Query psy5683
Match_columns 264
No_of_seqs 221 out of 1435
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 23:59:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5683.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5683hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r6o_A 2-hydroxyhepta-2,4-dien 100.0 7.2E-66 2.5E-70 471.4 20.3 256 1-264 24-299 (329)
2 4dbf_A 2-hydroxyhepta-2,4-dien 100.0 3.1E-63 1.1E-67 447.2 15.3 229 1-260 21-269 (288)
3 3rr6_A Putative uncharacterize 100.0 1E-62 3.5E-67 439.7 13.0 226 1-260 5-244 (265)
4 3lzk_A Fumarylacetoacetate hyd 100.0 8.6E-61 3E-65 443.0 21.6 240 1-253 22-289 (359)
5 1wzo_A HPCE; structural genomi 100.0 2.2E-58 7.6E-63 408.8 20.3 217 1-260 1-226 (246)
6 3l53_A Putative fumarylacetoac 100.0 2.7E-58 9.1E-63 402.9 14.2 188 71-260 3-203 (224)
7 2dfu_A Probable 2-hydroxyhepta 100.0 3E-57 1E-61 405.1 17.7 218 1-260 1-240 (264)
8 3s52_A Putative fumarylacetoac 100.0 2.7E-55 9.4E-60 383.2 13.5 188 68-260 8-205 (221)
9 2q18_X 2-keto-3-deoxy-D-arabin 100.0 2.3E-54 8E-59 391.9 8.3 236 1-257 1-267 (293)
10 1gtt_A 4-hydroxyphenylacetate 100.0 6E-52 2.1E-56 393.8 14.2 188 67-260 209-406 (429)
11 1saw_A Hypothetical protein FL 100.0 3.9E-52 1.3E-56 364.2 11.9 180 79-260 15-204 (225)
12 1hyo_A Fumarylacetoacetate hyd 100.0 1.8E-50 6E-55 381.2 19.0 246 1-255 19-358 (421)
13 1nkq_A Hypothetical 28.8 kDa p 100.0 8.7E-51 3E-55 362.2 10.1 182 76-260 3-227 (259)
14 1gtt_A 4-hydroxyphenylacetate 100.0 6.5E-48 2.2E-52 366.1 17.3 168 82-259 2-186 (429)
15 2wqt_A 2-keto-4-pentenoate hyd 100.0 1.7E-40 5.7E-45 297.8 11.0 173 79-260 51-244 (270)
16 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 100.0 1.5E-40 5.2E-45 297.6 7.4 174 81-260 53-250 (267)
17 2kl0_A Putative thiamin biosyn 59.6 9.3 0.00032 26.4 3.6 46 205-255 1-66 (73)
18 2k5p_A THis protein, thiamine- 49.6 25 0.00085 24.5 4.5 48 205-256 1-71 (78)
19 1f0z_A THis protein; ubiquitin 48.1 12 0.0004 25.0 2.5 42 206-251 2-63 (66)
20 1tyg_B YJBS; alpha beta barrel 45.1 15 0.00053 26.3 2.9 48 202-252 18-85 (87)
21 2cu3_A Unknown function protei 41.4 33 0.0011 22.5 4.0 41 207-252 2-62 (64)
22 1ryj_A Unknown; beta/alpha pro 37.2 18 0.0006 24.5 2.1 44 205-252 5-68 (70)
23 1gxc_A CHK2, CDS1, serine/thre 34.1 15 0.00052 28.7 1.5 29 207-252 105-133 (149)
24 4ejq_A Kinesin-like protein KI 29.1 28 0.00097 27.3 2.3 24 207-249 112-135 (154)
25 3fm8_A Kinesin-like protein KI 28.3 26 0.00089 26.7 1.9 25 206-249 91-115 (124)
26 2pie_A E3 ubiquitin-protein li 27.5 30 0.001 26.5 2.1 16 235-250 88-103 (138)
27 3hx1_A SLR1951 protein; P74513 27.1 39 0.0013 25.7 2.8 24 207-250 84-107 (131)
28 4egx_A Kinesin-like protein KI 25.5 35 0.0012 27.8 2.3 25 206-249 141-165 (184)
29 4h87_A Kanadaptin; FHA domain 25.5 34 0.0012 26.1 2.1 26 207-249 96-121 (130)
30 3els_A PRE-mRNA leakage protei 25.4 25 0.00085 27.9 1.4 28 207-251 119-146 (158)
31 3elv_A PRE-mRNA leakage protei 25.4 32 0.0011 28.7 2.0 17 235-251 177-193 (205)
32 2d99_A Muscle, general transcr 23.7 44 0.0015 24.2 2.3 25 237-262 37-61 (90)
33 1wln_A Afadin; beta sandwich, 23.3 29 0.00098 25.9 1.3 15 235-249 91-105 (120)
34 1g6g_A Protein kinase RAD53; b 23.1 36 0.0012 25.6 1.8 17 235-251 92-108 (127)
35 3gqs_A Adenylate cyclase-like 21.4 22 0.00077 25.8 0.3 13 237-249 82-94 (106)
36 3bid_A UPF0339 protein NMB1088 21.2 1.1E+02 0.0039 20.4 3.9 26 1-30 1-26 (64)
37 3po8_A RV0020C protein, putati 20.8 39 0.0013 24.1 1.5 13 237-249 77-89 (100)
38 2eje_A General transcription f 20.7 55 0.0019 24.6 2.3 25 237-262 51-75 (114)
39 1g3g_A Protien kinase SPK1; FH 20.3 49 0.0017 26.1 2.2 27 207-250 109-135 (164)
No 1
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=100.00 E-value=7.2e-66 Score=471.42 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=206.9
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCCCCCc---ccHHHHHhCCcHHHHHHHHHHhh-ccccccCCCcEEc
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMP---NNLVQFLEGGPELLEKAKRMVSE-CKCMVKLSEVELL 76 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~~~~p---~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~v~ll 76 (264)
|||+||...+ ..+.|++..+ +.++||+....... .....+++.+++....+++.+.. ....+++++++|+
T Consensus 24 ~~l~~~~~~~-----~~~~~~~~~~-~~~~dl~~~~~~~~~~~~~~~~l~~~ld~~~~~l~~~l~~~~~~~~~~~~v~ll 97 (329)
T 3r6o_A 24 LRIVSFAGAD-----QWQPGVLIDD-DTVAPLAPMLARHDIQVSSARELIALLPQISPLISDELAGGSFEPVPLDSVALG 97 (329)
T ss_dssp CEEEEBC---------CCEEEEEET-TEEEECSCC---------CHHHHHTTHHHHHHHHHHTC-------CBGGGSCBC
T ss_pred EEEEEEccCC-----CccceEEecC-CEEEEchhhhccccccccchhhHHHHHHHHHHHHHHHHhcCCCCCccCccceEc
Confidence 7899998764 3677877643 69999997643221 23444555554433334433332 2235799999999
Q ss_pred CCCccCCeEEEEecCcHHHHHHhCCCCCC--CCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCChh
Q psy5683 77 PPITRPDKILCIALNYKDHCDEQNKTYPE--TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPH 154 (264)
Q Consensus 77 ~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~--~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~~ 154 (264)
+|+++|+||||+|+||.+|++ ++.+.|+ +|++|+|+++++++++++|.+|.. +.++|||+||||||||.+++|+++
T Consensus 98 aPv~~p~kI~cvG~NY~~H~~-~g~~~P~~~~P~~F~K~~~s~~g~~~~I~~P~~-~~~~d~E~ELavVIGk~~~~v~~e 175 (329)
T 3r6o_A 98 APIPEPGQVIALGFNYPTHSD-TDSPLPKMADPVVFMKSPTSISGPRDAVIAPRT-SHALDYEIEIAVVIGKPGYRIERS 175 (329)
T ss_dssp CSSSSCSCEEEEESCSTTC------------CCEEEEECGGGEECTTCCEEECTT-CSCEECCEEEEEEECSCBSSCCGG
T ss_pred CCCCCCCeEEEEcccHHHHHH-hCCCCCCccCCEEEEcccceEECCCCceECCCC-CCCccEEEEEEEEECCCCCCCCHH
Confidence 999999999999999999999 8888898 999999999999999999999998 899999999999999999999999
Q ss_pred hHhhhhh---------hhhcccc-----cccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEecccc
Q psy5683 155 EAMESVF---------ESDWQKS-----SRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSS 220 (264)
Q Consensus 155 ~A~~~i~---------ard~q~~-----~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~ 220 (264)
+|++||+ +||||.. +..+.+|.+||+||+|||+|||+||+||++|+.+|+|+++||||++|+++|+
T Consensus 176 ~A~~~I~Gytv~NDvSaRd~q~~~g~~~~~~~~~w~~aK~fd~~~plGP~ivt~del~d~~~l~l~l~vNGe~~q~g~t~ 255 (329)
T 3r6o_A 176 QAIKHVAGYMLANDITARDVALPFGFGGSPLQAQVVRGKGYPTFCPTGPWLFTTGSDTTFETFDFELRINGELRQSGSTV 255 (329)
T ss_dssp GGGGGEEEEEEEECCEEHHHHCTTC------CCCHHHHHCSTTSEEBCSCEEECTTCSSCCCCEEEEEETTEEEEEEEGG
T ss_pred HHHhhheEEEEEEEeEHHHHhhhhcccccccCCccccccCcCcCcccCCeEcChhhcCChhhcEEEEEECCEEEEecCHH
Confidence 9999999 8999761 0126789999999999999999999999999999999999999999999999
Q ss_pred ccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCCCCCC
Q psy5683 221 NMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264 (264)
Q Consensus 221 ~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~~~L~ 264 (264)
+|+|++++||+|+|+++||+|||||+||||+|||..++|++|||
T Consensus 256 dMif~~~~lIa~lS~~~tL~pGDvI~TGTp~GvG~~~~p~~~l~ 299 (329)
T 3r6o_A 256 DMTLGFAEVVETVSATIALRAGDIILTGTPGGCGFQFDPPRYLR 299 (329)
T ss_dssp GCSSCHHHHHHHHHTTSCBCTTCEEECCCCSCCGGGSSSCCCCC
T ss_pred HhcCCHHHHHHHHHcCCCcCCCCEEEcCCccccCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999986
No 2
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=100.00 E-value=3.1e-63 Score=447.21 Aligned_cols=229 Identities=31% Similarity=0.472 Sum_probs=194.7
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCC-----EEEECCCCCCCCcccHHHHHhCCcHHHHHHHHHHhhccccccCCCcEE
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNG-----EIINLSSVDSSMPNNLVQFLEGGPELLEKAKRMVSECKCMVKLSEVEL 75 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~-----~v~~l~~~~~~~p~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l 75 (264)
|||+||..++ ..++|++.+++. .+..+++.. +... ...+..+++++++|
T Consensus 21 Mr~~rf~~~~-----~~~~g~~~~~~~~~~~~~~~~~~g~~----------~~~~-----------~~~g~~~~~~~v~l 74 (288)
T 4dbf_A 21 MRFGRIATPD-----GMCFCSIEGEGDDVANLTAREIEGTP----------FTEP-----------KFTGREWPLKDVRL 74 (288)
T ss_dssp CEEEEEEETT-----EEEEEEEESSSSCGGGCEEEEESSCT----------TSSC-----------CEEEEEEEGGGSEE
T ss_pred eEEEEEEECC-----EEEEEEEeCCcccccccEEEEecCCc----------cccc-----------ccCCceeecccCeE
Confidence 9999999864 499999976532 455555420 0111 11234689999999
Q ss_pred cCCCccCCeEEEEecCcHHHHHHhC--CCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCCh
Q psy5683 76 LPPITRPDKILCIALNYKDHCDEQN--KTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKP 153 (264)
Q Consensus 76 l~Pv~~p~ki~~~g~Ny~~h~~e~~--~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~ 153 (264)
++|++ |+||||+|+||++|++|++ .+.|++|.+|+|+++++++++++|.+|.. +.++|||+|||+||||.+++|++
T Consensus 75 l~Pv~-p~ki~cvG~NY~~H~~E~~~~~~~p~~P~~F~K~~~sv~g~~~~I~~P~~-~~~~d~E~ELavVIGk~~~~v~~ 152 (288)
T 4dbf_A 75 LAPML-PSKVVAIGRNYADHVAEVFKKSAESLPPTLFLKPPTAVTGPESPIRIPSF-ATKVEFEGELAVVIGKPCKNVKA 152 (288)
T ss_dssp ECSCC-CSCEEEEESCBCC-----------CCCCEEEEECGGGEECTTCCEEECTT-CCSEECCEEEEEEECSCBSSCCG
T ss_pred cCCCC-CceEEEEeccHHHHHHHhccCCCCCCCCEEEEeCcceeeCCCCceECCCC-CCceeEEEEEEEEECCCcCCCCH
Confidence 99997 8999999999999999999 88899999999999999999999999998 89999999999999999999999
Q ss_pred hhHhhhhh---------hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECC----EEEEecccc
Q psy5683 154 HEAMESVF---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNG----QVKQNASSS 220 (264)
Q Consensus 154 ~~A~~~i~---------ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNG----e~~q~~~t~ 220 (264)
++|++||+ +||||. .+.+|.+||+||+|||+|||++|..++.|+.+++|+++||| |++|+++|+
T Consensus 153 ~~A~~~I~Gytv~nDvsaRd~Q~---~~~~w~~aK~fd~~~plGP~ivt~~~~~d~~~l~i~~~vNG~~~~e~~Q~~~t~ 229 (288)
T 4dbf_A 153 DDWKSVVLGFTIINDVSSRDLQF---ADGQWARAKGIDTFGPIGPWIETDINSIDLDNLPIKARLTHDGETQLKQDSNSN 229 (288)
T ss_dssp GGGGGGEEEEEEEECCEEHHHHH---HHSSSHHHHHSTTCEEEEEEEECCGGGSCTTSCEEEEEEEETTEEEEEEEEEGG
T ss_pred HHHhhheeEEEEEEEeEhHHhhh---ccCCccccccCCCCceeCCccccccccCCccccEEEEEEcCCcceEEEEecCHH
Confidence 99999999 999997 45799999999999999999999876678999999999999 999999999
Q ss_pred ccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 221 NMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 221 ~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
+|+|++++||+|+|+++||+|||||+||||+|+|..+..+
T Consensus 230 ~mi~~~~~lIa~lS~~~tL~pGDvI~TGTP~Gvg~l~~GD 269 (288)
T 4dbf_A 230 QMIMKMGEIIEFITASMTLLPGDVIATGSPAGTEAMVDGD 269 (288)
T ss_dssp GBSSCHHHHHHHHHTTSCBCTTCEEECCCCSCCCBCCTTC
T ss_pred HhcCCHHHHHHHHhCCCCcCCCCEEEcCCCCCCeecCCCC
Confidence 9999999999999999999999999999999999876543
No 3
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A
Probab=100.00 E-value=1e-62 Score=439.70 Aligned_cols=226 Identities=36% Similarity=0.575 Sum_probs=199.0
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCC-----EEEECCCCCCCCcccHHHHHhCCcHHHHHHHHHHhhccccccCCCcEE
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNG-----EIINLSSVDSSMPNNLVQFLEGGPELLEKAKRMVSECKCMVKLSEVEL 75 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~-----~v~~l~~~~~~~p~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l 75 (264)
||++||..++ ..++|++.+++. .+..+.+.. +... ...+..+++++++|
T Consensus 5 mk~~r~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~-----------~~~~~~~~~~~v~l 58 (265)
T 3rr6_A 5 MRLGRIASPD-----GVAFVSIEGEDGREESAIAREIAEHP----------FGTP-----------TFTGRQWPLADVRL 58 (265)
T ss_dssp CEEEEEEETT-----EEEEEEEEC-------CEEEEECSCT----------TSSC-----------CEEEEEEEGGGSEE
T ss_pred EEEEEEEECC-----EEEEEEEeCCCcccccceEEEecCCc----------cccc-----------ccCCcEeecccCeE
Confidence 9999999864 499999976532 344454310 0011 11234689999999
Q ss_pred cCCCccCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCChhh
Q psy5683 76 LPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHE 155 (264)
Q Consensus 76 l~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~~~ 155 (264)
++|+. |+||+|+|+||++|++|++.+.|++|.+|+|+++++++++++|.+|.. +.++|||+|||+||||.+++|++++
T Consensus 59 l~P~~-p~ki~cvG~NY~~h~~e~g~~~P~~P~~F~K~~~s~~g~~~~I~~P~~-~~~~d~E~ELavVIGk~~~~v~~~~ 136 (265)
T 3rr6_A 59 LAPIL-ASKVVAMGKNYAAHAAEMGGDPPESPVIFIKPNTSIIGPGLPIQLPPS-ATEVHHEGELAIVIGRPCKDVPAAR 136 (265)
T ss_dssp CCSSC-CSCEEEESCCBCSSGGGTTSSCCCCCCEEEECGGGEECTTSCEECCTT-CSCEEECEEEEEEECSCBSSCCGGG
T ss_pred cCCCC-CceEEEEEcCHHHHHHHhCCCCCCCCEEEEeCcceEeCCCCceECCCC-CCceeEEEEEEEEECCcCCCCCHHH
Confidence 99997 899999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred Hhhhhh---------hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEeccccccccCh
Q psy5683 156 AMESVF---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKI 226 (264)
Q Consensus 156 A~~~i~---------ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~~m~~~~ 226 (264)
|++||+ +||||. .+.+|.++|+||+|||+|||++|. + |+.+++|+++||||++|+++|++|+|++
T Consensus 137 A~~~V~Gyt~~nDvsaRd~q~---~~~~w~~aK~fd~~~plGP~ivt~--~-d~~~l~i~~~vNGe~~q~g~t~~mi~~~ 210 (265)
T 3rr6_A 137 AAENILGYTIGNDVSARDHQR---ADGQWTRAKGHDTFCPLGPWIVTD--L-DPADLEIRTEVNGQVRQRSRTSLLLHDV 210 (265)
T ss_dssp TGGGEEEEEEEECCEEHHHHH---HHSSSHHHHHSTTCEEEEEEEESS--C-CGGGCEEEEEETTEEEEEEEGGGBSSCH
T ss_pred HHhheeEEEEEEEeEhHHhhh---ccCCcceecccCCCcccCCcCcCC--C-CcccCEEEEEECCEEEEEECHHhhcCCH
Confidence 999999 899997 467999999999999999999984 6 8999999999999999999999999999
Q ss_pred HHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 227 PEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 227 ~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
+++|+|+|+++||+|||||+||||+|+|..+..+
T Consensus 211 ~~lIa~lS~~~tL~pGDvI~TGTp~Gvg~l~~GD 244 (265)
T 3rr6_A 211 GAIVEWVSAVMTLLPGDVILTGTPEGVGPIVDGD 244 (265)
T ss_dssp HHHHHHHHHHSCBCTTCEEECCCCSCCEECCTTC
T ss_pred HHHHHHHhcCCCcCCCCEEEeCCCCCceeCCCCC
Confidence 9999999999999999999999999999766443
No 4
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.6e-61 Score=443.04 Aligned_cols=240 Identities=17% Similarity=0.221 Sum_probs=210.1
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCCCCCcccHHHHHhCCcHHHH---HHHHHHhhcc-ccccCCCcEEc
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLE---KAKRMVSECK-CMVKLSEVELL 76 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~~~~p~~l~~~l~~~~~~~~---~~~~~~~~~~-~~~~~~~v~ll 76 (264)
|||++|+..+ ...++++|..|...++++.. ++++|+++|+.|++... .+.+.+..+. ..+++++++|+
T Consensus 22 MKlat~~~~~----~~g~l~vvs~Dl~~~~~~~~----~~~~l~~~l~~w~~~~~~l~~l~~~l~~~~~~~~~~~~v~ll 93 (359)
T 3lzk_A 22 MKLATLKDST----RDGKLVVVSKDLTRCSEVGH----IARTLQAALDDWAHAGPRLERVAEGIETGAQPTMRFHEHDAA 93 (359)
T ss_dssp CEEEEECCSS----SSCEEEEECTTSSEEEECTT----TCSSHHHHHHTHHHHHHHHHHHHHHHHHTCSCCEECCGGGBC
T ss_pred ceEEEEecCC----cccEEEEEeCcccccccccc----cCcCHHHHHhccHhhHHHHHHHHHHHhcCCCCCCcCccceEc
Confidence 9999999754 24688888877667887764 46899999999965443 3333333332 35689999999
Q ss_pred CCCccCCeEEEEecCcHHHHHHh----CCCCCC----CCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCC
Q psy5683 77 PPITRPDKILCIALNYKDHCDEQ----NKTYPE----TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKT 148 (264)
Q Consensus 77 ~Pv~~p~ki~~~g~Ny~~h~~e~----~~~~p~----~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~ 148 (264)
+|+++|. +||+|+||.+|++|+ +.+.|+ .|++|+|+++++++++++|.+|.. +..+|||+||||||||.+
T Consensus 94 ~Pv~~~~-~~~~g~NY~~Ha~e~~~~~g~~~p~~~~~~P~~F~k~~ssv~g~~~~I~~P~~-s~~lD~E~ELavVIGk~~ 171 (359)
T 3lzk_A 94 SPLPRAF-QWADGSAYVNHVELVRKARNAEMPASFWTDPLIYQGGSDSFLGPRDPILMADD-AWGIDMEGEAAVIVDDVP 171 (359)
T ss_dssp CSSSSCS-CEEEECCCHHHHHHHHHHTTCCCCGGGGTSCCEEEECCSSCBCTTSCEEESCT-TSCEECCEEEEEEECCBC
T ss_pred CCCCCCC-EEEEEcCHHHHHHHHHHhcCCCCCCcccCccEEEECCCceEECCCCCEECCCC-CCCeeEEEEEEEEECCCC
Confidence 9998774 589999999999996 677787 899999999999999999999998 999999999999999999
Q ss_pred CCCChhhHhhhhh---------hhhccccc-ccCCCceeccccCCCcccCCcccccccCCCC-----CceEEEEEECCEE
Q psy5683 149 RDVKPHEAMESVF---------ESDWQKSS-RNGGQWLFAKSLDTFCPLGPSVVMKEYLNDP-----HDVTLTCKVNGQV 213 (264)
Q Consensus 149 ~~i~~~~A~~~i~---------ard~q~~~-~~~~~~~~~K~~d~~~plGP~ivt~de~~d~-----~~l~i~~~vNGe~ 213 (264)
++|++++|++||+ +||+|.+. .++.+|++||+ ||++|||+||+||++|+ .+|+|+++||||+
T Consensus 172 ~~v~~e~A~~~I~Gytl~ND~SaRD~Q~~~~~~g~~~~~~K~---~~~~gP~iVt~del~~~~~~~~~~L~l~~~vNGe~ 248 (359)
T 3lzk_A 172 MGATLDEAKAAIRLVMLVNDVSLRGLIPGELAKGFGFYQSKP---SSAFSPVAVTPEELGEAWDGGKLHLPLHVDLNGEP 248 (359)
T ss_dssp TTCCHHHHHHTEEEEEEEECCEETTTHHHHHHHTSCCSTTSC---CCEECSCEECHHHHGGGBCSSCBCSBEEEEETTEE
T ss_pred CCCCHHHHHhhhcEEEEEEeccHHHhhhhhhccCCCcccccc---ccccCCccccHHHcCccccCCccceEEEEEECCEE
Confidence 9999999999999 99999742 24689999998 69999999999999776 6899999999999
Q ss_pred EEecc-ccccccChHHHHHHHHCCcccCCCCEEEcCCCCCC
Q psy5683 214 KQNAS-SSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGV 253 (264)
Q Consensus 214 ~q~~~-t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gv 253 (264)
+|++| |++|+|++++||+|+|+++||+|||||+||||+|+
T Consensus 249 ~q~~~~t~~Mif~~~~lIa~lS~~~tL~pGDvI~TGTpsGv 289 (359)
T 3lzk_A 249 FGRANAGIDMTFDFPQLIVHAARTRPLSAGTIIGSGTVSNK 289 (359)
T ss_dssp EECCBTTSSCSSCHHHHHHHHTTTSCBCTTEEEECCSCCCC
T ss_pred EEcCcCcccccCCHHHHHHHHhCCCCcCCCCEEEcCCcCCC
Confidence 99999 99999999999999999999999999999999999
No 5
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-58 Score=408.82 Aligned_cols=217 Identities=35% Similarity=0.565 Sum_probs=191.0
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCCCCCcccHHHHHhCCcHHHHHHHHHHhhccccccCCCcEEcCCCc
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRMVSECKCMVKLSEVELLPPIT 80 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~~~~p~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~Pv~ 80 (264)
|||+||+.++ ..++|++.+ +.+++.+ ...+++++++|++|+
T Consensus 1 m~~~~~~~~~-----~~~~g~~~~--~~~~~~~-------------------------------~~~~~~~~~~~l~P~- 41 (246)
T 1wzo_A 1 MKLARFLAKG-----RVHQGVYRE--GLLLDEA-------------------------------GEAHRPEDVTWLLPF- 41 (246)
T ss_dssp CEEEEEEETT-----EEEEEEEET--TEEECTT-------------------------------CCEECGGGSEECCSS-
T ss_pred CEEEEEEeCC-----EEEEEEEEC--CEEEeCC-------------------------------CCccccccCEEcCCC-
Confidence 9999999864 589999965 4566421 124688899999999
Q ss_pred cCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCChhhHhhhh
Q psy5683 81 RPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESV 160 (264)
Q Consensus 81 ~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~~~A~~~i 160 (264)
+|+||+|+|+||++|++|+|.+.|++|.+|+|+++++++++++|.+|.. +..+|||+|||+||||.++++++++|++||
T Consensus 42 ~p~~i~~vG~ny~~h~~e~g~~~P~~P~~f~k~~~~~~~~g~~i~~p~~-~~~~~~E~ELavvig~~~~~v~~~~a~~~i 120 (246)
T 1wzo_A 42 TPGKILGVALNYADHAEELGLSRPEEPALFWKPNTSLLPHKGVVLYPKG-ARFVHYEVELAVVVGRPMKRVRAKDALDYV 120 (246)
T ss_dssp CCCCEEEEESCBC------CCCCCSSCEEEEECGGGEECTTCCEEECTT-CSCEECCEEEEEEECSCBSSCCHHHHGGGE
T ss_pred CCCeEEEEEcChHHHHHHhCCCCCCCCEEEEECcccEeCCCCeEECCCC-CCceeEEEEEEEEECCCCCCCCHHHHHhhe
Confidence 7999999999999999999999999999999999999999999999998 889999999999999999999999999999
Q ss_pred h---------hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEeccccccccChHHHHH
Q psy5683 161 F---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231 (264)
Q Consensus 161 ~---------ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~~m~~~~~~lia 231 (264)
+ +||||. +...+|.++|+||+|||+|||++ .|+++|+.+++|+++||||++|++++++|+|+++++|+
T Consensus 121 ~g~~~~nD~s~rd~q~--~~~~~~~~~K~~d~~~~lGp~i~-~~~i~d~~~l~i~~~vNGe~~q~g~t~~mi~~~~~lia 197 (246)
T 1wzo_A 121 LGYTIANDLVARDYVT--NTFRPPIRAKGRDTFLPLGPFLV-VEEVEDPQDLWLRAYVNGELRQEGHTSRMLYSVAELLE 197 (246)
T ss_dssp EEEEEEECCEEGGGC------CCCHHHHCSTTCEEEEEEEE-CSCCSCTTSCEEEEEETTEEEEEEEGGGBSSCHHHHHH
T ss_pred eEEEEEEECchHHhcc--cccCCceeeccCCCCEEECCcCc-HHHcCCCcccEEEEEECCEEEEeeCHHHhCCCHHHHHH
Confidence 9 899997 22379999999999999999999 88998999999999999999999999999999999999
Q ss_pred HHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 232 YLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 232 ~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
|+|+++||+|||||+||||+|+|..+...
T Consensus 198 ~ls~~~tL~pGDvI~TGTp~gvg~l~~GD 226 (246)
T 1wzo_A 198 FISEFMTLEPYDVLLTGTPKGISQVRPGD 226 (246)
T ss_dssp HHHTTSCBCTTCEEECCCCCCSCEECTTC
T ss_pred HHhCCCCcCCCCEEEeCCCCCceECCCCC
Confidence 99999999999999999999999866543
No 6
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=100.00 E-value=2.7e-58 Score=402.86 Aligned_cols=188 Identities=35% Similarity=0.498 Sum_probs=176.4
Q ss_pred CCcEEcCCCccC-CeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCC
Q psy5683 71 SEVELLPPITRP-DKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTR 149 (264)
Q Consensus 71 ~~v~ll~Pv~~p-~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~ 149 (264)
+.|+|++|++.+ +||+|+|+||++|++|+|.+.|++|++|+|+++++++++++|.+|.. +.++|||+|||+||||+++
T Consensus 3 ~~~~~~~P~p~~~~ki~cvG~Ny~~h~~e~g~~~p~~P~~F~K~~~s~~~~g~~I~~P~~-~~~~d~E~ELavvIgk~~~ 81 (224)
T 3l53_A 3 ELILNQRPYPRDLGKIVCVGRNYAAHAKELNNPIPSSPILFIKPASSAVPFGPVFSIPKD-QGSVHHELEIAILIGKALS 81 (224)
T ss_dssp CCEETTEECSSCCCEEEEEECCSHHHHHHTTCCCCSSCEEEEEEGGGEEESCSEECCCSS-SSCEEECEEEEEEECSCBS
T ss_pred ccceecCCCCCCCCeEEEEccCHHHHHHHhCCCCCCCCEEEecCCceEECCCCeEecCCC-CCCcceEEEEEEEECCCCC
Confidence 568999999875 79999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred CCChhhHhhhhh---------hhhcccc-cccCCCceeccccCCCcccCCcccccc--cCCCCCceEEEEEECCEEEEec
Q psy5683 150 DVKPHEAMESVF---------ESDWQKS-SRNGGQWLFAKSLDTFCPLGPSVVMKE--YLNDPHDVTLTCKVNGQVKQNA 217 (264)
Q Consensus 150 ~i~~~~A~~~i~---------ard~q~~-~~~~~~~~~~K~~d~~~plGP~ivt~d--e~~d~~~l~i~~~vNGe~~q~~ 217 (264)
++++++|++||+ +||||.. +..+.+|.+||+||+|||+||| ++.| ++.|+.+++|+++||||++|++
T Consensus 82 ~i~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~g~~w~~aK~fd~~~plGp~-v~~~~~~~~d~~~l~i~l~vNGe~~q~g 160 (224)
T 3l53_A 82 RASTEQVAESIAGIGLGLDLTLRDVQDQLKEKGHPWERAKSFDGACPLTEF-VAVNLASEDEWQAIGLTLEKNGQFQQQG 160 (224)
T ss_dssp SCCHHHHHHHEEEEEEEECCEEHHHHHHHHHTTCCSHHHHSSTTSEEECCB-BCCCCSSGGGGGGEEEEEEETTEEEEEE
T ss_pred CCCHHHHHhhccEEEEEEEeEhHHhhhhhhhcCCCcceeeccCCCcccCCc-EeCchhhcCChhccEEEEEECCEEEEEE
Confidence 999999999999 8999973 2357889999999999999996 5788 8889999999999999999999
Q ss_pred cccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 218 SSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 218 ~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
+|++|+|+++++|+|+|+++||+|||||+||||+|+|..+..+
T Consensus 161 ~t~~mi~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~l~~GD 203 (224)
T 3l53_A 161 SSAEMLFPILPLIAHMSEHFSLQPGDVILTGTPAGVGPLEVGD 203 (224)
T ss_dssp EGGGCSSCHHHHHHHHHHHSCBCTTCEEECCCCSCCEECCTTC
T ss_pred cHHHhcCCHHHHHHHHHCCCCcCCCCEEEcCCCCCCEEcCCCC
Confidence 9999999999999999999999999999999999999876544
No 7
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=100.00 E-value=3e-57 Score=405.13 Aligned_cols=218 Identities=38% Similarity=0.633 Sum_probs=188.2
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCCCCCcccHHHHHhCCcHHHHHHHHHHhhccccccCCCcEEcCCCc
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRMVSECKCMVKLSEVELLPPIT 80 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~~~~p~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~Pv~ 80 (264)
|||+||.. + ++|++.+ +.++++++. .+. .....+++++++|++|+
T Consensus 1 m~~~~~~~------g--~~g~~~~--~~~~~~~~~-------------~~~-----------~~~~~~~~~~~~ll~P~- 45 (264)
T 2dfu_A 1 MKILRFNE------G--RWGVLEG--ELVLETDGP-------------GGN-----------PTGRRYDLASVTLLPPA- 45 (264)
T ss_dssp CEEEEETT------T--EEEEEET--TEEEEESST-------------TCC-----------EEEEEEEGGGSCEECSC-
T ss_pred CeEEEEcC------C--CEEEEEC--CEEEECCCc-------------ccc-----------ccCCccccccCeEcCCc-
Confidence 99999974 2 7999965 578888652 010 11235789999999999
Q ss_pred cCCeEEEEecCcHHHHHHhC----CCCCCCCEEEecCCCceecCC---------CeeecCCCCcCCceeeeEEEEEEcCC
Q psy5683 81 RPDKILCIALNYKDHCDEQN----KTYPETPFFFNKFPSTIVGPF---------SEVTCPTNVTRYLDWEVELAVIIGKK 147 (264)
Q Consensus 81 ~p~ki~~~g~Ny~~h~~e~~----~~~p~~P~~F~K~~~s~~g~g---------~~I~~P~~~~~~~d~E~ELavVIgk~ 147 (264)
.|+||+|+|+||++|++|++ .+.|+.|.+|+|+++++++++ ++|.+|.. +.++|||+|||+||||.
T Consensus 46 ~p~~i~~~g~Ny~~H~~e~~~~~~~~~p~~P~~f~k~~~s~~~~~~~~rp~g~~~~i~~p~~-~~~~d~E~ELavvig~~ 124 (264)
T 2dfu_A 46 TPTKIVCVGRNYREHIREMGHDFGEDLPKEPGLFLKGPNALARPGNPRDPWGTAEPVPYPFF-TEELHYEGELAVVVGDR 124 (264)
T ss_dssp CCSCEEEECSCBC-------------CCSSCCEEEECGGGEECCCBTTBHHHHSCCEEECSS-CSCEECCEEEEEEECSC
T ss_pred cCCeEEEEeCcHHHHHHHhcccccCCCCCCCEEEEeccceEEccCCcccccCCCcceecCCC-CCceeEEEEEEEEECCC
Confidence 59999999999999999998 778999999999999999999 99999998 88999999999999999
Q ss_pred CCCCChhhHhhhhh---------hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEecc
Q psy5683 148 TRDVKPHEAMESVF---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNAS 218 (264)
Q Consensus 148 ~~~i~~~~A~~~i~---------ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~ 218 (264)
++++++++|++||+ +||||. ...+|.+||+||+|||+|||+++ ++ |+.+++|+++||||++|+++
T Consensus 125 ~~~v~~~~a~~~I~gy~~~nDvt~Rd~q~---~~~~~~~aK~~d~~~plGp~i~~--~~-d~~~l~i~~~vNGe~~q~g~ 198 (264)
T 2dfu_A 125 MRHVPPEKALDHVLGYTVAVDITARDVQK---KDLQWVRAKSADKFLPLGPWLET--DL-NPQDTWVRTYVNGTLRQEGH 198 (264)
T ss_dssp BSSCCHHHHGGGEEEEEEEECCEEHHHHH---HSSSSHHHHCSTTCEEEEEEEES--SC-CTTSCEEEEEETTEEEEEEE
T ss_pred CCCCCHHHHHHHhhEeEEEEEeEhhhhhh---ccCCCceeecCCCCEEECCcCcc--cc-CCCccEEEEEECCEEEEEec
Confidence 99999999999998 899997 45799999999999999999998 57 89999999999999999999
Q ss_pred ccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 219 SSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 219 t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
|++|+|+++++|+|+|+++||+|||||+||||+|+|..+.-+
T Consensus 199 t~~mi~~~~~lia~ls~~~tL~pGDvI~TGTp~Gvg~l~~GD 240 (264)
T 2dfu_A 199 TSQMIFSVAEILSYISTFMTLEPLDVVLTGTPEGVGALRPGD 240 (264)
T ss_dssp GGGBSSCHHHHHHHHHTTSCBCTTCEEECCCCSCCCBCCTTC
T ss_pred HHHhhcCHHHHHHHHhcCCCcCCCCEEEeCCCCCccccCCCC
Confidence 999999999999999999999999999999999999876544
No 8
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=100.00 E-value=2.7e-55 Score=383.23 Aligned_cols=188 Identities=27% Similarity=0.485 Sum_probs=171.7
Q ss_pred ccCCCcEEcCCCccCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCC
Q psy5683 68 VKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKK 147 (264)
Q Consensus 68 ~~~~~v~ll~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~ 147 (264)
++...-.+..| ++||||+|+||++|++|+|.+.|++|.+|+|+++++++++++|.+|.. +.++|||+|||+||||+
T Consensus 8 ~~~~~~~~~~p---~~ki~~vG~Ny~~h~~e~g~~~p~~P~~F~K~~~~~~~~g~~i~~p~~-~~~~d~E~ELavvig~~ 83 (221)
T 3s52_A 8 RDWQGALLDFP---VNKVVCVGSNYAEHIKEMGSTASVEPVLFIKPETALCDIRQPVSIPKD-FGSVHHEIELAVLIGTP 83 (221)
T ss_dssp BBTTSCBCCSC---CCEEEEEESCBHHHHHHTTCCCCSSCEEEEEEGGGEEETTSCBCCCSS-SSCEEECEEEEEEECSC
T ss_pred EeeCCCcccCC---CCcEEEEeCCHHHHHHHhCCCCCCceEEEEcCCceEeCCCCeEECCCC-CCCccEEEEEEEEECCC
Confidence 44444444444 479999999999999999999999999999999999999999999998 88999999999999999
Q ss_pred CCCCChhhHhhhhh---------hhhcccc-cccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEec
Q psy5683 148 TRDVKPHEAMESVF---------ESDWQKS-SRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNA 217 (264)
Q Consensus 148 ~~~i~~~~A~~~i~---------ard~q~~-~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~ 217 (264)
++++++++|++||+ +||||.. +..+.+|.+||+||+|||+|||+ +.++++|+.+++|+++||||++|++
T Consensus 84 ~~~v~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~~~~~~~aK~~d~~~plGp~i-~~~~~~d~~~l~i~l~vNGe~~q~g 162 (221)
T 3s52_A 84 LKQASEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKAFDGSCPISGFI-PVAEFGDAQQADLSLTINGEIRQQG 162 (221)
T ss_dssp BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHHTCCSHHHHSSTTCEEECCBE-EHHHHCCGGGCEEEEEETTEEEEEE
T ss_pred CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhhccCCCcceeecCCCCccccCce-ehhhcCCccceEEEEEECCEEEEEE
Confidence 99999999999999 8999972 23478999999999999999998 5788889999999999999999999
Q ss_pred cccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 218 SSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 218 ~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
++++|+|+++++|+|+|+++||+|||||+||||+|+|..+..+
T Consensus 163 ~t~~mi~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~l~~GD 205 (221)
T 3s52_A 163 NTRDMITPIIPLISYMSRFFTLRAGDIVLTGTPQGVGPMQSGD 205 (221)
T ss_dssp EGGGBSSCHHHHHHHHHHHSCBCTTCEEECCCCSCCEEECTTC
T ss_pred cHHHccCCHHHHHHHHhCCCCcCCCCEEEeCCCCcceecCCCC
Confidence 9999999999999999999999999999999999999866543
No 9
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=100.00 E-value=2.3e-54 Score=391.92 Aligned_cols=236 Identities=19% Similarity=0.280 Sum_probs=187.3
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCC---CCCcccHHHHHhCCcHHHHHHHHHHhhccccccCCCcEEcC
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVD---SSMPNNLVQFLEGGPELLEKAKRMVSECKCMVKLSEVELLP 77 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~---~~~p~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~ 77 (264)
|||+||+..+ +..++|++.+ +.+++|+... ...+.+|.++|+.+...++ ++.. ...+++++++|++
T Consensus 1 Mkl~~~~~~~----g~~~~gvv~~--~~v~~l~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~----~~~~~~~~v~ll~ 69 (293)
T 2q18_X 1 MKLFRVVKRG----YYISYAILDN--STIIRLDEDPIKALMRYSENKEVLGDRVTGID-YQSL----LKSFQINDIRITK 69 (293)
T ss_dssp CEEEEEEETT----EEEEEEECTT--SCEEEESSCHHHHHHHHHHHCCCCEEEESSCC-HHHH----HHHSEETTEEECC
T ss_pred CEEEEEEeCC----CCEEEEEEEC--CEEEECccccccccccCcCHHHHHhCChhhhh-Hhhc----CCCCCcccceEeC
Confidence 9999999742 3589999954 4699997521 0113567777776532221 2111 1246889999999
Q ss_pred CCccCCeEEEEecCcHH----HHHHhC-----CC------CCCCCEEEecC-CCceecCCCeeecCCCCcCCceeeeEEE
Q psy5683 78 PITRPDKILCIALNYKD----HCDEQN-----KT------YPETPFFFNKF-PSTIVGPFSEVTCPTNVTRYLDWEVELA 141 (264)
Q Consensus 78 Pv~~p~ki~~~g~Ny~~----h~~e~~-----~~------~p~~P~~F~K~-~~s~~g~g~~I~~P~~~~~~~d~E~ELa 141 (264)
|++ |+||+|+|+||.+ |++|++ .+ .|++|.+|+|+ ++++++++++|.+|.. +.++|||+|||
T Consensus 70 Pv~-p~~i~~vG~NY~~~~~~h~~e~~~~~~~~~~~~~~~~~~~P~~F~k~~~~~~~g~~~~i~~p~~-~~~~d~E~ELa 147 (293)
T 2q18_X 70 PID-PPEVWGSGISYEMARERYSEENVAKILGKTIYEKVYDAVRPEIFFKATPNRCVGHGEAIAVRSD-SEWTLPEPELA 147 (293)
T ss_dssp SSC-CSCEEEEESCBC---------CCCEETTEEHHHHHHHSSSCEEEEEECGGGEECTTSCEEECTT-CSCEECCEEEE
T ss_pred CcC-cceEEEEEechhhhhHHHHHHhccccccccccccccCCCCCEEEECCCCCeEecCCCEEEcCCC-CCCcceEEEEE
Confidence 998 8999999999997 788876 22 47889999996 6999999999999998 88999999999
Q ss_pred EEEcCCCCCCChhhHhhhhh-----hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEE--CCEEE
Q psy5683 142 VIIGKKTRDVKPHEAMESVF-----ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKV--NGQVK 214 (264)
Q Consensus 142 vVIgk~~~~i~~~~A~~~i~-----ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~v--NGe~~ 214 (264)
|||||.++ ...|.. +||+|. +.+.+|.+||+||+|||+|||++|.||+.|+.+++|+++| |||++
T Consensus 148 vvIg~~~~------i~Gyt~~nDvs~Rd~q~--~~~~~~~~aK~~d~~~plGP~ivt~dei~d~~~l~i~l~v~~NGe~~ 219 (293)
T 2q18_X 148 VVLDSNGK------ILGYTIMDDVSARDLEA--ENPLYLPQSKIYAGCCAFGPVIVTSDEIKNPYSLDITLKIVREGRVF 219 (293)
T ss_dssp EEECTTCC------EEEEEEEEECEEHHHHH--HCGGGHHHHHCSTTCEEEEEEEECGGGCSCTTSCEEEEEEEETTEEE
T ss_pred EEECCCCc------CceEEEEEEeEeehhhh--hcccCccccccCCCCEEECCcEeCHHHcCCcceeEEEEEEEECCEEE
Confidence 99999985 122322 899997 3445678999999999999999999999899999999988 99999
Q ss_pred Eec--cccccccChHHHHHHHHCCcccCCCCEEEcCC---CCCCCCCC
Q psy5683 215 QNA--SSSNMLHKIPEIVSYLSEMITLLPGDVILTGT---PAGVGVFR 257 (264)
Q Consensus 215 q~~--~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGT---p~Gvg~~~ 257 (264)
|++ ||++|+|++++||+|+|+++||+|||||+||| |.+++..+
T Consensus 220 q~g~~~t~~mi~~~~~li~~ls~~~tL~pGDvI~TGTg~~p~~~~~l~ 267 (293)
T 2q18_X 220 FEGSVNTNKMRRKIEEQIQYLIRDNPIPDGTILTTGTAIVPGRDKGLK 267 (293)
T ss_dssp EEEEEEGGGBCSCHHHHHHHHHTTCCCCTTEEEECCCSCCCCTTCCCC
T ss_pred EECCCCHHHhccCHHHHHHHHHcCCCCCCCCEEECCCCCCCCCCcccC
Confidence 997 69999999999999999999999999999999 66655444
No 10
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=6e-52 Score=393.81 Aligned_cols=188 Identities=35% Similarity=0.575 Sum_probs=171.1
Q ss_pred cccCCCcEEcCCCccCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcC
Q psy5683 67 MVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGK 146 (264)
Q Consensus 67 ~~~~~~v~ll~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk 146 (264)
.+++++++|++|++ +||+|+|+||++|++|+|.+.|++|++|.|+++++++++++|.+|.. +.++|||+|||+||||
T Consensus 209 ~~~~~~~~~~~p~~--~~i~~vG~ny~~h~~e~g~~~p~~P~~f~k~~~~~~~~g~~i~~p~~-~~~~~~E~Elavvig~ 285 (429)
T 1gtt_A 209 VTTRKSFPTLPHPH--GTLFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNN-IEYMHYEAELVVVIGK 285 (429)
T ss_dssp CCSCCCCCCCSSSC--SCEEEESSCBCCC--------CCSCCEEEECGGGEECTTEEEEECTT-CSCEECCEEEEEEECS
T ss_pred ccccccceecCCCC--CcEEEEEeCHHHHHHHhCCCCCCCCEEEEcCcceEeCCCCeEEcCCC-CCCccEEEEEEEEECC
Confidence 46899999999997 89999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred CCCCCChhhHhhhhh---------hhhc-ccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEe
Q psy5683 147 KTRDVKPHEAMESVF---------ESDW-QKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQN 216 (264)
Q Consensus 147 ~~~~i~~~~A~~~i~---------ard~-q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~ 216 (264)
.++++++++|++||+ +||| |. ...+|.++|+||+|||+|||+++.++++|+.+++|+++||||++|+
T Consensus 286 ~~~~v~~~~a~~~i~g~~~~nD~t~Rd~lq~---~~~~w~~~K~~d~~~~lGp~iv~~~~~~d~~~l~i~l~vNGe~~q~ 362 (429)
T 1gtt_A 286 QARNVSEADAMDYVAGYTVCNDYAIRDYLEN---YYRPNLRVKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQ 362 (429)
T ss_dssp CBSSCCTTTGGGGEEEEEEEECCEEGGGCCS---SSSSCHHHHSCTTCEEBCSCCEEGGGCSCTTSCEEEEEETTEEEEE
T ss_pred CCCCCCHHHHHhhheEEEEEEEcccchhhhh---hcCCccccccCCCCEEECCcccCHHHcCCCccceEEEEECCEEEEE
Confidence 999999999999999 8994 76 4689999999999999999999999999999999999999999999
Q ss_pred ccccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 217 ASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 217 ~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
++|++|+|+++++|+|+|+++||+|||||+||||+|+|..+..+
T Consensus 363 g~~~~mi~~~~~lia~ls~~~tL~~GDvI~TGTp~gvg~l~~GD 406 (429)
T 1gtt_A 363 GTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLSDVVPGD 406 (429)
T ss_dssp EEGGGBSSCHHHHHHHHHTTSCBCTTCEEECCCCSCCCBCCTTC
T ss_pred eCHHHcCCCHHHHHHHHhCCCCcCCCCEEEcCCCCCCeECCCCC
Confidence 99999999999999999999999999999999999999776543
No 11
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=100.00 E-value=3.9e-52 Score=364.24 Aligned_cols=180 Identities=38% Similarity=0.601 Sum_probs=157.3
Q ss_pred CccCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCChhhHhh
Q psy5683 79 ITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAME 158 (264)
Q Consensus 79 v~~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~~~A~~ 158 (264)
+.+|+||+|+|+||++|++|+|.+.|++|++|.|+++++++++++|.+|.. +.++|||+||||||||.++++++++|++
T Consensus 15 ~~~~~ki~~vG~ny~~h~~e~g~~~P~~P~~f~k~~~~~~~~g~~i~~p~~-~~~~~~E~ELavvig~~~~~v~~~~a~~ 93 (225)
T 1saw_A 15 WEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAY-TRNLHHELELGVVMGKRCRAVPEAAAMD 93 (225)
T ss_dssp HHHCCEEEEESCCBC-----------CCCCEEEEEGGGEEETTSCEECCTT-CSCEEECEEEEEEESSCBCSCCTTTGGG
T ss_pred ccCCCeEEEEEeCcHHHHHHhCCCCCCCCEEEECCcceeeCCCCeEECCCC-CCCccEEEEEEEEECCCCCCCCHHHHHH
Confidence 556899999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred hhh---------hhhcccc-cccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEeccccccccChHH
Q psy5683 159 SVF---------ESDWQKS-SRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPE 228 (264)
Q Consensus 159 ~i~---------ard~q~~-~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~~m~~~~~~ 228 (264)
||+ +||+|.. +..+.+|.+||+||+|||+|||+ +.+++.|+.+++++++||||++|++++++|+|++++
T Consensus 94 ~i~g~~~~nDvt~r~~q~~~~~~~~~~~~aK~~d~~~plGp~v-~~~~~~d~~~l~l~l~vNGe~~q~g~~~~mi~~~~~ 172 (225)
T 1saw_A 94 YVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPY 172 (225)
T ss_dssp SEEEEEEEECCEEHHHHHHHHHHTCCSHHHHCSTTCEEECCCE-ETTSCSCTTSCEEEEEETTEEEEEEEGGGBSSCHHH
T ss_pred hheEEEecccccHHHHhhhhhccCCCceEeecCCCCEecCCcc-cHHHcCCCceeEEEEEECCEEEEEEcHHHcCCCHHH
Confidence 998 8999873 12468999999999999999996 778888999999999999999999999999999999
Q ss_pred HHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 229 IVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 229 lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
+|+|+|+++||+|||||+||||+|+|..+...
T Consensus 173 lia~ls~~~tL~~GDvI~TGTp~Gvg~l~~Gd 204 (225)
T 1saw_A 173 IISYVSKIITLEEGDIILTGTPKGVGPVKEND 204 (225)
T ss_dssp HHHHHHTTSCBCTTCEEECCCCSCCEEECTTC
T ss_pred HHHHHhCCCCcCCCCEEEcCCCCCceeCCCCC
Confidence 99999999999999999999999998765443
No 12
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A
Probab=100.00 E-value=1.8e-50 Score=381.19 Aligned_cols=246 Identities=20% Similarity=0.286 Sum_probs=204.7
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCCC-------------CCcccHHHHHhCCcHHHHHHHHHHhh----
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDS-------------SMPNNLVQFLEGGPELLEKAKRMVSE---- 63 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~~-------------~~p~~l~~~l~~~~~~~~~~~~~~~~---- 63 (264)
|+|.+|+..++ +.+|+|++++ +.|+||+.... ..+++|++||+.+.+.++++++.++.
T Consensus 19 lp~g~f~~~~~---~~~r~Gv~ig--d~v~DL~~~~~~~~~~~~~~~~~~~~~~tL~~~l~~g~~~~~~~r~~l~~~~~~ 93 (421)
T 1hyo_A 19 LPYGVFSTQSN---PKPRIGVAIG--DQILDLSVIKHLFTGPALSKHQHVFDETTLNNFMGLGQAAWKEARASLQNLLSA 93 (421)
T ss_dssp CCEEEEECSSC---CSCEEEEEET--TEEEETTTTGGGCCSTTTTTCGGGGGSSSSHHHHHHCHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEeCCC---CceEEEEEeC--CEEEeHHHhHhhcccccccccccccCCcCHHHHHhcChHHHHHHHHHHHHHhhc
Confidence 89999997554 6789999977 57999986421 13479999999887777777665542
Q ss_pred cc------------ccccCCCcEEcCCCccCCeEEEEecCcHHHHHHhCC--------CCC---CCCEEEecCCCceecC
Q psy5683 64 CK------------CMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNK--------TYP---ETPFFFNKFPSTIVGP 120 (264)
Q Consensus 64 ~~------------~~~~~~~v~ll~Pv~~p~ki~~~g~Ny~~h~~e~~~--------~~p---~~P~~F~K~~~s~~g~ 120 (264)
.. ..+++++++|++|++.+ ++.. ..+|.+|++|++. ..| +.|++|+|++++++++
T Consensus 94 ~~~~l~~~~~~~~~~~~~~~~v~ll~P~~~~-~y~d-f~~~~~Ha~~~g~~~r~~~~~~~p~~~~~Pv~f~k~~ssvv~~ 171 (421)
T 1hyo_A 94 SQARLRDDKELRQRAFTSQASATMHLPATIG-DYTD-FYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVS 171 (421)
T ss_dssp SSTHHHHCHHHHHHHEEESTTCEEECSSCCS-CEEE-ECCCHHHHHHHHHHHHCGGGCSCTTTTTSCCEEECCSTTEEET
T ss_pred cCccccccccccccccccHhHCeEcCCcccC-cEEE-EechHHHHHHHHhhhccccccCCCCcCCCCEEEEcccceEEcC
Confidence 11 14789999999999755 3322 2457888888642 245 6799999999999999
Q ss_pred CCeeecCCC-------------CcCCceeeeEEEEEEcCC---CCCCChhhHhhhhh---------hhhcccccccCCCc
Q psy5683 121 FSEVTCPTN-------------VTRYLDWEVELAVIIGKK---TRDVKPHEAMESVF---------ESDWQKSSRNGGQW 175 (264)
Q Consensus 121 g~~I~~P~~-------------~~~~~d~E~ELavVIgk~---~~~i~~~~A~~~i~---------ard~q~~~~~~~~~ 175 (264)
|++|.+|.. .+.++|||+||||||||. |++|++++|++||+ +||+|.++..+.+|
T Consensus 172 g~~I~~P~~~~~~~~~~~p~~~~s~~lD~E~ELavvIG~~~~~g~~v~~~~A~~~I~Gy~l~ND~SaRdiQ~~e~~plg~ 251 (421)
T 1hyo_A 172 GTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYVPLGP 251 (421)
T ss_dssp TCCEECCEEEECSCTTSCCEEEECSCEECBEEEEEEECSCCCTTCCCCHHHHGGGEEEEEEEECCEEHHHHHHHCTTTCC
T ss_pred CCeEECCCCcccCccccccccccccCceEEEEEEEEECcccccCCCCCHHHHHHhhcEEEEEEeccHHhhhhhhcccCCC
Confidence 999999974 157999999999999999 89999999999999 99999865556789
Q ss_pred eeccccCCCcccCCcccccccCC--------------------CCC--ceEEEEEEC------CEEEEeccccccccChH
Q psy5683 176 LFAKSLDTFCPLGPSVVMKEYLN--------------------DPH--DVTLTCKVN------GQVKQNASSSNMLHKIP 227 (264)
Q Consensus 176 ~~~K~~d~~~plGP~ivt~de~~--------------------d~~--~l~i~~~vN------Ge~~q~~~t~~m~~~~~ 227 (264)
++||+||++ +|||+||.|+++ ++. +++|+++|| |+++|++|+++|+|+++
T Consensus 252 ~~aK~f~t~--iGPwivt~d~l~p~~~~~~~~~~~~l~~l~~~~~~~~~l~l~~~vN~~~~~~Ge~~q~~~~~~m~~~~~ 329 (421)
T 1hyo_A 252 FLGKSFGTT--ISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRSNFKHMYWTML 329 (421)
T ss_dssp CHHHHTCEE--ECSCBEEHHHHGGGEECCCCCSSCCCGGGCCCSCCEECCEEEEEEECTTCSSCEEEEEEETTCCSSCHH
T ss_pred ccccCcCCC--CCCeecchhhcccccccccccCCcccccccccCCCccceEEEEEEecCCCCCCEEEEecCHHhhcCCHH
Confidence 999999996 999999998874 333 689999999 99999999999999999
Q ss_pred HHHHHHH-CCcccCCCCEEEcCCCCCCCC
Q psy5683 228 EIVSYLS-EMITLLPGDVILTGTPAGVGV 255 (264)
Q Consensus 228 ~lia~lS-~~~tL~pGDvI~TGTp~Gvg~ 255 (264)
++|+|+| ++++|+|||||+||||+|+|.
T Consensus 330 ~lIa~lss~g~tL~pGDlI~TGTpsG~~~ 358 (421)
T 1hyo_A 330 QQLTHHSVNGCNLRPGDLLASGTISGSDP 358 (421)
T ss_dssp HHHHHHHTTSCCCCTTCEEECCCCCCSSG
T ss_pred HHHHHHHHCCCccCCCCEEEcCCCCCCCC
Confidence 9999995 899999999999999999985
No 13
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=100.00 E-value=8.7e-51 Score=362.15 Aligned_cols=182 Identities=36% Similarity=0.619 Sum_probs=163.5
Q ss_pred cCCCccCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecC------------------------C-CeeecCCCC
Q psy5683 76 LPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP------------------------F-SEVTCPTNV 130 (264)
Q Consensus 76 l~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~------------------------g-~~I~~P~~~ 130 (264)
+.|+++|+||+|+|+||++|++|++.+.|++|++|+|++++++++ + ++|.+|..
T Consensus 3 ~~~~~~~~ki~cvG~Ny~~H~~E~g~~~p~~P~~F~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~p~~- 81 (259)
T 1nkq_A 3 YNYLKAARKIICIGRNYAAHIKELNNSTPKQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGTNPGPIFIPRG- 81 (259)
T ss_dssp CGGGGGCCCEEEECSCBCSSGGGGGC----CCCEEEECGGGEEBCTTCC------CCSCSCCCCCTTSCCBCCEEECTT-
T ss_pred cccCCCCCEEEEEecCHHHHHHHhCCCCCCCCEEEeeChhhEecccccccccccccccccccccccccCCCCcEEcCCC-
Confidence 467889999999999999999999999999999999999999998 4 99999998
Q ss_pred cCCceeeeEEEEEEcCCCCCCCh---hhHhhhhh---------hhhcccc-cccCCCceeccccCCCcccCCcccccccC
Q psy5683 131 TRYLDWEVELAVIIGKKTRDVKP---HEAMESVF---------ESDWQKS-SRNGGQWLFAKSLDTFCPLGPSVVMKEYL 197 (264)
Q Consensus 131 ~~~~d~E~ELavVIgk~~~~i~~---~~A~~~i~---------ard~q~~-~~~~~~~~~~K~~d~~~plGP~ivt~de~ 197 (264)
+ ++|||+|||+||||.++++++ ++|++||+ +||+|.. ...+.+|.+||+||+|||+|||+ +.+++
T Consensus 82 ~-~~d~E~ELavvIg~~~~~v~~~t~~ea~~~I~g~~~~nDvt~Rd~q~~~~~~~~~~~~aK~~d~~~p~Gp~V-~~~~~ 159 (259)
T 1nkq_A 82 V-KVHHEIELALIVSKHLSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLPWTISKGFDTFMPISAIV-SREKF 159 (259)
T ss_dssp C-CEEECEEEEEEECSCBCSCCCCCGGGTGGGEEEEEEEECCEEHHHHHHHHHHTCCSHHHHHSTTCEEBCCCE-EGGGG
T ss_pred C-cccEEEEEEEEECCCCCCCCcCCHHHHHhhhhEEEEEEeeeHHHhhhhhhhcCCCcceeeccCcCCCcceEE-ECccc
Confidence 6 699999999999999999988 99999998 8888862 23478999999999999999986 56778
Q ss_pred CCC-----CceEEEEEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 198 NDP-----HDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 198 ~d~-----~~l~i~~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
.|+ .+++|+++||||++|++++++|+|++++||+|+|+++||+|||||+||||+|+|..+..+
T Consensus 160 ~d~~~dl~~~l~l~l~vNGe~~q~g~t~~m~~~~~~Lia~lS~~~tL~pGDvI~TGTp~Gvg~l~~GD 227 (259)
T 1nkq_A 160 SSYKSNLQDIFRVKCSVNGQLRQDGGTNLMLHPLHKILQHISTMISLEPGDIILTGTPAGVGELKPGD 227 (259)
T ss_dssp GGGTTCCTTTEEEEEEETTEEEEEEEGGGBSSCHHHHHHHHHTTSCBCTTCEEECCCCSCCEEECTTC
T ss_pred cCcccccccceEEEEEECCEEEEEEcHHHcCCCHHHHHHHHhCCCCcCCCCEEEeCCCCCcEecCCCC
Confidence 777 899999999999999999999999999999999999999999999999999999766443
No 14
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=6.5e-48 Score=366.14 Aligned_cols=168 Identities=26% Similarity=0.404 Sum_probs=157.3
Q ss_pred CCeEEEEecCcHHHHHHhCC--------CCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCCh
Q psy5683 82 PDKILCIALNYKDHCDEQNK--------TYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKP 153 (264)
Q Consensus 82 p~ki~~~g~Ny~~h~~e~~~--------~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~ 153 (264)
|+||+|+|+||++|++|++. +.|++|.+|+|++++++++|++|.+|.. +. +|||+|||+||||.++++++
T Consensus 2 p~ki~cvg~Ny~~H~~e~~~~~~~~~~~~~p~~P~~f~k~~~~~~~~g~~i~~p~~-~~-~~~E~Elavvig~~~~~v~~ 79 (429)
T 1gtt_A 2 KGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNTVIGCGEPIPFPQG-EK-VLSGATVALIVGKTATKVRE 79 (429)
T ss_dssp CSCEEEEESCBHHHHHHHTTGGGSTTTCSCCSSCEEEEECGGGEECTTCCEEECTT-CC-EECCEEEEEEECSCBSSCCG
T ss_pred CceEEEEechHHHHHHHhhccccccccCCCCCCCEEEEcCcceEEcCCCeeecCCC-CC-ccEEEEEEEEECCCCCCCCH
Confidence 68999999999999999973 6789999999999999999999999998 77 99999999999999999999
Q ss_pred hhHhhhhh---------hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEecccccccc
Q psy5683 154 HEAMESVF---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLH 224 (264)
Q Consensus 154 ~~A~~~i~---------ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~~m~~ 224 (264)
++|++||+ +||+|. +.+|.+||+||+|||+||| +++.|+.+++|+++||||++|+++|++|+|
T Consensus 80 ~~a~~~i~gy~~~nD~s~Rd~~~----~~~~~~aK~fd~~~~lGp~----~~~~d~~~l~i~~~vNGe~~q~g~t~~mi~ 151 (429)
T 1gtt_A 80 EDAAEYIAGYALANDVSLPEESF----YRPAIKAKCRDGFCPIGET----VALSNVDNLTIYTEINGRPADHWNTADLQR 151 (429)
T ss_dssp GGGGGGEEEEEEEECCBSCCCCS----SSCCHHHHCSTTCEEBCCC----BCCSCCTTCEEEEEETTEEEEEEEGGGBSS
T ss_pred HHHHhHhhEEEEEEEeeehhhhc----cCCccccCCCCCCEEECCh----hhcCCccccEEEEEECCEEEEeCCHHHhcC
Confidence 99999999 777664 4689999999999999999 678899999999999999999999999999
Q ss_pred ChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCC
Q psy5683 225 KIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259 (264)
Q Consensus 225 ~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p 259 (264)
+++++|+|+|+++||+|||||+||||+|++..+..
T Consensus 152 ~~~~li~~ls~~~tL~~GDvI~TGTp~g~~~l~~G 186 (429)
T 1gtt_A 152 NAAQLLSALSEFATLNPGDAILLGTPQARVEIQPG 186 (429)
T ss_dssp CHHHHHHHHHTTSCBCTTCEEECCCCSCCCEECTT
T ss_pred CHHHHHHHHhcCCCcCCCCEEEEeccCcceecCCC
Confidence 99999999999999999999999999999876543
No 15
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=100.00 E-value=1.7e-40 Score=297.83 Aligned_cols=173 Identities=16% Similarity=0.187 Sum_probs=152.1
Q ss_pred CccCCeEEE--EecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCC--CCCCChh
Q psy5683 79 ITRPDKILC--IALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKK--TRDVKPH 154 (264)
Q Consensus 79 v~~p~ki~~--~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~--~~~i~~~ 154 (264)
+.++++|+| +|+||++|++|+|.+.|.+|.+|.| +++++|++|.+|.. .+++||+||||||||+ +++++++
T Consensus 51 ~~~g~~i~g~KiGln~~~h~~e~g~~~P~~~~lf~~---~~~~~g~~i~~p~~--~~~~~E~ELa~vig~~~~g~~vt~~ 125 (270)
T 2wqt_A 51 VAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFAD---MCYGDNEIIPFSRV--LQPRIEAEIALVLNRDLPATDITFD 125 (270)
T ss_dssp HHTTCCEEEEEEECCSHHHHHTTTCSSCEEEEEEGG---GEEETTEEECGGGS--SSCEEEEEEEEEESSCBCCTTCCHH
T ss_pred hhCCCceEEeEecCCCHHHHHHhCCCCCCEEEEech---heeCCCCeeecCcc--CccceeeEEEEEECCCCCCCCCCHH
Confidence 345789999 9999999999999999999999976 79999999999987 5899999999999999 5899999
Q ss_pred hHhhhhh----hhhcccccccCCCceeccccCCCc--------ccCCcccccccCCCCCceEEEEEECCEEEEecccccc
Q psy5683 155 EAMESVF----ESDWQKSSRNGGQWLFAKSLDTFC--------PLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNM 222 (264)
Q Consensus 155 ~A~~~i~----ard~q~~~~~~~~~~~~K~~d~~~--------plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~~m 222 (264)
+|++||. +-++..+ ....|. +|+||++| ++|||+++.+++ |+.++.++++||||++|+|++++|
T Consensus 126 ~a~~ai~~v~~~~ei~D~--~~~~~~-~k~~d~~aDn~s~~~~~lGp~~v~~~~~-d~~~l~i~l~vNGe~~q~g~~~~m 201 (270)
T 2wqt_A 126 ELYNAIEWVLPALEVVGS--RIRDWS-IQFVDTVADNASCGVYVIGGPAQRPAGL-DLKNCAMKMTRNNEEVSSGRGSEC 201 (270)
T ss_dssp HHHTTEEEEEEEEEEECC--SBGGGC-CCHHHHHHTGGGCCEEEECBCCBCSTTC-CCSSCEEEEEETTEEEEEEEGGGT
T ss_pred HHHHhhCeEEEEEEEEcC--cccccC-CChhcEEccCccCCCEeECcCcCCcccC-ChhhCeEEEEECCEEEEEEchhhc
Confidence 9998554 4444331 123453 79999998 999999999998 899999999999999999999999
Q ss_pred ccChHHHHHHHHC-----CcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 223 LHKIPEIVSYLSE-----MITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 223 ~~~~~~lia~lS~-----~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
+|+|.++|+|||+ ++||+|||||+||||.|++..+...
T Consensus 202 l~~p~~~v~~ls~~l~~~g~tL~~GdvI~TGT~~g~~~l~~GD 244 (270)
T 2wqt_A 202 LGHPLNAAVWLARKMASLGEPLRTGDIILTGALGPMVAVNAGD 244 (270)
T ss_dssp TTSHHHHHHHHHHHHHHTTCCBCTTCEEEEEESSCCEECCTTC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcCCCCEEEcCCCCCCeeCCCCC
Confidence 9999999999998 7999999999999999988766443
No 16
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=100.00 E-value=1.5e-40 Score=297.65 Aligned_cols=174 Identities=16% Similarity=0.129 Sum_probs=148.4
Q ss_pred cCCeEEE--EecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCC--CCCCChhhH
Q psy5683 81 RPDKILC--IALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKK--TRDVKPHEA 156 (264)
Q Consensus 81 ~p~ki~~--~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~--~~~i~~~~A 156 (264)
++++|+| +|+||++|++|+|.+.|.+|.+| +++++++|++|.+|.. . +++||+||||||||+ ++++++++|
T Consensus 53 ~g~~ivg~KiGl~~~~~~~~~g~~~P~~~~l~---~~~~~~~g~~i~~p~~-~-~~~~E~ELa~vig~~l~~~~vt~~~a 127 (267)
T 2eb4_A 53 EGRTLKGHKIGLTSKAMQASSQISEPDYGALL---DDMFFHDGSDIPTDRF-I-VPRIEVELAFVLAKPLRGPNCTLFDV 127 (267)
T ss_dssp TTCCEEEEEEECHHHHHCSSCCCCSCEEEEEE---GGGEECTTEEECGGGC-S-SCEEEEEEEEEESSCBCCSSCCHHHH
T ss_pred CCCceEEEEeccCCHHHHHHhCCCCCcEEEEe---chheecCCCeecCCcc-C-cccEeeEEEEEECCCCCCCCCCHHHH
Confidence 4678999 99999999999998876666666 6789999999999987 4 799999999999999 689999999
Q ss_pred hhhhh----hhhc-----ccccc-----cCCCceecc-ccCCCcccCCcccccccCCCCCceEEEEEECCEEEEeccccc
Q psy5683 157 MESVF----ESDW-----QKSSR-----NGGQWLFAK-SLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSN 221 (264)
Q Consensus 157 ~~~i~----ard~-----q~~~~-----~~~~~~~~K-~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~~ 221 (264)
++||+ +.|+ +.+.+ .+..|..+| ++++++|+|||+++.+++ |+.++.++++||||++|+|++++
T Consensus 128 ~~~v~g~~~~~ei~d~r~~~~~~~~~~~~~~~~~~Ad~~~~~~~~lGp~~v~~~~~-d~~~l~~~l~vNGe~~q~g~t~~ 206 (267)
T 2eb4_A 128 YNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKPDEL-DLRWISALMYRNGVIEETGVAAG 206 (267)
T ss_dssp HHHEEEEEEEEEEECCSBCCC------CCHHHHHHHTGGGEEEEEECSCCBCTTSS-CGGGCEEEEEETTEEEEEEEGGG
T ss_pred HHhhceEEEEEEeecccccccccccccccCccceeecccccccEEECCCcCCcccC-ChhhCeEEEEECCEEEEEecHHh
Confidence 99998 2222 22111 123455665 688999999999999998 89999999999999999999999
Q ss_pred cccChHHHHHHHHCCc-----ccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 222 MLHKIPEIVSYLSEMI-----TLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 222 m~~~~~~lia~lS~~~-----tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
|+|+|.++|+|||+.+ ||+|||||+||||.|++..+...
T Consensus 207 ml~~p~~~i~~ls~~l~~~g~tL~~GDvI~TGT~~g~~~l~~GD 250 (267)
T 2eb4_A 207 VLNHPANGVAWLANKLAPYDVQLEAGQIILGGSFTRPVPARKGD 250 (267)
T ss_dssp TTTSTTHHHHHHHHHHGGGTCCBCTTCEEECCCSSCCEECCTTC
T ss_pred cccCHHHHHHHHHHHHHHcCCCCCCCCEEECCCCCCCEECCCCC
Confidence 9999999999999865 99999999999999988776543
No 17
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=59.58 E-value=9.3 Score=26.37 Aligned_cols=46 Identities=22% Similarity=0.326 Sum_probs=32.1
Q ss_pred EEEEECCEEEEeccccccccChHHHHHHHHC--------------------CcccCCCCEEEcCCCCCCCC
Q psy5683 205 LTCKVNGQVKQNASSSNMLHKIPEIVSYLSE--------------------MITLLPGDVILTGTPAGVGV 255 (264)
Q Consensus 205 i~~~vNGe~~q~~~t~~m~~~~~~lia~lS~--------------------~~tL~pGDvI~TGTp~Gvg~ 255 (264)
|+++|||+.++- .. -++.+|++.+.- ...|..||.|--=+|-|-|.
T Consensus 1 M~I~vNG~~~e~-~~----~Tl~~LL~~l~~~~~~vAV~vNg~iVpr~~~~~~~L~dGD~veIv~~VgGG~ 66 (73)
T 2kl0_A 1 MLVTINGEQREV-QS----ASVAALMTELDCTGGHFAVALNYDVVPRGKWDETPVTAGDEIEILTPRQGGL 66 (73)
T ss_dssp CCEEETTEEECC-CC----SBHHHHHHHTTCCSSSCEEEESSSEECHHHHTTCBCCTTCEEEEECCCCCCC
T ss_pred CEEEECCEEEEc-CC----CcHHHHHHHcCCCCCcEEEEECCEECChHHcCcccCCCCCEEEEEccccCCc
Confidence 346788887764 21 367777777641 25799999999888877554
No 18
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=49.56 E-value=25 Score=24.50 Aligned_cols=48 Identities=25% Similarity=0.259 Sum_probs=33.2
Q ss_pred EEEEECCEEEEec--cccccccChHHHHHHHHC---------------------CcccCCCCEEEcCCCCCCCCC
Q psy5683 205 LTCKVNGQVKQNA--SSSNMLHKIPEIVSYLSE---------------------MITLLPGDVILTGTPAGVGVF 256 (264)
Q Consensus 205 i~~~vNGe~~q~~--~t~~m~~~~~~lia~lS~---------------------~~tL~pGDvI~TGTp~Gvg~~ 256 (264)
|+++|||+.++-. .. -++.+|++.+.- ...|..||.|--=++-|-|..
T Consensus 1 M~I~vNGe~~e~~~~~~----~Tl~~LL~~l~~~~~~~vAVavNg~iVpr~~~~~~~L~dGD~IEIv~~VgGG~~ 71 (78)
T 2k5p_A 1 MNLTVNGKPSTVDGAES----LNVTELLSALKVAQAEYVTVELNGEVLEREAFDATTVKDGDAVEFLYFMGGGKL 71 (78)
T ss_dssp CEEEETTEEEECSSCSC----EEHHHHHHHHTCSCTTTCCEEETTEECCTTHHHHCEECSSBCEEECCCCCCSCC
T ss_pred CEEEECCEEEEcCCCCC----CcHHHHHHHcCCCCCCcEEEEECCEECChHHcCcccCCCCCEEEEEeeecCCCc
Confidence 4678899888743 11 367777777741 145899999998888776654
No 19
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=48.07 E-value=12 Score=24.96 Aligned_cols=42 Identities=24% Similarity=0.221 Sum_probs=25.0
Q ss_pred EEEECCEEEEeccccccccChHHHHHHHHC--------------------CcccCCCCEEEcCCCC
Q psy5683 206 TCKVNGQVKQNASSSNMLHKIPEIVSYLSE--------------------MITLLPGDVILTGTPA 251 (264)
Q Consensus 206 ~~~vNGe~~q~~~t~~m~~~~~~lia~lS~--------------------~~tL~pGDvI~TGTp~ 251 (264)
+++|||+.++-... -++.++++++.. ...|..||.|.-=+|-
T Consensus 2 ~i~vNg~~~~~~~~----~tv~~ll~~l~~~~~~v~vavN~~~v~~~~~~~~~L~~gD~v~i~~~V 63 (66)
T 1f0z_A 2 QILFNDQAMQCAAG----QTVHELLEQLDQRQAGAALAINQQIVPREQWAQHIVQDGDQILLFQVI 63 (66)
T ss_dssp CEEESSCEECCCTT----CCHHHHHHHHTCCCSSEEEEETTEEECHHHHTTCCCCTTEEECEEESC
T ss_pred EEEECCEEEEcCCC----CcHHHHHHHcCCCCCCEEEEECCEECCchhcCCcCCCCCCEEEEEeec
Confidence 45677777653221 267777777641 2457778877655553
No 20
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=45.08 E-value=15 Score=26.28 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=27.5
Q ss_pred ceEEEEEECCEEEEeccccccccChHHHHHHHHC--------------------CcccCCCCEEEcCCCCC
Q psy5683 202 DVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSE--------------------MITLLPGDVILTGTPAG 252 (264)
Q Consensus 202 ~l~i~~~vNGe~~q~~~t~~m~~~~~~lia~lS~--------------------~~tL~pGDvI~TGTp~G 252 (264)
...|+++|||+.++-... --++.+|++.+.- ...|..||.|.-=+|-|
T Consensus 18 ~~~M~I~vNGe~~el~~~---~~Tv~dLL~~L~~~~~~vaVavNg~iV~~~~~~~~~L~dGD~Vei~~~V~ 85 (87)
T 1tyg_B 18 GGRHMLQLNGKDVKWKKD---TGTIQDLLASYQLENKIVIVERNKEIIGKERYHEVELCDRDVIEIVHFVG 85 (87)
T ss_dssp ----CEEETTEEECCSSS---CCBHHHHHHHTTCTTSCCEEEETTEEECGGGTTTSBCCSSSEEEEEEECC
T ss_pred CcceEEEECCEEEECCCC---CCcHHHHHHHhCCCCCCEEEEECCEECChhhcCCcCCCCCCEEEEEcccc
Confidence 345677888887763221 1267777777641 14578888876655543
No 21
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=41.38 E-value=33 Score=22.54 Aligned_cols=41 Identities=17% Similarity=0.189 Sum_probs=25.5
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHC--------------------CcccCCCCEEEcCCCCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSE--------------------MITLLPGDVILTGTPAG 252 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~--------------------~~tL~pGDvI~TGTp~G 252 (264)
++|||+.++- .. -++.++++++.. ...|.+||.|.-=+|-+
T Consensus 2 i~vNg~~~~~-~~----~tv~~ll~~l~~~~~~v~vavN~~~v~~~~~~~~~L~dgD~v~i~~~V~ 62 (64)
T 2cu3_A 2 VWLNGEPRPL-EG----KTLKEVLEEMGVELKGVAVLLNEEAFLGLEVPDRPLRDGDVVEVVALMQ 62 (64)
T ss_dssp EEETTEEECC-TT----CCHHHHHHHHTBCGGGEEEEETTEEEEGGGCCCCCCCTTCEEEEEECCC
T ss_pred EEECCEEEEc-CC----CcHHHHHHHcCCCCCcEEEEECCEECCccccCCcCCCCCCEEEEEeecc
Confidence 4677777654 11 267777777641 14688888887666543
No 22
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=37.20 E-value=18 Score=24.48 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=26.7
Q ss_pred EEEEECCEE----EEeccccccccChHHHHHHHH----------------CCcccCCCCEEEcCCCCC
Q psy5683 205 LTCKVNGQV----KQNASSSNMLHKIPEIVSYLS----------------EMITLLPGDVILTGTPAG 252 (264)
Q Consensus 205 i~~~vNGe~----~q~~~t~~m~~~~~~lia~lS----------------~~~tL~pGDvI~TGTp~G 252 (264)
|+++|||+. ++-... -++.++++++. +...|.+||.|.-=+|-+
T Consensus 5 m~i~vNg~~~~~~~~~~~~----~tv~~Ll~~l~~~~~~v~vavN~~~v~~~~~L~~gD~V~ii~~V~ 68 (70)
T 1ryj_A 5 MKFTVITDDGKKILESGAP----RRIKDVLGELEIPIETVVVKKNGQIVIDEEEIFDGDIIEVIRVIY 68 (70)
T ss_dssp EEEEEEETTEEEEEEESSC----CBHHHHHHHTTCCTTTEEEEETTEECCTTSBCCTTCEEEEEECTT
T ss_pred EEEEEeCccCceeEECCCC----CcHHHHHHHhCCCCCCEEEEECCEECCCcccCCCCCEEEEEeccc
Confidence 667777776 432111 26777777763 123688888887666644
No 23
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=34.12 E-value=15 Score=28.65 Aligned_cols=29 Identities=14% Similarity=0.020 Sum_probs=22.7
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCCCCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAG 252 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~G 252 (264)
++|||+.+..+ +...|.+||+|.-|.+..
T Consensus 105 T~VNg~~i~~~-----------------~~~~L~~GD~I~lG~~~~ 133 (149)
T 1gxc_A 105 TFVNTELVGKG-----------------KRRPLNNNSEIALSLSRN 133 (149)
T ss_dssp EEETTEECCTT-----------------CEEECCTTEEEEESSTTC
T ss_pred eEECCEECCCC-----------------CeEECCCCCEEEECCCCC
Confidence 58899876543 347899999999998754
No 24
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=29.06 E-value=28 Score=27.35 Aligned_cols=24 Identities=33% Similarity=0.418 Sum_probs=18.9
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGT 249 (264)
++|||+.+. +...|+.||+|.-|.
T Consensus 112 t~VNG~~i~-------------------~~~~L~~GD~I~~G~ 135 (154)
T 4ejq_A 112 TYVNGKKVT-------------------EPSILRSGNRIIMGK 135 (154)
T ss_dssp EEETTEECC-------------------SCEECCTTCEEEETT
T ss_pred eEECCEEcC-------------------CceECCCCCEEEECC
Confidence 889998763 235799999999884
No 25
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=28.33 E-value=26 Score=26.68 Aligned_cols=25 Identities=40% Similarity=0.426 Sum_probs=19.9
Q ss_pred EEEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCC
Q psy5683 206 TCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249 (264)
Q Consensus 206 ~~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGT 249 (264)
.++|||+.+++ ...|+.||.|.-|.
T Consensus 91 gt~VNG~~V~~-------------------~~~L~~GD~I~lG~ 115 (124)
T 3fm8_A 91 RTFVNGSSVSS-------------------PIQLHHGDRILWGN 115 (124)
T ss_dssp CEEETTEECCS-------------------CEEECTTCEEEETT
T ss_pred CEEECCEEcCC-------------------cEECCCCCEEEECC
Confidence 58999988742 26799999999884
No 26
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=27.46 E-value=30 Score=26.52 Aligned_cols=16 Identities=31% Similarity=0.605 Sum_probs=13.9
Q ss_pred CCcccCCCCEEEcCCC
Q psy5683 235 EMITLLPGDVILTGTP 250 (264)
Q Consensus 235 ~~~tL~pGDvI~TGTp 250 (264)
+...|.+||+|..|.|
T Consensus 88 ~~~~L~~GD~I~lG~~ 103 (138)
T 2pie_A 88 RVYSIHQGDYIQLGVP 103 (138)
T ss_dssp CCEECCTTCEEEESCC
T ss_pred CcEECCCCCEEEECCC
Confidence 3578999999999996
No 27
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=27.15 E-value=39 Score=25.71 Aligned_cols=24 Identities=29% Similarity=0.444 Sum_probs=19.5
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp 250 (264)
++|||+.++. ..|.+||+|-.|..
T Consensus 84 T~vNg~~i~~--------------------~~L~~GD~I~iG~~ 107 (131)
T 3hx1_A 84 LMINGKKVQE--------------------HIIQTGDEIVMGPQ 107 (131)
T ss_dssp EEETTEEESE--------------------EECCTTCEEECSTT
T ss_pred eEECCEEeEe--------------------EECCCCCEEEECCE
Confidence 6789987751 68999999999875
No 28
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=25.53 E-value=35 Score=27.77 Aligned_cols=25 Identities=32% Similarity=0.401 Sum_probs=20.1
Q ss_pred EEEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCC
Q psy5683 206 TCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249 (264)
Q Consensus 206 ~~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGT 249 (264)
.++|||+.+. ....|+.||.|.-|.
T Consensus 141 ~t~VNG~~I~-------------------~~~~L~~GDrI~lG~ 165 (184)
T 4egx_A 141 DTYVNGKKVT-------------------EPSILRSGNRIIMGK 165 (184)
T ss_dssp CEEETTEECC-------------------SCEECCTTCEEEETT
T ss_pred eEEEcCEEcc-------------------ccEEcCCCCEEEECC
Confidence 4899998874 345799999999985
No 29
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=25.52 E-value=34 Score=26.10 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=19.2
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGT 249 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGT 249 (264)
|+|||+.+.. .+...|++||+|--|.
T Consensus 96 T~vNg~ri~~-----------------~~~~~L~~GD~I~~G~ 121 (130)
T 4h87_A 96 TFLNKTRIPP-----------------RTYCRVHVGHVVRFGG 121 (130)
T ss_dssp EEETTEECCT-----------------TCCEECCTTCEEEETT
T ss_pred eEECCEECCC-----------------CceeECCCCCEEEECC
Confidence 6789876543 2346799999999885
No 30
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=25.42 E-value=25 Score=27.91 Aligned_cols=28 Identities=29% Similarity=0.273 Sum_probs=21.0
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCCCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTPA 251 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~ 251 (264)
|+|||+.+..+ +...|++||+|-.|...
T Consensus 119 T~VNg~ri~~~-----------------~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 119 TCLNNVVIPGA-----------------RYIELRSGDVLTLSEFE 146 (158)
T ss_dssp CEETTEECCTT-----------------CCEECCTTEEEESSSCG
T ss_pred cEECCEEcCCC-----------------ceEEcCCCCEEEECCCC
Confidence 56788766543 25789999999999754
No 31
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=25.36 E-value=32 Score=28.75 Aligned_cols=17 Identities=29% Similarity=0.348 Sum_probs=14.3
Q ss_pred CCcccCCCCEEEcCCCC
Q psy5683 235 EMITLLPGDVILTGTPA 251 (264)
Q Consensus 235 ~~~tL~pGDvI~TGTp~ 251 (264)
+.+.|.+||+|-.|.+.
T Consensus 177 ~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 177 RYIELRSGDVLTLSEFE 193 (205)
T ss_dssp SCEECCTTCEEESSSSG
T ss_pred ceeECCCCCEEEECCCC
Confidence 35789999999999865
No 32
>2d99_A Muscle, general transcription factor II-I repeat domain- containing protein 1; structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.66 E-value=44 Score=24.17 Aligned_cols=25 Identities=36% Similarity=0.723 Sum_probs=20.2
Q ss_pred cccCCCCEEEcCCCCCCCCCCCCCCC
Q psy5683 237 ITLLPGDVILTGTPAGVGVFRKPIES 262 (264)
Q Consensus 237 ~tL~pGDvI~TGTp~Gvg~~~~p~~~ 262 (264)
+...|++|...|=|.|+. .|+|-.|
T Consensus 37 ~l~~P~~l~V~GLPeGi~-fr~P~~y 61 (90)
T 2d99_A 37 LLREPGLLAVQGLPEGLA-FRRPAEY 61 (90)
T ss_dssp HHHCTTTEEEESCCSSCC-SCCTTTS
T ss_pred HhcCCccEEeecCCCCCc-cCCcccc
Confidence 557999999999999975 6677544
No 33
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=23.29 E-value=29 Score=25.88 Aligned_cols=15 Identities=33% Similarity=0.319 Sum_probs=12.5
Q ss_pred CCcccCCCCEEEcCC
Q psy5683 235 EMITLLPGDVILTGT 249 (264)
Q Consensus 235 ~~~tL~pGDvI~TGT 249 (264)
+...|++||+|.-|.
T Consensus 91 ~~~~L~~GD~I~iG~ 105 (120)
T 1wln_A 91 ETTMLQSGMRLQFGT 105 (120)
T ss_dssp SCEEECTTCEEEETT
T ss_pred CCEECCCCCEEEECC
Confidence 346899999999987
No 34
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=23.06 E-value=36 Score=25.59 Aligned_cols=17 Identities=29% Similarity=0.270 Sum_probs=14.0
Q ss_pred CCcccCCCCEEEcCCCC
Q psy5683 235 EMITLLPGDVILTGTPA 251 (264)
Q Consensus 235 ~~~tL~pGDvI~TGTp~ 251 (264)
+...|.+||+|--|...
T Consensus 92 ~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 92 SNQLLSQGDEITVGVGV 108 (127)
T ss_dssp CCEECCTTCEEEECTTS
T ss_pred CeEEcCCCCEEEECCCc
Confidence 45889999999999764
No 35
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=21.38 E-value=22 Score=25.79 Aligned_cols=13 Identities=38% Similarity=0.445 Sum_probs=10.8
Q ss_pred cccCCCCEEEcCC
Q psy5683 237 ITLLPGDVILTGT 249 (264)
Q Consensus 237 ~tL~pGDvI~TGT 249 (264)
..|.+||+|-.|.
T Consensus 82 ~~L~~Gd~i~~G~ 94 (106)
T 3gqs_A 82 STLSANQVVALGT 94 (106)
T ss_dssp EECCTTCCEEETT
T ss_pred eECCCCCEEEECC
Confidence 4799999998875
No 36
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=21.22 E-value=1.1e+02 Score=20.37 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=20.0
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEE
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEII 30 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~ 30 (264)
|||..|+..+ |+-++=+...+|..|.
T Consensus 1 M~Fei~~~~~----G~frfrLka~NGevI~ 26 (64)
T 3bid_A 1 MYFEIYKDAK----GEYRWRLKAANHEIIA 26 (64)
T ss_dssp CEEEEEECTT----SCEEEEEECTTSCEEE
T ss_pred CEEEEEECCC----CCEEEEEEeCCCCEEE
Confidence 9999999765 5788888877765443
No 37
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=20.83 E-value=39 Score=24.12 Aligned_cols=13 Identities=46% Similarity=0.560 Sum_probs=11.3
Q ss_pred cccCCCCEEEcCC
Q psy5683 237 ITLLPGDVILTGT 249 (264)
Q Consensus 237 ~tL~pGDvI~TGT 249 (264)
..|.+||+|.-|.
T Consensus 77 ~~L~~gd~i~iG~ 89 (100)
T 3po8_A 77 WQLADGDVIRLGH 89 (100)
T ss_dssp EECCTTCEEEETT
T ss_pred EECCCCCEEEECC
Confidence 6899999998886
No 38
>2eje_A General transcription factor II-I; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.72 E-value=55 Score=24.62 Aligned_cols=25 Identities=44% Similarity=0.802 Sum_probs=20.0
Q ss_pred cccCCCCEEEcCCCCCCCCCCCCCCC
Q psy5683 237 ITLLPGDVILTGTPAGVGVFRKPIES 262 (264)
Q Consensus 237 ~tL~pGDvI~TGTp~Gvg~~~~p~~~ 262 (264)
+...|++|+.+|-|.|+. .|+|--|
T Consensus 51 ~~~~P~~v~V~GLPeGi~-fr~P~~y 75 (114)
T 2eje_A 51 ITINPGCVVVDGMPPGVS-FKAPSYL 75 (114)
T ss_dssp HHHCSSSEEEECCCTTCC-CCCTTTS
T ss_pred HhcCCccEEeecCCCCCc-cCCCCcc
Confidence 567999999999999974 6666543
No 39
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=20.33 E-value=49 Score=26.14 Aligned_cols=27 Identities=30% Similarity=0.289 Sum_probs=21.1
Q ss_pred EEECCEEEEeccccccccChHHHHHHHHCCcccCCCCEEEcCCC
Q psy5683 207 CKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGDVILTGTP 250 (264)
Q Consensus 207 ~~vNGe~~q~~~t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp 250 (264)
++|||+.+..+ +...|.+||+|--|..
T Consensus 109 T~vNg~~i~~~-----------------~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 109 TWLNGQKVEKN-----------------SNQLLSQGDEITVGVG 135 (164)
T ss_dssp EEETTEEECTT-----------------EEEECCTTCEEEESCS
T ss_pred eEECCEEcCCC-----------------CceEcCCCCEEEECCC
Confidence 57899877532 3478999999999985
Done!