Diaphorina citri psyllid: psy5690

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----
MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEIHLFLQRKNLGARASKITPVMKRLPLHVFSTVKIFFSMDGSSFQSNMSPIKESPNPEFFPKNRTAFNVVVGLKNRVSRFIKVQLYFKARWILLSEVTFDSITSQSPDTVTYVGVIAGMFAMILLVLGCTVLFLVRRGRKKVALLHKHSALMNGSAPGVTMNMKELQMHMTTPIIKPTNTN
ccccccccEEEEEEEEccccccEEEEEccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccCEEEccccccccccccccEEcccccccccHHcccccccccccEEEccccccccccccccEEccccccccccccHHHHHHccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccccccccccEEECcccccccccccccccccccccccccccccEEEEEEcccccccEEEEccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccccccCEccccccccccccCEcccccc
***LKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEIHLFLQRKNLGARASKI************STVKIFFSM*********************PKNRTAFNVVVGLKNRVSRFIKVQLYFKARWILLSEVTFDSITSQSPDTVTYVGVIAGMFAMILLVLGCTVLFLVRRGRKKV*****************TMNMKELQMHM***********
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MCSLKDPNLVRVIGVCSTEDPISTIQEYCEFGDLSTFLQIHNCNSQENPAISYGCLIFMATQIASGMKYLESRDIVHRDLAARNCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMANCMVGKNYTIKISDHAMYCSHYESDYYLSDTKARLPIRWMAWESLLLGKNTTKSDVWSFAVTLWEILIHCNQRPYAELTNEQVIENCSHWYQNNSKQQYLPRPATCQKEIFDLMLECWKTNETDRPRFSEIHLFLQRKNLGARASKITPVMKRLPLHVFSTVKIFFSMDGSSFQSNMSPIKESPNPEFFPKNRTAFNVVVGLKNRVSRFIKVQLYFKARWILLSEVTFDSITSQSPDTVTYVGVIAGMFAMILLVLGCTVLFLVRRGRKKVALLHKHSALMNGSAPGVTMNMKELQMHMTTPIIKPTNTN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1P4O, chain A
Confidence level:very confident
Coverage over the Query: 1-108,150-262
View the alignment between query and template
View the model in PyMOL
Template: 3RP9, chain A
Confidence level:very confident
Coverage over the Query: 2-119,159-264
View the alignment between query and template
View the model in PyMOL
Template: 4AG4, chain A
Confidence level:confident
Coverage over the Query: 277-357
View the alignment between query and template
View the model in PyMOL
Template: 2KNC, chain B
Confidence level:probable
Coverage over the Query: 367-396
View the alignment between query and template
View the model in PyMOL