RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5680
(201 letters)
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 67.0 bits (163), Expect = 2e-14
Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 5/110 (4%)
Query: 61 IEKIDDFKQTI---RGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGG 117
+E + F +TI + ++ ++ C L + ++ V+F KI N
Sbjct: 104 LETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRASNT- 162
Query: 118 GEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKLATH 167
F +PT++ ++ G+ + + A+Q + + L +
Sbjct: 163 -GAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 60.2 bits (145), Expect = 6e-13
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGGGEIARE 123
+F+Q I+G PVL F+ CG C+ + P + +E + V K+NV+ E +
Sbjct: 8 ANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP-ETTSQ 66
Query: 124 FEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQ 162
F + ++PT+I F+ G+PV ++G ++ ++ ++ + Q
Sbjct: 67 FGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 54.4 bits (130), Expect = 1e-10
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 56 MAYLIIEKIDDFKQTIR--GRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINV 113
+ + DF+ + G + F CG C ++ P S++S F++++V
Sbjct: 1 VGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDV 60
Query: 114 ENGGGEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSK 159
A + A PT FRN +D G AD ++ + +
Sbjct: 61 HQCQ-GTAATNNISATPTFQFFRNKVRIDQYQG-ADAVGLEEKIKQ 104
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 54.0 bits (129), Expect = 2e-10
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 65 DDFKQTIR--GRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAR 122
D F ++ G PV+ F CG CK + PK ++E V F+K++ +A+
Sbjct: 14 DTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAK 73
Query: 123 EFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLS 161
E ++ VPT + V V G +++ + + S
Sbjct: 74 ELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 112
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 53.2 bits (127), Expect = 3e-10
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 61 IEKIDDFKQTIR--GRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGG 118
IE F++ + G V+ F CG CK ++P ++SE S V F++++V++
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQ- 63
Query: 119 EIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
++A E EV+ +PT F+ G V G A+++ ++ +++L
Sbjct: 64 DVASECEVKCMPTFQFFKKGQKVGEFSG-ANKEKLEATINEL 104
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 51.0 bits (121), Expect = 2e-09
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 60 IIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGE 119
I+ +F I V+ FF CG CK++ P S+T + + F+K++V+ E
Sbjct: 4 IVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVS-E 62
Query: 120 IAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLS 161
+ + + ++PT ++NG VD ++G A+ ++ L+ K +
Sbjct: 63 VTEKENITSMPTFKVYKNGSSVDTLLG-ANDSALKQLIEKYA 103
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 50.2 bits (119), Expect = 3e-09
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 65 DDFKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIARE 123
+F+ + PVL YF+ CG C+ + P I+ + T S V + ++
Sbjct: 10 AEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKK 69
Query: 124 FEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
++V+ VP + + +D G +D + + +
Sbjct: 70 YKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTH 106
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 49.4 bits (117), Expect = 9e-09
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREF 124
+ F++ + ++ F C CK + P + +++ V F+K++V+ E+
Sbjct: 17 EHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVA-EEW 75
Query: 125 EVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLS 161
V+A+PT I ++G VD VG AD+D + TLV+K +
Sbjct: 76 NVEAMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 49.3 bits (117), Expect = 1e-08
Identities = 12/108 (11%), Positives = 34/108 (31%), Gaps = 8/108 (7%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKI--STVSETTSGVEFVKINVENGGGEIAR 122
F++T+ + F S K + + T + + V++ G +
Sbjct: 10 LSFEKTVERFPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENK 69
Query: 123 E------FEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKL 164
+ + P++ F+ + + + + L + +S
Sbjct: 70 ALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANT 117
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 48.7 bits (115), Expect = 1e-08
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 56 MAYLIIEKIDDFKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTV-SETTSGVEFVKINV 113
M + D FK + + PVL F+ P CG C+ + P + + E ++ VK+N
Sbjct: 1 MEAGAVND-DTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNT 59
Query: 114 ENGGGEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
+ +A E+ ++++PT++ F+ G + ++G + I V K
Sbjct: 60 DE-SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKY 105
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 47.5 bits (112), Expect = 4e-08
Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 65 DDFKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVS-ETTSGVEFVKINVENGGGEIAR 122
D F + + +L F+ CG CK + P + ++ E + K+N++ A
Sbjct: 10 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP-GTAP 68
Query: 123 EFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
++ ++ +PT++ F+NG+ VG + ++ +
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 106
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 46.8 bits (110), Expect = 7e-08
Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 51 IQAIQMAYLIIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVK 110
++A + + + ++ F+ + +A+F CG CK +
Sbjct: 3 MRARYPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKT-IERPMEKIAYEFPTVKFA 61
Query: 111 INVENGGGEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
+ EI + V +PT I R+G + V+G A+ +++ + +
Sbjct: 62 KVDADNNSEIVSKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDI 110
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 46.7 bits (110), Expect = 8e-08
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREF 124
+ P++ F CG CK + P T+S +G + +A
Sbjct: 15 AQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAA 74
Query: 125 EVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLS 161
+ A+PT +++G D +VG A QD ++ LV+K +
Sbjct: 75 GITAMPTFHVYKDGVKADDLVG-ASQDKLKALVAKHA 110
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 46.4 bits (109), Expect = 1e-07
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQ----LEPKISTVSETTSGVEFVKINVENGGGEI 120
+F + + +L F+ P CG CK + S + K++
Sbjct: 15 SNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLA 74
Query: 121 AREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKL 164
+ + V+ PT+ FRNGD A ++ +V+ L ++
Sbjct: 75 QQ-YGVRGYPTIKFFRNGDTASPKEYTAGREA-DDIVNWLKKRT 116
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 46.1 bits (108), Expect = 2e-07
Identities = 11/107 (10%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 56 MAYLIIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVEN 115
+ L + + ++ + + + + +C +C++ +S V T + + E
Sbjct: 8 IKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEP 67
Query: 116 GGGEIARE----FEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVS 158
+ + + VP + +G + I+
Sbjct: 68 SQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG 114
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 45.0 bits (106), Expect = 4e-07
Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 4/105 (3%)
Query: 61 IEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVE--FVKINVENGGG 118
++DD+ VL I + ++E
Sbjct: 24 ESRLDDWLTQAPDG-VVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQ-SE 81
Query: 119 EIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQK 163
I F V P + F G+ ++ G + L+ L +
Sbjct: 82 AIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEP 126
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 43.0 bits (100), Expect = 2e-06
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 65 DDFKQTIR--GRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAR 122
D+ KQ IR ++ + F P+C +C + + KI +
Sbjct: 4 DETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP 63
Query: 123 EF----EVQAVPTVIGFRNGDPVDMVVGNAD-QDVIQTLVSKLS 161
E+ V AVP ++ NG+ G + ++ L+S LS
Sbjct: 64 EWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSALS 107
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 42.9 bits (100), Expect = 2e-06
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREF 124
+ ++ + V+ F CG C+ + P + +++ V F+K++ + +A ++
Sbjct: 19 EQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELK-SVASDW 77
Query: 125 EVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSK 159
+QA+PT + + G +D VVG A +D +Q+ ++K
Sbjct: 78 AIQAMPTFMFLKEGKILDKVVG-AKKDELQSTIAK 111
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 42.8 bits (100), Expect = 3e-06
Identities = 12/97 (12%), Positives = 33/97 (34%), Gaps = 2/97 (2%)
Query: 65 DDFKQTIRGRN--PVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAR 122
Q I V+ F C +++ + +++E + + + +
Sbjct: 11 WQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNK 70
Query: 123 EFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSK 159
+E+ TV+ F + + +G + + I +
Sbjct: 71 MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMED 107
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 41.8 bits (97), Expect = 4e-06
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 65 DDFKQTI-RGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIARE 123
+K+ + PV+ F+ P CG CK + P I +++ SG V + IA +
Sbjct: 7 SSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQ 66
Query: 124 FEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
+ ++++PTV+ F+NG+ + ++G + + + K
Sbjct: 67 YNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 103
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 40.5 bits (94), Expect = 8e-06
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 80 YFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFRNGD 139
F P+C +C + + V+ E A E+ + AVP +
Sbjct: 7 VFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAINGVV- 65
Query: 140 PVDMVVGNADQDVIQTLVSKL 160
VG ++ + ++
Sbjct: 66 ---RFVGAPSREELFEAINDE 83
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 40.6 bits (94), Expect = 1e-05
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 65 DDFKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINV--ENGGGEIA 121
++ + + VL F+ P CG CK L PK + + EF V +
Sbjct: 10 KNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND 69
Query: 122 REFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQ 162
E+Q PT+ + G V + + V + L+ +++
Sbjct: 70 VPDEIQGFPTIKLYPAGAKGQPVTYSGSRTV-EDLIKFIAE 109
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 40.2 bits (93), Expect = 3e-05
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 65 DDFKQTIRGRN-PVLAYFFKPSCGFCKQLEPKISTVS-ETTSGVEFVKINVENGGGEIAR 122
+ + + VL ++ P CG CK+L P ++ + V I + R
Sbjct: 20 KNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR 79
Query: 123 EFEVQAVPTVIGFRNGDPVDMVVGNADQDV 152
++ PT++ + G + VV + +
Sbjct: 80 GVVIEGYPTIVLYPGGKKSESVVYQGSRSL 109
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 39.8 bits (92), Expect = 3e-05
Identities = 10/106 (9%), Positives = 35/106 (33%), Gaps = 10/106 (9%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCG------FCKQLEPKISTVSE--TTSGVEFVKINVENG 116
++K + + + +P + E + ++ GV F ++ E
Sbjct: 19 KNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD 78
Query: 117 GGEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQ 162
++ + ++ F+ + ++ G D + + + +
Sbjct: 79 AAVA-KKLGLTEEDSIYVFKEDEVIEY-DGEFSADTLVEFLLDVLE 122
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 39.5 bits (91), Expect = 3e-05
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEF-VKINVENGGGEIARE 123
D F + I+ + VLA FF P CG CK + P+ +ET + ++ E
Sbjct: 18 DSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCME 77
Query: 124 FEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKL 164
+ P++ F+N D + + + + +V + ++
Sbjct: 78 HNIPGFPSLKIFKNSDVNNSIDYEGPRTA-EAIVQFMIKQS 117
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 38.8 bits (89), Expect = 4e-05
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 77 VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFR 136
+ F P C C + + V+ V+ + A E+ + AVPT++
Sbjct: 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVING 64
Query: 137 NGDPVDMVVGNADQDVIQTLVSK 159
+ + +G ++ + + K
Sbjct: 65 DVE----FIGAPTKEALVEAIKK 83
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 37.7 bits (87), Expect = 1e-04
Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 8/106 (7%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQ-----LEPKISTVSETTSG-VEFVKINV-ENGG 117
F + I VL F KQ L ++ + V N
Sbjct: 12 VTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNME 71
Query: 118 GEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQK 163
+ + ++ P FR+GD + V + V + L +
Sbjct: 72 LSEKYKLDKESYPVFYLFRDGDFENPVPYSGAVKV-GAIQRWLKGQ 116
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 37.0 bits (85), Expect = 2e-04
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 76 PVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGF 135
PVL F K C C + + + + ++ V I + ++ +
Sbjct: 17 PVLTLFTKAPCPLCDEAKEVLQPYKD-RFILQEVDITLPE-NSTWYERYKFD---IPVFH 71
Query: 136 RNGDPVDMVVGNADQDVIQTLVSKLSQ 162
NG + M + ++ + KLS
Sbjct: 72 LNGQFLMM--HRVNTSKLEKQLRKLSG 96
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 37.6 bits (86), Expect = 2e-04
Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 28/122 (22%)
Query: 67 FKQTIRGRNPVLAYFFKPSCGFCKQ-LEPKISTVSETTSGVEFVKINVENGG-------- 117
++ + G P L +F+ SC CK+ + + + V +++
Sbjct: 22 TREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKI 81
Query: 118 ------------------GEIAREFEVQAVPTVIGF-RNGDPVDMVVGNADQDVIQTLVS 158
+ FE + VP F + G G + +++ V+
Sbjct: 82 KETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVN 141
Query: 159 KL 160
++
Sbjct: 142 RV 143
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 36.4 bits (83), Expect = 5e-04
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 61 IEKIDDFKQTIR--GRNPVLAYFFKPSCGFCKQLEPKISTVSETTSG-VEFVKINVENGG 117
++ D + V+ FF CG CK + PK+ +S + V +K++V+
Sbjct: 10 VKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE 69
Query: 118 GEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSK 159
+IA E+ + ++PT + +NG V+ G A+ ++ ++
Sbjct: 70 -DIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIKA 109
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 35.5 bits (81), Expect = 7e-04
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 13/101 (12%)
Query: 60 IIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGE 119
++E+I D ++ SC C + ++ ++ ++ I+
Sbjct: 6 LLEQIRDIDGDF-----EFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGT-FQN 59
Query: 120 IAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKL 160
E V VP V F NG + +V+K+
Sbjct: 60 EITERNVMGVPAV--FVNGKEFGQGRMTLTE-----IVAKV 93
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 33.3 bits (75), Expect = 0.007
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 31/123 (25%)
Query: 72 RGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKI-------------------- 111
+ + P L F+ C C + ++ I
Sbjct: 22 KDK-PTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKKDGDFQKWY 80
Query: 112 ---------NVENGGGEIAREFEVQAVPTVIGF-RNGDPVDMVVGNADQDVIQTLVSKLS 161
V + GG IA+ + P+ ++GD +V G+ ++ L+ +
Sbjct: 81 AGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRDPN 140
Query: 162 QKL 164
L
Sbjct: 141 ADL 143
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 33.1 bits (74), Expect = 0.008
Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 28/132 (21%)
Query: 61 IEKIDDFKQTI------RGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKIN-- 112
+E +D+ Q +G+ PVL + C + ++ +S V +
Sbjct: 2 LESLDNPGQFYQADVLTQGK-PVLLNVWATWCPTSRAEHQYLNQLSAQGIRVVGMNYKDD 60
Query: 113 ------------------VENGGGEIAREFEVQAVP-TVIGFRNGDPVDMVVGNADQDVI 153
+ +G G + + V P T + NG G+ + V
Sbjct: 61 RQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVW 120
Query: 154 QTLVSKLSQKLA 165
+ + L +K +
Sbjct: 121 EEEIKPLWEKYS 132
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 32.9 bits (74), Expect = 0.009
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 65 DDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKI---STVSETTSGVEFVKINVENGGGEIA 121
D K+ P++ K CG CK L+PK + +SE + V + E +
Sbjct: 16 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDED 75
Query: 122 REFEVQAVPTVIGFR-NGDPVDMVVG 146
+ +P ++ +G ++
Sbjct: 76 FSPDGGYIPRILFLDPSGKVHPEIIN 101
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 32.2 bits (72), Expect = 0.027
Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 76 PVLAYFFKPSCGFCKQLEPKISTVSE----TTSGVEFVKINVENGGGEIAREFEVQAVPT 131
P + FF C C Q E + GV+ K +V GG++ ++ QA
Sbjct: 20 PQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDL-TQAWAV 78
Query: 132 VIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKLATHYQVD 171
+ D V + + Q + + + + +
Sbjct: 79 AMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIK 118
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 31.7 bits (71), Expect = 0.030
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 59 LIIEKIDDFKQ---TIRGRNP--VLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINV 113
++++K++ +K +N V+ F +C +C L ++ ++ V ++
Sbjct: 6 ILVDKLNSYKDEMIVYPAKNEKHVVTVFMDITCHYCHLLHQQLKEYNDLGITVRYLAFPR 65
Query: 114 ENGGGEIAREF 124
+ A++
Sbjct: 66 AGMNNQTAKQM 76
>d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 134
Score = 30.0 bits (66), Expect = 0.083
Identities = 12/44 (27%), Positives = 17/44 (38%)
Query: 118 GEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLS 161
G + F V P VD+V G QD + V+ L+
Sbjct: 91 GSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 134
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 29.9 bits (66), Expect = 0.13
Identities = 7/72 (9%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 43 PRAHLLNLIQAIQMAYLIIEKIDDFKQTIRGRNPVLAYFFKPSCGFCKQLEPKISTVSET 102
A +++ + + E++ ++ L + C C+ +
Sbjct: 28 AVARFRQKLESNGLPSALTERLQRIER-----RYRLLVAGEMWCPDCQINLAALDFAQRL 82
Query: 103 TSGVEFVKINVE 114
+E I+
Sbjct: 83 QPNIELAIISKG 94
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 29.2 bits (65), Expect = 0.27
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 76 PVLAYFFKPSCGFCKQLEPKISTVSE----TTSGVEFVKINVENGGGEIARE 123
P + FF C C Q E + GV+ K +V GG++ ++
Sbjct: 115 PQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKD 166
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 28.6 bits (63), Expect = 0.35
Identities = 12/108 (11%), Positives = 30/108 (27%), Gaps = 11/108 (10%)
Query: 76 PVLAYFFKPSCGFCKQLEPKISTVSETTS--GVEFVKINVENGGGEIAREFEVQAVPT-- 131
++ C+ L + + + F+ V + E R + +
Sbjct: 44 WLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFP 103
Query: 132 ---VIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKLATHYQVDLTTGT 176
++ R G + + + L H Q+D + +
Sbjct: 104 YVSILDPRTGQKLVEWHQLDVSSFLDQVTGFLG----EHGQLDGLSSS 147
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 74
Score = 27.3 bits (60), Expect = 0.39
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 81 FFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGGEIAREFEVQAVPTVIGFRNGDP 140
+ KP+C C + V I++++ + P V +G+
Sbjct: 6 YTKPACVQCTAT---KKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVV--EVDGE- 59
Query: 141 VDMVVGNADQDVIQTLVS 158
+ I+ L +
Sbjct: 60 ---HWSGFRPERIKQLQA 74
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 28.2 bits (62), Expect = 0.43
Identities = 7/69 (10%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 59 LIIEKIDDFKQTI-----RGRNPVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINV 113
+++++++ ++ + V+ F +CG+C +L +++ + V ++
Sbjct: 6 MLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPR 65
Query: 114 ENGGGEIAR 122
+ + +
Sbjct: 66 QGLDSDAEK 74
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 27.3 bits (60), Expect = 0.50
Identities = 6/64 (9%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Query: 81 FFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGG---EIAREFEVQAVPTVIGFRN 137
F + C +C + + +S ++ +++ G ++ ++ F +
Sbjct: 6 FGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVD 65
Query: 138 GDPV 141
+
Sbjct: 66 QQHI 69
>d1knga_ c.47.1.10 (A:) Thioredoxin-like protein CcmG (CycY, DsbE)
{Bradyrhizobium japonicum [TaxId: 375]}
Length = 144
Score = 26.3 bits (56), Expect = 2.1
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 105 GVEFVKINVENGGGEIAREFEVQAVPTVIGFRNGDPVDMVVGNADQDVIQTLVSKLSQKL 164
G F ++ V+ G T + R G V +VG D +++++ +K
Sbjct: 84 GNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKA 143
>d1dnva_ b.121.5.3 (A:) Densovirus capsid protein {Galleria
mellonella densovirus [TaxId: 37138]}
Length = 415
Score = 25.3 bits (55), Expect = 6.9
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 76 PVLAYFFKPSCGFCKQLEPKISTVSETTSGVEFVKINVENGGG 118
++ +KP G K T G V N+ N G
Sbjct: 228 CLIDVTYKPKMGLIKSPLNYKIIGQPTVKGTISVGDNLVNMRG 270
>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG,
phenylalanine-repressible {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 462
Score = 24.9 bits (54), Expect = 8.7
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 43 PRAHLLNLIQAIQMAYLIIEKIDD 66
PR LN Q++++A+L+ E + D
Sbjct: 442 PR---LNTQQSLELAFLVAEMLRD 462
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.389
Gapped
Lambda K H
0.267 0.0496 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 730,224
Number of extensions: 32522
Number of successful extensions: 146
Number of sequences better than 10.0: 1
Number of HSP's gapped: 131
Number of HSP's successfully gapped: 48
Length of query: 201
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 120
Effective length of database: 1,295,466
Effective search space: 155455920
Effective search space used: 155455920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)