + N++ + + S RL + N L + G
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 47.0 bits (111), Expect = 1e-06
Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 15/114 (13%)
Query: 155 LDISHNVFTD-----ELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATF 209
L ++H T +L + LDLS N + LP A+ L ++ +
Sbjct: 3 LHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALA---------ALRCLEVLQASDN 53
Query: 210 SFSNYDTARCGINLRVLDLSNNSFDSLPA-EGFSRLSRLQELYLQGNILTFLAD 262
+ N D L+ L L NN A + RL L LQGN L
Sbjct: 54 ALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 42.4 bits (99), Expect = 3e-05
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Query: 419 VLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEIN 478
VL L + +L + L+ + L+ N+L +P L L L+ L DN + ++
Sbjct: 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 479 NLSLNSLHQLAGLRLTENNISNISK-GVFEKLSVLTILNLASNKIQKVE 526
++ Q L L N + + L +LNL N + + E
Sbjct: 60 GVANLPRLQE--LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 40.1 bits (93), Expect = 3e-04
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 172 LDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNN 231
L L+ + L L +++L+L+ N+L + L VL S+N
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLR-------ALPPALAALRCLEVLQASDN 53
Query: 232 SFDSLPAEGFSRLSRLQELYLQGNILTFLAD-HALDGLNSLTVLNLSVNNLVNIP 285
+ +++ G + L RLQEL L N L A L L +LNL N+L
Sbjct: 54 ALENVD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 36.6 bits (84), Expect = 0.003
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 562 LNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTG 621
L+++ L + + LD+ N++ + + L AS N L + G
Sbjct: 3 LHLAHKDLTVLCHLEQLLLVTHLDLSHNRLR--ALPPALAALRCLEVLQASDNALENVDG 60
Query: 622 NAIPHSVENLFLTNNLISKVQPYTFFMK-PNLTRVDLVGNRLKNI 665
A ++ L L NN + + + P L ++L GN L
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
Score = 32.0 bits (72), Expect = 0.13
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
Query: 808 LYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIR 867
L+L + V+ + L L+ + + L+ L +L+ DN L +
Sbjct: 3 LHLAHKDLTVL--CHLEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQASDNALENVD 59
Query: 868 GYEFERLENLRELYLQYNKIIYISN-RTFLSLTHLKVLQLDHNRITS 913
G L+EL L N++ + + +S L +L L N +
Sbjct: 60 GVANLP--RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
Score = 29.7 bits (66), Expect = 0.83
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 806 TELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTE 865
T L L NR+ + + + L++L + + +E + + L L +NRL +
Sbjct: 23 THLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVDGVANLPRLQ--ELLLCNNRLQQ 79
Query: 866 IRGYE-FERLENLRELYLQYNKIIYISN---RTFLSLTHLKVL 904
+ L L LQ N + R L + +
Sbjct: 80 SAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
Score = 28.5 bits (63), Expect = 2.3
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 4/90 (4%)
Query: 878 RELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSF--AVWHLSSQIQSITLTSNPWSC 935
R L+L + + + + L + L L HNR+ + A+ L + +
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 936 DCDFTEKFRDYLQRSRSSVHDISQIRCMTG 965
D L + + + I+ +
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVS 88
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 55.3 bits (131), Expect = 1e-08
Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 7/239 (2%)
Query: 219 CGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSV 278
C + RV + +P++ EL L + A G L + +S
Sbjct: 6 CHCSNRVFLCQESKVTEIPSDLPRNA---IELRFVLTKLRVIQKGAFSGFGDLEKIEISQ 62
Query: 279 NNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDL--SNNELTEEWVNA 336
N+++ + + + N+L + L SN +
Sbjct: 63 NDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVH 122
Query: 337 ATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTL 396
S L+ + N +S + +L L N I+ IH F
Sbjct: 123 KIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELN 182
Query: 397 IMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIP 455
+ NN L+ + ++ + +L + + + L+N L+ + L ++P
Sbjct: 183 LSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLR--ARSTYNLKKLP 239
Score = 49.5 bits (116), Expect = 8e-07
Identities = 27/239 (11%), Positives = 68/239 (28%), Gaps = 29/239 (12%)
Query: 650 PNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKER 709
N + V +L+ I + A I + E + ++
Sbjct: 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88
Query: 710 NKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTC 769
++ ++ P +
Sbjct: 89 -----------------------------NNLLYINPEAFQNLPNLQYLLISNTGIKHLP 119
Query: 770 PNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKL 829
+ + + + + ++ L+L+ N I + + +F G +
Sbjct: 120 DVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLD 179
Query: 830 QILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKII 888
++ +++++E + N F+G +IL + R+ + Y E L+ LR K +
Sbjct: 180 ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKL 238
Score = 48.4 bits (113), Expect = 2e-06
Identities = 28/230 (12%), Positives = 64/230 (27%), Gaps = 6/230 (2%)
Query: 607 TYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNIN 666
F +K+TE+ + +P + L + +Q F +L ++++ N + +
Sbjct: 11 RVFLCQESKVTEIPSD-LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 667 QTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLY 726
+ + S+ E N + + + +
Sbjct: 70 EA-----DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 124
Query: 727 NRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVI 786
+ +L + + N E + + +NC E N+
Sbjct: 125 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLS 184
Query: 787 DCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNS 836
D + L + RI + S+ KKL+ +
Sbjct: 185 DNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234
Score = 47.6 bits (111), Expect = 3e-06
Identities = 34/241 (14%), Positives = 78/241 (32%), Gaps = 9/241 (3%)
Query: 168 SLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLD 227
S + + +P + ++ L KL + +FS + +
Sbjct: 9 SNRVFLCQESKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIE----IS 61
Query: 228 LSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPE 287
++ + + + N L ++ A L +L L +S + ++P
Sbjct: 62 QNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV 121
Query: 288 LFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVV 347
S + +Q+N V + L N+ + ++ F+G +
Sbjct: 122 HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDEL 181
Query: 348 LNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIE 407
N + +L + +F +L + +I S+ +L L S LK++
Sbjct: 182 NLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR--STYNLKKLP 239
Query: 408 S 408
+
Sbjct: 240 T 240
Score = 46.4 bits (108), Expect = 9e-06
Identities = 41/235 (17%), Positives = 84/235 (35%), Gaps = 8/235 (3%)
Query: 270 SLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNEL 329
S V + + IP +L R+ E+ + V+ G F+ L +++S N++
Sbjct: 9 SNRVFLCQESKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 330 TEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFAS 389
E + + N + ++ F++L LQ L + N I+ +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 390 LSNLHTLIMSN--NKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLN 447
L + + N ++ + +L L+ N ++ I A + + +
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 448 GNKLTEIP-KVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNI 501
N L E+P V LD+ I + + L +L +L N+ +
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKL 238
Score = 44.1 bits (102), Expect = 4e-05
Identities = 25/177 (14%), Positives = 56/177 (31%)
Query: 734 LLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGY 793
+ + + +N L A + P ++ +
Sbjct: 60 ISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLP 119
Query: 794 DNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKEL 853
D + ++ + N + + + IL+LN + ++ IHN FNG +
Sbjct: 120 DVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLD 179
Query: 854 IILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNR 910
+ D+N L E+ F L + +I + + +L L+ + +
Sbjct: 180 ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 39.5 bits (90), Expect = 0.002
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 146 HNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNK 202
N + ++ ++VF LD+S I +LP L+ L + K
Sbjct: 181 LNLSDNNNLEELPNDVFHG-ASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 32.6 bits (72), Expect = 0.22
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 769 CPN-NCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGRK 827
C + C C V C ++P +P +A EL ++ V+ +F G
Sbjct: 1 CHHRICHC------SNRVFLCQESKVT-EIPSDLPRNAIELRFVLTKLRVIQKGAFSGFG 53
Query: 828 KLQILFLNSSH 838
L+ + ++ +
Sbjct: 54 DLEKIEISQND 64
Score = 32.6 bits (72), Expect = 0.23
Identities = 38/266 (14%), Positives = 71/266 (26%), Gaps = 33/266 (12%)
Query: 294 DLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYN 353
+ Q + + + + I L +L + FSG L + I+ N
Sbjct: 9 SNRVFLCQESKVTEIPSDLP---RNAIELRFVLTKLRV--IQKGAFSGFGDLEKIEISQN 63
Query: 354 KMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDS 413
+ ++ + ++ N A + + + +
Sbjct: 64 DVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLP---- 119
Query: 414 LTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNL 473
+ + L E + L L N
Sbjct: 120 ---------------DVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 164
Query: 474 ITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNN 533
I EI+N + N NN+ + VF S IL+++ +I + + +N
Sbjct: 165 IQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL 224
Query: 534 SNLVAIRLDGNYLTDIGGLFPKLPNL 559
L A L KLP L
Sbjct: 225 KKLRA--RSTYNLK-------KLPTL 241
Score = 30.6 bits (67), Expect = 1.1
Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 4/187 (2%)
Query: 735 LKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYD 794
L+ F + + + + ++ + N++ + +
Sbjct: 41 LRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 100
Query: 795 NQLPPRIPMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELI 854
N + + + + +K L + N + N E +
Sbjct: 101 NLPNLQYLLISNTGIKHLPDV----HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESV 156
Query: 855 ILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSF 914
IL L+ N + EI F + N + + N F + +L + RI S
Sbjct: 157 ILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 216
Query: 915 AVWHLSS 921
+ L +
Sbjct: 217 PSYGLEN 223
Score = 29.5 bits (64), Expect = 2.1
Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Query: 855 ILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSF 914
+ ++++TEI + N EL K+ I F L+ +++ N +
Sbjct: 12 VFLCQESKVTEIPS---DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 68
Query: 915 AVWHLSSQIQSITLTSNPWSCDCDFTEKFRDY 946
+ S + + + + +
Sbjct: 69 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 100
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 53.8 bits (127), Expect = 8e-08
Identities = 48/464 (10%), Positives = 109/464 (23%), Gaps = 41/464 (8%)
Query: 463 SLKTLDLGDNLITEINNLSL-NSLHQLAGLRLTENNISNISKG----VFEKLSVLTILNL 517
+++LD+ +++ L L Q +RL + ++ L LNL
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 518 ASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALI 577
SN++ V + GL + L++ L ++
Sbjct: 63 RSNELGDVGVHCV------------------LQGLQTPSCKIQKLSLQNCCLTGAGCGVL 104
Query: 578 PADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNL 637
+ L+ L + QL +L +L S + ++
Sbjct: 105 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 164
Query: 638 ISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNM 697
+ + N + L + + ++ D
Sbjct: 165 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS----DNCRDLCG 220
Query: 698 QWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHC 757
S+ + N + + + L +
Sbjct: 221 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR 280
Query: 758 CDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPV 817
+ + + E + +
Sbjct: 281 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQ-- 338
Query: 818 VGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIR----GYEFER 873
+ F+ ++ L + V + L +L L D +++
Sbjct: 339 ---NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLA 395
Query: 874 LENLRELYLQYNKI-----IYISNRTFLSLTHLKVLQLDHNRIT 912
+LREL L N + + + L+ L L +
Sbjct: 396 NHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439
Score = 43.8 bits (101), Expect = 1e-04
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 221 INLRVLDLSNNSF-DSLPAEGFSRLSRLQELYLQGNILT-----FLADHALDGLNSLTVL 274
++++ LD+ D+ AE L + Q + L LT ++ AL +L L
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISS-ALRVNPALAEL 60
Query: 275 NLSVNNL-----VNIPPELFNQSRDLKEVYLQNN 303
NL N L + L S ++++ LQN
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 43.0 bits (99), Expect = 2e-04
Identities = 53/510 (10%), Positives = 119/510 (23%), Gaps = 62/510 (12%)
Query: 392 NLHTLIMSNNKLKRIESNSL-DSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNK 450
++ +L + +L L L V+ LD+ L +
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC-------------------GLTEAR 43
Query: 451 LTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLS 510
+I LR +L L+L N L + + + +G+
Sbjct: 44 CKDISSALRVNPALAELNLRSN-------------------ELGDVGVHCVLQGLQTPSC 84
Query: 511 VLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLE 570
+ L+L + + G + + + + ++ L+ + +
Sbjct: 85 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL--GDAGLQLLCEGLLDPQCR 142
Query: 571 WFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVEN 630
L L E + + + ++ P +E
Sbjct: 143 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEA 202
Query: 631 LFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENP 690
L L + ++ N P +
Sbjct: 203 LKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 262
Query: 691 FQCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETN 750
++C + + L E ++
Sbjct: 263 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 322
Query: 751 CAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYL 810
C F + + ++ +A V + G L+L
Sbjct: 323 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPG------SVLRVLWL 376
Query: 811 DGNRIPVVG----SHSFIGRKKLQILFLNSSH-----VETIHNKTFNGLKELIILRLDDN 861
+ + + + L+ L L+++ + + L L L D
Sbjct: 377 ADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDI 436
Query: 862 RLTEIRGYEFERLENLRELYLQYNKIIYIS 891
+E E + L+ L + IS
Sbjct: 437 YWSE------EMEDRLQALEKDKPSLRVIS 460
Score = 39.6 bits (90), Expect = 0.002
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
Query: 310 PGIFNVLTQLIVLDLSNNELTEEWVN--AATFSGLHRLVVLNIAYNKMN-----KLDSSI 362
G+ + L VL L++ ++++ + AAT H L L+++ N + +L S+
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 363 FKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRI 406
+ L+ L L + + L L L+ I
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDR------LQALEKDKPSLRVI 459
Score = 39.2 bits (89), Expect = 0.003
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 168 SLESLDLSMNSIWTLPDAIFCP-LQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVL 226
++SLD+ + A P LQ + L L+ S+ R L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA--LRVNPALAEL 60
Query: 227 DLSNNSFDSLPAEGFSRL-----SRLQELYLQGN 255
+L +N + + ++Q+L LQ
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 38.8 bits (88), Expect = 0.004
Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 292 SRDLKEVYLQNNSIN-VLAPGIFNVLTQLIVLDLSNNELTEEWVN--AATFSGLHRLVVL 348
S D++ + +Q ++ + +L Q V+ L + LTE ++ L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 349 NIAYNK-----MNKLDSSIFKDLYRLQVLHLENNQIESIH 383
N+ N+ ++ + + ++Q L L+N +
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 100
Score = 37.3 bits (84), Expect = 0.011
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 269 NSLTVLNLSVNNLVNIP----PELFNQSRDLKEVYLQNNSIN-----VLAPGIFNVLTQL 319
+ L VL L+ ++ + + L+E+ L NN + L + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 320 IVLDLSNNELTEE 332
L L + +EE
Sbjct: 429 EQLVLYDIYWSEE 441
Score = 37.3 bits (84), Expect = 0.012
Identities = 24/104 (23%), Positives = 35/104 (33%), Gaps = 11/104 (10%)
Query: 180 WTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAE 239
L + P L L L +S+ + S + T +LR LDLSNN
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA--TLLANHSLRELDLSNNCLGDAGIL 415
Query: 240 GFSR-----LSRLQELYLQGNILTFLADHALDGL----NSLTVL 274
L++L L + + L L SL V+
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 36.5 bits (82), Expect = 0.022
Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Query: 852 ELIILRLDDNRLTEIRGYE-FERLENLRELYLQYNKIIYISNRT----FLSLTHLKVLQL 906
++ L + L++ R E L+ + + L + + L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 907 DHNRITSFAVWHLSSQIQSITLT 929
N + V + +Q+ +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCK 85
Score = 36.1 bits (81), Expect = 0.025
Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 10/119 (8%)
Query: 145 THNTDWSTMSLDISHNVFTDELQSLESLDLSMNSI-----WTLPDAIFCPLQSLSYLNLT 199
N + L L L+ + +L + SL L+L+
Sbjct: 347 ISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLA-NHSLRELDLS 405
Query: 200 QNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILT 258
N L + + G L L L + + E RL L++ +++
Sbjct: 406 NNCLGDAGILQLVES-VRQPGCLLEQLVLYDIYWS---EEMEDRLQALEKDKPSLRVIS 460
Score = 35.3 bits (79), Expect = 0.050
Identities = 31/403 (7%), Positives = 92/403 (22%), Gaps = 14/403 (3%)
Query: 533 NSNLVAIRLDGNYLTDIG--GLFPKLPNLVWLNISENLLEWFDYALIPA------DLQWL 584
+ ++ ++ + L+D L P L + + + L I + L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 585 DIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPY 644
++ N++ ++G L S K+ +L+ + + ++ + +
Sbjct: 61 NLRSNELGDVG------VHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTL 114
Query: 645 TFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYS 704
+ D L + P +
Sbjct: 115 QELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKEL 174
Query: 705 VNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACD 764
+ A+ L+ C A
Sbjct: 175 TVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 234
Query: 765 CEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFI 824
+ + ++ + + D + + +
Sbjct: 235 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 294
Query: 825 GRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQY 884
+ L + ++ + + + F + L+
Sbjct: 295 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 354
Query: 885 NKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLSSQIQSIT 927
+ + + L+VL L ++ + L++ + +
Sbjct: 355 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH 397
Score = 35.0 bits (78), Expect = 0.060
Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 345 LVVLNIAYNKMNKLD-SSIFKDLYRLQVLHLENNQIESIHRNTFAS----LSNLHTLIMS 399
+ L+I +++ + + L + QV+ L++ + +S L L +
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 400 NNKLKRIESNSLDSLTALSVLSL 422
+N+L + + + +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKI 86
Score = 34.2 bits (76), Expect = 0.12
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 355 MNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFAS----LSNLHTLIMSNNKL-----KR 405
+ +L + + L+VL L + + ++ A+ +L L +SNN L +
Sbjct: 357 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ 416
Query: 406 IESNSLDSLTALSVLSLDNNELEYIEENALK 436
+ + L L L + E+ L+
Sbjct: 417 LVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 447
Score = 33.8 bits (75), Expect = 0.16
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 4/121 (3%)
Query: 847 FNGLKELIILRLDDNRLTEIR----GYEFERLENLRELYLQYNKIIYISNRTFLSLTHLK 902
L++ ++RLDD LTE R L EL L+ N++ + L
Sbjct: 23 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82
Query: 903 VLQLDHNRITSFAVWHLSSQIQSITLTSNPWSCDCDFTEKFRDYLQRSRSSVHDISQIRC 962
++ + + + + S TL + P + ++ +
Sbjct: 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCR 142
Query: 963 M 963
+
Sbjct: 143 L 143
Score = 31.5 bits (69), Expect = 0.63
Identities = 14/96 (14%), Positives = 35/96 (36%), Gaps = 15/96 (15%)
Query: 112 IDLKDLSVEFCKIGNLS-AGSFRGLRKLKTLTLRTHN---TDWSTMSLDISHNVFTDELQ 167
+D++ L ++ ++ + A L++ + + L +S + N
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVN------P 55
Query: 168 SLESLDLSMNSI-----WTLPDAIFCPLQSLSYLNL 198
+L L+L N + + + P + L+L
Sbjct: 56 ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSL 91
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 50.2 bits (118), Expect = 3e-07
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 9/169 (5%)
Query: 769 CPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHSFIGR-K 827
CP C C E +DC+ G ++P IP+ TEL L+ N + + S GR
Sbjct: 2 CPAMCHC------EGTTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLP 54
Query: 828 KLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKI 887
L L L + + I F G + L+L +N++ EI F L L+ L L N+I
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 888 IYISNRTFLSLTHLKVLQL-DHNRITSFAVWHLSSQIQSITLTSNPWSC 935
+ +F L L L L + + + + ++ +L C
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARC 163
Score = 44.0 bits (102), Expect = 3e-05
Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 10/195 (5%)
Query: 217 ARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGN-ILTFLADHALDGLNSLTVLN 275
A C +D + +P + EL L N + +D L L L
Sbjct: 4 AMCHCEGTTVDCTGRGLKEIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLE 60
Query: 276 LSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVN 335
L N L I P F + ++E+ L N I ++ +F L QL L+L +N+++ V
Sbjct: 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISC--VM 118
Query: 336 AATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHT 395
+F L+ L + + + L+ L + + ++
Sbjct: 119 PGSFEHLNSLTS-LNLASNPFNCNCHLAWFAEWLRKKSLNGGAARC---GAPSKVRDVQI 174
Query: 396 LIMSNNKLKRIESNS 410
+ +++ K NS
Sbjct: 175 KDLPHSEFKCSSENS 189
Score = 41.7 bits (96), Expect = 2e-04
Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 270 SLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINV-LAPGIFNVLTQLIVLDLSNNE 328
T ++ + L IP ++ E+ L +N + + G+F L L+ L+L N+
Sbjct: 9 EGTTVDCTGRGLKEIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ 65
Query: 329 LTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFA 388
LT NA + + + + NK+ ++ + +F L++L+ L+L +NQI + +F
Sbjct: 66 LTGIEPNAFEGASHIQEL--QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 123
Query: 389 SLSNLHTLIM---------------SNNKLKRIESNSL-----DSLTALSVLSLDNNELE 428
L++L +L + + K + + + + + L ++E +
Sbjct: 124 HLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFK 183
Query: 429 YIEENA 434
EN+
Sbjct: 184 CSSENS 189
Score = 37.5 bits (85), Expect = 0.004
Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 2/173 (1%)
Query: 418 SVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEI 477
+ + L+ I + ++T L + N + L L L+L N +T I
Sbjct: 11 TTVDCTGRGLKEIPRDIPLHTTEL-LLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI 69
Query: 478 NNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLV 537
+ + L+L EN I IS +F L L LNL N+I V G+F++ ++L
Sbjct: 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129
Query: 538 AIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQ 590
++ L N L L +++ + + D+Q D+ ++
Sbjct: 130 SLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKV-RDVQIKDLPHSE 181
Score = 37.1 bits (84), Expect = 0.006
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 14/189 (7%)
Query: 168 SLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLD 227
++D + + +P I L L++ S+ +L L+
Sbjct: 9 EGTTVDCTGRGLKEIPRDIPLHTTELL--------LNDNELGRISSDGLFGRLPHLVKLE 60
Query: 228 LSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPE 287
L N + F S +QEL L N + +++ GL+ L LNL N + + P
Sbjct: 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120
Query: 288 LFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVV 347
F L + L +N N + L L+ S + + +
Sbjct: 121 SFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAAR-----CGAPSKVRDVQI 174
Query: 348 LNIAYNKMN 356
++ +++
Sbjct: 175 KDLPHSEFK 183
Score = 34.8 bits (78), Expect = 0.035
Identities = 27/172 (15%), Positives = 61/172 (35%), Gaps = 15/172 (8%)
Query: 577 IPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFL--T 634
IP L ++ N++ + + L + N+LT + NA + L
Sbjct: 27 IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86
Query: 635 NNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCD 694
N I ++ F L ++L N++ + + ++ + NPF C+
Sbjct: 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE-----HLNSLTSLNLASNPFNCN 141
Query: 695 CNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCE 746
C++ W + + ++ C + + +K+ ++F C
Sbjct: 142 CHLAWFAEW------LRKKSLNGGAARCGAPSKVRD--VQIKDLPHSEFKCS 185
Score = 31.3 bits (69), Expect = 0.45
Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 11/140 (7%)
Query: 64 CKLRTINSEIENTNFSIIQAQYTVRLRIECGDMLFFQSSLSPGSFQTLIDLKDLSVEFCK 123
L + + A E +S F L LK L++ +
Sbjct: 54 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 113
Query: 124 IGNLSAGSFRGLRKLKTLTLRTHNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWTLP 183
I + GSF L L +L L ++ + + + + L+ +
Sbjct: 114 ISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRK--------KSLNGGAARC-- 163
Query: 184 DAIFCPLQSLSYLNLTQNKL 203
++ + +L ++
Sbjct: 164 -GAPSKVRDVQIKDLPHSEF 182
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 49.4 bits (117), Expect = 3e-07
Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 13/152 (8%)
Query: 422 LDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLS 481
L ++E ++ + L+ L P L + L+ ++ + +
Sbjct: 4 LKPEQVEQLKL-IMSKRYDGSQQALDLKGLRSDP-DLVAQNIDVVLNRRSSMAATLRIIE 61
Query: 482 LNSLHQLAGLRLTENNISNIS--KGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAI 539
N + +L L L+ N + + + +K L ILNL+ N+++ L +
Sbjct: 62 EN-IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEEL 120
Query: 540 RLDGNYLTDIGG--------LFPKLPNLVWLN 563
LDGN L+D + + P L+ L+
Sbjct: 121 WLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
Score = 48.7 bits (115), Expect = 5e-07
Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 14/154 (9%)
Query: 373 HLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEE 432
L+ Q+E + + + + + L+ L + VL+ ++ +
Sbjct: 3 ELKPEQVEQL-KLIMSKRYDGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAATLR- 58
Query: 433 NALKNSTSLQDFHLNGNKLT---EIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLA 489
+N L +L+ N+L ++ +++ +LK L+L N + L +L
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 490 GLRLTENNISNISKG-------VFEKLSVLTILN 516
L L N++S+ + + E+ L L+
Sbjct: 119 ELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
Score = 47.9 bits (113), Expect = 8e-07
Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 264 ALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLD 323
+ + L + L P+L Q+ + +++ L I + +L+ L+
Sbjct: 15 IMSKRYDGSQQALDLKGL-RSDPDLVAQNI-DVVLNRRSSMAATL-RIIEENIPELLSLN 71
Query: 324 LSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIH 383
LSNN L ++ L +LN++ N++ +L+ L L+ N +
Sbjct: 72 LSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTF 131
Query: 384 RNTFASLSNLHTLIMSNNKLKRIESNSL 411
R+ + + + KL R++ + L
Sbjct: 132 RDQS---TYISAIRERFPKLLRLDGHEL 156
Score = 45.2 bits (106), Expect = 7e-06
Identities = 32/153 (20%), Positives = 48/153 (31%), Gaps = 25/153 (16%)
Query: 318 QLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENN 377
LDL + + VVLN + M I +++ L L+L NN
Sbjct: 23 SQQALDLKGLRSDPD------LVAQNIDVVLNRR-SSMAATLRIIEENIPELLSLNLSNN 75
Query: 378 QIESIH--RNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENAL 435
++ + + NL L +S N+LK L L LD N L
Sbjct: 76 RLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS------- 128
Query: 436 KNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLD 468
++ T I + L LD
Sbjct: 129 ---------DTFRDQSTYISAIRERFPKLLRLD 152
Score = 42.1 bits (98), Expect = 9e-05
Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 10/111 (9%)
Query: 222 NLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLAD--HALDGLNSLTVLNLSVN 279
VL+ ++ +L + L L L N L L D + +L +LNLS N
Sbjct: 43 IDVVLNRRSSMAATLRII-EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN 101
Query: 280 NLVNIPPELFNQSRDLKEVYLQNNSINVLAPG-------IFNVLTQLIVLD 323
L + + L+E++L NS++ I +L+ LD
Sbjct: 102 ELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
Score = 39.8 bits (92), Expect = 6e-04
Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 7/126 (5%)
Query: 826 RKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYN 885
R L+ + + + ++L + +R E + L L L N
Sbjct: 19 RYDGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAATLRII-EENIPELLSLNLSNN 75
Query: 886 KIIYISN--RTFLSLTHLKVLQLDHNRITSFA--VWHLSSQIQSITLTSNPWSCDCDFTE 941
++ + + +LK+L L N + S +++ + L N S
Sbjct: 76 RLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQS 135
Query: 942 KFRDYL 947
+ +
Sbjct: 136 TYISAI 141
Score = 37.9 bits (87), Expect = 0.003
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 804 DATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRL 863
D ++ LD + S + + + ++ S + + EL+ L L +NRL
Sbjct: 21 DGSQQALDLKGLR---SDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRL 77
Query: 864 TEIRG--YEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITS 913
+ ++ NL+ L L N++ + L+ L LD N ++
Sbjct: 78 YRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129
Score = 33.6 bits (76), Expect = 0.064
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 7/125 (5%)
Query: 104 SPGSFQTLIDLKDLSVEFCKIGNLSAGSFRGLRKLKTLTLRTHNTDWSTMSLDISHNVFT 163
S L+ L + +L +L L + + +
Sbjct: 34 SDPDLVAQNIDVVLNRRSSMAATLR-IIEENIPELLSLNLS-----NNRLYRLDDMSSIV 87
Query: 164 DELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGI-N 222
+ +L+ L+LS N + + + L L L N LS+ + R
Sbjct: 88 QKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPK 147
Query: 223 LRVLD 227
L LD
Sbjct: 148 LLRLD 152
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 51.3 bits (121), Expect = 3e-07
Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 10/257 (3%)
Query: 221 INLRVLDLSNNSFD---SLPAEGFSRLSRLQELYLQGNI-LTFLADHALDGLNSLTVLNL 276
+ LDLS + +P+ + L L LY+ G L A+ L L L +
Sbjct: 50 YRVNNLDLSGLNLPKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYI 108
Query: 277 SVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNA 336
+ N+ P+ +Q + L + N+++ P + L L+ + N ++ +
Sbjct: 109 THTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD- 167
Query: 337 ATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVL-HLENNQIESIHRNTFASLSNLHT 395
S + N+L I L + + + +
Sbjct: 168 ---SYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 396 LIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIP 455
I + + L+ L L NN + L L +++ N L
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 456 KVLRNLHSLKTLDLGDN 472
NL +N
Sbjct: 285 PQGGNLQRFDVSAYANN 301
Score = 40.1 bits (92), Expect = 0.001
Identities = 48/264 (18%), Positives = 86/264 (32%), Gaps = 13/264 (4%)
Query: 437 NSTSLQDFHLNGNKLT---EIPKVLRNLHSLKTLDLGDNL-ITEINNLSLNSLHQLAGLR 492
+ + + L+G L IP L NL L L +G + ++ L QL L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 493 LTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTD-IGG 551
+T N+S ++ L L+ + N + + + NLV I DGN ++ I
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 552 LFPKLPNLV--WLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYF 609
+ L L +L ++D+ N + + +
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227
Query: 610 DASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTA 669
A ++ +L + ++ L L NN I P L +++ N L
Sbjct: 228 LAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG----- 282
Query: 670 LRISPLPSHKNIPDFYIGENPFQC 693
I + + N C
Sbjct: 283 -EIPQGGNLQRFDVSAYANNKCLC 305
Score = 39.3 bits (90), Expect = 0.002
Identities = 46/259 (17%), Positives = 86/259 (33%), Gaps = 32/259 (12%)
Query: 267 GLNSLTVLNLSVNNLVN---IPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLD 323
+ L+LS NL IP L N N++ P LTQL L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 324 LSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIE-SI 382
+++ ++ + + LV L+ +YN ++ L L + + N+I +I
Sbjct: 108 ITHTNVSGAIPDFLSQI--KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 383 HRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNEL--------------- 427
+ + ++ +S N+L + +L V N
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQK 225
Query: 428 -------EYIEENALKNSTSLQDFHLNGNKLT-EIPKVLRNLHSLKTLDLGDNLIT-EIN 478
+ + S +L L N++ +P+ L L L +L++ N + EI
Sbjct: 226 IHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Query: 479 NLSLNSLHQLAGLRLTENN 497
+L + N
Sbjct: 286 --QGGNLQRFDVSAYANNK 302
Score = 33.6 bits (75), Expect = 0.14
Identities = 28/268 (10%), Positives = 57/268 (21%), Gaps = 24/268 (8%)
Query: 651 NLTRVDLVGNRLKNI--------NQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQS 702
+ +DL G L N L + N+ + ++
Sbjct: 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH 110
Query: 703 YSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDA 762
+V+ VT YN + +
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSG-------TLPPSISSLPNLVGITFDGNRISG 163
Query: 763 CDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVGSHS 822
+ + + + N + +
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF--------VDLSRNMLEGDASV 215
Query: 823 FIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYL 882
G K + + K L L L +NR+ +L+ L L +
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 883 QYNKIIYISNRTFLSLTHLKVLQLDHNR 910
+N + +L V +N+
Sbjct: 276 SFNNLCG-EIPQGGNLQRFDVSAYANNK 302
Score = 32.8 bits (73), Expect = 0.21
Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 25/256 (9%)
Query: 169 LESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDL 228
+ +LDLS ++ P I L +L YL + + L L +
Sbjct: 52 VNNLDLSGLNL-PKPYPIPSSLANLPYL--NFLYIGGINNLVGPIPPAIAKLTQLHYLYI 108
Query: 229 SNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPEL 288
++ + + S++ L L N L+ ++ L +L + N + P+
Sbjct: 109 THTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
Query: 289 FNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVL 348
+ L + + L +DLS N L + + + L
Sbjct: 169 YGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228
Query: 349 NIAYNKM------------------NKLDSSI---FKDLYRLQVLHLENNQIESIHRNTF 387
N++ ++ L L L++ N +
Sbjct: 229 AKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL-CGEIPQG 287
Query: 388 ASLSNLHTLIMSNNKL 403
+L +NNK
Sbjct: 288 GNLQRFDVSAYANNKC 303
Score = 32.4 bits (72), Expect = 0.30
Identities = 44/256 (17%), Positives = 82/256 (32%), Gaps = 26/256 (10%)
Query: 314 NVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYN-KMNKLDSSIFKDLYRLQVL 372
++ LDLS L + + ++ + L L L I + L +L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 373 HLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEE 432
++ + + + + + L TL S N L S+ SL L ++ D N +
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 433 NALKNSTSLQ-DFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGL 491
++ + + L ++ N+LT +L +DL N++ ++ S +
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 492 R-----------------------LTENNISNISKGVFEKLSVLTILNLASNKIQKVEAG 528
L N I +L L LN++ N + E
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG-EIP 285
Query: 529 TFDNNSNLVAIRLDGN 544
N N
Sbjct: 286 QGGNLQRFDVSAYANN 301
Score = 31.3 bits (69), Expect = 0.83
Identities = 33/235 (14%), Positives = 56/235 (23%), Gaps = 12/235 (5%)
Query: 710 NKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTC 769
N P L L L PAI ++ + A
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 770 PNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDA-------TELYLDGNRIPVVGSHS 822
N + S + N++ IP T + + NR+ +
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193
Query: 823 FIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYL 882
F S ++ G + + +NL L L
Sbjct: 194 FANLN--LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDL 251
Query: 883 QYNKIIYISNRTFLSLTHLKVLQLDHNRITSF--AVWHLSSQIQSITLTSNPWSC 935
+ N+I + L L L + N + +L +N C
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQR-FDVSAYANNKCLC 305
Score = 29.3 bits (64), Expect = 3.1
Identities = 16/88 (18%), Positives = 24/88 (27%), Gaps = 7/88 (7%)
Query: 146 HNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSN 205
+ ++L LDL N I+ L+ L LN++ N L
Sbjct: 223 TQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 206 VATFSFSNYDTARCGINLRVLDLSNNSF 233
N V +NN
Sbjct: 283 EIP-QGGNLQ------RFDVSAYANNKC 303
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 48.1 bits (113), Expect = 2e-06
Identities = 37/235 (15%), Positives = 81/235 (34%), Gaps = 26/235 (11%)
Query: 190 LQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQE 249
L + + ++ +++ T + + + L ++ EG L+ L
Sbjct: 18 LANAIKIAAGKSNVTDTVTQADLD--------GITTLSAFGTGVTTI--EGVQYLNNLIG 67
Query: 250 LYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLA 309
L L+ N +T LA + L+ + V+ L + + +
Sbjct: 68 LELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAG 127
Query: 310 PGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRL 369
VL + + + L ++ D + +L +L
Sbjct: 128 LSNLQVLYLDLNQITNISPLAGLTNLQ------------YLSIGNAQVSDLTPLANLSKL 175
Query: 370 QVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDN 424
L ++N+I I + ASL NL + + NN++ + L + + L +++L N
Sbjct: 176 TTLKADDNKISDI--SPLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTN 226
Score = 44.3 bits (103), Expect = 4e-05
Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 18/224 (8%)
Query: 266 DGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLS 325
L + + +N+ + + + + + + L LI L+L
Sbjct: 16 PALANAIKIAAGKSNVTDTVTQ--ADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELK 71
Query: 326 NNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRN 385
+N++T+ + N N K L + + +
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 386 TFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFH 445
L I + + L + + + + L N + L
Sbjct: 132 QV--LYLDLNQITNISPLAGLTNLQYL----------SIGNAQVSDLTPLANLSKLTTLK 179
Query: 446 LNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLS-LNSLHQL 488
+ NK+++I L +L +L + L +N I++++ L+ ++L +
Sbjct: 180 ADDNKISDISP-LASLPNLIEVHLKNNQISDVSPLANTSNLFIV 222
Score = 42.7 bits (99), Expect = 1e-04
Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 14/219 (6%)
Query: 347 VLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRI 406
+ IA K N D+ DL + L + +I L+NL L + +N++ +
Sbjct: 21 AIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDL 78
Query: 407 ESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKT 466
L+ ++ ++ + + L L +L+
Sbjct: 79 APLK-----NLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 467 LDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVE 526
L L N IT I+ L+ + Q + N LS LT L NKI +
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYL----SIGNAQVSDLTPLANLSKLTTLKADDNKISDIS 189
Query: 527 AGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNIS 565
+ NL+ + L N ++D+ L NL + ++
Sbjct: 190 P--LASLPNLIEVHLKNNQISDVSPL-ANTSNLFIVTLT 225
Score = 42.7 bits (99), Expect = 1e-04
Identities = 34/214 (15%), Positives = 65/214 (30%), Gaps = 22/214 (10%)
Query: 460 NLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLAS 519
L + + G + +T+ ++ L + L ++ I + L+ L L L
Sbjct: 17 ALANAIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKD 72
Query: 520 NKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPA 579
N+I + + + + + L + +
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 580 DLQWLDIHGNQISELGNYF----------------EIESQLRLTYFDASSNKLTELTGNA 623
L IS L + + +LT A NK+++++ A
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLA 192
Query: 624 IPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDL 657
++ + L NN IS V P NL V L
Sbjct: 193 SLPNLIEVHLKNNQISDVSPLANT--SNLFIVTL 224
Score = 38.9 bits (89), Expect = 0.002
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 6/167 (3%)
Query: 742 QFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRI 801
L + L + N ++ ++ +
Sbjct: 66 IGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL 125
Query: 802 PMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDN 861
+ L + + G LQ L + + + L +L L+ DDN
Sbjct: 126 AGLSNLQVLYLDLNQITNISPLAGLTNLQYL--SIGNAQVSDLTPLANLSKLTTLKADDN 183
Query: 862 RLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDH 908
++++I L NL E++L+ N+I +S + ++L ++ L +
Sbjct: 184 KISDIS--PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
Score = 34.2 bits (77), Expect = 0.065
Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 7/200 (3%)
Query: 104 SPGSFQTLIDLKDLSVEFCKIGNLSAGSFRGLRKLKTLTLR-THNTDWSTMSLDISHNVF 162
+ L + LS + + + L L L L+ TD + +
Sbjct: 33 DTVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKITEL 90
Query: 163 TDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGIN 222
L+++ + + + L + + +
Sbjct: 91 ELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGL 150
Query: 223 LRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLV 282
+ LS + + LS+L L N ++ + L L +L ++L N +
Sbjct: 151 TNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI--SPLASLPNLIEVHLKNNQIS 208
Query: 283 NIPPELFNQSRDLKEVYLQN 302
++ P + +L V L N
Sbjct: 209 DVSP--LANTSNLFIVTLTN 226
Score = 34.2 bits (77), Expect = 0.071
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 849 GLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDH 908
L I + + +T+ L+ + L + I L +L L+L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKD 72
Query: 909 NRITSFAVWHLSSQIQSITLTSNPWSCDCDF 939
N+IT A ++I + L+ NP
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAI 103
Score = 34.2 bits (77), Expect = 0.071
Identities = 34/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)
Query: 154 SLDISHNVFTD-----ELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVAT 208
+L T L +L L+L N I L + L+ K +
Sbjct: 45 TLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIA 104
Query: 209 FSFS--------NYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFL 260
S T + + YL
Sbjct: 105 GLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS 164
Query: 261 ADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLI 320
L L+ LT L N + +I P +L EV+L+NN I+ ++P + L
Sbjct: 165 DLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLF 220
Query: 321 VLDLSN 326
++ L+N
Sbjct: 221 IVTLTN 226
Score = 34.2 bits (77), Expect = 0.073
Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 16/203 (7%)
Query: 156 DISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFS-FSNY 214
+++ V +L + +L + T+ L +L L L N+++++A +
Sbjct: 30 NVTDTVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKI 87
Query: 215 DTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVL 274
N + S+ + L G + L+ + +++ L
Sbjct: 88 TELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPL 147
Query: 275 -------NLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNN 327
LS+ N L + +N I+ ++P L LI + L NN
Sbjct: 148 AGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNN 205
Query: 328 ELTEEWVNAATFSGLHRLVVLNI 350
++++ + + L ++ +
Sbjct: 206 QISDV----SPLANTSNLFIVTL 224
Score = 33.9 bits (76), Expect = 0.10
Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 13/224 (5%)
Query: 412 DSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGD 471
+L ++ + + + + + G +T I ++ L++L L+L D
Sbjct: 16 PALANAIKIAAGKSNV--TDTVTQADLDGITTLSAFGTGVTTIEG-VQYLNNLIGLELKD 72
Query: 472 NLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFD 531
N IT++ L + L + G+ ++ ++
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 532 NNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQI 591
+ + + L + L ++ L L L N+I
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSK-------LTTLKADDNKI 185
Query: 592 SELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTN 635
S++ + S L +N++++++ A ++ + LTN
Sbjct: 186 SDI---SPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTN 226
Score = 28.8 bits (63), Expect = 3.3
Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 20/198 (10%)
Query: 388 ASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLN 447
+L+N + + + ++ + L ++ LS + IE ++ +L L
Sbjct: 16 PALANAIKIAAGKSNV--TDTVTQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELK 71
Query: 448 GNKLTEIP---------------KVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLR 492
N++T++ L+N+ ++ L L ++ +
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 493 LTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGL 552
N + + + L+ Q + N S L ++ D N ++DI
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP- 190
Query: 553 FPKLPNLVWLNISENLLE 570
LPNL+ +++ N +
Sbjct: 191 LASLPNLIEVHLKNNQIS 208
Score = 28.8 bits (63), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 871 FERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLSSQIQSITLT 929
L L L NKI IS SL +L + L +N+I+ + +S + +TLT
Sbjct: 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLT 225
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 48.0 bits (112), Expect = 5e-06
Identities = 48/344 (13%), Positives = 104/344 (30%), Gaps = 29/344 (8%)
Query: 162 FTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGI 221
F+ E +SL+ ++ ++ + S+ + L+ N + A S +
Sbjct: 3 FSIEGKSLKLDAITTEDEKSVFAVLLE-DDSVKEIVLSGNTIGTEAARWLS--ENIASKK 59
Query: 222 NLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNL 281
+L + + S+ + E L L + L+ L + + + +
Sbjct: 60 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSK 119
Query: 282 VNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVL---TQLIVLDLSNNELTEEWVNA-- 336
L+ + L + + + L + N L +
Sbjct: 120 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 179
Query: 337 ATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHL---------ENNQIESIHRNTF 387
TF L + + N + L + S
Sbjct: 180 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 239
Query: 388 ASLSNLHTLIMSNNKLKR------IESNSLDSLTALSVLSLDNNELE-----YIEENALK 436
S NL L +++ L +++ S L L L NE+E ++ +
Sbjct: 240 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE 299
Query: 437 NSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNL 480
L LNGN+ +E V+ + + + G + E++++
Sbjct: 300 KMPDLLFLELNGNRFSEEDDVVDEIREVFST-RGRGELDELDDM 342
Score = 46.0 bits (107), Expect = 2e-05
Identities = 53/335 (15%), Positives = 104/335 (31%), Gaps = 16/335 (4%)
Query: 220 GINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADH----ALDGLNSLTVLN 275
G +L++ ++ S+ A ++E+ L GN + A + L +
Sbjct: 7 GKSLKLDAITTEDEKSVFAV-LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAE 65
Query: 276 LSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVL-TQLIVLDLSNNELTEEWV 334
S + E+ R L + L+ ++ + T L ++ T
Sbjct: 66 FSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEH 125
Query: 335 NAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLH 394
+GL IA + K+ L+ + N++E+ +A H
Sbjct: 126 LYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 185
Query: 395 TLIMSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEI 454
L+ + ++ + + L + L + + + T L L +
Sbjct: 186 RLLHTVKMVQNGIRP--EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 243
Query: 455 PKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISN-----ISKGVFEKL 509
L+ G + ++ S L LRL N I + + EK+
Sbjct: 244 NLRELGLNDCLLSARGAAAV--VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 301
Query: 510 SVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGN 544
L L L N+ E D + + R G
Sbjct: 302 PDLLFLELNGNRF-SEEDDVVDEIREVFSTRGRGE 335
Score = 40.6 bits (93), Expect = 0.001
Identities = 37/321 (11%), Positives = 83/321 (25%), Gaps = 20/321 (6%)
Query: 264 ALDGLNSLTVLNLSVNNL----VNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQL 319
L +S+ + LS N + E +DL+ + + I L L
Sbjct: 26 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL 85
Query: 320 IVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYR-LQVLHLENNQ 378
+ L +L ++ F + +++ + + +
Sbjct: 86 LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARAL 145
Query: 379 IESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVLSLDNNEL---EYIEENAL 435
E + L ++I N+L+ L + E
Sbjct: 146 QELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH 205
Query: 436 KNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTE 495
L + S + L L+ L
Sbjct: 206 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS-------AR 258
Query: 496 NNISNISKGVFEKLSVLTILNLASNKI-----QKVEAGTFDNNSNLVAIRLDGNYLTDIG 550
+ + + L L L N+I + ++ + +L+ + L+GN ++
Sbjct: 259 GAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 318
Query: 551 GLFPKLPNLVWLNISENLLEW 571
+ ++ + L E
Sbjct: 319 DVVDEIREVFSTRGRGELDEL 339
Score = 39.9 bits (91), Expect = 0.002
Identities = 12/97 (12%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 410 SLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTE-----IPKVLRNLHSL 464
S++ +L + ++ + + + L S+++ L+GN + + + + + L
Sbjct: 4 SIEGK-SLKLDAITTEDEKSVFA-VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDL 61
Query: 465 KTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNI 501
+ + D + + +L L L + +
Sbjct: 62 EIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTV 98
Score = 37.9 bits (86), Expect = 0.007
Identities = 41/341 (12%), Positives = 94/341 (27%), Gaps = 19/341 (5%)
Query: 291 QSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVN--AATFSGLHRLVVL 348
+ + LK + + + + + LS N + E + + L +
Sbjct: 6 EGKSLKLDAITTEDEKSVFAVLLE-DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 349 NIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTL---IMSNNKLKR 405
+ ++ I + L L L+ ++ ++ + A +S +
Sbjct: 65 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 124
Query: 406 IESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLK 465
+ L + + E KN+ L+ N+L
Sbjct: 125 HLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184
Query: 466 TLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKV 525
L + + H L + + + + + K
Sbjct: 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 244
Query: 526 EAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPA------ 579
N+ + G + L L + N +E +
Sbjct: 245 LRELGLNDCL---LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 301
Query: 580 -DLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTEL 619
DL +L+++GN+ SE ++ ++R + +L EL
Sbjct: 302 PDLLFLELNGNRFSEED---DVVDEIREVFSTRGRGELDEL 339
Score = 37.6 bits (85), Expect = 0.008
Identities = 27/339 (7%), Positives = 70/339 (20%), Gaps = 36/339 (10%)
Query: 580 DLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLIS 639
L+ I + + + S N + + ++ +
Sbjct: 9 SLKLDAITTEDEKSVFA--VLLEDDSVKEIVLSGNTIGTEAARWLSENIASK-------- 58
Query: 640 KVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQCDCNMQW 699
+L + + +P + + + P +
Sbjct: 59 ----------KDLEIAEFSDIFTGRVK------DEIPEALRLLLQALLKCPKLHTVRLSD 102
Query: 700 LQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCD 759
+E L + L+N +
Sbjct: 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS 162
Query: 760 FDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGNRIPVVG 819
+ + + + + L +
Sbjct: 163 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA---YCQELKV 219
Query: 820 SHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRE 879
+ +++ N GL + ++ + + L+
Sbjct: 220 LDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS--ARGAAAVVDAFSKLENIGLQT 277
Query: 880 LYLQYNKI-----IYISNRTFLSLTHLKVLQLDHNRITS 913
L LQYN+I + + L L+L+ NR +
Sbjct: 278 LRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316
Score = 34.1 bits (76), Expect = 0.11
Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Query: 146 HNTDWSTMSLDISHNVFTDELQSLESLDLSMNSI-----WTLPDAIFCPLQSLSYLNLTQ 200
+ + + E L++L L N I TL I + L +L L
Sbjct: 252 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNG 311
Query: 201 NKLS 204
N+ S
Sbjct: 312 NRFS 315
Score = 33.7 bits (75), Expect = 0.14
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Query: 313 FNVLTQLIVLDLSNNELTEEWVNA---ATFSGLHRLVVLNIAYNKMNKLDSSI------F 363
L L L NE+ + V + L+ L + N+ ++ D + F
Sbjct: 269 KLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVF 328
Query: 364 KDLYRLQVLHLENNQ 378
R ++ L++ +
Sbjct: 329 STRGRGELDELDDME 343
Score = 33.3 bits (74), Expect = 0.20
Identities = 41/344 (11%), Positives = 86/344 (25%), Gaps = 29/344 (8%)
Query: 345 LVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFA----SLSNLHTLIMSN 400
L + I + + + + ++ + L N I + + S +L S+
Sbjct: 10 LKLDAITTEDEKSVFAVL-LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 401 NKLKRIESNSLDSLTALSVLSLDNNEL----EYIEENALKNSTSLQDFHLNGNKLTEIPK 456
R++ ++L L L +L L DF L +
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 457 VLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILN 516
L + L N + L + N + N S + K L
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 517 LASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYAL 576
+Q + L + + + + L
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLA---YCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 245
Query: 577 IPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNN 636
L + + + + F + L N++ + ++
Sbjct: 246 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM---- 301
Query: 637 LISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKN 680
P+L ++L GNR + I + S +
Sbjct: 302 -------------PDLLFLELNGNRFSEEDDVVDEIREVFSTRG 332
Score = 32.5 bits (72), Expect = 0.29
Identities = 35/380 (9%), Positives = 88/380 (23%), Gaps = 61/380 (16%)
Query: 512 LTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTD-----IGGLFPKLPNLVWLNISE 566
L + + + + V + ++ I L GN + + +L S+
Sbjct: 10 LKLDAITTEDEKSV-FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 567 NLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPH 626
IP L+ L + +L ++ + + L + P
Sbjct: 69 IFT-GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA----FGPTAQEPLIDFLSKHTPL 123
Query: 627 SVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYI 686
L ++ + +N +
Sbjct: 124 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS---------IICGRNRLENGS 174
Query: 687 GENPFQCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCE 746
+ + + + L + + + I + E
Sbjct: 175 MKEWAKTFQSHRLLHTVKMVQ------------------NGIRPEGIEHLLLEGLAYCQE 216
Query: 747 YETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDAT 806
+ + + + + + + +
Sbjct: 217 LKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQ 276
Query: 807 ELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEI 866
L L N I V T+ + +L+ L L+ NR +E
Sbjct: 277 TLRLQYNEI-------------------ELDAVRTLKTVIDEKMPDLLFLELNGNRFSE- 316
Query: 867 RGYEFERLENLRELYLQYNK 886
E + ++ +RE++ +
Sbjct: 317 ---EDDVVDEIREVFSTRGR 333
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 43.0 bits (100), Expect = 5e-05
Identities = 16/106 (15%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 862 RLTE---IRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWH 918
+LT + ++ REL L+ KI I N +L + N I +
Sbjct: 2 KLTAELIEQAAQYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDGFP 60
Query: 919 LSSQIQSITLTSNPWSCDCDFTEKFRDYLQRSRSSVHDISQIRCMT 964
L +++++ + +N + ++ L + + + ++ +
Sbjct: 61 LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLD 106
Score = 42.2 bits (98), Expect = 8e-05
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 280 NLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATF 339
L+ + N R +E+ L+ I V+ + L Q +D S+NE+ + F
Sbjct: 6 ELIEQAAQYTNAVR-DRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLD----GF 59
Query: 340 SGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFAS-LSNLHTLIM 398
L RL L + N++ ++ + + L L L L NN + + + L +L L +
Sbjct: 60 PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCI 119
Query: 399 SNNKLKRIESNSLDSLTALSVL-SLDNNELEYIE 431
N + + L + + + LD +++ E
Sbjct: 120 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 153
Score = 41.8 bits (97), Expect = 1e-04
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 437 NSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTEN 496
N+ ++ L G K+ I + L +D DN I +++ L +L L + N
Sbjct: 16 NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTLLVNNN 73
Query: 497 NISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNN-SNLVAIRLDGNYLTDIGG---- 551
I I +G+ + L LT L L +N + ++ + +L + + N +T+
Sbjct: 74 RICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLY 133
Query: 552 LFPKLPNLVWLN 563
+ K+P + L+
Sbjct: 134 VIYKVPQVRVLD 145
Score = 41.1 bits (95), Expect = 2e-04
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 13/154 (8%)
Query: 198 LTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNIL 257
LT + A ++N + R LDL + + L + + N +
Sbjct: 3 LTAELIEQAA--QYTN------AVRDRELDLRGYKIPVIENL-GATLDQFDAIDFSDNEI 53
Query: 258 TFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFN-VL 316
L L L L ++ N + I L DL E+ L NNS+ L L
Sbjct: 54 RKLDGFP--LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASL 111
Query: 317 TQLIVLDLSNNELT-EEWVNAATFSGLHRLVVLN 349
L L + N +T ++ + ++ VL+
Sbjct: 112 KSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145
Score = 37.6 bits (86), Expect = 0.003
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 517 LASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYAL 576
L + I+ +A + N + L G + I L L ++ S+N + D
Sbjct: 3 LTAELIE--QAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFP 60
Query: 577 IPADLQWLDIHGNQISELGNYFEIESQLRLTYF--DASSNKLTELTGNAIPHSVENLFLT 634
+ L+ L ++ N+I +G + + S +L +L A S+ L +
Sbjct: 61 LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCIL 120
Query: 635 NNLISKVQPY---TFFMKPNLTRVD 656
N ++ + Y + P + +D
Sbjct: 121 RNPVTNKKHYRLYVIYKVPQVRVLD 145
Score = 37.6 bits (86), Expect = 0.003
Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 12/155 (7%)
Query: 564 ISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNA 623
++ L+E + LD+ G +I + N Q D S N++ +L G
Sbjct: 3 LTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFD--AIDFSDNEIRKLDGFP 60
Query: 624 IPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPD 683
+ ++ L + NN I ++ P+LT + L N L L +
Sbjct: 61 LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE----------LGDLDPLAS 110
Query: 684 FYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLD 718
+ + Y + P + LD
Sbjct: 111 LKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145
Score = 34.1 bits (77), Expect = 0.046
Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 6/133 (4%)
Query: 820 SHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEIRGYEFERLENLRE 879
+ + + + L L + I N L + + DN + ++ G+ L L+
Sbjct: 11 AAQYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDGF--PLLRRLKT 67
Query: 880 LYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSF---AVWHLSSQIQSITLTSNPWSCD 936
L + N+I I +L L L L +N + + + + NP +
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 937 CDFTEKFRDYLQR 949
+ + +
Sbjct: 128 KHYRLYVIYKVPQ 140
Score = 31.4 bits (70), Expect = 0.38
Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 4/144 (2%)
Query: 407 ESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKT 466
++ + L L ++ I EN + N++ ++ L LKT
Sbjct: 10 QAAQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDGF-PLLRRLKT 67
Query: 467 LDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEK-LSVLTILNLASNKIQKV 525
L + +N I I +L L L LT N++ + L LT L + N +
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 526 EAGTFDNNSNLVAIR-LDGNYLTD 548
+ + +R LD +
Sbjct: 128 KHYRLYVIYKVPQVRVLDFQKVKL 151
Score = 31.1 bits (69), Expect = 0.42
Identities = 7/45 (15%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 166 LQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFS 210
LDL I + + + L ++ + N++ + F
Sbjct: 17 AVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDGFP 60
Score = 29.9 bits (66), Expect = 1.3
Identities = 18/132 (13%), Positives = 38/132 (28%), Gaps = 16/132 (12%)
Query: 155 LDISHNVFTD------ELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVAT 208
LD+ L +++D S N I L L ++N
Sbjct: 23 LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLR-------RLKTLLVNNNRI 75
Query: 209 FSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADH---AL 265
++ +N+ + + + L L L + N +T + +
Sbjct: 76 CRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVI 135
Query: 266 DGLNSLTVLNLS 277
+ + VL+
Sbjct: 136 YKVPQVRVLDFQ 147
Score = 27.2 bits (59), Expect = 7.8
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 807 ELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHNKTFNGLKELIILRLDDNRLTEI 866
EL L G +IPV+ + + + + + + + F L+ L L +++NR+ I
Sbjct: 22 ELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNNNRICRI 78
Query: 867 RGYEFERLENLRELYLQYNKIIYISNRTFLS-LTHLKVLQLDHNRITSFAVWHLS 920
+ L +L EL L N ++ + + L+ L L L + N +T+ + L
Sbjct: 79 GEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLY 133
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 40.9 bits (94), Expect = 2e-04
Identities = 22/149 (14%), Positives = 45/149 (30%), Gaps = 2/149 (1%)
Query: 270 SLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNEL 329
+ L + + ++ L + + L L +L L + + L
Sbjct: 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 330 TEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFAS 389
+A F+ RL LN+++N + L + L +++ N S
Sbjct: 69 RFVAPDAFHFT--PRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQR 126
Query: 390 LSNLHTLIMSNNKLKRIESNSLDSLTALS 418
+ KL+ L + S
Sbjct: 127 WEEEGLGGVPEQKLQCHGQGPLAHMPNAS 155
Score = 40.2 bits (92), Expect = 4e-04
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%)
Query: 861 NRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQLDHNRITSFAVWHLS 920
L + + L LR L + + + +++ F L L L N + S + +
Sbjct: 42 QHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ 101
Query: 921 SQIQSITLTS-NPWSCDCDFTEKFRDYLQRSRSSVHDISQIRCMTGSEV 968
+ S NP C C + + + V + +++C +
Sbjct: 102 GLSLQELVLSGNPLHCSCALRW-LQRWEEEGLGGVPE-QKLQCHGQGPL 148
Score = 30.9 bits (68), Expect = 0.47
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Query: 188 CPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRL 247
C S L T++ + + I + L L L
Sbjct: 5 CCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIE------NQQHLQHLELRDLRGLGEL 58
Query: 248 QELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNN 303
+ L + + L F+A A L+ LNLS N L ++ + + V N
Sbjct: 59 RNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNP 114
Score = 30.9 bits (68), Expect = 0.54
Identities = 15/137 (10%), Positives = 37/137 (27%), Gaps = 24/137 (17%)
Query: 606 LTYFDASSNKLTELTGN--AIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLK 663
+ + + + + + E + ++ L + +V + L+
Sbjct: 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR 69
Query: 664 NI------------------NQTALRISPLPSHKNIPDFYIGENPFQCDCNMQWLQSYSV 705
+ N ++ + + NP C C ++WLQ +
Sbjct: 70 FVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRW-- 127
Query: 706 NKERNKPNLVDLDTVTC 722
E V + C
Sbjct: 128 --EEEGLGGVPEQKLQC 142
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 40.0 bits (92), Expect = 7e-04
Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 21/225 (9%)
Query: 299 YLQNNSINVLAP--GIF--NVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNK 354
L + +I V P IF + + I +L +T+ T + L+ + + +
Sbjct: 2 PLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAV----TQNELNSIDQIIANNSD 57
Query: 355 MNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSL 414
+ + + L + L L N++ I A+L NL L + NK+K + S
Sbjct: 58 IKSVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKK 113
Query: 415 TALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLI 474
+ N L + L+ +L NK+T+I + R + +
Sbjct: 114 LKSL----SLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQIS 169
Query: 475 TEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLAS 519
+ L L +L L L++N+IS++ L L +L L S
Sbjct: 170 DIVP---LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFS 209
Score = 37.3 bits (85), Expect = 0.005
Identities = 30/180 (16%), Positives = 66/180 (36%), Gaps = 14/180 (7%)
Query: 156 DISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFS----- 210
++ V +EL S++ + + + I ++ + P +++ L L NKL+++ +
Sbjct: 35 SVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLP--NVTKLFLNGNKLTDIKPLANLKNL 92
Query: 211 ----FSNYDTARCGINLRVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALD 266
+ L + S + + L L +L + D +
Sbjct: 93 GWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVL 152
Query: 267 GLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSN 326
+ +N ++ L ++ L+ +YL N I+ L L L VL+L +
Sbjct: 153 SRLTKLDTLSLEDNQISDIVPLAGLTK-LQNLYLSKNHISDLRA--LAGLKNLDVLELFS 209
Score = 36.5 bits (83), Expect = 0.011
Identities = 35/195 (17%), Positives = 71/195 (36%), Gaps = 22/195 (11%)
Query: 244 LSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQNN 303
+ + L+ +T + LNS+ + + +++ ++ ++ +++L N
Sbjct: 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 304 SI--------------NVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLN 349
+ L L+ L L + E + +H + +
Sbjct: 79 KLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLES 138
Query: 350 IAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESN 409
+ D ++ L +L L LE+NQI I A L+ L L +S N + +
Sbjct: 139 LYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISDLR-- 194
Query: 410 SLDSLTALSVLSLDN 424
+L L L VL L +
Sbjct: 195 ALAGLKNLDVLELFS 209
Score = 36.5 bits (83), Expect = 0.012
Identities = 38/195 (19%), Positives = 68/195 (34%), Gaps = 13/195 (6%)
Query: 347 VLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRI 406
+ K + D+ +L + + N+ I+S+ L N+ L ++ NKL I
Sbjct: 26 TIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI 83
Query: 407 ESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKT 466
L L L + +++ + + L +L L++
Sbjct: 84 -----KPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLES 138
Query: 467 LDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVE 526
L LG+N IT+I LS + + + L+ L L L+ N I +
Sbjct: 139 LYLGNNKITDITVLSRLTKLDTL----SLEDNQISDIVPLAGLTKLQNLYLSKNHISDLR 194
Query: 527 AGTFDNNSNLVAIRL 541
A NL + L
Sbjct: 195 A--LAGLKNLDVLEL 207
Score = 36.1 bits (82), Expect = 0.013
Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 16/208 (7%)
Query: 360 SSIFKD--LYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTAL 417
IF D +L+ + T L+++ +I +N+ +K + + L +
Sbjct: 15 KQIFSDDAFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNV 70
Query: 418 SVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEI 477
+ L L+ N+L I+ A + N K K L+ L SL G + I +
Sbjct: 71 TKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGL 130
Query: 478 NNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLV 537
+L +N + + + L+ Q + + L
Sbjct: 131 VHLPQLESLY---------LGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQ 181
Query: 538 AIRLDGNYLTDIGGLFPKLPNLVWLNIS 565
+ L N+++D+ L NL L +
Sbjct: 182 NLYLSKNHISDLRA-LAGLKNLDVLELF 208
Score = 35.8 bits (81), Expect = 0.017
Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%)
Query: 468 DLGDNLIT---EINNL-SLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQ 523
LG IT I + S ++ + L + ++++ +L+ + + ++ I+
Sbjct: 2 PLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 59
Query: 524 KVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPADLQW 583
V+ N+ + L+GN LTD L NL L DL+
Sbjct: 60 SVQG--IQYLPNVTKLFLNGNKLTD----IKPLANLKNLGWLFLDENKVKDLSSLKDLKK 113
Query: 584 LDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQP 643
L + + + + + +L +NK+T++T + ++ L L +N IS + P
Sbjct: 114 LKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP 173
Query: 644 YTFFMKPNLTRVDLVGNRLKNIN 666
L + L N + ++
Sbjct: 174 LAGL--TKLQNLYLSKNHISDLR 194
Score = 34.2 bits (77), Expect = 0.068
Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 5/168 (2%)
Query: 111 LIDLKDLSVEFCKIGNLSAGSFRGLRKLKTLTLRTHNTDWSTMSLDISHNVFTDELQSLE 170
L + + I ++ + L + L L + ++ + + ++
Sbjct: 45 LNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKV 102
Query: 171 SLDLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSN 230
S+ + L L + L LD +
Sbjct: 103 KDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLS 162
Query: 231 NSFDSLPA-EGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLS 277
+ + + L++LQ LYL N ++ L AL GL +L VL L
Sbjct: 163 LEDNQISDIVPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELF 208
Score = 33.4 bits (75), Expect = 0.12
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 3/130 (2%)
Query: 754 LCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELYLDGN 813
L + D+S ++ + ++ I L+
Sbjct: 80 LTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESL 139
Query: 814 RIPVVGSHSFIGRKKLQILFLNSSHVETIHNKT-FNGLKELIILRLDDNRLTEIRGYEFE 872
+ +L L S I + GL +L L L N ++++R
Sbjct: 140 YLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLR--ALA 197
Query: 873 RLENLRELYL 882
L+NL L L
Sbjct: 198 GLKNLDVLEL 207
Score = 33.1 bits (74), Expect = 0.16
Identities = 32/198 (16%), Positives = 75/198 (37%), Gaps = 12/198 (6%)
Query: 460 NLHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLAS 519
+L +T+ ++ N L+ + + ++I ++ + L +T L L
Sbjct: 22 AFAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNG 77
Query: 520 NKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPA 579
NK+ ++ N + + + KL +L + + + +
Sbjct: 78 NKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVH---LP 134
Query: 580 DLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIPHSVENLFLTNNLIS 639
L+ L + N+I+++ + L+ D + + L G ++NL+L+ N IS
Sbjct: 135 QLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGL---TKLQNLYLSKNHIS 191
Query: 640 KVQPYTFFMKPNLTRVDL 657
++ NL ++L
Sbjct: 192 DLRALAGL--KNLDVLEL 207
Score = 30.7 bits (68), Expect = 0.71
Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 4/151 (2%)
Query: 846 TFNGLKELIILRLDDNRLTEIRGYEFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQ 905
T N L + + +++ + ++G + L N+ +L+L NK+ I L L
Sbjct: 41 TQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLD 98
Query: 906 LDHNRITSFAVWHLSSQIQSIT--LTSNPWSCDCDFTEKFRDYLQRSRSSVHDISQIRCM 963
+ + S + S+ S+ + + + +S++ +
Sbjct: 99 ENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKL 158
Query: 964 TGSEVGFTIMRTVIPSCNVVSTNVSSHSNNN 994
+ + ++P + S N+
Sbjct: 159 DTLSLEDNQISDIVPLAGLTKLQNLYLSKNH 189
Score = 30.7 bits (68), Expect = 0.85
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 870 EFERLENLRELYLQYNKIIYISNRTFLSLTHLKVLQL 906
L L+ LYL N I + L +L VL+L
Sbjct: 173 PLAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLEL 207
Score = 28.8 bits (63), Expect = 3.0
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 138 LKTLTLRTHNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWTLPDAIFCPLQSLSYLN 197
+ L + I+ L L++L L N I + L L L
Sbjct: 127 INGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184
Query: 198 LTQNKLSNVATFSFSNYDTARCGINLRVLDLSN 230
L++N +S++ + NL VL+L +
Sbjct: 185 LSKNHISDLRALAGLK--------NLDVLELFS 209
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 38.9 bits (89), Expect = 0.002
Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Query: 301 QNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDS 360
Q+ IN + L + + L +T+ + + L ++ L + +D
Sbjct: 4 QDTPINQIFTD--TALAEKMKTVLGKTNVTDT----VSQTDLDQVTTLQADRLGIKSIDG 57
Query: 361 SIFKDLYRLQVLHLENNQIESIH----------------RNTFASLSNLHTLIMSNNKLK 404
+ L L ++ NNQ+ I + + T +
Sbjct: 58 --VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 115
Query: 405 RIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSL 464
++ ++ L+ + + +AL TSLQ + + N++T++ L NL +L
Sbjct: 116 NQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLK-PLANLTTL 174
Query: 465 KTLDLGDNLITEINNLS-LNSLHQL 488
+ LD+ N +++I+ L+ L +L L
Sbjct: 175 ERLDISSNKVSDISVLAKLTNLESL 199
Score = 36.2 bits (82), Expect = 0.013
Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 31/225 (13%)
Query: 173 DLSMNSIWTLPDAIFCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNS 232
D +N I+T L L + +++ + + + + L
Sbjct: 5 DTPINQIFTDTA-----LAEKMKTVLGKTNVTDTVSQTDLD--------QVTTLQADRLG 51
Query: 233 FDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQS 292
S+ +G L+ L ++ N + L + NQ
Sbjct: 52 IKSI--DGVEYLNNLTQINFSNN-------------QLTDITPLKNLTKLVDILMNNNQI 96
Query: 293 RDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAY 352
D+ + N + + + N L + S L L L
Sbjct: 97 ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLN 156
Query: 353 NKMNKLDSSI-FKDLYRLQVLHLENNQIESIHRNTFASLSNLHTL 396
N++ +L L+ L + +N++ I + A L+NL +L
Sbjct: 157 FSSNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESL 199
Score = 33.1 bits (74), Expect = 0.13
Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 13/176 (7%)
Query: 446 LNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINNLS-LNSLHQLAGLRLTENNISNISKG 504
L +T+ +L + TL I I+ + LN+L Q+ N SN
Sbjct: 25 LGKTNVTDTVS-QTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI--------NFSNNQLT 75
Query: 505 VFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGNYLTDIGGLFPKLPNLVWLNI 564
L LT L ++ T N + N L NL L +
Sbjct: 76 DITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 135
Query: 565 SENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELT 620
S N + LQ L+ NQ+++L + + L D SSNK+++++
Sbjct: 136 SSNTISDISALSGLTSLQQLNFSSNQVTDL---KPLANLTTLERLDISSNKVSDIS 188
Score = 31.6 bits (70), Expect = 0.38
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 13/190 (6%)
Query: 347 VLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRI 406
+ K N D+ DL ++ L + I+SI L+NL + SNN +
Sbjct: 20 KMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNN--QLT 75
Query: 407 ESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKT 466
+ L +LT L + ++NN++ I A + + N + K L NL+ L+
Sbjct: 76 DITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 135
Query: 467 LDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVE 526
+ I+ ++ L+ + ++T+ L+ L L+++SNK+ +
Sbjct: 136 SSNTISDISALSGLTSLQQLNFSSNQVTDLK-------PLANLTTLERLDISSNKVSDIS 188
Query: 527 AGTFDNNSNL 536
+NL
Sbjct: 189 V--LAKLTNL 196
Score = 31.2 bits (69), Expect = 0.58
Identities = 34/181 (18%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Query: 485 LHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAIRLDGN 544
L + L + N+++ L +T L I+ ++ + +NL I N
Sbjct: 17 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNN 72
Query: 545 YLTDIGGLFPKLPNLVWLNISENLLEWFDYALIPADLQWLDIHGNQISELGNYFEIESQL 604
LTD L NL L A+L L +++ + +++
Sbjct: 73 QLTD----ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 128
Query: 605 RLTYFDASSNKLTELTGNAIPHSVENLFLTNNLISKVQPYTFFMKPNLTRVDLVGNRLKN 664
L + SSN +++++ + S++ L ++N ++ ++P L R+D+ N++ +
Sbjct: 129 NLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANL--TTLERLDISSNKVSD 186
Query: 665 I 665
I
Sbjct: 187 I 187
Score = 31.2 bits (69), Expect = 0.60
Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 12/203 (5%)
Query: 360 SSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSV 419
+ IF D + + + + L + TL +K I+ ++ L L+
Sbjct: 9 NQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSID--GVEYLNNLTQ 66
Query: 420 LSLDNNELEYIEENALKNSTSLQDFHLNGNKLTEIPKVLRNLHSLKTLDLGDNLITEINN 479
++ NN + + LKN T L D +N N++ +I + + + +
Sbjct: 67 INFSNN--QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPL 124
Query: 480 LSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNLASNKIQKVEAGTFDNNSNLVAI 539
+L +L++L T ++IS +S + + + K N + L +
Sbjct: 125 KNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLK-------PLANLTTLERL 177
Query: 540 RLDGNYLTDIGGLFPKLPNLVWL 562
+ N ++DI L KL NL L
Sbjct: 178 DISSNKVSDISVL-AKLTNLESL 199
Score = 30.0 bits (66), Expect = 1.3
Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 3/140 (2%)
Query: 742 QFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRI 801
L + + L + N D++ AN+ + + N I
Sbjct: 62 NNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDI 121
Query: 802 PMDATELYLDGNRIPVVGSHSFIGRKKLQILFLNSSHVETIHN-KTFNGLKELIILRLDD 860
L+ + L L + + + K L L L +
Sbjct: 122 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISS 181
Query: 861 NRLTEIRGYEFERLENLREL 880
N++++I +L NL L
Sbjct: 182 NKVSDIS--VLAKLTNLESL 199
Score = 27.7 bits (60), Expect = 6.9
Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 12/166 (7%)
Query: 265 LDGLNSLTVLNLSVNNLVNIPP-ELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLD 323
L+ +T L + +I E N + Q I L V +
Sbjct: 36 QTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 95
Query: 324 LSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIH 383
+++ N + + + + L+ + L
Sbjct: 96 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 155
Query: 384 RNT---------FASLSNLHTLIMSNNKLKRIESNSLDSLTALSVL 420
+ A+L+ L L +S+NK+ I L LT L L
Sbjct: 156 NFSSNQVTDLKPLANLTTLERLDISSNKVSDIS--VLAKLTNLESL 199
Score = 27.3 bits (59), Expect = 9.3
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 870 EFERLENLRELYLQYNKIIYISNRTFLSLTHLKVL 904
L L L + NK+ IS LT+L+ L
Sbjct: 167 PLANLTTLERLDISSNKVSDISV--LAKLTNLESL 199
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 38.5 bits (88), Expect = 0.002
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 427 LEYIEENALKNSTSLQDFHLNGN--KLTEIPKVLRNLHSLKTLDLGDNLITEINNLS-LN 483
+ EE +T + L+G + ++ L L + K L L N I +I++LS +
Sbjct: 11 IRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGME 70
Query: 484 SLHQL 488
+L L
Sbjct: 71 NLRIL 75
Score = 31.2 bits (69), Expect = 0.55
Identities = 20/125 (16%), Positives = 35/125 (28%), Gaps = 8/125 (6%)
Query: 845 KTFNGLKELIILRLDDNRLT------EIRGYEFERLENLRELYLQYNKIIYISNRTFLSL 898
+ F K ++ + L E L+ + L L N I IS+ +
Sbjct: 12 RIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISS--LSGM 69
Query: 899 THLKVLQLDHNRITSFAVWHLSSQIQSITLTSNPWSCDCDFTEKFRDYLQRSRSSVHDIS 958
+L++L L N I + S EK + S+ +
Sbjct: 70 ENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITN 129
Query: 959 QIRCM 963
Sbjct: 130 WGEID 134
Score = 30.4 bits (67), Expect = 1.0
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 372 LHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLDSLTALSVL 420
LH IE + T ++L L +S N +++I SL + L +L
Sbjct: 30 LHGMIPPIEKMD-ATLSTLKACKHLALSTNNIEKIS--SLSGMENLRIL 75
Score = 28.5 bits (62), Expect = 4.3
Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 6/177 (3%)
Query: 176 MNSIWTLPDAI--FCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLSNNSF 233
M T+ DAI F +S+ + +L + T + L LS N+
Sbjct: 1 MAKATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI 60
Query: 234 DSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNLVNIPPELFNQSR 293
+ + S + L+ L L N++ LD + N + +
Sbjct: 61 EKIS--SLSGMENLRILSLGRNLIKK--IENLDAVADTLEELWISYNQIASLSGIEKLVN 116
Query: 294 DLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNI 350
N N L +L L L+ N L ++ S VV +
Sbjct: 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173
Score = 27.3 bits (59), Expect = 8.4
Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Query: 244 LSRLQELYLQGNILTFLA-DHALDGLNSLTVLNLSVNNLVNIPPELFNQSRDLKEVYLQN 302
+ +++ L G I D L L + L LS NN+ I + +L+ + L
Sbjct: 22 ATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISS--LSGMENLRILSLGR 79
Query: 303 NSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGLHRLVVLNIAYNKMNKLDSSI 362
N I I N+ L+ + + ++ V+ N +
Sbjct: 80 NLIKK----IENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDK 135
Query: 363 FKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNKLKRIESNSLD 412
L +L+ L L N + + ++ A+ ++ LK+++ +D
Sbjct: 136 LAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDGMPVD 185
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 38.5 bits (88), Expect = 0.003
Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 25/297 (8%)
Query: 224 RVLDLSNNSFDSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLNLSVNNL-V 282
+ LDL+ + + + + + ++LS + + V
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQG-VIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIEV 60
Query: 283 NIPPELFNQSRDLKEVYLQNNSINVLAPGIFNVLTQLIVLDLSNNELTEEWVNAATFSGL 342
+ + +Q L+ + L+ ++ + L+ L+LS E+ S
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 343 HRLVVLNIAYNKMNKLDSSIFKDLYRLQVLHLENNQIESIHRNTFASLSNLHTLIMSNNK 402
RL LN+++ E + ++ + + N +
Sbjct: 121 SRLDELNLSWCFD-----------------FTEKHVQVAVAHVSETITQLNLSGYRKNLQ 163
Query: 403 LKRIESNSLDSLTALSVLSLDNNELEYIEENALKNSTSLQDFHLNGNKL--TEIPKVLRN 460
+ + + + D+ L+ LQ L+ E L
Sbjct: 164 KSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGE 223
Query: 461 LHSLKTLDLGDNLITEINNLSLNSLHQLAGLRLTENNISNISKGVFEKLSVLTILNL 517
+ +LKTL + + L +L L++ ++ + I++ I +
Sbjct: 224 IPTLKTLQVFGIVPDGTLQLLKEALPH---LQINCSHFTTIARPTIGNKKNQEIWGI 277
Score = 35.9 bits (81), Expect = 0.023
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 171 SLDLSMNSIWTLPDAI-FCPLQSLSYLNLTQNKLSNVATFSFSNYDTARCGINLRVLDLS 229
+LDL+ ++ PD Q + ++ + FS ++ +DLS
Sbjct: 4 TLDLTGKNL--HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP-------FRVQHMDLS 54
Query: 230 NNSF-DSLPAEGFSRLSRLQELYLQGNILTFLADHALDGLNSLTVLN 275
N+ S S+ S+LQ L L+G L+ + L ++L LN
Sbjct: 55 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 101
Score = 28.1 bits (61), Expect = 6.3
Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 7/90 (7%)
Query: 126 NLSAGSFRGLRKLKTLTLRTHNTDWSTMSLDISHNVFTDELQSLESLDLSMNSIWT-LPD 184
NL L + R + + ++ +DLS + I
Sbjct: 11 NLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHF------SPFRVQHMDLSNSVIEVSTLH 64
Query: 185 AIFCPLQSLSYLNLTQNKLSNVATFSFSNY 214
I L L+L +LS+ + +
Sbjct: 65 GILSQCSKLQNLSLEGLRLSDPIVNTLAKN 94
Score = 27.8 bits (60), Expect = 7.7
Identities = 33/269 (12%), Positives = 71/269 (26%), Gaps = 27/269 (10%)
Query: 576 LIPADLQWLDIHGNQISELGNYFEIESQLRLTYFDASSNKLTELTGNAIP---HSVENLF 632
L+ + + + + E S R+ + D S++ + T + I ++NL
Sbjct: 20 LLSQGVIAFRCPRSFMDQPL--AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 77
Query: 633 LTNNLISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPDFYIGENPFQ 692
L +S T NL R++ + L + + N
Sbjct: 78 LEGLRLSDPIVNTLAKNSNLVRLN-------LSGCSGFSEFALQTLLSSCSRLDELNLSW 130
Query: 693 CDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCA 752
C + +V ++L K L ++ + +
Sbjct: 131 CFDFTEKHVQVAVAHVSETITQLNLSGY-RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLK 189
Query: 753 PLCHCCDFDACDCEMTCPNNCTCYHDVSWEA----------NVIDCSTGGYDNQLPPRIP 802
C F + + C + V G L +P
Sbjct: 190 NDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALP 249
Query: 803 MDATELYLDGNRIPVVGSHSFIGRKKLQI 831
L ++ + + + +K +I
Sbjct: 250 ----HLQINCSHFTTIARPTIGNKKNQEI 274
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 29.8 bits (67), Expect = 0.16
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 739 HSNQFLCEYETNCAPLCHCCDFDACDC-----EMTCPN 771
H+++F C + C PL CD D DC E +C
Sbjct: 5 HTDEFQCRLDGLCIPLRWRCDGDT-DCMDSSDEKSCEG 41
>d1n8yc1 c.10.2.5 (C:1-165) Protooncoprotein Her2 extracellular
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 165
Score = 31.1 bits (70), Expect = 0.40
Identities = 30/149 (20%), Positives = 48/149 (32%), Gaps = 20/149 (13%)
Query: 589 NQISELGNYFE----IESQLRLTYFDASSN-----KLTELTGN-AIPHSVENLFLTNNL- 637
+ L + ++ ++ L LTY A+++ + E+ G I H+ L
Sbjct: 19 THLDMLRHLYQGCQVVQGNLELTYVPANASLSFLQDIQEVQGYMLIAHNQVKRVPLQRLR 78
Query: 638 -----ISKVQPYTFFMKPNLTRVDLVGNRLKNINQTALRISPLPSHKNIPD--FYIGENP 690
Y + N D V LR L S I I NP
Sbjct: 79 IVRGTQLFEDKYALAVLDNRDPQDNVAASTPGRTPEGLRELQLRSLTEILKGGVLIRGNP 138
Query: 691 FQCDCNMQWLQSYSVNKERNKPNLVDLDT 719
C + V ++ N+ VD+DT
Sbjct: 139 QLC--YQDMVLWKDVFRKNNQLAPVDIDT 165
>d1muka_ e.8.1.4 (A:) Reovirus polymerase lambda3 {Reovirus [TaxId:
10891]}
Length = 1264
Score = 31.5 bits (71), Expect = 0.86
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 970 FTIMRTVIPSCNVVSTNVSSHSNNNNNTTTTTTTTTIFIPEH--SPMNGSFILSELQPQQ 1027
FT M T PS + +S + NN+T T T++ PEH P + ++ L Q+
Sbjct: 672 FTHMTTTFPS----GSTATSTEHTANNSTMMETFLTVWGPEHTDDP-DVLRLMKSLTIQR 726
Query: 1028 DYV 1030
+YV
Sbjct: 727 NYV 729
>d1ccva_ g.22.1.1 (A:) Chymotrypsin inhibitor AMCI {Honeybee (Apis
mellifera) [TaxId: 7460]}
Length = 56
Score = 27.9 bits (62), Expect = 0.88
Identities = 9/32 (28%), Positives = 10/32 (31%), Gaps = 3/32 (9%)
Query: 746 EYETNCAPLCH--CCDFDACDCEMTCPNNCTC 775
+ T C C C C M C C C
Sbjct: 8 VFNT-CGSACAPTCAQPKTRICTMQCRIGCQC 38
>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3
Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 29.3 bits (64), Expect = 1.8
Identities = 12/121 (9%), Positives = 23/121 (19%), Gaps = 5/121 (4%)
Query: 676 PSHKNIPDFYIGENPFQCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILL 735
P H+ G C Q L + N C
Sbjct: 1 PCHEVCKGRCWGPGSEDC----QTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQD 56
Query: 736 KEAHSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDN 795
+ + + + ++ ++ PN T Y +
Sbjct: 57 TDCFACRHFNDSGACVPRCPQPLVYNKLTFQL-EPNPHTKYQYGGVCVASCPHNFVVDQT 115
Query: 796 Q 796
Sbjct: 116 S 116
>d1n4na_ g.3.7.5 (A:) Floral defensin 1 {Garden petunia (Petunia x
hybrida), PHD1 [TaxId: 4102]}
Length = 47
Score = 26.6 bits (59), Expect = 2.0
Identities = 8/42 (19%), Positives = 12/42 (28%), Gaps = 3/42 (7%)
Query: 737 EAHSNQF--LCEYETNCAPLCHCCDFDACDCEMTCPNNCTCY 776
+A + +C + C C F C C C
Sbjct: 4 KAECPTWDSVCINKKPCVACCKKAKFSDGHCS-KILRRCLCT 44
>d1lc0a2 d.81.1.4 (A:129-246) Biliverdin reductase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 118
Score = 28.7 bits (64), Expect = 2.0
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 386 TFASLSNLHTLI-------MSNNKLKRIESNSLDSLTALSVLSLDNNELEYIEENA--LK 436
F+ +S L L+ + + L+ + + +T + + + L +IEE LK
Sbjct: 37 AFSGISRLTWLVSLFGELSLISATLEERKEDQYMKMTV-QLETQNKGLLSWIEEKGPGLK 95
Query: 437 NSTSLQDFHLNGNKLTEIPKVLRN 460
+ + +F L E+P V N
Sbjct: 96 RNRYV-NFQFTSGSLEEVPSVGVN 118
>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger
domain-containing protein 1 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 74
Score = 27.7 bits (61), Expect = 2.1
Identities = 10/64 (15%), Positives = 15/64 (23%), Gaps = 13/64 (20%)
Query: 745 CE-YETNCAPLCHCCDF----DACDCEMTCPNNCTCYHDVS-WEANVIDCSTGGYDNQLP 798
CE Y+ C CCD C H + ++ + C
Sbjct: 12 CEHYDRACLLKAPCCDKLYTCRLCHDTNE-------DHQLDRFKVKEVQCINCEKLQHAQ 64
Query: 799 PRIP 802
Sbjct: 65 QTCE 68
>d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 28.6 bits (62), Expect = 2.6
Identities = 9/105 (8%), Positives = 18/105 (17%), Gaps = 3/105 (2%)
Query: 692 QCDCNMQWLQSYSVNKERNKPNLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNC 751
QC + + C + + A Y
Sbjct: 32 QCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLML---YNPTT 88
Query: 752 APLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQ 796
+ + Y + V C Y+ +
Sbjct: 89 YQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEME 133
>d1k0ia2 d.16.1.2 (A:174-275) p-Hydroxybenzoate hydroxylase (PHBH)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 102
Score = 27.7 bits (62), Expect = 2.8
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 9/34 (26%)
Query: 1197 KSNTYLQ---------WGDKLFWEKLKFALPDVP 1221
+S Y+Q W D+ FW +LK LP
Sbjct: 45 RSQYYVQVPLSEKVEDWSDERFWTELKARLPSEV 78
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 29.3 bits (65), Expect = 3.2
Identities = 6/25 (24%), Positives = 9/25 (36%), Gaps = 1/25 (4%)
Query: 754 LCHCCDFDACDCEMTCPNNCTCYHD 778
L C C+ + C C Y +
Sbjct: 222 LKVECKEKPCEDDN-CKRKCNSYKE 245
>d1n8yc3 g.3.9.1 (C:166-322) Protooncoprotein Her2 extracellular
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 157
Score = 28.7 bits (62), Expect = 3.2
Identities = 8/58 (13%), Positives = 11/58 (18%), Gaps = 2/58 (3%)
Query: 739 HSNQFLCEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQ 796
S C+ C A + C H + C N
Sbjct: 35 TSGCARCKGRLPTD--CCHEQCAAGCTGPKHSDCLACLHFNHSGICELHCPALVTYNT 90
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 114
Score = 28.0 bits (61), Expect = 3.3
Identities = 10/66 (15%), Positives = 17/66 (25%)
Query: 745 CEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMD 804
C Y ++ C +D LPPRI D
Sbjct: 28 CAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKREYGPFCGKTLPPRIETD 87
Query: 805 ATELYL 810
+ ++ +
Sbjct: 88 SNKVTI 93
>d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 505
Score = 29.4 bits (63), Expect = 3.5
Identities = 5/55 (9%), Positives = 9/55 (16%), Gaps = 1/55 (1%)
Query: 745 CEYETNCAPLCHCCDFDACDCEMTCPNNCTCYHDVSWEANVIDCSTGGYDNQLPP 799
E + H + + C + PP
Sbjct: 399 IAKEYQPSEFPHRKIVKTL-IAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPP 452
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId:
5141]}
Length = 284
Score = 28.4 bits (62), Expect = 5.2
Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 4/98 (4%)
Query: 713 NLVDLDTVTCKLLYNRANPAILLKEAHSNQFLCEYETNCAPLCHCCDFDACDC-EMTCPN 771
N D + + + I+ K +CA C C C + P+
Sbjct: 8 NREDDAFLNPNFRFIDHS--IIGKNVPVADQSFRVGCSCASDEECMY-STCQCLDEMAPD 64
Query: 772 NCTCYHDVSWEANVIDCSTGGYDNQLPPRIPMDATELY 809
+ + + S G L R+ +Y
Sbjct: 65 SDEEADPYTRKKRFAYYSQGAKKGLLRDRVLQSQEPIY 102
>d1tvfa2 e.3.1.1 (A:15-315) Pencillin binding protein 4 (PbpD),
N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Length = 301
Score = 27.9 bits (61), Expect = 7.0
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 1170 RGKKRLIVILLGEVPQKDLDPDIRLYLKSNTYLQWG 1205
RGK R+ +++G K+L + + + N ++
Sbjct: 262 RGKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERS 297
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 27.7 bits (61), Expect = 8.1
Identities = 9/38 (23%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 741 NQFLCEYETNCAPLCHCCD--FDACDCEMTCPNNCTCY 776
+FL E + C CE C + C Y
Sbjct: 178 GEFLLERDNRAKLPKSKCKNNALYEACEKECIDPCMKY 215
>d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 155
Score = 27.3 bits (59), Expect = 8.3
Identities = 8/64 (12%), Positives = 14/64 (21%), Gaps = 6/64 (9%)
Query: 739 HSNQFLCEYETNCAP---LCHCCDFDACDCEMTCPNNCT-CYHDVSWEAN--VIDCSTGG 792
+ + D C N+ H N + +C +G
Sbjct: 77 LDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGY 136
Query: 793 YDNQ 796
N
Sbjct: 137 TMNS 140
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0671 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,564,053
Number of extensions: 216593
Number of successful extensions: 1634
Number of sequences better than 10.0: 1
Number of HSP's gapped: 980
Number of HSP's successfully gapped: 290
Length of query: 1269
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1173
Effective length of database: 1,089,516
Effective search space: 1278002268
Effective search space used: 1278002268
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.2 bits)