BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5679
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O83889|THIO_TREPA Thioredoxin OS=Treponema pallidum (strain Nichols) GN=trxA PE=3
SV=1
Length = 105
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 42 MAYLIIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTV-SETTSGVEFVKINVE 100
MA L I + ++TI V+ F+ P CG CK L P + V SE SGV K+NV+
Sbjct: 1 MALLDISS-GNVRKTIETNPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVD 59
Query: 101 NGGGEIAREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
+ ++A EF V ++PT+I F++G VD +G D+ I TL+ K
Sbjct: 60 DDQ-DLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQK 103
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 52 DFK-QTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIARE 109
DF+ + + PV+ F CG CK L P++ V G V K+++++ ++A E
Sbjct: 69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHT-DLALE 127
Query: 110 FEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKL 146
+EV AVPTV+ +NGD VD VG D+D ++ + KL
Sbjct: 128 YEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 164
>sp|P51225|THIO_PORPU Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1
Length = 107
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 53 FKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVSET-TSGVEFVKINVENGGGEIAREF 110
FKQ + + PVL F+ P CG C+ + P + ++E S ++ VKIN ++ IA E+
Sbjct: 11 FKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDNPT-IAAEY 69
Query: 111 EVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
++++PT++ F++G+ VDTV+G + +++ ++K
Sbjct: 70 GIRSIPTLMIFKSGERVDTVIGAVPKSTLESTLNK 104
>sp|P50254|THIO_PORYE Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1
Length = 107
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 53 FKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVSET-TSGVEFVKINVENGGGEIAREF 110
FKQ + N PVL F+ P CG C+ + P + ++E S ++ VKIN ++ IA E+
Sbjct: 11 FKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPT-IAAEY 69
Query: 111 EVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
++++PT++ F+ G+ VDTV+G + + + ++K
Sbjct: 70 GIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNK 104
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 52 DFK-QTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIARE 109
DF+ + + PV+ F CG CK L P++ + G V K+++++ ++A E
Sbjct: 69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT-DLAIE 127
Query: 110 FEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKL 146
+EV AVPTV+ +NGD VD VG D+D ++ + KL
Sbjct: 128 YEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKL 164
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 52 DFK-QTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIARE 109
DF+ + + PV+ F CG CK L P++ + G V K+++++ ++A E
Sbjct: 69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT-DLAIE 127
Query: 110 FEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKL 146
+EV AVPTV+ +NGD VD VG D+D ++ + KL
Sbjct: 128 YEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 164
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 52 DFK-QTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIARE 109
DF+ + + PV+ F CG CK L P++ + G V K+++++ ++A E
Sbjct: 69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT-DLAIE 127
Query: 110 FEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKL 146
+EV AVPTV+ +NGD VD VG D+D ++ + KL
Sbjct: 128 YEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKL 164
>sp|P54399|PDI_DROME Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2
SV=1
Length = 496
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 45 LIIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKIS----TVSETTSGVEFVKIN-- 98
+++ +D+FKQ I VL F+ P CG CK L P+ + ++E S ++ K++
Sbjct: 29 VLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDAT 88
Query: 99 VENGGGEIAREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
VE GE+A ++ V+ PT+ FR+G PV+ G D+I + K
Sbjct: 89 VE---GELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTKK 132
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 63 VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFR 122
VL F+ P CG CKQL P ++E E + I + ++ + PT+ FR
Sbjct: 388 VLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANELESIKISSFPTIKYFR 447
Query: 123 NGD 125
D
Sbjct: 448 KED 450
>sp|O17486|THIO_ECHGR Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2
Length = 107
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREF 110
D + I+G ++ FF CG CK L PK+ +++ V FVK++V+ ++A ++
Sbjct: 13 DALEAAIKGDKLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDE-CQDVAEKY 71
Query: 111 EVQAVPTVIGFRNGDPVDTVVG 132
V A+PT+I F+NG + VVG
Sbjct: 72 RVTAMPTLIVFKNGCEIGHVVG 93
>sp|P50338|THIO_GRIPA Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2
Length = 109
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 54 KQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVS-ETTSGVEFVKINVENGGGEIAREFEV 112
++ I R PVL F+ P CG C+ + I ++ + ++ VK+N + IA E+ +
Sbjct: 13 EEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNP-TIATEYGI 71
Query: 113 QAVPTVIGFRNGDPVDTVVG 132
+++PTV+ F NG VDTVVG
Sbjct: 72 RSIPTVMIFINGKKVDTVVG 91
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 57 IRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAV 115
++ PV F+ P CG CK ++P ++ +++ +G +F K+N + ++ V+++
Sbjct: 89 LKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPG-QYGVRSI 147
Query: 116 PTVIGFRNGDPVDTVVGNADQDVIQTLVSKL 146
PT++ F NG+ DT++G +D + T ++K
Sbjct: 148 PTIMIFVNGEKKDTIIGAVSKDTLATSINKF 178
>sp|O94504|TRX2_SCHPO Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=trx2 PE=1 SV=2
Length = 133
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 47 IEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEI 106
+E D+ I + F+ CG CK L+P + +SE F+ +N + +I
Sbjct: 34 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADK-FSDI 92
Query: 107 AREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKLSQ 148
A++ V A+PT++ FR G +D +VG AD + +L++K +
Sbjct: 93 AQKNGVYALPTMVLFRKGQELDRIVG-ADVKTLSSLLAKYQE 133
>sp|Q17770|PDI2_CAEEL Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2
PE=1 SV=1
Length = 493
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 45 LIIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKI----STVSETTSGVEFVKINVE 100
+I+ D+F + I G +L F+ P CG CK L P+ + + E S ++ K++
Sbjct: 25 VIVLTKDNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDA- 83
Query: 101 NGGGEIAREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
GE++ +FEV+ PT+ FRNG P + G D D I + K
Sbjct: 84 TVHGEVSSKFEVRGYPTLKLFRNGKPQE-YNGGRDHDSIIAWLKK 127
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 52 DFKQTIRGRNP-VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREF 110
+F+Q R VL F+ P CG CKQL P + E + E + I + +
Sbjct: 372 NFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDV 431
Query: 111 EVQAVPTVIGFRNG 124
++Q+ PT+ F G
Sbjct: 432 KIQSFPTIKFFPAG 445
>sp|Q9ZP20|TRXM5_ORYSJ Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRXM PE=2 SV=1
Length = 172
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PVL F+ P CG C+ + P I +++ G ++ K+N ++ IA + ++++PTV+
Sbjct: 85 PVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSP-NIATNYGIRSIPTVLM 143
Query: 121 FRNGDPVDTVVGNADQDVIQTLVSK 145
F+NG+ ++V+G + + T++ K
Sbjct: 144 FKNGEKKESVIGAVPKTTLATIIDK 168
>sp|P80579|THIO_ALIAC Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1
Length = 105
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 52 DFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREF 110
+F+Q I+G PVL F+ CG C+ + P + +E + V K+NV+ E +F
Sbjct: 9 NFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE-NPETTSQF 67
Query: 111 EVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKLSQ 148
+ ++PT+I F+ G PV ++G ++ ++ ++ + Q
Sbjct: 68 GIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
>sp|Q17424|THIO2_CAEEL Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=3 SV=2
Length = 145
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 47 IEKIDDF-KQTIRGRNPVLAYFFKPSCGFCKQLEPKIS-TVSETTSGVEFVKINVENGGG 104
I+ ++DF ++ I+ PV+ F CG C+ L P++ V+ V KINV++ G
Sbjct: 42 IDSVEDFTEKVIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVDHAG- 100
Query: 105 EIAREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLV 143
E+A ++ + AVPTV F+NG+ + G D + + +
Sbjct: 101 ELAMDYGISAVPTVFAFKNGEKISGFSGVLDDEQLDDFI 139
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 54 KQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEV 112
K+ + PVL F+ CG CK L P I +S+ G V+ +K+N++ I E+ +
Sbjct: 12 KEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPN-IPSEYGI 70
Query: 113 QAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
+++PT++ F+NG+ DT +G ++ + ++K
Sbjct: 71 RSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA
PE=3 SV=2
Length = 107
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 53 FKQ-TIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREF 110
FKQ + PVL F+ P CG C+ + P + +++ S V+ VK+N + +A ++
Sbjct: 12 FKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPS-VASQY 70
Query: 111 EVQAVPTVIGFRNGDPVDTVVG 132
++++PT++ F++G VDTVVG
Sbjct: 71 GIRSIPTLMIFKDGQRVDTVVG 92
>sp|P52227|THIO_CHLCV Thioredoxin OS=Chlamydophila caviae (strain GPIC) GN=trxA PE=3 SV=1
Length = 102
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 63 VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFR 122
VL FF CG CK L P + ++ S V K+N+++ A ++ V ++PT+I F+
Sbjct: 19 VLIDFFAEWCGPCKMLTPVLESLEAEVSSVLIGKVNIDDHPAP-AEQYGVSSIPTLILFK 77
Query: 123 NGDPVDTVVGNADQDVIQTLVSKLS 147
+G VD VVG D+D + L+++ S
Sbjct: 78 DGKEVDRVVGLKDKDSLIRLINQHS 102
>sp|Q38879|TRXH2_ARATH Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Length = 133
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 57 IRGRNPVLAYFFKPS-CGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAV 115
I+ N +L F S CG C+ +EP I +++ + V+FVK++V+ ++A+EF V A+
Sbjct: 43 IKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDE-LPDVAKEFNVTAM 101
Query: 116 PTVIGFRNGDPVDTVVGNADQDVIQTLVSKL 146
PT + + G ++ ++G A +D ++ VSKL
Sbjct: 102 PTFVLVKRGKEIERIIG-AKKDELEKKVSKL 131
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 49 KIDDF---KQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVS-ETTSGVEFVKINVENGGG 104
++ DF K+ + VL F+ P CG C+ + P I ++ E V+ VKIN +
Sbjct: 6 QVTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPS 65
Query: 105 EIAREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
I+ E+ ++++PT++ F++G VDTV+G + + + K
Sbjct: 66 -ISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKK 105
>sp|P0A4L1|THIO1_NOSS1 Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA
PE=3 SV=2
Length = 107
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 53 FKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREF 110
FKQ + + PVL F+ P CG C+ + P + +++ G ++ VK+N + ++A ++
Sbjct: 12 FKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENP-QVASQY 70
Query: 111 EVQAVPTVIGFRNGDPVDTVVG 132
++++PT++ F+ G VD VVG
Sbjct: 71 GIRSIPTLMIFKGGQKVDMVVG 92
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2
Length = 107
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 53 FKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREF 110
FKQ + + PVL F+ P CG C+ + P + +++ G ++ VK+N + ++A ++
Sbjct: 12 FKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENP-QVASQY 70
Query: 111 EVQAVPTVIGFRNGDPVDTVVG 132
++++PT++ F+ G VD VVG
Sbjct: 71 GIRSIPTLMIFKGGQKVDMVVG 92
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 53 FKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTV-SETTSGVEFVKINVENGGGEIAREFE 111
F + PVL F+ CG CK + P + + SE + + K++V+ E+AREF+
Sbjct: 360 FADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNP-EMAREFQ 418
Query: 112 VQAVPTVIGFRNGDPVDTVVG 132
V ++PT+I F+ G PV +VG
Sbjct: 419 VVSIPTMILFQGGQPVKRIVG 439
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PV+ F+ P CG CK + P I +++ SG + K+N + G IA ++ ++++PTV+
Sbjct: 94 PVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG-IATQYNIRSIPTVLF 152
Query: 121 FRNGDPVDTVVGNADQDVIQTLVSK 145
F+NG+ ++++G + + + K
Sbjct: 153 FKNGERKESIIGAVPKSTLTDSIEK 177
>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX1 PE=1 SV=3
Length = 103
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 52 DFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFE 111
+F I V+ F+ CG CK + P I SE +F K++V+ G ++A++ E
Sbjct: 10 EFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELG-DVAQKNE 68
Query: 112 VQAVPTVIGFRNGDPVDTVVG 132
V A+PT++ F+NG V VVG
Sbjct: 69 VSAMPTLLLFKNGKEVAKVVG 89
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 57 IRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAV 115
++ PV+ F+ P CG CK ++P ++ +++ +G ++F K+N ++ + + V+++
Sbjct: 86 LKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGK-YGVRSI 144
Query: 116 PTVIGFRNGDPVDTVVGNADQDVIQTLVSKLSQ 148
PT++ F G+ DT++G + + T + K Q
Sbjct: 145 PTIMIFVKGEKKDTIIGAVPKTTLATSIDKFLQ 177
>sp|O14463|TRX1_SCHPO Thioredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=trx1 PE=3 SV=3
Length = 103
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 52 DFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFE 111
+FK + V+ FF CG CK + PK S T S F+K++V+ EIA E
Sbjct: 10 EFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQ-LSEIAAEAG 68
Query: 112 VQAVPTVIGFRNGDPVDTVVG 132
V A+P+ ++NG+ ++ +VG
Sbjct: 69 VHAMPSFFLYKNGEKIEEIVG 89
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 51 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREF 110
D+F +I VL FF CG CK L P + ++ V +K+++ + A +F
Sbjct: 8 DNFADSI-ASGLVLVDFFAEWCGPCKMLTPVLEALAAELPYVTILKLDI-DASPRPAEQF 65
Query: 111 EVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
V ++PT+I F++G V+ VG D+D + L+SK
Sbjct: 66 GVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISK 100
>sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1
Length = 167
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 NPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVI 119
PVL F+ P CG C+ + P I +++ +G + K+N ++ +A + ++++PTV+
Sbjct: 78 TPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSP-NVASTYGIRSIPTVL 136
Query: 120 GFRNGDPVDTVVGNADQDVIQTLVSK 145
F+ G+ ++V+G + + TL+ K
Sbjct: 137 IFKGGEKKESVIGAVPKSTLTTLIDK 162
>sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 175
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 57 IRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAV 115
I +PVL F+ P CG C+ + P I +++ G ++ K+N ++ IA + ++++
Sbjct: 83 IACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPN-IASTYGIRSI 141
Query: 116 PTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
PTV+ F++G+ ++V+G + + T++ K
Sbjct: 142 PTVLMFKDGEKKESVIGAVPKTTLCTIIDK 171
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 54 KQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEV 112
K+ + PVL F+ CG CK L P I +S+ G V+ +K+N++ E+ +
Sbjct: 12 KEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPN-TPSEYGI 70
Query: 113 QAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
+++PT++ F+NG+ DT +G ++ + ++K
Sbjct: 71 RSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 63 VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFR 122
VL FF CG C+ L P + ++ V KIN++ A +EV ++PT+I F+
Sbjct: 19 VLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINIDENSKP-AETYEVSSIPTLILFK 77
Query: 123 NGDPVDTVVGNADQDVIQTLVSK 145
+G+ V VVG D++ + L++K
Sbjct: 78 DGNEVARVVGLKDKEFLTNLINK 100
>sp|P0AGG7|THIO2_SHIFL Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1
Length = 139
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PV+ F+ P CG C+ P V++ SG V FVK+N E E++ F ++++PT++
Sbjct: 54 PVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTE-AERELSSRFGIRSIPTIMI 112
Query: 121 FRNGDPVDTVVG 132
F+NG VD + G
Sbjct: 113 FKNGQVVDMLNG 124
>sp|P0AGG4|THIO2_ECOLI Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1
Length = 139
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PV+ F+ P CG C+ P V++ SG V FVK+N E E++ F ++++PT++
Sbjct: 54 PVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTE-AERELSSRFGIRSIPTIMI 112
Query: 121 FRNGDPVDTVVG 132
F+NG VD + G
Sbjct: 113 FKNGQVVDMLNG 124
>sp|P0AGG5|THIO2_ECOL6 Thioredoxin-2 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=trxC PE=3 SV=1
Length = 139
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PV+ F+ P CG C+ P V++ SG V FVK+N E E++ F ++++PT++
Sbjct: 54 PVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTE-AERELSSRFGIRSIPTIMI 112
Query: 121 FRNGDPVDTVVG 132
F+NG VD + G
Sbjct: 113 FKNGQVVDMLNG 124
>sp|P0AGG6|THIO2_ECO57 Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC PE=3 SV=1
Length = 139
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PV+ F+ P CG C+ P V++ SG V FVK+N E E++ F ++++PT++
Sbjct: 54 PVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTE-AERELSSRFGIRSIPTIMI 112
Query: 121 FRNGDPVDTVVG 132
F+NG VD + G
Sbjct: 113 FKNGQVVDMLNG 124
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 63 VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFR 122
VL FF CG CK L P + ++ V +K+++++ A ++ V ++PT+I F+
Sbjct: 19 VLIDFFAEWCGPCKMLTPVLEALAAELPHVTILKVDIDSSPRP-AEQYSVSSIPTLILFK 77
Query: 123 NGDPVDTVVGNADQDVIQTLVSK 145
+G V+ VG D+D + L+SK
Sbjct: 78 DGKEVERSVGLKDKDSLIKLISK 100
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PVL F+ P CG C+ + P + +++ +G +F KIN + A + +++VPTVI
Sbjct: 106 PVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPN-TANRYGIRSVPTVII 164
Query: 121 FRNGDPVDTVVGNADQDVIQTLVSKL 146
F+ G+ D+++G ++ ++ + +
Sbjct: 165 FKGGEKKDSIIGAVPRETLEKTIERF 190
>sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2
Length = 116
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 57 IRGRNPVLAYFFKPSCGFCKQLEPKISTV-SETTSGVEFVKINVENGGGEIAREFEVQAV 115
+ PVL F+ CG CK + P + + +E + + K++V+ E AR F+V ++
Sbjct: 22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP-ETARNFQVVSI 80
Query: 116 PTVIGFRNGDPVDTVVG 132
PT+I F++G PV +VG
Sbjct: 81 PTLILFKDGQPVKRIVG 97
>sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=trxA PE=3 SV=2
Length = 116
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 57 IRGRNPVLAYFFKPSCGFCKQLEPKISTV-SETTSGVEFVKINVENGGGEIAREFEVQAV 115
+ PVL F+ CG CK + P + + +E + + K++V+ E AR F+V ++
Sbjct: 22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP-ETARNFQVVSI 80
Query: 116 PTVIGFRNGDPVDTVVG 132
PT+I F++G PV +VG
Sbjct: 81 PTLILFKDGQPVKRIVG 97
>sp|Q17967|PDI1_CAEEL Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1
PE=3 SV=1
Length = 485
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 52 DFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVS----ETTSGVEFVKIN-VENGGGEI 106
+F++TI G VL F+ P C CK L PK + E S ++ K++ EN +
Sbjct: 32 NFEETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQA--L 89
Query: 107 AREFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSK 145
A +FEV+ PT++ F++G P G A ++ + K
Sbjct: 90 ASKFEVRGYPTILYFKSGKPTKYTGGRATAQIVDWVKKK 128
>sp|Q09433|THIO1_CAEEL Thioredoxin-1 OS=Caenorhabditis elegans GN=trx-1 PE=2 SV=1
Length = 115
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 52 DFKQTIRGRNP---VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAR 108
DF+Q IR ++P ++ F+ CG CK + P ++ T G+ F K++V+ ++
Sbjct: 17 DFEQLIR-QHPEKIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDE-AEDLCS 74
Query: 109 EFEVQAVPTVIGFRNGDPVDTVVGNADQDVIQTLVSKLS 147
+++V+ +PT I +NGD ++ + G + ++ Q ++ +S
Sbjct: 75 KYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVLEHVS 113
>sp|Q05739|THIO_STRC2 Thioredoxin OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM
738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 /
VKM Ac-602) GN=trxA PE=1 SV=1
Length = 107
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 51 DDFK-QTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIARE 109
D F+ ++ PVL F+ CG C+Q+ P + ++E +E VK+N++ A+
Sbjct: 11 DTFEADVLKSEKPVLVDFWAEWCGPCRQIAPSLEAITEHGGQIEIVKLNIDQNPATAAK- 69
Query: 110 FEVQAVPTVIGFRNGDPVDTVVG 132
+ V ++PT+ ++ G+ V T+VG
Sbjct: 70 YGVMSIPTLNVYQGGEVVKTIVG 92
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 51 DDFKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVS-ETTSGVEFVKINVE-NGGGEIA 107
D F + G + PVL F+ CG CK + P + ++ E + KI+V+ + A
Sbjct: 13 DSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPATA 72
Query: 108 REFEVQAVPTVIGFRNGDPVDTVVG 132
R+F+V ++PT+I F++G PV +VG
Sbjct: 73 RDFQVVSIPTMILFKDGAPVKRIVG 97
>sp|P14949|THIO_BACSU Thioredoxin OS=Bacillus subtilis (strain 168) GN=trxA PE=1 SV=3
Length = 104
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 63 VLAYFFKPSCGFCKQLEPKISTVS-ETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGF 121
VLA F+ P CG CK + P + + E ++ VKI+V+ E A ++ V ++PT++
Sbjct: 20 VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQ-ETAGKYGVMSIPTLLVL 78
Query: 122 RNGDPVDTVVGNADQDVIQTLVSK 145
++G+ V+T VG ++ +Q LV+K
Sbjct: 79 KDGEVVETSVGFKPKEALQELVNK 102
>sp|Q9R6P9|THIO_MYCGA Thioredoxin OS=Mycoplasma gallisepticum (strain R(low / passage 15
/ clone 2)) GN=trxA PE=3 SV=2
Length = 100
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 52 DFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFE 111
+ Q + V+ F+ CG CK L P V++ FVK++V+ EI+ E+E
Sbjct: 9 ELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKDWTFVKVDVDQAN-EISSEYE 67
Query: 112 VQAVPTVIGFRNGDPVDTVVG 132
++++PTVI F++G D +G
Sbjct: 68 IRSIPTVIFFQDGKMADKRIG 88
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PVL F+ CG CK ++P I +S+ G + K+N + +IA +F ++++PT++
Sbjct: 86 PVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENP-DIATQFGIRSIPTMMI 144
Query: 121 FRNGDPVDTVVGNADQDVIQTLVSKLSQ 148
F+NG+ D V+G + TLVS + +
Sbjct: 145 FKNGEKKDAVIGAVPES---TLVSSIDK 169
>sp|P52231|THIO_SYNY3 Thioredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=trxA
PE=1 SV=3
Length = 107
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIAREFEVQAVPTVIG 120
PVL F+ P CG C+ + P + +S+ G V+ VK+N + A ++ ++++PT++
Sbjct: 22 PVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPN-TASQYGIRSIPTLMI 80
Query: 121 FRNGDPVDTVVGNADQDVIQTLVSK 145
F+ G VD VVG + + + + K
Sbjct: 81 FKGGQRVDMVVGAVPKTTLASTLEK 105
>sp|P77395|YBBN_ECOLI Uncharacterized protein YbbN OS=Escherichia coli (strain K12)
GN=ybbN PE=1 SV=2
Length = 284
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 62 PVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGE-IAREFEVQAVPTVIG 120
PVL YF+ C QL P + +++ +G +F+ ++ + IA +F ++A+PTV
Sbjct: 25 PVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTVYL 83
Query: 121 FRNGDPVDTVVGNADQDVIQTLVSK 145
F+NG PVD G ++ I+ L+ K
Sbjct: 84 FQNGQPVDGFQGPQPEEAIRALLDK 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,599,218
Number of Sequences: 539616
Number of extensions: 2068671
Number of successful extensions: 4977
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 4517
Number of HSP's gapped (non-prelim): 445
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)