BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy569
(212 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED 66
NL FQ V + + Y ++K+GEGGFS V L+E YALK+I+CH ++D
Sbjct: 16 NLYFQ------GHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD 69
Query: 67 QAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYY 114
+ +A RE + H+ F HPNIL L+ + L + + ++LP++
Sbjct: 70 REEAQREADMHRLFNHPNILRLVAYCLR-----ERGAKHEAWLLLPFF 112
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTF 177
V + + Y ++K+GEGGFS V L+E YALK+I+CH ++D+ +A RE + H+ F
Sbjct: 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF 83
Query: 178 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYY 211
HPNIL L+ + L + + ++LP++
Sbjct: 84 NHPNILRLVAYCLR-----ERGAKHEAWLLLPFF 112
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVY---VKSDK 124
I+ L D V+ S +++MV+ Y ++ V+ DK
Sbjct: 76 IIKLYD---------VIKSKDEIIMVIEYAGNELFDYIVQRDK 109
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 181
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D V+ S +++MV+ Y
Sbjct: 76 IIKLYD---------VIKSKDEIIMVIEY 95
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVY---VKSDK 124
I+ L D V+ S +++MV+ Y ++ V+ DK
Sbjct: 75 IIKLYD---------VIKSKDEIIMVIEYAGNELFDYIVQRDK 108
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 181
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D V+ S +++MV+ Y
Sbjct: 75 IIKLYD---------VIKSKDEIIMVIEY 94
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVY---VKSDK 124
I+ L D V+ S +++MV+ Y ++ V+ DK
Sbjct: 70 IIKLYD---------VIKSKDEIIMVIEYAGNELFDYIVQRDK 103
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 181
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D V+ S +++MV+ Y
Sbjct: 70 IIKLYD---------VIKSKDEIIMVIEY 89
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVY---VKSDK 124
I+ L D V+ S +++MV+ Y ++ V+ DK
Sbjct: 66 IIKLYD---------VIKSKDEIIMVIEYAGNELFDYIVQRDK 99
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 181
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D V+ S +++MV+ Y
Sbjct: 66 IIKLYD---------VIKSKDEIIMVIEY 85
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + A RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIAANVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALT 94
I+ + LT
Sbjct: 77 IVRFKEVILT 86
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
SD+Y +V+ IG G F L+ ++ + A+ K I G + A RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIAANVKREIINHRSLRHPN 76
Query: 182 ILPLLDHALT 191
I+ + LT
Sbjct: 77 IVRFKEVILT 86
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 40/170 (23%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI---ICHGREDQAQAIREVEHHKTFVHPN 84
Y I E +GEG F V L H +T+++ ALK I + + + RE+ + K HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEH 144
I+ L D V+ + + ++MV+ Y ++ YIVEK
Sbjct: 71 IIKLYD---------VITTPTDIVMVIEYAGGELF-----DYIVEK-----------KRM 105
Query: 145 SRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP---LLDHALT 191
+ + R ++IIC AI HK VH ++ P LLD L
Sbjct: 106 TEDEGRRFFQQIIC--------AIEYCHRHK-IVHRDLKPENLLLDDNLN 146
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI---ICHGREDQAQAIREVEHHKTFVHPN 181
Y I E +GEG F V L H +T+++ ALK I + + + RE+ + K HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D V+ + + ++MV+ Y
Sbjct: 71 IIKLYD---------VITTPTDIVMVIEY 90
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + RE+ +H++ HPN
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 75
Query: 85 ILPLLDHALT 94
I+ + LT
Sbjct: 76 IVRFKEVILT 85
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
SD+Y +V+ IG G F L+ ++ + A+ K I G + RE+ +H++ HPN
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 75
Query: 182 ILPLLDHALT 191
I+ + LT
Sbjct: 76 IVRFKEVILT 85
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALT 94
I+ + LT
Sbjct: 77 IVRFKEVILT 86
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
SD+Y +V+ IG G F L+ ++ + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 182 ILPLLDHALT 191
I+ + LT
Sbjct: 77 IVRFKEVILT 86
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALT 94
I+ + LT
Sbjct: 77 IVRFKEVILT 86
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
SD+Y +V+ IG G F L+ ++ + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 182 ILPLLDHALT 191
I+ + LT
Sbjct: 77 IVRFKEVILT 86
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALT 94
I+ + LT
Sbjct: 77 IVRFKEVILT 86
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
SD+Y +V+ IG G F L+ + + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 182 ILPLLDHALT 191
I+ + LT
Sbjct: 77 IVRFKEVILT 86
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTF 80
V + + VEKIGEG + V + T + ALKKI + + AIRE+ K
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 81 VHPNILPLLD 90
HPNI+ LLD
Sbjct: 64 NHPNIVKLLD 73
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTF 177
V + + VEKIGEG + V + T + ALKKI + + AIRE+ K
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 178 VHPNILPLLD 187
HPNI+ LLD
Sbjct: 64 NHPNIVKLLD 73
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
+++Y IV+K+G GG STV L E + + A+K I RE + + REV +
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 179 HPNILPLLD 187
H NI+ ++D
Sbjct: 70 HQNIVSMID 78
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
+++Y IV+K+G GG STV L E + + A+K I RE + + REV +
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 82 HPNILPLLD 90
H NI+ ++D
Sbjct: 70 HQNIVSMID 78
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y V+ IG G F L+ TK+ A+ K I G RE+ +H++ HPN
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAV-KYIERGAAIDENVQREIINHRSLRHPN 77
Query: 85 ILPLLDHALT 94
I+ + LT
Sbjct: 78 IVRFKEVILT 87
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
SD+Y V+ IG G F L+ TK+ A+ K I G RE+ +H++ HPN
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAV-KYIERGAAIDENVQREIINHRSLRHPN 77
Query: 182 ILPLLDHALT 191
I+ + LT
Sbjct: 78 IVRFKEVILT 87
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 65 NIVKLLD 71
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 65 NIVKLLD 71
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 66 NIVKLLD 72
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 66 NIVKLLD 72
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 66 NIVKLLD 72
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 66 NIVKLLD 72
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQA 70
G L S E + + + VEKIGEG + V + T + ALKKI + + A
Sbjct: 1 GPLGSPEFM----ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA 56
Query: 71 IREVEHHKTFVHPNILPLLD 90
IRE+ K HPNI+ LLD
Sbjct: 57 IREISLLKELNHPNIVKLLD 76
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 70 NIVKLLD 76
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 64 NIVKLLD 70
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 64 NIVKLLD 70
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 67 NIVKLLD 73
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 67 NIVKLLD 73
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active
Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 64 NIVKLLD 70
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 64 NIVKLLD 70
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 66 NIVKLLD 72
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 66 NIVKLLD 72
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 66 NIVKLLD 72
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 66 NIVKLLD 72
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 62 NIVKLLD 68
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 62 NIVKLLD 68
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 62 NIVKLLD 68
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 62 NIVKLLD 68
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQA 70
G L S E + + + VEKIGEG + V + T + ALKKI + + A
Sbjct: 1 GPLGSPEFM----ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA 56
Query: 71 IREVEHHKTFVHPNILPLLD 90
IRE+ K HPNI+ LLD
Sbjct: 57 IREISLLKELNHPNIVKLLD 76
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 70 NIVKLLD 76
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr
160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin
B
Length = 289
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Dph- 042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Din- 234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With
Din- 232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With
Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor
Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 62 NIVKLLD 68
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 62 NIVKLLD 68
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 64 NIVKLLD 70
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 64 NIVKLLD 70
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 66 NIVKLLD 72
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 66 NIVKLLD 72
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 65 NIVKLLD 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 65 NIVKLLD 71
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 62 NIVKLLD 68
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 62 NIVKLLD 68
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 62 NIVKLLD 68
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 62 NIVKLLD 68
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 65 NIVKLLD 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 65 NIVKLLD 71
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 64 NIVKLLD 70
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 64 NIVKLLD 70
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 65 NIVKLLD 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 65 NIVKLLD 71
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 64 NIVKLLD 70
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 64 NIVKLLD 70
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 66 NIVKLLD 72
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 66 NIVKLLD 72
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 112 PYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAI 168
P + E V D + I+ IG+G F V +++ + TKK YA+K K C R +
Sbjct: 4 PVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 169 REVEHHKTFVHPNILPLL 186
+E++ + HP ++ L
Sbjct: 64 KELQIMQGLEHPFLVNLW 81
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
V D + I+ IG+G F V +++ + TKK YA+K K C R + +E++ +
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 80 FVHPNILPLL 89
HP ++ L
Sbjct: 72 LEHPFLVNLW 81
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 17 SKEAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIR 72
+E +Y + +KY +EK+GEG + V + SQ + ALK+I ++ + AIR
Sbjct: 10 GRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIR 68
Query: 73 EVEHHKTFVHPNILPLLD 90
E+ K HPNI+ L+D
Sbjct: 69 EISLLKELHHPNIVSLID 86
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+KY +EK+GEG + V + S+ + ALK+I ++ + AIRE+ K HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 181 NILPLLD 187
NI+ L+D
Sbjct: 80 NIVSLID 86
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 17 SKEAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIR 72
+E +Y + +KY +EK+GEG + V + SQ + ALK+I ++ + AIR
Sbjct: 10 GRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIR 68
Query: 73 EVEHHKTFVHPNILPLLD 90
E+ K HPNI+ L+D
Sbjct: 69 EISLLKELHHPNIVSLID 86
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+KY +EK+GEG + V + S+ + ALK+I ++ + AIRE+ K HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 181 NILPLLD 187
NI+ L+D
Sbjct: 80 NIVSLID 86
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-----AIREVE 75
V ++ +Y ++ +GEG F+TV T + A+KKI R + A+RE++
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 76 HHKTFVHPNILPLLD 90
+ HPNI+ LLD
Sbjct: 65 LLQELSHPNIIGLLD 79
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-----AIREVE 172
V ++ +Y ++ +GEG F+TV T + A+KKI R + A+RE++
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 173 HHKTFVHPNILPLLD 187
+ HPNI+ LLD
Sbjct: 65 LLQELSHPNIIGLLD 79
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
Length = 383
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
S KY + + +G G F V + ++ KR+ALKK++ +D RE++ K H N
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVLDHVN 61
Query: 85 ILPLLDHA-LTGCADP 99
I+ L+D+ TG +P
Sbjct: 62 IIKLVDYFYTTGDEEP 77
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
S KY + + +G G F V + + KR+ALKK++ +D RE++ K H N
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVLDHVN 61
Query: 182 ILPLLDHA-LTGCADP 196
I+ L+D+ TG +P
Sbjct: 62 IIKLVDYFYTTGDEEP 77
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 26 DKYYIVEK-IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
++YY +E IG G + V + T+ R A KKI + ED + +E+E K+ HPN
Sbjct: 25 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 85 ILPL 88
I+ L
Sbjct: 85 IIRL 88
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 123 DKYYIVEK-IGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
++YY +E IG G + V + T+ R A KKI + ED + +E+E K+ HPN
Sbjct: 25 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 182 ILPL 185
I+ L
Sbjct: 85 IIRL 88
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 13 GCLCSKEAVYVKS-DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQ 69
G E +Y +S +KY ++KIGEG F L++ ++ ++Y +K+I +++ +
Sbjct: 10 GVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREE 69
Query: 70 AIREVEHHKTFVHPNIL 86
+ REV HPNI+
Sbjct: 70 SRREVAVLANMKHPNIV 86
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 116 EAVYVKS-DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVE 172
E +Y +S +KY ++KIGEG F L++ + ++Y +K+I +++ ++ REV
Sbjct: 16 ENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA 75
Query: 173 HHKTFVHPNIL 183
HPNI+
Sbjct: 76 VLANMKHPNIV 86
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 26 DKYYIVEK-IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
++YY +E IG G + V + T+ R A KKI + ED + +E+E K+ HPN
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 85 ILPL 88
I+ L
Sbjct: 68 IIRL 71
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 123 DKYYIVEK-IGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
++YY +E IG G + V + T+ R A KKI + ED + +E+E K+ HPN
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 182 ILPL 185
I+ L
Sbjct: 68 IIRL 71
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + AL KI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 63 NIVKLLD 69
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + AL KI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 63 NIVKLLD 69
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + AL KI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLD 90
NI+ LLD
Sbjct: 62 NIVKLLD 68
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
+ + VEKIGEG + V + T + AL KI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 181 NILPLLD 187
NI+ LLD
Sbjct: 62 NIVKLLD 68
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 42/178 (23%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHG 63
NL FQ + + + + SD+Y +G+G F V L + T + A+K K
Sbjct: 13 NLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 72
Query: 64 REDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSD 123
+ D+ +REV+ K HPNI+ L + ++ + Y
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYE----------------------FFEDKGY---- 106
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
+Y+V ++ GG L + ++KR++ D A+ IR+V T++H N
Sbjct: 107 -FYLVGEVYTGG----ELFDEIISRKRFS--------EVDAARIIRQVLSGITYMHKN 151
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 178
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 179 HPNILPL 185
HPNI+ L
Sbjct: 91 HPNIMKL 97
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 18 KEAVYVK---SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIR 72
+E +Y + +++Y IV +G+G F V + T++ YA+K I +D + +R
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 73 EVEHHKTFVHPNILPLLD 90
EVE K HPNI+ L +
Sbjct: 71 EVELLKKLDHPNIMKLFE 88
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 179
+++Y IV +G+G F V + T++ YA+K I +D + +REVE K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 180 PNILPLLD 187
PNI+ L +
Sbjct: 81 PNIMKLFE 88
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 18 KEAVYVK---SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIR 72
+E +Y + +++Y IV +G+G F V + T++ YA+K I +D + +R
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 73 EVEHHKTFVHPNILPLLD 90
EVE K HPNI+ L +
Sbjct: 71 EVELLKKLDHPNIMKLFE 88
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 179
+++Y IV +G+G F V + T++ YA+K I +D + +REVE K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 180 PNILPLLD 187
PNI+ L +
Sbjct: 81 PNIMKLFE 88
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of
Cryptosporidium Parvum Calcium Dependent Protein Kinase
In Complex With 3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 18 KEAVYVK---SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIR 72
+E +Y + +++Y IV +G+G F V + T++ YA+K I +D + +R
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 73 EVEHHKTFVHPNILPLLD 90
EVE K HPNI+ L +
Sbjct: 71 EVELLKKLDHPNIMKLFE 88
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 179
+++Y IV +G+G F V + T++ YA+K I +D + +REVE K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 180 PNILPLLD 187
PNI+ L +
Sbjct: 81 PNIMKLFE 88
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 181
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
++ L++ T A P + + +V +
Sbjct: 79 VVNLIEICRTK-ASPYNRCKASIYLVFDF 106
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPY 113
++ L++ T A P + + +V +
Sbjct: 79 VVNLIEICRTK-ASPYNRCKASIYLVFDF 106
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 113 YYPEAVYVKSDK----YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI 168
YYP+ V +K D Y I E++G G F V + T +A K ++ D+
Sbjct: 143 YYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR 202
Query: 169 REVEHHKTFVHPNILPLLD 187
+E++ HP ++ L D
Sbjct: 203 KEIQTMSVLRHPTLVNLHD 221
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D Y I E++G G F V + T +A K ++ D+ +E++ HP +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 86 LPLLD 90
+ L D
Sbjct: 217 VNLHD 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAV------YVKSDKYYIVEKIGEGGFST 138
+L LD + P L + L Y + + +K++ Y +V+ IG G F
Sbjct: 30 LLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGE 89
Query: 139 VSLIEHSRTKKRYALK 154
V L+ H T+K YA+K
Sbjct: 90 VQLVRHKSTRKVYAMK 105
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+K++ Y +V+ IG G F V L+ H T+K YA+K
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 105
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAV------YVKSDKYYIVEKIGEGGFST 138
+L LD + P L + L Y + + +K++ Y +V+ IG G F
Sbjct: 25 LLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGE 84
Query: 139 VSLIEHSRTKKRYALK 154
V L+ H T+K YA+K
Sbjct: 85 VQLVRHKSTRKVYAMK 100
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+K++ Y +V+ IG G F V L+ H T+K YA+K
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 100
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 113 YYPEAVYVKSDK----YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI 168
YYP+ V +K D Y I E++G G F V + T +A K ++ D+
Sbjct: 37 YYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR 96
Query: 169 REVEHHKTFVHPNILPLLD 187
+E++ HP ++ L D
Sbjct: 97 KEIQTMSVLRHPTLVNLHD 115
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D Y I E++G G F V + T +A K ++ D+ +E++ HP +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 86 LPLLD 90
+ L D
Sbjct: 111 VNLHD 115
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAV------YVKSDKYYIVEKIGEGGFST 138
+L LD + P L + L Y + + +K++ Y +V+ IG G F
Sbjct: 30 LLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGE 89
Query: 139 VSLIEHSRTKKRYALK 154
V L+ H T+K YA+K
Sbjct: 90 VQLVRHKSTRKVYAMK 105
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+K++ Y +V+ IG G F V L+ H T+K YA+K
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 105
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 181
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 182 ILPLLD 187
++ L++
Sbjct: 78 VVNLIE 83
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 85 ILPLLD 90
++ L++
Sbjct: 78 VVNLIE 83
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 181
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 182 ILPLLD 187
++ L++
Sbjct: 79 VVNLIE 84
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 85 ILPLLD 90
++ L++
Sbjct: 79 VVNLIE 84
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 181
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 182 ILPLLD 187
++ L++
Sbjct: 79 VVNLIE 84
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 85 ILPLLD 90
++ L++
Sbjct: 79 VVNLIE 84
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GR 64
NL FQ C++ +D Y + E++G+G FS V + YA K I
Sbjct: 17 NLYFQXMATCTR-----FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 65 EDQAQAIREVEHHKTFVHPNILPLLD 90
D + RE + HPNI+ L D
Sbjct: 72 RDHQKLEREARICRLLKHPNIVRLHD 97
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
+D Y + E++G+G FS V + YA K I D + RE + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 90 PNIVRLHD 97
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---- 68
G + SK+ + D + I +G+G F V L Q+K AL K++ + ++A
Sbjct: 1 GAMESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEH 58
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEA 117
Q REVE HPNIL L + + ++V ++L Y P
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPRG 98
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA----QAIREVEHHKTFV 178
+ + I +G+G F V L ++K ALK ++ + ++A Q REVE
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 179 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
HPNIL L + + ++V ++L Y P
Sbjct: 72 HPNILRLYGY---------FHDATRVYLILEYAP 96
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREV 74
S + + D+Y I+E IG G + VS T ++ A+KKI + + +RE+
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 104
Query: 75 EHHKTFVHPNILPLLD 90
+ K F H NI+ + D
Sbjct: 105 KILKHFKHDNIIAIKD 120
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVHP 180
D+Y I+E IG G + VS T ++ A+KKI + + +RE++ K F H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 181 NILPLLD 187
NI+ + D
Sbjct: 114 NIIAIKD 120
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---Q 69
G + SK+ + D + I +G+G F V L Q+K ALK + E Q
Sbjct: 1 GAMESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEA 117
REVE HPNIL L + + ++V ++L Y P
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPRG 98
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 73 PNILRLYGY---------FHDATRVYLILEYAP 96
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREV 74
S + + D+Y I+E IG G + VS T ++ A+KKI + + +RE+
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 105
Query: 75 EHHKTFVHPNILPLLD 90
+ K F H NI+ + D
Sbjct: 106 KILKHFKHDNIIAIKD 121
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVHP 180
D+Y I+E IG G + VS T ++ A+KKI + + +RE++ K F H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 181 NILPLLD 187
NI+ + D
Sbjct: 115 NIIAIKD 121
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY +EKIGEG + TV ++ +T + ALK++ ++ + A+RE+ K H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPY 113
I+ L D VL+S ++ +V +
Sbjct: 63 IVRLHD---------VLHSDKKLTLVFEF 82
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 181
KY +EKIGEG + TV ++ T + ALK++ ++ + A+RE+ K H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D VL+S ++ +V +
Sbjct: 63 IVRLHD---------VLHSDKKLTLVFEF 82
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---Q 69
G + SK+ + D + I +G+G F V L Q+K ALK + E Q
Sbjct: 1 GAMESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
REVE HPNIL L + + ++V ++L Y P
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 96
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 73 PNILRLYGY---------FHDATRVYLILEYAP 96
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRY-ALKKIICHGREDQA--QAIREV 74
K+ + +Y V +IGEG + V + R+ ALK++ E+ IREV
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 75 ---EHHKTFVHPNILPLLD 90
H +TF HPN++ L D
Sbjct: 63 AVLRHLETFEHPNVVRLFD 81
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRY-ALKKIICHGREDQA--QAIREV---EHHKTF 177
+Y V +IGEG + V + R+ ALK++ E+ IREV H +TF
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 178 VHPNILPLLD 187
HPN++ L D
Sbjct: 72 EHPNVVRLFD 81
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY +EKIGEG + TV ++ +T + ALK++ ++ + A+RE+ K H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPY 113
I+ L D VL+S ++ +V +
Sbjct: 63 IVRLHD---------VLHSDKKLTLVFEF 82
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 181
KY +EKIGEG + TV ++ T + ALK++ ++ + A+RE+ K H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPY 210
I+ L D VL+S ++ +V +
Sbjct: 63 IVRLHD---------VLHSDKKLTLVFEF 82
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRY-ALKKIICHGREDQA--QAIREV 74
K+ + +Y V +IGEG + V + R+ ALK++ E+ IREV
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 75 ---EHHKTFVHPNILPLLD 90
H +TF HPN++ L D
Sbjct: 63 AVLRHLETFEHPNVVRLFD 81
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRY-ALKKIICHGREDQA--QAIREV---EHHKTF 177
+Y V +IGEG + V + R+ ALK++ E+ IREV H +TF
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 178 VHPNILPLLD 187
HPN++ L D
Sbjct: 72 EHPNVVRLFD 81
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With
The Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRY-ALKKIICHGREDQA--QAIREV 74
K+ + +Y V +IGEG + V + R+ ALK++ E+ IREV
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 75 ---EHHKTFVHPNILPLLD 90
H +TF HPN++ L D
Sbjct: 63 AVLRHLETFEHPNVVRLFD 81
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRY-ALKKIICHGREDQA--QAIREV---EHHKTF 177
+Y V +IGEG + V + R+ ALK++ E+ IREV H +TF
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 178 VHPNILPLLD 187
HPN++ L D
Sbjct: 72 EHPNVVRLFD 81
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 82
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 83 PNILPLLD 90
NI+ L D
Sbjct: 60 SNIVKLYD 67
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 179
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 180 PNILPLLD 187
NI+ L D
Sbjct: 60 SNIVKLYD 67
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 82
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 83 PNILPLLD 90
NI+ L D
Sbjct: 60 SNIVKLYD 67
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 179
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 180 PNILPLLD 187
NI+ L D
Sbjct: 60 SNIVKLYD 67
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 82
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 83 PNILPLLD 90
NI+ L D
Sbjct: 60 SNIVKLYD 67
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 179
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 180 PNILPLLD 187
NI+ L D
Sbjct: 60 SNIVKLYD 67
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + IV +G+G F V L Q K ALK + E + Q RE+E H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 83 PNILPLLDH 91
PNIL + ++
Sbjct: 74 PNILRMYNY 82
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
D + IV +G+G F V L + K ALK + E + Q RE+E H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 180 PNILPLLDH 188
PNIL + ++
Sbjct: 74 PNILRMYNY 82
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
Length = 319
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 85 ILPLLD 90
I+ L +
Sbjct: 68 IVKLFE 73
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 182 ILPLLD 187
I+ L +
Sbjct: 68 IVKLFE 73
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
+K++ Y +V+ IG G F V L+ H ++K YA+K K R D A E +
Sbjct: 72 MKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 131
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
P ++ L CA + MV+ Y P
Sbjct: 132 ANSPWVVQLF------CA---FQDDKYLYMVMEYMP 158
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 25/163 (15%)
Query: 66 DQAQAIREVEHHKTFVHP----NILPLLDHALTGCAD---PVLNSTSQVLMVLPYYPEAV 118
D A A R+ + P N+ LLD + D P L + L Y + V
Sbjct: 5 DGAGASRQRKLEALIRDPRSPINVESLLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIV 64
Query: 119 ------YVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIR 169
+K++ Y +V+ IG G F V L+ H ++K YA+K K R D A
Sbjct: 65 KKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWE 124
Query: 170 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
E + P ++ L CA + MV+ Y P
Sbjct: 125 ERDIMAFANSPWVVQLF------CA---FQDDKYLYMVMEYMP 158
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLD 90
I+ L +
Sbjct: 75 IVKLFE 80
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A+K II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 182 ILPLLD 187
I+ L +
Sbjct: 75 IVKLFE 80
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLD 90
I+ L +
Sbjct: 75 IVKLFE 80
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A+K II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 182 ILPLLD 187
I+ L +
Sbjct: 75 IVKLFE 80
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLD 90
I+ L +
Sbjct: 75 IVKLFE 80
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A+K II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 182 ILPLLD 187
I+ L +
Sbjct: 75 IVKLFE 80
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ--- 69
G + S E ++ + Y +++ IG+G F+ V L H T + A+K I D+ Q
Sbjct: 1 GAMGSDEQPHIGN--YRLLKTIGKGNFAKVKLARHILTGREVAIKII------DKTQLNP 52
Query: 70 -----AIREVEHHKTFVHPNILPLLD 90
REV K HPNI+ L +
Sbjct: 53 TSLQKLFREVRIMKILNHPNIVKLFE 78
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQA--------IREVEHHKT 176
Y +++ IG+G F+ V L H T + A+K I D+ Q REV K
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKII------DKTQLNPTSLQKLFREVRIMKI 67
Query: 177 FVHPNILPLLD 187
HPNI+ L +
Sbjct: 68 LNHPNIVKLFE 78
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+KY + KIGEG + V + T + A+KK + +D + A+RE+ K H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQLKH 61
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKY 125
PN++ LL+ V ++ +V Y V + D+Y
Sbjct: 62 PNLVNLLE---------VFRRKRRLHLVFEYCDHTVLHELDRY 95
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 179
+KY + KIGEG + V + T + A+KK + +D + A+RE+ K H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQLKH 61
Query: 180 PNILPLLD 187
PN++ LL+
Sbjct: 62 PNLVNLLE 69
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 85 ILPLLD 90
I+ L +
Sbjct: 75 IVKLFE 80
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 182 ILPLLD 187
I+ L +
Sbjct: 75 IVKLFE 80
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ IG G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ IG G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++E+EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKEIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++E+EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKEIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ IG G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ IG G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++E+EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKEIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++E+EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKEIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ IG G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ IG G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ------ 69
C+ E ++ + Y +++ IG+G F+ V L H T + A+K I D+ Q
Sbjct: 7 CADEQPHIGN--YRLLKTIGKGNFAKVKLARHILTGREVAIKII------DKTQLNPTSL 58
Query: 70 --AIREVEHHKTFVHPNILPLLD 90
REV K HPNI+ L +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFE 81
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQA--------IREVEHHKT 176
Y +++ IG+G F+ V L H T + A+K I D+ Q REV K
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKII------DKTQLNPTSLQKLFREVRIMKI 70
Query: 177 FVHPNILPLLD 187
HPNI+ L +
Sbjct: 71 LNHPNIVKLFE 81
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 42/160 (26%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTVSL 141
HPNI+ L + ++ + Y +Y+V ++ GG L
Sbjct: 85 HPNIMKLYE----------------------FFEDKGY-----FYLVGEVYTGG----EL 113
Query: 142 IEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
+ ++KR++ D A+ IR+V T++H N
Sbjct: 114 FDEIISRKRFS--------EVDAARIIRQVLSGITYMHKN 145
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 178
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 179 HPNILPL 185
HPNI+ L
Sbjct: 85 HPNIMKL 91
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH----KTF 80
SD Y + E++G+G FS V H T +A K I + ++ A+ +++E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK--IINTKKLSARDFQKLEREARICRKL 85
Query: 81 VHPNILPLLD 90
HPNI+ L D
Sbjct: 86 QHPNIVRLHD 95
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH----KTF 177
SD Y + E++G+G FS V H T +A K I + ++ A+ +++E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK--IINTKKLSARDFQKLEREARICRKL 85
Query: 178 VHPNILPLLD 187
HPNI+ L D
Sbjct: 86 QHPNIVRLHD 95
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ +II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLD 90
I+ L +
Sbjct: 75 IVKLFE 80
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A++ II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 182 ILPLLD 187
I+ L +
Sbjct: 75 IVKLFE 80
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
SD Y + E++G+G FS V H T +A K I D + RE + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 64 PNIVRLHD 71
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
SD Y + E++G+G FS V H T +A K I D + RE + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 64 PNIVRLHD 71
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---Q 69
G SK+ + D + I +G+G F V L Q+K ALK + E Q
Sbjct: 1 GSHMSKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
REVE HPNIL L + + ++V ++L Y P
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 96
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 73 PNILRLYGY---------FHDATRVYLILEYAP 96
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ +II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLD 90
I+ L +
Sbjct: 75 IVKLFE 80
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 181
Y +++ IG+G F+ V L H T K A++ II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 182 ILPLLD 187
I+ L +
Sbjct: 75 IVKLFE 80
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 87
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 42/160 (26%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTVSL 141
HPNI+ L + ++ + Y +Y+V ++ GG L
Sbjct: 108 HPNIMKLYE----------------------FFEDKGY-----FYLVGEVYTGG----EL 136
Query: 142 IEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
+ ++KR++ D A+ IR+V T++H N
Sbjct: 137 FDEIISRKRFS--------EVDAARIIRQVLSGITYMHKN 168
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 178
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 179 HPNILPL 185
HPNI+ L
Sbjct: 108 HPNIMKL 114
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 145
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 145
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
SD Y + E++G+G FS V H T +A K I D + RE + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 65 PNIVRLHD 72
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
SD Y + E++G+G FS V H T +A K I D + RE + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 65 PNIVRLHD 72
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
SD Y + E++G+G FS V H T +A K I D + RE + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 65 PNIVRLHD 72
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
SD Y + E++G+G FS V H T +A K I D + RE + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 65 PNIVRLHD 72
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 42/160 (26%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTVSL 141
HPNI+ L + ++ + Y +Y+V ++ GG L
Sbjct: 109 HPNIMKLYE----------------------FFEDKGY-----FYLVGEVYTGG----EL 137
Query: 142 IEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
+ ++KR++ D A+ IR+V T++H N
Sbjct: 138 FDEIISRKRFS--------EVDAARIIRQVLSGITYMHKN 169
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 178
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 179 HPNILPL 185
HPNI+ L
Sbjct: 109 HPNIMKL 115
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 112 PYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIR-E 170
P + +A ++ D Y + +G G FS V L E RT+K A+K I E + ++ E
Sbjct: 8 PRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 171 VEHHKTFVHPNILPLLD 187
+ HPNI+ L D
Sbjct: 67 IAVLHKIKHPNIVALDD 83
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
D Y + +G G FS V L E +T+K A+K I E + ++ E+ HPN
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 85 ILPLLD 90
I+ L D
Sbjct: 78 IVALDD 83
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 112 PYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIR-E 170
P + +A ++ D Y + +G G FS V L E RT+K A+K I E + ++ E
Sbjct: 8 PRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 171 VEHHKTFVHPNILPLLD 187
+ HPNI+ L D
Sbjct: 67 IAVLHKIKHPNIVALDD 83
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
D Y + +G G FS V L E +T+K A+K I E + ++ E+ HPN
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 85 ILPLLD 90
I+ L D
Sbjct: 78 IVALDD 83
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 112 PYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIR-E 170
P + +A ++ D Y + +G G FS V L E RT+K A+K I E + ++ E
Sbjct: 8 PRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 171 VEHHKTFVHPNILPLLD 187
+ HPNI+ L D
Sbjct: 67 IAVLHKIKHPNIVALDD 83
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
D Y + +G G FS V L E +T+K A+K I E + ++ E+ HPN
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 85 ILPLLD 90
I+ L D
Sbjct: 78 IVALDD 83
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 87
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 125
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 125
>pdb|3G0S|A Chain A, Dihydrodipicolinate Synthase From Salmonella Typhimurium
Lt2
pdb|3G0S|B Chain B, Dihydrodipicolinate Synthase From Salmonella Typhimurium
Lt2
Length = 316
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + + + D ++ + GG +S+ + ++ + K+
Sbjct: 188 TGNLTRVHQIKELVSDDFILLSGDDASALDFMQLGGHGVISVTANVAAREMADMCKLAAE 247
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G+ +A+AI + H+K FV PN +P+
Sbjct: 248 GQFAEARAINQRLMPLHNKLFVEPNPIPV 276
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVE---HH 174
+ + D ++ + GG +S+ + ++ + K+ G+ +A+AI + H+
Sbjct: 206 ILLSGDDASALDFMQLGGHGVISVTANVAAREMADMCKLAAEGQFAEARAINQRLMPLHN 265
Query: 175 KTFVHPNILPL 185
K FV PN +P+
Sbjct: 266 KLFVEPNPIPV 276
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D + I+ ++G+G F V ++ +T A K I E+ + E++ + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 86 LPLLD 90
+ LLD
Sbjct: 97 VKLLD 101
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D + I+ ++G+G F V ++ T A K I E+ + E++ + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 183 LPLLD 187
+ LLD
Sbjct: 97 VKLLD 101
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D + I+ ++G+G F V ++ +T A K I E+ + E++ + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 86 LPLLD 90
+ LLD
Sbjct: 97 VKLLD 101
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D + I+ ++G+G F V ++ T A K I E+ + E++ + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 183 LPLLD 187
+ LLD
Sbjct: 97 VKLLD 101
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D + I+ ++G+G F V ++ +T A K I E+ + E++ + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 86 LPLLD 90
+ LLD
Sbjct: 97 VKLLD 101
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D + I+ ++G+G F V ++ T A K I E+ + E++ + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 183 LPLLD 187
+ LLD
Sbjct: 97 VKLLD 101
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 113 YYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVE 172
Y+ V+ SD Y + E IG G +S H T YA+ K+I + D ++ I +
Sbjct: 19 YFQSMVF--SDGYVVKETIGVGSYSECKRCVHKATNMEYAV-KVIDKSKRDPSEEIEILL 75
Query: 173 HHKTFVHPNILPLLD 187
+ HPNI+ L D
Sbjct: 76 RYGQ--HPNIITLKD 88
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V SD Y + E IG G +S H T YA+ K+I + D ++ I + + H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-KVIDKSKRDPSEEIEILLRYGQ--H 80
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 81 PNIITLKD 88
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
E +G+G F + H +T + +K++I E Q ++EV+ + HPN+L +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P ++ SD + E +G+G F + H T + +K++I E Q ++EV+
Sbjct: 3 PHRIFRPSDLIH-GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM 61
Query: 175 KTFVHPNILPLL 186
+ HPN+L +
Sbjct: 62 RCLEHPNVLKFI 73
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 112 PYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAI 168
P + +A ++ D Y + +G G FS V L E RT+K A+K K G+E +
Sbjct: 8 PRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 169 REVEHHKTFVHPNILPLLD 187
V H HPNI+ L D
Sbjct: 67 IAVLH--KIKHPNIVALDD 83
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVH 82
D Y + +G G FS V L E +T+K A+K K G+E + V H H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH--KIKH 75
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 76 PNIVALDD 83
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+D+Y + E++G+G FS V T + YA K I D + RE + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 63 PNIVRLHD 70
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
+D+Y + E++G+G FS V T + YA K I D + RE + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 63 PNIVRLHD 70
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+D+Y + E++G+G FS V T + YA K I D + RE + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 63 PNIVRLHD 70
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
+D+Y + E++G+G FS V T + YA K I D + RE + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 63 PNIVRLHD 70
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V SD Y + E IG G +S H T YA+ K+I + D ++ I + + H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-KVIDKSKRDPSEEIEILLRYGQ--H 80
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 81 PNIITLKD 88
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 179
V SD Y + E IG G +S H T YA+ K+I + D ++ I + + H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-KVIDKSKRDPSEEIEILLRYGQ--H 80
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 81 PNIITLKD 88
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 80
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 110
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 80
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 110
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---Q 69
G + SK + + + I +G+G F V L Q+K ALK + E Q
Sbjct: 1 GAMGSKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 58
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
REVE HPNIL L + + ++V ++L Y P
Sbjct: 59 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 95
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 72 PNILRLYGY---------FHDATRVYLILEYAP 95
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
V ++ D + I++ IG G FS V++++ QT + YA+K
Sbjct: 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMK 92
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK 154
V ++ D + I++ IG G FS V++++ +T + YA+K
Sbjct: 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMK 92
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated
Kinase (gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated
Kinase (gak)
Length = 337
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV-HPNILPLLDHA 92
+ EGGF+ V + + + YALK+++ + E I+EV K HPNI+ A
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 93 LTG 95
G
Sbjct: 96 SIG 98
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFV-HPNILPLLDHA 189
+ EGGF+ V + + + YALK+++ + E I+EV K HPNI+ A
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 190 LTG 192
G
Sbjct: 96 SIG 98
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
VE HPNIL L + + ++V ++L Y P
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 94
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
VE HPNIL L + + ++V ++L Y P
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 94
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIREVEHHKTFVHPN 84
+ Y ++K+GEG ++TV + T ALK+I + H AIREV K H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 85 ILPLLD 90
I+ L D
Sbjct: 62 IVTLHD 67
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI-ICHGREDQAQAIREVEHHKTFVHPN 181
+ Y ++K+GEG ++TV + T ALK+I + H AIREV K H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 182 ILPLLD 187
I+ L D
Sbjct: 62 IVTLHD 67
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
VE HPNIL L + + ++V ++L Y P
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 94
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 1 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 58
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 59 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 92
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 69 PNILRLYGY---------FHDATRVYLILEYAP 92
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 1 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 58
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 59 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 92
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 69 PNILRLYGY---------FHDATRVYLILEYAP 92
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 2 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 59
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 60 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 93
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA----QAIREVEHHKTFV 178
+ + I +G+G F V L ++K ALK ++ + ++A Q REVE
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 179 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
HPNIL L + + ++V ++L Y P
Sbjct: 69 HPNILRLYGY---------FHDATRVYLILEYAP 93
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 2 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 59
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 60 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 93
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA----QAIREVEHHKTFV 178
+ + I +G+G F V L ++K ALK ++ + ++A Q REVE
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 179 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
HPNIL L + + ++V ++L Y P
Sbjct: 69 HPNILRLYGY---------FHDATRVYLILEYAP 93
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 60
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 61 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 94
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA----QAIREVEHHKTFV 178
+ + I +G+G F V L ++K ALK ++ + ++A Q REVE
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 179 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
HPNIL L + + ++V ++L Y P
Sbjct: 70 HPNILRLYGY---------FHDATRVYLILEYAP 94
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAP 94
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E Q RE
Sbjct: 5 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
VE HPNIL L + + ++V ++L Y P
Sbjct: 64 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 96
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 73 PNILRLYGY---------FHDATRVYLILEYAP 96
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 67 PNILRLYGY---------FHDATRVYLILEYAP 90
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 67 PNILRLYGY---------FHDATRVYLILEYAP 90
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
D+Y + K+GEG + V + T + A+K+I E+ AIREV K H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 84 NILPL 88
NI+ L
Sbjct: 94 NIIEL 98
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 180
D+Y + K+GEG + V + T + A+K+I E+ AIREV K H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 181 NILPL 185
NI+ L
Sbjct: 94 NIIEL 98
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAP 91
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 17 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 74
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 75 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 108
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA----QAIREVEHHKTFV 178
+ + I +G+G F V L ++K ALK ++ + ++A Q REVE
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 179 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
HPNIL L + + ++V ++L Y P
Sbjct: 84 HPNILRLYGY---------FHDATRVYLILEYAP 108
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---Q 69
G L SK + + + I +G+G F V L Q+K ALK + E Q
Sbjct: 1 GPLGSKRQWTL--EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ 58
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
REVE HPNIL L + + ++V ++L Y P
Sbjct: 59 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 95
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 72 PNILRLYGY---------FHDATRVYLILEYAP 95
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---Q 69
G L SK + + + I +G+G F V L Q+K ALK + E Q
Sbjct: 1 GPLGSKRQWTL--EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ 58
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
REVE HPNIL L + + ++V ++L Y P
Sbjct: 59 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 95
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 72 PNILRLYGY---------FHDATRVYLILEYAP 95
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIREVEHHKTFV 81
+ + I +G+G F V L Q+K AL K++ + ++A Q REVE
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
HPNIL L + + ++V ++L Y P
Sbjct: 68 HPNILRLYGY---------FHDATRVYLILEYAP 92
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 69 PNILRLYGY---------FHDATRVYLILEYAP 92
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 26 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 83
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 84 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 117
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 94 PNILRLYGY---------FHDATRVYLILEYAP 117
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
L ++ + S + MV+ Y P
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA----QAIR 72
SK+ + D + I +G+G F V L Q+K AL K++ + ++A Q R
Sbjct: 26 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRR 83
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
EVE HPNIL L + + ++V ++L Y P
Sbjct: 84 EVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAP 117
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L ++K ALK + E Q REVE H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 94 PNILRLYGY---------FHDATRVYLILEYAP 117
>pdb|2OJP|A Chain A, The Crystal Structure Of A Dimeric Mutant Of
Dihydrodipicolinate Synthase From E.Coli- Dhdps-L197y
pdb|2OJP|B Chain B, The Crystal Structure Of A Dimeric Mutant Of
Dihydrodipicolinate Synthase From E.Coli- Dhdps-L197y
Length = 292
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I E H+K FV PN +P+
Sbjct: 224 GHFAEARVINERLMPLHNKLFVEPNPIPV 252
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVE---HH 174
V + D ++ + GG +S+ + + + K+ G +A+ I E H+
Sbjct: 182 VLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINERLMPLHN 241
Query: 175 KTFVHPNILPL 185
K FV PN +P+
Sbjct: 242 KLFVEPNPIPV 252
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + I +G+G F V L Q K ALK + E + Q RE+E H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 83 PNILPLLDH 91
PNIL + ++
Sbjct: 75 PNILRMYNY 83
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
D + I +G+G F V L + K ALK + E + Q RE+E H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 180 PNILPLLDH 188
PNIL + ++
Sbjct: 75 PNILRMYNY 83
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And
Inhibition By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And
Inhibition By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + I +G+G F V L Q K ALK + E + Q RE+E H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 83 PNILPLLDH 91
PNIL + ++
Sbjct: 74 PNILRMYNY 82
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
D + I +G+G F V L + K ALK + E + Q RE+E H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 180 PNILPLLDH 188
PNIL + ++
Sbjct: 74 PNILRMYNY 82
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ-AQAIREVEHHKTFVHP 83
S ++ +EK+G G ++TV + T ALK++ E + AIRE+ K H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 84 NILPLLD 90
NI+ L D
Sbjct: 64 NIVRLYD 70
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQ-AQAIREVEHHKTFVHP 180
S ++ +EK+G G ++TV + T ALK++ E + AIRE+ K H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 181 NILPLLD 187
NI+ L D
Sbjct: 64 NIVRLYD 70
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ--------AIREVEHHKT 79
Y + + IG+G F+ V L H T + A+K I D+ Q REV K
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKII------DKTQLNPTSLQKLFREVRIMKI 70
Query: 80 FVHPNILPLLD 90
HPNI+ L +
Sbjct: 71 LNHPNIVKLFE 81
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQA--------IREVEHHKT 176
Y + + IG+G F+ V L H T + A+K I D+ Q REV K
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKII------DKTQLNPTSLQKLFREVRIMKI 70
Query: 177 FVHPNILPLLD 187
HPNI+ L +
Sbjct: 71 LNHPNIVKLFE 81
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI----- 71
SK VK Y + + +G G F V + EH T + A+K I + ++ ++ +
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK--ILNRQKIRSLDVVGKIK 59
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 113
RE+++ K F HP+I+ L V+++ + MV+ Y
Sbjct: 60 REIQNLKLFRHPHIIKLYQ---------VISTPTDFFMVMEY 92
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI-----REVEHH 174
VK Y + + +G G F V + EH T + A+K I + ++ ++ + RE+++
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK--ILNRQKIRSLDVVGKIKREIQNL 65
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
K F HP+I+ L V+++ + MV+ Y
Sbjct: 66 KLFRHPHIIKLYQ---------VISTPTDFFMVMEY 92
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L Q K ALK + E Q REVE H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + ++V ++L Y P
Sbjct: 65 PNILRLYGY---------FHDATRVYLILEYAP 88
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L + K ALK + E Q REVE H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + ++V ++L Y P
Sbjct: 65 PNILRLYGY---------FHDATRVYLILEYAP 88
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI----- 71
SK VK Y + + +G G F V + EH T + A+K I + ++ ++ +
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK--ILNRQKIRSLDVVGKIK 59
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 113
RE+++ K F HP+I+ L V+++ + MV+ Y
Sbjct: 60 REIQNLKLFRHPHIIKLYQ---------VISTPTDFFMVMEY 92
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI-----REVEHH 174
VK Y + + +G G F V + EH T + A+K I + ++ ++ + RE+++
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK--ILNRQKIRSLDVVGKIKREIQNL 65
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
K F HP+I+ L V+++ + MV+ Y
Sbjct: 66 KLFRHPHIIKLYQ---------VISTPTDFFMVMEY 92
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ + +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
++ + S + MVL Y P
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAP 125
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ + +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
++ + S + MVL Y P
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAP 125
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 13 GCLCSKEAVYVKS---DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGR 64
G E +Y +S D Y + E++G G F+ V T K YA K ++ R
Sbjct: 10 GVDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRR 69
Query: 65 EDQAQAI-REVEHHKTFVHPNILPLLD 90
+ I REV + HPNI+ L D
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHD 96
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 116 EAVYVKS---DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK-----KIICHGREDQAQA 167
E +Y +S D Y + E++G G F+ V T K YA K ++ R +
Sbjct: 16 ENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREE 75
Query: 168 I-REVEHHKTFVHPNILPLLD 187
I REV + HPNI+ L D
Sbjct: 76 IEREVNILREIRHPNIITLHD 96
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In
Complex With Atp
Length = 306
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 87 PLLDHALTG 95
LD L G
Sbjct: 82 NYLDSYLVG 90
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 183
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 184 PLLDHALTG 192
LD L G
Sbjct: 82 NYLDSYLVG 90
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 87 PLLDHALTG 95
LD L G
Sbjct: 82 NYLDSYLVG 90
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 183
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 184 PLLDHALTG 192
LD L G
Sbjct: 82 NYLDSYLVG 90
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 87 PLLDHALTG 95
LD L G
Sbjct: 81 NYLDSYLVG 89
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 183
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 184 PLLDHALTG 192
LD L G
Sbjct: 81 NYLDSYLVG 89
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The
Ruthenium Phthalimide Complex
Length = 297
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 87 PLLDHALTG 95
LD L G
Sbjct: 81 NYLDSYLVG 89
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 183
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 184 PLLDHALTG 192
LD L G
Sbjct: 81 NYLDSYLVG 89
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 87 PLLDHALTG 95
LD L G
Sbjct: 81 NYLDSYLVG 89
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 183
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 184 PLLDHALTG 192
LD L G
Sbjct: 81 NYLDSYLVG 89
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-QAIREVEH 76
K VY S + + +GEG + V H T + A+KKI + A + +RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 77 HKTFVHPNILPLLD 90
K F H NI+ + +
Sbjct: 63 LKHFKHENIITIFN 76
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA-QAIREVEHHKT 176
VY S + + +GEG + V H T + A+KKI + A + +RE++ K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 177 FVHPNILPLLD 187
F H NI+ + +
Sbjct: 66 FKHENIITIFN 76
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-QAIREVEH 76
K VY S + + +GEG + V H T + A+KKI + A + +RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 77 HKTFVHPNILPLLD 90
K F H NI+ + +
Sbjct: 63 LKHFKHENIITIFN 76
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA-QAIREVEHHKT 176
VY S + + +GEG + V H T + A+KKI + A + +RE++ K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 177 FVHPNILPLLD 187
F H NI+ + +
Sbjct: 66 FKHENIITIFN 76
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-QAIREVEH 76
K VY S + + +GEG + V H T + A+KKI + A + +RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 77 HKTFVHPNILPLLD 90
K F H NI+ + +
Sbjct: 63 LKHFKHENIITIFN 76
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA-QAIREVEHHKT 176
VY S + + +GEG + V H T + A+KKI + A + +RE++ K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 177 FVHPNILPLLD 187
F H NI+ + +
Sbjct: 66 FKHENIITIFN 76
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
+ + I +G+G F V L +K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
PNIL L + + +++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDSTRVYLILEYAP 91
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
+ + I +G+G F V L +K ALK + E Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 180 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
PNIL L + + +++V ++L Y P
Sbjct: 68 PNILRLYGY---------FHDSTRVYLILEYAP 91
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPNI 182
Y ++ +G G + V RT + A+KK+ + + +A RE+ K H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
+ LLD D L+ + +V+P+
Sbjct: 87 IGLLD---VFTPDETLDDFTDFYLVMPF 111
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPNI 85
Y ++ +G G + V +T + A+KK+ + + +A RE+ K H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
+ LLD D L+ + +V+P+
Sbjct: 87 IGLLD---VFTPDETLDDFTDFYLVMPF 111
>pdb|2A6L|A Chain A, Dihydrodipicolinate Synthase (E. Coli)- Mutant R138h
pdb|2A6L|B Chain B, Dihydrodipicolinate Synthase (E. Coli)- Mutant R138h
Length = 292
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|3DEN|A Chain A, Structure Of E. Coli Dhdps Mutant Y107w
pdb|3DEN|B Chain B, Structure Of E. Coli Dhdps Mutant Y107w
Length = 292
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|2PUR|A Chain A, Structure Of Dihydrodipicolinate Synthase Mutant Thr44ser
At 1.7 A.
pdb|2PUR|B Chain B, Structure Of Dihydrodipicolinate Synthase Mutant Thr44ser
At 1.7 A
Length = 292
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|3C0J|A Chain A, Structure Of E. Coli Dihydrodipicolinate Synthase
Complexed With Hydroxypyruvate
pdb|3C0J|B Chain B, Structure Of E. Coli Dihydrodipicolinate Synthase
Complexed With Hydroxypyruvate
pdb|3DU0|A Chain A, E. Coli Dihydrodipicolinate Synthase With First Substrate,
Pyruvate, Bound In Active Site
pdb|3DU0|B Chain B, E. Coli Dihydrodipicolinate Synthase With First Substrate,
Pyruvate, Bound In Active Site
pdb|4EOU|A Chain A, Crystal Structure Of E. Coli Dihydrodipicolinate Synthase
With Pyruvate And Succinic Semi-Aldehyde Bound In Active
Site
pdb|4EOU|B Chain B, Crystal Structure Of E. Coli Dihydrodipicolinate Synthase
With Pyruvate And Succinic Semi-Aldehyde Bound In Active
Site
Length = 292
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|2A6N|A Chain A, Dihydrodipicolinate Synthase (E. Coli)- Mutant R138a
pdb|2A6N|B Chain B, Dihydrodipicolinate Synthase (E. Coli)- Mutant R138a
Length = 292
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|1S5W|A Chain A, Crystal Structure Analysis Of A Mutant Of
Dihydrodipicolinate Synthase--Residue Tyr133 To Phe133
pdb|1S5W|B Chain B, Crystal Structure Analysis Of A Mutant Of
Dihydrodipicolinate Synthase--Residue Tyr133 To Phe133
Length = 292
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|1S5V|A Chain A, Crystal Structure Analysis Of A Mutant Of
Dihydrodipicolinate Synthase--Residue Tyr107 To Phe107
pdb|1S5V|B Chain B, Crystal Structure Analysis Of A Mutant Of
Dihydrodipicolinate Synthase--Residue Tyr107 To Phe107
Length = 292
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|1S5T|A Chain A, Crystal Structure Analysis Of A Mutant Of
Dihydrodipicolinate Synthase--Residue Thr44 To Val44
pdb|1S5T|B Chain B, Crystal Structure Analysis Of A Mutant Of
Dihydrodipicolinate Synthase--Residue Thr44 To Val44
Length = 292
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|3I7Q|A Chain A, Dihydrodipicolinate Synthase Mutant - K161a
pdb|3I7Q|B Chain B, Dihydrodipicolinate Synthase Mutant - K161a
pdb|3I7R|A Chain A, Dihydrodipicolinate Synthase - K161r
pdb|3I7R|B Chain B, Dihydrodipicolinate Synthase - K161r
pdb|3I7S|A Chain A, Dihydrodipicolinate Synthase Mutant - K161a - With The
Substrate Pyruvate Bound In The Active Site.
pdb|3I7S|B Chain B, Dihydrodipicolinate Synthase Mutant - K161a - With The
Substrate Pyruvate Bound In The Active Site
Length = 292
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|1DHP|A Chain A, Dihydrodipicolinate Synthase
pdb|1DHP|B Chain B, Dihydrodipicolinate Synthase
pdb|1YXC|A Chain A, Structure Of E. Coli Dihydrodipicolinate Synthase To 1.9 A
pdb|1YXC|B Chain B, Structure Of E. Coli Dihydrodipicolinate Synthase To 1.9 A
pdb|1YXD|A Chain A, Structure Of E. Coli Dihydrodipicolinate Synthase Bound
With Allosteric Inhibitor (S)-Lysine To 2.0 A
pdb|1YXD|B Chain B, Structure Of E. Coli Dihydrodipicolinate Synthase Bound
With Allosteric Inhibitor (S)-Lysine To 2.0 A
pdb|2ATS|A Chain A, Dihydrodipicolinate Synthase Co-Crystallised With
(S)-Lysine
pdb|2ATS|B Chain B, Dihydrodipicolinate Synthase Co-Crystallised With
(S)-Lysine
Length = 292
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I + H+K FV PN +P+
Sbjct: 224 GHFAEARVINQRLMPLHNKLFVEPNPIPV 252
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 42/160 (26%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTVSL 141
HPNI L + ++ + Y +Y+V ++ GG L
Sbjct: 85 HPNIXKLYE----------------------FFEDKGY-----FYLVGEVYTGG----EL 113
Query: 142 IEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 181
+ ++KR++ D A+ IR+V T+ H N
Sbjct: 114 FDEIISRKRFS--------EVDAARIIRQVLSGITYXHKN 145
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 178
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 179 HPNILPL 185
HPNI L
Sbjct: 85 HPNIXKL 91
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 124 KYY-IVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 181
KYY + E IG GGF+ V L H T + A+K + + I+ E+E K H +
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 182 ILPLLDHALTGCADPVLNSTSQVLMVLPYYP 212
I L VL + +++ MVL Y P
Sbjct: 70 ICQLYH---------VLETANKIFMVLEYCP 91
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 27 KYY-IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
KYY + E IG GGF+ V L H T + A+K + + I+ E+E K H +
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
I L VL + +++ MVL Y P
Sbjct: 70 ICQLYH---------VLETANKIFMVLEYCP 91
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Query: 18 KEAVYVK---SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI--- 71
+E +Y + D + K+G G F V L+E ++ L+++I +D++Q
Sbjct: 11 RENLYFQGTIDDLFIFKRKLGSGAFGDVHLVE----ERSSGLERVIKTINKDRSQVPMEQ 66
Query: 72 --REVEHHKTFVHPNILPLLD 90
E+E K+ HPNI+ + +
Sbjct: 67 IEAEIEVLKSLDHPNIIKIFE 87
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI-----REVEHHKT 176
D + K+G G F V L+E ++ L+++I +D++Q E+E K+
Sbjct: 21 DDLFIFKRKLGSGAFGDVHLVE----ERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 177 FVHPNILPLLD 187
HPNI+ + +
Sbjct: 77 LDHPNIIKIFE 87
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
++ + ++ K+G+G F V L +H KK YA+K
Sbjct: 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVK 66
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK 154
++ + ++ K+G+G F V L +H KK YA+K
Sbjct: 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVK 66
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 13 GCLCSKEAVYVKS-DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-- 69
G E +Y +S +KY + +GEG + V + T + A+KK + + +
Sbjct: 11 GVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI 70
Query: 70 AIREVEHHKTFVHPNILPLLD 90
A+RE++ K H N++ LL+
Sbjct: 71 AMREIKLLKQLRHENLVNLLE 91
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 116 EAVYVKS-DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ--AIREVE 172
E +Y +S +KY + +GEG + V + T + A+KK + + + A+RE++
Sbjct: 17 ENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 173 HHKTFVHPNILPLLD 187
K H N++ LL+
Sbjct: 77 LLKQLRHENLVNLLE 91
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI 59
+Y+++ K+G G FSTV L Q K+ A+K +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV 64
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI 156
+Y+++ K+G G FSTV L + K+ A+K +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV 64
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI----REVEHHK 78
VK Y + + +G G F V + +H T + A+K I+ + + RE+++ K
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLK 71
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 113
F HP+I+ L V+++ S + MV+ Y
Sbjct: 72 LFRHPHIIKLYQ---------VISTPSDIFMVMEY 97
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI----REVEHHK 175
VK Y + + +G G F V + +H T + A+K I+ + + RE+++ K
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLK 71
Query: 176 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
F HP+I+ L V+++ S + MV+ Y
Sbjct: 72 LFRHPHIIKLYQ---------VISTPSDIFMVMEY 97
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV---H 82
D++ + G+G F TV L + T A+KK+I +D RE++ + H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI----QDPRFRNRELQIMQDLAVLHH 78
Query: 83 PNILPLLDHALT 94
PNI+ L + T
Sbjct: 79 PNIVQLQSYFYT 90
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFV---H 179
D++ + G+G F TV L + T A+KK+I +D RE++ + H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI----QDPRFRNRELQIMQDLAVLHH 78
Query: 180 PNILPLLDHALT 191
PNI+ L + T
Sbjct: 79 PNIVQLQSYFYT 90
>pdb|3GNM|H Chain H, The Crystal Structure Of The Jaa-f11 Monoclonal Antibody
Fab Fragment
Length = 223
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 11/112 (9%)
Query: 54 YALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 113
Y + I + + Q T P++ PL+ GC+D +S + +V Y
Sbjct: 95 YCARSFIGYNFDFWGQGTTLTVSSATTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGY 150
Query: 114 YPEAVYVK------SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH 159
+PE V VK S V + + GF ++S + + + + +IC+
Sbjct: 151 FPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLV-TVPSSTWPSQTVICN 201
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 17 SKEAVYVK--SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYA---LKKIICHGREDQAQAI 71
+E +Y + SD+Y V+K+G G + V L + T A +KK + +
Sbjct: 10 GRENLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 72 REVEHHKTFVHPNILPL 88
EV K HPNI+ L
Sbjct: 70 DEVAVLKQLDHPNIMKL 86
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYA---LKKIICHGREDQAQAIREVEHHKTFV 178
SD+Y V+K+G G + V L + T A +KK + + EV K
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 179 HPNILPL 185
HPNI+ L
Sbjct: 80 HPNIMKL 86
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 17 SKEAVYVKSD-----KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI 71
S+E +V+ D + IV ++G+G F V ++ +T A K I E+ I
Sbjct: 5 SREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 64
Query: 72 REVEHHKTFVHPNILPLL 89
E+E T HP I+ LL
Sbjct: 65 VEIEILATCDHPYIVKLL 82
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 184
+ IV ++G+G F V ++ T A K I E+ I E+E T HP I+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 185 LL 186
LL
Sbjct: 81 LL 82
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ IV ++G+G F V ++ +T A K I E+ I E+E T HP I+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 88 LL 89
LL
Sbjct: 73 LL 74
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 184
+ IV ++G+G F V ++ T A K I E+ I E+E T HP I+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 185 LL 186
LL
Sbjct: 73 LL 74
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRED-QAQAIREV---EHH 77
+ + +Y V +IG G + TV + ALK + + +G E +REV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 78 KTFVHPNILPLLDHALTGCAD 98
+ F HPN++ L+D T D
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD 81
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI-ICHGRED-QAQAIREV---EHH 174
+ + +Y V +IG G + TV + ALK + + +G E +REV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 175 KTFVHPNILPLLDHALTGCAD 195
+ F HPN++ L+D T D
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD 81
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRED-QAQAIREV---EHH 77
+ + +Y V +IG G + TV + ALK + + +G E +REV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 78 KTFVHPNILPLLDHALTGCAD 98
+ F HPN++ L+D T D
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD 81
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI-ICHGRED-QAQAIREV---EHH 174
+ + +Y V +IG G + TV + ALK + + +G E +REV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 175 KTFVHPNILPLLDHALTGCAD 195
+ F HPN++ L+D T D
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD 81
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRED-QAQAIREV---EHH 77
+ + +Y V +IG G + TV + ALK + + +G E +REV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 78 KTFVHPNILPLLDHALTGCAD 98
+ F HPN++ L+D T D
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD 81
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 120 VKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI-ICHGRED-QAQAIREV---EHH 174
+ + +Y V +IG G + TV + ALK + + +G E +REV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 175 KTFVHPNILPLLDHALTGCAD 195
+ F HPN++ L+D T D
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD 81
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 81
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 109
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 81
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 109
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P + D++ ++ +G G F V L++H + YA+K + + + ++++EH
Sbjct: 54 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH- 108
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
T IL ++ + S + MV+ Y
Sbjct: 109 -TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P + D++ ++ +G G F V L++H + YA+K + + + ++++EH
Sbjct: 54 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH- 108
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
T IL ++ + S + MV+ Y
Sbjct: 109 -TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein
Kinase In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVEH-- 76
K +Y +V K+G G FSTV L + A+K K+ ED+ + ++ V
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 77 ---HKTFVHPNILPLLDH 91
+ +IL LLDH
Sbjct: 77 NTKEDSMGANHILKLLDH 94
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 121 KSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK-----KIICHGREDQAQAIREVEH-- 173
K +Y +V K+G G FSTV L + A+K K+ ED+ + ++ V
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 174 ---HKTFVHPNILPLLDH 188
+ +IL LLDH
Sbjct: 77 NTKEDSMGANHILKLLDH 94
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P + D++ ++ +G G F V L++H + YA+K + + + ++++EH
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH- 87
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
T IL ++ + S + MV+ Y
Sbjct: 88 -TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To
Its Substrate AsfSF2
Length = 381
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+Y+++ K+G G FSTV L Q KK A+K
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK 52
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALK 154
+Y+++ K+G G FSTV L + KK A+K
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK 52
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p,
With Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p,
With Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVEH-- 76
K +Y +V K+G G FSTV L + A+K K+ ED+ + ++ V
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 77 ---HKTFVHPNILPLLDH 91
+ +IL LLDH
Sbjct: 77 NTKEDSMGANHILKLLDH 94
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 121 KSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK-----KIICHGREDQAQAIREVEH-- 173
K +Y +V K+G G FSTV L + A+K K+ ED+ + ++ V
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 174 ---HKTFVHPNILPLLDH 188
+ +IL LLDH
Sbjct: 77 NTKEDSMGANHILKLLDH 94
>pdb|2VQ1|B Chain B, Anti Trimeric Lewis X Fab54-5c10-A
pdb|2VQ1|F Chain F, Anti Trimeric Lewis X Fab54-5c10-A
Length = 218
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 11/112 (9%)
Query: 54 YALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 113
Y +I G + Q T P++ PL+ GC+D +S + +V Y
Sbjct: 95 YYCARIPGFGFDYWGQGTTLTVSSATTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGY 150
Query: 114 YPEAVYVK------SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH 159
+PE V VK S V + + GF ++S + + + + +IC+
Sbjct: 151 FPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLV-TVPSSTWPSQTVICN 201
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 89
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 117
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 89
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 117
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P + D++ ++ +G G F V L++H + YA+K + + + ++++EH
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH- 87
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
T IL ++ + S + MV+ Y
Sbjct: 88 -TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein
Kinase 3 (Dapk3) In Complex With A Beta-Carboline
Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein
Kinase 3 (Dapk3) In Complex With An Imidazo-Pyridazine
Ligand
Length = 283
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI----ICHGRE--DQAQAIREVEHHKT 79
D Y + E++G G F+ V T K YA K I + R + + REV +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 80 FVHPNILPLLD 90
HPNI+ L D
Sbjct: 65 IRHPNIITLHD 75
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI----ICHGRE--DQAQAIREVEHHKT 176
D Y + E++G G F+ V T K YA K I + R + + REV +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 177 FVHPNILPLLD 187
HPNI+ L D
Sbjct: 65 IRHPNIITLHD 75
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+Y+++ K+G G FSTV L Q KK A+K
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK 68
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALK 154
+Y+++ K+G G FSTV L + KK A+K
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK 68
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P + D++ ++ +G G F V L++H + YA+K + + + ++++EH
Sbjct: 34 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH- 88
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
T IL ++ + S + MV+ Y
Sbjct: 89 -TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 115 PEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHH 174
P + D++ ++ +G G F V L++H + YA+K + + + ++++EH
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH- 87
Query: 175 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY 210
T IL ++ + S + MV+ Y
Sbjct: 88 -TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
SD+Y + E +G GG S V L R + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 179 HPNILPLLD 187
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLD 90
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y ++ IGEG + VS K R A+KKI + Q +RE++ F H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 86 LPLLD 90
+ + D
Sbjct: 104 IGIRD 108
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 182
+Y ++ IGEG + VS K R A+KKI + Q +RE++ F H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 183 LPLLD 187
+ + D
Sbjct: 104 IGIRD 108
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
SD+Y + E +G GG S V L R + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 179 HPNILPLLD 187
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLD 90
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI----ICHGRE--DQAQAIREVEHHKT 79
D Y + E++G G F+ V T K YA K I + R + + REV +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 80 FVHPNILPLLD 90
HPNI+ L D
Sbjct: 72 IRHPNIITLHD 82
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI----ICHGRE--DQAQAIREVEHHKT 176
D Y + E++G G F+ V T K YA K I + R + + REV +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 177 FVHPNILPLLD 187
HPNI+ L D
Sbjct: 72 IRHPNIITLHD 82
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIIC 61
NL FQ G L + KY++ IG+G + V + +QT+ A+K KI
Sbjct: 13 NLYFQGGSLLELQK------KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ 66
Query: 62 HGREDQAQAIREVEHHKTFVHPNILPL 88
+D + EV K HPNI L
Sbjct: 67 INPKDVERIKTEVRLMKKLHHPNIARL 93
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
SD+Y + E +G GG S V L R + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 179 HPNILPLLD 187
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLD 90
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYA---LKKIICHGREDQAQAIREVEHHKTFV 178
SD+Y V+K+G G + V L + T A +KK + + EV K
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 179 HPNILPL 185
HPNI+ L
Sbjct: 63 HPNIMKL 69
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYA---LKKIICHGREDQAQAIREVEHHKTFV 81
SD+Y V+K+G G + V L + T A +KK + + EV K
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 82 HPNILPL 88
HPNI+ L
Sbjct: 63 HPNIMKL 69
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
D++ ++ +G G F V L++H + YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L ++ + S + MV+ Y
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 125 YYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 184
+ +E +G G FS V L++ T K +ALK I + E+ K H NI+
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 185 LLD 187
L D
Sbjct: 71 LED 73
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ +E +G G FS V L++ T K +ALK I + E+ K H NI+
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 88 LLD 90
L D
Sbjct: 71 LED 73
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
SD+Y + E +G GG S V L R + A+K + D + + RE ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 179 HPNILPLLD 187
HP I+ + D
Sbjct: 88 HPAIVAVYD 96
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 82 HPNILPLLD 90
HP I+ + D
Sbjct: 88 HPAIVAVYD 96
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 128 VEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPNILP 184
+ +IG G F V R + A+KK+ G+ E I+EV + HPN +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 185 -----LLDHALTGCADPVLNSTSQVLMV 207
L +H + L S S +L V
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEV 146
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPNILP 87
+ +IG G F V + + A+KK+ G+ E I+EV + HPN +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 88 -----LLDHALTGCADPVLNSTSQVLMV 110
L +H + L S S +L V
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEV 146
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
+Y ++ +G GG V + KR A+KKI+ + A+RE++ + H NI+
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 87 PLLD 90
+ +
Sbjct: 72 KVFE 75
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 183
+Y ++ +G GG V + KR A+KKI+ + A+RE++ + H NI+
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 184 PLLD 187
+ +
Sbjct: 72 KVFE 75
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 128 VEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPNILP 184
+ +IG G F V R + A+KK+ G+ E I+EV + HPN +
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 185 -----LLDHALTGCADPVLNSTSQVLMV 207
L +H + L S S +L V
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEV 107
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPNILP 87
+ +IG G F V + + A+KK+ G+ E I+EV + HPN +
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 88 -----LLDHALTGCADPVLNSTSQVLMV 110
L +H + L S S +L V
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEV 107
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 7 NLIFQMGCLCSKEAVYVKSDK------YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI- 59
NL FQ G L + +++ S K Y V+K+G G + V L T A+K I
Sbjct: 13 NLYFQ-GDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIR 71
Query: 60 -ICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
++ + EV K HPNI+ L D
Sbjct: 72 KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 179
S+ Y V+K+G G + V L T A+K I ++ + EV K H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 96 PNIMKLYD 103
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
SD+Y + E +G GG S V L R + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 179 HPNILPLLD 187
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLD 90
HP I+ + D
Sbjct: 71 HPAIVAVYD 79
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
+KY I E +G G F V + +KK Y K + G DQ +E+ H NI
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNI 63
Query: 86 LPL 88
L L
Sbjct: 64 LHL 66
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 182
+KY I E +G G F V + +KK Y K + G DQ +E+ H NI
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNI 63
Query: 183 LPL 185
L L
Sbjct: 64 LHL 66
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 123 DKYYIVEKIGEGGFS-TVSLIEHSRTKKRYALKKIICHGREDQAQAI 168
++Y IV +GEG F V ++H+R K + ALK I G+ +A +
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 97
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 26 DKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAI 71
++Y IV +GEG F V ++H++ K + ALK I G+ +A +
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 97
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 122 SDKYYIVEKIGEGGFS-TVSLIEHSRTKKRYALKKIICHGREDQAQAI 168
++Y IV +GEG F V ++H+R K + ALK I G+ +A +
Sbjct: 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 65
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 25 SDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAI 71
++Y IV +GEG F V ++H++ K + ALK I G+ +A +
Sbjct: 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 65
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE-DQAQAIREVEHHKTFVHPNILPLL 89
++ +G GGF V ++ YA+K+I RE + + +REV+ HP I+
Sbjct: 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 90 DHAL 93
+ L
Sbjct: 70 NAWL 73
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 128 VEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRE-DQAQAIREVEHHKTFVHPNILPLL 186
++ +G GGF V ++ YA+K+I RE + + +REV+ HP I+
Sbjct: 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 187 DHAL 190
+ L
Sbjct: 70 NAWL 73
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 123 DKYYIVEKIGEGGFS-TVSLIEHSRTKKRYALKKIICHGREDQAQAI 168
++Y IV +GEG F V ++H+R K + ALK I G+ +A +
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 74
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 26 DKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAI 71
++Y IV +GEG F V ++H++ K + ALK I G+ +A +
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 74
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Amp
Length = 361
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHKT 79
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 80 FVHPNILPLLD 90
+HPNI+ L D
Sbjct: 72 VLHPNIITLHD 82
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHKT 176
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 177 FVHPNILPLLD 187
+HPNI+ L D
Sbjct: 72 VLHPNIITLHD 82
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE-DQAQAIREVEHHKTFVHPNIL 86
++ +G GGF V ++ YA+K+I RE + + +REV+ HP I+
Sbjct: 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 128 VEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGRE-DQAQAIREVEHHKTFVHPNIL 183
++ +G GGF V ++ YA+K+I RE + + +REV+ HP I+
Sbjct: 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + IG G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 76 ELRLLKHMKHENVIGLLD 93
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + IG G + +V ++T R A+KK+ I H + +
Sbjct: 19 NKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 74
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 75 RELRLLKHMKHENVIGLLD 93
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQA 70
G E +Y +S Y + E++G+G FS V + YA K I D +
Sbjct: 10 GVDLGTENLYFQS-MYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 71 IREVEHHKTFVHPNILPLLD 90
RE + HPNI+ L D
Sbjct: 69 EREARICRLLKHPNIVRLHD 88
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEH 173
E +Y +S Y + E++G+G FS V + YA K I D + RE
Sbjct: 16 ENLYFQS-MYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI 74
Query: 174 HKTFVHPNILPLLD 187
+ HPNI+ L D
Sbjct: 75 CRLLKHPNIVRLHD 88
>pdb|3B8D|A Chain A, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|3B8D|B Chain B, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|3B8D|C Chain C, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|3B8D|D Chain D, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
Length = 363
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VQPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 90
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 91 ELRLLKHMKHENVIGLLD 108
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 34 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 89
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 90 RELRLLKHMKHENVIGLLD 108
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 90
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 91 ELRLLKHMKHENVIGLLD 108
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 34 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 89
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 90 RELRLLKHMKHENVIGLLD 108
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 179
D + I +G+G F V L ++ ALK + E + Q RE+E H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 180 PNILPLLDH 188
PNIL L ++
Sbjct: 83 PNILRLYNY 91
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + I +G+G F V L ++ ALK + E + Q RE+E H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 83 PNILPLLDH 91
PNIL L ++
Sbjct: 83 PNILRLYNY 91
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 89
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 90 ELRLLKHMKHENVIGLLD 107
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 33 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 88
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 89 RELRLLKHMKHENVIGLLD 107
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+E IG GGF V +H K Y +K++ + + +A REV+ H NI+
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIV---- 67
Query: 91 HALTGCAD 98
GC D
Sbjct: 68 -HYNGCWD 74
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 128 VEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 187
+E IG GGF V +H K Y +K++ + + +A REV+ H NI+
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIV---- 67
Query: 188 HALTGCAD 195
GC D
Sbjct: 68 -HYNGCWD 74
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 67 ELRLLKHMKHENVIGLLD 84
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 73 EVEHHKTFVHPNILPLLD 90
E+ K H N++ LLD
Sbjct: 67 ELRLLKHMKHENVIGLLD 84
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 67 ELRLLKHMKHENVIGLLD 84
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 10 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 65
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 66 RELRLLKHMKHENVIGLLD 84
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 67 ELRLLKHMKHENVIGLLD 84
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 10 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 65
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 66 RELRLLKHMKHENVIGLLD 84
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3BV4|A Chain A, Crystal Structure Of A Rabbit Muscle Fructose-1,6-
Bisphosphate Aldolase A Dimer Variant
Length = 341
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 143 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 188
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 189 PDGDHDLKRC 198
>pdb|1EWD|A Chain A, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1EWD|B Chain B, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1EWD|C Chain C, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1EWD|D Chain D, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
Length = 363
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|1ZAH|A Chain A, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ZAH|B Chain B, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ZAH|C Chain C, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ZAH|D Chain D, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ZAI|A Chain A, Fructose-1,6-Bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Rabbit Muscle
pdb|1ZAI|B Chain B, Fructose-1,6-Bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Rabbit Muscle
pdb|1ZAI|C Chain C, Fructose-1,6-Bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Rabbit Muscle
pdb|1ZAI|D Chain D, Fructose-1,6-Bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Rabbit Muscle
pdb|1ZAJ|A Chain A, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With Mannitol-1,6-Bisphosphate, A Competitive
Inhibitor
pdb|1ZAJ|B Chain B, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With Mannitol-1,6-Bisphosphate, A Competitive
Inhibitor
pdb|1ZAJ|C Chain C, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With Mannitol-1,6-Bisphosphate, A Competitive
Inhibitor
pdb|1ZAJ|D Chain D, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With Mannitol-1,6-Bisphosphate, A Competitive
Inhibitor
pdb|1ZAL|A Chain A, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Partially Disordered Tagatose-1,6-
Bisphosphate, A Weak Competitive Inhibitor
pdb|1ZAL|B Chain B, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Partially Disordered Tagatose-1,6-
Bisphosphate, A Weak Competitive Inhibitor
pdb|1ZAL|C Chain C, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Partially Disordered Tagatose-1,6-
Bisphosphate, A Weak Competitive Inhibitor
pdb|1ZAL|D Chain D, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Partially Disordered Tagatose-1,6-
Bisphosphate, A Weak Competitive Inhibitor
pdb|2OT0|A Chain A, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With A C-Terminal Peptide Of Wiskott-Aldrich
Syndrome Protein
pdb|2OT0|B Chain B, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With A C-Terminal Peptide Of Wiskott-Aldrich
Syndrome Protein
pdb|2OT0|C Chain C, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With A C-Terminal Peptide Of Wiskott-Aldrich
Syndrome Protein
pdb|2OT0|D Chain D, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle In
Complex With A C-Terminal Peptide Of Wiskott-Aldrich
Syndrome Protein
pdb|2OT1|A Chain A, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Naphthol As-e Phosphate, A Competitive
Inhibitor
pdb|2OT1|B Chain B, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Naphthol As-e Phosphate, A Competitive
Inhibitor
pdb|2OT1|C Chain C, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Naphthol As-e Phosphate, A Competitive
Inhibitor
pdb|2OT1|D Chain D, Fructose-1,6-bisphosphate Aldolase From Rabbit Muscle In
Complex With Naphthol As-e Phosphate, A Competitive
Inhibitor
pdb|2QUT|A Chain A, Dihydroxyacetone Phosphate Enamine Intermediate In
Fructose- 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|2QUT|B Chain B, Dihydroxyacetone Phosphate Enamine Intermediate In
Fructose- 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|2QUT|C Chain C, Dihydroxyacetone Phosphate Enamine Intermediate In
Fructose- 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|2QUT|D Chain D, Dihydroxyacetone Phosphate Enamine Intermediate In
Fructose- 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|2QUV|A Chain A, Phosphate Ions In Fructose-1,6-bisphosphate Aldolase From
Rabbit Muscle
pdb|2QUV|B Chain B, Phosphate Ions In Fructose-1,6-bisphosphate Aldolase From
Rabbit Muscle
pdb|2QUV|C Chain C, Phosphate Ions In Fructose-1,6-bisphosphate Aldolase From
Rabbit Muscle
pdb|2QUV|D Chain D, Phosphate Ions In Fructose-1,6-bisphosphate Aldolase From
Rabbit Muscle
pdb|3LGE|A Chain A, Crystal Structure Of Rabbit Muscle Aldolase-Snx9 Lc4
Complex
pdb|3LGE|B Chain B, Crystal Structure Of Rabbit Muscle Aldolase-Snx9 Lc4
Complex
pdb|3LGE|C Chain C, Crystal Structure Of Rabbit Muscle Aldolase-Snx9 Lc4
Complex
pdb|3LGE|D Chain D, Crystal Structure Of Rabbit Muscle Aldolase-Snx9 Lc4
Complex
pdb|3TU9|A Chain A, Crystal Structure Of Rabbit Muscle Aldolase Bound With
5-O-Methyl Mannitol 1,6-Phosphate
pdb|3TU9|B Chain B, Crystal Structure Of Rabbit Muscle Aldolase Bound With
5-O-Methyl Mannitol 1,6-Phosphate
pdb|3TU9|C Chain C, Crystal Structure Of Rabbit Muscle Aldolase Bound With
5-O-Methyl Mannitol 1,6-Phosphate
pdb|3TU9|D Chain D, Crystal Structure Of Rabbit Muscle Aldolase Bound With
5-O-Methyl Mannitol 1,6-Phosphate
Length = 363
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|4ALD|A Chain A, Human Muscle Fructose 1,6-Bisphosphate Aldolase Complexed
With Fructose 1,6-Bisphosphate
pdb|2ALD|A Chain A, Human Muscle Aldolase
pdb|1ALD|A Chain A, Activity And Specificity Of Human Aldolases
Length = 363
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa
Ligase From Rhodopseudomonas Palustris Cga009
pdb|3IVR|B Chain B, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa
Ligase From Rhodopseudomonas Palustris Cga009
Length = 509
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 66 DQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQV 107
D AQA R++E HK V P+L + L A L S V
Sbjct: 236 DPAQAARDIEAHKVTVMAEFAPMLGNILDQAAPAQLASLRAV 277
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 163 DQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQV 204
D AQA R++E HK V P+L + L A L S V
Sbjct: 236 DPAQAARDIEAHKVTVMAEFAPMLGNILDQAAPAQLASLRAV 277
>pdb|3DFN|A Chain A, D33n Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFN|B Chain B, D33n Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFN|C Chain C, D33n Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFN|D Chain D, D33n Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFO|A Chain A, Dihydroxyacetone Phosphate Schiff Base And Enamine
Intermediates In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFO|B Chain B, Dihydroxyacetone Phosphate Schiff Base And Enamine
Intermediates In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFO|C Chain C, Dihydroxyacetone Phosphate Schiff Base And Enamine
Intermediates In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFO|D Chain D, Dihydroxyacetone Phosphate Schiff Base And Enamine
Intermediates In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFP|A Chain A, Phosphate Ions In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFP|B Chain B, Phosphate Ions In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFP|C Chain C, Phosphate Ions In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFP|D Chain D, Phosphate Ions In D33n Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
Length = 363
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|3DFQ|A Chain A, D33s Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFQ|B Chain B, D33s Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFQ|C Chain C, D33s Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFQ|D Chain D, D33s Mutant Fructose-1,6-Bisphosphate Aldolase From Rabbit
Muscle
pdb|3DFS|A Chain A, Dihydroxyacetone Phosphate Schiff Base Intermediate In
D33s Mutant Fructose-1,6-Bisphosphate Aldolase From
Rabbit Muscle
pdb|3DFS|B Chain B, Dihydroxyacetone Phosphate Schiff Base Intermediate In
D33s Mutant Fructose-1,6-Bisphosphate Aldolase From
Rabbit Muscle
pdb|3DFS|C Chain C, Dihydroxyacetone Phosphate Schiff Base Intermediate In
D33s Mutant Fructose-1,6-Bisphosphate Aldolase From
Rabbit Muscle
pdb|3DFS|D Chain D, Dihydroxyacetone Phosphate Schiff Base Intermediate In
D33s Mutant Fructose-1,6-Bisphosphate Aldolase From
Rabbit Muscle
pdb|3DFT|A Chain A, Phosphate Ions In D33s Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFT|B Chain B, Phosphate Ions In D33s Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFT|C Chain C, Phosphate Ions In D33s Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
pdb|3DFT|D Chain D, Phosphate Ions In D33s Mutant Fructose-1,6-Bisphosphate
Aldolase From Rabbit Muscle
Length = 363
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 77 ELRLLKHMKHENVIGLLD 94
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 20 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 75
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 76 RELRLLKHMKHENVIGLLD 94
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 90
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 91 ELRLLKHMKHENVIGLLD 108
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 34 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 89
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 90 RELRLLKHMKHENVIGLLD 108
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 78 ELRLLKHMKHENVIGLLD 95
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 21 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 76
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 77 RELRLLKHMKHENVIGLLD 95
>pdb|1J4E|A Chain A, Fructose-1,6-Bisphosphate Aldolase Covalently Bound To The
Substrate Dihydroxyacetone Phosphate
pdb|1J4E|B Chain B, Fructose-1,6-Bisphosphate Aldolase Covalently Bound To The
Substrate Dihydroxyacetone Phosphate
pdb|1J4E|C Chain C, Fructose-1,6-Bisphosphate Aldolase Covalently Bound To The
Substrate Dihydroxyacetone Phosphate
pdb|1J4E|D Chain D, Fructose-1,6-Bisphosphate Aldolase Covalently Bound To The
Substrate Dihydroxyacetone Phosphate
Length = 363
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 93
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 94 ELRLLKHMKHENVIGLLD 111
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 37 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 92
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 93 RELRLLKHMKHENVIGLLD 111
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 78 ELRLLKHMKHENVIGLLD 95
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 21 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 76
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 77 RELRLLKHMKHENVIGLLD 95
>pdb|1ADO|A Chain A, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ADO|B Chain B, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ADO|C Chain C, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
pdb|1ADO|D Chain D, Fructose 1,6-Bisphosphate Aldolase From Rabbit Muscle
Length = 363
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
K+ V KIGE S ++++E++ RYA IC Q I + V P IL
Sbjct: 146 KWRCVLKIGEHTPSALAIMENANVLARYA---SIC-----QQNGIVPI------VEPEIL 191
Query: 87 PLLDHALTGC 96
P DH L C
Sbjct: 192 PDGDHDLKRC 201
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK----RTYR 82
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 83 ELRLLKHMKHENVIGLLD 100
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 26 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK----RTY 81
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 82 RELRLLKHMKHENVIGLLD 100
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 82
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 83 ELRLLKHMKHENVIGLLD 100
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 26 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 81
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 82 RELRLLKHMKHENVIGLLD 100
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 68
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 69 ELRLLKHMKHENVIGLLD 86
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 12 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 67
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 68 RELRLLKHMKHENVIGLLD 86
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 73 ELRLLKHMKHENVIGLLD 90
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 16 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 71
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 72 RELRLLKHMKHENVIGLLD 90
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 73 ELRLLKHMKHENVIGLLD 90
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 16 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 71
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 72 RELRLLKHMKHENVIGLLD 90
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 78 ELRLLKHMKHENVIGLLD 95
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 21 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 76
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 77 RELRLLKHMKHENVIGLLD 95
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 82
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 83 ELRLLKHMKHENVIGLLD 100
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 26 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 81
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 82 RELRLLKHMKHENVIGLLD 100
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 93
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 94 ELRLLKHMKHENVIGLLD 111
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 19/99 (19%)
Query: 7 NLIFQMGCLCSKEAVYVKS---------DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
NL FQ + Y + ++Y + +G G + +V ++T R A+K
Sbjct: 17 NLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 76
Query: 58 KI------ICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
K+ I H + + RE+ K H N++ LLD
Sbjct: 77 KLSRPFQSIIHAK----RTYRELRLLKHMKHENVIGLLD 111
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 67 ELRLLKHMKHENVIGLLD 84
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 10 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 65
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 66 RELRLLKHMKHENVIGLLD 84
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 67
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 68 ELRLLKHMKHENVIGLLD 85
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 11 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 66
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 67 RELRLLKHMKHENVIGLLD 85
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 77 ELRLLKHMKHENVIGLLD 94
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 20 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 75
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 76 RELRLLKHMKHENVIGLLD 94
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 81
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 82 ELRLLKHMKHENVIGLLD 99
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 25 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 80
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 81 RELRLLKHMKHENVIGLLD 99
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + T K+ A+KK+ ++ + EV + + H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 93 LTG 95
L G
Sbjct: 112 LVG 114
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 130 KIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 189
KIGEG V + T K+ A+KK+ ++ + EV + + H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 190 LTG 192
L G
Sbjct: 112 LVG 114
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 89
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 90 ELRLLKHMKHENVIGLLD 107
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 33 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 88
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 89 RELRLLKHMKHENVIGLLD 107
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 80
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 81 ELRLLKHMKHENVIGLLD 98
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 24 NKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTY 79
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 80 RELRLLKHMKHENVIGLLD 98
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 78 ELRLLKHMKHENVIGLLD 95
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 21 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 76
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 77 RELRLLKHMKHENVIGLLD 95
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 76 ELRLLKHMKHENVIGLLD 93
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 19 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 74
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 75 RELRLLKHMKHENVIGLLD 93
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 67
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 68 ELRLLKHMKHENVIGLLD 85
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 11 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 66
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 67 RELRLLKHMKHENVIGLLD 85
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 76 ELRLLKHMKHENVIGLLD 93
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 19 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 74
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 75 RELRLLKHMKHENVIGLLD 93
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 73 ELRLLKHMKHENVIGLLD 90
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 16 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 71
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 72 RELRLLKHMKHENVIGLLD 90
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 69
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 70 ELRLLKHMKHENVIGLLD 87
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 13 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 68
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 69 RELRLLKHMKHENVIGLLD 87
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 73 ELRLLKHMKHENVIGLLD 90
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 16 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 71
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 72 RELRLLKHMKHENVIGLLD 90
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 77 ELRLLKHMKHENVIGLLD 94
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 20 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 75
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 76 RELRLLKHMKHENVIGLLD 94
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 81
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 82 ELRLLKHMKHENVIGLLD 99
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 25 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 80
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 81 RELRLLKHMKHENVIGLLD 99
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 76 ELRLLKHMKHENVIGLLD 93
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 19 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 74
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 75 RELRLLKHMKHENVIGLLD 93
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+D+Y + E IG+G FS V T YA K I D + RE + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 PNILPLLD 90
NI+ L D
Sbjct: 63 SNIVRLHD 70
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
+D+Y + E IG+G FS V T YA K I D + RE + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 180 PNILPLLD 187
NI+ L D
Sbjct: 63 SNIVRLHD 70
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVHPN 84
+ I +KIG G FS V ALKK+ D +A I+E++ K HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTVSLIEH 144
V+ YY A +++ ++ IV ++ + G +I+H
Sbjct: 94 -------------------------VIKYY--ASFIEDNELNIVLELADAG-DLSRMIKH 125
Query: 145 SRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 184
+ +KR ++ + A+ + H + +H +I P
Sbjct: 126 FKKQKRLIPERTVWKYFVQLCSALEHM-HSRRVMHRDIKP 164
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 129 EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 181
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 182 ILPL 185
I+ L
Sbjct: 85 IVKL 88
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 84
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 85 ILPL 88
I+ L
Sbjct: 85 IVKL 88
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 71 ELRLLKHMKHENVIGLLD 88
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 14 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 69
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 70 RELRLLKHMKHENVIGLLD 88
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 116 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIR 169
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 170 EVEHHKTFVHPNILPLLD 187
E+ K H N++ LLD
Sbjct: 77 ELRLLKHMKHENVIGLLD 94
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAI 71
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + +
Sbjct: 20 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTY 75
Query: 72 REVEHHKTFVHPNILPLLD 90
RE+ K H N++ LLD
Sbjct: 76 RELRLLKHMKHENVIGLLD 94
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 129 EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 181
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 182 ILPL 185
I+ L
Sbjct: 85 IVKL 88
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 84
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 85 ILPL 88
I+ L
Sbjct: 85 IVKL 88
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13 GCLCSKEAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA 70
G L S +VY K+ D+Y + + +G G V L +T K+ A+K I R+ +
Sbjct: 1 GPLGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIK--IISKRKFAIGS 58
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPY-YPEAVYVK----SDKY 125
RE ADP LN +++ ++ +P + +K ++ Y
Sbjct: 59 ARE-----------------------ADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY 95
Query: 126 YIVEKIGEGGFSTVSLIEHSRTKK 149
YIV ++ EGG ++ + R K+
Sbjct: 96 YIVLELMEGGELFDKVVGNKRLKE 119
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 129 EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 181
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 182 ILPL 185
I+ L
Sbjct: 85 IVKL 88
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 84
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 85 ILPL 88
I+ L
Sbjct: 85 IVKL 88
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 123 DKYYIVEKIGEGGFS-TVSLIEHSRTKKRYALKKI 156
++Y IV +GEG F V ++H R R ALK I
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKII 67
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 80 FRHENIIGIND 90
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 80 FRHENIIGIND 90
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 178
SD+Y + E +G GG S V L R + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 179 HPNIL 183
HP I+
Sbjct: 71 HPAIV 75
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 80 FRHENIIGIND 90
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 80 FRHENIIGIND 90
>pdb|1M71|B Chain B, Crystal Structure Of A Monoclonal Fab Specific For
Shigella Flexneri Y Lipopolysaccharide
pdb|1M7D|B Chain B, Crystal Structure Of A Monoclonal Fab Specific For
Shigella Flexneri Y Lipopolysaccharide Complexed With A
Trisaccharide
pdb|1M7I|B Chain B, Crystal Structure Of A Monoclonal Fab Specific For
Shigella Flexneri Y Lipopolysaccharide Complexed With A
Pentasaccharide
Length = 220
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 68 AQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVK------ 121
Q T P++ PL+ GC+D +S + +V Y+PE V VK
Sbjct: 111 GQGTSVTVSSATTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH 159
S V + + GF ++S + + + + +IC+
Sbjct: 167 SSGVRTVSSVLQSGFYSLSSL-VTVPSSTWPSQTVICN 203
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+E IG GGF V +H K Y ++++ + + +A REV+ H NI+
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIV---- 68
Query: 91 HALTGCAD 98
GC D
Sbjct: 69 -HYNGCWD 75
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 128 VEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 187
+E IG GGF V +H K Y ++++ + + +A REV+ H NI+
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIV---- 68
Query: 188 HALTGCAD 195
GC D
Sbjct: 69 -HYNGCWD 75
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
>pdb|1PZ5|B Chain B, Structural Basis Of Peptide-Carbohydrate Mimicry In An
Antibody Combining Site
Length = 220
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 68 AQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVK------ 121
Q T P++ PL+ GC+D +S + +V Y+PE V VK
Sbjct: 111 GQGTSVTVSSATTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH 159
S V + + GF ++S + + + + +IC+
Sbjct: 167 SSGVRTVSSVLQSGFYSLSSL-VTVPSSTWPSQTVICN 203
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 98 FRHENIIGIND 108
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 98 FRHENIIGIND 108
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 76 FRHENIIGIND 86
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 76 FRHENIIGIND 86
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 83 FRHENIIGIND 93
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 83 FRHENIIGIND 93
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+ + I++ IG G F V++++ T++ YA+K
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMK 105
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK 154
+ + I++ IG G F V++++ T++ YA+K
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMK 105
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2
In Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 83
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 84 FRHENIIGIND 94
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 83
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 84 FRHENIIGIND 94
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 74
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 75 FRHENIIGIND 85
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 74
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 75 FRHENIIGIND 85
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide
Derived From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide
Derived From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 76 FRHENIIGIND 86
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 76 FRHENIIGIND 86
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 98 FRHENIIGIND 108
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 98 FRHENIIGIND 108
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 83 FRHENIIGIND 93
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 83 FRHENIIGIND 93
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK 60
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK 60
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 18 LGEGSFSTVVLARELATSREYAIK 41
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 18 LGEGSFSTVVLARELATSREYAIK 41
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK 60
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK 60
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 17 LGEGSFSTVVLARELATSREYAIK 40
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 17 LGEGSFSTVVLARELATSREYAIK 40
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 80 FRHENIIGIND 90
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 80 FRHENIIGIND 90
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 22 LGEGSFSTVVLARELATSREYAIK 45
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 22 LGEGSFSTVVLARELATSREYAIK 45
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With
Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With
Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With
Fragment17
Length = 286
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 16 LGEGSFSTVVLARELATSREYAIK 39
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 16 LGEGSFSTVVLARELATSREYAIK 39
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 15 LGEGSFSTVVLARELATSREYAIK 38
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 15 LGEGSFSTVVLARELATSREYAIK 38
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 45 LGEGSFSTVVLARELATSREYAIK 68
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 45 LGEGSFSTVVLARELATSREYAIK 68
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH-HKTFVHPNILPLLD 90
E +GEG ++ V Q K YA+K I +++ REVE ++ + NIL L++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI- 71
G + +E V D Y E++G G F+ V T +YA K I + + +
Sbjct: 1 GTVFRQENV---DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 72 -----REVEHHKTFVHPNILPL 88
REV K HPN++ L
Sbjct: 58 REDIEREVSILKEIQHPNVITL 79
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 85
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 86 FRHENIIGIND 96
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 85
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 86 FRHENIIGIND 96
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 78 FRHENIIGIND 88
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 78 FRHENIIGIND 88
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK 61
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK 61
>pdb|1UZ6|F Chain F, Anti-Lewis X Fab Fragment Uncomplexed
pdb|1UZ6|H Chain H, Anti-Lewis X Fab Fragment Uncomplexed
pdb|1UZ6|P Chain P, Anti-Lewis X Fab Fragment Uncomplexed
pdb|1UZ6|W Chain W, Anti-Lewis X Fab Fragment Uncomplexed
Length = 217
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 68 AQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVK------ 121
Q T P++ PL+ GC+D +S + +V Y+PE V VK
Sbjct: 108 GQGTTLTVSSATTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 163
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH 159
S V + + GF ++S + + + + +IC+
Sbjct: 164 SSGVRTVSSVLQSGFYSLSSL-VTVPSSTWPSQTVICN 200
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of
3- Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK 61
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK 61
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 78 FRHENIIGIND 88
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 78 FRHENIIGIND 88
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK 61
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK 61
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-
1h-Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-
6-Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK 64
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK 64
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK 64
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK 64
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
+ + I++ IG G F V++++ T++ YA+K
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMK 121
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 123 DKYYIVEKIGEGGFSTVSLIEHSRTKKRYALK 154
+ + I++ IG G F V++++ T++ YA+K
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMK 121
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 43 LGEGSFSTVVLARELATSREYAIK 66
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 43 LGEGSFSTVVLARELATSREYAIK 66
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified
Human Pdk1 Complex 2
Length = 311
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase
Domain In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted
Nh-Heterocyclic Kinase Inhibitors Via One-Pot
Sonogashira Coupling Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 78 FRHENIIGIND 88
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A+KKI + Q +RE++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 78 FRHENIIGIND 88
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 18/97 (18%)
Query: 34 IGEGGFSTV---SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
IG G F V L+E + A+KK++ +D+ RE++ + HPN++ L
Sbjct: 48 IGNGSFGVVFQAKLVESDEV----AIKKVL----QDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 91 HALTGCADPVLNSTSQVLM--VLPYYPEAVYVKSDKY 125
+ + +V + VL Y PE VY S Y
Sbjct: 100 FFYSNG-----DKKDEVFLNLVLEYVPETVYRASRHY 131
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI- 71
G + +E V D Y E++G G F+ V T +YA K I + + +
Sbjct: 1 GTVFRQENV---DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 72 -----REVEHHKTFVHPNILPL 88
REV K HPN++ L
Sbjct: 58 REDIEREVSILKEIQHPNVITL 79
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of
3- Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK 57
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALK 154
+GEG FSTV L T + YA+K
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK 63
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 32 EKIGE-GGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
E IGE G F V ++ +T A K I E+ + E++ + HPNI+ LLD
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
>pdb|3HNS|H Chain H, Cs-35 Fab Complex With Oligoarabinofuranosyl
Hexasaccharide
pdb|3HNT|H Chain H, Cs-35 Fab Complex With A Linear, Terminal
Oligoarabinofuranosyl Tetrasaccharide From
Lipoarabinomannan
pdb|3HNV|H Chain H, Cs-35 Fab Complex With Oligoarabinofuranosyl
Tetrasaccharide (Branch Part Of Hexasaccharide)
Length = 220
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVK------SDKYYIVEKIG 132
T P++ PL+ GC+D +S + +V Y+PE V VK S V +
Sbjct: 120 TTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVL 175
Query: 133 EGGFSTVSLIEHSRTKKRYALKKIICH 159
+ GF ++S + + + + +IC+
Sbjct: 176 QSGFYSLSSLV-TVPSSTWPSQTVICN 201
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLD 90
+ + D
Sbjct: 84 IGIND 88
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 182
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 183 LPLLD 187
+ + D
Sbjct: 84 IGIND 88
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 184
+G G + +V +R +++ A+KK+ + H R + RE+ K H N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR----RTYRELRLLKHLKHENVIG 83
Query: 185 LLD 187
LLD
Sbjct: 84 LLD 86
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1)
In Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLD 90
+ + D
Sbjct: 84 IGIND 88
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 124 KYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 182
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 183 LPLLD 187
+ + D
Sbjct: 84 IGIND 88
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 184
+G G + +V +R +++ A+KK+ + H R + RE+ K H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR----RTYRELRLLKHLKHENVIG 91
Query: 185 LLD 187
LLD
Sbjct: 92 LLD 94
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 131 IGEGGFSTVSLIEHSRTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 184
+G G + +V +R +++ A+KK+ + H R + RE+ K H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR----RTYRELRLLKHLKHENVIG 91
Query: 185 LLD 187
LLD
Sbjct: 92 LLD 94
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With
N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 111
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 112 LSLLGICLRSEGSP--------LVVLPY 131
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 111
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 112 LSLLGICLRSEGSP--------LVVLPY 131
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 69 EIQHPNVITL 78
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 69 EIQHPNVITL 78
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 85
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 86 LSLLGICLRSEGSP--------LVVLPY 105
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 85
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 86 LSLLGICLRSEGSP--------LVVLPY 105
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain
Of Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 69 EIQHPNVITL 78
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 69 EIQHPNVITL 78
>pdb|3I50|H Chain H, Crystal Structure Of The West Nile Virus Envelope
Glycoprotein In Complex With The E53 Antibody Fab
Length = 221
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVK------SDKYYIVE 129
T P++ PL+ GC+D +S + +V Y+PE V VK S V
Sbjct: 120 SSATTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVS 175
Query: 130 KIGEGGFSTVSLIEHSRTKKRYALKKIICH 159
+ + GF ++S + + + + +IC+
Sbjct: 176 SVLQSGFYSLSSLV-TVPSSTWPSQTVICN 204
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 90
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 91 LSLLGICLRSEGSP--------LVVLPY 110
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 90
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 91 LSLLGICLRSEGSP--------LVVLPY 110
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPL 88
HPN++ L
Sbjct: 70 EIQHPNVITL 79
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 DKYYIV-EKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQAI------REVEHHK 175
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 176 TFVHPNILPL 185
HPN++ L
Sbjct: 70 EIQHPNVITL 79
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 95 LSLLGICLRSEGSP--------LVVLPY 114
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 95 LSLLGICLRSEGSP--------LVVLPY 114
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 112
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 113 LSLLGICLRSEGSP--------LVVLPY 132
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 112
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 113 LSLLGICLRSEGSP--------LVVLPY 132
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 152
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 153 LSLLGICLRSEGSP--------LVVLPY 172
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 152
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 153 LSLLGICLRSEGSP--------LVVLPY 172
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
>pdb|3IJH|B Chain B, Structure Of S67-27 In Complex With Ko
pdb|3IJH|D Chain D, Structure Of S67-27 In Complex With Ko
pdb|3IJS|B Chain B, Structure Of S67-27 In Complex With Tsbp
pdb|3IJS|D Chain D, Structure Of S67-27 In Complex With Tsbp
pdb|3IJY|B Chain B, Structure Of S67-27 In Complex With Kdo(2.8)kdo
pdb|3IJY|D Chain D, Structure Of S67-27 In Complex With Kdo(2.8)kdo
pdb|3IKC|B Chain B, Structure Of S67-27 In Complex With
Kdo(2.8)-7-O-Methyl-Kdo
pdb|3IKC|D Chain D, Structure Of S67-27 In Complex With
Kdo(2.8)-7-O-Methyl-Kdo
Length = 226
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVK------SDKYYIVEKIG 132
T P++ PL+ GC+D +S + +V Y+PE V VK S V +
Sbjct: 128 TTTAPSVYPLVP----GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVL 183
Query: 133 EGGFSTVSLIEHSRTKKRYALKKIICH 159
+ GF ++S + + + + +IC+
Sbjct: 184 QSGFYSLSSLV-TVPSSTWPSQTVICN 209
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 95 LSLLGICLRSEGSP--------LVVLPY 114
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 95 LSLLGICLRSEGSP--------LVVLPY 114
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 93 LSLLGICLRSEGSP--------LVVLPY 112
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 129 EKIGEGGFSTV---SLIEHSRTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 182
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 183 LPLLDHALTGCADPVLNSTSQVLMVLPY 210
L LL L P L+VLPY
Sbjct: 93 LSLLGICLRSEGSP--------LVVLPY 112
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 93 LSLLGICLRSEGSP--------LVVLPY 112
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 92 LSLLGICLRSEGSP--------LVVLPY 111
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 98
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 99 LSLLGICLRSEGSP--------LVVLPY 118
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 88
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 89 LSLLGICLRSEGSP--------LVVLPY 108
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKT 79
V+ +Y + IGEG + V + K R A++KI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLR 81
Query: 80 FVHPNILPLLD 90
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 118 VYVKSDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICHGREDQAQ-AIREVEHHKT 176
V+ +Y + IGEG + V + K R A++KI + Q +RE++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLR 81
Query: 177 FVHPNILPLLD 187
F H NI+ + D
Sbjct: 82 FRHENIIGIND 92
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+++Y + E++G+G FS V + YA I D + RE + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 83 PNILPLLD 90
PNI+ L D
Sbjct: 70 PNIVRLHD 77
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 122 SDKYYIVEKIGEGGFSTVSLIEHSRTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 179
+++Y + E++G+G FS V + YA I D + RE + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 180 PNILPLLD 187
PNI+ L D
Sbjct: 70 PNIVRLHD 77
>pdb|2X0C|A Chain A, Structure Of The Talin Rod Residues 1359-1659
Length = 309
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 62 HGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNST 104
HG+++ A+R++E + + + P+ D + GC D V+ ++
Sbjct: 8 HGQKECDNALRQLETVRELLENPVQPINDMSYFGCLDSVMENS 50
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 159 HGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNST 201
HG+++ A+R++E + + + P+ D + GC D V+ ++
Sbjct: 8 HGQKECDNALRQLETVRELLENPVQPINDMSYFGCLDSVMENS 50
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 92 LSLLGICLRSEGSP--------LVVLPY 111
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPY 113
L LL L P L+VLPY
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPY 113
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 42/165 (25%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI---ICHGREDQAQAIREVEHHKT 79
+ D Y + E IG G + V + K++ A+K+I C D + ++E++
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQ 64
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPEAVYVKSDKYYIVEKIGEGGFSTV 139
HPNI + YY +V D+ ++V K+ GG S +
Sbjct: 65 CHHPNI-------------------------VSYYTS--FVVKDELWLVMKLLSGG-SVL 96
Query: 140 SLIEHSRTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVHPN 181
+I+H K + G D+ A +REV ++H N
Sbjct: 97 DIIKHIVAKGEHK------SGVLDESTIATILREVLEGLEYLHKN 135
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,354,216
Number of Sequences: 62578
Number of extensions: 253143
Number of successful extensions: 2119
Number of sequences better than 100.0: 496
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 330
Number of HSP's that attempted gapping in prelim test: 1276
Number of HSP's gapped (non-prelim): 988
length of query: 212
length of database: 14,973,337
effective HSP length: 95
effective length of query: 117
effective length of database: 9,028,427
effective search space: 1056325959
effective search space used: 1056325959
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)