BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5683
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RCX5|FAHD2_PONAB Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Pongo
abelii GN=FAHD2 PE=2 SV=1
Length = 314
Score = 249 bits (635), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 179/273 (65%), Gaps = 14/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + G LG++ G +INL++ D ++P + QFLE G L A+R
Sbjct: 27 MRLVQFQAPHLVG---PHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRA 83
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ SEV L P+TRPDK++C+ +NY DHC EQN P+ PF F+KF S+IVGP
Sbjct: 84 LAAQLPVLPRSEVTFLAPVTRPDKVVCVRMNYVDHCKEQNVPVPKEPFIFSKFASSIVGP 143
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ EV P ++ +DWEVELAV+IGKK + +K +AM V DWQ RN
Sbjct: 144 YDEVVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQMR-RN 201
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ + C+VNG++ Q+++++ M+ K ++++
Sbjct: 202 GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELVQSSNTNQMVFKTEDLIA 261
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S+ +T PGDVILTGTP GVGVFRKP LK
Sbjct: 262 WVSQFVTFYPGDVILTGTPPGVGVFRKPPVFLK 294
>sp|Q96GK7|FAH2A_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Homo
sapiens GN=FAHD2A PE=1 SV=1
Length = 314
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 177/273 (64%), Gaps = 14/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + G LG++ G +INL++ D ++P + QFLE G L A+R
Sbjct: 27 MRLVQFRAPHLVG---PHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRA 83
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ SEV L P+TRPDK++C+ +NY DHC EQN P+ P F+KF S+IVGP
Sbjct: 84 LAAQLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGP 143
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ EV P ++ +DWEVELAV+IGKK + +K +AM V DWQ RN
Sbjct: 144 YDEVVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQ-MRRN 201
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ + C+VNG+V Q+ +++ M+ K ++++
Sbjct: 202 GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIA 261
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S+ +T PGDVILTGTP GVGVFRKP LK
Sbjct: 262 WVSQFVTFYPGDVILTGTPPGVGVFRKPPVFLK 294
>sp|Q6P2I3|FAH2B_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2B OS=Homo
sapiens GN=FAHD2B PE=2 SV=1
Length = 314
Score = 244 bits (623), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/273 (43%), Positives = 177/273 (64%), Gaps = 14/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + G LG++ G +INL++ D ++P + QFLE G L A+R
Sbjct: 27 MRLVQFRAPHLVG---PHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRA 83
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ SEV L P+T PDK++C+ +NY DHC EQN P+ P F+KF S+IVGP
Sbjct: 84 LAAQLPVLPWSEVTFLAPVTWPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGP 143
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ EV P ++ +DWEVELAV+IGKK + +K +AM V DW + RN
Sbjct: 144 YDEVVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWL-TRRN 201
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ + C+VNG+V Q+++++ M+ K ++++
Sbjct: 202 GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIA 261
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S+ +T PGDVILTGTP GVGVFRKP LK
Sbjct: 262 WVSQFVTFYPGDVILTGTPPGVGVFRKPPVFLK 294
>sp|Q3TC72|FAHD2_MOUSE Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Mus
musculus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 240 bits (612), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 179/273 (65%), Gaps = 15/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + LG++ G +++L++ DS++P +VQFLE G L A+R
Sbjct: 27 MRLVQFQAPHLE---EPHLGLESGVGGGVVDLNAFDSTLPKTMVQFLEQGETTLSVARRA 83
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ S+V L P+TRP+K++C+ LNY DHC EQN P++P F+KF S+IVGP
Sbjct: 84 LATQLPVIPRSQVTFLAPVTRPEKVICVGLNYADHCQEQNVRVPKSPIIFSKFSSSIVGP 143
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ E+ P ++ +DWEVE+AV+IGKK + +K + M V DWQ RN
Sbjct: 144 YDEIILPPE-SKEVDWEVEMAVVIGKKGKHIKATDVMAHVAGFTVAHDVSARDWQM--RN 200
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ + C+VNG+V Q+++++ M+ K +++
Sbjct: 201 GKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKICCRVNGEVVQSSNTNQMVFKTEYLIA 260
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S+ +TL PGD++LTGTP GVG+FRKP LK
Sbjct: 261 WVSQFVTLYPGDLLLTGTPPGVGMFRKPPVFLK 293
>sp|Q2KIB0|FAHD2_BOVIN Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos
taurus GN=FAHD2 PE=2 SV=1
Length = 314
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 177/273 (64%), Gaps = 14/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + G LG++ G +I+L++ + ++P +V+FLE G L +R
Sbjct: 27 MRLVQFQAPHLAG---PHLGLESGNGGGVIDLNAFEPTLPKTMVEFLEQGEATLSVVRRA 83
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ SEV L P+TRPDK++C+ +NY DHC EQN P+ P F+KF S IVGP
Sbjct: 84 LATQLPVLPRSEVTFLAPVTRPDKVVCVGMNYADHCREQNVPVPKEPIIFSKFASAIVGP 143
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ + P ++ +DWEVELAV+IGK+ + +K +AM V DWQ RN
Sbjct: 144 YDNIILPPE-SQEVDWEVELAVVIGKRGKYIKATDAMAHVAGFTVAHDVSARDWQMG-RN 201
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ + C+VNG++ Q+++++ M+ K E+++
Sbjct: 202 GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELMQSSNTNQMVFKTEELIT 261
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S+ +TL PGD+ILTGTP GVGVFRKP LK
Sbjct: 262 WVSQFVTLYPGDIILTGTPPGVGVFRKPPVFLK 294
>sp|Q6GLT8|FAHD2_XENLA Fumarylacetoacetate hydrolase domain-containing protein 2
OS=Xenopus laevis GN=fahd2 PE=2 SV=1
Length = 319
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 178/274 (64%), Gaps = 16/274 (5%)
Query: 1 MRFVQYKPLNGNGNTPQ-RLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKR 59
MR VQ++ + ++P R+G++L+ G II+L++ D S+P + +FLE G L+ AK
Sbjct: 32 MRLVQFQ----SSDSPSPRIGLELQDGGNIIDLNAYDPSLPCRMREFLEMGESALQTAKS 87
Query: 60 MVSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVG 119
+ + ++ S + LL PIT P+KI+CI +NY DHC EQN P+ P FNKF S+IVG
Sbjct: 88 ALDSNQHILSRSNISLLAPITNPEKIICIGMNYVDHCLEQNVPVPKEPIIFNKFASSIVG 147
Query: 120 PFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---------ESDWQKSSR 170
P + P ++ +DWE ELA +IGKK +++K +AM+ V DWQ +
Sbjct: 148 PSDPIRIPEE-SQEVDWEAELAFVIGKKGKNIKEEDAMDHVVGYTVAHDVSARDWQMK-K 205
Query: 171 NGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIV 230
NG QWL K+ DTFCPLGP++V K+ ++DPH++ + C+VNG + QN++++ M+ K ++
Sbjct: 206 NGKQWLLGKTFDTFCPLGPALVTKDVISDPHNLGIRCRVNGDLVQNSNTNQMVFKTEALI 265
Query: 231 SYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++ S+ +TL PGDV LTGTP GVGVFRKP LK
Sbjct: 266 AWASKFVTLNPGDVFLTGTPPGVGVFRKPPVFLK 299
>sp|B2RYW9|FAHD2_RAT Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus
norvegicus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 178/273 (65%), Gaps = 15/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + +G++ G +++L++ D ++P +VQFLE G L A+R
Sbjct: 27 MRLVQFQAPHLE---EPHVGLESGIGGGVVDLNTFDPALPKTMVQFLERGETALSVARRA 83
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ S+V L P+TRPDK++C+ LNY DHC EQN P+ P F+KF S+IVGP
Sbjct: 84 LAAQLPLIPRSQVTFLAPVTRPDKVICVGLNYADHCQEQNVRVPKNPIIFSKFSSSIVGP 143
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ + P ++ +DWEVE+AV+IGKK + +K + M V DWQ RN
Sbjct: 144 YDSIILPPE-SKEVDWEVEMAVVIGKKGKHIKATDVMAYVAGFTVAHDVSARDWQM--RN 200
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ ++C+VNG++ Q+++++ M+ K ++++
Sbjct: 201 GKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKISCRVNGEIVQSSNTNQMVFKTEDLIA 260
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S+ +TL PGD++LTGTP GVG+FRKP LK
Sbjct: 261 WVSQFVTLYPGDILLTGTPPGVGMFRKPPVFLK 293
>sp|Q54BF3|FAHD2_DICDI Fumarylacetoacetate hydrolase domain-containing protein 2 homolog
OS=Dictyostelium discoideum GN=fahd2 PE=3 SV=1
Length = 305
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 24/277 (8%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLE-GGPELLEKAKR 59
++ V Y P G +RLG LE + II+L S D S+PN++ FL + K
Sbjct: 9 IKLVTYIP--NVGEQSKRLGALLENS--IIDLCSADKSIPNDMRSFLSLNSTDKWSKVIN 64
Query: 60 MVSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVG 119
+++ E + P KI+CI LNYK+H +E P+ P F+KF + I G
Sbjct: 65 VINNINNRRIPIENCKIKAPIEPGKIICIGLNYKEHANEAKMAIPKEPIVFSKFDNAICG 124
Query: 120 PFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAME---------SVFESDWQKSSR 170
P + P + +D+EVEL V+IGK+ ++V +A++ V DWQ +
Sbjct: 125 PNDSIIKPVE-SDEVDYEVELVVVIGKQAKNVSESDALQYVAGYTVGNDVSARDWQLR-K 182
Query: 171 NGGQWLFAKSLDTFCPLGPSVVMK--------EYLNDPHDVTLTCKVNGQVKQNASSSNM 222
N QWL K+ DTF P+GPS+V+ + DP+++++ C +NGQV QN+++
Sbjct: 183 NNSQWLLGKTFDTFAPIGPSIVINPEVAALSDDTYFDPNNLSIKCTLNGQVVQNSTTKEF 242
Query: 223 LHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
+ I +VSYLS++ TL PGD+I TGTP+GVG RKP
Sbjct: 243 IFNIQTVVSYLSKLFTLNPGDIIFTGTPSGVGFIRKP 279
>sp|O06724|YISK_BACSU Uncharacterized protein YisK OS=Bacillus subtilis (strain 168)
GN=yisK PE=2 SV=1
Length = 301
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 130/237 (54%), Gaps = 23/237 (9%)
Query: 38 SMPNNLVQFLEGGPELLEKAKRMVSECK--------CMVKLSEVELLPPITRPDK-ILCI 88
++P +L++ + G + + A+++ K M LSEV+L PI +P K I+CI
Sbjct: 38 TIPGSLIECIAEGDKFVAHARQLAEWAKKPNDELGSFMYSLSEVKLHAPIPKPSKNIICI 97
Query: 89 ALNYKDHCDEQNK--TYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGK 146
NY+DH E PE P F K P T+ G V VT LD+E ELAV+IGK
Sbjct: 98 GKNYRDHAIEMGSEADIPEHPMVFTKSPVTVTGHGDIVKSHEEVTSQLDYEGELAVVIGK 157
Query: 147 KTRDVKPHEAMESVF---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYL 197
+ +A + VF D QK + Q+ KSLDT CP+GP +V K +
Sbjct: 158 SGTRISKEDAYDHVFGYTIVNDITARDLQKRHK---QFFIGKSLDTTCPMGPVLVHKSSI 214
Query: 198 NDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
+P + + +VNG+++Q+ S+S+M+ IPE++ LS+ +TL GD+I TGTP+GVG
Sbjct: 215 QEPERLKVETRVNGELRQSGSASDMIFSIPELIETLSKGMTLEAGDIIATGTPSGVG 271
>sp|Q9UYW0|Y1397_PYRAB Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=PYRAB13970 PE=3 SV=1
Length = 225
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 109/188 (57%), Gaps = 12/188 (6%)
Query: 80 TRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVE 139
RP KI+ +A NY +H E PE P F K PS ++GP S + P R +D EVE
Sbjct: 13 VRPTKIIALAKNYAEHAREMGSEPPEEPVIFLKPPSALIGPNSVIVLPRRSKR-VDHEVE 71
Query: 140 LAVIIGKKTRDVKPHEAMESVF---------ESDWQKSSRNGGQ-WLFAKSLDTFCPLGP 189
LAVIIGK+ ++V +A + + D Q +R G W +K DTF P+GP
Sbjct: 72 LAVIIGKRAKNVPAEKAFDYILGYTILLDITARDLQAEARKKGYPWTVSKGFDTFAPIGP 131
Query: 190 SVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249
+V K L DP D+ + KVNG+V+Q +S M+ KIPE++ Y+S ++TL PGD+I TGT
Sbjct: 132 RIVDKREL-DPSDLEIGLKVNGKVRQLGRTSEMIFKIPELIEYISSIMTLEPGDIIATGT 190
Query: 250 PAGVGVFR 257
P GVG R
Sbjct: 191 PPGVGPLR 198
>sp|O58377|Y643_PYRHO Uncharacterized protein PH0643 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0643 PE=3 SV=1
Length = 230
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 108/188 (57%), Gaps = 12/188 (6%)
Query: 80 TRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVE 139
RP KI+ +A NY +H E PE P F K PS ++GP S + P R +D EVE
Sbjct: 18 VRPTKIVALAKNYAEHAREMGSEPPEEPIIFLKPPSALIGPGSSIILPRRSKR-VDHEVE 76
Query: 140 LAVIIGKKTRDVKPHEAMESVF---------ESDWQKSSRNGGQ-WLFAKSLDTFCPLGP 189
LAVI+GK+ ++V +A + + D Q +R G W +K DTF P+GP
Sbjct: 77 LAVIMGKRAKNVPASKAFDYILGYTIILDITARDLQAEARKKGYPWTISKGFDTFAPIGP 136
Query: 190 SVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249
VV L DP D+ + KVNG+++Q +S M+ KIPE++ Y+S ++TL PGD+I TGT
Sbjct: 137 RVVDSREL-DPSDLEIGLKVNGKIRQLGRTSQMIFKIPELIEYISHIMTLEPGDIIATGT 195
Query: 250 PAGVGVFR 257
P GVG R
Sbjct: 196 PPGVGPLR 203
>sp|Q59050|Y1656_METJA Uncharacterized protein MJ1656 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1656 PE=3 SV=1
Length = 237
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 81 RPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVEL 140
+P KI+C+ LNY DH E N PE P F K S I+ + P +++ +D+EVEL
Sbjct: 36 KPTKIICVGLNYIDHAKELNMEIPEYPIIFLKPTSAIIYNEDYIIRP-RISKRVDYEVEL 94
Query: 141 AVIIGKKTRDVKPHEA---------MESVFESDWQKSSRNGGQWLFAKSLDTFCPLGPSV 191
A++IGKK +++K EA + V D Q+ GQW AKS DTFCP+GP +
Sbjct: 95 AIVIGKKCKNIKKDEANDYIMGYTILNDVTARDLQQKD---GQWTRAKSFDTFCPIGPRI 151
Query: 192 VMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPA 251
V DP ++ + C+VNG++KQ +++ NM+ + E+V +++ ++TL PGD+I TGTP
Sbjct: 152 VKD---IDPMNLNIECRVNGEIKQKSNTKNMIFDVYELVEFVASIMTLYPGDIISTGTPP 208
Query: 252 GVGVFR 257
GVG +
Sbjct: 209 GVGELK 214
>sp|B1Z1Y2|UGL_BURA4 Ureidoglycolate lyase OS=Burkholderia ambifaria (strain MC40-6)
GN=BamMC406_5393 PE=3 SV=1
Length = 282
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 12/190 (6%)
Query: 79 ITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEV 138
+ R K + I LNY DH E P+ P F K+ S+I GP + P + DWEV
Sbjct: 67 VGRVGKFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEV 125
Query: 139 ELAVIIGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGP 189
EL V+IG +DV A++ V E +WQ GGQW K DTF P+GP
Sbjct: 126 ELGVVIGTTCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGP 183
Query: 190 SVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249
+V ++ + DP V L +++G QN ++ M+ + ++V+YLS +TL PGDVI TGT
Sbjct: 184 WLVTRDEVPDPQRVDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVITTGT 243
Query: 250 PAGVGVFRKP 259
P GVG+ KP
Sbjct: 244 PPGVGMGIKP 253
>sp|A0B3M8|UGL_BURCH Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain HI2424)
GN=Bcen2424_5521 PE=3 SV=1
Length = 282
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 12/185 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
K + I LNY DH E P+ P F K+ S+I GP + P + DWEVEL V+
Sbjct: 72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEVELGVV 130
Query: 144 IGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMK 194
IG K +DV A++ V E +WQ GGQW K DTF P+GP +V +
Sbjct: 131 IGAKCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGPWLVTR 188
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
+ + DP + L +++G QN ++ M+ + ++V+YLS +TL PGDVI TGTP GVG
Sbjct: 189 DEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVITTGTPPGVG 248
Query: 255 VFRKP 259
+ KP
Sbjct: 249 MGVKP 253
>sp|B1K3Y3|UGL_BURCC Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain MC0-3)
GN=Bcenmc03_4750 PE=3 SV=1
Length = 282
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 12/185 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
K + I LNY DH E P+ P F K+ S+I GP + P + DWEVEL V+
Sbjct: 72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEVELGVV 130
Query: 144 IGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMK 194
IG K +DV A++ V E +WQ GGQW K DTF P+GP +V +
Sbjct: 131 IGAKCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGPWLVTR 188
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
+ + DP + L +++G QN ++ M+ + ++V+YLS +TL PGDVI TGTP GVG
Sbjct: 189 DEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVITTGTPPGVG 248
Query: 255 VFRKP 259
+ KP
Sbjct: 249 MGVKP 253
>sp|Q1BJJ1|UGL_BURCA Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain AU 1054)
GN=Bcen_5340 PE=3 SV=1
Length = 282
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 12/185 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
K + I LNY DH E P+ P F K+ S+I GP + P + DWEVEL V+
Sbjct: 72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEVELGVV 130
Query: 144 IGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMK 194
IG K +DV A++ V E +WQ GGQW K DTF P+GP +V +
Sbjct: 131 IGAKCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGPWLVTR 188
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
+ + DP + L +++G QN ++ M+ + ++V+YLS +TL PGDVI TGTP GVG
Sbjct: 189 DEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVITTGTPPGVG 248
Query: 255 VFRKP 259
+ KP
Sbjct: 249 MGVKP 253
>sp|A9ALD1|UGL_BURM1 Ureidoglycolate lyase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=Bmul_3283 PE=3 SV=1
Length = 282
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 103/190 (54%), Gaps = 12/190 (6%)
Query: 79 ITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEV 138
+ R K + I LNY DH E P+ P F K+ S+I GP + P + DWEV
Sbjct: 67 VGRVGKFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEV 125
Query: 139 ELAVIIGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGP 189
EL V+IG +DV A++ V E +WQ GGQW K DTF P+GP
Sbjct: 126 ELGVVIGAPCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGP 183
Query: 190 SVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249
+V ++ + DP + L +V+G QN ++ M+ + ++++YLS +TL PGDVI TGT
Sbjct: 184 WLVTRDEVPDPQSLDLWLEVDGHRYQNGNTRTMVFTVAQLIAYLSSCMTLQPGDVITTGT 243
Query: 250 PAGVGVFRKP 259
P GVG+ KP
Sbjct: 244 PPGVGMGIKP 253
>sp|Q0B628|UGL_BURCM Ureidoglycolate lyase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=Bamb_4846 PE=3 SV=1
Length = 282
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 24/268 (8%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
M+ ++Y P + ++ G+ L+ NG I +LS+ + + + + G L R
Sbjct: 1 MKLLRYGP-----SGQEKPGI-LDANGRIRDLSAHVPDLAGDALS--DAGLTRL----RA 48
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
+ + E + + R K + I LNY DH E P+ P F K+ S+I GP
Sbjct: 49 IDPATLPLVSGEPRIGACVGRVGKFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGP 108
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAME---------SVFESDWQKSSRN 171
+ P + DWEVEL V+IG +DV A++ V E +WQ
Sbjct: 109 NDGIDIPKGSVK-TDWEVELGVVIGTTCKDVDEARALDYVAGYCVVNDVSEREWQ--IER 165
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
GGQW K DTF P+GP +V ++ + DP + L +V+G QN ++ M+ + ++V+
Sbjct: 166 GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEVDGHRYQNGNTRTMVFTVAQLVA 225
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKP 259
YLS +TL PGDVI TGTP GVG+ KP
Sbjct: 226 YLSTCMTLQPGDVITTGTPPGVGMGIKP 253
>sp|B4EKX6|UGL_BURCJ Ureidoglycolate lyase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=BceJ2315_61450 PE=3 SV=1
Length = 282
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 102/185 (55%), Gaps = 12/185 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
K + I LNY DH E P+ P F K+ S+I GP + P + DWEVEL V+
Sbjct: 72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEVELGVV 130
Query: 144 IGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMK 194
IG K +DV A++ V E +WQ GGQW K DTF P+GP +V +
Sbjct: 131 IGAKCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGPWLVTR 188
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
+ + DP + L +++G QN ++ M+ + ++++YLS +TL PGDVI TGTP GVG
Sbjct: 189 DEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLIAYLSTCMTLQPGDVITTGTPPGVG 248
Query: 255 VFRKP 259
+ KP
Sbjct: 249 MGIKP 253
>sp|Q39BA7|UGL_BURS3 Ureidoglycolate lyase OS=Burkholderia sp. (strain 383)
GN=Bcep18194_B0137 PE=1 SV=1
Length = 282
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 12/185 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
K + I LNY DH E P+ P F K+ S+I GP + P + DWEVEL V+
Sbjct: 72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVK-TDWEVELGVV 130
Query: 144 IGKKTRDVKPHEAME---------SVFESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMK 194
IG +DV A++ V E +WQ GGQW K DTF P+GP +V +
Sbjct: 131 IGATCKDVDEARALDYVAGYCVVNDVSEREWQ--IERGGQWDKGKGFDTFGPIGPWLVTR 188
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
+ + DP + L +++G QN ++ M+ + ++++YLS +TL PGDVI TGTP GVG
Sbjct: 189 DEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLIAYLSSCMTLQPGDVITTGTPPGVG 248
Query: 255 VFRKP 259
+ KP
Sbjct: 249 MGIKP 253
>sp|O28058|Y2225_ARCFU Uncharacterized protein AF_2225 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2225 PE=3 SV=1
Length = 250
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 68 VKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCP 127
V L+ V+ LPP+ P KI+ + LNY DH +E N PE P F K + ++G + P
Sbjct: 30 VPLTAVKFLPPVV-PSKIIAVGLNYIDHAEELNMPVPEEPILFMKPSTAVIGHDDCIILP 88
Query: 128 TNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF------ESDWQKSSRNGGQWLFAKSL 181
+++ +D+E ELAV+I + R+V A + + + + GQW AKS
Sbjct: 89 -QISQRVDYEGELAVVIAEDCRNVPETNAADYILGYTCFNDVTARDLQAKDGQWTRAKSF 147
Query: 182 DTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLP 241
DTF PLGP + ++DP + + +VNG+V Q +++SN++ + ++VS++S ++TL
Sbjct: 148 DTFAPLGPYIA---EIDDPSKLGIQTRVNGKVVQKSNTSNLIFDVFQLVSFVSSVMTLKA 204
Query: 242 GDVILTGTPAGVGVFR 257
GDVI TGTPAGVG+ +
Sbjct: 205 GDVIATGTPAGVGMLK 220
>sp|Q6GIC0|Y930_STAAR Uncharacterized protein SAR0930 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR0930 PE=3 SV=1
Length = 300
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 144/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G +++ ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 RLYVFTKAASSLTGDNAKIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q5HHB6|Y973_STAAC Uncharacterized protein SACOL0973 OS=Staphylococcus aureus (strain
COL) GN=SACOL0973 PE=3 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q99VC2|Y968_STAAM Uncharacterized protein SAV0968 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV0968 PE=1 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q2FZT4|Y906_STAA8 Uncharacterized protein SAOUHSC_00906 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00906 PE=3 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q2FIA7|Y871_STAA3 Uncharacterized protein SAUSA300_0871 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0871 PE=3 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q7A1B6|Y850_STAAW Uncharacterized protein MW0850 OS=Staphylococcus aureus (strain
MW2) GN=MW0850 PE=3 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q6GAV8|Y838_STAAS Uncharacterized protein SAS0838 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS0838 PE=3 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q2YWW3|Y837_STAAB Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q7A6H3|Y829_STAAN Uncharacterized protein SA0829 OS=Staphylococcus aureus (strain
N315) GN=SA0829 PE=1 SV=1
Length = 300
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L+ V + P L+ L+ L
Sbjct: 1 MKFLSFKY-----NDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NYKDH +E N E
Sbjct: 56 FQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEV-E 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G + + ++T LD+E EL ++IGK + A++ V+
Sbjct: 115 KLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN +++Q+ ++
Sbjct: 175 INDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259
M+ KI E++ +S+ + L PGD+I TGTPAGVG +P
Sbjct: 235 GEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQP 274
>sp|Q4L4Y4|Y1982_STAHJ Uncharacterized protein SH1982 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1982 PE=3 SV=1
Length = 301
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 146/285 (51%), Gaps = 27/285 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ + N + GV+++R + +L V + P L++ L+ L
Sbjct: 1 MKFLSF-----NYKDAESYGVKVKRKDAVWDLKKVFAEFGEGDFHPQTLLEGLQQNQTLD 55
Query: 54 -LEKAKRMVSECK-------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPE 105
E+ ++ V + + +++E LPP+T P+ ++ NY+DH E N +
Sbjct: 56 FQEQVRKAVVAAEDSGKADEFKIAFNDIEFLPPVTPPNNVIAFGRNYQDHASELNHEV-Q 114
Query: 106 TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---- 161
+ F K S++ G S + ++T LD+E EL ++IGK + A++ ++
Sbjct: 115 RLYVFTKAASSLTGDESTIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYIYGYTI 174
Query: 162 --ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASS 219
+ +K+ Q +KSL CP+GP +V K+ L P +V + KVN ++Q+ ++
Sbjct: 175 INDITDRKAQNEQDQAFLSKSLTGGCPMGPYIVTKDELPTPENVNIVTKVNNDIRQDGNT 234
Query: 220 SNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
S M++KI +++ +S+ + L PGD+I TGTPAGVG +P + L+
Sbjct: 235 SQMINKIDDLIEEISKYVALHPGDIIATGTPAGVGAGLQPPQFLQ 279
>sp|Q49WA8|Y1806_STAS1 Uncharacterized protein SSP1806 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1806 PE=3 SV=1
Length = 301
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
Query: 41 NNLVQFLEGGPELLEKAKRMVSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQN 100
N +V F E + + A+ V+ S++E LPP+T + ++ NY+DH +E N
Sbjct: 51 NQVVDFQEQVRKAVVAAEDSGKGEDYKVQFSDIEFLPPVTPTNNVIAFGRNYQDHANELN 110
Query: 101 KTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESV 160
+ + F K S++ G S + ++T LD+E EL ++IGK + A++ V
Sbjct: 111 HEV-QRLYVFTKAASSLTGDNSTIPNHKDITDQLDYEGELGIVIGKSGEKIPKGLALDYV 169
Query: 161 F------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVK 214
+ + +K+ Q +KSL CP+GP +V K+ L P DV + KVN ++
Sbjct: 170 YGYTIINDITDRKAQNAQDQAFLSKSLTGGCPVGPYIVTKDELPTPEDVNIVTKVNNDIR 229
Query: 215 QNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
Q+ ++ M+ KI E++ +S+ + L PGD+I TGTPAGVG P + L+
Sbjct: 230 QDGNTGQMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMNPPQFLQ 279
>sp|Q8CPT8|Y665_STAES Uncharacterized protein SE_0665 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_0665 PE=3 SV=1
Length = 301
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L V + P L+ L+ L
Sbjct: 1 MKFLSFKH-----NDRTSYGVKVKREDAVWDLPMVFAEFGDKDFNPKTLIAGLQQNQTLD 55
Query: 54 -LEKAKRMV---------SECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTY 103
E+ ++ V E K + ++++ LPP+T P+ ++ NY+DH E N
Sbjct: 56 FQEQVRKAVVAAEESGRDEEFKLL--FTDIDFLPPVTPPNNVIAFGRNYEDHASELNHEV 113
Query: 104 PETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF-- 161
++ + F K S++ G + + ++T LD+E EL ++IGK + A++ ++
Sbjct: 114 -DSLYVFTKAASSLTGDEATIPNHKDITEQLDYEGELGIVIGKSGEKIPRGLALDYIYGY 172
Query: 162 ----ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNA 217
+ + + + Q +KSL CP+GP +V K+ L P +V + KVN +++Q+
Sbjct: 173 TIINDITDRTAQSSHDQAFLSKSLTGACPMGPYIVTKDELPAPENVNIVTKVNNEIRQDG 232
Query: 218 SSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++ M+ KI E++ +S+ + L PGD+I TGTPAGVG +P + L+
Sbjct: 233 NTGEMILKIDELIEKISKYVALHPGDIIATGTPAGVGAGLQPPQFLQ 279
>sp|Q5HQJ3|Y556_STAEQ Uncharacterized protein SERP0556 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0556 PE=3 SV=1
Length = 301
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM------PNNLVQFLEGGPEL- 53
M+F+ +K N GV+++R + +L V + P L+ L+ L
Sbjct: 1 MKFLSFKH-----NDRTSYGVKVKREDAVWDLPMVFAEFGDKDFNPKTLIAGLQQNQTLD 55
Query: 54 -LEKAKRMV---------SECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTY 103
E+ ++ V E K + ++++ LPP+T P+ ++ NY+DH E N
Sbjct: 56 FQEQVRKAVVAAEESGRDEEFKLL--FTDIDFLPPVTPPNNVIAFGRNYEDHASELNHEV 113
Query: 104 PETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF-- 161
++ + F K S++ G + + ++T LD+E EL ++IGK + A++ ++
Sbjct: 114 -DSLYVFTKAASSLTGDEATIPNHKDITEQLDYEGELGIVIGKSGEKIPRGLALDYIYGY 172
Query: 162 ----ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNA 217
+ + + + Q +KSL CP+GP +V K+ L P +V + KVN +++Q+
Sbjct: 173 TIINDITDRTAQSSHDQAFLSKSLTGACPMGPYIVTKDELPAPENVNIVTKVNNEIRQDG 232
Query: 218 SSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++ M+ KI E++ +S+ + L PGD+I TGTPAGVG +P + L+
Sbjct: 233 NTGEMILKIDELIEKISKYVALHPGDIIATGTPAGVGAGLQPPQFLQ 279
>sp|Q9RPU5|HPAG_SALDU 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Salmonella dublin GN=hpaG
PE=3 SV=1
Length = 429
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 78 PITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWE 137
P++ + + LNY DH E T P+ P F K P+T P NV Y+ +E
Sbjct: 218 PLSATGTLFALGLNYADHASELAFTPPKEPLVFIKAPNTFTEHHQTSVRPNNV-EYMHYE 276
Query: 138 VELAVIIGKKTRDVKPHEAMESVFE----SDWQKSSRNGGQW---LFAKSLDTFCPLGPS 190
EL V+IGK R V EAME V +D+ + L KS D P+GP
Sbjct: 277 AELVVVIGKTARKVSEAEAMEYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPIGPW 336
Query: 191 VVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250
+V KE ++DPH++TL VNG+++Q ++++++ IP ++SYLSE +TL PGD+I TGTP
Sbjct: 337 IVDKEAVSDPHNLTLRTFVNGELRQEGTTADLIFSIPFLISYLSEFMTLQPGDMIATGTP 396
Query: 251 AGV 253
G+
Sbjct: 397 KGL 399
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIV---GPFSEVTCPTNVTRYLDWE---- 137
+ +ALN++ D + + + P+ N P T V P + V Y E
Sbjct: 5 VFAVALNHRSQLDAWQEAFSQPPY--NAPPKTAVWFIKPRNTVIRHGEPILYPQGEKVLS 62
Query: 138 -VELAVIIGKKTRDVKPHEAMESVFESDWQKSSRNGGQWLF-----AKSLDTFCPLGPSV 191
+A+I+GK + A E + + + AK D FCPLG
Sbjct: 63 GATVALIVGKTASRKRSEAAAEYIAGYALANEVSLPEESFYRPAIKAKCRDGFCPLGEMA 122
Query: 192 VMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250
L+D ++T+ ++NG+ + +++++ +++S LSE TL PGD IL GTP
Sbjct: 123 P----LSDVDNLTIITEINGREADHWNTADLQRSAAQLLSALSEFATLNPGDAILLGTP 177
>sp|Q9P7L4|YOS9_SCHPO Uncharacterized hydrolase C21C3.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC21C3.09c PE=3 SV=1
Length = 221
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 17/190 (8%)
Query: 79 ITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP-FSEVTCPTNVTRYLDWE 137
++R K++CI NY H E N +P PFFF K S IV P + P +V+ + +E
Sbjct: 2 LSRAGKVVCIGRNYAAHIRELNNPFPTKPFFFLKPTSAIVEPGHGNLIIPPDVSAH--YE 59
Query: 138 VELAVIIGKK---TRDVKPHEAMESV--FESDWQKSSRN--------GGQWLFAKSLDTF 184
VEL +I+ + R V + ++S+ + ++RN G W FAK DTF
Sbjct: 60 VELGLIMKDRLPARRPVSSNSWLDSIGAYFVGIDMTARNIQNEAKKKGLPWSFAKGYDTF 119
Query: 185 CPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDV 244
P+GP ++ K + DPH+V L +NG+V Q S+S ML+KIP+I S ++E ++L PGD+
Sbjct: 120 LPVGP-IIPKHLIPDPHNVILELSLNGKVVQKDSTSLMLNKIPKIFSSITEAMSLNPGDL 178
Query: 245 ILTGTPAGVG 254
+LTGTP GVG
Sbjct: 179 VLTGTPKGVG 188
>sp|Q2HJ98|FAHD1_BOVIN Acylpyruvase FAHD1, mitochondrial OS=Bos taurus GN=FAHD1 PE=2 SV=1
Length = 221
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
I+C+ NY DH E P P F K PST P TR L E+ELAV++
Sbjct: 17 IVCVGRNYADHVREMQSAAPSEPVLFLK-PSTAYAPEGSPVLVPAYTRNLHHELELAVVM 75
Query: 145 GKKTRDVKPHEAMESVF---------ESDWQKSSRNGG-QWLFAKSLDTFCPLGPSVVMK 194
GK+ R V AM+ V D Q + G W AKS CP+ + V K
Sbjct: 76 GKRCRAVSEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVS-AFVPK 134
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
E + DPH++ L KVNG+++Q +S+M+ IP I+SY+S+++TL GD+ILTGTP GVG
Sbjct: 135 EKIPDPHNLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIMTLEEGDIILTGTPKGVG 194
>sp|P37352|HPCE_ECOLX Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase
OS=Escherichia coli GN=hpcE PE=1 SV=2
Length = 427
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
+ + LNY DH E PE P F K P+T+ G P N+ Y+ +E EL V+I
Sbjct: 225 LFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNI-EYMHYEAELVVVI 283
Query: 145 GKKTRDVKPHEAMESVFE----SDWQKSSRNGGQW---LFAKSLDTFCPLGPSVVMKEYL 197
GK+ R+V +AM+ V +D+ + L KS D P+ ++V KE +
Sbjct: 284 GKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPMLSTIVPKEAI 343
Query: 198 NDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGV 253
DPH++TL VNG+++Q ++++++ +P +++YLSE +TL PGD+I TGTP G+
Sbjct: 344 PDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGL 399
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 85 ILCIALNYKDHCDEQNKTY--------PETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDW 136
I +ALN++ D + + P+T +F K +T++G + P L
Sbjct: 5 IFAVALNHRSQLDAWQEAFQQSPIKAPPKTAVWFIKPRNTVIGCGEPIPFPQG--ENLLS 62
Query: 137 EVELAVIIGKKTRDVKPHEAMESVFESDWQKSSRNGGQWLF-----AKSLDTFCPLGPSV 191
+A+I+GK V+ +A E + + + AK D FCP+G +V
Sbjct: 63 GATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPIGETV 122
Query: 192 VMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250
L++ ++T+ ++NG+ + ++S++ +++S LSE TL PGD IL GTP
Sbjct: 123 A----LSNVDNLTIYTEINGRPADHWNTSDLQRNAAQLLSALSEFATLNPGDAILLGTP 177
>sp|Q46978|HPAG_ECOLX 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Escherichia coli GN=hpaG PE=3
SV=1
Length = 429
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
+ + LNY DH E PE P F K P+T+ G P N+ Y+ +E EL V+I
Sbjct: 225 LFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNI-EYMHYEAELVVVI 283
Query: 145 GKKTRDVKPHEAMESVFE----SDWQKSSRNGGQW---LFAKSLDTFCPLGPSVVMKEYL 197
GK+ R+V +AM+ V +D+ + L KS D P+ ++V KE +
Sbjct: 284 GKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPMLSTIVPKEAI 343
Query: 198 NDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGV 253
DPH++TL VNG+++Q ++++++ +P +++YLSE +TL PGD+I TGTP G+
Sbjct: 344 PDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGL 399
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPF--------FFNKFPSTIVGPFSEVTCPTNVTRYLDW 136
I +ALN++ D + + ++P+ +F K +T++G + P + L
Sbjct: 5 IFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNTVIGCGEPIPFPQG-EKVLSG 63
Query: 137 EVELAVIIGKKTRDVKPHEAMESVFESDWQKSSRNGGQWLF-----AKSLDTFCPLGPSV 191
+A+I+GK V+ +A E + + + AK D FCP+G +V
Sbjct: 64 AT-VALIVGKTATKVREEDAAEYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPIGETV 122
Query: 192 VMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250
L++ ++T+ ++NG+ + +++++ +++S LSE TL PGD IL GTP
Sbjct: 123 A----LSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSALSEFATLNPGDAILLGTP 177
>sp|Q6P587|FAHD1_HUMAN Acylpyruvase FAHD1, mitochondrial OS=Homo sapiens GN=FAHD1 PE=1
SV=2
Length = 224
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
I+C+ NY DH E P F K PST P TR L E+EL V++
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 145 GKKTRDVKPHEAMESV---------FESDWQKSSRNGG-QWLFAKSLDTFCPLGPSVVMK 194
GK+ R V AM+ V D Q + G W AKS CP+ + V K
Sbjct: 79 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVS-AFVPK 137
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
E + DPH + L KVNG+++Q +S+M+ IP I+SY+S++ITL GD+ILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 197
>sp|Q5RDW0|FAHD1_PONAB Acylpyruvase FAHD1, mitochondrial OS=Pongo abelii GN=FAHD1 PE=2
SV=1
Length = 224
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
I+C+ NY DH E P F K PST P TR L E+EL V++
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 145 GKKTRDVKPHEAMESV---------FESDWQKSSRNGG-QWLFAKSLDTFCPLGPSVVMK 194
G++ R V AM+ V D Q + G W AKS CP+ + V K
Sbjct: 79 GRRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVS-AFVPK 137
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
E + DPH + L KVNG+++Q +S+M+ IP I+SY+S++ITL GD+ILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 197
>sp|Q8R0F8|FAHD1_MOUSE Acylpyruvase FAHD1, mitochondrial OS=Mus musculus GN=Fahd1 PE=1
SV=2
Length = 227
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
I+C+ NY DH E T P F K PST P R L EVEL V++
Sbjct: 23 IVCVGRNYADHVKEMRSTVLSEPVLFLK-PSTAYAPEGSPVLMPAYCRNLHHEVELGVLL 81
Query: 145 GKKTRDVKPHEAMESVF---------ESDWQKSSRNGG-QWLFAKSLDTFCPLGPSVVMK 194
GK+ + AM+ V D Q+ + G W AKS + CP+ + V K
Sbjct: 82 GKRGEAIPEAAAMDYVAGYALCLDMTARDVQEECKKKGLPWTLAKSFTSSCPVS-AFVPK 140
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
E + DPH + L KVNG+++Q +S+M+ IP I+SY+S++ITL GD+ILTGTP GVG
Sbjct: 141 EKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLILTGTPKGVG 200
>sp|Q6AYQ8|FAHD1_RAT Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus GN=Fahd1
PE=2 SV=1
Length = 221
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 85 ILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVII 144
I+C+ NY DH E T P F K PST P R L EVEL V++
Sbjct: 17 IVCVGRNYADHVKEMRSTVLSEPVLFLK-PSTAYAPEGSPVLMPAYCRNLHHEVELGVLL 75
Query: 145 GKKTRDVKPHEAMESVF---------ESDWQKSSRNGG-QWLFAKSLDTFCPLGPSVVMK 194
G++ V AM+ V D Q + G W AKS + CP+ + V K
Sbjct: 76 GRRGEAVPEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTSSCPVS-AFVPK 134
Query: 195 EYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVG 254
E + DPH + L KVNG+++Q +S+M+ IP I+SY+S++ITL GD+ILTGTP GVG
Sbjct: 135 EKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLILTGTPKGVG 194
Query: 255 VFRK 258
++
Sbjct: 195 AVKE 198
>sp|P34673|YO23_CAEEL Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans
GN=ZK688.3 PE=3 SV=1
Length = 214
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
KI+C+ NYKDH E P+ P F K ++ + + P + L EVEL V+
Sbjct: 13 KIVCVGRNYKDHALELGNAIPKKPMLFVKTVNSFIVEGEPIVAPPGC-QNLHQEVELGVV 71
Query: 144 IGKKTRDVKPHEAMESV---------FESDWQKSSRNGGQ-WLFAKSLDTFCPLGPSVVM 193
I KK + +AM+ + D+Q ++ G W AKS D CP+G + +
Sbjct: 72 ISKKASRISKSDAMDYIGGYTVALDMTARDFQDEAKKAGAPWFLAKSFDGSCPIGGFLPV 131
Query: 194 KEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGV 253
+ N PHDV L CK+NG+ +Q + M+ IP ++ Y ++ TL GDV+LTGTPAGV
Sbjct: 132 SDIPN-PHDVELFCKINGKDQQRCRTDVMIFDIPTLLEYTTQFFTLEVGDVVLTGTPAGV 190
>sp|P53889|FMP41_YEAST Uncharacterized mitochondrial hydrolase FMP41 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FMP41 PE=1
SV=1
Length = 259
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 42/215 (19%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFS----EVTCPTNVT-------- 131
KI+CI NY H E N + P+ PFFF K S+IV P S + T P N T
Sbjct: 11 KIICIGRNYAAHIKELNNSTPKQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDG 70
Query: 132 -----------RYLDWEVELAVIIGKKTRDV---KPHEAMESV----------FESDWQK 167
+ E+ELA+I+ K +V KP E +S+ + +
Sbjct: 71 TNPGPIFIPRGVKVHHEIELALIVSKHLSNVTKMKPEEVYDSISGVALALDLTARNVQDE 130
Query: 168 SSRNGGQWLFAKSLDTFCPLGPSVVMKE----YLNDPHDV-TLTCKVNGQVKQNASSSNM 222
+ + G W +K DTF P+ ++V +E Y ++ D+ + C VNGQ++Q+ ++ M
Sbjct: 131 AKKKGLPWTISKGFDTFMPIS-AIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLM 189
Query: 223 LHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFR 257
LH + +I+ ++S MI+L PGD+ILTGTPAGVG +
Sbjct: 190 LHPLHKILQHISTMISLEPGDIILTGTPAGVGELK 224
>sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum
GN=fahd1 PE=3 SV=1
Length = 218
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNV---TRYLDWEVEL 140
KI+ + NY H E P PFFF K S+ + + T P + + + EVEL
Sbjct: 10 KIVAVGRNYAQHAKELGNEIPSEPFFFLKPTSSYL---LQGTGPIEIPLESSDIHHEVEL 66
Query: 141 AVIIGKKTRDVKPHEAMESV--FESDWQKSSRNGGQ--------WLFAKSLDTFCPLGPS 190
++IGKK RD+ AM+ V + +SR+ W +K DTFCP+
Sbjct: 67 GIVIGKKGRDIDLKSAMDYVSGYTLALDMTSRDQQSIAKAKSLPWTVSKGYDTFCPIS-G 125
Query: 191 VVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250
+ K+ + D ++V L C V+GQ+KQ +++ M+ +P ++ Y+S ++TL GD+ILTGTP
Sbjct: 126 FIPKDKIKDLNNVELWCSVDGQIKQKGNTNQMIFDVPHLIQYISSIMTLESGDLILTGTP 185
Query: 251 AGVG 254
+GVG
Sbjct: 186 SGVG 189
>sp|P76004|YCGM_ECOLI Uncharacterized protein YcgM OS=Escherichia coli (strain K12)
GN=ycgM PE=1 SV=1
Length = 219
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 84 KILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVI 143
K++C+ NY H E PE P F K + + + P++ + EVELAV+
Sbjct: 18 KVVCVGSNYAKHIKEMGSAVPEEPVLFIKPETALCDLRQPLAIPSDFGS-VHHEVELAVL 76
Query: 144 IGKKTRDVKPHEAMESVFE---------SDWQKSSRNGGQ-WLFAKSLDTFCPLGPSVVM 193
IG R +++ D Q + GQ W AK+ D CPL +
Sbjct: 77 IGATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPA 136
Query: 194 KEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGV 253
E+ DP + TL+ VNG+ +Q ++++M+HKI +++Y+S+ TL GDV+LTGTP GV
Sbjct: 137 AEFTGDPQNTTLSLSVNGEQRQQGTTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGV 196
Query: 254 G 254
G
Sbjct: 197 G 197
>sp|O86042|NAGK_RALSP Fumarylpyruvate hydrolase OS=Ralstonia sp. GN=nagK PE=1 SV=1
Length = 192
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 105 ETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF--- 161
E F+F K P T+V + V P + Y +E+EL + IGK V +A E ++
Sbjct: 10 EQAFYFTKSPQTLVESGATVAYPPRTSNY-HYEMELVLAIGKPGFRVSEDQAHELIYGYA 68
Query: 162 ------ESDWQKSSRNGGQ-WLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVK 214
D Q +R+ G+ W K ++ V M+ + + + L +VNGQ K
Sbjct: 69 AGLDMTRRDLQLVARDKGRPWDTGKDIEEGSVCSEIVPMQGVVVEQGAIAL--EVNGQTK 126
Query: 215 QNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGV 255
Q+++ ++ + EI++ LS L PGD+I TGTP GVG
Sbjct: 127 QSSNVDKLIWNVREIIADLSTYYHLQPGDLIYTGTPEGVGA 167
>sp|Q8UIC9|TRUA_AGRT5 tRNA pseudouridine synthase A OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=truA PE=3 SV=1
Length = 266
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 3 FVQYKPLNGNGNTPQRLGVQLE--RNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
F ++ ++ N+P R +L+ RNG++I + + S +N ++ G +L +
Sbjct: 156 FTTFRSVHCQANSPVRTLDRLDVTRNGDLIEIRATAQSFLHNQIRSFAGTLKLAGEGGMT 215
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKD 94
+ + ++ + + P+ PD + + ++Y D
Sbjct: 216 PDDVRAALEARDRKACGPVAPPDGLYFMQVDYPD 249
>sp|B5ZN21|TRUA_RHILW tRNA pseudouridine synthase A OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=truA PE=3 SV=1
Length = 268
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 3 FVQYKPLNGNGNTPQRLGVQLE--RNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
F ++ + N+P R +L+ R+GE+I + + S +N ++ G +L + K
Sbjct: 156 FSTFRAAHCQANSPVRTLDRLDVTRSGELIEIRATAQSFLHNQIRSFAGTLKLAGEGKWT 215
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKD 94
+ + ++ + + P+ PD + + ++Y D
Sbjct: 216 PDDVEAALEARDRKACGPVAPPDGLYFLQVDYPD 249
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,329,399
Number of Sequences: 539616
Number of extensions: 4413379
Number of successful extensions: 9996
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9830
Number of HSP's gapped (non-prelim): 58
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)