BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5690
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 177 KWTAP-----------------------------------------ESLAYNKFSIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 196 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 247
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 181
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 182 KWTAP-----------------------------------------ESLAYNKFSIKSDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 201 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 252
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 177 KWTAP-----------------------------------------ESLAYNKFSIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 196 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 247
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 177 KWTAP-----------------------------------------ESLAYNKFSIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 196 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 247
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 177 KWTAP-----------------------------------------ESLAYNKFSIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 196 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 247
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 181
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 182 KWTAP-----------------------------------------ESLAYNKFSIKSDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 201 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 252
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 177 KWTAP-----------------------------------------ESLAYNKFSIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 196 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 247
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 178
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 179 KWTAP-----------------------------------------ESLAYNKFSIKSDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 198 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 249
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAPAGAKFPI 178
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 179 KWTAP-----------------------------------------ESLAYNKFSIKSDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 198 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 249
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 130
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 131 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 189
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 190 KWTAP-----------------------------------------ESLAYNKFSIKSDV 208
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 209 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 260
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 261 CWQWNPSDRPSFAEIH 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D + + A+ PI
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTFTAHAGAKFPI 174
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 175 KWTAP-----------------------------------------ESLAYNKFSIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 194 WAFGVLLWEIATY-GMSPYPGIDPSQV-------YELLEKDYRMERPEGCPEKVYELMRA 245
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 246 CWQWNPSDRPSFAEIH 261
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 178
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 179 KWTAP-----------------------------------------ESLAYNKFSIKSDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 198 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 249
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 118
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAPAGAKFPI 177
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 178 KWTAP-----------------------------------------ESLAYNKFSIKSDV 196
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 197 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 248
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 249 CWQWNPSDRPSFAEIH 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 181
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 182 KWTAP-----------------------------------------ESLAYNKFSIKSDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 201 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 252
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 177 KWTAP-----------------------------------------ESLAYNKFSIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 196 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 247
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 180
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 181 KWTAP-----------------------------------------ESLAYNKFSIKSDV 199
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 200 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 251
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 252 CWQWNPSDRPSFAEIH 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 181
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 182 KWTAP-----------------------------------------ESLAYNKFSIKSDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 201 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 252
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 324
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HR+LAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 325 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 383
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 384 KWTAP-----------------------------------------ESLAYNKFSIKSDV 402
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 403 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 454
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 455 CWQWNPSDRPSFAEIH 470
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D + A+ PI
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPI 174
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 175 KWTAP-----------------------------------------ESLAYNKFSIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 194 WAFGVLLWEIATY-GMSPYPGIDPSQV-------YELLEKDYRMERPEGCPEKVYELMRA 245
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 246 CWQWNPSDRPSFAEIH 261
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 363
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HR+LAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 364 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 422
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 423 KWTAP-----------------------------------------ESLAYNKFSIKSDV 441
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV E Y+ + RP C +++++LM
Sbjct: 442 WAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRA 493
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 494 CWQWNPSDRPSFAEIH 509
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 321
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HR+LAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 322 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPI 380
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 381 KWTAP-----------------------------------------ESLAYNKFSIKSDV 399
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV E Y+ + RP C +++++LM
Sbjct: 400 WAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRA 451
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 452 CWQWNPSDRPSFAEIH 467
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAV---VLLYMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D + A+ PI
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPI 174
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 175 KWTAP-----------------------------------------ESLAYNKFSIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 194 WAFGVLLWEIATY-GMSPYPGIDPSQV-------YELLEKDYRMERPEGCPEKVYELMRA 245
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 246 CWQWNPSDRPSFAEIH 261
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D + A+ PI
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPI 181
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 182 KWTAP-----------------------------------------ESLAYNKFSIKSDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 201 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 252
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 128/269 (47%), Gaps = 58/269 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNS---------QENPAI 51
+ +L+ ++V+ GVC DP+ + EY + GDL+ FL+ H ++ Q +
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 52 SYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL 111
++ +A+QIASGM YL S+ VHRDLA RN
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRN--------------------------- 163
Query: 112 SDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
C+VG N +KI D M Y +DYY LPIRWM ES++
Sbjct: 164 --------------CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 209
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
K TT+SDVWSF V LWEI + Q P+ +L+N +VIE ++ + L RP C
Sbjct: 210 RKFTTESDVWSFGVILWEIFTYGKQ-PWFQLSNTEVIECI-------TQGRVLERPRVCP 261
Query: 232 KEIFDLMLECWKTNETDRPRFSEIHLFLQ 260
KE++D+ML CW+ R EI+ L
Sbjct: 262 KEVYDVMLGCWQREPQQRLNIKEIYKILH 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P I E+ +G+L +L+ CN QE A+ L++MA
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVNAV---VLLYMA 118
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D + A+ PI
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPI 177
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL K + KSDV
Sbjct: 178 KWTAP-----------------------------------------ESLAYNKFSIKSDV 196
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV Y+ K + RP C +++++LM
Sbjct: 197 WAFGVLLWEIATY-GMSPYPGIDLSQV-------YELLEKDYRMERPEGCPEKVYELMRA 248
Query: 241 CWKTNETDRPRFSEIH 256
CW+ N +DRP F+EIH
Sbjct: 249 CWQWNPSDRPSFAEIH 264
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 138/277 (49%), Gaps = 58/277 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNS----QENP--AISYG 54
+ +L+ ++V+ GVC DP+ + EY + GDL+ FL+ H ++ + NP ++
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT 114
++ +A QIA+GM YL S+ VHRDLA RN
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRN------------------------------ 158
Query: 115 KARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN 174
C+VG+N +KI D M Y +DYY LPIRWM ES++ K
Sbjct: 159 -----------CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF 207
Query: 175 TTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
TT+SDVWS V LWEI + Q P+ +L+N +VIE ++ + L RP TC +E+
Sbjct: 208 TTESDVWSLGVVLWEIFTYGKQ-PWYQLSNNEVIECI-------TQGRVLQRPRTCPQEV 259
Query: 235 FDLMLECWKTNETDRPRFSEIHLFLQRKNLGARASKI 271
++LML CW+ R IH LQ NL A+AS +
Sbjct: 260 YELMLGCWQREPHMRKNIKGIHTLLQ--NL-AKASPV 293
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 55/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +K PNLV+++GVC+ E P + EY +G+L +L+ CN +E A+ L++MA
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLR--ECNREEVTAV---VLLYMA 136
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
TQI+S M+YLE ++ +HRDLAARNC+VG+N+ +K++D + D Y + A+ PI
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL-SRLMTGDTYTAHAGAKFPI 195
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A ESL + KSDV
Sbjct: 196 KWTAP-----------------------------------------ESLAYNTFSIKSDV 214
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F V LWEI + PY + QV + Y+ + +P C ++++LM
Sbjct: 215 WAFGVLLWEIATY-GMSPYPGIDLSQVYDLLEKGYR-------MEQPEGCPPKVYELMRA 266
Query: 241 CWKTNETDRPRFSEIH 256
CWK + DRP F+E H
Sbjct: 267 CWKWSPADRPSFAETH 282
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHRDLAARN
Sbjct: 140 DGMAYLNAKKFVHRDLAARN---------------------------------------- 159
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M YE+DYY K LP+RWMA ESL G TT SD+WSF
Sbjct: 160 -CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 218
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 219 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 270
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 271 NPKMRPTFLEI 281
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHRDLAARN
Sbjct: 141 DGMAYLNAKKFVHRDLAARN---------------------------------------- 160
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M YE+DYY K LP+RWMA ESL G TT SD+WSF
Sbjct: 161 -CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 220 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 272 NPKMRPTFLEI 282
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 142 DGMAYLNANKFVHRDLAARN---------------------------------------- 161
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 162 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 221 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 272
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 273 NPKMRPSFLEI 283
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 171 DGMAYLNANKFVHRDLAARN---------------------------------------- 190
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 191 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 249
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 250 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 301
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 302 NPKMRPSFLEI 312
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 142 DGMAYLNANKFVHRDLAARN---------------------------------------- 161
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 162 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 221 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 272
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 273 NPKMRPSFLEI 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 143 DGMAYLNANKFVHRDLAARN---------------------------------------- 162
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 163 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 222 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 273
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 274 NPKMRPSFLEI 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 136 DGMAYLNANKFVHRDLAARN---------------------------------------- 155
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 156 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 214
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 215 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 266
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 267 NPKMRPSFLEI 277
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 129/278 (46%), Gaps = 66/278 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHN-----------------C 43
M +PN+V+++GVC+ P+ + EY +GDL+ FL+ +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 44 NSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS 103
+S P +S + +A Q+A+GM YL R VHRDLA RN
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN------------------- 204
Query: 104 HYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRW 163
C+VG+N +KI+D + + Y +DYY +D +PIRW
Sbjct: 205 ----------------------CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRW 242
Query: 164 MAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQY 223
M ES+ + TT+SDVW++ V LWEI + Q PY + +E+VI +Y +
Sbjct: 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ-PYYGMAHEEVI-----YYVRDG--NI 294
Query: 224 LPRPATCQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
L P C E+++LM CW DRP F IH LQR
Sbjct: 295 LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 140 DGMAYLNANKFVHRDLAARN---------------------------------------- 159
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 160 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 218
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 219 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 270
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 271 NPKMRPSFLEI 281
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 149 DGMAYLNANKFVHRDLAARN---------------------------------------- 168
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 169 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 228 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 279
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 280 NPKMRPSFLEI 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHR+LAARN
Sbjct: 142 DGMAYLNAKKFVHRNLAARN---------------------------------------- 161
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M YE+DYY K LP+RWMA ESL G TT SD+WSF
Sbjct: 162 -CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 220
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 221 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 272
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 273 NPNMRPTFLEI 283
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHR+LAARN
Sbjct: 141 DGMAYLNAKKFVHRNLAARN---------------------------------------- 160
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M YE+DYY K LP+RWMA ESL G TT SD+WSF
Sbjct: 161 -CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 220 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 272 NPNMRPTFLEI 282
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 116/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHRDLAARN
Sbjct: 141 DGMAYLNAKKFVHRDLAARN---------------------------------------- 160
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M YE+ YY K LP+RWMA ESL G TT SD+WSF
Sbjct: 161 -CMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 220 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 272 NPKMRPTFLEI 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 116/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ NP + S +I MA +IA
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 139 DGMAYLNANKFVHRDLAARN---------------------------------------- 158
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 159 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 217
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 218 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 269
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 270 NPKMRPSFLEI 280
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 116/251 (46%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ NP + S +I MA +IA
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 149 DGMAYLNANKFVHRDLAARN---------------------------------------- 168
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 169 -CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 228 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 279
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 280 NPKMRPSFLEI 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 57/265 (21%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQ-----ENPA---ISYGC 55
L+ ++VR GVC+ P+ + EY GDL+ FL+ H +++ E+ A + G
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ +A+Q+A+GM YL VHRDLA RN
Sbjct: 160 LLAVASQVAAGMVYLAGLHFVHRDLATRN------------------------------- 188
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
C+VG+ +KI D M Y +DYY + LPIRWM ES+L K T
Sbjct: 189 ----------CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
T+SDVWSF V LWEI + Q P+ +L+N + I+ ++ + L RP C E++
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQ-PWYQLSNTEAIDCI-------TQGRELERPRACPPEVY 290
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQ 260
+M CW+ R ++H LQ
Sbjct: 291 AIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 115/251 (45%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 136 DGMAYLNANKFVHRDLAARN---------------------------------------- 155
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
C V +++T+KI D M YE+DYY K LP+RWM+ ESL G TT SDVWSF
Sbjct: 156 -CXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 214
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C + +LM CW+
Sbjct: 215 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLLELMRMCWQY 266
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 267 NPKMRPSFLEI 277
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 57/265 (21%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQ-----ENPA---ISYGC 55
L+ ++VR GVC+ P+ + EY GDL+ FL+ H +++ E+ A + G
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 136
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ +A+Q+A+GM YL VHRDLA RN
Sbjct: 137 LLAVASQVAAGMVYLAGLHFVHRDLATRN------------------------------- 165
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
C+VG+ +KI D M Y +DYY + LPIRWM ES+L K T
Sbjct: 166 ----------CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 215
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
T+SDVWSF V LWEI + Q P+ +L+N + I+ ++ + L RP C E++
Sbjct: 216 TESDVWSFGVVLWEIFTYGKQ-PWYQLSNTEAIDCI-------TQGRELERPRACPPEVY 267
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQ 260
+M CW+ R ++H LQ
Sbjct: 268 AIMRGCWQREPQQRHSIKDVHARLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 57/265 (21%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQ-----ENPA---ISYGC 55
L+ ++VR GVC+ P+ + EY GDL+ FL+ H +++ E+ A + G
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 130
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ +A+Q+A+GM YL VHRDLA RN
Sbjct: 131 LLAVASQVAAGMVYLAGLHFVHRDLATRN------------------------------- 159
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
C+VG+ +KI D M Y +DYY + LPIRWM ES+L K T
Sbjct: 160 ----------CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 209
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
T+SDVWSF V LWEI + Q P+ +L+N + I+ ++ + L RP C E++
Sbjct: 210 TESDVWSFGVVLWEIFTYGKQ-PWYQLSNTEAIDCI-------TQGRELERPRACPPEVY 261
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQ 260
+M CW+ R ++H LQ
Sbjct: 262 AIMRGCWQREPQQRHSIKDVHARLQ 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 114/251 (45%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHRDLAARN
Sbjct: 141 DGMAYLNAKKFVHRDLAARN---------------------------------------- 160
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M E+D K LP+RWMA ESL G TT SD+WSF
Sbjct: 161 -CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 220 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 272 NPNMRPTFLEI 282
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 114/251 (45%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHRDLAARN
Sbjct: 141 DGMAYLNAKKFVHRDLAARN---------------------------------------- 160
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M E+D K LP+RWMA ESL G TT SD+WSF
Sbjct: 161 -CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 220 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 272 NPKMRPTFLEI 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 114/251 (45%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---IFMATQIA 64
++VR++GV S P + E GDL ++L+ ++ NP L I MA +IA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL ++ VHRDLAARN
Sbjct: 138 DGMAYLNAKKFVHRDLAARN---------------------------------------- 157
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV ++T+KI D M E+D K LP+RWMA ESL G TT SD+WSF
Sbjct: 158 -CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 216
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV++ YL +P C + + DLM CW+
Sbjct: 217 VVLWEITSLAEQ-PYQGLSNEQVLKFV-------MDGGYLDQPDNCPERVTDLMRMCWQF 268
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 269 NPKMRPTFLEI 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 114/251 (45%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 143 DGMAYLNANKFVHRDLAARN---------------------------------------- 162
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M E+D K LP+RWM+ ESL G TT SDVWSF
Sbjct: 163 -CMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C +F+LM CW+
Sbjct: 222 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLFELMRMCWQY 273
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 274 NPKMRPSFLEI 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 125/262 (47%), Gaps = 58/262 (22%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENP---------AISYG 54
L+ PN+V ++GV + + P+S I YC GDL FL + + +S A+
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT 114
+ + QIA+GM+YL S +VH+DLA RN +V Y+
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-----------------YD-------- 180
Query: 115 KARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN 174
+KISD ++ Y +DYY + LPIRWMA E+++ GK
Sbjct: 181 ----------------KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF 224
Query: 175 TTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
+ SD+WS+ V LWE+ + Q PY +N+ V+E + +Q LP P C +
Sbjct: 225 SIDSDIWSYGVVLWEVFSYGLQ-PYCGYSNQDVVEMIRN-------RQVLPCPDDCPAWV 276
Query: 235 FDLMLECWKTNETDRPRFSEIH 256
+ LM+ECW + RPRF +IH
Sbjct: 277 YALMIECWNEFPSRRPRFKDIH 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 125/262 (47%), Gaps = 58/262 (22%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENP---------AISYG 54
L+ PN+V ++GV + + P+S I YC GDL FL + + +S A+
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT 114
+ + QIA+GM+YL S +VH+DLA RN +V Y+
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-----------------YD-------- 163
Query: 115 KARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN 174
+KISD ++ Y +DYY + LPIRWMA E+++ GK
Sbjct: 164 ----------------KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF 207
Query: 175 TTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
+ SD+WS+ V LWE+ + Q PY +N+ V+E + +Q LP P C +
Sbjct: 208 SIDSDIWSYGVVLWEVFSYGLQ-PYCGYSNQDVVEMIRN-------RQVLPCPDDCPAWV 259
Query: 235 FDLMLECWKTNETDRPRFSEIH 256
+ LM+ECW + RPRF +IH
Sbjct: 260 YALMIECWNEFPSRRPRFKDIH 281
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 141
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 142 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF---------------------- 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 180 --------GLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 221
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 222 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 273
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 274 CWQKDRNNRPKFEQIVSILDK 294
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD + AR+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL---------------ARV-- 196
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 197 -------------LEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF---------------------- 162
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 163 --------GLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 205 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 256
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 257 CWQKDRNNRPKFEQIVSILDK 277
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLGRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + EY E G L +FL+ H+ + L+ M
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGML 151
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 152 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 188
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 189 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 231
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 232 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 283
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 284 CWQKDRNNRPKFEQIVSILDK 304
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 113/251 (45%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAI---SYGCLIFMATQIA 64
++VR++GV S P I E GDL ++L+ + NP + S +I MA +IA
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM YL + VHRDLAARN
Sbjct: 134 DGMAYLNANKFVHRDLAARN---------------------------------------- 153
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
CMV +++T+KI D M E+D K LP+RWM+ ESL G TT SDVWSF
Sbjct: 154 -CMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 212
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI Q PY L+NEQV+ + L +P C + +LM CW+
Sbjct: 213 VVLWEIATLAEQ-PYQGLSNEQVLRFV-------MEGGLLDKPDNCPDMLLELMRMCWQY 264
Query: 245 NETDRPRFSEI 255
N RP F EI
Sbjct: 265 NPKMRPSFLEI 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + E E G L +FL+ H+ + L+ M
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVGML 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF---------------------- 162
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 163 --------GLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 205 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 256
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 257 CWQKDRNNRPKFEQIVSILDK 277
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + E E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+SD
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 190
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW + E++ K T+ SDV
Sbjct: 191 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 66/272 (24%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQ-----------------IHNCNSQENP 49
P+++++ G CS + P+ I EY ++G L FL+ + + +
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 50 AISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY 109
A++ G LI A QI+ GM+YL +VHRDLAARN +V +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE-------------------- 185
Query: 110 YLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESL 169
+KISD + YE D Y+ ++ R+P++WMA ESL
Sbjct: 186 ---------------------GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL 224
Query: 170 LLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
TT+SDVWSF V LWEI + PY + E++ ++ + RP
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEI-VTLGGNPYPGIPPERLFNLLKTGHR-------MERPDN 276
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
C +E++ LML+CWK RP F++I L++
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + P+ + E E G L +FL+ H+ + L+ M
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVGML 153
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGMKYL VHRDLAARN ++ N K+S D+ LS P
Sbjct: 154 RGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVS-----------DFGLSRVLEDDP- 201
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A Y + ++PIRW + E++ K T+ SDV
Sbjct: 202 ------------------EAAYTTR----------GGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + LWE++ + +RPY E++N+ VI+ Y+ LP P C ++ LML+
Sbjct: 234 WSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLD 285
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ + +RP+F +I L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYA 497
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG-----------DFGLS-------- 538
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 539 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 576 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 627
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 628 CWAYDPSRRPRFTEL 642
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 54/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++ + GV + P+ + EY E G L TFL+ + + + L+ M
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK------KNDGQFTVIQLVGML 130
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
I++GMKYL VHRDLAARN ++ N K+SD
Sbjct: 131 RGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSD----------------------- 167
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW A E++ K T+ SDV
Sbjct: 168 -------FGLSRVLEDDPEAAYTTR----------GGKIPIRWTAPEAIAFRKFTSASDV 210
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + +WE++ + +RPY E+TN+ VI+ Y+ LP P C ++ LML+
Sbjct: 211 WSYGIVMWEVVSY-GERPYWEMTNQDVIKAVEEGYR-------LPSPMDCPAALYQLMLD 262
Query: 241 CWKTNETDRPRFSEI 255
CW+ RP+F EI
Sbjct: 263 CWQKERNSRPKFDEI 277
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 93 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 145
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG-----------DFGLS-------- 186
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 187 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 223
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 224 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 275
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 276 CWAYDPSRRPRFTEL 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG-----------DFGLS-------- 163
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 164 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 201 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 252
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 253 CWAYDPSRRPRFTEL 267
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL-----------GDFGLS-------- 158
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 159 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 196 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 247
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 248 CWAYDPSRRPRFTEL 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 67 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL-----------GDFGLS-------- 160
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 161 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 198 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 249
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 250 CWAYDPSRRPRFTEL 264
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 68 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL-----------GDFGLS-------- 161
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 162 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 199 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 250
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 251 CWAYDPSRRPRFTEL 265
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL-----------GDFGLS-------- 158
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 159 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 196 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 247
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 248 CWAYDPSRRPRFTEL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 62 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYA 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL-----------GDFGLS-------- 155
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 156 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 192
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 193 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 244
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 245 CWAYDPSRRPRFTEL 259
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 123/254 (48%), Gaps = 54/254 (21%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N++R+ GV S P+ I EY E G L FL+ +++ S L+ M IA+GM
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLR------EKDGEFSVLQLVGMLRGIAAGM 160
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
KYL + + VHRDLAARN +V N K+SD
Sbjct: 161 KYLANMNYVHRDLAARNILVNSNLVCKVSDF----------------------------- 191
Query: 128 VGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTL 187
G + ++ A Y + + ++PIRW A E++ K T+ SDVWSF + +
Sbjct: 192 -GLSRVLEDDPEATYTT----------SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240
Query: 188 WEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNET 247
WE++ + +RPY EL+N +V++ + ++ LP P C I+ LM++CW+
Sbjct: 241 WEVMTY-GERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQERA 292
Query: 248 DRPRFSEIHLFLQR 261
RP+F++I L +
Sbjct: 293 RRPKFADIVSILDK 306
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 113/254 (44%), Gaps = 55/254 (21%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN+VR+IGVC+ + PI + E + GD TFL+ E + L+ M A+G
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT------EGARLRVKTLLQMVGDAAAG 225
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANC 126
M+YLES+ +HRDLAARNC+V + +KISD M + Y S ++P++W A
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP- 284
Query: 127 MVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVT 186
E+L G+ +++SDVWSF +
Sbjct: 285 ----------------------------------------EALNYGRYSSESDVWSFGIL 304
Query: 187 LWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNE 246
LWE PY L+N+Q E K LP P C +F LM +CW
Sbjct: 305 LWETF-SLGASPYPNLSNQQTREFV-------EKGGRLPCPELCPDAVFRLMEQCWAYEP 356
Query: 247 TDRPRFSEIHLFLQ 260
RP FS I+ LQ
Sbjct: 357 GQRPSFSTIYQELQ 370
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 120/255 (47%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYA 497
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V +K+ D +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS------------------- 538
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 539 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 576 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 627
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 628 CWAYDPSRRPRFTEL 642
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 66/272 (24%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQ-----------------IHNCNSQENP 49
P+++++ G CS + P+ I EY ++G L FL+ + + +
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 50 AISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY 109
A++ G LI A QI+ GM+YL +VHRDLAARN +V +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAE-------------------- 185
Query: 110 YLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESL 169
+KISD + YE D + ++ R+P++WMA ESL
Sbjct: 186 ---------------------GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 170 LLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
TT+SDVWSF V LWEI + PY + E++ ++ + RP
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEI-VTLGGNPYPGIPPERLFNLLKTGHR-------MERPDN 276
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
C +E++ LML+CWK RP F++I L++
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 66/272 (24%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQ-----------------IHNCNSQENP 49
P+++++ G CS + P+ I EY ++G L FL+ + + +
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 50 AISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY 109
A++ G LI A QI+ GM+YL +VHRDLAARN +V +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE-------------------- 185
Query: 110 YLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESL 169
+KISD + YE D + ++ R+P++WMA ESL
Sbjct: 186 ---------------------GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 170 LLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
TT+SDVWSF V LWEI + PY + E++ ++ + RP
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEI-VTLGGNPYPGIPPERLFNLLKTGHR-------MERPDN 276
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
C +E++ LML+CWK RP F++I L++
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V N +K+ D+ LS
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG-----------DFGLS-------- 158
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M + K +K +LPI+WMA ES+ + T+ SDV
Sbjct: 159 RYMEDSTXXKA-----------------------SKGKLPIKWMAPESINFRRFTSASDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 196 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 247
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 248 CWAYDPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M P++V++IGV TE+P+ I E C G+L +FLQ+ ++ LI A
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+++ + YLES+ VHRD+AARN +V +K+ D+ LS
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLG-----------DFGLS-------- 158
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R+M E Y +K +LPI+WMA ES+ + T+ SDV
Sbjct: 159 RYM-----------------------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F V +WEIL+H +P+ + N VI + + LP P C ++ LM +
Sbjct: 196 WMFGVCMWEILMH-GVKPFQGVKNNDVIGRIEN-------GERLPMPPNCPPTLYSLMTK 247
Query: 241 CWKTNETDRPRFSEI 255
CW + + RPRF+E+
Sbjct: 248 CWAYDPSRRPRFTEL 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 112/255 (43%), Gaps = 54/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + + EY E G L TFL+ H+ + L+ M
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ------FTIMQLVGML 157
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ +GM+YL VHRDLAARN +V N K+S D+ LS P
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVS-----------DFGLSRVLEDDP- 205
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D + T ++PIRW A E++ ++ SDV
Sbjct: 206 ----------------------------DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+L + +RPY +TN VI + Y+ LP P C + LML+
Sbjct: 238 WSFGVVMWEVLAY-GERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLD 289
Query: 241 CWKTNETDRPRFSEI 255
CW + RPRFS+I
Sbjct: 290 CWHKDRAQRPRFSQI 304
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 112/255 (43%), Gaps = 54/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++R+ GV + + EY E G L TFL+ H+ + L+ M
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ------FTIMQLVGML 157
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ +GM+YL VHRDLAARN +V N K+S D+ LS P
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVS-----------DFGLSRVLEDDP- 205
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D + T ++PIRW A E++ ++ SDV
Sbjct: 206 ----------------------------DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+L + +RPY +TN VI + Y+ LP P C + LML+
Sbjct: 238 WSFGVVMWEVLAY-GERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLD 289
Query: 241 CWKTNETDRPRFSEI 255
CW + RPRFS+I
Sbjct: 290 CWHKDRAQRPRFSQI 304
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 54/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++ + GV + P+ I E+ E G L +FL+ Q + + L+ M
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR------QNDGQFTVIQLVGML 141
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IA+GMKYL + VHRDLAARN +V N K+S D+ LS
Sbjct: 142 RGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVS-----------DFGLS-------- 182
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R++ + YT S ++PIRW A E++ K T+ SDV
Sbjct: 183 RFLEDDTSDPTYT-------------------SALGGKIPIRWTAPEAIQYRKFTSASDV 223
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQY-LPRPATCQKEIFDLML 239
WS+ + +WE++ + +RPY ++TN+ VI N +Q Y LP P C + LML
Sbjct: 224 WSYGIVMWEVMSY-GERPYWDMTNQDVI--------NAIEQDYRLPPPMDCPSALHQLML 274
Query: 240 ECWKTNETDRPRFSEI 255
+CW+ + RP+F +I
Sbjct: 275 DCWQKDRNHRPKFGQI 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN+V + GV + P+ + E+ E G L FL+ H+ + L+ M
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ------FTVIQLVGML 151
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IA+GM+YL VHRDLAARN +V N K+SD
Sbjct: 152 RGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSD----------------------- 188
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + I+ A+Y + T ++P+RW A E++ K T+ SDV
Sbjct: 189 -------FGLSRVIEDDPEAVYTT----------TGGKIPVRWTAPEAIQYRKFTSASDV 231
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + +WE++ + +RPY +++N+ VI+ Y+ LP P C + LML+
Sbjct: 232 WSYGIVMWEVMSY-GERPYWDMSNQDVIKAIEEGYR-------LPAPMDCPAGLHQLMLD 283
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ +RP+F +I L +
Sbjct: 284 CWQKERAERPKFEQIVGILDK 304
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 112/254 (44%), Gaps = 55/254 (21%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN+VR+IGVC+ + PI + E + GD TFL+ E + L+ M A+G
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT------EGARLRVKTLLQMVGDAAAG 225
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANC 126
M+YLES+ +HRDLAARNC+V + +KISD M + S ++P++W A
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP- 284
Query: 127 MVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVT 186
E+L G+ +++SDVWSF +
Sbjct: 285 ----------------------------------------EALNYGRYSSESDVWSFGIL 304
Query: 187 LWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNE 246
LWE PY L+N+Q E K LP P C +F LM +CW
Sbjct: 305 LWETF-SLGASPYPNLSNQQTREFV-------EKGGRLPCPELCPDAVFRLMEQCWAYEP 356
Query: 247 TDRPRFSEIHLFLQ 260
RP FS I+ LQ
Sbjct: 357 GQRPSFSTIYQELQ 370
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 156
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 157 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 217 LPVKW-----------------------------------------MALESLQTQKFTTK 235
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 236 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 287
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 288 MLKCWHPKAEMRPSFSEL 305
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 157
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 158 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 218 LPVKW-----------------------------------------MALESLQTQKFTTK 236
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 237 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 288
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 289 MLKCWHPKAEMRPSFSEL 306
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 130
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 131 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 191 LPVKW-----------------------------------------MALESLQTQKFTTK 209
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 210 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 261
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 262 MLKCWHPKAEMRPSFSEL 279
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 138
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 139 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 199 LPVKW-----------------------------------------MALESLQTQKFTTK 217
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 218 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 269
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 270 MLKCWHPKAEMRPSFSEL 287
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 138
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 139 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 199 LPVKW-----------------------------------------MALESLQTQKFTTK 217
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 218 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 269
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 270 MLKCWHPKAEMRPSFSEL 287
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 136
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 137 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 197 LPVKW-----------------------------------------MALESLQTQKFTTK 215
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 216 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 267
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 268 MLKCWHPKAEMRPSFSEL 285
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 137
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 138 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 198 LPVKW-----------------------------------------MALESLQTQKFTTK 216
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 217 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 268
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 269 MLKCWHPKAEMRPSFSEL 286
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++ + GV + P+ I EY E G L FL+ + + + L+ M
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR------KNDGRFTVIQLVGML 116
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
I SGMKYL VHRDLAARN +V N K+SD
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDF---------------------- 154
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW A E++ K T+ SDV
Sbjct: 155 --------GMSRVLEDDPEAAYTTR----------GGKIPIRWTAPEAIAYRKFTSASDV 196
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + +WE++ + +RPY +++N+ VI+ Y+ LP P C + LML+
Sbjct: 197 WSYGIVMWEVMSY-GERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLD 248
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ +DRP+F +I L +
Sbjct: 249 CWQKERSDRPKFGQIVNMLDK 269
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 133
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 134 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 194 LPVKW-----------------------------------------MALESLQTQKFTTK 212
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 213 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 264
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 265 MLKCWHPKAEMRPSFSEL 282
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 135
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ +YY + T A+
Sbjct: 136 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 196 LPVKW-----------------------------------------MALESLQTQKFTTK 214
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 215 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 266
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 267 MLKCWHPKAEMRPSFSEL 284
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 54/261 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++ + GV + P+ I EY E G L FL+ + + + L+ M
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR------KNDGRFTVIQLVGML 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
I SGMKYL VHRDLAARN +V N K+SD
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDF---------------------- 160
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
G + ++ A Y + ++PIRW A E++ K T+ SDV
Sbjct: 161 --------GMSRVLEDDPEAAYTTR----------GGKIPIRWTAPEAIAYRKFTSASDV 202
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ + +WE++ + +RPY +++N+ VI+ Y+ LP P C + LML+
Sbjct: 203 WSYGIVMWEVMSY-GERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLD 254
Query: 241 CWKTNETDRPRFSEIHLFLQR 261
CW+ +DRP+F +I L +
Sbjct: 255 CWQKERSDRPKFGQIVNMLDK 275
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 56/257 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M + PN++R+ GV + P+ + E+ E G L +FL++++ + L+ M
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------FTVIQLVGML 122
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGM+YL VHRDLAARN +V N K+ SD+ LS
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKV-----------SDFGLS-------- 163
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESD-YYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
+ SD Y S ++PIRW A E++ K T+ SD
Sbjct: 164 --------------------RFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASD 203
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQY-LPRPATCQKEIFDLM 238
WS+ + +WE++ +RPY +++N+ VI N +Q Y LP P C + LM
Sbjct: 204 AWSYGIVMWEVM-SFGERPYWDMSNQDVI--------NAIEQDYRLPPPPDCPTSLHQLM 254
Query: 239 LECWKTNETDRPRFSEI 255
L+CW+ + RPRF ++
Sbjct: 255 LDCWQKDRNARPRFPQV 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 121/256 (47%), Gaps = 54/256 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++ + GV + P+ I E+ E G L +FL+ Q + + L+ M
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR------QNDGQFTVIQLVGML 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IA+GMKYL + VHR LAARN +V N K+S D+ LS
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVS-----------DFGLS-------- 156
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
R++ + YT S ++PIRW A E++ K T+ SDV
Sbjct: 157 RFLEDDTSDPTYT-------------------SALGGKIPIRWTAPEAIQYRKFTSASDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQY-LPRPATCQKEIFDLML 239
WS+ + +WE++ + +RPY ++TN+ VI N +Q Y LP P C + LML
Sbjct: 198 WSYGIVMWEVMSY-GERPYWDMTNQDVI--------NAIEQDYRLPPPMDCPSALHQLML 248
Query: 240 ECWKTNETDRPRFSEI 255
+CW+ + RP+F +I
Sbjct: 249 DCWQKDRNHRPKFGQI 264
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 118/272 (43%), Gaps = 64/272 (23%)
Query: 1 MCSLKD-PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPA--------- 50
+C L PN++ ++G C + EY G+L FL+ + +PA
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTAS 137
Query: 51 -ISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY 109
+S L+ A +A GM YL + +HRDLAARN +V
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---------------------- 175
Query: 110 YLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESL 169
G+NY KI+D + + Y+ T RLP+RWMA ESL
Sbjct: 176 -------------------GENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESL 213
Query: 170 LLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
TT SDVWS+ V LWEI + PY +T C+ Y+ + L +P
Sbjct: 214 NYSVYTTNSDVWSYGVLLWEI-VSLGGTPYCGMT-------CAELYEKLPQGYRLEKPLN 265
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
C E++DLM +CW+ +RP F++I + L R
Sbjct: 266 CDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 118/272 (43%), Gaps = 64/272 (23%)
Query: 1 MCSLKD-PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPA--------- 50
+C L PN++ ++G C + EY G+L FL+ + +PA
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTAS 127
Query: 51 -ISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY 109
+S L+ A +A GM YL + +HRDLAARN +V
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---------------------- 165
Query: 110 YLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESL 169
G+NY KI+D + + Y+ T RLP+RWMA ESL
Sbjct: 166 -------------------GENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESL 203
Query: 170 LLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
TT SDVWS+ V LWEI + PY +T C+ Y+ + L +P
Sbjct: 204 NYSVYTTNSDVWSYGVLLWEI-VSLGGTPYCGMT-------CAELYEKLPQGYRLEKPLN 255
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
C E++DLM +CW+ +RP F++I + L R
Sbjct: 256 CDDEVYDLMRQCWREKPYERPSFAQILVSLNR 287
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 57/267 (21%)
Query: 1 MCSLKDPNLVRVIGVC------STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYG 54
M PN++R++GVC P+ I + ++GDL T+L + I
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPM-VILPFMKYGDLHTYLLYSRLETGPK-HIPLQ 147
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT 114
L+ IA GM+YL +R+ +HRDLAARN
Sbjct: 148 TLLKFMVDIALGMEYLSNRNFLHRDLAARN------------------------------ 177
Query: 115 KARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN 174
CM+ + T+ ++D + Y DYY A++P++W+A ESL
Sbjct: 178 -----------CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY 226
Query: 175 TTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
T+KSDVW+F VT+WEI PY + N ++ + H ++ L +P C E+
Sbjct: 227 TSKSDVWAFGVTMWEIATR-GMTPYPGVQNHEMYDYLLHGHR-------LKQPEDCLDEL 278
Query: 235 FDLMLECWKTNETDRPRFSEIHLFLQR 261
+++M CW+T+ DRP FS + L L++
Sbjct: 279 YEIMYSCWRTDPLDRPTFSVLRLQLEK 305
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 56/257 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M + PN++R+ GV + P+ + E+ E G L +FL++++ + L+ M
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------FTVIQLVGML 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
IASGM+YL VHRDLAARN +V N K+ SD+ LS
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKV-----------SDFGLS-------- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESD-YYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
+ SD S ++PIRW A E++ K T+ SD
Sbjct: 166 --------------------RFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASD 205
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQY-LPRPATCQKEIFDLM 238
WS+ + +WE++ +RPY +++N+ VI N +Q Y LP P C + LM
Sbjct: 206 AWSYGIVMWEVM-SFGERPYWDMSNQDVI--------NAIEQDYRLPPPPDCPTSLHQLM 256
Query: 239 LECWKTNETDRPRFSEI 255
L+CW+ + RPRF ++
Sbjct: 257 LDCWQKDRNARPRFPQV 273
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 118/272 (43%), Gaps = 64/272 (23%)
Query: 1 MCSLKD-PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPA--------- 50
+C L PN++ ++G C + EY G+L FL+ + +PA
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTAS 134
Query: 51 -ISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY 109
+S L+ A +A GM YL + +HR+LAARN +V
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILV---------------------- 172
Query: 110 YLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESL 169
G+NY KI+D + + Y+ T RLP+RWMA ESL
Sbjct: 173 -------------------GENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESL 210
Query: 170 LLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
TT SDVWS+ V LWEI + PY +T C+ Y+ + L +P
Sbjct: 211 NYSVYTTNSDVWSYGVLLWEI-VSLGGTPYCGMT-------CAELYEKLPQGYRLEKPLN 262
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
C E++DLM +CW+ +RP F++I + L R
Sbjct: 263 CDDEVYDLMRQCWREKPYERPSFAQILVSLNR 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 143
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 144 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 168
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHY--ESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + Y E D + T A+LP++WMA ESL K TTK
Sbjct: 169 ------CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 222
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 223 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 274
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 275 MLKCWHPKAEMRPSFSEL 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 197
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 198 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 222
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHY--ESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + Y E D + T A+LP++WMA ESL K TTK
Sbjct: 223 ------CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 277 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 328
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 329 MLKCWHPKAEMRPSFSEL 346
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 138
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 139 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 163
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHY--ESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + Y E D + T A+LP++WMA ESL K TTK
Sbjct: 164 ------CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 218 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 269
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 270 MLKCWHPKAEMRPSFSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 139
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 140 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 164
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHY--ESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + Y E D + T A+LP++WMA ESL K TTK
Sbjct: 165 ------CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 219 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 270
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 271 MLKCWHPKAEMRPSFSEL 288
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 138
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 139 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 163
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHY--ESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + Y E D + T A+LP++WMA ESL K TTK
Sbjct: 164 ------CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 218 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 269
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 270 MLKCWHPKAEMRPSFSEL 287
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 136
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 137 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 161
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHY--ESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + Y E D + T A+LP++WMA ESL K TTK
Sbjct: 162 ------CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 216 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 267
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 268 MLKCWHPKAEMRPSFSEL 285
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV++ GVC + PI + E+ E G LS +L+ + + L+ M
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMC 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM YLE ++HRDLAARN
Sbjct: 110 LDVCEGMAYLEEASVIHRDLAARN------------------------------------ 133
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
C+VG+N IK+SD M D Y S T + P++W + E + ++KSDV
Sbjct: 134 -----CLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+ + PY +N +V+E+ S + + Y PR A+ ++ +M
Sbjct: 188 WSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-----RLYKPRLASTH--VYQIMNH 239
Query: 241 CWKTNETDRPRFSEI 255
CWK DRP FS +
Sbjct: 240 CWKERPEDRPAFSRL 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPA-------ISYGCLIFMA 60
N+V ++G C+ P+ I EYC +GDL FL+ + + +PA +S L+ +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+Q+A GM +L S++ +HRD+AARN ++ + KI D + AR
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---------------AR--- 212
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ M NY +K ARLP++WMA ES+ T +SDV
Sbjct: 213 ----DIMNDSNYIVK-------------------GNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 181 WSFAVTLWEILIHCNQRPYAE-LTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
WS+ + LWEI PY L N + + YQ + +PA K I+ +M
Sbjct: 250 WSYGILLWEIF-SLGLNPYPGILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQ 301
Query: 240 ECWKTNETDRPRFSEIHLFLQRK 262
CW T RP F +I FLQ +
Sbjct: 302 ACWALEPTHRPTFQQICSFLQEQ 324
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 118/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVKD--LIGF 137
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL--SDTKAR 117
Q+A GMKYL S+ VHRDLAARNCM+ + +T+K++D + Y+ + + T A+
Sbjct: 138 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
LP++W MA ESL K TTK
Sbjct: 198 LPVKW-----------------------------------------MALESLQTQKFTTK 216
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 217 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 268
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 269 MLKCWHPKAEMRPSFSEL 286
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 57/263 (21%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC-------LIFMA 60
N+V ++G C+ P+ I EYC +GDL FL+ + + +PA + L+ +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+Q+A GM +L S++ +HRD+AARN ++ + KI D + AR
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---------------AR--- 212
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ M NY +K ARLP++WMA ES+ T +SDV
Sbjct: 213 ----DIMNDSNYIVK-------------------GNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 181 WSFAVTLWEILIHCNQRPYAE-LTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
WS+ + LWEI PY L N + + YQ + +PA K I+ +M
Sbjct: 250 WSYGILLWEIF-SLGLNPYPGILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQ 301
Query: 240 ECWKTNETDRPRFSEIHLFLQRK 262
CW T RP F +I FLQ +
Sbjct: 302 ACWALEPTHRPTFQQICSFLQEQ 324
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 59/265 (22%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGCLIF 58
N+V ++G C+ P+ I EYC +GDL FL+ ++ N NP +S L+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
++Q+A GM +L S++ +HRD+AARN ++ + KI D + AR
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---------------AR- 214
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
+ M NY +K ARLP++WMA ES+ T +S
Sbjct: 215 ------DIMNDSNYIVK-------------------GNARLPVKWMAPESIFDCVYTVQS 249
Query: 179 DVWSFAVTLWEIL-IHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
DVWS+ + LWEI + N P L N + + YQ + +PA K I+ +
Sbjct: 250 DVWSYGILLWEIFSLGLNPYP-GILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSI 301
Query: 238 MLECWKTNETDRPRFSEIHLFLQRK 262
M CW T RP F +I FLQ +
Sbjct: 302 MQACWALEPTHRPTFQQICSFLQEQ 326
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 53/259 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIH---NCNSQENPAISYGCLIFMATQIA 64
N+V ++G C+ P+ I EYC +GDL FL+ + + ++ + L+ ++Q+A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM +L S++ +HRD+AARN ++ + KI D + AR
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---------------AR------- 200
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ M NY +K ARLP++WMA ES+ T +SDVWS+
Sbjct: 201 DIMNDSNYIVK-------------------GNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 185 VTLWEILIHCNQRPYAE-LTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWK 243
+ LWEI PY L N + + YQ + +PA K I+ +M CW
Sbjct: 242 ILLWEIF-SLGLNPYPGILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQACWA 293
Query: 244 TNETDRPRFSEIHLFLQRK 262
T RP F +I FLQ +
Sbjct: 294 LEPTHRPTFQQICSFLQEQ 312
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 58/267 (21%)
Query: 1 MCSLKDPNLVRVIGV-----CSTEDPIS-TIQEYCEFGDLSTFLQIHNCNSQENP-AISY 53
M P++ +++GV PI I + + GDL FL ENP +
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG--ENPFNLPL 136
Query: 54 GCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSD 113
L+ IA GM+YL SR+ +HRDLAARN
Sbjct: 137 QTLVRFMVDIACGMEYLSSRNFIHRDLAARN----------------------------- 167
Query: 114 TKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGK 173
CM+ ++ T+ ++D + Y DYY ++LP++W+A ESL
Sbjct: 168 ------------CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL 215
Query: 174 NTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKE 233
T SDVW+F VT+WEI+ Q PYA + N ++ Y L +P C +E
Sbjct: 216 YTVHSDVWAFGVTMWEIMTR-GQTPYAGIENAEI-------YNYLIGGNRLKQPPECMEE 267
Query: 234 IFDLMLECWKTNETDRPRFSEIHLFLQ 260
++DLM +CW + RP F+ + + L+
Sbjct: 268 VYDLMYQCWSADPKQRPSFTCLRMELE 294
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 53/259 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIH---NCNSQENPAISYGCLIFMATQIA 64
N+V ++G C+ P+ I EYC +GDL FL+ + + ++ + L+ ++Q+A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
GM +L S++ +HRD+AARN ++ + KI D + AR
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---------------AR------- 208
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ M NY +K ARLP++WMA ES+ T +SDVWS+
Sbjct: 209 DIMNDSNYIVK-------------------GNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 185 VTLWEIL-IHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWK 243
+ LWEI + N P L N + + YQ + +PA K I+ +M CW
Sbjct: 250 ILLWEIFSLGLNPYP-GILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQACWA 301
Query: 244 TNETDRPRFSEIHLFLQRK 262
T RP F +I FLQ +
Sbjct: 302 LEPTHRPTFQQICSFLQEQ 320
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M PN++ + GV + P+ I EY E G L FL+ + + + L+ M
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR------KNDGRFTVIQLVGML 137
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
I SGMKYL VHRDLAARN +
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNIL---------------------------------- 163
Query: 121 RWMANCMVGKNYTIKISDHAM-YCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
V N K+SD M + + + ++PIRW A E++ K T+ SD
Sbjct: 164 -------VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 216
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
VWS+ + +WE++ + +RPY +++N+ VI+ Y+ LP P C + LML
Sbjct: 217 VWSYGIVMWEVMSY-GERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLML 268
Query: 240 ECWKTNETDRPRFSEIHLFLQR 261
+CW+ +DRP+F +I L +
Sbjct: 269 DCWQKERSDRPKFGQIVNMLDK 290
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV++ GVC + PI + E+ E G LS +L+ + + L+ M
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT------QRGLFAAETLLGMC 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM YLE ++HRDLAARNC+VG+N IK+SD M D Y S T + P+
Sbjct: 111 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPV 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W + E + ++KSDV
Sbjct: 170 KWASP-----------------------------------------EVFSFSRYSSKSDV 188
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+ + PY +N +V+E+ S + + Y PR A+ ++ +M
Sbjct: 189 WSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-----RLYKPRLASTH--VYQIMNH 240
Query: 241 CWKTNETDRPRFSEI 255
CW+ DRP FS +
Sbjct: 241 CWRERPEDRPAFSRL 255
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV++ GVC + PI + E+ E G LS +L+ + + L+ M
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMC 129
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM YLE ++HRDLAARN
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARN------------------------------------ 153
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
C+VG+N IK+SD M D Y S T + P++W + E + ++KSDV
Sbjct: 154 -----CLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+ + PY +N +V+E+ S + + Y PR A+ ++ +M
Sbjct: 208 WSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-----RLYKPRLASTH--VYQIMNH 259
Query: 241 CWKTNETDRPRFSEI 255
CWK DRP FS +
Sbjct: 260 CWKERPEDRPAFSRL 274
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 57 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 132
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 133 ---ANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 189 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 240
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 241 CWKERPEDRPTFDYLRSVLE 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV++ GVC + PI + E+ E G LS +L+ + + L+ M
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMC 107
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM YLE ++HRDLAARN
Sbjct: 108 LDVCEGMAYLEEACVIHRDLAARN------------------------------------ 131
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
C+VG+N IK+SD M D Y S T + P++W + E + ++KSDV
Sbjct: 132 -----CLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+ + PY +N +V+E+ S + + Y PR A+ ++ +M
Sbjct: 186 WSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-----RLYKPRLASTH--VYQIMNH 237
Query: 241 CWKTNETDRPRFSEI 255
CWK DRP FS +
Sbjct: 238 CWKERPEDRPAFSRL 252
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV++ GVC + PI + E+ E G LS +L+ + + L+ M
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMC 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM YLE ++HRDLAARN
Sbjct: 110 LDVCEGMAYLEEACVIHRDLAARN------------------------------------ 133
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
C+VG+N IK+SD M D Y S T + P++W + E + ++KSDV
Sbjct: 134 -----CLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+ + PY +N +V+E+ S + + Y PR A+ ++ +M
Sbjct: 188 WSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-----RLYKPRLASTH--VYQIMNH 239
Query: 241 CWKTNETDRPRFSEI 255
CWK DRP FS +
Sbjct: 240 CWKERPEDRPAFSRL 254
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 58/258 (22%)
Query: 1 MCSLKDPNLVRVIGVC-STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M PN++ ++G+C +E + Y + GDL F++ N NP + LI
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----NETHNPTVK--DLIGF 139
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GMK+L S+ VHRDLAARN
Sbjct: 140 GLQVAKGMKFLASKKFVHRDLAARN----------------------------------- 164
Query: 120 IRWMANCMVGKNYTIKISDHAMYCS--HYESDYYLSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ + +T+K++D + E D + T A+LP++WMA ESL K TTK
Sbjct: 165 ------CMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE++ PY ++ + + Q + L +P C ++++
Sbjct: 219 SDVWSFGVLLWELMTR-GAPPYPDVNTFDI---TVYLLQG----RRLLQPEYCPDPLYEV 270
Query: 238 MLECWKTNETDRPRFSEI 255
ML+CW RP FSE+
Sbjct: 271 MLKCWHPKAEMRPSFSEL 288
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 72 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 125
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 147
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 148 ---ANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 204 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 255
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 256 CWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 62 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 137
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 138 ---ANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 194 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 245
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLE 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ ++ N NP +S
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA A++ Y T
Sbjct: 253 GRLPVKWMA-------------PEALFDRIY----------------------------T 271
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 272 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 323
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 324 MMMRDCWHAVPSQRPTFKQLVEDLDR 349
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 67 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 142
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 143 ---ANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 199 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 251 CWKERPEDRPTFDYLRSVLE 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 68 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 143
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 144 ---ANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 200 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 251
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 252 CWKERPEDRPTFDYLRSVLE 271
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ ++ N NP +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 212 GRLPVKWMAP-----------------------------------------EALFDRIYT 230
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 231 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 282
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 283 MMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ ++ N NP +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 212 GRLPVKWMAP-----------------------------------------EALFDRIYT 230
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 231 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 282
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 283 MMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 58 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HR+L A
Sbjct: 112 AQIAEGMAFIEERNYIHRNLRA-------------------------------------- 133
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 134 ---ANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 190 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 241
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 242 CWKERPEDRPTFDYLRSVLE 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV++ GVC + PI + E+ E G LS +L+ + + L+ M
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMC 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM YLE ++HRDLAARN
Sbjct: 113 LDVCEGMAYLEEACVIHRDLAARN------------------------------------ 136
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
C+VG+N IK+SD M D Y S T + P++W + E + ++KSDV
Sbjct: 137 -----CLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF V +WE+ + PY +N +V+E+ S + + Y PR A+ ++ +M
Sbjct: 191 WSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-----RLYKPRLASTH--VYQIMNH 242
Query: 241 CWKTNETDRPRFSEI 255
CW+ DRP FS +
Sbjct: 243 CWRERPEDRPAFSRL 257
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ ++ N NP +S
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 204 GRLPVKWMAP-----------------------------------------EALFDRIYT 222
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 223 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 274
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 275 MMMRDCWHAVPSQRPTFKQLVEDLDR 300
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ ++ N NP +S
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 205 GRLPVKWMAP-----------------------------------------EALFDRIYT 223
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 224 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 275
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 276 MMMRDCWHAVPSQRPTFKQLVEDLDR 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI-------HNCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ ++ N NP +S
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 201 GRLPVKWMAP-----------------------------------------EALFDRIYT 219
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 220 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 271
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 272 MMMRDCWHAVPSQRPTFKQLVEDLDR 297
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 115/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDLAA N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQ------IHNC-NSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ + C N NP +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 212 GRLPVKWMAP-----------------------------------------EALFDRIYT 230
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 231 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 282
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 283 MMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQ------IHNC-NSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ + C N NP +S
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + DYY T
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 197 GRLPVKWMAP-----------------------------------------EALFDRIYT 215
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 216 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 267
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 268 MMMRDCWHAVPSQRPTFKQLVEDLDR 293
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L P++V++IG+ E+P I E +G+L +L+ N NS + L+ +
Sbjct: 79 MKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE-RNKNS-----LKVLTLVLYS 131
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI M YLES + VHRD+A RN +V +K+ D + S Y D
Sbjct: 132 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL--SRYIED------------ 177
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
DYY + RLPI+WM+ ES+ + TT SDV
Sbjct: 178 ---------------------------EDYYKASV-TRLPIKWMSPESINFRRFTTASDV 209
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W FAV +WEIL Q P+ L N+ VI K LP+P C ++ LM
Sbjct: 210 WMFAVCMWEILSFGKQ-PFFWLENKDVIGVL-------EKGDRLPKPDLCPPVLYTLMTR 261
Query: 241 CWKTNETDRPRFSEI 255
CW + +DRPRF+E+
Sbjct: 262 CWDYDPSDRPRFTEL 276
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 68/273 (24%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC------------ 55
N+V ++G C+ P+ I EYC +GDL FL+ + P+++ G
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 56 -----LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYY 110
L+ ++Q+A GM +L S++ +HRD+AARN ++ + KI D +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---------- 204
Query: 111 LSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLL 170
AR + M NY +K ARLP++WMA ES+
Sbjct: 205 -----AR-------DIMNDSNYIVK-------------------GNARLPVKWMAPESIF 233
Query: 171 LGKNTTKSDVWSFAVTLWEILIHCNQRPYAE-LTNEQVIENCSHWYQNNSKQQYLPRPAT 229
T +SDVWS+ + LWEI PY L N + + YQ + +PA
Sbjct: 234 DCVYTVQSDVWSYGILLWEIF-SLGLNPYPGILVNSKFYKLVKDGYQ-------MAQPAF 285
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEIHLFLQRK 262
K I+ +M CW T RP F +I FLQ +
Sbjct: 286 APKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 318
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L P++V++IG+ E+P I E +G+L +L+ N NS + L+ +
Sbjct: 67 MKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE-RNKNS-----LKVLTLVLYS 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI M YLES + VHRD+A RN +V +K+ D + S Y D
Sbjct: 120 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL--SRYIED------------ 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
DYY + RLPI+WM+ ES+ + TT SDV
Sbjct: 166 ---------------------------EDYYKASV-TRLPIKWMSPESINFRRFTTASDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W FAV +WEIL Q P+ L N+ VI K LP+P C ++ LM
Sbjct: 198 WMFAVCMWEILSFGKQ-PFFWLENKDVIGVL-------EKGDRLPKPDLCPPVLYTLMTR 249
Query: 241 CWKTNETDRPRFSEI 255
CW + +DRPRF+E+
Sbjct: 250 CWDYDPSDRPRFTEL 264
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 57/255 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L P++V++IG+ E+P I E +G+L +L+ N NS + L+ +
Sbjct: 63 MKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE-RNKNS-----LKVLTLVLYS 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI M YLES + VHRD+A RN +V +K+ D + S Y D
Sbjct: 116 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL--SRYIED------------ 161
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
DYY + RLPI+WM+ ES+ + TT SDV
Sbjct: 162 ---------------------------EDYYKASV-TRLPIKWMSPESINFRRFTTASDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W FAV +WEIL Q P+ L N+ VI K LP+P C ++ LM
Sbjct: 194 WMFAVCMWEILSFGKQ-PFFWLENKDVIGVL-------EKGDRLPKPDLCPPVLYTLMTR 245
Query: 241 CWKTNETDRPRFSEI 255
CW + +DRPRF+E+
Sbjct: 246 CWDYDPSDRPRFTEL 260
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 71 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 146
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 147 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 203 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 254
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 255 CWKERPEDRPTFDYLRSVLE 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 70 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 145
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 146 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 202 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 253
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 254 CWKERPEDRPTFDYLRSVLE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 62 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 137
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 138 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 194 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 245
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 63 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 116
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 138
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 139 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 195 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 246
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 247 CWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 64 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 139
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 140 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 196 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 247
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 248 CWKERPEDRPTFDYLRSVLE 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 62 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 137
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 138 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 194 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 245
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLE 265
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 316 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-----LVDMA 369
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 428
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 429 KWTAP-----------------------------------------EAALYGRFTIKSDV 447
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 448 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 499
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 500 CWRKEPEERPTFEYLQAFLE 519
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 60 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-----LVDMA 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 114 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 172
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 173 KWTAP-----------------------------------------EAALYGRFTIKSDV 191
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 192 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 243
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 244 CWRKEPEERPTFEYLQAFLE 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 68 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 143
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + + A+ PI+W A E++ G T KSDV
Sbjct: 144 ---ANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 200 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 251
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 252 CWKERPEDRPTFDYLRSVLE 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 56 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 110 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 168
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 169 KWTAP-----------------------------------------EAALYGRFTIKSDV 187
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 188 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 239
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 240 CWRKDPEERPTFEYLQAFLE 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 127
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 175
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D+Y+ ++P W A ESL + SD
Sbjct: 176 ----------------------------DHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 208 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 260
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 261 CWAHKPEDRPTFVALRDFL 279
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 58 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 112 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 170
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 171 KWTAP-----------------------------------------EAALYGRFTIKSDV 189
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 190 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 241
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 242 CWRKDPEERPTFEYLQAFLE 261
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 233 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-----LVDMA 286
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 345
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 346 KWTAP-----------------------------------------EAALYGRFTIKSDV 364
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 365 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 416
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 417 CWRKEPEERPTFEYLQAFLE 436
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 233 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-----LVDMA 286
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 345
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 346 KWTAP-----------------------------------------EAALYGRFTIKSDV 364
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 365 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 416
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 417 CWRKEPEERPTFEYLQAFLE 436
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 233 MKKLRHEKLVQLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQ-----LVDMA 286
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 345
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 346 KWTAP-----------------------------------------EAALYGRFTIKSDV 364
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 365 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 416
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 417 CWRKEPEERPTFEYLQAFLE 436
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D+Y+ ++P W A ESL + SD
Sbjct: 166 ----------------------------DHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 198 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 250
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 251 CWAHKPEDRPTFVALRDFL 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D+Y+ ++P W A ESL + SD
Sbjct: 170 ----------------------------DHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 202 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 254
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 255 CWAHKPEDRPTFVALRDFL 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 115/260 (44%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LVR+ V T++PI I EY E G L FL+ + ++ L+ MA
Sbjct: 62 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMA 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRA-------------------------------------- 137
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + A+ PI+W A E++ G T KSDV
Sbjct: 138 ---ANILVSDTLSCKIADFGL-ARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ H + PY +TN +VI+N Y+ + RP C +E++ LM
Sbjct: 194 WSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRL 245
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK DRP F + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLE 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D+Y+ ++P W A ESL + SD
Sbjct: 166 ----------------------------DHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 198 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 250
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 251 CWAHKPEDRPTFVALRDFL 269
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D+Y+ ++P W A ESL + SD
Sbjct: 170 ----------------------------DHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 202 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 254
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 255 CWAHKPEDRPTFVALRDFL 273
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 56/259 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L+ LV++ V T++PI I E+ G L FL+ + Q P LI +
Sbjct: 64 MKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK-----LIDFS 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRA-------------------------------------- 139
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 140 ---ANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ + + PY ++N +VI Y+ +PRP C +E++++M+
Sbjct: 196 WSFGILLMEIVTY-GRIPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMR 247
Query: 241 CWKTNETDRPRFSEIHLFL 259
CWK +RP F I L
Sbjct: 248 CWKNRPEERPTFEYIQSVL 266
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 114/259 (44%), Gaps = 55/259 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L+ LVR+ V + E+PI I EY G L FL+ S E + LI +
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK-----SDEGGKVLLPKLIDFS 116
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM Y+E ++ +HRDL A
Sbjct: 117 AQIAEGMAYIERKNYIHRDLRA-------------------------------------- 138
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V ++ KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 139 ---ANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L+EI+ + + PY TN V+ S Y+ +PR C E++D+M
Sbjct: 195 WSFGILLYEIVTY-GKIPYPGRTNADVMTALSQGYR-------MPRVENCPDELYDIMKM 246
Query: 241 CWKTNETDRPRFSEIHLFL 259
CWK +RP F + L
Sbjct: 247 CWKEKAEERPTFDYLQSVL 265
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 234 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 287
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 288 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-GRLIEDNEYTARQGAKFPI 346
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 347 KWTAP-----------------------------------------EAALYGRFTIKSDV 365
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 366 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 417
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 418 CWRKDPEERPTFEYLQAFLE 437
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M ++ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKIRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 56/259 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L+ LV++ V T++PI I E+ G L FL+ + Q P LI +
Sbjct: 237 MKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK-----LIDFS 290
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRA-------------------------------------- 312
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V + KI+D + E + Y + A+ PI+W A E++ G T KSDV
Sbjct: 313 ---ANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ + + PY ++N +VI Y+ +PRP C +E++++M+
Sbjct: 369 WSFGILLMEIVTY-GRIPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMR 420
Query: 241 CWKTNETDRPRFSEIHLFL 259
CWK +RP F I L
Sbjct: 421 CWKNRPEERPTFEYIQSVL 439
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 424 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 475
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 536 VKWYAPECI---------------------NYY---------------------KFSSKS 553
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 554 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 605
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 606 NLCWTYDVENRPGFAAVELRLR 627
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ M+
Sbjct: 64 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ-----LVDMS 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 177 KWTAP-----------------------------------------EAALYGRFTIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 196 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 247
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 248 CWRKEPEERPTFEYLQAFLE 267
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 425 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 476
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 537 VKWYAPECI---------------------NYY---------------------KFSSKS 554
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 555 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 606
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 607 NLCWTYDVENRPGFAAVELRLR 628
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 219 GRLPVKWMAP-----------------------------------------EALFDRVYT 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA A++ Y T
Sbjct: 265 GRLPVKWMA-------------PEALFDRVY----------------------------T 283
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 284 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 335
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 336 MMMRDCWHAVPSQRPTFKQLVEDLDR 361
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 219 GRLPVKWMAP-----------------------------------------EALFDRVYT 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 219 GRLPVKWMAP-----------------------------------------EALFDRVYT 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 208 GRLPVKWMAP-----------------------------------------EALFDRVYT 226
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 227 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 278
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 279 MMMRDCWHAVPSQRPTFKQLVEDLDR 304
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + Y + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 127
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 175
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
DH + H ++P W A ESL + SD
Sbjct: 176 -----------------DHXVMQEHR-----------KVPFAWCAPESLKTRTFSHASDT 207
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 208 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 260
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 261 CWAHKPEDRPTFVALRDFL 279
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 211 GRLPVKWMAP-----------------------------------------EALFDRVYT 229
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 230 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 281
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 282 MMMRDCWHAVPSQRPTFKQLVEDLDR 307
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 72 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 184 VKWYAPECI---------------------NYY---------------------KFSSKS 201
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 202 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 253
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 254 NLCWTYDVENRPGFAAVELRLR 275
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 66 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 178 VKWYAPECI---------------------NYY---------------------KFSSKS 195
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 196 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 247
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 248 NLCWTYDVENRPGFAAVELRLR 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 219 GRLPVKWMAP-----------------------------------------EALFDRVYT 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 60 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 172 VKWYAPECI---------------------NYY---------------------KFSSKS 189
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 190 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 241
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 242 NLCWTYDVENRPGFAAVELRLR 263
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 62 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 174 VKWYAPECI---------------------NYY---------------------KFSSKS 191
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 192 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 243
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 244 NLCWTYDVENRPGFAAVELRLR 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL NL+R+ GV T P+ + E G L L+ H + G L A
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A GM YLES+ +HRDLAARN ++ +KI D + + ++D
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------ 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
DH + H ++P W A ESL + SD
Sbjct: 166 -----------------DHXVMQEHR-----------KVPFAWCAPESLKTRTFSHASDT 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W F VTLWE+ + Q P+ L Q++ ++ + + + LPRP C ++I+++M++
Sbjct: 198 WMFGVTLWEMFTY-GQEPWIGLNGSQIL------HKIDKEGERLPRPEDCPQDIYNVMVQ 250
Query: 241 CWKTNETDRPRFSEIHLFL 259
CW DRP F + FL
Sbjct: 251 CWAHKPEDRPTFVALRDFL 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 130
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 170
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 171 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 209
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 210 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 261
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 262 CWMIDADSRPKFREL 276
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 77 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 129
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 130 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 170 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 208
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 209 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 260
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 261 CWMIDADSRPKFREL 275
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 105 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 157
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 158 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 197
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 198 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 236
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 237 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 288
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 289 CWMIDADSRPKFREL 303
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 80 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 131
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 192 VKWYAPECI---------------------NYY---------------------KFSSKS 209
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 210 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 261
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 262 NLCWTYDVENRPGFAAVELRLR 283
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 130
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 170
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 171 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 209
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 210 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 261
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 262 CWMIDADSRPKFREL 276
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M LK LV++ V S E+PI + EY G L FL+ E A+ L+ MA
Sbjct: 58 MKKLKHDKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLK-----DGEGRALKLPNLVDMA 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q+A+GM Y+E + +HRDL +
Sbjct: 112 AQVAAGMAYIERMNYIHRDLRS-------------------------------------- 133
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +VG KI+D + E + + A+ PI+W A E+ L G+ T KSDV
Sbjct: 134 ---ANILVGNGLICKIADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E L+ + PY + N +V+E Y+ +P P C + +LM+
Sbjct: 190 WSFGILLTE-LVTKGRVPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMIH 241
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CWK + +RP F + FL+
Sbjct: 242 CWKKDPEERPTFEYLQSFLE 261
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 126
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 166
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 167 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 205
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 206 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 257
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 258 CWMIDADSRPKFREL 272
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 112/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 57 MKKLRHEKLVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQ-----LVDMA 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + + A+ PI
Sbjct: 111 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPI 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 170 KWTAP-----------------------------------------EAALYGRFTIKSDV 188
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 189 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 240
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 241 CWRKEPEERPTFEYLQAFLE 260
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 126
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 166
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 167 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 205
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 206 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 257
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 258 CWMIDADSRPKFREL 272
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 68 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 121 VQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 160
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 161 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 199
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 200 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 251
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 252 CWMIDADSRPKFREL 266
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 65 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 157
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 158 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 196
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 197 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 248
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 249 CWMIDADSRPKFREL 263
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 125
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 166 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 204
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 205 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 256
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 257 CWMIDADSRPKFREL 271
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 163
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 164 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 202
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 203 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 254
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 255 CWMIDADSRPKFREL 269
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 163
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 164 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 202
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 203 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 254
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 255 CWMIDADSRPKFREL 269
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N ++I+D + DYY T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 219 GRLPVKWMAP-----------------------------------------EALFDRVYT 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 96 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 148
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D +
Sbjct: 149 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------- 188
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 189 -------------------AKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 227
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 228 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 279
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 280 CWMIDADSRPKFREL 294
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 82 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 133
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 194 VKWYAPECI---------------------NYY---------------------KFSSKS 211
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 212 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 263
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 264 NLCWTYDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 82 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 133
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + +YY + T + P
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 194 VKWYAPECI---------------------NYY---------------------KFSSKS 211
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 212 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 263
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 264 NLCWTYDVENRPGFAAVELRLR 285
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 130
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG--------------------- 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 170 ------------------RAKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 209
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 210 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 261
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 262 CWMIDADSRPKFREL 276
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ M+
Sbjct: 64 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ-----LVDMS 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + + + A+ PI
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEWTARQGAKFPI 176
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 177 KWTAP-----------------------------------------EAALYGRFTIKSDV 195
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 196 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 247
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ +RP F + FL+
Sbjct: 248 CWRKEPEERPTFEYLQAFLE 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 114/259 (44%), Gaps = 55/259 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L+ LVR+ V + E+PI I E+ G L FL+ S E + LI +
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK-----SDEGGKVLLPKLIDFS 115
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM Y+E ++ +HRDL A
Sbjct: 116 AQIAEGMAYIERKNYIHRDLRA-------------------------------------- 137
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
AN +V ++ KI+D + E + Y + A+ PI+W A E++ G T KS+V
Sbjct: 138 ---ANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L+EI+ + + PY TN V+ S Y+ +PR C E++D+M
Sbjct: 194 WSFGILLYEIVTY-GKIPYPGRTNADVMSALSQGYR-------MPRMENCPDELYDIMKM 245
Query: 241 CWKTNETDRPRFSEIHLFL 259
CWK +RP F + L
Sbjct: 246 CWKEKAEERPTFDYLQSVL 264
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIH-------NCNSQENPA--ISYGC 55
K N++ ++G C+ + P+ I EY G+L +LQ + N NP +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ A Q+A GM+YL S+ +HRDLAARN +V ++ +KI+D + + D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA A++ Y T
Sbjct: 212 GRLPVKWMAP-------------EALFDRIY----------------------------T 230
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + E++ + ++ + +P+ C E++
Sbjct: 231 HQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELY 282
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 283 MMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG--------------------- 162
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A E +Y+ K +PI+WMA ES+L T +SDV
Sbjct: 163 ------------------RAKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 202
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M++
Sbjct: 203 WSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIMVK 254
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 255 CWMIDADSRPKFREL 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDL ARN +V +N +KI+D + DYY T
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 206 GRLPVKWMAP-----------------------------------------EALFDRVYT 224
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 225 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 276
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 277 MMMRDCWHAVPSQRPTFKQLVEDLDR 302
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P LV+ GVCS E PI + EY G L +L+ H + + L+ M
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ------LLEMC 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+ GM +LES +HRDLAARNC+V ++ +K+SD M + D Y+S + P+
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGM-TRYVLDDQYVSSVGTKFPV 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E +Y K ++KSDV
Sbjct: 170 KWSAP---------------------EVFHYF--------------------KYSSKSDV 188
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
W+F + +WE+ + PY TN +V+ S ++ L RP I+ +M
Sbjct: 189 WAFGILMWEVF-SLGKMPYDLYTNSEVVLKVSQGHR-------LYRPHLASDTIYQIMYS 240
Query: 241 CWKTNETDRPRFSEI 255
CW RP F ++
Sbjct: 241 CWHELPEKRPTFQQL 255
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I Y G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA E+L T
Sbjct: 219 GRLPVKWMAP-----------------------------------------EALFDRVYT 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 66/259 (25%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L+ LV++ V T++PI I E+ G L FL+ + Q P LI +
Sbjct: 231 MKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK-----LIDFS 284
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM ++E R+ +HRDL A N +V + KI+
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIA------------------------ 320
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D+ L+ A+ PI+W A E++ G T KSDV
Sbjct: 321 ----------------------------DFGLARVGAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L EI+ + + PY ++N +VI Y+ +PRP C +E++++M+
Sbjct: 353 WSFGILLMEIVTY-GRIPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMR 404
Query: 241 CWKTNETDRPRFSEIHLFL 259
CWK +RP F I L
Sbjct: 405 CWKNRPEERPTFEYIQSVL 423
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 113/260 (43%), Gaps = 56/260 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ LV++ V S E+PI + EY G L FL+ P L+ MA
Sbjct: 67 MKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMA 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIASGM Y+E + VHRDL A N +VG+N K++D + E + + A+ PI
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPI 179
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+W A E+ L G+ T KSDV
Sbjct: 180 KWTAP-----------------------------------------EAALYGRFTIKSDV 198
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WSF + L E+ + PY + N +V++ Y+ +P P C + + DLM +
Sbjct: 199 WSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQ 250
Query: 241 CWKTNETDRPRFSEIHLFLQ 260
CW+ + +RP F + FL+
Sbjct: 251 CWRKDPEERPTFEYLQAFLE 270
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I Y G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + DYY T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA A++ Y T
Sbjct: 219 GRLPVKWMAP-------------EALFDRVY----------------------------T 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 58/255 (22%)
Query: 1 MCSLKDPNLVRVIGV-CSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M L PN++ +IG+ E + Y GDL F++ + Q NP + LI
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR----SPQRNPTVK--DLISF 129
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
Q+A GM+YL + VHRDLAARN
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARN----------------------------------- 154
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYY--LSDTKARLPIRWMAWESLLLGKNTTK 177
CM+ +++T+K++D + + +YY ARLP++W A ESL + TTK
Sbjct: 155 ------CMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK 208
Query: 178 SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDL 237
SDVWSF V LWE+L PY + + +H+ + LP+P C ++ +
Sbjct: 209 SDVWSFGVLLWELLTR-GAPPYRHIDP----FDLTHFLAQGRR---LPQPEYCPDSLYQV 260
Query: 238 MLECWKTNETDRPRF 252
M +CW+ + RP F
Sbjct: 261 MQQCWEADPAVRPTF 275
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 60/262 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IG+C E + + E E G L+ +LQ +N + +I +
Sbjct: 66 MQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ-------QNRHVKDKNIIELV 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS-HYESDYYLSDTKARLP 119
Q++ GMKYLE + VHRDLAARN ++ + KISD + + + + Y + T + P
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 120 IRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
++W A C+ +YY K ++KS
Sbjct: 178 VKWYAPECI---------------------NYY---------------------KFSSKS 195
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWSF V +WE + Q+PY + +V K + + PA C +E++DLM
Sbjct: 196 DVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-------EKGERMGCPAGCPREMYDLM 247
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW + +RP F+ + L L+
Sbjct: 248 NLCWTYDVENRPGFAAVELRLR 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ P+LVR++GVC + I + + G L ++ H N I L+
Sbjct: 94 MASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN------IGSQLLLNWC 146
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D + + + ++PI
Sbjct: 147 VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 206
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+WM A+ C HY K T +SDV
Sbjct: 207 KWM----------------ALECIHYR-------------------------KFTHQSDV 225
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE++ +PY + ++ + K + LP+P C +++ +M++
Sbjct: 226 WSYGVTIWELMTFGG-KPYDGIPTREIPDLL-------EKGERLPQPPICTIDVYMVMVK 277
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 278 CWMIDADSRPKFKEL 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 66/260 (25%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---------- 56
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKDLYKDFLTLEHL 146
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
I + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+ A
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 117 RLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA + + YTI
Sbjct: 207 RLPLKWMAPETIFDRVYTI----------------------------------------- 225
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + ++ E + ++ + P E++
Sbjct: 226 -QSDVWSFGVLLWEIF-SLGASPYPGV---KIDEEFXRRLKEGTRMR---APDYTTPEMY 277
Query: 236 DLMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 278 QTMLDCWHGEPSQRPTFSEL 297
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ P+LVR++GVC + I + + G L ++ H N I L+
Sbjct: 71 MASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN------IGSQLLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE R +VHRDLAARN +V +KI+D + + + ++PI
Sbjct: 124 VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 183
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+WM A+ C HY K T +SDV
Sbjct: 184 KWM----------------ALECIHYR-------------------------KFTHQSDV 202
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE++ +PY + ++ + K + LP+P C +++ +M++
Sbjct: 203 WSYGVTIWELMTFGG-KPYDGIPTREIPDLL-------EKGERLPQPPICTIDVYMVMVK 254
Query: 241 CWKTNETDRPRFSEI 255
CW + RP+F E+
Sbjct: 255 CWMIDADSRPKFKEL 269
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 66/260 (25%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCL---------- 56
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKDLYKDFLTLEHL 146
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
I + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+ A
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 117 RLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA + + YTI
Sbjct: 207 RLPLKWMAPETIFDRVYTI----------------------------------------- 225
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + ++ E C + + P E++
Sbjct: 226 -QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPEMY 277
Query: 236 DLMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 278 QTMLDCWHGEPSQRPTFSEL 297
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA A++ Y T
Sbjct: 219 GRLPVKWMAP-------------EALFDRVY----------------------------T 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 58/266 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI---------HNCNSQENPAISYGC 55
K N++ ++G C+ + P+ I EY G+L +L+ ++ N +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
L+ Q+A GM+YL S+ +HRDLAARN +V +N +KI+D + D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
RLP++WMA A++ Y T
Sbjct: 219 GRLPVKWMAP-------------EALFDRVY----------------------------T 237
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V +WEI PY + E++ + ++ + +PA C E++
Sbjct: 238 HQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELY 289
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+M +CW + RP F ++ L R
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 137
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 220
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 221 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 268
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 269 PEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 154 QYLEENHFIHRDIAAR-----------------------------------------NCL 172
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 233 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 284
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 285 QPEDRPNFAII 295
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDN------IGSQYLLNWC 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 182
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 183 PIKW-----------------------------------------MALESILHRIYTHQS 201
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 202 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 253
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 254 VKCWMIDADSRPKFREL 270
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 183
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 266
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 267 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 314
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 315 PEMYQTMLDCWHGEPSQRPTFSEL 338
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 169 QYLEENHFIHRDIAAR-----------------------------------------NCL 187
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 248 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 299
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 300 QPEDRPNFAII 310
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 109/268 (40%), Gaps = 64/268 (23%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENP----------------AI 51
N+V ++G C+ PI I EYC +GDL +L+ E+ +
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 52 SYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYL 111
++ L+ A Q+A GM++LE + VHRDLAARN +V +KI D + Y+
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 112 SDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA ESL
Sbjct: 230 VRGNARLPVKWMAP-----------------------------------------ESLFE 248
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
G T KSDVWS+ + LWEI PY + V N QN K + +P
Sbjct: 249 GIYTIKSDVWSYGILLWEIF-SLGVNPYPGIP---VDANFYKLIQNGFK---MDQPFYAT 301
Query: 232 KEIFDLMLECWKTNETDRPRFSEIHLFL 259
+EI+ +M CW + RP F + FL
Sbjct: 302 EEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDN------IGSQYLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 181
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 182 PIKW-----------------------------------------MALESILHRIYTHQS 200
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 201 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 252
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 253 VKCWMIDADSRPKFREL 269
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 68 KYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
+YLE +HRD+AARNC++ G KI D M Y + YY A LP++WM
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
E+ + G T+K+D WSF
Sbjct: 215 P-----------------------------------------EAFMEGIFTSKTDTWSFG 233
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 234 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 285
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 286 QPEDRPNFAII 296
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 68 KYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
+YLE +HRD+AARNC++ G KI D M Y + YY A LP++WM
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
E+ + G T+K+D WSF
Sbjct: 229 P-----------------------------------------EAFMEGIFTSKTDTWSFG 247
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 248 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 299
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 300 QPEDRPNFAII 310
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 137
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 220
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 221 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 268
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 269 PEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ SL ++VR++G+C P S++Q ++ L + L + Q A+ L+
Sbjct: 69 IGSLDHAHIVRLLGLC----PGSSLQLVTQYLPLGSLL---DHVRQHRGALGPQLLLNWG 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE +VHR+LAARN ++ ++++D + +D D
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV------ADLLPPD------- 168
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D L ++A+ PI+WMA ES+ GK T +SDV
Sbjct: 169 ----------------------------DKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 200
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ PYA L +V + K + L +P C +++ +M++
Sbjct: 201 WSYGVTVWE-LMTFGAEPYAGLRLAEVPDLL-------EKGERLAQPQICTIDVYMVMVK 252
Query: 241 CWKTNETDRPRFSEI 255
CW +E RP F E+
Sbjct: 253 CWMIDENIRPTFKEL 267
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 155 QYLEENHFIHRDIAAR-----------------------------------------NCL 173
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 174 LTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 234 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 285
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 286 QPEDRPNFAII 296
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 169 QYLEENHFIHRDIAAR-----------------------------------------NCL 187
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 248 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 299
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 300 QPEDRPNFAII 310
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 146 QYLEENHFIHRDIAAR-----------------------------------------NCL 164
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 165 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 224
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 225 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 276
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 277 QPEDRPNFAII 287
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 161 QYLEENHFIHRDIAAR-----------------------------------------NCL 179
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 180 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 239
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 240 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 291
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 292 QPEDRPNFAII 302
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 195 QYLEENHFIHRDIAAR-----------------------------------------NCL 213
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 273
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 274 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 325
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 326 QPEDRPNFAII 336
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 171 QYLEENHFIHRDIAAR-----------------------------------------NCL 189
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 190 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 249
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 250 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 301
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 302 QPEDRPNFAII 312
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 155 QYLEENHFIHRDIAAR-----------------------------------------NCL 173
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 234 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 285
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 286 QPEDRPNFAII 296
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 181 QYLEENHFIHRDIAAR-----------------------------------------NCL 199
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 200 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 259
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 260 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 311
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 312 QPEDRPNFAII 322
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 172 QYLEENHFIHRDIAAR-----------------------------------------NCL 190
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 191 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 250
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 251 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 302
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 303 QPEDRPNFAII 313
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+VR IGV P + E GDL +FL+ + +++ L+ +A IA G
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+YLE +HRD+AAR NC+
Sbjct: 154 QYLEENHFIHRDIAAR-----------------------------------------NCL 172
Query: 128 V---GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G KI D M Y + YY A LP++WM E+ + G T+K+D WSF
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
V LWEI PY +N++V+E + + + P C ++ +M +CW+
Sbjct: 233 VLLWEIF-SLGYMPYPSKSNQEVLEFVTSGGRMDP-------PKNCPGPVYRIMTQCWQH 284
Query: 245 NETDRPRFSEI 255
DRP F+ I
Sbjct: 285 QPEDRPNFAII 295
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 146
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 229
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 230 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 277
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 56/255 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ SL ++VR++G+C P S++Q ++ L + L + Q A+ L+
Sbjct: 87 IGSLDHAHIVRLLGLC----PGSSLQLVTQYLPLGSLL---DHVRQHRGALGPQLLLNWG 139
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QIA GM YLE +VHR+LAARN ++ ++++D + +D D
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV------ADLLPPD------- 186
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
D L ++A+ PI+WMA ES+ GK T +SDV
Sbjct: 187 ----------------------------DKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 218
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L+ PYA L +V + K + L +P C +++ +M++
Sbjct: 219 WSYGVTVWE-LMTFGAEPYAGLRLAEVPDLL-------EKGERLAQPQICTIDVYMVMVK 270
Query: 241 CWKTNETDRPRFSEI 255
CW +E RP F E+
Sbjct: 271 CWMIDENIRPTFKEL 285
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 125
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD--HAMYCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D A E +Y+ K +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK--V 183
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 184 PIKW-----------------------------------------MALESILHRIYTHQS 202
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 203 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 254
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 255 VKCWMIDADSRPKFREL 271
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 127
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD--HAMYCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D A E +Y+ K +
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK--V 185
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 186 PIKW-----------------------------------------MALESILHRIYTHQS 204
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 205 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 256
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 257 VKCWMIDADSRPKFREL 273
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 130
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 188
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 189 PIKW-----------------------------------------MALESILHRIYTHQS 207
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 208 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 259
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 260 VKCWMIDADSRPKFREL 276
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 127
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 185
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 186 PIKW-----------------------------------------MALESILHRIYTHQS 204
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 205 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 256
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 257 VKCWMIDADSRPKFREL 273
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 125
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 183
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 184 PIKW-----------------------------------------MALESILHRIYTHQS 202
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 203 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 254
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 255 VKCWMIDADSRPKFREL 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 126
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 184
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 185 PIKW-----------------------------------------MALESILHRIYTHQS 203
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 204 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 255
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 256 VKCWMIDADSRPKFREL 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 182
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 183 PIKW-----------------------------------------MALESILHRIYTHQS 201
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 202 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 253
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 254 VKCWMIDADSRPKFREL 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 181
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 182 PIKW-----------------------------------------MALESILHRIYTHQS 200
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 201 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 252
Query: 239 LECWKTNETDRPRFSEI 255
++CW + RP+F E+
Sbjct: 253 VKCWMIDADSRPKFREL 269
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 60/259 (23%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHN---CNSQENPAISYGC------LI 57
N+V ++G C+ P+ I E+C+FG+LST+L+ +E P Y LI
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKAR 117
+ Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ Y+ AR
Sbjct: 154 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 118 LPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT 176
LP++WMA + + YTI
Sbjct: 214 LPLKWMAPETIFDRVYTI------------------------------------------ 231
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFD 236
+SDVWSF V LWEI PY + ++ E C + + P E++
Sbjct: 232 QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPEMYQ 284
Query: 237 LMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 285 TMLDCWHGEPSQRPTFSEL 303
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN------IGSQYLLNWC 125
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD--HAMYCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D A E +Y+ K +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK--V 183
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 184 PIKW-----------------------------------------MALESILHRIYTHQS 202
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 203 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 254
Query: 239 LECWKTNETDRPRFSEI 255
+CW + RP+F E+
Sbjct: 255 RKCWMIDADSRPKFREL 271
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 125
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD--HAMYCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D A E +Y+ K +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK--V 183
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 184 PIKW-----------------------------------------MALESILHRIYTHQS 202
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 203 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 254
Query: 239 LECWKTNETDRPRFSEI 255
+CW + RP+F E+
Sbjct: 255 RKCWMIDADSRPKFREL 271
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI--HNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 124
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 125 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 150
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D Y S ++ P+RW E L+ K ++KS
Sbjct: 151 -------CLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 203 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 254
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 255 YSCWHEKADERPTF 268
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI--HNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 104
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 105 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 130
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D Y S ++ P+RW E L+ K ++KS
Sbjct: 131 -------CLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 183 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 234
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 235 YSCWHEKADERPTF 248
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI--HNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 115
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 116 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 141
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D Y S ++ P+RW E L+ K ++KS
Sbjct: 142 -------CLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 194 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 245
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 246 YSCWHEKADERPTF 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI--HNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 109
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 110 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 135
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D Y S ++ P+RW E L+ K ++KS
Sbjct: 136 -------CLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 188 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 239
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 240 YSCWHEKADERPTF 253
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 81 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 133
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 134 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 191
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 192 PIKW-----------------------------------------MALESILHRIYTHQS 210
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 211 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 262
Query: 239 LECWKTNETDRPRFSEI 255
+CW + RP+F E+
Sbjct: 263 RKCWMIDADSRPKFREL 279
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 126
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 184
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 185 PIKW-----------------------------------------MALESILHRIYTHQS 203
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 204 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 255
Query: 239 LECWKTNETDRPRFSEI 255
+CW + RP+F E+
Sbjct: 256 RKCWMIDADSRPKFREL 272
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 60/257 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M S+ +P++ R++G+C T + I + FG L +++ H N I L+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQYLLNWC 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM--YCSHYESDYYLSDTKARL 118
QIA GM YLE R +VHRDLAARN +V +KI+D + E +Y+ K +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--V 181
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
PI+W MA ES+L T +S
Sbjct: 182 PIKW-----------------------------------------MALESILHRIYTHQS 200
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DVWS+ VT+WE L+ +PY + ++ K + LP+P C +++ +M
Sbjct: 201 DVWSYGVTVWE-LMTFGSKPYDGIPASEISSIL-------EKGERLPQPPICTIDVYMIM 252
Query: 239 LECWKTNETDRPRFSEI 255
+CW + RP+F E+
Sbjct: 253 RKCWMIDADSRPKFREL 269
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI--HNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 108
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 109 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 134
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D Y S ++ P+RW E L+ K ++KS
Sbjct: 135 -------CLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 187 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 238
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 239 YSCWHEKADERPTF 252
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 104/240 (43%), Gaps = 52/240 (21%)
Query: 22 ISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLA 81
+ + EY G L FLQ H + L+ ++QI GM+YL SR VHRDLA
Sbjct: 88 LRLVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 141
Query: 82 ARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAM 141
ARN +V +KI+D + LP+
Sbjct: 142 ARNILVESEAHVKIADFGL--------------AKLLPL--------------------- 166
Query: 142 YCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQ--RPY 199
+ DYY+ + PI W A ESL + +SDVWSF V L+E+ +C++ P
Sbjct: 167 -----DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 221
Query: 200 AE----LTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEI 255
AE + +E+ + S + + Q LP P C E+ +LM CW + DRP FS +
Sbjct: 222 AEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQ--IHNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 109
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 110 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 135
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D Y S ++ P+RW E L+ K ++KS
Sbjct: 136 -------CLVNDQGVVKVSDFGL-SRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 188 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 239
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 240 YSCWHEKADERPTF 253
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 114/269 (42%), Gaps = 61/269 (22%)
Query: 1 MCSLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIF 58
+ SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQ 119
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+QI GM+YL ++ +HR+LA RN +V +KI D + TK L
Sbjct: 120 YTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGL-------------TKV-L 165
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
P + +YY PI W A ESL K + S
Sbjct: 166 P--------------------------QDKEYYKVKEPGESPIFWYAPESLTESKFSVAS 199
Query: 179 DVWSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPA 228
DVWSF V L+E+ I ++ P AE + ++ + +NN + LPRP
Sbjct: 200 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPD 256
Query: 229 TCQKEIFDLMLECWKTNETDRPRFSEIHL 257
C EI+ +M ECW N RP F ++ L
Sbjct: 257 GCPDEIYMIMTECWNNNVNQRPSFRDLAL 285
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 146
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + Y+ +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 229
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 230 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 277
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 64/259 (24%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNC---NSQENPA-ISYGCL 56
M + P + R++G+C T ST+Q L T L + C + +EN + L
Sbjct: 73 MAGVGSPYVSRLLGICLT----STVQ-------LVTQLMPYGCLLDHVRENRGRLGSQDL 121
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
+ QIA GM YLE +VHRDLAARN +V +KI+D + A
Sbjct: 122 LNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGL---------------A 166
Query: 117 RLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT 176
RL + I + + Y +D ++PI+WMA ES+L + T
Sbjct: 167 RL---------------LDIDE-----TEYHAD------GGKVPIKWMALESILRRRFTH 200
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFD 236
+SDVWS+ VT+WE++ +PY + ++ + K + LP+P C +++
Sbjct: 201 QSDVWSYGVTVWELMTF-GAKPYDGIPAREIPDLL-------EKGERLPQPPICTIDVYM 252
Query: 237 LMLECWKTNETDRPRFSEI 255
+M++CW + RPRF E+
Sbjct: 253 IMVKCWMIDSECRPRFREL 271
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 102/240 (42%), Gaps = 52/240 (21%)
Query: 22 ISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLA 81
+ + EY G L FLQ H + L+ ++QI GM+YL SR VHRDLA
Sbjct: 101 LRLVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 154
Query: 82 ARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAM 141
ARN +V +KI+D + LP+
Sbjct: 155 ARNILVESEAHVKIADFGL--------------AKLLPL--------------------- 179
Query: 142 YCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQ--RPY 199
+ DYY+ + PI W A ESL + +SDVWSF V L+E+ +C++ P
Sbjct: 180 -----DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234
Query: 200 AELTN----EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEI 255
AE E+ + S + + Q LP P C E+ +LM CW + DRP FS +
Sbjct: 235 AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 55/252 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IGVC E + + E G L FL +E P + L+
Sbjct: 64 MHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLH-- 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q++ GMKYLE ++ VHRDLAARN ++ + KISD + +KA
Sbjct: 118 -QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL-------------SKA---- 159
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+G + YY + + + P++W A E + K +++SDV
Sbjct: 160 -------LGAD----------------DSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L + Q+PY ++ +V+ + + + P C E++ LM +
Sbjct: 197 WSYGVTMWEALSY-GQKPYKKMKGPEVMAFI-------EQGKRMECPPECPPELYALMSD 248
Query: 241 CWKTNETDRPRF 252
CW DRP F
Sbjct: 249 CWIYKWEDRPDF 260
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 113/267 (42%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ +++ PI W A ESL K + SDV
Sbjct: 166 -------------------------QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDV 200
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 201 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 257
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLAL 284
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 68/262 (25%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKPEDLYKDFLTLE 148
Query: 56 -LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT 114
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + + +
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 115 KARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGK 173
ARLP++WMA + + YTI
Sbjct: 209 DARLPLKWMAPETIFDRVYTI--------------------------------------- 229
Query: 174 NTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKE 233
+SDVWSF V LWEI PY + ++ E C + + P E
Sbjct: 230 ---QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 234 IFDLMLECWKTNETDRPRFSEI 255
++ ML+CW + RP FSE+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 137
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + + +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 220
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 221 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 268
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 269 PEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 60/254 (23%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQI--HNCNSQENPAISYGCLIF 58
M +L LV++ GVC+ + PI I EY G L +L+ H +Q+ L+
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ--------LLE 124
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M + M+YLES+ +HRDLAARN
Sbjct: 125 MCKDVCEAMEYLESKQFLHRDLAARN---------------------------------- 150
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
C+V +K+SD + + D S ++ P+RW E L+ K ++KS
Sbjct: 151 -------CLVNDQGVVKVSDFGL-SRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D+W+F V +WEI + PY TN + E+ + + L RP ++++ +M
Sbjct: 203 DIWAFGVLMWEIY-SLGKMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIM 254
Query: 239 LECWKTNETDRPRF 252
CW +RP F
Sbjct: 255 YSCWHEKADERPTF 268
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 101/240 (42%), Gaps = 52/240 (21%)
Query: 22 ISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLA 81
+ + EY G L FLQ H + L+ ++QI GM+YL SR VHRDLA
Sbjct: 89 LRLVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 142
Query: 82 ARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAM 141
ARN +V +KI+D + LP+
Sbjct: 143 ARNILVESEAHVKIADFGL--------------AKLLPL--------------------- 167
Query: 142 YCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQ--RPY 199
+ DYY+ + PI W A ESL + +SDVWSF V L+E+ +C++ P
Sbjct: 168 -----DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 222
Query: 200 AELTN----EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEI 255
AE E+ + + + Q LP P C E+ +LM CW + DRP FS +
Sbjct: 223 AEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 137
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + + +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 220
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 221 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 268
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 269 PEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 55/252 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L +P +VR+IGVC E + + E G L FL +E P + L+
Sbjct: 390 MHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLH-- 443
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q++ GMKYLE ++ VHR+LAARN ++ + KISD + +KA
Sbjct: 444 -QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGL-------------SKA---- 485
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+G + YY + + + P++W A E + K +++SDV
Sbjct: 486 -------LGAD----------------DSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 522
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ VT+WE L + Q+PY ++ +V+ + + + + P C E++ LM +
Sbjct: 523 WSYGVTMWEALSY-GQKPYKKMKGPEVMA----FIEQGKRMEC---PPECPPELYALMSD 574
Query: 241 CWKTNETDRPRF 252
CW DRP F
Sbjct: 575 CWIYKWEDRPDF 586
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 70/264 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKVAPEDLYKDFLT 146
Query: 56 ---LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLS 112
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + + +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 113 DTKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL 171
ARLP++WMA + + YTI
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTI------------------------------------- 229
Query: 172 GKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ 231
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 230 -----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTT 277
Query: 232 KEIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 69/263 (26%)
Query: 8 NLVRVIGVCSTED-PISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGC----------- 55
N+V ++G C+ P+ I E+C+FG+LST+L+ S+ N + Y
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-----SKRNEFVPYKTPEDLYKDFLTL 147
Query: 56 --LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSD 113
LI + Q+A GM++L SR +HRDLAARN ++ + +KI D + + +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 114 TKARLPIRWMA-NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLG 172
ARLP++WMA + + YTI
Sbjct: 208 GDARLPLKWMAPETIFDRVYTI-------------------------------------- 229
Query: 173 KNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQK 232
+SDVWSF V LWEI PY + ++ E C + + P
Sbjct: 230 ----QSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTP 278
Query: 233 EIFDLMLECWKTNETDRPRFSEI 255
E++ ML+CW + RP FSE+
Sbjct: 279 EMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 138
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 183
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 184 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 218
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 219 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 275
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 276 PDEIYMIMTECWNNNVNQRPSFRDLAL 302
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 138
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 183
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 184 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 218
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 219 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 275
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 276 PDEIYMIMTECWNNNVNQRPSFRDLAL 302
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 124
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 169
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 170 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 204
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 205 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 261
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 262 PDEIYMIMTECWNNNVNQRPSFRDLAL 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 151
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 196
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 197 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 231
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 232 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 288
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 289 PDEIYMIMTECWNNNVNQRPSFRDLAL 315
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 112/269 (41%), Gaps = 61/269 (22%)
Query: 1 MCSLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIF 58
+ SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQ 125
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+QI GM+YL ++ +HRDLA RN +V +KI D + TK L
Sbjct: 126 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-L 171
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
P + + PI W A ESL K + S
Sbjct: 172 P--------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 205
Query: 179 DVWSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPA 228
DVWSF V L+E+ I ++ P AE + ++ + +NN + LPRP
Sbjct: 206 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPD 262
Query: 229 TCQKEIFDLMLECWKTNETDRPRFSEIHL 257
C EI+ +M ECW N RP F ++ L
Sbjct: 263 GCPDEIYMIMTECWNNNVNQRPSFRDLAL 291
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 166 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 200
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 201 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 257
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLAL 284
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 112/269 (41%), Gaps = 61/269 (22%)
Query: 1 MCSLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIF 58
+ SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQ 123
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+QI GM+YL ++ +HRDLA RN +V +KI D + TK L
Sbjct: 124 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-L 169
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
P + + PI W A ESL K + S
Sbjct: 170 P--------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 203
Query: 179 DVWSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPA 228
DVWSF V L+E+ I ++ P AE + ++ + +NN + LPRP
Sbjct: 204 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPD 260
Query: 229 TCQKEIFDLMLECWKTNETDRPRFSEIHL 257
C EI+ +M ECW N RP F ++ L
Sbjct: 261 GCPDEIYMIMTECWNNNVNQRPSFRDLAL 289
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 126
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 171
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 172 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 206
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 207 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 263
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 264 PDEIYMIMTECWNNNVNQRPSFRDLAL 290
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 112/269 (41%), Gaps = 61/269 (22%)
Query: 1 MCSLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIF 58
+ SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQ 121
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+QI GM+YL ++ +HRDLA RN +V +KI D + TK L
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-L 167
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
P + + PI W A ESL K + S
Sbjct: 168 P--------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 201
Query: 179 DVWSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPA 228
DVWSF V L+E+ I ++ P AE + ++ + +NN + LPRP
Sbjct: 202 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPD 258
Query: 229 TCQKEIFDLMLECWKTNETDRPRFSEIHL 257
C EI+ +M ECW N RP F ++ L
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLAL 287
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 166 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 200
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 201 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 257
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLAL 284
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 164
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 165 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 199
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 200 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 256
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 257 PDEIYMIMTECWNNNVNQRPSFRDLAL 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYT 118
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 163
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 164 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 198
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 199 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 255
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 256 PDEIYMIMTECWNNNVNQRPSFRDLAL 282
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 3 SLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
SL+ N+V+ GVC + + I EY +G L +LQ H I + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHA------ERIDHIKLLQYT 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
+QI GM+YL ++ +HRDLA RN +V +KI D + TK LP
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-LP- 168
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
+ + PI W A ESL K + SDV
Sbjct: 169 -------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 203
Query: 181 WSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPATC 230
WSF V L+E+ I ++ P AE + ++ + +NN + LPRP C
Sbjct: 204 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGC 260
Query: 231 QKEIFDLMLECWKTNETDRPRFSEIHL 257
EI+ +M ECW N RP F ++ L
Sbjct: 261 PDEIYMIMTECWNNNVNQRPSFRDLAL 287
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 59/266 (22%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCN---SQENPAI--------SYGCL 56
N+V ++G C+ P I EYC +GDL FL+ + S+ +PAI L
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
+ + Q+A GM +L S++ +HRDLAARN ++ KI D + Y+ A
Sbjct: 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 117 RLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT 176
RLP++WMA ES+ T
Sbjct: 208 RLPVKWMAP-----------------------------------------ESIFNCVYTF 226
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFD 236
+SDVWS+ + LWE L PY + + S +Y+ + + P E++D
Sbjct: 227 ESDVWSYGIFLWE-LFSLGSSPYPGMPVD------SKFYKMIKEGFRMLSPEHAPAEMYD 279
Query: 237 LMLECWKTNETDRPRFSEIHLFLQRK 262
+M CW + RP F +I ++++
Sbjct: 280 IMKTCWDADPLKRPTFKQIVQLIEKQ 305
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 61/267 (22%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCN---SQENPAISYGCLIF------ 58
N+V ++G C+ P I EYC +GDL FL+ + S+ +PAI +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 59 --MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY-YLSDTK 115
+ Q+A GM +L S++ +HRDLAARN ++ KI D + H ++D Y+
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL-ARHIKNDSNYVVKGN 229
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
ARLP++WMA ES+ T
Sbjct: 230 ARLPVKWMAP-----------------------------------------ESIFNCVYT 248
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWS+ + LWE L PY + + S +Y+ + + P E++
Sbjct: 249 FESDVWSYGIFLWE-LFSLGSSPYPGMPVD------SKFYKMIKEGFRMLSPEHAPAEMY 301
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQRK 262
D+M CW + RP F +I ++++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 59/266 (22%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCN---SQENPAI--------SYGCL 56
N+V ++G C+ P I EYC +GDL FL+ + S+ +PAI L
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
+ + Q+A GM +L S++ +HRDLAARN ++ KI D + Y+ A
Sbjct: 164 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 117 RLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT 176
RLP++WMA ES+ T
Sbjct: 224 RLPVKWMAP-----------------------------------------ESIFNCVYTF 242
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFD 236
+SDVWS+ + LWE L PY + + S +Y+ + + P E++D
Sbjct: 243 ESDVWSYGIFLWE-LFSLGSSPYPGMPVD------SKFYKMIKEGFRMLSPEHAPAEMYD 295
Query: 237 LMLECWKTNETDRPRFSEIHLFLQRK 262
+M CW + RP F +I ++++
Sbjct: 296 IMKTCWDADPLKRPTFKQIVQLIEKQ 321
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCN---SQENPAISYGCLIF------ 58
N+V ++G C+ P I EYC +GDL FL+ + S+ +PAI +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 59 --MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
+ Q+A GM +L S++ +HRDLAARN ++ KI D + Y+ A
Sbjct: 166 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 117 RLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT 176
RLP++WMA ES+ T
Sbjct: 226 RLPVKWMAP-----------------------------------------ESIFNCVYTF 244
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFD 236
+SDVWS+ + LWE L PY + + S +Y+ + + P E++D
Sbjct: 245 ESDVWSYGIFLWE-LFSLGSSPYPGMPVD------SKFYKMIKEGFRMLSPEHAPAEMYD 297
Query: 237 LMLECWKTNETDRPRFSEIHLFLQRK 262
+M CW + RP F +I ++++
Sbjct: 298 IMKTCWDADPLKRPTFKQIVQLIEKQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCN---SQENPAISYGCLIF------ 58
N+V ++G C+ P I EYC +GDL FL+ + S+ +PAI +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 59 --MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA 116
+ Q+A GM +L S++ +HRDLAARN ++ KI D + Y+ A
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 117 RLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT 176
RLP++WMA ES+ T
Sbjct: 231 RLPVKWMAP-----------------------------------------ESIFNCVYTF 249
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFD 236
+SDVWS+ + LWE L PY + + S +Y+ + + P E++D
Sbjct: 250 ESDVWSYGIFLWE-LFSLGSSPYPGMPVD------SKFYKMIKEGFRMLSPEHAPAEMYD 302
Query: 237 LMLECWKTNETDRPRFSEIHLFLQRK 262
+M CW + RP F +I ++++
Sbjct: 303 IMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 112/269 (41%), Gaps = 61/269 (22%)
Query: 1 MCSLKDPNLVRVIGVC--STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIF 58
+ SL+ N+V+ GVC + + I E+ +G L +LQ H I + L+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK------ERIDHIKLLQ 121
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+QI GM+YL ++ +HRDLA RN +V +KI D + TK L
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL-------------TKV-L 167
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
P + + PI W A ESL K + S
Sbjct: 168 P--------------------------QDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 201
Query: 179 DVWSFAVTLWEIL--IHCNQRPYAEL--------TNEQVIENCSHWYQNNSKQQYLPRPA 228
DVWSF V L+E+ I ++ P AE + ++ + +NN + LPRP
Sbjct: 202 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPD 258
Query: 229 TCQKEIFDLMLECWKTNETDRPRFSEIHL 257
C EI+ +M ECW N RP F ++ L
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLAL 287
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 60/261 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTE-DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M L+ NLV+++GV E + + EY G L +L+ S+ + CL+
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKF 294
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
+ + M+YLE + VHRDLAARN +V ++ K+ SD+ L+ +
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV-----------SDFGLTKEASS-- 341
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
+ +LP++W A E+L K +TKSD
Sbjct: 342 ---------------------------------TQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
VWSF + LWEI + PY + + V+ Y+ ++ P C ++D+M
Sbjct: 369 VWSFGILLWEIY-SFGRVPYPRIPLKDVVPRVEKGYKMDA-------PDGCPPAVYDVMK 420
Query: 240 ECWKTNETDRPRFSEIHLFLQ 260
CW + RP F ++ L+
Sbjct: 421 NCWHLDAATRPTFLQLREQLE 441
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 99/240 (41%), Gaps = 52/240 (21%)
Query: 22 ISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLA 81
+ + EY G L FLQ H + L+ ++QI GM+YL SR VHRDLA
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 138
Query: 82 ARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAM 141
ARN +V +KI+D + LP+
Sbjct: 139 ARNILVESEAHVKIADFGL--------------AKLLPL--------------------- 163
Query: 142 YCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQ--RPY 199
+ D + + PI W A ESL + +SDVWSF V L+E+ +C++ P
Sbjct: 164 -----DKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 218
Query: 200 AELTN----EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEI 255
AE E+ + + + Q LP P C E+ +LM CW + DRP FS +
Sbjct: 219 AEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 50/245 (20%)
Query: 11 RVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYL 70
R+ V S+E S+ + E LS + + + I+ LI + Q+A GM++L
Sbjct: 158 RLDSVTSSESFASS--GFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFL 215
Query: 71 ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
SR +HRDLAARN ++ +
Sbjct: 216 SSRKCIHRDLAARNILLSE----------------------------------------- 234
Query: 131 NYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEI 190
N +KI D + Y++ Y+ RLP++WMA ES+ +TKSDVWS+ V LWEI
Sbjct: 235 NNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
Query: 191 LIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRP 250
PY + ++ + CS + + P EI+ +ML+CW + +RP
Sbjct: 295 F-SLGGSPYPGVQMDE--DFCSRLREG----MRMRAPEYSTPEIYQIMLDCWHRDPKERP 347
Query: 251 RFSEI 255
RF+E+
Sbjct: 348 RFAEL 352
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 60/261 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTE-DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M L+ NLV+++GV E + + EY G L +L+ S+ + CL+
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKF 107
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
+ + M+YLE + VHRDLAARN +V ++ K+ SD+ L+ +
Sbjct: 108 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV-----------SDFGLTKEASS-- 154
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
+ +LP++W A E+L K +TKSD
Sbjct: 155 ---------------------------------TQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
VWSF + LWEI + PY + + V+ Y+ ++ P C ++++M
Sbjct: 182 VWSFGILLWEI-YSFGRVPYPRIPLKDVVPRVEKGYKMDA-------PDGCPPAVYEVMK 233
Query: 240 ECWKTNETDRPRFSEIHLFLQ 260
CW + RP F ++ L+
Sbjct: 234 NCWHLDAAMRPSFLQLREQLE 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 60/261 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTE-DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M L+ NLV+++GV E + + EY G L +L+ S+ + CL+
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKF 122
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
+ + M+YLE + VHRDLAARN +V ++ K+ SD+ L+ +
Sbjct: 123 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV-----------SDFGLTKEASS-- 169
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
+ +LP++W A E+L K +TKSD
Sbjct: 170 ---------------------------------TQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
VWSF + LWEI + PY + + V+ Y+ ++ P C ++++M
Sbjct: 197 VWSFGILLWEI-YSFGRVPYPRIPLKDVVPRVEKGYKMDA-------PDGCPPAVYEVMK 248
Query: 240 ECWKTNETDRPRFSEIHLFLQ 260
CW + RP F ++ L+
Sbjct: 249 NCWHLDAAMRPSFLQLREQLE 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 60/261 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTE-DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFM 59
M L+ NLV+++GV E + + EY G L +L+ S+ + CL+
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKF 113
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
+ + M+YLE + VHRDLAARN +V ++ K+ SD+ L+ +
Sbjct: 114 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV-----------SDFGLTKEASS-- 160
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
+ +LP++W A E+L +TKSD
Sbjct: 161 ---------------------------------TQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
VWSF + LWEI + PY + + V+ Y+ ++ P C ++++M
Sbjct: 188 VWSFGILLWEI-YSFGRVPYPRIPLKDVVPRVEKGYKMDA-------PDGCPPAVYEVMK 239
Query: 240 ECWKTNETDRPRFSEIHLFLQ 260
CW + RP F ++ L+
Sbjct: 240 NCWHLDAAMRPSFLQLREQLE 260
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 106/261 (40%), Gaps = 56/261 (21%)
Query: 3 SLKDPNLVRVIGVCSTEDPIST--IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+L ++++ G C S + EY G L +L H+ I L+ A
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--------IGLAQLLLFA 140
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI GM YL ++ +HRDLAARN ++ + +KI D + KA +P
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGL-------------AKA-VP- 185
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
H Y + D P+ W A E L K SDV
Sbjct: 186 ----------------EGHEXYRVREDGDS---------PVFWYAPECLKEYKFYYASDV 220
Query: 181 WSFAVTLWEILIHCN--QRP---YAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
WSF VTL+E+L HC+ Q P + EL Q + + + LPRP C E+
Sbjct: 221 WSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEV 280
Query: 235 FDLMLECWKTNETDRPRFSEI 255
+ LM CW+T + RP F +
Sbjct: 281 YHLMKNCWETEASFRPTFENL 301
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 108/266 (40%), Gaps = 56/266 (21%)
Query: 3 SLKDPNLVRVIGVCST--EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+L ++V+ G C E + + EY G L +L H + L+ A
Sbjct: 67 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--------CVGLAQLLLFA 118
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI GM YL ++ +HR LAARN ++ + +KI D+ L+
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG-----------DFGLAK------- 160
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A+ H +YY P+ W A E L K SDV
Sbjct: 161 -------------------AVPEGH---EYYRVREDGDSPVFWYAPECLKECKFYYASDV 198
Query: 181 WSFAVTLWEILIHC--NQRPYAELT----NEQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
WSF VTL+E+L +C NQ P+ + T + Q + + + LPRP C EI
Sbjct: 199 WSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEI 258
Query: 235 FDLMLECWKTNETDRPRFSEIHLFLQ 260
+ LM CW+T + RP F + LQ
Sbjct: 259 YHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 108/266 (40%), Gaps = 56/266 (21%)
Query: 3 SLKDPNLVRVIGVCST--EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+L ++V+ G C E + + EY G L +L H + L+ A
Sbjct: 66 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--------CVGLAQLLLFA 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI GM YL ++ +HR LAARN ++ + +KI D+ L+
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG-----------DFGLAK------- 159
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A+ H +YY P+ W A E L K SDV
Sbjct: 160 -------------------AVPEGH---EYYRVREDGDSPVFWYAPECLKECKFYYASDV 197
Query: 181 WSFAVTLWEILIHC--NQRPYAELT----NEQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
WSF VTL+E+L +C NQ P+ + T + Q + + + LPRP C EI
Sbjct: 198 WSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEI 257
Query: 235 FDLMLECWKTNETDRPRFSEIHLFLQ 260
+ LM CW+T + RP F + LQ
Sbjct: 258 YHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 107/261 (40%), Gaps = 56/261 (21%)
Query: 3 SLKDPNLVRVIGVCST--EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+L ++++ G C E + + EY G L +L H +I L+ A
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--------SIGLAQLLLFA 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI GM YL S+ +HR+LAARN ++ + +KI D+ L+
Sbjct: 124 QQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIG-----------DFGLAK------- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A+ H +YY P+ W A E L K SDV
Sbjct: 166 -------------------AVPEGH---EYYRVREDGDSPVFWYAPECLKEYKFYYASDV 203
Query: 181 WSFAVTLWEILIHCN--QRP---YAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
WSF VTL+E+L HC+ Q P + EL Q + + + LPRP C E+
Sbjct: 204 WSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEV 263
Query: 235 FDLMLECWKTNETDRPRFSEI 255
+ LM CW+T + RP F +
Sbjct: 264 YHLMKNCWETEASFRPTFENL 284
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 56/261 (21%)
Query: 3 SLKDPNLVRVIGVCST--EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+L ++++ G C E + + EY G L +L H +I L+ A
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--------SIGLAQLLLFA 123
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
QI GM YL ++ +HR+LAARN ++ + +KI D+ L+
Sbjct: 124 QQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIG-----------DFGLAK------- 165
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
A+ H +YY P+ W A E L K SDV
Sbjct: 166 -------------------AVPEGH---EYYRVREDGDSPVFWYAPECLKEYKFYYASDV 203
Query: 181 WSFAVTLWEILIHCN--QRP---YAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
WSF VTL+E+L HC+ Q P + EL Q + + + LPRP C E+
Sbjct: 204 WSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEV 263
Query: 235 FDLMLECWKTNETDRPRFSEI 255
+ LM CW+T + RP F +
Sbjct: 264 YHLMKNCWETEASFRPTFENL 284
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
LI + Q+A GM++L SR +HRDLAARN ++ +
Sbjct: 195 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-------------------------- 228
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
KN +KI D + Y+ Y+ ARLP++WMA E++ T
Sbjct: 229 --------------KN-VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 273
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + ++ E C + + P E++
Sbjct: 274 IQSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPEMY 326
Query: 236 DLMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 327 QTMLDCWHGEPSQRPTFSEL 346
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
LI + Q+A GM++L SR +HRDLAARN ++ +
Sbjct: 193 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-------------------------- 226
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
KN +KI D + Y+ Y+ ARLP++WMA E++ T
Sbjct: 227 --------------KN-VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 271
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + ++ E C + + P E++
Sbjct: 272 IQSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPEMY 324
Query: 236 DLMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 325 QTMLDCWHGEPSQRPTFSEL 344
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
LI + Q+A GM++L SR +HRDLAARN ++ +
Sbjct: 200 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-------------------------- 233
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
KN +KI D + Y+ Y+ ARLP++WMA E++ T
Sbjct: 234 --------------KN-VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 278
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + ++ E C + + P E++
Sbjct: 279 IQSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPEMY 331
Query: 236 DLMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 332 QTMLDCWHGEPSQRPTFSEL 351
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTK 115
LI + Q+A GM++L SR +HRDLAARN ++ +
Sbjct: 202 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-------------------------- 235
Query: 116 ARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNT 175
KN +KI D + Y+ Y+ ARLP++WMA E++ T
Sbjct: 236 --------------KN-VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 280
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SDVWSF V LWEI PY + ++ E C + + P E++
Sbjct: 281 IQSDVWSFGVLLWEIF-SLGASPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPEMY 333
Query: 236 DLMLECWKTNETDRPRFSEI 255
ML+CW + RP FSE+
Sbjct: 334 QTMLDCWHGEPSQRPTFSEL 353
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 104/260 (40%), Gaps = 62/260 (23%)
Query: 8 NLVRVIGVCSTE--DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIAS 65
N+V+ G+C+ + + I I E+ G L +L + + Y A QI
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY------AVQICK 125
Query: 66 GMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
GM YL SR VHRDLAARN +V + +KI D + TKA
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL-------------TKA--------- 163
Query: 126 CMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL--PIRWMAWESLLLGKNTTKSDVWSF 183
E+D K P+ W A E L+ K SDVWSF
Sbjct: 164 --------------------IETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
Query: 184 AVTLWEILIHC--NQRPYAEL------TNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
VTL E+L +C + P A T+ Q+ + + + LP P C E++
Sbjct: 204 GVTLHELLTYCDSDSSPMALFLKMIGPTHGQM--TVTRLVNTLKEGKRLPCPPNCPDEVY 261
Query: 236 DLMLECWKTNETDRPRFSEI 255
LM +CW+ ++R F +
Sbjct: 262 QLMRKCWEFQPSNRTSFQNL 281
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 104/260 (40%), Gaps = 62/260 (23%)
Query: 8 NLVRVIGVCSTE--DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIAS 65
N+V+ G+C+ + + I I E+ G L +L + + Y A QI
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY------AVQICK 137
Query: 66 GMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
GM YL SR VHRDLAARN +V + +KI D + TKA
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL-------------TKA--------- 175
Query: 126 CMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL--PIRWMAWESLLLGKNTTKSDVWSF 183
E+D K P+ W A E L+ K SDVWSF
Sbjct: 176 --------------------IETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
Query: 184 AVTLWEILIHC--NQRPYAEL------TNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
VTL E+L +C + P A T+ Q+ + + + LP P C E++
Sbjct: 216 GVTLHELLTYCDSDSSPMALFLKMIGPTHGQM--TVTRLVNTLKEGKRLPCPPNCPDEVY 273
Query: 236 DLMLECWKTNETDRPRFSEI 255
LM +CW+ ++R F +
Sbjct: 274 QLMRKCWEFQPSNRTSFQNL 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 106/262 (40%), Gaps = 57/262 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ PN+V +G + +S + EY G L L H ++E + + MA
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL--HKSGAREQ--LDERRRLSMA 143
Query: 61 TQIASGMKYLESRD--IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+A GM YL +R+ IVHRDL + N +V K YT+K+ C D+ LS KA
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV------C-----DFGLSRLKA-- 190
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
S + S A P WMA E L + KS
Sbjct: 191 -----------------------------SXFLXSKXAAGTP-EWMAPEVLRDEPSNEKS 220
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DV+SF V LWE+ Q+P+ L QV+ K + L P ++ ++
Sbjct: 221 DVYSFGVILWELATL--QQPWGNLNPAQVVAAVGF------KCKRLEIPRNLNPQVAAII 272
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW RP F+ I L+
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 57/262 (21%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ PN+V +G + +S + EY G L L H ++E + + MA
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL--HKSGAREQ--LDERRRLSMA 143
Query: 61 TQIASGMKYLESRD--IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
+A GM YL +R+ IVHR+L + N +V K YT+K+ C D+ LS KA
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV------C-----DFGLSRLKA-- 190
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
S + S + A P WMA E L + KS
Sbjct: 191 -----------------------------STFLSSKSAAGTP-EWMAPEVLRDEPSNEKS 220
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
DV+SF V LWE+ Q+P+ L QV+ K + L P ++ ++
Sbjct: 221 DVYSFGVILWELATL--QQPWGNLNPAQVVAAVGF------KCKRLEIPRNLNPQVAAII 272
Query: 239 LECWKTNETDRPRFSEIHLFLQ 260
CW RP F+ I L+
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLR 294
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 102/255 (40%), Gaps = 56/255 (21%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK PN++ + GVC E + + E+ G L+ L I L+ A QI
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--------GKRIPPDILVNWAVQI 114
Query: 64 ASGMKYLESRDIV---HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
A GM YL IV HRDL + N ++ + K+ + + S+ L T L
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQ----KVENGDL------SNKILKITDFGLAR 164
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
W + T K+S Y WMA E + + SDV
Sbjct: 165 EW--------HRTTKMSAAGAYA-------------------WMAPEVIRASMFSKGSDV 197
Query: 181 WSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLE 240
WS+ V LWE+L + P+ + I+ + Y + LP P+TC + LM +
Sbjct: 198 WSYGVLLWELL--TGEVPF------RGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMED 249
Query: 241 CWKTNETDRPRFSEI 255
CW + RP F+ I
Sbjct: 250 CWNPDPHSRPSFTNI 264
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 50/264 (18%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ PN+++ IGV + ++ I EY + G L ++ + + +S+ A
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF------A 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKA-RLP 119
IASGM YL S +I+HRDL + NC+V +N + ++D + + ++ + P
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSD 179
R +VG Y WMA E + K D
Sbjct: 175 DRKKRYTVVGNPY------------------------------WMAPEMINGRSYDEKVD 204
Query: 180 VWSFAVTLWEILIHCNQRP-YAELTNEQVIENCSHWYQNNSKQQYLPR--PATCQKEIFD 236
V+SF + L EI+ N P Y T + + + + +L R P C F
Sbjct: 205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGL----------NVRGFLDRYCPPNCPPSFFP 254
Query: 237 LMLECWKTNETDRPRFSEIHLFLQ 260
+ + C + RP F ++ +L+
Sbjct: 255 ITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I + LI +A Q A GM YL ++ I+
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAKSII 131
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 165
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESL-LLGKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 166 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 208
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 209 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR---SNCPKAMKRLMAECLKKKRDERPLF 265
Query: 253 SEI 255
+I
Sbjct: 266 PQI 268
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I + LI +A Q A GM YL ++ I+
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAKSII 126
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 160
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESL-LLGKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 161 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 203
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 204 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR---SNCPKAMKRLMAECLKKKRDERPLF 260
Query: 253 SEI 255
+I
Sbjct: 261 PQI 263
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I LI +A Q A GM YL ++ I+
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHAKSII 128
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 162
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESL-LLGKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 163 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 205
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 206 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---RSNCPKAMKRLMAECLKKKRDERPLF 262
Query: 253 SEI 255
+I
Sbjct: 263 PQI 265
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I + LI +A Q A GM YL ++ I+
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAKSII 131
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 165
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESL-LLGKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 166 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 208
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 209 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR---SNCPKAMKRLMAECLKKKRDERPLF 265
Query: 253 SEI 255
+I
Sbjct: 266 PQI 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I LI +A Q A GM YL ++ I+
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 188
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL-GKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 189 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 231
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 232 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---RSNCPKAMKRLMAECLKKKRDERPLF 288
Query: 253 SEI 255
+I
Sbjct: 289 PQI 291
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L H+ ++ E LI +A Q A GM YL ++ I+
Sbjct: 77 STKPQLAIVTQWCEGSSL-----YHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGL---------------ATVKSRWSGS----------- 164
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN---TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + + + +SDV++F + L+E++
Sbjct: 165 -------HQFEQ---LSGS-----ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM-- 207
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+IE + + + C K + LM EC K +RP F
Sbjct: 208 TGQLPYSNINNRDQIIEMVG---RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 264
Query: 253 SEI 255
I
Sbjct: 265 PRI 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I LI +A Q A GM YL ++ I+
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHAKSII 153
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 187
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL-GKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 188 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 230
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 231 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---RSNCPKAMKRLMAECLKKKRDERPLF 287
Query: 253 SEI 255
+I
Sbjct: 288 PQI 290
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST ++ + ++CE L L I + LI +A Q A GM YL ++ I+
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAKSII 126
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D + A + RW +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGL---------------ATVKSRWSGS----------- 160
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESL-LLGKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 161 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 203
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 204 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR---SNCPKAMKRLMAECLKKKRDERPLF 260
Query: 253 SEI 255
+I
Sbjct: 261 PQI 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 56/242 (23%)
Query: 18 TEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVH 77
T+D ++ + ++CE L L + Q LI +A Q A GM YL +++I+H
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQ------MFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 78 RDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKIS 137
RD+ + N + + T+KI D + A + RW + V
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGL---------------ATVKSRWSGSQQV--------- 191
Query: 138 DHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN---TTKSDVWSFAVTLWEILIHC 194
+ + WMA E + + N + +SDV+S+ + L+E++
Sbjct: 192 -----------------EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM--T 232
Query: 195 NQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFS 253
+ PY+ + N +Q+I Y + + C K + L+ +C K + +RP F
Sbjct: 233 GELPYSHINNRDQIIFMVGRGYASPDLSKLY---KNCPKAMKRLVADCVKKVKEERPLFP 289
Query: 254 EI 255
+I
Sbjct: 290 QI 291
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I LI +A Q A GM YL ++ I+
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHAKSII 146
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D+ L+ K+ RW +
Sbjct: 147 HRDLKSNNIFLHEDLTVKI-----------GDFGLATEKS----RWSGS----------- 180
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL-GKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 181 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 223
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 224 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---RSNCPKAMKRLMAECLKKKRDERPLF 280
Query: 253 SEI 255
+I
Sbjct: 281 PQI 283
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I LI +A Q A GM YL ++ I+
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D+ L+ K+ RW +
Sbjct: 127 HRDLKSNNIFLHEDLTVKI-----------GDFGLATEKS----RWSGS----------- 160
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESL-LLGKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 161 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 203
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 204 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR---SNCPKAMKRLMAECLKKKRDERPLF 260
Query: 253 SEI 255
+I
Sbjct: 261 PQI 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L L I LI +A Q A GM YL ++ I+
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D+ L+ K+ RW +
Sbjct: 155 HRDLKSNNIFLHEDLTVKI-----------GDFGLATEKS----RWSGS----------- 188
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL-GKN--TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + KN + +SDV++F + L+E++
Sbjct: 189 -------HQFEQ---LSGS-----ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-- 231
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+I Y + + + C K + LM EC K +RP F
Sbjct: 232 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR---SNCPKAMKRLMAECLKKKRDERPLF 288
Query: 253 SEI 255
+I
Sbjct: 289 PQI 291
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST+ ++ + ++CE L H+ ++ E LI +A Q A GM YL ++ I+
Sbjct: 89 STKPQLAIVTQWCEGSSL-----YHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D+ L+ K+ RW +
Sbjct: 143 HRDLKSNNIFLHEDNTVKI-----------GDFGLATEKS----RWSGS----------- 176
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN---TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + + + +SDV++F + L+E++
Sbjct: 177 -------HQFEQ---LSGS-----ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM-- 219
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+IE + + + C K + LM EC K +RP F
Sbjct: 220 TGQLPYSNINNRDQIIEMVG---RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
Query: 253 SEI 255
I
Sbjct: 277 PRI 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 56/243 (23%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
ST ++ + ++CE L H+ ++ E LI +A Q A GM YL ++ I+
Sbjct: 89 STAPQLAIVTQWCEGSSL-----YHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL + N + ++ T+KI D+ L+ K+ RW +
Sbjct: 143 HRDLKSNNIFLHEDNTVKI-----------GDFGLATEKS----RWSGS----------- 176
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN---TTKSDVWSFAVTLWEILIH 193
+E LS + I WMA E + + + + +SDV++F + L+E++
Sbjct: 177 -------HQFEQ---LSGS-----ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM-- 219
Query: 194 CNQRPYAELTN-EQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRF 252
Q PY+ + N +Q+IE + + + C K + LM EC K +RP F
Sbjct: 220 TGQLPYSNINNRDQIIEMVG---RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
Query: 253 SEI 255
I
Sbjct: 277 PRI 279
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 108/261 (41%), Gaps = 57/261 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P+LV +IG C + + I +Y E G+L L + + ++S+ + + A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM---SMSWEQRLEICIGAA 149
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
G+ YL +R I+HRD+ + N ++ +N+ KI+D + E
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE------------------ 191
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+G+ + + + + + +Y++ G+ T KSDV+SF
Sbjct: 192 ---LGQTHLXXVVKGTL--GYIDPEYFIK------------------GRLTEKSDVYSFG 228
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWY---QNNSKQQYLPRPATCQK-------EI 234
V L+E+L C + + +++ N + W NN + + + P K +
Sbjct: 229 VVLFEVL--CARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 235 FDLMLECWKTNETDRPRFSEI 255
D ++C + DRP ++
Sbjct: 286 GDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 57/261 (21%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P+LV +IG C + + I +Y E G+L L + + ++S+ + + A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM---SMSWEQRLEICIGAA 149
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
G+ YL +R I+HRD+ + N ++ +N+ KI +D+ +S L +
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKI-----------TDFGISKKGTELDQTHLX 198
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
+ G + + +Y++ G+ T KSDV+SF
Sbjct: 199 XVVKGT------------LGYIDPEYFIK------------------GRLTEKSDVYSFG 228
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWY---QNNSKQQYLPRPATCQK-------EI 234
V L+E+L C + + +++ N + W NN + + + P K +
Sbjct: 229 VVLFEVL--CARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 235 FDLMLECWKTNETDRPRFSEI 255
D ++C + DRP ++
Sbjct: 286 GDTAVKCLALSSEDRPSMGDV 306
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 58/257 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIH-NCNSQENPAISYGCLIFM 59
M L +LV GVC D +QE+ +FG L T+L+ + NC I+ + +
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC-------INILWKLEV 118
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
A Q+A+ M +LE ++H ++ A+N ++ I+ D
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILL-----IREEDRK-------------------- 153
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN-TTKS 178
G IK+SD + + D + R+P W+ E + KN +
Sbjct: 154 --------TGNPPFIKLSDPGISITVLPKDIL----QERIP--WVPPECIENPKNLNLAT 199
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D WSF TLWEI +P + L +++ ++ +Y++ + LP P E+ +L+
Sbjct: 200 DKWSFGTTLWEI-CSGGDKPLSALDSQRKLQ----FYED---RHQLPAPKAA--ELANLI 249
Query: 239 LECWKTNETDRPRFSEI 255
C RP F I
Sbjct: 250 NNCMDYEPDHRPSFRAI 266
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 58/257 (22%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIH-NCNSQENPAISYGCLIFM 59
M L +LV GVC D +QE+ +FG L T+L+ + NC I+ + +
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC-------INILWKLEV 118
Query: 60 ATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLP 119
A Q+A M +LE ++H ++ A+N ++ I+ D
Sbjct: 119 AKQLAWAMHFLEENTLIHGNVCAKNILL-----IREEDRK-------------------- 153
Query: 120 IRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN-TTKS 178
G IK+SD + + D + R+P W+ E + KN +
Sbjct: 154 --------TGNPPFIKLSDPGISITVLPKDIL----QERIP--WVPPECIENPKNLNLAT 199
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLM 238
D WSF TLWEI +P + L +++ ++ +Y++ + LP P E+ +L+
Sbjct: 200 DKWSFGTTLWEI-CSGGDKPLSALDSQRKLQ----FYED---RHQLPAPKAA--ELANLI 249
Query: 239 LECWKTNETDRPRFSEI 255
C RP F I
Sbjct: 250 NNCMDYEPDHRPSFRAI 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 92/256 (35%), Gaps = 69/256 (26%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN+V++ G C +P+ + EY E G L L ++ P + + Q + G
Sbjct: 62 PNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQG 115
Query: 67 MKYLES---RDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWM 123
+ YL S + ++HRDL N +
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLL------------------------------------- 138
Query: 124 ANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSF 183
+V +KI D C D T + WMA E + K DV+S+
Sbjct: 139 ---LVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSW 190
Query: 184 AVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQ----QYLPRPATCQKEIFDLML 239
+ LWE++ ++P+ E+ W +N + + LP+P I LM
Sbjct: 191 GIILWEVIT--RRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKP------IESLMT 239
Query: 240 ECWKTNETDRPRFSEI 255
CW + + RP EI
Sbjct: 240 RCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 92/256 (35%), Gaps = 69/256 (26%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN+V++ G C +P+ + EY E G L L ++ P + + Q + G
Sbjct: 61 PNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQG 114
Query: 67 MKYLES---RDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWM 123
+ YL S + ++HRDL N +
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLL------------------------------------- 137
Query: 124 ANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSF 183
+V +KI D C D T + WMA E + K DV+S+
Sbjct: 138 ---LVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSW 189
Query: 184 AVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQ----QYLPRPATCQKEIFDLML 239
+ LWE++ ++P+ E+ W +N + + LP+P I LM
Sbjct: 190 GIILWEVIT--RRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKP------IESLMT 238
Query: 240 ECWKTNETDRPRFSEI 255
CW + + RP EI
Sbjct: 239 RCWSKDPSQRPSMEEI 254
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 60 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF------- 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHA 99
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 151
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + I EY G++ +L H ++ +
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF------- 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIAD 154
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + I EY G++ +L H ++ +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF------- 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIAD 157
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF------- 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF------- 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF------- 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF------- 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF------- 119
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L PN+V++ V TE + + EY G++ +L H ++ + QI
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-------RQI 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGF 159
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
LK N+VR+ V ++ ++ + E+C+ DL + +CN +P I L Q
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFD--SCNGDLDPEIVKSFLF----Q 109
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ G+ + SR+++HRDL +N ++ +N +K++D +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L PN+V++ V TE + + EY G++ +L H ++ +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF------- 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
QI S ++Y + IVHRDL A N ++ + IKI+D
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIAD 157
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 2 CSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMAT 61
C LK P+++ + + + + E C G+++ +L+ EN A +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF------MH 119
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
QI +GM YL S I+HRDL N ++ +N IKI+D +
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL 158
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P ++R+ G I I +Y E G+L + L+ NP F A ++
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAK-----FYAAEVCLA 118
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++YL S+DI++RDL N ++ KN IKI+D
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF 152
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
LK N+VR+ V ++ ++ + E+C+ DL + +CN +P I L Q
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFD--SCNGDLDPEIVKSFLF----Q 109
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ G+ + SR+++HRDL +N ++ +N +K+++ +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL 147
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P ++I+++ E ++T + N ++ A+S + F+ Q+ G+KY+
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S I+HRDL N V ++ ++I D +
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGL 177
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 40 IHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHA 99
I+N + ++NP IF QI SG+++L R+I++RDL N ++ + ++ISD
Sbjct: 276 IYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 100 MYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 159
+ ++ + A P ++G+ Y + A+ + YE AR
Sbjct: 335 L-AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM------IAARG 387
Query: 160 PIR 162
P R
Sbjct: 388 PFR 390
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 40 IHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHA 99
I+N + ++NP IF QI SG+++L R+I++RDL N ++ + ++ISD
Sbjct: 276 IYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 100 MYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 159
+ ++ + A P ++G+ Y + A+ + YE AR
Sbjct: 335 L-AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM------IAARG 387
Query: 160 PIR 162
P R
Sbjct: 388 PFR 390
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 40 IHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHA 99
I+N + ++NP IF QI SG+++L R+I++RDL N ++ + ++ISD
Sbjct: 276 IYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 100 MYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 159
+ ++ + A P ++G+ Y + A+ + YE AR
Sbjct: 335 L-AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM------IAARG 387
Query: 160 PIR 162
P R
Sbjct: 388 PFR 390
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P L + T D + + EY G+L L ++E F +I
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIV 115
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S ++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 158
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P L + T D + + EY G+L L ++E F +I
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIV 115
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S ++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 158
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P L + T D + + EY G+L L ++E F +I
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIV 115
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S ++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 158
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P L + T D + + EY G+L L ++E F +I
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIV 118
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S ++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 161
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 80/221 (36%), Gaps = 66/221 (29%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQEN--PAISYGCLIFMAT 61
L+ PN ++ G E + EYC G S L++H QE A+++G L
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGAL----- 164
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
G+ YL S +++HRD+ A N ++ + +K+ D I
Sbjct: 165 ---QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS-----------------IM 204
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL---GKNTTKS 178
AN VG Y WMA E +L G+ K
Sbjct: 205 APANXFVGTPY------------------------------WMAPEVILAMDEGQYDGKV 234
Query: 179 DVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNS 219
DVWS +T E+ ++P L N + H QN S
Sbjct: 235 DVWSLGITCIEL---AERKP--PLFNMNAMSALYHIAQNES 270
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P L + T D + + EY G+L L ++E F +I
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIV 115
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S ++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 158
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
+ P L + T D + + EY G+L L ++E F +I
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIV 115
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S ++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 158
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 40 IHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHA 99
I+N + ++NP IF QI SG+++L R+I++RDL N ++ + ++ISD
Sbjct: 276 IYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 100 MYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 159
+ ++ + A P ++G+ Y + A+ + YE AR
Sbjct: 335 L-AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM------IAARG 387
Query: 160 PIR 162
P R
Sbjct: 388 PFR 390
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 63/261 (24%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L PN+V++ G+ +P + E+ GDL H + +P I + + +
Sbjct: 77 MSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDL-----YHRLLDKAHP-IKWSVKLRLM 128
Query: 61 TQIASGMKYLESRD--IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
IA G++Y+++++ IVHRDL + N + + ++A C+ +D+ LS
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNI-----FLQSLDENAPVCAKV-ADFSLSQQSVHS 182
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN--TT 176
+ N +WMA E++ + T
Sbjct: 183 VSGLLGN-----------------------------------FQWMAPETIGAEEESYTE 207
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPR--PATCQKEI 234
K+D +SFA+ L+ IL + P+ E + ++ + N +++ L P C +
Sbjct: 208 KADTYSFAMILYTIL--TGEGPFDEYSYGKI------KFINMIREEGLRPTIPEDCPPRL 259
Query: 235 FDLMLECWKTNETDRPRFSEI 255
+++ CW + RP FS I
Sbjct: 260 RNVIELCWSGDPKKRPHFSYI 280
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P L + T D + + EY G+L L ++E F +I S
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-------FYGAEIVSA 122
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
++YL SRD+V+RD+ N M+ K+ IKI+D + C SD
Sbjct: 123 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISD 163
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 63/261 (24%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L PN+V++ G+ +P + E+ GDL H + +P I + + +
Sbjct: 77 MSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDL-----YHRLLDKAHP-IKWSVKLRLM 128
Query: 61 TQIASGMKYLESRD--IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
IA G++Y+++++ IVHRDL + N + + ++A C+ +D+ LS
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNI-----FLQSLDENAPVCAKV-ADFGLSQQSVHS 182
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN--TT 176
+ N +WMA E++ + T
Sbjct: 183 VSGLLGN-----------------------------------FQWMAPETIGAEEESYTE 207
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPR--PATCQKEI 234
K+D +SFA+ L+ IL + P+ E + ++ + N +++ L P C +
Sbjct: 208 KADTYSFAMILYTIL--TGEGPFDEYSYGKI------KFINMIREEGLRPTIPEDCPPRL 259
Query: 235 FDLMLECWKTNETDRPRFSEI 255
+++ CW + RP FS I
Sbjct: 260 RNVIELCWSGDPKKRPHFSYI 280
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N ++ ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDY--YLSDTKARLP---IRWM 123
S DI+HRDL N V ++ +KI D + C H + + Y++ R P + WM
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGL-CRHTDDEMTGYVATRWYRAPEIMLNWM 198
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 81/224 (36%), Gaps = 66/224 (29%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQEN--PAISYGCLIF 58
+ L+ PN ++ G E + EYC G S L++H QE A+++G L
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGAL-- 125
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
G+ YL S +++HRD+ A N ++ + +K+ D
Sbjct: 126 ------QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS---------------- 163
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLL---GKNT 175
I AN VG Y WMA E +L G+
Sbjct: 164 -IMAPANXFVGTPY------------------------------WMAPEVILAMDEGQYD 192
Query: 176 TKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNS 219
K DVWS +T E+ ++P L N + H QN S
Sbjct: 193 GKVDVWSLGITCIEL---AERKP--PLFNMNAMSALYHIAQNES 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 77/202 (38%), Gaps = 52/202 (25%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P L + T++ + + EY GDL I +C+ F A +I G
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHK-----FDLSRATFYAAEIILG 130
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANC 126
+++L S+ IV+RDL N ++ K+ IKI+D M C + L D K
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-C----KENMLGDAKTN--------- 176
Query: 127 MVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVT 186
+C DY +A E LL K D WSF V
Sbjct: 177 --------------XFCG--TPDY-------------IAPEILLGQKYNHSVDWWSFGVL 207
Query: 187 LWEILIHCNQRPYAELTNEQVI 208
L+E+LI Q P+ E++
Sbjct: 208 LYEMLI--GQSPFHGQDEEELF 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 63/261 (24%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M +L PN+V++ G+ +P + E+ GDL H + +P I + + +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL-----YHRLLDKAHP-IKWSVKLRLM 128
Query: 61 TQIASGMKYLESRD--IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
IA G++Y+++++ IVHRDL + N + + ++A C+
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNI-----FLQSLDENAPVCA--------------- 168
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN--TT 176
K++D + + +S + +S +WMA E++ + T
Sbjct: 169 ----------------KVAD---FGTSQQSVHSVSGLLGNF--QWMAPETIGAEEESYTE 207
Query: 177 KSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPR--PATCQKEI 234
K+D +SFA+ L+ IL + P+ E + ++ + N +++ L P C +
Sbjct: 208 KADTYSFAMILYTIL--TGEGPFDEYSYGKI------KFINMIREEGLRPTIPEDCPPRL 259
Query: 235 FDLMLECWKTNETDRPRFSEI 255
+++ CW + RP FS I
Sbjct: 260 RNVIELCWSGDPKKRPHFSYI 280
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 77/202 (38%), Gaps = 52/202 (25%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P L + T++ + + EY GDL I +C+ F A +I G
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHK-----FDLSRATFYAAEIILG 131
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANC 126
+++L S+ IV+RDL N ++ K+ IKI+D M C + L D K
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-C----KENMLGDAKTN--------- 177
Query: 127 MVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVT 186
+C DY +A E LL K D WSF V
Sbjct: 178 --------------EFCG--TPDY-------------IAPEILLGQKYNHSVDWWSFGVL 208
Query: 187 LWEILIHCNQRPYAELTNEQVI 208
L+E+LI Q P+ E++
Sbjct: 209 LYEMLI--GQSPFHGQDEEELF 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%), Gaps = 44/254 (17%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N+V +G C + ++ I C+ L + ++ N +A +I GM
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ------IAQEIVKGM 143
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
YL ++ I+H+DL ++N N + I+D ++ + K R+ W+ C
Sbjct: 144 GYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL--CH 200
Query: 128 VGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTL 187
+ ++S E D +LP + SDV++
Sbjct: 201 LAPEIIRQLSPDT------EED--------KLPF-------------SKHSDVFALGTIW 233
Query: 188 WEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNET 247
+E +H + P+ E +I + N Q KEI D++L CW +
Sbjct: 234 YE--LHAREWPFKTQPAEAIIWQMGTGMKPNLSQ------IGMGKEISDILLFCWAFEQE 285
Query: 248 DRPRFSEIHLFLQR 261
+RP F+++ L++
Sbjct: 286 ERPTFTKLMDMLEK 299
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR+ VC+ E ++ + E+ + DL+T+L + P + +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYL-----DKVPEPGVPTETIK 123
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
M Q+ G+ +L S +VHRDL +N +V + IK++D +
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P ++I+++ E ++T + N + A+S + F+ Q+ G+KY+
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S I+HRDL N V ++ ++I D +
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGL 177
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR+ VC+ E ++ + E+ + DL+T+L + P + +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYL-----DKVPEPGVPTETIK 123
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
M Q+ G+ +L S +VHRDL +N +V + IK++D +
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR+ VC+ E ++ + E+ + DL+T+L + P + +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYL-----DKVPEPGVPTETIK 123
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
M Q+ G+ +L S +VHRDL +N +V + IK++D +
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P ++I+++ E ++T + N + A+S + F+ Q+ G+KY+
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S I+HRDL N V ++ ++I D +
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGL 169
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++K PN+V+ + + +YCE GDL N+Q+ ++
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL-----FKRINAQKGVLFQEDQILDWF 131
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
QI +K++ R I+HRD+ ++N + K+ T+++ D +
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI 171
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT-------YITEL 121
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G N +KI+D
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIAD 155
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR++ VC+T E ++ + E+ + DL T+L + P + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYL-----DKAPPPGLPAETIK 115
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Q G+ +L + IVHRDL N +V T+K++D +
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT-------YITEL 121
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G N +KI+D
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIAD 155
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR++ VC+T E ++ + E+ + DL T+L + P + +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYL-----DKAPPPGLPAETIK 123
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Q G+ +L + IVHRDL N +V T+K++D +
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR++ VC+T E ++ + E+ + DL T+L + P + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYL-----DKAPPPGLPAETIK 115
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Q G+ +L + IVHRDL N +V T+K++D +
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 3 SLKDPNLVRVIGVCST-----EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLI 57
+ + PN+VR++ VC+T E ++ + E+ + DL T+L + P + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYL-----DKAPPPGLPAETIK 115
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Q G+ +L + IVHRDL N +V T+K++D +
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGL 171
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 2 CSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMAT 61
L N+V +I V +D + EY E LS +++ H +S I
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTN 118
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
QI G+K+ IVHRD+ +N ++ N T+KI D +
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI 157
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K P L ++ T D + + EY GDL I + P +F A +IA
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHA-----VFYAAEIA 131
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
G+ +L+S+ I++RDL N M+ IKI+D M
Sbjct: 132 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 51/266 (19%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M + NLV ++G S D + + Y G L L + P +S+ +A
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----PPLSWHMRCKIA 139
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
A+G+ +L +HRD+ + N ++ + +T KI SD+ L+ +
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKI-----------SDFGLARASEKFAQ 188
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
M + +VG +MA E+ L G+ T KSD+
Sbjct: 189 TVMXSRIVGTT------------------------------AYMAPEA-LRGEITPKSDI 217
Query: 181 WSFAVTLWEIL-----IHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SF V L EI+ + ++ P L ++ IE+ ++ ++ +T + ++
Sbjct: 218 YSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY 277
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+ +C + RP ++ LQ
Sbjct: 278 SVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 118
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYC 102
A+ + Y S+ ++HRD+ N ++G +KI+D C
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSC 157
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K P L ++ T D + + EY GDL I + P +F A +IA
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHA-----VFYAAEIA 452
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
G+ +L+S+ I++RDL N M+ IKI+D M
Sbjct: 453 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 51/266 (19%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M + NLV ++G S D + + Y G L L + P +S+ +A
Sbjct: 78 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----PPLSWHMRCKIA 133
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
A+G+ +L +HRD+ + N ++ + +T KI SD+ L+ +
Sbjct: 134 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKI-----------SDFGLARASEKFAQ 182
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
M +VG +MA E+ L G+ T KSD+
Sbjct: 183 XVMXXRIVGTT------------------------------AYMAPEA-LRGEITPKSDI 211
Query: 181 WSFAVTLWEIL-----IHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SF V L EI+ + ++ P L ++ IE+ ++ ++ +T + ++
Sbjct: 212 YSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY 271
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+ +C + RP ++ LQ
Sbjct: 272 SVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGL 182
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGL 176
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K P L ++ T D + + EY GDL I + P +F A +I+
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQA-----VFYAAEIS 130
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSH 104
G+ +L R I++RDL N M+ IKI+D M H
Sbjct: 131 IGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 170
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGL 176
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ N V+ + + + EYCE G L + N N Q + Y L QI
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD---EYWRLF---RQI 125
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Y+ S+ I+HRDL N + ++ +KI D +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D+ +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGL 171
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 51/266 (19%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M + NLV ++G S D + + Y G L L + P +S+ +A
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----PPLSWHMRCKIA 139
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
A+G+ +L +HRD+ + N ++ + +T KI SD+ L+ +
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKI-----------SDFGLARASEKFAQ 188
Query: 121 RWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDV 180
M +VG +MA E+ L G+ T KSD+
Sbjct: 189 TVMXXRIVGTT------------------------------AYMAPEA-LRGEITPKSDI 217
Query: 181 WSFAVTLWEIL-----IHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIF 235
+SF V L EI+ + ++ P L ++ IE+ ++ ++ +T + ++
Sbjct: 218 YSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY 277
Query: 236 DLMLECWKTNETDRPRFSEIHLFLQR 261
+ +C + RP ++ LQ
Sbjct: 278 SVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL TF+ P I +F
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKTFMDASALTGIPLPLIK--SYLF-- 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGL 177
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGL 173
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL TF+ P I +F
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEHVH-QDLKTFMDASALTGIPLPLIK--SYLF-- 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M LK N+VR+ V TE+ ++ + E+ + DL ++ + + + +
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPR-GLELNLVKYFQ 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + I+HRDL +N ++ K +K+ D +
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGL 154
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKKVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P ++++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFGL 200
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGL 171
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ I + E+ G+L LQ H ++ A FM ++
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT------FM-EEL 123
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A + Y R ++HRD+ N ++G +KI+D
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIAD 157
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGL 167
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ I + E+ G+L LQ H ++ A FM ++
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT------FM-EEL 124
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A + Y R ++HRD+ N ++G +KI+D
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIAD 158
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ I + E+ G+L LQ H ++ A FM ++
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT------FM-EEL 123
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A + Y R ++HRD+ N ++G +KI+D
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIAD 157
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGL 176
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGL 168
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGL 167
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 114
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 115 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 148
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGL 168
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 116
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 117 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 150
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGL 169
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGL 167
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGL 177
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGL 173
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGL 167
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 121
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 155
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGL 178
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGL 194
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGL 176
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGL 182
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGL 170
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGL 177
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGL 183
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGL 183
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGL 194
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGL 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGL 173
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGL 178
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGL 178
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGL 183
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGL 191
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGL 190
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGL 181
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGL 171
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGL 171
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGL 178
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGL 190
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGL 191
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGL 177
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
S DI+HRDL N V ++ +KI D Y + + D
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILD--FYLARHTDD 177
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGL 191
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G++ LQ + ++ A T++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT-------YITEL 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S DI+HRDL N V ++ +KI D +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G++ LQ + ++ A T++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT-------YITEL 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 119
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 153
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 118
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 118
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 27 EYCEFGDLSTFL-QIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNC 85
EYCE GDL +L Q NC + G + + + I+S ++YL I+HRDL N
Sbjct: 98 EYCEGGDLRKYLNQFENCC-----GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152
Query: 86 MV 87
++
Sbjct: 153 VL 154
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 27 EYCEFGDLSTFL-QIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNC 85
EYCE GDL +L Q NC + G + + + I+S ++YL I+HRDL N
Sbjct: 99 EYCEGGDLRKYLNQFENCC-----GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 153
Query: 86 MV 87
++
Sbjct: 154 VL 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 66 GMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
G+KY+ S I+HRDL NC+V ++ ++K+ D + + Y + ++LPI +
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL----ARTVDYPENGNSQLPISPRED 223
Query: 126 CMV------GKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRW-MAWESLLLGKNTTKS 178
M KN +++ H + RW A E +LL +N T++
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVV-------------------TRWYRAPELILLQENYTEA 264
Query: 179 -DVWSFAVTLWEIL 191
DVWS E+L
Sbjct: 265 IDVWSIGCIFAELL 278
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 54/254 (21%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL PN++++ V + + E CE G+L L+ A+S G + + Q
Sbjct: 76 SLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL---LERIVSAQARGKALSEGYVAELMKQ 132
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRW 122
+ + + Y S+ +VH+DL N + DT P
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENIL------------------------FQDTSPHSP--- 165
Query: 123 MANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT-KSDVW 181
IKI D + ++SD + T A +MA E + ++ T K D+W
Sbjct: 166 -----------IKIIDFGL-AELFKSDEH--STNAAGTALYMAPE--VFKRDVTFKCDIW 209
Query: 182 SFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLEC 241
S V ++ +L C P+ + E+V + ++ N + + RP T Q DL+ +
Sbjct: 210 SAGVVMYFLLTGC--LPFTGTSLEEVQQKATYKEPNYAVE---CRPLTPQA--VDLLKQM 262
Query: 242 WKTNETDRPRFSEI 255
+ RP +++
Sbjct: 263 LTKDPERRPSAAQV 276
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIK--SYLF-- 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P T+ ++ +F + F+ ++ + + F+ Q+ G++Y+
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ I+HRDL N V ++ +KI D +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGL 174
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIK--SYLF-- 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 113 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 118 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 134
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 135 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 168
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ + DL F+ P I +F
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIK--SYLF-- 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIK--SYLF-- 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL N ++ IK++D +
Sbjct: 112 -QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K+PN+V + D + + EY G L+ + + + A+ CL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------- 126
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
+++L S ++HRD+ + N ++G + ++K++D +C+ + T P WMA
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG-FCAQITPEQSKRSTMVGTPY-WMA 184
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 143
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 177
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIK--SYLF-- 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL N ++ IK++D +
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 113 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 112 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 117
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 118 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFG-DLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
N+++V+ + + + E G DL F+ H + P SY IF Q+ S
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASY---IF--RQLVSA 142
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHA 99
+ YL +DI+HRD+ N ++ +++TIK+ D
Sbjct: 143 VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 112 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 109
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 112 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 115 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 113 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 113
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 143
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI+D
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 177
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P S+++ + +F + F+Q + S + ++ Q+ G+KY+
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S +VHRDL N V ++ +KI D +
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGL 172
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK N+V+ +G S I E G LS L+ ++N + F QI
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ----TIGFYTKQI 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGK-NYTIKISD 97
G+KYL IVHRD+ N ++ + +KISD
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISD 152
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P S+++ + +F + F+Q + S + ++ Q+ G+KY+
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 72 SRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S +VHRDL N V ++ +KI D +
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGL 190
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL +N ++ IK++D +
Sbjct: 115 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 111
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL N ++ IK++D +
Sbjct: 112 -QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIK--SYLF-- 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL N ++ IK++D +
Sbjct: 113 -QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 151
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNS-QENPAISYGCLIFMAT 61
SL PN++++ V + + E+ E G+L F QI N + E A + +
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAAN------IMK 153
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV-GKN--YTIKISDHAMYCSHYESDYYLSD 113
QI SG+ YL +IVHRD+ N ++ KN IKI D + S + DY L D
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL-SSFFSKDYKLRD 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK N+V+ +G S I E G LS L+ ++N + F QI
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ----TIGFYTKQI 131
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGK-NYTIKISD 97
G+KYL IVHRD+ N ++ + +KISD
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISD 166
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN+V+++ V TE+ + + E+ DL F+ P I +F
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIK--SYLF-- 110
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ + S ++HRDL N ++ IK++D +
Sbjct: 111 -QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 149
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18 TEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVH 77
T D +S I + GDL L H S+ + + F A +I G++++ +R +V+
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVY 315
Query: 78 RDLAARNCMVGKNYTIKISDHAMYCS 103
RDL N ++ ++ ++ISD + C
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACD 341
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18 TEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVH 77
T D +S I + GDL L H S+ + + F A +I G++++ +R +V+
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVY 315
Query: 78 RDLAARNCMVGKNYTIKISDHAMYCS 103
RDL N ++ ++ ++ISD + C
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACD 341
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT 114
F + G++YL + I+HRD+ N +VG++ IKI+D + SD LS+T
Sbjct: 141 FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18 TEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVH 77
T D +S I + GDL L H S+ + + F A +I G++++ +R +V+
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVY 315
Query: 78 RDLAARNCMVGKNYTIKISDHAMYCS 103
RDL N ++ ++ ++ISD + C
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACD 341
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18 TEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVH 77
T D +S I + GDL L H S+ + + F A +I G++++ +R +V+
Sbjct: 262 TPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVY 314
Query: 78 RDLAARNCMVGKNYTIKISDHAMYCS 103
RDL N ++ ++ ++ISD + C
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLACD 340
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLE 71
VIG+ P +++E+ + ++ + N + ++ + F+ QI G+KY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 72 SRDIVHRDLAARNCMVGKNYTIKI 95
S DI+HRDL N V ++ +KI
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKI 166
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI++
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 154
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMY----CSHYESDYYLSDTKAR 117
Q+ G+KY+ S ++HRDL N +V +N +KI D M S E Y++++ A
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA- 225
Query: 118 LPIRW 122
RW
Sbjct: 226 --TRW 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++K P LV + T D + + +Y G+L LQ C + F A
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRAR-------FYA 145
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+IAS + YL S +IV+RDL N ++ I ++D +
Sbjct: 146 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ N V+ + + + EYCE L + N N Q + Y L QI
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD---EYWRLF---RQI 125
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Y+ S+ I+HRDL N + ++ +KI D +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMY----CSHYESDYYLSDTKAR 117
Q+ G+KY+ S ++HRDL N +V +N +KI D M S E Y++++ A
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA- 224
Query: 118 LPIRW 122
RW
Sbjct: 225 --TRW 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ PN++R+ G + I EY G + LQ + ++ A T++
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 119
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A+ + Y S+ ++HRD+ N ++G +KI++
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 153
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIF 58
+ +K N +I + + P T++E F D+ +++ + N + + + + +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEE---FQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Q+ G+K+L S I+HRDL N +V + T+KI D +
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K+PN+V + D + + EY G L+ + + + A+ CL
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------- 127
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
+++L S ++HRD+ + N ++G + ++K++D +C+ + P WMA
Sbjct: 128 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG-FCAQITPEQSKRSXMVGTPY-WMA 185
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K+PN+V + D + + EY G L+ + + + A+ CL
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------- 127
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
+++L S ++HR++ + N ++G + ++K++D +C+ + T P WMA
Sbjct: 128 QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFG-FCAQITPEQSKRSTMVGTPY-WMA 185
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K+PN+V + D + + EY G L+ + + + A+ CL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------- 126
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
+++L S ++HRD+ + N ++G + ++K++D +C+ + P WMA
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG-FCAQITPEQSKRSXMVGTPY-WMA 184
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 66/177 (37%), Gaps = 53/177 (29%)
Query: 19 EDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHR 78
+D + + E+C G ++ ++ N+ + I+Y C +I G+ +L ++HR
Sbjct: 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC-----REILRGLSHLHQHKVIHR 153
Query: 79 DLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISD 138
D+ +N ++ +N +K+ D + L T R N +G Y
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVSAQ-------LDRTVGR------RNTFIGTPY------ 194
Query: 139 HAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTT-----KSDVWSFAVTLWEI 190
WMA E + +N KSD+WS +T E+
Sbjct: 195 ------------------------WMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 5 KDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
K+PN+V + D + + EY G L+ + + + A+ CL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------- 126
Query: 65 SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSH 104
+++L S ++HRD+ + N ++G + ++K++D +C+
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG-FCAQ 165
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMAT 61
+K N +I + + P T++E F D+ +++ + N + + + + ++
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEE---FQDVYLVMELMDANLXQVIQMELDHERMSYLLY 133
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+K+L S I+HRDL N +V + T+KI D +
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 78 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 165
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 13 IGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLES 72
+G + + + +QEY E DL+ L+ + P + +FM Q+ G+KY+ S
Sbjct: 88 VGSLTELNSVYIVQEYME-TDLANVLE-------QGPLLEEHARLFM-YQLLRGLKYIHS 138
Query: 73 RDIVHRDLAARNCMVG-KNYTIKISDHAM---YCSHYESDYYLSDTKARLPIRWMAN--- 125
+++HRDL N + ++ +KI D + HY +LS+ L +W +
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG---LVTKWYRSPRL 195
Query: 126 CMVGKNYTIKISDHAMYC 143
+ NYT I A C
Sbjct: 196 LLSPNNYTKAIDMWAAGC 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 45/147 (30%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
+I G+ YL S +HRD+ A N ++ ++ +K++D + L+DT+ +
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ-------LTDTQIK---- 180
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVW 181
N VG + WMA E + +K+D+W
Sbjct: 181 --RNTFVGTPF------------------------------WMAPEVIKQSAYDSKADIW 208
Query: 182 SFAVTLWEILIHCNQRPYAELTNEQVI 208
S +T E + + P++EL +V+
Sbjct: 209 SLGITAIE--LARGEPPHSELHPMKVL 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P LV + TE + + EY GDL +Q +E+ F + +I+
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-------FYSAEISLA 118
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ YL R I++RDL N ++ IK++D+ M
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 100/273 (36%), Gaps = 59/273 (21%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
NL+R+ G C T + Y G +++ L+ + P + + +A A G+
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLR---ERPESQPPLDWPKRQRIALGSARGL 152
Query: 68 KYLESR---DIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
YL I+HRD+ A N ++ + + + D + A
Sbjct: 153 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL-----------------------A 189
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
M K+ + + R I +A E L GK++ K+DV+ +
Sbjct: 190 KLMDYKDXHVXXA-------------------VRGTIGHIAPEYLSTGKSSEKTDVFGYG 230
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ----------KEI 234
V L E++ A L N+ + W + K++ L +++
Sbjct: 231 VMLLELITGQRAFDLARLANDDDV-MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL 289
Query: 235 FDLMLECWKTNETDRPRFSEIHLFLQRKNLGAR 267
+ L C +++ +RP+ SE+ L+ L R
Sbjct: 290 IQVALLCTQSSPMERPKMSEVVRMLEGDGLAER 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P LV + TE + + EY GDL +Q +E+ F + +I+
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-------FYSAEISLA 122
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ YL R I++RDL N ++ IK++D+ M
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 111 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 153
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P LV + TE + + EY GDL +Q +E+ F + +I+
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-------FYSAEISLA 133
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ YL R I++RDL N ++ IK++D+ M
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 100/273 (36%), Gaps = 59/273 (21%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
NL+R+ G C T + Y G +++ L+ + P + + +A A G+
Sbjct: 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLR---ERPESQPPLDWPKRQRIALGSARGL 144
Query: 68 KYLESR---DIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMA 124
YL I+HRD+ A N ++ + + + D + A
Sbjct: 145 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL-----------------------A 181
Query: 125 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
M K+ + + R I +A E L GK++ K+DV+ +
Sbjct: 182 KLMDYKDXHVXXA-------------------VRGXIGHIAPEYLSTGKSSEKTDVFGYG 222
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ----------KEI 234
V L E++ A L N+ + W + K++ L +++
Sbjct: 223 VMLLELITGQRAFDLARLANDDDV-MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL 281
Query: 235 FDLMLECWKTNETDRPRFSEIHLFLQRKNLGAR 267
+ L C +++ +RP+ SE+ L+ L R
Sbjct: 282 IQVALLCTQSSPMERPKMSEVVRMLEGDGLAER 314
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 110 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 152
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ + P +V++ TE + I ++ GDL T L ++E+ + F
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-------VKFYL 136
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++A G+ +L S I++RDL N ++ + IK++D +
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 176
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 108 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 150
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
+L+ ++ ++ V T + I + EYC G+L ++ + S+E + + Q
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF-------RQ 116
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
I S + Y+ S+ HRDL N + + + +K+ D +
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 130 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 172
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 130 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 172
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ P+++++ V ++D I + EY +Q + QE QI
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--------FFQQI 112
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S ++Y IVHRDL N ++ ++ +KI+D +
Sbjct: 113 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 149
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P LV + TE + + EY GDL +Q +E+ F + +I+
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-------FYSAEISLA 165
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ YL R I++RDL N ++ IK++D+ M
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 109 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 151
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 115 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 157
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 45/147 (30%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
+I G+ YL S +HRD+ A N ++ ++ +K++D + L+DT+ +
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ-------LTDTQIK---- 160
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVW 181
N VG + WMA E + +K+D+W
Sbjct: 161 --RNTFVGTPF------------------------------WMAPEVIKQSAYDSKADIW 188
Query: 182 SFAVTLWEILIHCNQRPYAELTNEQVI 208
S +T E+ + P++EL +V+
Sbjct: 189 SLGITAIELA--RGEPPHSELHPMKVL 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 134 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 176
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 134 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 176
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 136 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 178
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 138 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 180
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
C F +I S ++YL + I+HRDL N ++ ++ I+I+D
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ P+++++ V ++D I + EY +Q + QE QI
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--------FFQQI 121
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S ++Y IVHRDL N ++ ++ +KI+D +
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 158
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 100/263 (38%), Gaps = 70/263 (26%)
Query: 7 PNLVRVIGVC-STEDPIST-IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIA 64
PN++ V+G C S P T I + +G L L + N + + A +A
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL-----HEGTNFVVDQSQAVKFALDMA 121
Query: 65 SGMKYLESRD--IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRW 122
GM +L + + I L +R+ M+ ++ T +IS ++D K
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS--------------MADVK------- 160
Query: 123 MANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTK---SD 179
++ + S MY W+A E+L T +D
Sbjct: 161 ---------FSFQ-SPGRMYAP-----------------AWVAPEALQKKPEDTNRRSAD 193
Query: 180 VWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPR-PATCQKEIFDLM 238
+WSFAV LWE++ + P+A+L+N ++ + + P P + LM
Sbjct: 194 MWSFAVLLWELV--TREVPFADLSNMEIGMKV-------ALEGLRPTIPPGISPHVSKLM 244
Query: 239 LECWKTNETDRPRFSEIHLFLQR 261
C + RP+F I L++
Sbjct: 245 KICMNEDPAKRPKFDMIVPILEK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ P+++++ V ++D I + EY +Q + QE QI
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--------FFQQI 116
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S ++Y IVHRDL N ++ ++ +KI+D +
Sbjct: 117 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 153
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ P+++++ V ++D I + EY +Q + QE QI
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--------FFQQI 122
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S ++Y IVHRDL N ++ ++ +KI+D +
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 159
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL+ PN+VR V T ++ + EY G+L F +I CN+ S F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERI--CNAGR---FSEDEARFFFQQ 123
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYT--IKISD 97
+ SG+ Y + + HRDL N ++ + +KI+D
Sbjct: 124 LISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIAD 160
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 45/147 (30%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
+I G+ YL S +HRD+ A N ++ ++ +K++D + L+DT+ +
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ-------LTDTQIK---- 175
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVW 181
N VG + WMA E + +K+D+W
Sbjct: 176 --RNXFVGTPF------------------------------WMAPEVIKQSAYDSKADIW 203
Query: 182 SFAVTLWEILIHCNQRPYAELTNEQVI 208
S +T E+ + P++EL +V+
Sbjct: 204 SLGITAIELA--RGEPPHSELHPMKVL 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ LK N+V++ V T+ + + E+ + DL L + + A S+
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSF------L 106
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ Y R ++HRDL +N ++ + +KI+D +
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ LK N+V++ V T+ + + E+ + DL L + + A S+
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSF------L 106
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ Y R ++HRDL +N ++ + +KI+D +
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ LK N+V++ V T+ + + E+ + DL L + + A S+
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSF------L 106
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ Y R ++HRDL +N ++ + +KI+D +
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 3 SLKDPNLVRVIG--VCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
LK PN+VR + T + + EYCE GDL++ + ++E + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEEFVLRVM 117
Query: 61 TQIASGMKYLESRD-----IVHRDLAARNCMVGKNYTIKISDHAM 100
TQ+ +K R ++HRDL N + +K+ D +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 43/132 (32%)
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARL 118
M +I G+ YL S +HRD+ A N ++ + +K++D + L+DT+ +
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQ-------LTDTQIK- 176
Query: 119 PIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKS 178
N VG + WMA E + +K+
Sbjct: 177 -----RNTFVGTPF------------------------------WMAPEVIQQSAYDSKA 201
Query: 179 DVWSFAVTLWEI 190
D+WS +T E+
Sbjct: 202 DIWSLGITAIEL 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 45/147 (30%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
+I G+ YL S +HRD+ A N ++ ++ +K++D + L+DT+ +
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ-------LTDTQIK---- 160
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVW 181
N VG + WMA E + +K+D+W
Sbjct: 161 --RNXFVGTPF------------------------------WMAPEVIKQSAYDSKADIW 188
Query: 182 SFAVTLWEILIHCNQRPYAELTNEQVI 208
S +T E+ + P++EL +V+
Sbjct: 189 SLGITAIELA--RGEPPHSELHPMKVL 213
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
+ +Y E G L +L + ++ +I +A ASG+ +L I
Sbjct: 118 VSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVG-KNYTI- 134
HRDL ++N +V KN T I+D + H + +DT P N VG K Y
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAP-----NHRVGTKRYMAP 220
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC 194
++ D ++ H+ES ++D+++ + WEI C
Sbjct: 221 EVLDDSINMKHFES--------------------------FKRADIYAMGLVFWEIARRC 254
Query: 195 N--------QRPYAELT-NEQVIENCSHWYQNNSKQQYLP-RPATCQ--KEIFDLMLECW 242
+ Q PY +L ++ +E + +P R +C+ + + +M ECW
Sbjct: 255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314
Query: 243 KTNETDR 249
N R
Sbjct: 315 YANGAAR 321
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 3 SLKDPNLVRVIG--VCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
LK PN+VR + T + + EYCE GDL++ + ++E + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEEFVLRVM 117
Query: 61 TQIASGMKYLESRD-----IVHRDLAARNCMVGKNYTIKISDHAM 100
TQ+ +K R ++HRDL N + +K+ D +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLES-RDI 75
T D + + EY G+L L S++ F +I S + YL S +++
Sbjct: 218 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHSEKNV 270
Query: 76 VHRDLAARNCMVGKNYTIKISDHAM 100
V+RDL N M+ K+ IKI+D +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 3 SLKDPNLVRVIG--VCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
LK PN+VR + T + + EYCE GDL++ + ++E + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEEFVLRVM 117
Query: 61 TQIASGMKYLESRD-----IVHRDLAARNCMVGKNYTIKISDHAM 100
TQ+ +K R ++HRDL N + +K+ D +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL +P++V G +D + + E C + L++H + A++ + Q
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICR---RRSLLELH----KRRKAVTEPEARYFMRQ 134
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
G++YL + ++HRDL N + + +KI D +
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 172
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLES-RDI 75
T D + + EY G+L L S++ F +I S + YL S +++
Sbjct: 78 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHSEKNV 130
Query: 76 VHRDLAARNCMVGKNYTIKISDHAM 100
V+RDL N M+ K+ IKI+D +
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLES-RDI 75
T D + + EY G+L L S++ F +I S + YL S +++
Sbjct: 221 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHSEKNV 273
Query: 76 VHRDLAARNCMVGKNYTIKISDHAM 100
V+RDL N M+ K+ IKI+D +
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLES-RDI 75
T D + + EY G+L L S++ F +I S + YL S +++
Sbjct: 79 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHSEKNV 131
Query: 76 VHRDLAARNCMVGKNYTIKISDHAM 100
V+RDL N M+ K+ IKI+D +
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 17 STEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLES-RDI 75
T D + + EY G+L L S++ F +I S + YL S +++
Sbjct: 80 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHSEKNV 132
Query: 76 VHRDLAARNCMVGKNYTIKISDHAM 100
V+RDL N M+ K+ IKI+D +
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL +P++V G +D + + E C + L++H + A++ + Q
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICR---RRSLLELH----KRRKAVTEPEARYFMRQ 150
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
G++YL + ++HRDL N + + +KI D +
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMAT 61
+K N +I + + P T++E F D+ +++ + N + + + + ++
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+K+L S I+HRDL N +V + T+KI D +
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
+ +Y E G L +L + ++ +I +A ASG+ +L I
Sbjct: 105 VSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 156
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVG-KNYTI- 134
HRDL ++N +V KN T I+D + H + +DT P N VG K Y
Sbjct: 157 HRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAP-----NHRVGTKRYMAP 207
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC 194
++ D ++ H+ES ++D+++ + WEI C
Sbjct: 208 EVLDDSINMKHFES--------------------------FKRADIYAMGLVFWEIARRC 241
Query: 195 N--------QRPYAELT-NEQVIENCSHWYQNNSKQQYLP-RPATCQ--KEIFDLMLECW 242
+ Q PY +L ++ +E + +P R +C+ + + +M ECW
Sbjct: 242 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 301
Query: 243 KTNETDR 249
N R
Sbjct: 302 YANGAAR 308
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL +P++V G +D + + E C + L++H + A++ + Q
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICR---RRSLLELH----KRRKAVTEPEARYFMRQ 150
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
G++YL + ++HRDL N + + +KI D +
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL +P++V G +D + + E C + L++H + A++ + Q
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICR---RRSLLELH----KRRKAVTEPEARYFMRQ 150
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
G++YL + ++HRDL N + + +KI D +
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 51/206 (24%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L PN++++ + + E G+L + + S+ + A+ + Q+
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQV 130
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWM 123
SG YL +IVHRDL N ++ ++K+R
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLL-------------------------ESKSR------ 159
Query: 124 ANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSF 183
+ IKI D + +H+E K RL + +L K K DVWS
Sbjct: 160 -------DALIKIVDFGL-SAHFEVG---GKMKERLGTAYYIAPEVLRKKYDEKCDVWSC 208
Query: 184 AVTLWEILIHCNQRPYAELTNEQVIE 209
V L+ +L C P+ T++++++
Sbjct: 209 GVILYILL--CGYPPFGGQTDQEILK 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
+ P+++++ V ST I + EY G+L ++ C +N + + QI
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI----C---KNGRLDEKESRRLFQQI 125
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
SG+ Y +VHRDL N ++ + KI+D +
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 162
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 79 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 46/184 (25%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
NLV ++G S D + + Y G L L + P +S+ +A A+G+
Sbjct: 82 NLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT----PPLSWHXRCKIAQGAANGI 137
Query: 68 KYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCM 127
+L +HRD+ + N ++ + +T KI SD+ L+ + + +
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKI-----------SDFGLARASEKFAQXVXXSRI 186
Query: 128 VGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTL 187
VG + A E+ L G+ T KSD++SF V L
Sbjct: 187 VGTT------------------------------AYXAPEA-LRGEITPKSDIYSFGVVL 215
Query: 188 WEIL 191
EI+
Sbjct: 216 LEII 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 90 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 86 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
+ +Y E G L +L + ++ +I +A ASG+ +L I
Sbjct: 85 VSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 136
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVG-KNYTI- 134
HRDL ++N +V KN T I+D + H + +DT P N VG K Y
Sbjct: 137 HRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAP-----NHRVGTKRYMAP 187
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC 194
++ D ++ H+ES ++D+++ + WEI C
Sbjct: 188 EVLDDSINMKHFES--------------------------FKRADIYAMGLVFWEIARRC 221
Query: 195 N--------QRPYAELT-NEQVIENCSHWYQNNSKQQYLP-RPATCQ--KEIFDLMLECW 242
+ Q PY +L ++ +E + +P R +C+ + + +M ECW
Sbjct: 222 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 281
Query: 243 KTNETDR 249
N R
Sbjct: 282 YANGAAR 288
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
+ +Y E G L +L + ++ +I +A ASG+ +L I
Sbjct: 82 VSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 133
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVG-KNYTI- 134
HRDL ++N +V KN T I+D + H + +DT P N VG K Y
Sbjct: 134 HRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAP-----NHRVGTKRYMAP 184
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC 194
++ D ++ H+ES ++D+++ + WEI C
Sbjct: 185 EVLDDSINMKHFES--------------------------FKRADIYAMGLVFWEIARRC 218
Query: 195 N--------QRPYAELT-NEQVIENCSHWYQNNSKQQYLP-RPATCQ--KEIFDLMLECW 242
+ Q PY +L ++ +E + +P R +C+ + + +M ECW
Sbjct: 219 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 278
Query: 243 KTNETDR 249
N R
Sbjct: 279 YANGAAR 285
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ N V+ + + EYCE L + N N Q + Y L QI
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD---EYWRLF---RQI 125
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ Y+ S+ I+HR+L N + ++ +KI D +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGL 162
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+IG+ + P +++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 87 IIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 143
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
+ +Y E G L +L + ++ +I +A ASG+ +L I
Sbjct: 79 VSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVG-KNYTI- 134
HRDL ++N +V KN T I+D + H + +DT P N VG K Y
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAP-----NHRVGTKRYMAP 181
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC 194
++ D ++ H+ES ++D+++ + WEI C
Sbjct: 182 EVLDDSINMKHFES--------------------------FKRADIYAMGLVFWEIARRC 215
Query: 195 N--------QRPYAELT-NEQVIENCSHWYQNNSKQQYLP-RPATCQ--KEIFDLMLECW 242
+ Q PY +L ++ +E + +P R +C+ + + +M ECW
Sbjct: 216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 275
Query: 243 KTNETDR 249
N R
Sbjct: 276 YANGAAR 282
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
+ +Y E G L +L + ++ +I +A ASG+ +L I
Sbjct: 80 VSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 131
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVG-KNYTI- 134
HRDL ++N +V KN T I+D + H + +DT P N VG K Y
Sbjct: 132 HRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAP-----NHRVGTKRYMAP 182
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC 194
++ D ++ H+ES ++D+++ + WEI C
Sbjct: 183 EVLDDSINMKHFES--------------------------FKRADIYAMGLVFWEIARRC 216
Query: 195 N--------QRPYAELT-NEQVIENCSHWYQNNSKQQYLP-RPATCQ--KEIFDLMLECW 242
+ Q PY +L ++ +E + +P R +C+ + + +M ECW
Sbjct: 217 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 276
Query: 243 KTNETDR 249
N R
Sbjct: 277 YANGAAR 283
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 57/243 (23%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGC---LIFMATQIASGMKYLESRDIVHRDLA 81
I +Y E G L +L+ +++ ++Y L + T+I S I HRDL
Sbjct: 113 ITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQG---KPAIAHRDLK 169
Query: 82 ARNCMVGKNYTIKISDHAMYCSHYESDYYLSDT-KARLPIRWMANCMVG-KNYT-IKISD 138
++N +V KN T I+D + ++SDT + +P N VG K Y ++ D
Sbjct: 170 SKNILVKKNGTCCIADLGLAVK------FISDTNEVDIP----PNTRVGTKRYMPPEVLD 219
Query: 139 HAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHC---- 194
++ +H++S Y + +D++SF + LWE+ C
Sbjct: 220 ESLNRNHFQS-YIM-------------------------ADMYSFGLILWEVARRCVSGG 253
Query: 195 ----NQRPYAELT-NEQVIENCSHWYQNNSKQQYLPR---PATCQKEIFDLMLECWKTNE 246
Q PY +L ++ E+ + P C +++ LM ECW N
Sbjct: 254 IVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNP 313
Query: 247 TDR 249
R
Sbjct: 314 ASR 316
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMAT 61
LK N +I + + P T++E F D+ +++ + N + + + + + ++
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIHMELDHERMSYLLY 133
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM---YCSHYESDYYLSDTKARL 118
Q+ G+K+L S I+HRDL N +V + T+KI D + C+++ Y+ R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRA 193
Query: 119 PIRWMANCMVGKNYTIKISDHAMYC 143
P ++G Y + ++ C
Sbjct: 194 P-----EVILGMGYAANVDIWSVGC 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ S PN+V+++ E+ + + E+C G + + E P ++ + +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-----ELERP-LTESQIQVVC 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPI 120
Q + YL I+HRDL A N + + IK++D + + + D+ P
Sbjct: 115 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY 174
Query: 121 RWMANCMV 128
WMA +V
Sbjct: 175 -WMAPEVV 181
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGL 187
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL+ PN+VR V T ++ I EY G+L + CN+ S F Q
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI----CNAGR---FSEDEARFFFQQ 124
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
+ SG+ Y S I HRDL N ++
Sbjct: 125 LLSGVSYCHSMQICHRDLKLENTLL 149
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ LK N+V + + TE ++ + EY + DL +L +C + N + +F+
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLD--DCGNIIN---MHNVKLFLF 107
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+ Y + ++HRDL +N ++ + +K++D +
Sbjct: 108 -QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGL 146
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL+ PN+VR V T ++ + EY G+L F +I CN+ S F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERI--CNAGR---FSEDEARFFFQQ 123
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRW 122
+ SG+ Y + + HRDL N ++ + ++ A S + + P
Sbjct: 124 LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYI 183
Query: 123 MANCMVGKNYTIKISD 138
++ K Y K++D
Sbjct: 184 APEVLLKKEYDGKVAD 199
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL+ PN+VR V T ++ + EY G+L F +I CN+ S F Q
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERI--CNAGR---FSEDEARFFFQQ 122
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
+ SG+ Y + + HRDL N ++
Sbjct: 123 LISGVSYCHAMQVCHRDLKLENTLL 147
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMAT 61
LK N +I + + P T++E F D+ +++ + N + + + + + ++
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIHMELDHERMSYLLY 131
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ G+K+L S I+HRDL N +V + T+KI D +
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ + P +V++ TE + I ++ GDL T L ++E+ + F
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-------VKFYL 132
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++A + +L S I++RDL N ++ + IK++D +
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 172
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 79 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL+ PN+VR V T ++ + EY G+L F +I CN+ S F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERI--CNAGR---FSEDEARFFFQQ 123
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
+ SG+ Y + + HRDL N ++
Sbjct: 124 LISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 3 SLKDPNLVRVIGV----CSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIF 58
+K N+++ IG S + + I + E G LS FL+ + +S+ L
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--------VVSWNELCH 125
Query: 59 MATQIASGMKYLES-----RD-----IVHRDLAARNCMVGKNYTIKISDHAMYCSHYESD 108
+A +A G+ YL +D I HRD+ ++N ++ N T I+D + +E+
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK-FEAG 184
Query: 109 YYLSDTKARLPIR 121
DT ++ R
Sbjct: 185 KSAGDTHGQVGTR 197
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 78 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L PN+V +I V +E ++ + E+ E DL L + Q++ Y Q
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIY------LYQ 127
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ G+ + I+HRDL +N ++ + +K++D +
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 79 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL+ PN+VR V T ++ + EY G+L F +I CN+ S F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERI--CNAGR---FSEDEARFFFQQ 123
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
+ SG+ Y + + HRDL N ++
Sbjct: 124 LISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 84 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 140
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ + P +V++ TE + I ++ GDL T L ++E+ + F
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-------VKFYL 133
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++A + +L S I++RDL N ++ + IK++D +
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 85 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L PN+V +I V +E ++ + E+ E DL L + Q++ Y Q
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIY------LYQ 127
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ G+ + I+HRDL +N ++ + +K++D +
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 86 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ + P +V++ TE + I ++ GDL T L ++E+ + F
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-------VKFYL 132
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++A + +L S I++RDL N ++ + IK++D +
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 172
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 86 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
I Y E G L +LQ+ ++ CL + + IASG+ +L I
Sbjct: 113 ITHYHEMGSLYDYLQLTTLDT-------VSCLRIVLS-IASGLAHLHIEIFGTQGKPAIA 164
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL ++N +V KN I+D + H +S L VG N +
Sbjct: 165 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD---------------VGNNPRVG- 208
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEI------ 190
Y + L +T I+ ++S + D+W+F + LWE+
Sbjct: 209 ------TKRYMAPEVLDET-----IQVDCFDSY------KRVDIWAFGLVLWEVARRMVS 251
Query: 191 --LIHCNQRPYAELT-NEQVIEN-----CSHWYQNNSKQQYLPRPATCQKEIFDLMLECW 242
++ + P+ ++ N+ E+ C + N ++ P + LM ECW
Sbjct: 252 NGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT--SLAKLMKECW 309
Query: 243 KTNETDR 249
N + R
Sbjct: 310 YQNPSAR 316
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + IK++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 44/148 (29%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
Q+ SG YL +IVHRDL N ++ ++K+R
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLL-------------------------ESKSR---- 142
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVW 181
+ IKI D + +H+E K RL + +L K K DVW
Sbjct: 143 ---------DALIKIVDFGL-SAHFEVG---GKMKERLGTAYYIAPEVLRKKYDEKCDVW 189
Query: 182 SFAVTLWEILIHCNQRPYAELTNEQVIE 209
S V L+ +L C P+ T++++++
Sbjct: 190 SCGVILYILL--CGYPPFGGQTDQEILK 215
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 123 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKAR 117
++ Q+ +KYL S ++HRD+ N ++ +K++D + +++
Sbjct: 113 YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGL-------------SRSF 159
Query: 118 LPIRWMANCMVGKNYTIKISDHAMYCSHYESDY-YLSDTKARLPIRWMAWESLLLG--KN 174
+ IR + N N + I+++ +++ D L+D A RW +LLG K
Sbjct: 160 VNIRRVTN-----NIPLSINENT---ENFDDDQPILTDYVA---TRWYRAPEILLGSTKY 208
Query: 175 TTKSDVWSFAVTLWEIL 191
T D+WS L EIL
Sbjct: 209 TKGIDMWSLGCILGEIL 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
I Y E G L +LQ+ ++ CL + + IASG+ +L I
Sbjct: 84 ITHYHEMGSLYDYLQLTTLDT-------VSCLRIVLS-IASGLAHLHIEIFGTQGKPAIA 135
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL ++N +V KN I+D + H +S L VG N +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD---------------VGNNPRVG- 179
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEI------ 190
Y + L +T I+ ++S + D+W+F + LWE+
Sbjct: 180 ------TKRYMAPEVLDET-----IQVDCFDSY------KRVDIWAFGLVLWEVARRMVS 222
Query: 191 --LIHCNQRPYAELT-NEQVIEN-----CSHWYQNNSKQQYLPRPATCQKEIFDLMLECW 242
++ + P+ ++ N+ E+ C + N ++ P + LM ECW
Sbjct: 223 NGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT--SLAKLMKECW 280
Query: 243 KTNETDR 249
N + R
Sbjct: 281 YQNPSAR 287
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 65/247 (26%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
I Y E G L +LQ+ ++ CL + + IASG+ +L I
Sbjct: 84 ITHYHEMGSLYDYLQLTTLDT-------VSCLRIVLS-IASGLAHLHIEIFGTQGKPAIA 135
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKI 136
HRDL ++N +V KN I+D + H +S L VG N +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD---------------VGNNPRVG- 179
Query: 137 SDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEI------ 190
Y + L +T I+ ++S + D+W+F + LWE+
Sbjct: 180 ------TKRYMAPEVLDET-----IQVDCFDSY------KRVDIWAFGLVLWEVARRMVS 222
Query: 191 --LIHCNQRPYAELT-NEQVIEN-----CSHWYQNNSKQQYLPRPATCQKEIFDLMLECW 242
++ + P+ ++ N+ E+ C + N ++ P + LM ECW
Sbjct: 223 NGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT--SLAKLMKECW 280
Query: 243 KTNETDR 249
N + R
Sbjct: 281 YQNPSAR 287
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L+ P+++++ V +T I + EY G+L ++ +++ G F QI
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDE-----GRRFF--QQI 117
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++Y IVHRDL N ++ N +KI+D +
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGL 154
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + I+++D +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGL 187
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L P +V + G ++ E E G L ++ C ++ ++ Q
Sbjct: 122 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-------ALYYLGQ 174
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYC 102
G++YL SR I+H D+ A N ++ + HA C
Sbjct: 175 ALEGLEYLHSRRILHGDVKADNVLLSSD-----GSHAALC 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P LV++ + + EY GD+ + L+ S+ + F A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHAR-------FYAAQIVLT 153
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+YL S D+++RDL N ++ + IK++D
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P LV++ + + EY GD+ + L+ S+ + F A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHAR-------FYAAQIVLT 153
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+YL S D+++RDL N ++ + IK++D
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 12 VIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQE--NPAISYGCLIFMATQIASGMKY 69
+I + + P T++E F D+ +++ + N + + + + ++ Q+ G+K+
Sbjct: 123 IISLLNVFTPQKTLEE---FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
L S I+HRDL N +V + T+KI D +
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
E+C+ G L +++ + + + + QI G+ Y+ S+ ++HRDL N
Sbjct: 114 EFCDKGTLEQWIE-----KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 87 VGKNYTIKISDHAMYCS 103
+ +KI D + S
Sbjct: 169 LVDTKQVKIGDFGLVTS 185
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L P +V + G ++ E E G L ++ C ++ ++ Q
Sbjct: 141 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-------ALYYLGQ 193
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYC 102
G++YL SR I+H D+ A N ++ + HA C
Sbjct: 194 ALEGLEYLHSRRILHGDVKADNVLLSSD-----GSHAALC 228
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
+ P+++++ V ST + EY G+L ++ H +E A + QI
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEARR------LFQQI 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S + Y +VHRDL N ++ + KI+D +
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 157
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
+ P+++++ V ST + EY G+L ++ H +E A + QI
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEARR------LFQQI 120
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
S + Y +VHRDL N ++ + KI+D +
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 157
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ S PN+V+++ E+ + + E+C G + + E P ++ + +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-----ELERP-LTESQIQVVC 141
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q + YL I+HRDL A N + + IK++D +
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ S PN+V+++ E+ + + E+C G + + E P ++ + +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-----ELERP-LTESQIQVVC 141
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q + YL I+HRDL A N + + IK++D +
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 43/129 (33%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
+I G+ YL S +HRD+ A N ++ + +K++D + L+DT+ +
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQ-------LTDTQIK---- 172
Query: 122 WMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVW 181
N VG + WMA E + K+D+W
Sbjct: 173 --RNXFVGTPF------------------------------WMAPEVIKQSAYDFKADIW 200
Query: 182 SFAVTLWEI 190
S +T E+
Sbjct: 201 SLGITAIEL 209
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ S PN+V+++ E+ + + E+C G + + E P ++ + +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-----ELERP-LTESQIQVVC 141
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q + YL I+HRDL A N + + IK++D +
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + IK++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 188
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + IK++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGL 170
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N M+ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGF 187
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V+++G + + + E+C G + + + E P I C Q+
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVC-----RQMLEA 121
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYES 107
+ +L S+ I+HRDL A N ++ I+++D + + ++
Sbjct: 122 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 162
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 30/130 (23%)
Query: 4 LKDPNLVRVIGVCSTEDPIST-----IQEYCEFGDLSTFLQIHNCNSQENPAISYGC--- 55
LK N ++ + + E+ +T I E+C G L T L E P+ +YG
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL--------EEPSNAYGLPES 112
Query: 56 -LIFMATQIASGMKYLESRDIVHRDLAARNCM--VGKN----YTI-------KISDHAMY 101
+ + + GM +L IVHR++ N M +G++ Y + ++ D +
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 102 CSHYESDYYL 111
S Y ++ YL
Sbjct: 173 VSLYGTEEYL 182
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 46/187 (24%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L PN+++ ++ ++ + E + GDLS ++ ++ I + Q+
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK---KQKRLIPERTVWKYFVQL 145
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWM 123
S ++++ SR ++HRD+ N + +K+ D + ++ S T A
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL------GRFFSSKTTA------- 192
Query: 124 ANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSF 183
A+ +VG Y +M+ E + KSD+WS
Sbjct: 193 AHSLVGTPY------------------------------YMSPERIHENGYNFKSDIWSL 222
Query: 184 AVTLWEI 190
L+E+
Sbjct: 223 GCLLYEM 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 94/261 (36%), Gaps = 61/261 (23%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 135
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 180
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 181 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 209
Query: 185 VTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKT 244
++L E+ + + P + I + N + LP E D + +C
Sbjct: 210 LSLVEMAV--GRYPIGSGSGSMAIFELLDYIVNEPPPK-LP-SGVFSLEFQDFVNKCLIK 265
Query: 245 NETDRPRFSE--IHLFLQRKN 263
N +R + +H F++R +
Sbjct: 266 NPAERADLKQLMVHAFIKRSD 286
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V+++G + + + E+C G + + + E P I C Q+
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVC-----RQMLEA 129
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
+ +L S+ I+HRDL A N ++ I+++D
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLAD 160
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 170
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVG-----KNYTIKISDHAMYCSHYESDY 109
++ +A Q+ S M+Y+ S+++++RD+ N ++G K + I I D + +Y
Sbjct: 98 TVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGL-----AKEY 152
Query: 110 YLSDTKARLPIR 121
+TK +P R
Sbjct: 153 IDPETKKHIPYR 164
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ P LV + E+ + + + GDL LQ N + +E + C + MA
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFICELVMA 127
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
+ YL+++ I+HRD+ N ++ ++ + I+D
Sbjct: 128 ------LDYLQNQRIIHRDMKPDNILLDEHGHVHITD 158
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 174
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 174
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 170
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 163 WMAWESLLLGKNTTK---SDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNS 219
W+A E+L T +D WSFAV LWE++ + P+A+L+N ++ +
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELV--TREVPFADLSNXEIGXKV-------A 224
Query: 220 KQQYLPR-PATCQKEIFDLMLECWKTNETDRPRFSEIHLFLQR 261
+ P P + L C + RP+F I L++
Sbjct: 225 LEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 190
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGL 190
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 96/264 (36%), Gaps = 71/264 (26%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 119
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +L I MAN
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------------SGQL-IDEMAN 164
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 165 EFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 193
Query: 185 VTLWEILIHCNQRP---YAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLEC 241
++L E+ + RP EL + Y N LP A E D + +C
Sbjct: 194 LSLVEMAVGRYPRPPMAIFELLD----------YIVNEPPPKLPS-AVFSLEFQDFVNKC 242
Query: 242 WKTNETDRPRFSE--IHLFLQRKN 263
N +R + +H F++R +
Sbjct: 243 LIKNPAERADLKQLMVHAFIKRSD 266
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 57/157 (36%), Gaps = 38/157 (24%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIH------------------- 41
M L PN+ R+ V E I + E C G L L +
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 42 --NCNSQENPAISYG---CLIFMAT---------QIASGMKYLESRDIVHRDLAARNCM- 86
CN + +G L F+ QI S + YL ++ I HRD+ N +
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 87 -VGKNYTIKISDHAMYCSHYE---SDYYLSDTKARLP 119
K++ IK+ D + Y+ +YY TKA P
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTP 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 53/187 (28%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ E I L ++ + G
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------EAKRIPEEILGKVSIAVLRG 126
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 171
Query: 126 CMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAV 185
VG +MA E L + +SD+WS +
Sbjct: 172 SFVGTR------------------------------SYMAPERLQGTHYSVQSDIWSMGL 201
Query: 186 TLWEILI 192
+L E+ +
Sbjct: 202 SLVELAV 208
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P ++ + V I I EY G++ + C + +S +I + QI G
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSL-----CLPELAEMVSENDVIRLIKQILEG 143
Query: 67 MKYLESRDIVHRDLAARNCMVGKNY---TIKISDHAM 100
+ YL +IVH DL +N ++ Y IKI D M
Sbjct: 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 4 LKDPNLVRVIGVCSTEDP--ISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMAT 61
L+ N+++++ V E+ + + EYC G + A Y C
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC------ 116
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKIS 96
Q+ G++YL S+ IVH+D+ N ++ T+KIS
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGL 172
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 131 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 173
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 138 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 138 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 140 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 182
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 132 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGF 174
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 51 ISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGK-----NYTIKISDHAMYCSHY 105
S ++ +A Q+ S M+Y+ S+++++RD+ N ++G+ I I D A+
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL----- 156
Query: 106 ESDYYLSDTKARLPIR 121
+Y +TK +P R
Sbjct: 157 AKEYIDPETKKHIPYR 172
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 91/259 (35%), Gaps = 65/259 (25%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESR--------DIV 76
I Y E G L FLQ P ++ + +A A G+ +L I
Sbjct: 84 ITHYHEHGSLYDFLQRQTLE----PHLA----LRLAVSAACGLAHLHVEIFGTQGKPAIA 135
Query: 77 HRDLAARNCMVGKNYTIKISDHAMYCSHYE-SDYYLSDTKARLPI-RWMANCMVGKNYTI 134
HRD +RN +V N I+D + H + SDY R+ R+MA
Sbjct: 136 HRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP--------- 186
Query: 135 KISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEIL--- 191
++ D + +ES +W +D+W+F + LWEI
Sbjct: 187 EVLDEQIRTDCFES------------YKW--------------TDIWAFGLVLWEIARRT 220
Query: 192 ----IHCNQRP--YAELTNEQVIENCSHWYQNNSKQQYLPRPATCQ---KEIFDLMLECW 242
I + RP Y + N+ E+ + + +P + +M ECW
Sbjct: 221 IVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECW 280
Query: 243 KTNETDRPRFSEIHLFLQR 261
N + R I LQ+
Sbjct: 281 YPNPSARLTALRIKKTLQK 299
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 176
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 167
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|B Chain B, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|C Chain C, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|D Chain D, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|E Chain E, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|F Chain F, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs
Length = 917
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 334 IKVQLYFKARWILLSEVTFDSITSQSPDTVTYVGVIAGMFAMILLVLGCTVLFLVRRGRK 393
++ Q+ F+ L+E FD+ SP V VG+ A + + + G V+ +RR R
Sbjct: 795 LREQVRFQDATRQLAEAGFDAFVEVSPHPVLTVGIEATLDSALPADAGACVVGTLRRDRG 854
Query: 394 KVALLHKHSALMNGSAPGVTMN 415
+A H+AL A GV ++
Sbjct: 855 GLADF--HTALGEAYAQGVEVD 874
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 51 ISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGK-----NYTIKISDHAMYCSHY 105
S ++ +A Q+ S M+Y+ S+++++RD+ N ++G+ I I D A+
Sbjct: 123 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL----- 177
Query: 106 ESDYYLSDTKARLPIR 121
+Y +TK +P R
Sbjct: 178 AKEYIDPETKKHIPYR 193
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 26/39 (66%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++ G++YL +HRD+ A N ++G++ +++I+D +
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 167
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 178
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYESDYYLSD 113
Q+ SG+ Y+ IVHRDL N ++ K+ I+I D + +H+E+ + D
Sbjct: 140 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 193
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+ QI G+KY+ S +++HRDL N ++ +KI D +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 190
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 52 SYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS 103
+G + + QIA +++L S+ ++HRDL N + +K+ D + +
Sbjct: 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN++R +T+ + E C +L ++ N + + I + QIASG
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 67 MKYLESRDIVHRDLAARNCMV-------------GKNYTIKISDHAMYCSHYES 107
+ +L S I+HRDL +N +V +N I ISD + C +S
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-CKKLDS 180
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN++R +T+ + E C +L ++ N + + I + QIASG
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 67 MKYLESRDIVHRDLAARNCMV 87
+ +L S I+HRDL +N +V
Sbjct: 146 VAHLHSLKIIHRDLKPQNILV 166
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN++R +T+ + E C +L ++ N + + I + QIASG
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 67 MKYLESRDIVHRDLAARNCMV-------------GKNYTIKISDHAMYCSHYES 107
+ +L S I+HRDL +N +V +N I ISD + C +S
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-CKKLDS 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 26/39 (66%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
++ G++YL +HRD+ A N ++G++ +++I+D +
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 162
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN++R +T+ + E C +L ++ N + + I + QIASG
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 67 MKYLESRDIVHRDLAARNCMV-------------GKNYTIKISDHAMYCSHYES 107
+ +L S I+HRDL +N +V +N I ISD + C +S
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-CKKLDS 180
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYESDYYLSD 113
Q+ SG+ Y+ IVHRDL N ++ K+ I+I D + +H+E+ + D
Sbjct: 134 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 187
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 26 QEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ--------IASGMKYLESRDIVH 77
++ +F +L L+I + + ++ + IF+ Q + G K++ I+H
Sbjct: 99 EDLLKFDELYIVLEIADSDLKK----LFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIH 154
Query: 78 RDLAARNCMVGKNYTIKISDHAM 100
RDL NC++ ++ ++KI D +
Sbjct: 155 RDLKPANCLLNQDCSVKICDFGL 177
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 4 LKDPNLVRVIGVCSTEDPIST-----IQEYCEFGDLSTFLQIHNCNSQENPAISYGC--- 55
LK N ++ + + E+ +T I E+C G L T L E P+ +YG
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL--------EEPSNAYGLPES 112
Query: 56 -LIFMATQIASGMKYLESRDIVHRDLAARNCM 86
+ + + GM +L IVHR++ N M
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 25 IQEYCEFGDLSTFLQIHNCNSQENPAISYGC---LIFMATQIASGMKYLESRDIVHRDLA 81
+ EY G L +L +H + + +++ L ++ T++ G Y + I HRDL
Sbjct: 90 VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA--ISHRDLN 147
Query: 82 ARNCMVGKNYTIKISDHAM 100
+RN +V + T ISD +
Sbjct: 148 SRNVLVKNDGTCVISDFGL 166
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYESDYYLSD 113
Q+ SG+ Y+ IVHRDL N ++ K+ I+I D + +H+E+ + D
Sbjct: 157 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYESDYYLSD 113
Q+ SG+ Y+ IVHRDL N ++ K+ I+I D + +H+E+ + D
Sbjct: 158 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 211
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYC 102
+ + +L + +IVHRDL N ++ N I++SD C
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC 248
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 58 FMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
F A QI +YL S D+++RDL N ++ + I+++D
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGF 187
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L+ NLV ++ VC + + E+ + L N + Y + Q
Sbjct: 80 QLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-------GLDYQVVQKYLFQ 132
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
I +G+ + S +I+HRD+ N +V ++ +K+ D
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCD 167
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN++++ + T IS + E G+L + S+ + A +
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA-------V 154
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGK---NYTIKISDHAM 100
QI + YL IVHRDL N + + +KI+D +
Sbjct: 155 KQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGL 197
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L PN++ ++ + IS + ++ E DL ++ ++ + +Y + M
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAY---MLMT 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS 103
Q G++YL I+HRDL N ++ +N +K++D + S
Sbjct: 122 LQ---GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK N+V +I +C T+ ++ C+ S +L C +S + F ++I
Sbjct: 73 LKHENVVNLIEICRTK---ASPYNRCKG---SIYLVFDFCEHDLAGLLSNVLVKFTLSEI 126
Query: 64 A-------SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+G+ Y+ I+HRD+ A N ++ ++ +K++D +
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 170
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK N+V +I +C T+ ++ C+ S +L C +S + F ++I
Sbjct: 74 LKHENVVNLIEICRTK---ASPYNRCK---ASIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 64 A-------SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+G+ Y+ I+HRD+ A N ++ ++ +K++D +
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 55 CLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHY--ESDYYLS 112
++ +A Q+ + M+Y+ ++ +++RD+ N +VG+ T + HA++ + +Y
Sbjct: 101 TVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKR--QHAIHIIDFGLAKEYIDP 158
Query: 113 DTKARLPIR 121
+TK +P R
Sbjct: 159 ETKKHIPYR 167
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK N+V +I +C T+ ++ C+ S +L C +S + F ++I
Sbjct: 74 LKHENVVNLIEICRTK---ASPYNRCKG---SIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 64 A-------SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+G+ Y+ I+HRD+ A N ++ ++ +K++D +
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L P +V + G ++ E E G L ++ C ++ ++ Q
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQ 172
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
G++YL +R I+H D+ A N ++
Sbjct: 173 ALEGLEYLHTRRILHGDVKADNVLL 197
>pdb|4AG4|A Chain A, Crystal Structure Of A Ddr1-Fab Complex
Length = 351
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 314 PKNRTAFNVVVGLKNRVSRFIKVQLYFKARWILLSEVTFDS 354
P+ R V V L RV+RF++ + F W+L SE++F S
Sbjct: 304 PRARA---VSVPLGGRVARFLQCRFLFAGPWLLFSEISFIS 341
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L P +V + G ++ E E G L ++ C ++ ++ Q
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQ 174
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
G++YL +R I+H D+ A N ++
Sbjct: 175 ALEGLEYLHTRRILHGDVKADNVLL 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK N+V +I +C T+ ++ C+ S +L C +S + F ++I
Sbjct: 74 LKHENVVNLIEICRTK---ASPYNRCKG---SIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 64 A-------SGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+G+ Y+ I+HRD+ A N ++ ++ +K++D +
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+F A +I G++ L IV+RDL N ++ + I+ISD +
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL 332
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
L P +V + G ++ E E G L ++ C ++ ++ Q
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQ 158
Query: 63 IASGMKYLESRDIVHRDLAARNCMV 87
G++YL +R I+H D+ A N ++
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLL 183
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
+F A +I G++ L IV+RDL N ++ + I+ISD +
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL 332
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
E+C+ G L +++ + + + + QI G+ Y+ S+ +++RDL N
Sbjct: 100 EFCDKGTLEQWIE-----KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 87 VGKNYTIKISDHAMYCS 103
+ +KI D + S
Sbjct: 155 LVDTKQVKIGDFGLVTS 171
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 76/197 (38%), Gaps = 53/197 (26%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P++V+ G + + EYC G +S +++ N E+ + I +T G
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT----ILQST--LKG 137
Query: 67 MKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANC 126
++YL +HRD+ A N ++ K++D + L+D A+ N
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ-------LTDXMAK------RNX 184
Query: 127 MVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLL-LGKNTTKSDVWSFAV 185
++G + WMA E + +G N +D+WS +
Sbjct: 185 VIGTPF------------------------------WMAPEVIQEIGYNCV-ADIWSLGI 213
Query: 186 TLWEILIHCNQRPYAEL 202
T E+ + PYA++
Sbjct: 214 TAIEMA--EGKPPYADI 228
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 8/144 (5%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL ++V G D + + E C + L++H + A++ + Q
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCR---RRSLLELH----KRRKALTEPEARYYLRQ 125
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRW 122
I G +YL ++HRDL N + ++ +KI D + + E D T P
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL-ATKVEYDGERKKTLCGTPNYI 184
Query: 123 MANCMVGKNYTIKISDHAMYCSHY 146
+ K ++ ++ ++ C Y
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMY 208
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
QI G +YL ++HRDL N + ++ +KI D + + E D T P
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL-ATKVEYDGERKKTLCGTPNY 183
Query: 122 WMANCMVGKNYTIKISDHAMYCSHY 146
+ K ++ ++ ++ C Y
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMY 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL ++V G D + + E C + L++H + A++ + Q
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCR---RRSLLELH----KRRKALTEPEARYYLRQ 123
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
I G +YL ++HRDL N + ++ +KI D +
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 51 ISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGK-----NYTIKISDHAMYCSHY 105
S ++ +A Q+ S M+Y+ S+++++RD+ N ++G+ I I D +
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGL----- 156
Query: 106 ESDYYLSDTKARLPIR 121
+Y +TK +P R
Sbjct: 157 AKEYIDPETKKHIPYR 172
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
PN++ + V + I E G+L FL S+E A S+ QI G
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE-ATSF------IKQILDG 127
Query: 67 MKYLESRDIVHRDLAARNCMV 87
+ YL ++ I H DL N M+
Sbjct: 128 VNYLHTKKIAHFDLKPENIML 148
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIR 121
QI G +YL ++HRDL N + ++ +KI D + + E D T P
Sbjct: 129 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL-ATKVEYDGERKKTLCGTPNY 187
Query: 122 WMANCMVGKNYTIKISDHAMYCSHY 146
+ K ++ ++ ++ C Y
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMY 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 94/266 (35%), Gaps = 65/266 (24%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 116
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 161
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 162 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 190
Query: 185 VTLWEILIHCNQRPYAELTNEQ-----VIENCSHWYQNNSKQQYLPRPATCQKEIFDLML 239
++L E+ + P + + + E Y N LP E D +
Sbjct: 191 LSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLD--YIVNEPPPKLPS-GVFSLEFQDFVN 247
Query: 240 ECWKTNETDRPRFSE--IHLFLQRKN 263
+C N +R + +H F++R +
Sbjct: 248 KCLIKNPAERADLKQLMVHAFIKRSD 273
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 51/172 (29%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ I+ CL + + YL ++ ++HRD
Sbjct: 115 DELWVVMEFLEGGALTDIVTHTRMNEEQ---IATVCL-----SVLRALSYLHNQGVIHRD 166
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDH 139
+ + + ++ + IK+SD +C+ + +P R +VG Y
Sbjct: 167 IKSDSILLTSDGRIKLSDFG-FCAQVSKE---------VPKR---KXLVGTPY------- 206
Query: 140 AMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEIL 191
WMA E + T+ D+WS + + E++
Sbjct: 207 -----------------------WMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
SL ++V G D + + E C + L++H + A++ + Q
Sbjct: 95 SLAHQHVVGFHGFFEDNDFVFVVLELCR---RRSLLELH----KRRKALTEPEARYYLRQ 147
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
I G +YL ++HRDL N + ++ +KI D +
Sbjct: 148 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
QI G +YL ++HRDL N + ++ +KI D +
Sbjct: 149 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAM 100
Q+ SG+ YL +IVHRDL N ++ K+ IKI D +
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL 185
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + + + + I E G+L FL E +++
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTEDEATQFL 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI G+ YL S+ I H DL N M+
Sbjct: 122 KQILDGVHYLHSKRIAHFDLKPENIML 148
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 55 CL-IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
CL IF+ QIA +++L S+ ++HRDL N + +K+ D +
Sbjct: 120 CLHIFL--QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 3 SLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQ 62
LK PNLV ++ V + + + EYC+ L H + + + + + Q
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL------HELDRYQR-GVPEHLVKSITWQ 110
Query: 63 IASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM-YCSHYESDYYLSDTKAR 117
+ + + +HRD+ N ++ K+ IK+ D SDYY + R
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + + + + I E G+L FL E +++
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTEDEATQFL 135
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI G+ YL S+ I H DL N M+
Sbjct: 136 KQILDGVHYLHSKRIAHFDLKPENIML 162
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + + + + I E G+L FL E +++
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTEDEATQFL 114
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI G+ YL S+ I H DL N M+
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIML 141
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 55/188 (29%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 143
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 188
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 189 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 217
Query: 185 VTLWEILI 192
++L E+ +
Sbjct: 218 LSLVEMAV 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 55/188 (29%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 178
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 223
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 224 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 252
Query: 185 VTLWEILI 192
++L E+ +
Sbjct: 253 LSLVEMAV 260
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 17/86 (19%)
Query: 175 TTKSDVWSFAVTLWEILI-----HCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
+ KSD+WS +T+ E+ I P+ +L +QV+E S +
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQL--KQVVEEPSPQLPADK---------- 282
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEI 255
E D +C K N +RP + E+
Sbjct: 283 FSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAMYCSHYES 107
Q+ SG+ Y IVHRDL N ++ K+ I+I D + +H+E+
Sbjct: 134 QVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEA 181
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 30/131 (22%)
Query: 66 GMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
G ++ I+HRDL NC++ ++ ++K+ D + + S+ + N
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART------INSEKDTNIVNDLEEN 194
Query: 126 CMVG---KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWM-AWESLLLGKNTTKS-DV 180
G KN +++ H + RW A E +LL +N TKS D+
Sbjct: 195 EEPGPHNKNLKKQLTSHVV-------------------TRWYRAPELILLQENYTKSIDI 235
Query: 181 WSFAVTLWEIL 191
WS E+L
Sbjct: 236 WSTGCIFAELL 246
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 85 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 137
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 138 LDERDNLKISDFGL 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 85 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 137
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 138 LDERDNLKISDFGL 151
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 85 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 137
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 138 LDERDNLKISDFGL 151
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 85 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 137
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 138 LDERDNLKISDFGL 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 85 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 137
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 138 LDERDNLKISDFGL 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 84 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 136
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 137 LDERDNLKISDFGL 150
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 83 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 135
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 136 LDERDNLKISDFGL 149
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 27 EYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCM 86
EYC G+L F +I P Q+ +G+ YL I HRD+ N +
Sbjct: 85 EYCSGGEL--FDRIEPDIGMPEPDAQR-----FFHQLMAGVVYLHGIGITHRDIKPENLL 137
Query: 87 VGKNYTIKISDHAM 100
+ + +KISD +
Sbjct: 138 LDERDNLKISDFGL 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q+ +G+ YL I HRD+ N ++ + +KISD +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 23/147 (15%)
Query: 124 ANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKN----TTKSD 179
+N ++ ++ IK+ D + +S D R +MA E + + +SD
Sbjct: 155 SNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCR---PYMAPERIDPSASRQGYDVRSD 211
Query: 180 VWSFAVTLWEILIHCNQRPYAELTN-----EQVIENCSHWYQNNSKQQYLPRPATCQKEI 234
VWS +TL+E + + PY + + QV++ N+ ++++ P
Sbjct: 212 VWSLGITLYE--LATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP-------SF 262
Query: 235 FDLMLECWKTNETDRPRFSEI--HLFL 259
+ + C +E+ RP++ E+ H F+
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 17/86 (19%)
Query: 175 TTKSDVWSFAVTLWEILI-----HCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
+ KSD+WS +T+ E+ I P+ +L +QV+E S +
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQL--KQVVEEPSPQLPADK---------- 238
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEI 255
E D +C K N +RP + E+
Sbjct: 239 FSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 55/188 (29%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 116
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 161
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 162 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 190
Query: 185 VTLWEILI 192
++L E+ +
Sbjct: 191 LSLVEMAV 198
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ A+ CL + + L ++ ++HRD
Sbjct: 101 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL-----QALSVLHAQGVIHRD 152
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
+ + + ++ + +K+SD +C+ + P WMA ++ +
Sbjct: 153 IKSDSILLTHDGRVKLSDFG-FCAQVSKEVPRRKXLVGTPY-WMAPELISR 201
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ A+ CL + + L ++ ++HRD
Sbjct: 90 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CL-----AVLQALSVLHAQGVIHRD 141
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
+ + + ++ + +K+SD +C+ + P WMA ++ +
Sbjct: 142 IKSDSILLTHDGRVKLSDFG-FCAQVSKEVPRRKXLVGTPY-WMAPELISR 190
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 55/188 (29%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 116
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 161
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 162 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 190
Query: 185 VTLWEILI 192
++L E+ +
Sbjct: 191 LSLVEMAV 198
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ A+ CL + + L ++ ++HRD
Sbjct: 99 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL-----QALSVLHAQGVIHRD 150
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
+ + + ++ + +K+SD +C+ + P WMA ++ +
Sbjct: 151 IKSDSILLTHDGRVKLSDFG-FCAQVSKEVPRRKXLVGTPY-WMAPELISR 199
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ A+ CL + + L ++ ++HRD
Sbjct: 94 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CL-----AVLQALSVLHAQGVIHRD 145
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
+ + + ++ + +K+SD +C+ + P WMA ++ +
Sbjct: 146 IKSDSILLTHDGRVKLSDFG-FCAQVSKEVPRRKXLVGTPY-WMAPELISR 194
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 55/188 (29%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 116
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 161
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 162 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 190
Query: 185 VTLWEILI 192
++L E+ +
Sbjct: 191 LSLVEMAV 198
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 55/188 (29%)
Query: 7 PNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASG 66
P +V G ++ IS E+ + G L L+ + I L ++ + G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKG 116
Query: 67 MKYL-ESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAN 125
+ YL E I+HRD+ N +V IK+ D + +S MAN
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------MAN 161
Query: 126 CMVG-KNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFA 184
VG ++Y +S + +HY + +SD+WS
Sbjct: 162 SFVGTRSY---MSPERLQGTHY----------------------------SVQSDIWSMG 190
Query: 185 VTLWEILI 192
++L E+ +
Sbjct: 191 LSLVEMAV 198
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L NL+++ +++ I + EY + G+L + + N E ++FM
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE-----LDTILFM- 193
Query: 61 TQIASGMKYLESRDIVHRDLAARN--CMVGKNYTIKISDHAM 100
QI G++++ I+H DL N C+ IKI D +
Sbjct: 194 KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGL 235
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ A+ CL + + L ++ ++HRD
Sbjct: 144 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL-----QALSVLHAQGVIHRD 195
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
+ + + ++ + +K+SD +C+ + P WMA ++ +
Sbjct: 196 IKSDSILLTHDGRVKLSDFG-FCAQVSKEVPRRKXLVGTPY-WMAPELISR 244
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ L+ N++ + V + I EY E DL ++ +NP +S +
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMD-------KNPDVSMRVIKSFL 138
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV-----GKNYTIKISDHAM 100
Q+ +G+ + SR +HRDL +N ++ + +KI D +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAM 100
Q+ SG+ Y+ +IVHRDL N ++ K+ IKI D +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAM 100
Q+ SG+ Y+ +IVHRDL N ++ K+ IKI D +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 20 DPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRD 79
D + + E+ E G L+ + N ++ A+ CL + + L ++ ++HRD
Sbjct: 221 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL-----QALSVLHAQGVIHRD 272
Query: 80 LAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGK 130
+ + + ++ + +K+SD +C+ + P WMA ++ +
Sbjct: 273 IKSDSILLTHDGRVKLSDFG-FCAQVSKEVPRRKXLVGTPY-WMAPELISR 321
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAM 100
Q+ SG+ Y+ +IVHRDL N ++ K+ IKI D +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
L PN++R+ I I EY G+L LQ +C E + + ++
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTAT------IMEEL 132
Query: 64 ASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD 97
A + Y + ++HRD+ N ++G +KI+D
Sbjct: 133 ADALMYCHGKKVIHRDIKPENLLLGLKGELKIAD 166
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 8/102 (7%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L P L+ + + + I E+ G+L + + E I+Y
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY------M 155
Query: 61 TQIASGMKYLESRDIVHRDLAARN--CMVGKNYTIKISDHAM 100
Q G+K++ IVH D+ N C K ++KI D +
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL 197
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 51/168 (30%)
Query: 24 TIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAAR 83
+ E+ + G L+ + N ++ + L +A YL ++ ++HRD+ +
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALA--------YLHAQGVIHRDIKSD 170
Query: 84 NCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYC 143
+ ++ + +K+SD +C+ D +P R +VG Y
Sbjct: 171 SILLTLDGRVKLSDFG-FCAQISKD---------VPKR---KXLVGTPY----------- 206
Query: 144 SHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEIL 191
WMA E + T+ D+WS + + E++
Sbjct: 207 -------------------WMAPEVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 3 SLKDPNLVRV--IGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISY--GCLIF 58
LK PN++ + + + + + + +Y E DL ++ H + + G +
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKS 132
Query: 59 MATQIASGMKYLESRDIVHRDLAARNCMV 87
+ QI G+ YL + ++HRDL N +V
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILV 161
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMV---GKNYTIKISDHAM 100
Q+ S +KYL IVHRDL N + +N I I+D +
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEE------ATEFLK 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 122 -QILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
LK PN+VR+ S E + + G+L + S+ + + C+ QI
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCI----HQI 139
Query: 64 ASGMKYLESRDIVHRDLAARNCMVG---KNYTIKISDHAM 100
+ ++ DIVHRDL N ++ K +K++D +
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGL 179
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N++ + V + I E G+L FL S+E A S+ QI G+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE-ATSF------IKQILDGV 128
Query: 68 KYLESRDIVHRDLAARNCMV 87
YL ++ I H DL N M+
Sbjct: 129 NYLHTKKIAHFDLKPENIML 148
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N++ + V + I E G+L FL S+E A S+ QI G+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE-ATSF------IKQILDGV 128
Query: 68 KYLESRDIVHRDLAARNCMV 87
YL ++ I H DL N M+
Sbjct: 129 NYLHTKKIAHFDLKPENIML 148
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N++ + V + I E G+L FL S+E A S+ QI G+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE-ATSF------IKQILDGV 128
Query: 68 KYLESRDIVHRDLAARNCMV 87
YL ++ I H DL N M+
Sbjct: 129 NYLHTKKIAHFDLKPENIML 148
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFLK 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 122 -QILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFLK 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 122 -QILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMV 87
I + Q SG+ +L S +IVHRDL N ++
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILI 151
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFLK 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 -QILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N++ + V + I E G+L FL S+E A S+ QI G+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE-ATSF------IKQILDGV 128
Query: 68 KYLESRDIVHRDLAARNCMV 87
YL ++ I H DL N M+
Sbjct: 129 NYLHTKKIAHFDLKPENIML 148
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFLK 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 122 -QILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFLK 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 -QILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 17/86 (19%)
Query: 175 TTKSDVWSFAVTLWEILI-----HCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPAT 229
+ KSD+WS +T E+ I P+ +L +QV+E S +
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYDSWGTPFQQL--KQVVEEPSPQLPADK---------- 265
Query: 230 CQKEIFDLMLECWKTNETDRPRFSEI 255
E D +C K N +RP + E+
Sbjct: 266 FSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGM 67
N++ + V + I E G+L FL S+E A S+ QI G+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE-ATSF------IKQILDGV 128
Query: 68 KYLESRDIVHRDLAARNCMV 87
YL ++ I H DL N M+
Sbjct: 129 NYLHTKKIAHFDLKPENIML 148
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-------FL 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-------FL 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 23/33 (69%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVG 88
++ +A Q+ S ++Y+ S++ +HRD+ N ++G
Sbjct: 107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ P LV + ++ + I E+ G+L + + E+ A+ Y
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY------M 155
Query: 61 TQIASGMKYLESRDIVHRDLAARNCM 86
Q+ G+ ++ + VH DL N M
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIM 181
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 23/33 (69%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVG 88
++ +A Q+ S ++Y+ S++ +HRD+ N ++G
Sbjct: 107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFLK 121
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 122 -QILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 23/33 (69%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCMVG 88
++ +A Q+ S ++Y+ S++ +HRD+ N ++G
Sbjct: 105 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 137
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISY---GCLIFMATQIA 64
++VR + +D + EYC G L+ + S+ +SY L + Q+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAI------SENYRIMSYFKEAELKDLLLQVG 121
Query: 65 SGMKYLESRDIVHRDLAARNCMVGK 89
G++Y+ S +VH D+ N + +
Sbjct: 122 RGLRYIHSMSLVHMDIKPSNIFISR 146
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFL- 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-------FL 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAMYCS 103
L +IVHRDL N ++ + IK++D C
Sbjct: 127 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 160
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISY---GCLIFMATQIA 64
++VR + +D + EYC G L+ + S+ +SY L + Q+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAI------SENYRIMSYFKEAELKDLLLQVG 123
Query: 65 SGMKYLESRDIVHRDLAARNCMVGK 89
G++Y+ S +VH D+ N + +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISR 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISY---GCLIFMATQIA 64
++VR + +D + EYC G L+ + S+ +SY L + Q+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAI------SENYRIMSYFKEAELKDLLLQVG 123
Query: 65 SGMKYLESRDIVHRDLAARNCMVGK 89
G++Y+ S +VH D+ N + +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISR 148
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAMYC 102
L +IVHRDL N ++ + IK++D C
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q +K L +++HRDL N ++ N +K+ D +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q +K L +++HRDL N ++ N +K+ D +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 70 LESRDIVHRDLAARNCMVGKNYTIKISDHAMYC 102
L +IVHRDL N ++ + IK++D C
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 8 NLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISY---GCLIFMATQIA 64
++VR + +D + EYC G L+ + S+ +SY L + Q+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAI------SENYRIMSYFKEAELKDLLLQVG 125
Query: 65 SGMKYLESRDIVHRDLAARNCMVGK 89
G++Y+ S +VH D+ N + +
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISR 150
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E F+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE------ATEFL- 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM 100
Q +K L +++HRDL N ++ N +K+ D +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M L+ P LV + ++ + I E+ G+L + + E+ A+ Y
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY------M 261
Query: 61 TQIASGMKYLESRDIVHRDLAARNCM 86
Q+ G+ ++ + VH DL N M
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIM 287
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-------FL 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
+ ++ PN++ + V + + I E G+L FL ++E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-------FL 120
Query: 61 TQIASGMKYLESRDIVHRDLAARNCMV 87
QI +G+ YL S I H DL N M+
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL PN++R+ I + E C G+L + +H +E+ A +
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAAR------IM 112
Query: 61 TQIASGMKYLESRDIVHRDLAARNCM 86
+ S + Y ++ HRDL N +
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFL 138
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMA 60
M SL PN++R+ I + E C G+L + +H +E+ A +
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAAR------IM 129
Query: 61 TQIASGMKYLESRDIVHRDLAARNCM 86
+ S + Y ++ HRDL N +
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFL 155
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
+K PN+V + + + + I + G+L + ++ + + LIF Q+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----RLIF---QV 125
Query: 64 ASGMKYLESRDIVHRDLAARNCM---VGKNYTIKISDHAM 100
+KYL IVHRDL N + + ++ I ISD +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 175 TTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENC 211
+T +D+WS ++ +L N P+ TN+Q+IEN
Sbjct: 181 STATDMWSLGTLVYVLLSGIN--PFLAETNQQIIENI 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
+K PN+V + + + + I + G+L + ++ + + LIF Q+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----RLIF---QV 125
Query: 64 ASGMKYLESRDIVHRDLAARNCM---VGKNYTIKISDHAM 100
+KYL IVHRDL N + + ++ I ISD +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 4 LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQI 63
+K PN+V + + + + I + G+L + ++ + + LIF Q+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----RLIF---QV 125
Query: 64 ASGMKYLESRDIVHRDLAARNCM---VGKNYTIKISDHAM 100
+KYL IVHRDL N + + ++ I ISD +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 56 LIFMATQIASGMKYLESRDIVHRDLAARNCM---VGKNYTIKISDHAM 100
LIF Q+ +KYL IVHRDL N + + ++ I ISD +
Sbjct: 121 LIF---QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|2PEO|A Chain A, Crystal Structure Of Rbcx From Anabaena Ca
pdb|2PEO|B Chain B, Crystal Structure Of Rbcx From Anabaena Ca
pdb|2WVW|I Chain I, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|J Chain J, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|K Chain K, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|L Chain L, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|M Chain M, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|N Chain N, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|O Chain O, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|P Chain P, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|Q Chain Q, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|R Chain R, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|S Chain S, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|T Chain T, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|U Chain U, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|V Chain V, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|W Chain W, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|2WVW|X Chain X, Cryo-Em Structure Of The Rbcl-Rbcx Complex
pdb|3HYB|A Chain A, Crystal Structure Of Rbcx From Anabaena, Crystal Form Ii
pdb|3HYB|B Chain B, Crystal Structure Of Rbcx From Anabaena, Crystal Form Ii
pdb|3RG6|C Chain C, Crystal Structure Of A Chaperone-Bound Assembly
Intermediate Of Form I Rubisco
pdb|3RG6|D Chain D, Crystal Structure Of A Chaperone-Bound Assembly
Intermediate Of Form I Rubisco
pdb|3RG6|E Chain E, Crystal Structure Of A Chaperone-Bound Assembly
Intermediate Of Form I Rubisco
pdb|3RG6|F Chain F, Crystal Structure Of A Chaperone-Bound Assembly
Intermediate Of Form I Rubisco
Length = 155
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 18 TEDPISTIQEYCEFGDLSTFL-QIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIV 76
+D T+Q Y + L T L Q+ + NP ++ F A ++ G KY+E +
Sbjct: 27 AKDTAKTLQSYLTYQALRTVLAQL----GETNPPLALWLHNFSAGKVQDGEKYIEELFLE 82
Query: 77 HRDLAARNCMVGKNYTIKISD 97
DLA R V ++ +I++
Sbjct: 83 KPDLALRIMTVREHIAEEIAE 103
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 57 IFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISD--HAMYCSHYESDYYLSDT 114
IF T A + + I+HRDL N ++ TIK+ D A SHY DY S
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY-PDYSWSAQ 199
Query: 115 KARL 118
+ L
Sbjct: 200 RRAL 203
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 42/148 (28%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM------------YCSH--YES 107
I G+ L +VHRDL N ++ N I I D + Y +H Y +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 108 DYYLSDTKA--RLPIRWMANCMVGKNY-----------------------TIKISDHAMY 142
+ K +L W A C++ + + T KI D M+
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
Query: 143 CSHYESDYYLSDTKARLPIRWMAWESLL 170
S D YL ++ + +P R AW +++
Sbjct: 262 SSPSARD-YLRNSLSNVPAR--AWTAVV 286
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 42/148 (28%)
Query: 62 QIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAM------------YCSH--YES 107
I G+ L +VHRDL N ++ N I I D + Y +H Y +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 108 DYYLSDTKA--RLPIRWMANCMVGKNY-----------------------TIKISDHAMY 142
+ K +L W A C++ + + T KI D M+
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
Query: 143 CSHYESDYYLSDTKARLPIRWMAWESLL 170
S D YL ++ + +P R AW +++
Sbjct: 262 SSPSARD-YLRNSLSNVPAR--AWTAVV 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.134 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,727,765
Number of Sequences: 62578
Number of extensions: 503360
Number of successful extensions: 3290
Number of sequences better than 100.0: 923
Number of HSP's better than 100.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 1116
Number of HSP's gapped (non-prelim): 1335
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)