BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5673
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GVH4|GGNB2_CHICK Gametogenetin-binding protein 2 OS=Gallus gallus GN=GGNBP2 PE=2
SV=1
Length = 698
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 93/119 (78%)
Query: 1 MRAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIGNR 60
+RAY +L+ E D SKEKG+ ++LY G+R C ++HIH+ T+FIA L+ RAEPE G R
Sbjct: 224 LRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAGGR 283
Query: 61 RERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFEVS 119
RERHAKT++IAQEEVLTC+GI +YERLH+I KLR E+ T+Q+L + ++AL ++FE++
Sbjct: 284 RERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMA 342
>sp|Q5SV77|GGNB2_MOUSE Gametogenetin-binding protein 2 OS=Mus musculus GN=Ggnbp2 PE=1 SV=1
Length = 696
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 93/119 (78%)
Query: 1 MRAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIGNR 60
+RAY +L+ E D SKEKG+ ++LY G+R C ++HIH+ T+FIA L+ RAEPE G R
Sbjct: 224 LRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAGGR 283
Query: 61 RERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFEVS 119
RERHAKT++IAQEEVLTC+GI +YERLH+I KLR E+ T+Q+L + ++AL ++FE++
Sbjct: 284 RERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMT 342
>sp|Q9H3C7|GGNB2_HUMAN Gametogenetin-binding protein 2 OS=Homo sapiens GN=GGNBP2 PE=1 SV=1
Length = 697
Score = 136 bits (342), Expect = 4e-32, Method: Composition-based stats.
Identities = 66/119 (55%), Positives = 93/119 (78%)
Query: 1 MRAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIGNR 60
+RAY +L+ E D SKEKG+ ++LY G+R C ++HIH+ T+FIA L+ RAEPE G R
Sbjct: 224 LRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAGGR 283
Query: 61 RERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFEVS 119
RERHAKT++IAQEEVLTC+GI +YERLH+I KLR E+ T+Q+L + ++AL ++FE++
Sbjct: 284 RERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMT 342
>sp|Q6GVH5|GGNB2_RAT Gametogenetin-binding protein 2 OS=Rattus norvegicus GN=Ggnbp2 PE=2
SV=1
Length = 696
Score = 136 bits (342), Expect = 4e-32, Method: Composition-based stats.
Identities = 66/119 (55%), Positives = 93/119 (78%)
Query: 1 MRAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIGNR 60
+RAY +L+ E D SKEKG+ ++LY G+R C ++HIH+ T+FIA L+ RAEPE G R
Sbjct: 224 LRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAGGR 283
Query: 61 RERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFEVS 119
RERHAKT++IAQEEVLTC+GI +YERLH+I KLR E+ T+Q+L + ++AL ++FE++
Sbjct: 284 RERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMT 342
>sp|Q9VNG1|GGNB2_DROME Gametogenetin-binding protein 2-like OS=Drosophila melanogaster
GN=CG2182 PE=2 SV=3
Length = 671
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 90/121 (74%), Gaps = 5/121 (4%)
Query: 2 RAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLEL-RTEFIASLIARAEPELIGNR 60
RAY +L+ E SKEKG+ + LYA IR+C+ D+HIH+ + EF+ +LI RAEPE+ G+
Sbjct: 224 RAYKILIGEIS-SKEKGYAAQLYAHIRKCVPDQHIHVTTNKIEFLDALIKRAEPEVNGSY 282
Query: 61 ---RERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFE 117
RERHAKTLEIAQEEVLTC+G+ +YERL +I + LREE+ QVLA V + ALCR+F+
Sbjct: 283 SKLRERHAKTLEIAQEEVLTCVGMIMYERLRRIYVSLREEERACQVLAAVGVHALCRSFD 342
Query: 118 V 118
Sbjct: 343 T 343
>sp|Q63ZG9|GGNB2_XENLA Gametogenetin-binding protein 2 OS=Xenopus laevis GN=ggnbp2 PE=2
SV=1
Length = 664
Score = 122 bits (307), Expect = 5e-28, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 2 RAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIG--N 59
RA+ +L E D SK KG+ +++Y G+R C + HIHL T+FIA ++ RAEPE G
Sbjct: 228 RAFNILTGELDFSKVKGYCANVYQGLRCCPHEGHIHLCCETDFIAHVLGRAEPEFAGGYE 287
Query: 60 RRERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFEVS 119
RRERHAKT+++AQEEVLTC+GI +YERLH+I LKLR E T Q+L + ++AL ++FEV+
Sbjct: 288 RRERHAKTIDVAQEEVLTCLGIHLYERLHRIWLKLRAEVQTRQMLFYLGVDALRKSFEVT 347
>sp|Q6DFP9|GGNB2_XENTR Gametogenetin-binding protein 2 OS=Xenopus tropicalis GN=ggnbp2
PE=2 SV=1
Length = 669
Score = 122 bits (306), Expect = 6e-28, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 2 RAYTLLVEEKDPSKEKGFVSSLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIG--N 59
RA+ +L E D SK KG+ +++Y G+R C + HIHL T+FIA ++ RAEPE G
Sbjct: 228 RAFNILTGELDFSKVKGYCANVYQGLRCCPHEGHIHLCCETDFIAHVLGRAEPEFAGGYE 287
Query: 60 RRERHAKTLEIAQEEVLTCIGICVYERLHKIQLKLREEQCTYQVLATVAIEALCRNFEVS 119
RRERHAKT+++AQEEVLTC+GI +YERLH+I LKLR E T Q+L + ++AL ++FEV+
Sbjct: 288 RRERHAKTIDVAQEEVLTCLGIHLYERLHRIWLKLRAEVQTRQMLFYLGVDALRKSFEVT 347
>sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910
OS=Arabidopsis thaliana GN=At1g05910 PE=2 SV=1
Length = 1210
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 50 ARAEPELIGNRRERHAKTLEIAQEEVLTCIGIC 82
ARAE I R+ +H T E+ +E TC+G C
Sbjct: 558 ARAEILDIHTRKWKHPPTRELKEELAATCVGYC 590
>sp|P53848|FOL1_YEAST Folic acid synthesis protein FOL1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FOL1 PE=1 SV=2
Length = 824
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 14 SKEK--GFVSSLYAGIRRCLADKHIHLE------------LRTEFIASLIARAEPELIGN 59
SK+K G VS+L + + + DK+ +E +R++ I+ +I + GN
Sbjct: 85 SKKKNWGSVSNLAKSVSQFVMDKYSGVECLNLEVQADTTHIRSDHISCIIQQER----GN 140
Query: 60 RRERHAKTLEIAQEEVLTCIGICVYERLHK 89
+ + I++ ++LT IG+ +ERL K
Sbjct: 141 PESQEFDVVRISELKMLTLIGVFTFERLKK 170
>sp|B2HH13|MSHD_MYCMM Mycothiol acetyltransferase OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=mshD PE=3 SV=1
Length = 320
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 6 LLVEEKDPSKEK-GFVS-SLYAGIRRCLADKHIHLELRTEFIASLIARAEPELIGNRRER 63
LLVE++ P K G+++ S G +A+ +H + R IA+ + RA G R +
Sbjct: 50 LLVEDQSPGKSAIGYLNLSPAHGADAAMAELVVHPQARRRGIATAMVRAALAKTGGRNQF 109
Query: 64 HAKTLEIAQEEVLTCIGICVYERLHKIQLKLRE 96
A + + +G+ L +++ LR+
Sbjct: 110 WAHGTLAPAQATASALGLTPVRELVQMRRSLRQ 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,620,360
Number of Sequences: 539616
Number of extensions: 1413969
Number of successful extensions: 2784
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2772
Number of HSP's gapped (non-prelim): 11
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)