Query psy5692
Match_columns 98
No_of_seqs 98 out of 107
Neff 4.0
Searched_HMMs 29240
Date Sat Aug 17 00:13:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmk_A DOWN syndrome cell adhe 98.9 4.6E-10 1.6E-14 90.7 2.1 77 2-79 134-211 (816)
2 2qsq_A Carcinoembryonic antige 98.2 4.2E-06 1.4E-10 55.3 6.6 65 11-80 5-85 (111)
3 2v5m_A Dscam; neurobiology SPL 98.2 1E-06 3.5E-11 64.1 3.7 65 14-79 111-176 (388)
4 2e7b_A Obscurin; IG-like domai 97.9 7.5E-06 2.6E-10 50.5 3.7 54 18-79 19-75 (103)
5 1hng_A CD2; T lymphocyte adhes 97.8 2.6E-05 9E-10 52.9 4.9 60 18-79 7-73 (176)
6 1waa_A Titin; metal binding pr 97.8 1.6E-05 5.5E-10 50.0 3.1 57 14-79 13-72 (93)
7 3q0h_A T cell immunoreceptor w 97.7 4.4E-05 1.5E-09 49.5 4.5 68 18-88 14-90 (117)
8 2eo9_A Roundabout homolog 1; b 97.7 5.4E-05 1.8E-09 47.8 4.7 63 18-88 19-81 (118)
9 3r0n_A Poliovirus receptor-rel 97.7 4.7E-05 1.6E-09 48.7 4.4 62 18-79 13-105 (128)
10 2yuz_A Myosin-binding protein 97.7 2.1E-05 7.2E-10 49.8 2.6 53 18-79 18-73 (100)
11 2edj_A Roundabout homolog 2; K 97.7 3.9E-05 1.3E-09 46.8 3.7 63 18-88 19-81 (100)
12 2e6q_A Obscurin-like protein 1 97.6 2.9E-05 9.9E-10 51.9 3.1 64 11-81 13-86 (112)
13 2edh_A Obscurin; structural ge 97.6 2.8E-05 9.7E-10 48.7 2.6 63 14-88 27-92 (113)
14 2dku_A KIAA1556 protein; beta- 97.6 4.7E-05 1.6E-09 46.8 3.4 54 18-79 19-75 (103)
15 2eny_A Obscurin; beta-sandwich 97.6 1.8E-05 6E-10 50.2 1.3 59 14-79 16-77 (104)
16 2dm7_A KIAA1556 protein; beta- 97.6 2E-05 6.9E-10 48.9 1.5 53 18-79 19-74 (108)
17 4fmk_A Poliovirus receptor-rel 97.6 6.3E-05 2.1E-09 49.4 3.7 69 18-88 12-102 (225)
18 2dlt_A Myosin binding protein 97.5 2.6E-05 9E-10 48.5 1.6 57 14-79 16-75 (106)
19 2lu7_A Obscurin-like protein 1 97.5 9.1E-05 3.1E-09 46.2 4.0 61 18-88 7-70 (84)
20 4hwu_A Fibroblast growth facto 97.5 0.00014 4.8E-09 44.2 4.4 52 18-79 12-63 (95)
21 3m45_A Cell adhesion molecule 97.4 0.00014 4.6E-09 44.2 3.9 69 14-88 14-90 (108)
22 2k1m_A Myosin-binding protein 97.4 4.6E-05 1.6E-09 46.7 1.6 54 18-79 19-75 (95)
23 2kkq_A Myotilin; unknown funct 97.4 0.00028 9.6E-09 45.1 5.3 63 18-88 26-92 (116)
24 1pd6_A Cardiac MYBP-C;, myosin 97.4 0.0001 3.5E-09 46.8 3.0 62 18-88 27-91 (104)
25 3udw_C Poliovirus receptor; PV 97.4 0.00022 7.5E-09 43.7 4.4 62 18-79 11-91 (118)
26 2lvc_A Obscurin-like protein 1 97.4 8.4E-05 2.9E-09 46.9 2.4 60 19-88 18-80 (91)
27 1u2h_A APEG-1, aortic preferen 97.4 0.00013 4.5E-09 44.1 3.0 63 18-88 16-81 (99)
28 1hnf_A CD2; T lymphocyte adhes 97.3 0.0003 1E-08 48.9 5.1 60 18-79 10-78 (182)
29 4frw_A Poliovirus receptor-rel 97.3 0.00012 4.2E-09 47.8 2.8 62 18-79 10-91 (218)
30 2e6p_A Obscurin-like protein 1 97.3 9.2E-05 3.1E-09 45.6 1.9 54 18-79 21-77 (104)
31 1x44_A Myosin-binding protein 97.3 0.00019 6.6E-09 44.3 3.3 56 18-79 18-76 (103)
32 2oyp_A Hepatitis A virus cellu 97.3 0.00039 1.3E-08 42.5 4.5 70 18-89 5-92 (109)
33 2ckn_A Basic fibroblast growth 97.2 0.00026 8.9E-09 43.2 3.5 60 18-88 20-79 (95)
34 3irg_B Obscurin-like protein 1 97.2 0.00014 4.9E-09 44.4 2.1 62 18-88 24-88 (107)
35 2edk_A Myosin-binding protein 97.2 5.5E-05 1.9E-09 46.6 0.2 58 18-79 19-79 (101)
36 4gjt_B Poliovirus receptor-rel 97.2 0.00031 1.1E-08 45.4 3.7 69 18-88 11-99 (123)
37 2if7_A SLAM family member 6; N 97.2 0.0004 1.4E-08 47.3 4.4 60 18-79 9-82 (193)
38 1eaj_A Coxsackie virus and ade 97.2 0.00043 1.5E-08 42.4 4.2 69 18-88 16-108 (126)
39 3r4d_A CEA-related cell adhesi 97.2 0.00068 2.3E-08 44.9 5.4 70 13-88 6-90 (208)
40 2eo1_A OBSCN protein, cDNA FLJ 97.2 0.00012 4.3E-09 44.8 1.4 54 18-79 22-78 (102)
41 2yuv_A Myosin-binding protein 97.2 0.00016 5.4E-09 44.5 1.9 54 18-79 19-75 (100)
42 2edf_A Obscurin; beta-sandwich 97.1 0.00016 5.5E-09 44.4 1.9 54 18-79 19-75 (103)
43 2v44_A NCAM2, neural cell adhe 97.1 0.00028 9.5E-09 46.3 3.1 64 18-88 107-170 (189)
44 2bk8_A Connectin, M1, titin he 97.1 0.00044 1.5E-08 41.9 3.6 55 18-79 12-70 (97)
45 1epf_A NCAM, protein (neural c 97.1 0.00029 1E-08 46.2 2.9 65 18-89 111-175 (191)
46 3knb_A Titin; IG-like, titin, 97.1 0.00028 9.6E-09 44.5 2.7 64 18-88 16-82 (100)
47 2v5t_A NCAM2, N-CAM 2, neural 97.1 0.00033 1.1E-08 45.5 3.0 64 18-88 13-76 (189)
48 3irg_A Titin; IG-like, titin, 97.1 0.00027 9.3E-09 42.3 2.4 64 18-88 16-82 (100)
49 3caf_A Fibroblast growth facto 97.1 0.00049 1.7E-08 41.7 3.5 66 18-88 19-84 (100)
50 2dru_A Chimera of CD48 antigen 97.1 0.00067 2.3E-08 46.4 4.6 60 18-79 10-81 (180)
51 3knb_B Obscurin-like protein 1 97.1 0.00025 8.5E-09 45.5 2.2 65 14-88 21-88 (107)
52 3puc_A Titin; I-SET IG-like do 97.1 0.00033 1.1E-08 42.1 2.6 62 18-88 17-81 (99)
53 2edo_A CD48 antigen; beta-sand 97.1 0.00088 3E-08 43.6 4.8 68 18-89 15-93 (121)
54 3kld_A Contactin 4, axcam, BIG 97.0 0.00059 2E-08 50.6 4.3 57 18-79 113-169 (384)
55 2pet_A Lutheran blood group gl 97.0 0.00024 8.3E-09 47.7 2.0 68 18-89 11-97 (231)
56 3rbg_A Cytotoxic and regulator 97.0 0.00056 1.9E-08 43.8 3.6 59 18-79 12-78 (124)
57 2ptt_A CD48 antigen; CD244, CD 97.0 0.0016 5.6E-08 40.6 5.4 67 18-89 14-93 (110)
58 2iep_A Muscle-specific kinase 97.0 0.00056 1.9E-08 44.7 3.2 63 18-88 18-81 (192)
59 3qp3_A Titin; I-SET IG-like, s 96.9 0.00057 2E-08 41.6 2.9 62 18-88 19-83 (103)
60 2dm2_A Palladin; beta-sandwich 96.9 0.0012 4.2E-08 40.8 4.2 56 18-79 19-78 (110)
61 2cqv_A MLCK, myosin light chai 96.9 0.00047 1.6E-08 43.1 2.2 55 18-79 18-75 (114)
62 2xot_A Amphoterin-induced prot 96.9 0.00078 2.7E-08 50.6 3.8 57 18-79 257-313 (361)
63 3khq_A B-cell antigen receptor 96.9 0.00046 1.6E-08 46.0 2.3 54 18-79 28-89 (133)
64 2cpc_A KIAA0657 protein; immun 96.9 0.00027 9.2E-09 43.9 1.1 54 18-79 24-80 (113)
65 2kdg_A Myotilin; immonoglobuli 96.9 0.0012 4E-08 39.8 3.9 64 18-88 16-81 (100)
66 3r08_E T-cell surface glycopro 96.9 0.00057 2E-08 44.0 2.6 47 18-79 10-57 (82)
67 2cr3_A Basic fibroblast growth 96.8 0.0012 3.9E-08 40.7 3.7 53 18-79 14-66 (99)
68 3kvq_A Vascular endothelial gr 96.8 0.0015 5E-08 39.9 4.0 62 18-88 21-83 (108)
69 1pko_A Myelin oligodendrocyte 96.8 0.00094 3.2E-08 43.2 3.0 62 18-79 17-97 (139)
70 2iep_A Muscle-specific kinase 96.8 0.00086 2.9E-08 43.8 2.8 63 18-89 111-173 (192)
71 3lcy_A Titin; A-BAND, IG tande 96.7 0.0015 5.2E-08 42.4 4.0 62 18-88 18-82 (197)
72 4gos_A V-SET domain-containing 96.7 0.0012 4.2E-08 43.2 3.5 69 19-89 17-104 (125)
73 2v44_A NCAM2, neural cell adhe 96.7 0.00084 2.9E-08 44.0 2.7 62 18-89 13-78 (189)
74 1ncn_A T lymphocyte activation 96.7 0.0037 1.3E-07 38.8 5.6 69 18-89 5-89 (110)
75 3eow_R Poliovirus receptor; im 96.7 0.0015 5.3E-08 44.2 3.9 70 18-89 10-98 (221)
76 3bp6_B Programmed cell death 1 96.7 0.001 3.6E-08 44.3 2.8 59 18-79 13-79 (202)
77 2pkd_A SLAM family member 5; s 96.7 0.0044 1.5E-07 40.4 5.7 68 18-89 10-92 (111)
78 4fa8_A Secreted protein BARF1; 96.7 0.0035 1.2E-07 44.0 5.6 70 13-88 113-185 (203)
79 3noi_A Natural cytotoxicity tr 96.6 0.0013 4.4E-08 42.1 3.0 69 18-88 18-100 (120)
80 2wim_A N-CAM 2, NCAM2, neural 96.6 0.002 6.9E-08 44.7 4.0 64 18-88 109-172 (291)
81 2or8_A Hepatitis A virus cellu 96.6 0.0026 8.8E-08 39.5 4.0 68 18-89 8-93 (116)
82 3ojm_B Fibroblast growth facto 96.6 0.0021 7.2E-08 42.8 3.7 66 18-88 30-95 (231)
83 3laf_A Deleted in colorectal c 96.5 0.0016 5.6E-08 47.2 3.4 75 10-89 25-102 (403)
84 3zyj_A Leucine-rich repeat-con 96.5 0.0011 3.6E-08 50.8 2.4 58 18-79 352-409 (440)
85 3cx2_A Myosin-binding protein 96.5 0.0015 5E-08 40.8 2.5 67 18-88 15-91 (108)
86 3sbw_C Programmed cell death 1 96.5 0.0025 8.6E-08 42.6 3.8 68 18-88 12-99 (222)
87 1ugn_A LIR1, leukocyte immunog 96.5 0.00091 3.1E-08 44.9 1.6 55 18-79 111-169 (198)
88 3so5_A LIG-3, leucine-rich rep 96.5 0.00037 1.3E-08 41.9 -0.3 68 18-88 21-95 (112)
89 3p3y_A Neurofascin; IG domains 96.5 0.0026 8.7E-08 46.1 4.0 56 18-78 127-182 (404)
90 3grw_A Fibroblast growth facto 96.5 0.004 1.4E-07 42.1 4.8 66 18-88 26-91 (241)
91 3s97_C Contactin-1; carbonic a 96.5 0.0018 6E-08 42.3 2.8 67 18-89 19-86 (201)
92 1bih_A Hemolin; insect immunit 96.4 0.0022 7.6E-08 46.4 3.6 73 14-89 108-184 (395)
93 2j8h_A Titin, connectin; cardi 96.4 0.003 1E-07 41.5 3.9 63 18-88 15-81 (197)
94 4i0k_A CD276 antigen; immunogl 96.4 0.003 1E-07 42.3 4.0 70 18-89 6-92 (222)
95 2vr9_A Roundabout 1, ROBO; imm 96.4 0.0038 1.3E-07 41.7 4.4 67 18-88 119-189 (217)
96 2x1w_L Vascular endothelial gr 96.4 0.0013 4.6E-08 44.8 2.2 62 18-88 18-83 (213)
97 3o4o_C Interleukin-1 receptor 96.4 0.001 3.4E-08 47.7 1.6 75 9-88 21-100 (339)
98 1nct_A Titin; cell adhesion, g 96.4 0.00048 1.7E-08 43.3 -0.1 62 18-88 25-89 (106)
99 1qz1_A Neural cell adhesion mo 96.4 0.0018 6.1E-08 44.9 2.8 64 18-88 111-174 (291)
100 1e07_A Carcinoembryonic antige 96.4 0.0038 1.3E-07 49.0 4.9 59 18-79 10-83 (642)
101 1h5b_A Murine T cell receptor 96.4 0.0019 6.5E-08 40.7 2.7 65 18-88 12-90 (113)
102 3to4_D NKT vbeta2 (mouse varia 96.4 0.0049 1.7E-07 43.2 5.0 66 18-88 12-93 (253)
103 3pl6_D MBP peptide / T-cell re 96.4 0.0038 1.3E-07 43.7 4.4 58 18-79 37-112 (268)
104 3zyi_A Leucine-rich repeat-con 96.3 0.0011 3.8E-08 50.9 1.5 57 18-79 363-419 (452)
105 2dm3_A KIAA0992 protein, palla 96.3 0.0018 6.2E-08 39.7 2.2 57 18-79 20-78 (110)
106 3mj6_A Junctional adhesion mol 96.3 0.0039 1.3E-07 42.9 4.1 69 18-88 16-103 (268)
107 1fhg_A Telokin; immunoglobulin 96.3 0.0036 1.2E-07 41.4 3.8 55 18-79 52-110 (154)
108 1dr9_A B7-1 (CD80), T lymphocy 96.3 0.0012 4E-08 44.0 1.4 62 18-79 5-77 (201)
109 2r15_A Myomesin-1; sarcomeric 96.3 0.0035 1.2E-07 41.4 3.7 55 18-79 128-186 (212)
110 2a38_A Titin; Z1Z2, structural 96.3 0.0031 1E-07 41.1 3.3 63 18-89 114-179 (194)
111 2cr6_A KIAA1556 protein, obscu 96.3 0.00085 2.9E-08 42.3 0.6 58 14-79 21-82 (115)
112 1jbj_A CD3 epsilon and gamma e 96.3 0.0048 1.7E-07 41.6 4.3 45 19-78 11-56 (186)
113 2zg1_A Sialic acid-binding IG- 96.3 0.0055 1.9E-07 40.8 4.6 69 18-88 11-101 (214)
114 1z9m_A GAPA225; nectin-like, I 96.2 0.0023 8E-08 41.8 2.5 66 18-88 49-122 (145)
115 1g1c_A Immunoglobulin-like dom 96.2 0.0036 1.2E-07 37.5 3.1 62 18-88 16-81 (99)
116 2va4_A NCAM2, N-CAM 2, neural 96.2 0.0043 1.5E-07 40.2 3.7 62 18-88 15-77 (192)
117 1epf_A NCAM, protein (neural c 96.2 0.0037 1.3E-07 40.8 3.3 64 18-88 13-81 (191)
118 3jz7_A MCAR, CAR, coxsackievir 96.2 0.0061 2.1E-07 39.9 4.4 69 18-88 11-103 (214)
119 2coq_A NEW antigen receptor va 96.2 0.0033 1.1E-07 39.5 2.9 65 18-88 11-85 (108)
120 1ccz_A Protein (CD58); LFA-3, 96.2 0.0035 1.2E-07 42.4 3.2 58 18-79 6-72 (171)
121 1xt5_A Variable region-contain 96.2 0.0013 4.4E-08 41.8 0.9 70 18-89 15-112 (135)
122 2wv3_A Neuroplastin; igcam, me 96.2 0.0049 1.7E-07 40.6 3.7 65 18-88 103-173 (190)
123 2fbo_J V1V2;, variable region- 96.1 0.0016 5.6E-08 44.1 1.4 70 18-89 13-110 (250)
124 1lk3_L 9D7 light chain; antige 96.1 0.004 1.4E-07 41.8 3.2 66 18-88 11-89 (210)
125 1gxe_A Myosin binding protein 96.1 0.0013 4.4E-08 44.7 0.7 56 18-79 29-115 (139)
126 2o26_X MAST/stem cell growth f 96.1 0.0058 2E-07 42.7 4.1 56 18-80 102-158 (290)
127 2v9r_A Roundabout homolog 1; p 96.1 0.0043 1.5E-07 40.9 3.2 62 18-88 122-184 (212)
128 2ec8_A MAST/stem cell growth f 96.1 0.0036 1.2E-07 47.9 3.1 64 18-89 125-189 (524)
129 3d9a_L Light chain of hyhel10 96.0 0.0033 1.1E-07 42.0 2.5 66 18-88 12-90 (213)
130 4fom_A Poliovirus receptor-rel 96.0 0.0096 3.3E-07 41.9 5.0 67 18-88 10-93 (308)
131 3laf_A Deleted in colorectal c 96.0 0.006 2E-07 44.2 4.0 65 18-88 132-196 (403)
132 2yd6_A PTPRD protein; hydrolas 96.0 0.0046 1.6E-07 41.7 3.2 66 18-89 119-187 (212)
133 3r4d_A CEA-related cell adhesi 96.0 0.008 2.7E-07 39.7 4.3 53 19-79 122-175 (208)
134 1neu_A Myelin P0 protein; stru 96.0 0.0067 2.3E-07 37.7 3.7 71 18-90 10-102 (124)
135 2yr3_A Myosin light chain kina 96.0 0.0019 6.5E-08 39.0 1.1 62 18-88 22-83 (99)
136 2v9t_A Roundabout homolog 1; s 96.0 0.011 3.8E-07 36.7 4.7 54 18-74 20-74 (117)
137 2ny1_B T-cell surface glycopro 96.0 0.0036 1.2E-07 41.1 2.6 66 18-88 6-87 (184)
138 4f80_A Butyrophilin subfamily 96.0 0.004 1.4E-07 42.4 2.8 68 18-88 15-102 (226)
139 1nko_A Sialic acid binding IG- 96.0 0.0085 2.9E-07 38.5 4.3 70 18-89 17-108 (132)
140 1qz1_A Neural cell adhesion mo 96.0 0.0046 1.6E-07 42.8 3.2 66 18-88 207-273 (291)
141 2yd1_A Tyrosine-protein phosph 95.9 0.0055 1.9E-07 41.1 3.2 55 18-79 121-175 (212)
142 2yd9_A Receptor-type tyrosine- 95.9 0.0064 2.2E-07 42.9 3.6 58 18-79 119-176 (304)
143 1qfo_A Protein (sialoadhesin); 95.9 0.013 4.5E-07 36.8 4.6 70 18-89 11-99 (119)
144 1oll_A NK receptor; immune sys 95.9 0.0051 1.7E-07 41.2 2.8 53 18-79 109-161 (188)
145 3b5h_A Cervical EMMPRIN, HAB18 95.9 0.0085 2.9E-07 39.1 3.8 66 18-88 94-166 (184)
146 2y25_A Myomesin; structural pr 95.9 0.006 2E-07 42.6 3.2 62 18-88 233-298 (317)
147 4ei6_B Vbeta16 XV19 type II na 95.9 0.012 4.1E-07 40.3 4.7 65 18-88 13-95 (245)
148 2y23_A Myomesin; structural pr 95.8 0.0047 1.6E-07 43.0 2.7 63 18-88 232-295 (312)
149 1sy6_A T-cell surface glycopro 95.8 0.0067 2.3E-07 41.9 3.4 53 20-79 126-179 (204)
150 3uzq_A Anti-dengue MAB 4E11; d 95.8 0.0059 2E-07 42.5 3.1 61 18-79 12-92 (253)
151 2or7_A T-cell immunoglobulin a 95.8 0.0038 1.3E-07 39.3 1.9 69 18-89 8-94 (115)
152 3nl4_H Antigen binding fragmen 95.8 0.0052 1.8E-07 41.6 2.6 61 18-79 10-87 (215)
153 2c5d_C AXL oncogene, tyrosine- 95.8 0.0018 6.2E-08 42.7 0.3 66 18-88 13-87 (195)
154 2id5_A Lingo-1, leucine rich r 95.8 0.0031 1.1E-07 48.2 1.6 58 18-79 396-453 (477)
155 1qfw_M FV, antibody (anti beta 95.8 0.0046 1.6E-07 38.7 2.1 66 18-88 12-90 (108)
156 3p2t_A Leukocyte immunoglobuli 95.8 0.0037 1.3E-07 41.8 1.7 58 18-79 110-167 (196)
157 2r15_A Myomesin-1; sarcomeric 95.7 0.011 3.9E-07 38.9 4.1 53 21-79 16-71 (212)
158 2y23_A Myomesin; structural pr 95.7 0.0088 3E-07 41.7 3.7 60 18-86 118-183 (312)
159 1nfd_E H57 FAB; complex (immun 95.7 0.004 1.4E-07 41.7 1.8 66 18-88 10-88 (212)
160 2rik_A Titin; I-SET IG fold, p 95.7 0.0076 2.6E-07 41.7 3.3 62 18-88 16-80 (284)
161 2ywz_A NEW antigen receptor va 95.7 0.0041 1.4E-07 39.3 1.8 65 18-88 11-85 (111)
162 2wim_A N-CAM 2, NCAM2, neural 95.7 0.018 6.1E-07 39.8 5.1 63 18-89 205-268 (291)
163 2rik_A Titin; I-SET IG fold, p 95.7 0.01 3.5E-07 41.0 3.9 63 18-89 203-268 (284)
164 1i8k_A Epidermal growth factor 95.7 0.012 4.2E-07 36.7 3.9 66 18-88 12-90 (107)
165 3ejj_X Macrophage colony-stimu 95.7 0.0038 1.3E-07 43.2 1.7 64 18-89 100-164 (289)
166 3m8o_H Immunoglobulin A1 heavy 95.7 0.0049 1.7E-07 41.9 2.2 68 18-88 11-100 (221)
167 3o3u_N Maltose-binding peripla 95.7 0.0047 1.6E-07 48.0 2.3 59 18-79 377-444 (581)
168 2nzi_A Titin; IG-domain, FNIII 95.7 0.0083 2.9E-07 41.9 3.4 57 18-80 15-75 (305)
169 3u83_A Poliovirus receptor-rel 95.7 0.021 7.3E-07 40.3 5.6 69 18-88 25-111 (331)
170 3rbs_A Myomesin-1; immunoglobu 95.7 0.013 4.4E-07 40.7 4.3 56 18-79 13-73 (207)
171 3q5y_A TCR N15 beta; IG, T cel 95.7 0.011 3.6E-07 40.6 3.8 65 18-88 13-94 (240)
172 2yd1_A Tyrosine-protein phosph 95.7 0.0075 2.6E-07 40.5 3.0 56 18-79 17-77 (212)
173 2j6e_L IGM, FAB light chain; a 95.7 0.0081 2.8E-07 40.7 3.2 68 18-88 30-110 (234)
174 1q9r_B S25-2 FAB (IGG1K) heavy 95.6 0.0052 1.8E-07 41.7 2.2 61 18-79 11-93 (222)
175 3oq3_B IFN-alpha/beta binding 95.6 0.011 3.9E-07 42.6 4.1 56 18-79 139-194 (329)
176 1c1e_H Catalytic antibody 1E9 95.6 0.0064 2.2E-07 41.0 2.6 68 18-88 11-98 (219)
177 2jll_A NCAM2, neural cell adhe 95.6 0.019 6.4E-07 41.5 5.2 62 14-79 8-75 (389)
178 3nl4_L Antigen binding fragmen 95.6 0.0066 2.3E-07 40.5 2.5 59 18-79 12-83 (213)
179 1f97_A Junction adhesion molec 95.5 0.0063 2.2E-07 39.9 2.3 66 18-89 12-85 (212)
180 2ens_A Advanced glycosylation 95.5 0.0066 2.3E-07 36.7 2.2 49 18-79 21-69 (96)
181 3bkj_L WO2 IGG2A FAB fragment 95.5 0.0085 2.9E-07 41.6 3.0 62 18-79 45-121 (252)
182 3liz_H 4C3 monoclonal antibody 95.5 0.0064 2.2E-07 42.8 2.4 68 18-88 11-98 (253)
183 3esu_F Antibody 14B7* light ch 95.5 0.012 4.2E-07 40.4 3.7 59 18-79 15-86 (250)
184 2fbo_J V1V2;, variable region- 95.5 0.0081 2.8E-07 40.6 2.7 66 19-89 148-233 (250)
185 1jhl_L IGG1-kappa D11.15 FV (l 95.5 0.0091 3.1E-07 37.1 2.7 66 18-88 12-90 (108)
186 1jbj_A CD3 epsilon and gamma e 95.5 0.012 4.1E-07 39.7 3.5 47 19-79 119-165 (186)
187 1rhf_A Tyrosine-protein kinase 95.5 0.012 4.1E-07 38.1 3.4 63 18-89 13-80 (182)
188 2q20_A VK1 O18/O8 germline lig 95.4 0.0076 2.6E-07 37.7 2.3 66 18-88 14-92 (109)
189 2c1o_A IGK-C protein; FAB frag 95.4 0.0065 2.2E-07 41.9 2.1 69 18-88 49-132 (254)
190 1fnl_A Low affinity immunoglob 95.4 0.013 4.3E-07 38.5 3.4 32 18-51 18-49 (175)
191 3juy_B 3B3 single chain varian 95.4 0.01 3.6E-07 41.3 3.1 68 18-88 17-104 (256)
192 1sq2_N Novel antigen receptor; 95.4 0.0051 1.8E-07 39.2 1.4 65 18-88 11-85 (113)
193 2v5m_A Dscam; neurobiology SPL 95.4 0.011 3.8E-07 42.7 3.3 65 19-89 16-85 (388)
194 2e7c_A Myosin-binding protein 95.4 0.0088 3E-07 37.5 2.5 54 18-79 35-91 (118)
195 4dzb_B Vbeta2 (MAIT T cell rec 95.4 0.008 2.7E-07 41.3 2.5 66 18-88 12-96 (246)
196 2ocw_A Polymeric-immunoglobuli 95.4 0.025 8.6E-07 43.5 5.5 62 18-79 342-418 (585)
197 3ux9_B SCFV antibody; five hel 95.4 0.007 2.4E-07 41.9 2.2 61 18-79 145-225 (256)
198 1fo0_B Protein (BM3.3 T cell r 95.4 0.034 1.2E-06 35.1 5.3 67 18-89 12-94 (112)
199 2v5t_A NCAM2, N-CAM 2, neural 95.4 0.0097 3.3E-07 38.4 2.7 63 18-89 109-172 (189)
200 4dkd_C Macrophage colony-stimu 95.4 0.0022 7.6E-08 44.5 -0.4 64 18-89 100-164 (292)
201 1q0x_L FAB 9B1, light chain; a 95.4 0.006 2.1E-07 40.8 1.7 61 18-79 11-85 (212)
202 1bih_A Hemolin; insect immunit 95.3 0.0076 2.6E-07 43.6 2.3 66 18-89 17-82 (395)
203 2ocw_A Polymeric-immunoglobuli 95.3 0.014 4.9E-07 44.9 3.9 69 18-88 11-94 (585)
204 3rbs_A Myomesin-1; immunoglobu 95.3 0.0058 2E-07 42.5 1.5 55 18-79 127-183 (207)
205 1cs6_A Axonin-1; neural cell a 95.3 0.013 4.4E-07 42.4 3.4 58 18-79 112-170 (382)
206 1oll_A NK receptor; immune sys 95.3 0.0049 1.7E-07 41.3 1.1 55 18-78 14-68 (188)
207 2d3v_A Leukocyte immunoglobuli 95.3 0.004 1.4E-07 41.7 0.6 55 18-78 15-69 (196)
208 3mj8_L Stimulatory hamster ant 95.3 0.013 4.5E-07 39.0 3.2 59 18-79 11-82 (213)
209 2otu_A FV light chain variable 95.2 0.013 4.4E-07 37.1 2.9 77 2-88 2-95 (115)
210 1u3h_A T-cell receptor alpha-c 94.2 0.0032 1.1E-07 39.7 0.0 67 18-89 10-91 (110)
211 2xzc_L FAB A.17 light chain; i 95.2 0.0076 2.6E-07 40.5 1.9 68 18-88 11-91 (216)
212 3qib_D 2B4 beta chain; IG doma 95.2 0.0065 2.2E-07 42.7 1.6 58 18-79 38-113 (270)
213 1ypz_E T cell receptor delta, 95.2 0.0055 1.9E-07 42.4 1.2 65 18-88 12-90 (207)
214 1j05_L T84.66 antibody, anti-C 95.2 0.016 5.5E-07 36.2 3.2 68 18-88 12-94 (111)
215 3n9g_H FAB fragment of MAB CR4 95.2 0.0094 3.2E-07 41.2 2.3 68 18-88 11-98 (230)
216 2d3v_A Leukocyte immunoglobuli 95.2 0.0041 1.4E-07 41.7 0.3 55 18-79 110-168 (196)
217 2va4_A NCAM2, N-CAM 2, neural 95.1 0.039 1.3E-06 35.6 5.0 69 14-88 102-176 (192)
218 1nkr_A P58-CL42 KIR; inhibitor 95.1 0.0036 1.2E-07 42.3 -0.0 56 18-78 18-74 (201)
219 1gl4_B Basement membrane-speci 95.1 0.0066 2.3E-07 36.6 1.2 60 18-88 21-81 (98)
220 1wio_A CD4, T-cell surface gly 95.1 0.0097 3.3E-07 43.3 2.3 66 18-88 5-86 (363)
221 3bfo_A Mucosa-associated lymph 95.1 0.015 5.1E-07 34.8 2.8 32 18-52 14-45 (91)
222 3s35_X Vascular endothelial gr 95.1 0.0045 1.5E-07 38.7 0.4 61 18-79 19-86 (122)
223 1ry7_B FGFR-3, fibroblast grow 95.1 0.0037 1.3E-07 44.4 0.0 66 13-88 15-80 (334)
224 1mju_H Immunoglobulin MS6-12; 95.1 0.007 2.4E-07 41.9 1.3 68 18-88 11-98 (227)
225 3d9a_H Heavy chain of hyhel10 95.1 0.013 4.3E-07 39.4 2.6 68 18-88 11-97 (210)
226 2qhl_A Novel immune-type recep 95.1 0.033 1.1E-06 34.9 4.4 66 18-88 10-95 (111)
227 1pew_A JTO2, A lambda-6 type i 95.0 0.024 8.3E-07 35.3 3.7 67 18-88 11-91 (109)
228 3sob_L Antibody light chain; b 95.0 0.011 3.8E-07 39.7 2.3 59 18-79 35-106 (237)
229 1nbq_A JAM, junctional adhesio 95.0 0.0065 2.2E-07 39.7 1.0 66 18-89 15-88 (209)
230 4fqp_A Poliovirus receptor; im 95.0 0.014 4.9E-07 41.4 2.9 69 18-88 11-98 (313)
231 3tv3_L PGT128 light chain, IG 95.0 0.025 8.5E-07 37.7 3.9 57 18-79 11-80 (211)
232 1igt_B IGG2A intact antibody - 95.0 0.012 4.1E-07 44.1 2.5 61 18-79 11-91 (444)
233 3auv_A SC-DSFV derived from th 95.0 0.024 8.2E-07 40.2 4.0 59 18-79 23-94 (276)
234 1nbq_A JAM, junctional adhesio 95.0 0.016 5.5E-07 37.8 2.8 66 18-88 118-190 (209)
235 2wbj_D OB TCR; transmembrane, 95.0 0.021 7E-07 40.6 3.6 59 18-79 35-112 (279)
236 3umt_A SCFV heavy chain and li 94.9 0.025 8.7E-07 39.3 3.9 68 18-88 13-100 (256)
237 1nkr_A P58-CL42 KIR; inhibitor 94.9 0.014 4.7E-07 39.3 2.4 50 18-75 118-171 (201)
238 3esu_F Antibody 14B7* light ch 94.9 0.017 5.8E-07 39.7 2.9 68 18-88 142-229 (250)
239 1dee_B IGM RF 2A2; FAB-IBP com 94.9 0.013 4.4E-07 40.4 2.3 68 18-88 11-98 (223)
240 1cs6_A Axonin-1; neural cell a 94.9 0.016 5.6E-07 41.8 2.9 61 18-88 305-365 (382)
241 1z7z_I Intercellular adhesion 94.9 0.0077 2.6E-07 44.8 1.2 57 18-78 97-153 (450)
242 1oaq_L Light chain; antibody, 94.9 0.021 7.3E-07 36.3 3.1 78 3-88 2-92 (120)
243 2wv3_A Neuroplastin; igcam, me 94.8 0.01 3.6E-07 38.9 1.7 51 22-79 18-68 (190)
244 3o4o_C Interleukin-1 receptor 94.8 0.016 5.6E-07 41.3 2.8 59 18-79 131-192 (339)
245 2y25_A Myomesin; structural pr 94.8 0.036 1.2E-06 38.6 4.5 57 18-80 17-74 (317)
246 1zox_A CLM-1; IG-superfamily, 94.8 0.022 7.6E-07 35.4 3.1 68 18-89 12-94 (113)
247 1op3_H FAB 2G12, heavy chain; 94.8 0.012 4.1E-07 40.4 2.0 61 18-79 11-91 (225)
248 2ghw_B Anti-SARS SCFV antibody 94.8 0.013 4.3E-07 40.2 2.1 61 18-79 13-93 (247)
249 1itb_B Type 1 interleukin-1 re 94.8 0.0048 1.7E-07 43.5 -0.1 66 18-88 16-81 (315)
250 3qr2_A Basigin; CD147, EMMPRIN 94.8 0.0028 9.4E-08 40.8 -1.3 66 18-88 32-109 (137)
251 2atp_B T-cell surface glycopro 94.8 0.026 9E-07 35.4 3.4 67 18-88 9-98 (115)
252 2fbj_H IGA-kappa J539 FAB (hea 94.8 0.018 6.2E-07 39.5 2.8 68 18-88 11-98 (220)
253 3moq_A NEW antigen receptor va 94.8 0.019 6.3E-07 38.3 2.8 58 18-79 11-78 (126)
254 2e27_L Anti-ciguatoxin antibod 94.8 0.04 1.4E-06 35.5 4.3 66 18-88 14-92 (119)
255 2d9c_A Signal-regulatory prote 94.7 0.016 5.5E-07 37.4 2.3 67 18-88 19-98 (136)
256 1i3g_L Antibody FV fragment; a 94.7 0.033 1.1E-06 34.9 3.7 66 18-88 15-93 (111)
257 2gi7_A GPVI protein; IG-like d 94.7 0.0084 2.9E-07 40.0 1.0 53 18-79 104-156 (184)
258 3r06_A Anti-mouse CD3epsilon a 94.7 0.015 5.2E-07 38.7 2.2 59 18-79 12-83 (213)
259 1ry7_B FGFR-3, fibroblast grow 94.7 0.023 8E-07 40.3 3.3 59 18-79 134-192 (334)
260 3sgj_C Human FCG3A receptor; r 94.7 0.03 1E-06 38.4 3.8 48 18-78 18-65 (204)
261 3bj9_1 Immunoglobulin IOTA cha 94.7 0.032 1.1E-06 34.9 3.6 68 18-88 9-96 (116)
262 1eeq_A Kappa-4 immunoglobulin 94.7 0.03 1E-06 35.2 3.5 68 18-88 12-96 (114)
263 3sob_H Antibody heavy chain, l 94.7 0.013 4.3E-07 41.4 1.8 68 18-88 34-121 (256)
264 1pz5_B Heavy chain of FAB (SYA 94.7 0.02 6.7E-07 38.7 2.7 61 18-79 11-93 (220)
265 3mtr_A N-CAM-1, NCAM-1, neural 94.7 0.018 6.1E-07 38.8 2.5 57 18-79 29-88 (215)
266 1svz_A Immunoglobulin;, single 94.6 0.022 7.5E-07 39.2 2.9 69 18-89 138-226 (247)
267 2ghw_B Anti-SARS SCFV antibody 94.6 0.033 1.1E-06 38.2 3.8 59 18-79 146-217 (247)
268 3s96_B 3B5H10 FAB light chain; 94.6 0.02 6.7E-07 38.2 2.6 60 18-79 11-87 (218)
269 1hxm_B Gamma-delta T-cell rece 94.6 0.025 8.5E-07 39.4 3.2 69 18-89 12-100 (242)
270 3umt_A SCFV heavy chain and li 94.6 0.016 5.5E-07 40.3 2.2 59 18-79 149-220 (256)
271 1mqk_L Antibody 7E2 FV fragmen 94.6 0.018 6.2E-07 37.1 2.3 59 18-79 12-83 (120)
272 2a38_A Titin; Z1Z2, structural 94.6 0.021 7.1E-07 37.1 2.6 57 18-79 16-75 (194)
273 2i24_N NEW antigen receptor PB 94.6 0.026 8.8E-07 37.0 3.1 66 18-89 11-86 (121)
274 1uct_A Immunoglobulin alpha FC 94.6 0.016 5.6E-07 40.4 2.2 54 18-79 116-169 (218)
275 1sy6_A T-cell surface glycopro 94.6 0.046 1.6E-06 37.6 4.5 47 18-78 14-60 (204)
276 3mlr_H Human monoclonal anti-H 94.6 0.014 4.7E-07 40.5 1.8 68 18-88 11-98 (226)
277 3tv3_H PGT128 heavy chain, IG 94.6 0.027 9.3E-07 39.3 3.3 69 18-88 11-105 (239)
278 3s97_C Contactin-1; carbonic a 94.5 0.024 8.1E-07 36.8 2.8 61 18-88 124-184 (201)
279 1f97_A Junction adhesion molec 94.5 0.043 1.5E-06 35.8 4.1 66 18-88 115-188 (212)
280 3qhz_H Human monoclonal antibo 94.5 0.024 8.3E-07 38.9 3.0 69 18-88 11-102 (232)
281 2jju_A Signal regulatory prote 94.5 0.057 2E-06 34.7 4.5 60 18-79 14-86 (127)
282 3iu4_H CHP3 FAB heavy chain; a 94.5 0.018 6.2E-07 41.5 2.3 68 18-88 11-97 (263)
283 2gi7_A GPVI protein; IG-like d 94.5 0.016 5.5E-07 38.6 1.9 28 18-49 18-45 (184)
284 1moe_A Anti-CEA MAB T84.66; an 94.5 0.042 1.4E-06 37.3 4.0 69 18-88 12-94 (240)
285 2pnd_A V-SET and immunoglobuli 94.4 0.088 3E-06 33.3 5.3 69 19-89 13-98 (119)
286 3mjg_X Beta-type platelet-deri 94.4 0.028 9.7E-07 39.0 3.1 57 18-89 11-71 (289)
287 1za6_B IGG heavy chain; immuno 94.4 0.019 6.5E-07 41.8 2.3 69 18-89 11-99 (344)
288 3vh8_G Killer cell immunoglobu 94.4 0.0058 2E-07 43.6 -0.5 53 18-79 34-86 (316)
289 3jz7_A MCAR, CAR, coxsackievir 94.4 0.012 4.2E-07 38.4 1.2 61 18-88 132-195 (214)
290 3dmk_A DOWN syndrome cell adhe 94.4 0.02 6.9E-07 46.2 2.6 51 18-75 537-587 (816)
291 3ux9_B SCFV antibody; five hel 94.4 0.06 2.1E-06 37.1 4.7 61 18-79 13-86 (256)
292 1ypz_F T-cell receptor gamma c 94.4 0.046 1.6E-06 37.9 4.2 68 18-88 12-98 (230)
293 1itb_B Type 1 interleukin-1 re 94.4 0.046 1.6E-06 38.4 4.2 58 18-79 114-174 (315)
294 1f2q_A High affinity immunoglo 94.4 0.029 1E-06 36.7 3.0 48 18-78 15-62 (176)
295 3gkz_A Anti-methamphetamine si 94.3 0.041 1.4E-06 38.1 3.8 61 18-79 19-98 (257)
296 3p2t_A Leukocyte immunoglobuli 94.3 0.0091 3.1E-07 39.8 0.4 53 18-78 15-69 (196)
297 3bae_H WO2 IGG2A FAB fragment 94.3 0.017 5.9E-07 39.7 1.8 62 18-79 11-92 (228)
298 2j8h_A Titin, connectin; cardi 94.3 0.011 3.8E-07 38.6 0.8 62 18-88 115-180 (197)
299 2rgs_A I, IG gamma-2B heavy ch 94.3 0.0096 3.3E-07 41.0 0.5 59 19-79 23-88 (218)
300 2yz1_A Tyrosine-protein phosph 94.3 0.015 5.2E-07 36.6 1.4 67 18-88 18-97 (120)
301 2rcj_C Light chain; immunoglob 94.3 0.028 9.4E-07 42.9 3.1 59 18-79 11-82 (523)
302 3nl4_L Antigen binding fragmen 94.3 0.013 4.3E-07 39.1 1.0 65 19-89 126-198 (213)
303 1wio_A CD4, T-cell surface gly 94.2 0.075 2.6E-06 38.6 5.1 62 18-79 187-267 (363)
304 2d9q_B Granulocyte colony-stim 94.2 0.023 7.8E-07 41.0 2.4 61 13-79 7-73 (313)
305 1igy_B IGG1 intact antibody MA 94.2 0.026 9E-07 42.2 2.8 61 18-79 10-90 (434)
306 2p1y_A Bispecific alpha/beta T 94.2 0.029 1E-06 38.1 2.8 59 18-79 138-211 (238)
307 3bqu_C 3H6 FAB light chain; be 94.2 0.0035 1.2E-07 42.6 -1.9 66 18-88 34-112 (233)
308 2q87_A CMRF35-H antigen; all-b 94.2 0.02 6.7E-07 35.6 1.7 68 18-89 7-88 (110)
309 2vsd_A CHIR AB1; immune system 94.2 0.035 1.2E-06 34.9 2.9 52 18-78 15-67 (105)
310 2cry_A KIN of IRRE-like protei 94.2 0.0053 1.8E-07 38.7 -1.0 57 18-78 24-87 (122)
311 1c5d_H Monoclonal antibody aga 94.2 0.036 1.2E-06 37.8 3.1 68 18-88 11-97 (215)
312 3p3y_A Neurofascin; IG domains 94.1 0.062 2.1E-06 38.7 4.5 55 18-79 233-287 (404)
313 1ugn_A LIR1, leukocyte immunog 94.1 0.0084 2.9E-07 40.1 -0.1 55 18-78 15-69 (198)
314 1qgc_4 Protein (immunoglobulin 94.1 0.033 1.1E-06 41.0 3.0 62 18-79 12-87 (438)
315 2znx_A SCFV; fluorotryptohpan, 94.1 0.02 6.8E-07 39.7 1.7 59 18-79 12-83 (242)
316 3u6r_L Antibody 1:7 (light cha 94.0 0.078 2.7E-06 35.9 4.7 66 18-88 11-89 (143)
317 4fa8_A Secreted protein BARF1; 94.0 0.031 1.1E-06 39.0 2.7 61 18-79 4-81 (203)
318 3lcy_A Titin; A-BAND, IG tande 94.0 0.025 8.7E-07 36.5 2.0 52 18-76 114-168 (197)
319 3d9a_L Light chain of hyhel10 94.0 0.02 6.9E-07 38.1 1.6 66 19-89 124-197 (213)
320 2hp4_A T-cell surface glycopro 94.0 0.076 2.6E-06 33.8 4.3 68 18-89 11-97 (114)
321 3u1s_H FAB PGT145 heavy chain; 94.0 0.035 1.2E-06 39.7 2.9 68 18-88 34-121 (267)
322 1oga_E TRBC1, T-cell receptor 93.9 0.049 1.7E-06 38.1 3.6 58 18-79 14-88 (252)
323 2wng_A Tyrosine-protein phosph 93.9 0.074 2.5E-06 37.9 4.5 67 18-88 14-93 (327)
324 1p6f_A NKP46, natural cytotoxi 93.9 0.065 2.2E-06 38.3 4.2 53 18-79 112-164 (242)
325 4ffy_L DENV1-E111 single chain 93.9 0.079 2.7E-06 34.1 4.2 62 18-79 12-87 (126)
326 3u2s_H PG9 heavy chain; greek 93.8 0.033 1.1E-06 39.7 2.5 69 18-89 10-98 (248)
327 3kld_A Contactin 4, axcam, BIG 93.8 0.053 1.8E-06 40.0 3.7 60 18-87 306-365 (384)
328 1x9q_A SCFV, 4M5.3 anti-fluore 93.8 0.033 1.1E-06 39.2 2.5 62 18-79 26-102 (268)
329 3fku_X Neutralizing antibody F 93.8 0.025 8.6E-07 40.5 1.8 61 18-79 11-91 (280)
330 1hzh_H IGG, immunoglobulin hea 93.8 0.032 1.1E-06 42.0 2.5 68 18-88 11-98 (457)
331 3juy_B 3B3 single chain varian 93.8 0.04 1.4E-06 38.3 2.8 60 18-79 160-232 (256)
332 1e07_A Carcinoembryonic antige 93.7 0.12 4E-06 40.5 5.7 62 18-89 122-184 (642)
333 1f3r_B FV antibody fragment; I 93.7 0.086 3E-06 36.8 4.6 59 18-79 150-221 (257)
334 1svz_A Immunoglobulin;, single 93.7 0.044 1.5E-06 37.6 3.0 62 18-79 12-88 (247)
335 1fnl_A Low affinity immunoglob 93.7 0.092 3.2E-06 34.3 4.4 50 18-78 99-148 (175)
336 1dn0_B IGM-kappa cold agglutin 93.7 0.044 1.5E-06 38.1 3.0 69 18-89 11-98 (232)
337 1fo0_A Protein (BM3.3 T cell r 93.7 0.039 1.3E-06 34.9 2.5 68 18-89 11-94 (116)
338 2z35_A T-cell receptor alpha-c 93.7 0.047 1.6E-06 34.2 2.8 67 18-89 11-92 (112)
339 3oq3_B IFN-alpha/beta binding 93.6 0.02 6.9E-07 41.3 1.2 59 18-80 239-306 (329)
340 3uzq_A Anti-dengue MAB 4E11; d 93.6 0.055 1.9E-06 37.5 3.4 62 18-79 144-219 (253)
341 1p6f_A NKP46, natural cytotoxi 93.6 0.02 7E-07 40.9 1.2 55 18-78 17-71 (242)
342 3t0v_A Immunoglobulin variable 93.6 0.068 2.3E-06 35.0 3.6 77 3-88 2-91 (123)
343 2v9r_A Roundabout homolog 1; p 93.6 0.077 2.6E-06 34.7 3.9 54 18-74 20-74 (212)
344 2h32_A Immunoglobulin IOTA cha 93.6 0.076 2.6E-06 34.5 3.8 66 19-88 12-98 (126)
345 2vol_A Murine IGG FC; FC, zinc 93.6 0.0082 2.8E-07 40.9 -1.0 57 19-78 15-79 (207)
346 1f2q_A High affinity immunoglo 93.5 0.1 3.5E-06 34.0 4.3 37 12-51 91-127 (176)
347 3mj6_A Junctional adhesion mol 93.5 0.054 1.9E-06 37.1 3.1 62 18-79 129-213 (268)
348 2yc1_B Single chain antibody f 93.5 0.084 2.9E-06 36.0 4.0 59 18-79 27-98 (146)
349 1p4b_L Antibody variable light 93.4 0.12 4E-06 34.5 4.6 77 3-88 7-97 (135)
350 1lk3_L 9D7 light chain; antige 93.4 0.03 1E-06 37.4 1.7 66 19-89 123-196 (210)
351 1bec_A 14.3.D T cell antigen r 93.4 0.037 1.3E-06 38.2 2.2 65 18-88 10-91 (238)
352 1tvd_A T cell receptor, ES204 93.4 0.066 2.3E-06 33.6 3.1 68 18-89 11-96 (116)
353 3rjd_A High affinity immunoglo 93.3 0.045 1.5E-06 37.1 2.4 33 18-52 12-44 (262)
354 2gjj_A A21 single-chain antibo 93.3 0.059 2E-06 38.2 3.2 62 18-79 16-93 (264)
355 2o26_X MAST/stem cell growth f 93.3 0.052 1.8E-06 37.8 2.8 46 18-78 23-68 (290)
356 3tf7_C 42F3 MUT7 SCFV (42F3 al 93.2 0.033 1.1E-06 39.0 1.6 59 18-79 14-88 (256)
357 3nfj_J T cell receptor beta ch 93.2 0.06 2.1E-06 36.9 2.9 59 18-79 12-86 (245)
358 2wzp_D Camelid VHH5; baseplate 93.1 0.15 5.1E-06 32.4 4.6 69 18-89 11-99 (123)
359 1f3r_B FV antibody fragment; I 93.1 0.034 1.2E-06 38.9 1.6 60 18-79 11-90 (257)
360 1zvo_C Myeloma immunoglobulin 93.1 0.073 2.5E-06 41.7 3.6 70 18-89 11-100 (512)
361 2c1o_A IGK-C protein; FAB frag 93.1 0.034 1.1E-06 38.3 1.5 66 19-89 166-239 (254)
362 2xqy_G A13-D6.3 monoclonal ant 93.1 0.038 1.3E-06 39.8 1.8 61 18-79 17-97 (261)
363 4dep_C Interleukin-1 receptor 93.1 0.06 2E-06 38.5 2.9 56 18-79 131-189 (349)
364 4hwn_A FC receptor-like A; FCR 93.1 0.089 3.1E-06 33.2 3.4 34 18-51 18-53 (108)
365 2ec8_A MAST/stem cell growth f 93.0 0.038 1.3E-06 42.2 1.9 57 18-79 324-387 (524)
366 3kg5_A B-cell antigen receptor 93.0 0.056 1.9E-06 36.4 2.5 55 18-79 29-92 (134)
367 1dlf_L Anti-dansyl immunoglobu 93.0 0.068 2.3E-06 33.4 2.8 68 18-88 12-95 (113)
368 1sjv_A R9; camelids antibody, 93.0 0.11 3.9E-06 32.5 3.8 69 18-89 11-98 (114)
369 1moe_A Anti-CEA MAB T84.66; an 93.0 0.036 1.2E-06 37.7 1.5 69 18-89 130-218 (240)
370 3b43_A Titin; I-SET IG fold, e 93.0 0.042 1.4E-06 43.1 2.1 55 18-79 395-452 (570)
371 2bnu_A TCR alpha chain, T-cell 93.0 0.088 3E-06 36.7 3.6 67 18-89 11-92 (203)
372 2nms_A CMRF35-like-molecule 1; 93.0 0.12 4E-06 33.6 4.0 59 19-79 14-87 (124)
373 3b43_A Titin; I-SET IG fold, e 92.9 0.078 2.7E-06 41.6 3.6 55 18-79 208-265 (570)
374 3omz_A Human vdelta1 gamma del 92.9 0.08 2.7E-06 36.8 3.3 59 18-79 13-91 (259)
375 4dep_C Interleukin-1 receptor 92.9 0.058 2E-06 38.6 2.6 61 18-79 18-91 (349)
376 3ry4_A Low affinity immunoglob 92.9 0.085 2.9E-06 33.7 3.2 33 18-52 15-47 (170)
377 1wit_A Twitchin 18TH IGSF modu 92.9 0.039 1.3E-06 32.9 1.5 55 18-79 13-70 (93)
378 3auv_A SC-DSFV derived from th 92.9 0.058 2E-06 38.2 2.5 61 18-79 145-225 (276)
379 1nqb_A Single-chain antibody f 92.8 0.11 3.7E-06 36.6 3.9 61 18-79 11-91 (256)
380 2vr9_A Roundabout 1, ROBO; imm 92.8 0.061 2.1E-06 35.7 2.5 57 18-78 20-80 (217)
381 3ry4_A Low affinity immunoglob 92.8 0.12 4.2E-06 33.0 3.9 50 18-78 96-145 (170)
382 1nfd_E H57 FAB; complex (immun 92.8 0.016 5.3E-07 38.8 -0.6 65 19-89 125-196 (212)
383 3bdb_A Novel immune-type recep 92.7 0.11 3.7E-06 34.3 3.6 66 18-88 10-95 (137)
384 2ny1_B T-cell surface glycopro 92.7 0.084 2.9E-06 34.4 3.0 48 18-79 108-155 (184)
385 1x9q_A SCFV, 4M5.3 anti-fluore 92.7 0.073 2.5E-06 37.4 2.8 68 18-88 162-251 (268)
386 3k0w_A Mucosa-associated lymph 92.7 0.088 3E-06 35.6 3.2 32 18-52 29-60 (218)
387 1a2y_B IGG1-kappa D1.3 FV (hea 92.6 0.082 2.8E-06 33.3 2.8 69 18-89 11-98 (116)
388 1iga_A IGA1; immunoglobulin; N 92.6 0.094 3.2E-06 39.9 3.5 61 18-79 12-92 (475)
389 3bp6_A Programmed cell death p 92.6 0.13 4.4E-06 32.6 3.7 60 18-79 10-85 (117)
390 2p1y_A Bispecific alpha/beta T 92.6 0.082 2.8E-06 35.8 2.9 58 18-79 11-85 (238)
391 1j05_H T84.66 antibody, anti-C 92.4 0.093 3.2E-06 33.3 2.9 69 18-89 11-99 (121)
392 1hkf_A NKP44, NK cell activati 92.4 0.21 7.3E-06 32.3 4.6 69 18-89 21-104 (122)
393 2yd6_A PTPRD protein; hydrolas 92.3 0.13 4.4E-06 34.4 3.6 56 14-78 14-75 (212)
394 2ifg_A High affinity nerve gro 92.3 0.02 6.9E-07 42.0 -0.5 60 14-80 166-225 (347)
395 3bia_X T-cell immunoglobulin a 92.3 0.37 1.3E-05 30.0 5.6 67 18-88 7-92 (116)
396 3sgj_C Human FCG3A receptor; r 92.3 0.13 4.4E-06 35.2 3.6 50 18-78 99-148 (204)
397 3vh8_G Killer cell immunoglobu 92.3 0.019 6.4E-07 41.0 -0.7 57 18-79 129-186 (316)
398 1b6u_A KIR2DL3, P58 killer cel 92.2 0.093 3.2E-06 38.1 3.0 50 18-75 117-170 (257)
399 2ol3_A BM3.3 T-cell receptor a 92.2 0.14 4.8E-06 34.2 3.7 67 18-88 11-93 (142)
400 1kgc_D T-cell receptor alpha c 92.2 0.11 3.7E-06 36.5 3.2 67 18-89 10-90 (206)
401 3rrq_A Protein PD-1, programme 92.2 0.41 1.4E-05 31.0 5.8 60 18-79 12-87 (129)
402 2nzi_A Titin; IG-domain, FNIII 92.1 0.045 1.6E-06 38.1 1.2 55 18-79 115-173 (305)
403 2rcj_C Light chain; immunoglob 92.1 0.14 4.7E-06 39.1 3.9 59 18-79 125-190 (523)
404 3mj8_L Stimulatory hamster ant 92.1 0.038 1.3E-06 36.7 0.7 66 19-89 126-197 (213)
405 2p45_B Antibody CAB-RN05; seMe 92.0 0.14 4.9E-06 32.5 3.4 69 18-89 13-101 (123)
406 2nw2_A ELS4 TCR alpha chain; T 92.0 0.18 6.3E-06 35.3 4.2 67 18-89 10-90 (200)
407 2oi9_C V beta, T cell receptor 92.0 0.27 9.2E-06 31.6 4.8 58 18-79 12-86 (121)
408 2wqr_A IG epsilon chain C regi 92.0 0.056 1.9E-06 38.8 1.5 56 20-78 232-295 (323)
409 2xt1_B Camelid VHH 9; viral pr 92.0 0.12 4.1E-06 33.2 3.0 68 18-88 13-100 (121)
410 2yd9_A Receptor-type tyrosine- 91.9 0.14 4.7E-06 36.0 3.5 56 14-78 14-75 (304)
411 1n4x_H Immunoglobulin heavy ch 91.9 0.1 3.5E-06 32.9 2.6 68 18-88 11-98 (120)
412 2znx_A SCFV; fluorotryptohpan, 91.9 0.1 3.5E-06 36.1 2.8 69 18-89 133-220 (242)
413 3pv7_A B7-H6, IG-like domain-c 91.9 0.091 3.1E-06 35.9 2.4 29 18-47 14-45 (248)
414 3bn9_D E2 FAB heavy chain; ant 91.7 0.077 2.6E-06 38.3 2.1 68 18-88 11-98 (257)
415 2yc1_A Single chain antibody f 91.7 0.083 2.8E-06 33.1 2.0 69 18-89 11-99 (117)
416 1bii_B Beta-2 microglobulin, M 91.7 0.44 1.5E-05 31.6 5.7 33 18-51 34-66 (119)
417 1b6u_A KIR2DL3, P58 killer cel 91.7 0.017 5.6E-07 42.1 -1.6 56 18-78 17-73 (257)
418 2edn_A Myosin-binding protein 91.6 0.034 1.1E-06 37.4 0.0 61 18-80 23-93 (118)
419 1l6x_A Immunoglobulin gamma-1 91.6 0.12 4E-06 35.0 2.7 53 20-74 16-69 (207)
420 2eys_A NKT15; natural killer T 91.6 0.12 4.1E-06 36.7 2.9 66 18-88 14-94 (210)
421 2oz4_A Intercellular adhesion 91.5 0.27 9.3E-06 33.9 4.6 34 18-52 14-48 (265)
422 1kxv_C Camelid VHH domain CAB1 91.5 0.17 5.8E-06 32.2 3.3 69 18-89 11-98 (121)
423 3b5h_A Cervical EMMPRIN, HAB18 91.5 0.49 1.7E-05 30.5 5.6 40 12-53 4-43 (184)
424 3bqu_C 3H6 FAB light chain; be 91.4 0.066 2.3E-06 36.2 1.4 55 19-76 146-208 (233)
425 3oai_A Maltose-binding peripla 91.4 0.15 5.1E-06 38.9 3.5 70 18-89 396-487 (507)
426 2c5d_C AXL oncogene, tyrosine- 91.4 0.21 7.1E-06 32.6 3.7 50 18-75 117-166 (195)
427 1lp9_E T-cell receptor alpha c 91.4 0.15 5E-06 35.5 3.1 66 18-88 12-92 (194)
428 3c6l_A TCR 2W20 alpha chain; T 90.7 0.037 1.3E-06 39.2 0.0 66 18-88 11-91 (185)
429 3grw_A Fibroblast growth facto 91.3 0.099 3.4E-06 35.1 2.1 55 18-78 125-193 (241)
430 3v2a_R Vascular endothelial gr 91.3 0.038 1.3E-06 43.7 0.0 55 18-79 677-732 (772)
431 1n26_A IL-6 receptor alpha cha 91.2 0.15 5E-06 37.3 3.1 53 20-78 19-71 (325)
432 2wqr_A IG epsilon chain C regi 91.2 0.024 8.1E-07 40.8 -1.2 59 19-79 125-190 (323)
433 1dr9_A B7-1 (CD80), T lymphocy 91.2 0.57 2E-05 30.7 5.8 47 20-72 119-166 (201)
434 2ifg_A High affinity nerve gro 91.1 0.062 2.1E-06 39.3 1.0 66 18-88 257-328 (347)
435 2xzc_L FAB A.17 light chain; i 91.1 0.083 2.9E-06 35.3 1.6 54 20-76 127-188 (216)
436 1pz5_B Heavy chain of FAB (SYA 91.1 0.073 2.5E-06 35.9 1.3 67 18-91 136-207 (220)
437 3b9v_A Heavy chain variable do 91.0 0.14 4.7E-06 32.3 2.5 68 18-88 11-98 (120)
438 1qok_A MFE-23 recombinant anti 90.9 0.11 3.9E-06 36.9 2.3 58 18-79 173-243 (282)
439 1qgc_4 Protein (immunoglobulin 90.9 0.12 4.1E-06 38.0 2.3 57 19-78 128-192 (438)
440 3rjd_A High affinity immunoglo 90.9 0.29 9.8E-06 33.0 4.1 35 18-52 181-217 (262)
441 3m8o_H Immunoglobulin A1 heavy 90.8 0.13 4.4E-06 34.8 2.3 66 20-89 136-207 (221)
442 1zvh_A Immunoglobulin heavy ch 90.8 0.21 7.3E-06 32.8 3.4 68 18-88 11-98 (134)
443 3bik_B Programmed cell death p 90.8 0.56 1.9E-05 30.7 5.4 60 18-79 20-95 (134)
444 1hxm_A Gamma-delta T-cell rece 90.8 0.17 5.8E-06 36.0 3.1 68 18-88 12-94 (229)
445 2x1q_A Gelsolin nanobody; cont 90.7 0.24 8.3E-06 31.9 3.5 69 18-89 11-99 (127)
446 1i1c_A IGG2A, IG gamma-2A chai 90.7 0.036 1.2E-06 39.3 -0.6 57 19-78 29-93 (239)
447 2gjj_A A21 single-chain antibo 90.6 0.14 4.7E-06 36.3 2.4 68 18-88 149-236 (264)
448 2gki_A Nuclease; anti-DNA anti 90.5 0.21 7.3E-06 35.8 3.4 69 18-88 170-254 (291)
449 1qok_A MFE-23 recombinant anti 90.5 0.19 6.3E-06 35.8 3.0 60 18-79 37-117 (282)
450 1op3_H FAB 2G12, heavy chain; 90.4 0.11 3.8E-06 35.5 1.8 66 19-90 140-210 (225)
451 2gki_A Nuclease; anti-DNA anti 90.4 0.047 1.6E-06 39.3 -0.2 68 18-88 33-120 (291)
452 1xiw_D Immunoglobulin heavy ch 90.4 0.21 7.3E-06 31.7 3.0 68 19-89 12-99 (122)
453 1uct_A Immunoglobulin alpha FC 90.4 0.082 2.8E-06 36.8 1.1 55 18-79 19-76 (218)
454 3k0w_A Mucosa-associated lymph 90.4 0.16 5.3E-06 34.4 2.4 33 18-53 129-161 (218)
455 2jll_A NCAM2, neural cell adhe 90.4 0.16 5.4E-06 36.6 2.6 56 18-78 111-169 (389)
456 3qjh_A 5C.C7 alpha chain; immu 90.3 0.33 1.1E-05 35.1 4.3 65 18-88 14-91 (205)
457 3qs7_E FL cytokine receptor; i 90.3 0.22 7.4E-06 38.3 3.5 31 18-51 59-89 (423)
458 3bkj_L WO2 IGG2A FAB fragment 90.3 0.09 3.1E-06 36.4 1.2 57 19-78 162-226 (252)
459 3nl4_H Antigen binding fragmen 90.1 0.17 5.7E-06 34.0 2.4 32 18-50 131-162 (215)
460 3ojm_B Fibroblast growth facto 90.1 0.37 1.2E-05 31.7 4.0 63 18-88 129-204 (231)
461 3tv3_L PGT128 light chain, IG 90.0 0.075 2.6E-06 35.3 0.6 56 19-77 123-185 (211)
462 1mfa_H IGG1-lambda Se155-4 FAB 90.0 0.26 8.7E-06 31.1 3.1 67 19-88 12-98 (120)
463 3osk_A Cytotoxic T-lymphocyte 90.0 0.53 1.8E-05 30.5 4.7 69 18-88 12-96 (130)
464 2wng_A Tyrosine-protein phosph 89.9 1.4 4.8E-05 31.1 7.3 42 10-53 224-265 (327)
465 1ow0_A IG alpha-1 chain C regi 89.8 0.29 9.8E-06 33.4 3.4 34 19-53 119-152 (214)
466 1olz_A Semaphorin 4D; developm 89.8 0.11 3.8E-06 44.1 1.6 55 18-79 544-598 (663)
467 2q86_A Valpha14 TCR; INKT cell 89.8 0.45 1.5E-05 34.2 4.6 67 18-89 12-93 (229)
468 1mqk_H Antibody 7E2 FV fragmen 89.7 0.16 5.6E-06 32.7 2.0 69 18-89 11-99 (127)
469 1ymm_D T cell receptor alpha c 89.6 0.056 1.9E-06 38.1 -0.3 58 18-79 12-84 (207)
470 2w59_A IGY FCU3-4; immunoglobu 89.6 0.036 1.2E-06 38.6 -1.3 58 18-78 24-88 (231)
471 3gkz_A Anti-methamphetamine si 89.6 0.35 1.2E-05 33.3 3.8 60 18-79 152-224 (257)
472 1wwb_X Protein (brain derived 89.6 0.54 1.8E-05 28.9 4.3 53 20-79 14-74 (103)
473 1kxt_B Immunoglobulin VHH frag 89.5 0.31 1E-05 31.5 3.2 69 18-89 11-98 (127)
474 1vca_A VCAM-D1,2, human vascul 89.5 0.26 9E-06 33.5 3.0 50 21-79 15-66 (202)
475 2pet_A Lutheran blood group gl 89.4 0.31 1.1E-05 32.3 3.3 66 19-89 130-209 (231)
476 1nqb_A Single-chain antibody f 89.3 0.44 1.5E-05 33.4 4.2 62 18-79 132-208 (256)
477 2ak4_D SB27 T cell receptor al 89.3 0.31 1.1E-05 34.3 3.4 68 18-89 14-97 (211)
478 1oga_D T-cell receptor alpha c 89.2 0.6 2.1E-05 33.2 4.9 66 18-89 12-92 (215)
479 3cx5_J Heavy chain (VH) of FV- 89.2 0.098 3.4E-06 33.8 0.6 68 18-88 11-98 (127)
480 3liz_H 4C3 monoclonal antibody 89.1 0.19 6.6E-06 35.1 2.2 65 19-89 136-204 (253)
481 2aty_A Complement receptor chi 89.1 0.36 1.2E-05 36.3 3.8 59 19-79 180-245 (376)
482 1gsm_A Madcam-1, mucosal addre 89.1 0.2 7E-06 36.4 2.3 55 18-80 18-72 (210)
483 1xed_A Polymeric-immunoglobuli 89.0 0.32 1.1E-05 31.1 3.0 79 2-89 1-95 (117)
484 1wwc_A Protein (NT-3 growth fa 88.9 0.45 1.5E-05 29.4 3.6 50 23-79 21-77 (118)
485 1rjc_A 1D2L19, camelid heavy c 88.9 0.51 1.8E-05 31.2 4.1 69 18-89 11-99 (137)
486 3omz_A Human vdelta1 gamma del 88.8 0.33 1.1E-05 33.6 3.2 67 18-88 147-228 (259)
487 1i3u_A Antibody VHH LAMA domai 88.7 0.29 9.9E-06 31.4 2.7 69 18-89 11-104 (127)
488 1hzh_H IGG, immunoglobulin hea 88.7 0.27 9.1E-06 37.0 2.8 59 18-79 143-206 (457)
489 2dav_A SLOW MYBP-C, myosin-bin 88.6 0.15 5.1E-06 34.6 1.3 60 18-79 18-87 (126)
490 1nez_G T-cell surface glycopro 88.6 0.42 1.4E-05 31.3 3.4 59 18-79 15-97 (128)
491 3ejj_X Macrophage colony-stimu 88.4 0.29 9.9E-06 33.6 2.7 55 18-88 15-70 (289)
492 3s96_B 3B5H10 FAB light chain; 88.4 0.13 4.5E-06 34.1 0.8 45 18-63 132-182 (218)
493 1dee_B IGM RF 2A2; FAB-IBP com 88.3 0.28 9.7E-06 33.5 2.5 68 19-89 138-211 (223)
494 1yc7_A Anti-VSG immunoglobulin 88.3 0.52 1.8E-05 30.5 3.7 68 18-88 11-97 (124)
495 1q9r_B S25-2 FAB (IGG1K) heavy 88.3 0.14 4.8E-06 34.5 1.0 64 19-89 139-207 (222)
496 3d85_D IL-12B, interleukin-12 88.1 0.47 1.6E-05 35.4 3.9 36 8-49 8-43 (306)
497 4dkd_C Macrophage colony-stimu 88.1 0.27 9.4E-06 33.8 2.4 54 18-89 15-71 (292)
498 3dmm_C T-cell surface glycopro 88.0 0.58 2E-05 32.9 4.1 59 18-79 20-102 (166)
499 3u83_A Poliovirus receptor-rel 88.0 0.24 8.1E-06 34.8 2.0 52 18-78 243-295 (331)
500 3tf7_C 42F3 MUT7 SCFV (42F3 al 87.8 0.35 1.2E-05 33.6 2.8 58 18-79 148-222 (256)
No 1
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.88 E-value=4.6e-10 Score=90.71 Aligned_cols=77 Identities=42% Similarity=0.723 Sum_probs=64.3
Q ss_pred cceeeeceEEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 2 LPVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 2 rAVV~Q~Yev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
++++.+.|+...... .|+.|++|+|.|.+|++..+.+...+|++++ ..+.+....+|||.++++|.|+|++++.+|+
T Consensus 134 ~~~~~~~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~ 211 (816)
T 3dmk_A 134 RAVVAQYYEADVNKE-HVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDG 211 (816)
T ss_dssp EEECCCCCCCBCCCE-EEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCBTTTEEECTTSCEEESSCCGGGS
T ss_pred EEEEccccEEEEecc-eEecCceEEEEECCCccccccEEEEEEEecCceEeccccCCCceEEEecCceEEEecCChhhc
Confidence 344556666666777 8999999999999998888888899999998 4444655678999999999999999999995
No 2
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.19 E-value=4.2e-06 Score=55.33 Aligned_cols=65 Identities=18% Similarity=0.319 Sum_probs=48.0
Q ss_pred EEEeeeeceeecCeEEEEcc-CCCCccceeEEeEEccCCe-----eee----------cCcCCCceEEEccCccEEEEeE
Q psy5692 11 INVNYEHNVILGNTAVLRCQ-IPSYMSEYIIVTSWIQDDV-----NIY----------LNTDTGGKYVVLSSGDLYVQIR 74 (98)
Q Consensus 11 v~V~d~~~VirGNtAVLkC~-IPs~V~d~V~V~SW~~Dd~-----~I~----------p~~~~dgKY~vlpsGeL~Ir~v 74 (98)
++.... .|..|..|+|.|+ .|. + ....+|.+.+. .|. +.....||+.++|+|.|.|+||
T Consensus 5 i~~~p~-~~~~G~~v~L~~~~~p~---~-~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nv 79 (111)
T 2qsq_A 5 IESTPF-NVAEGKEVLLLVHNLPQ---H-LFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNI 79 (111)
T ss_dssp EEEESS-EEETTSCEEEEEESCCS---S-EEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSC
T ss_pred EEeccc-eeccCCCEEEEEeCCCC---C-ceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccC
Confidence 334444 7889999999997 563 3 66789988762 221 2223579999999999999999
Q ss_pred eeecCC
Q psy5692 75 LSITGN 80 (98)
Q Consensus 75 ~~~~~n 80 (98)
+.+|.-
T Consensus 80 t~~D~G 85 (111)
T 2qsq_A 80 IQNDAG 85 (111)
T ss_dssp CGGGCE
T ss_pred cccCCe
Confidence 988864
No 3
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.19 E-value=1e-06 Score=64.14 Aligned_cols=65 Identities=38% Similarity=0.722 Sum_probs=54.2
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeee-ecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI-YLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I-~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
... .+..|.+++|.|.++.+-.+......|.+++..+ .+....++||.+.++|.|.|++++.+|.
T Consensus 111 ~~~-~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 176 (388)
T 2v5m_A 111 NKE-HVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDG 176 (388)
T ss_dssp CCE-EEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGG
T ss_pred cce-eeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCcccc
Confidence 344 6789999999999998877777889999999444 4444568999999999999999999885
No 4
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=97.94 E-value=7.5e-06 Score=50.51 Aligned_cols=54 Identities=26% Similarity=0.420 Sum_probs=44.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-.. ..|.+++..|.+ ++||.+..+|. |.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~~~p~~----v~W~k~~~~l~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (103)
T 2e7b_A 19 EVLEGGAATLRCVLSSVAAP----VKWCYGNNVLRP----GDKYSLRQEGAMLELVVRNLRPQDS 75 (103)
T ss_dssp EEESSSCEEEEEECSSCCCS----CEEEESSSBCCC----SSSEEEEECSSEEEEEECSCCTTTC
T ss_pred EEECCCcEEEEEEEeCCCCC----eEEEECCEECCC----CCcEEEEEcCCEEEEEEccCCcccC
Confidence 57789999999998755444 789999876643 57999999997 99999998775
No 5
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.80 E-value=2.6e-05 Score=52.86 Aligned_cols=60 Identities=17% Similarity=0.180 Sum_probs=43.9
Q ss_pred ceeecCeEEEEc-cCCCCccceeEEeEEccCCeeee------cCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRC-QIPSYMSEYIIVTSWIQDDVNIY------LNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC-~IPs~V~d~V~V~SW~~Dd~~I~------p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.++.|.+++|.| .+|. ..-.....|.+++..|. +....++||.++++|.|.|++++.+|.
T Consensus 7 ~~~~G~~v~L~c~~~~~--~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~ 73 (176)
T 1hng_A 7 WGALGHGINLNIPNFQM--TDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDS 73 (176)
T ss_dssp EEETTSCEEECCTTCCC--CTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGC
T ss_pred EEEcCCcEEEcCCCCCc--ccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccC
Confidence 467999999999 4441 12344678999985443 111247899999999999999998875
No 6
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=97.77 E-value=1.6e-05 Score=49.98 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=44.5
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.+. .|..|.+|.|.|.+... . ....|++|+..|.+ ++||.+..+| .|.|++++.+|.
T Consensus 13 ~~~-~v~~G~~v~l~C~v~~~--~--~~v~W~k~g~~i~~----~~~~~i~~~g~~~~L~I~~v~~~D~ 72 (93)
T 1waa_A 13 YGV-EVFVGETAHFEIELSEP--D--VHGQWKLKGQPLAA----SPDCEIIEDGKKHILILHNCQLGMT 72 (93)
T ss_dssp CCE-EEETTSCEEEEEEESSS--S--CCCEEEETTEECCC----BTTEEEEEETTEEEEEECSCCGGGC
T ss_pred cce-EEeCCCCEEEEEEECCC--C--CeEEEEECCEECcC----CCCEEEEEECCEEEEEECCCChhhC
Confidence 344 67799999999998532 2 24789999987765 5789888877 699999998874
No 7
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=97.70 E-value=4.4e-05 Score=49.53 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=48.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee--e-cC------cCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI--Y-LN------TDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I--~-p~------~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.+|+|.|.+... ..-.....|.+++..+ | +. ....||+.+.+++.|.|++++.+|. ..=.|.+
T Consensus 14 ~~~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~--G~Y~C~v 90 (117)
T 3q0h_A 14 SAEKGGSIILQCHLSST-TAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDT--GEYFCIY 90 (117)
T ss_dssp EEETTCCEEECEEEESC-CCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGC--EEEEEEE
T ss_pred EEecCCCEEEEEEecCC-CCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhC--EEEEEEE
Confidence 56789999999998654 3345578999987322 3 11 1236899888899999999998884 3344443
No 8
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=5.4e-05 Score=47.76 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=47.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+..+-. ....|.+++..|.. .+++|.+..+|.|.|++++.+|. ..-.|..
T Consensus 19 ~v~~G~~v~l~C~~~g~p~---p~i~W~k~g~~~~~---~~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 81 (118)
T 2eo9_A 19 TVAVDGTFVLSCVATGSPV---PTILWRKDGVLVST---QDSRIKQLENGVLQIRYAKLGDT--GRYTCIA 81 (118)
T ss_dssp EEETTCEEEEECBCCCSSC---CEEEEEESSSBCCT---TSTTEEEEETTEEEEESCCGGGC--CCEEEEE
T ss_pred EEcCCCeEEEEEEEEecCC---CEEEEEECCEECcC---CCCeEEEccCCEEEEccCCcCCC--EEEEEEE
Confidence 5678999999999854333 34789999866643 46899999999999999998874 3344543
No 9
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=97.69 E-value=4.7e-05 Score=48.67 Aligned_cols=62 Identities=19% Similarity=0.286 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccCC-------eeee-c--------CcCCCceEEEccCc-------------
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQDD-------VNIY-L--------NTDTGGKYVVLSSG------------- 67 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~Dd-------~~I~-p--------~~~~dgKY~vlpsG------------- 67 (98)
.+..|.+|+|.|.+.+.... -.....|.+.+ ..+| + .....||+.+.+++
T Consensus 13 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~ 92 (128)
T 3r0n_A 13 RGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQD 92 (128)
T ss_dssp ECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSB
T ss_pred EEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCC
Confidence 56789999999998654433 55567899862 1222 1 01245899887765
Q ss_pred -cEEEEeEeeecC
Q psy5692 68 -DLYVQIRLSITG 79 (98)
Q Consensus 68 -eL~Ir~v~~~~~ 79 (98)
.|.|++++.+|.
T Consensus 93 ~sL~I~~v~~~D~ 105 (128)
T 3r0n_A 93 ATLALHGLTVEDE 105 (128)
T ss_dssp CCEEECSCCGGGC
T ss_pred eEEEEccCCchhC
Confidence 899999999885
No 10
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=2.1e-05 Score=49.79 Aligned_cols=53 Identities=25% Similarity=0.451 Sum_probs=41.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+|.|.|.+ . .-.. ..|++|+..|.+ ++||.+..+| .|.|++++.+|.
T Consensus 18 ~v~~G~~v~l~C~v--~--p~p~-v~W~k~g~~l~~----~~r~~i~~~~~~~~L~I~~v~~~D~ 73 (100)
T 2yuz_A 18 TVNLGKEICLKCEI--S--ENIP-GKWTKNGLPVQE----SDRLKVVQKGRIHKLVIANALTEDE 73 (100)
T ss_dssp EEETTSCCCEEEEC--S--SCCC-EEEEETTEECCC----CSSEEEEECSSEEEEEESSCCGGGC
T ss_pred EEcCCCCEEEEEEe--C--CCCe-EEEEECCEECCC----CCcEEEEEeCCEEEEEECCCChhhC
Confidence 56789999999998 1 2222 469999987755 6799998887 599999998874
No 11
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.67 E-value=3.9e-05 Score=46.83 Aligned_cols=63 Identities=14% Similarity=0.217 Sum_probs=47.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...-.- ...|.+++..+.. .+++|.+..+|.|.|++++.+|. ..-.|.+
T Consensus 19 ~v~~G~~~~l~C~~~g~p~p---~v~W~~~~~~~~~---~~~~~~~~~~~~L~i~~v~~~d~--G~Y~C~a 81 (100)
T 2edj_A 19 TLAVDGTALLKCKATGDPLP---VISWLKEGFTFPG---RDPRATIQEQGTLQIKNLRISDT--GTYTCVA 81 (100)
T ss_dssp EEESSSEEEECCEEECSSCC---EEEEEESSSEESS---SCSSCEECTTCCEEEESCCTTTC--CEEEEEE
T ss_pred EEcCCCcEEEEEEEEEcCCC---EEEEEECCEECCC---CCCCEEEcCCCEEEEccCCcccC--EEEEEEE
Confidence 56789999999997543332 3789999866643 46789999999999999998774 3345544
No 12
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=2.9e-05 Score=51.86 Aligned_cols=64 Identities=19% Similarity=0.317 Sum_probs=48.5
Q ss_pred EEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCc-------eEEEccCc---cEEEEeEeeecCC
Q psy5692 11 INVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGG-------KYVVLSSG---DLYVQIRLSITGN 80 (98)
Q Consensus 11 v~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dg-------KY~vlpsG---eL~Ir~v~~~~~n 80 (98)
...+|. .|..|.+|+|.|.+.. ..-..|++|+..|.++. ..+ ||.+...| .|.|++++.+|.=
T Consensus 13 ~~l~d~-~v~eG~~a~f~C~vs~-----~p~v~W~knG~~l~~~~-~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G 85 (112)
T 2e6q_A 13 AGLEDV-QVYDGEDAVFSLDLST-----IIQGTWFLNGEELKSNE-PEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSG 85 (112)
T ss_dssp ECCCCE-EEETTCEEEEEEEESS-----CCCCEEEESSCBCCSSC-CCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCS
T ss_pred cCCCCe-EEcCCCcEEEEEEECC-----CCeEEEEECCEECccCc-ccccccccccEEEEEeCCcEEEEEECCCCHHHCc
Confidence 334566 7889999999999874 22366999998886631 123 99999888 6999999988764
Q ss_pred c
Q psy5692 81 L 81 (98)
Q Consensus 81 ~ 81 (98)
.
T Consensus 86 ~ 86 (112)
T 2e6q_A 86 A 86 (112)
T ss_dssp E
T ss_pred c
Confidence 3
No 13
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=97.62 E-value=2.8e-05 Score=48.74 Aligned_cols=63 Identities=19% Similarity=0.298 Sum_probs=47.6
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+. .+..|.++.|.|.+... ....|.+++..|.+ ++||.+..+| .|.|++++.+|.- .-.|..
T Consensus 27 ~~~-~v~~G~~v~l~C~~~~~-----p~v~W~k~~~~l~~----~~~~~~~~~~~~~~L~I~~v~~~D~G--~Y~C~a 92 (113)
T 2edh_A 27 RNE-EATEGATAVLRCELSKM-----APVEWWKGHETLRD----GDRHSLRQDGARCELQIRGLVAEDAG--EYLCMC 92 (113)
T ss_dssp CCC-EECTTSCEEEEEEESSC-----CCCEEEESSSBCCC----SSSEEEEEETTEEEEEECSCCSTTCE--EEEEEE
T ss_pred Cce-EEeCCCeEEEEEEECCC-----CcEEEEECCEECCC----CCcEEEEECCCEEEEEECCCChhhCE--EEEEEe
Confidence 444 67889999999998653 23579999976644 5899999999 7999999987753 344443
No 14
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.60 E-value=4.7e-05 Score=46.83 Aligned_cols=54 Identities=19% Similarity=0.239 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+. .-.. ...|.+++..|.+ +.||.+..+| .|.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~-~p~~---~v~W~k~~~~l~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (103)
T 2dku_A 19 QVEEKGTAVFTCKTE-HPAA---TVTWRKGLLELRA----SGKHQPSQEGLTLRLTISALEKADS 75 (103)
T ss_dssp EEETTSEEEEEEECS-SCCS---CCEEEESSCBCCS----SSSEEEEEETTEEEEEEESCCTTTC
T ss_pred EEeCCCcEEEEEEeC-CCCC---eEEEEeCCEECCC----CCeEEEEeCCCEEEEEECCCCcccC
Confidence 577899999999953 2222 4579999977654 5699998888 799999998775
No 15
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.59 E-value=1.8e-05 Score=50.20 Aligned_cols=59 Identities=12% Similarity=0.200 Sum_probs=44.6
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.+. .|..|.+|.|.|.+...-.. ....|++|+..|.+ ++||.+..+| .|.|++++.+|.
T Consensus 16 ~~~-~v~~G~~v~l~C~v~~~~~~--~~v~W~k~g~~i~~----~~r~~~~~~~~~~~L~I~~v~~~D~ 77 (104)
T 2eny_A 16 KTM-EVLEGESCSFECVLSHESAS--DPAMWTVGGKTVGS----SSRFQATRQGRKYILVVREAAPSDA 77 (104)
T ss_dssp CCE-EEESSCCEEEEEECSSCCCS--SCBCCBSSSSBCSB----CSSCEEEEETTEEEEEECSCCTTTC
T ss_pred CCc-EEcCCCcEEEEEEEcCCCCC--ceeEEEECCEECCC----CCCEEEEEcCCEEEEEECCCCHHHC
Confidence 344 67799999999998644322 13569999977765 5689888777 599999998875
No 16
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=97.59 E-value=2e-05 Score=48.91 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+... ....|.+++..|.+ ++||.+..+|. |.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~~~-----p~v~W~k~~~~~~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 74 (108)
T 2dm7_A 19 EASEGATATLQCELSKV-----APVEWKKGPETLRD----GGRYSLKQDGTRCELQIHDLSVADA 74 (108)
T ss_dssp EEETTSCEEEEEEBSSS-----CCCEEESSSSBCCS----SSSCEEEEETTEEEEEESSCCTTTC
T ss_pred EEeCCCcEEEEEEeCCC-----CeeEEEECCEECCC----CCCEEEEecCCEEEEEECCCCcccC
Confidence 57789999999998644 23579999876643 68999999998 99999998874
No 17
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.56 E-value=6.3e-05 Score=49.43 Aligned_cols=69 Identities=13% Similarity=0.117 Sum_probs=46.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeec-----------CcCCCceEEEc----------cCccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYL-----------NTDTGGKYVVL----------SSGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p-----------~~~~dgKY~vl----------psGeL~Ir~v~ 75 (98)
.+..|.+|+|.|.+.....+.+....|.+++ ..+.. .....+++... .+|.|.|++++
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 91 (225)
T 4fmk_A 12 RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLR 91 (225)
T ss_dssp EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCC
T ss_pred EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCC
Confidence 3568999999999877777777778999987 33211 11123444443 24679999999
Q ss_pred eecCCcceeeeee
Q psy5692 76 SITGNLSVKKMKV 88 (98)
Q Consensus 76 ~~~~n~~~~~~~~ 88 (98)
.+|+ ..-.|.+
T Consensus 92 ~~D~--G~Y~C~~ 102 (225)
T 4fmk_A 92 VEDE--GNYTCEF 102 (225)
T ss_dssp GGGC--EEEEEEE
T ss_pred HHHC--cceEEEE
Confidence 8874 4455554
No 18
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.54 E-value=2.6e-05 Score=48.52 Aligned_cols=57 Identities=14% Similarity=0.246 Sum_probs=44.2
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.+. .|..|.++.|.|.+...-. . ..|++++..|.+ +++|.+..+| .|.|++++.+|.
T Consensus 16 ~~~-~v~~G~~v~l~C~~~~~~~---~-v~W~k~g~~~~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (106)
T 2dlt_A 16 ADL-TVKAAEQAVFKCEVSDEKV---T-GKWYKNGVEVRP----SKRITISHVGRFHKLVIDDVRPEDE 75 (106)
T ss_dssp CCE-EEESSCCEECCCEESCSSC---E-EEEEESSCBCCC----CSSCEEEEETTEEEEEESSCCTTTC
T ss_pred CCe-EEeCCCeEEEEEEEcCCCc---c-eEEEcCCEECcC----CCCEEEEEeCCEEEEEECCCCcCCC
Confidence 344 6789999999999864332 3 789999977654 5688888777 899999988775
No 19
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=97.53 E-value=9.1e-05 Score=46.15 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=44.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+.. -. . -..|++|+..|.+ +++|.+...| .|.|++++.+|. ..-.|..
T Consensus 7 ~~~~G~~v~l~C~vs~-p~--p-~v~W~k~g~~l~~----~~~~~~~~~~~~~~L~I~~~~~~D~--G~Y~C~a 70 (84)
T 2lu7_A 7 RSTPGGDLELVVHLSG-PG--G-PVRWYKDGERLAS----QGRVQLEQAGARQVLRVQGARSGDA--GEYLCDA 70 (84)
T ss_dssp EECTTSCEEEECCCSC-CS--T-TCEEEETTEECCC----CSSEEEEECSSCEEEEESSCSSTTC--EEEEEEC
T ss_pred EEecCCCEEEEEEECC-CC--c-EEEEEECCEEccc----cccEEEeecCCeEEEEecCCCCccc--EEEEEEE
Confidence 4568999999999843 11 1 2479999988865 6788888776 499999988764 3445544
No 20
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=97.49 E-value=0.00014 Score=44.19 Aligned_cols=52 Identities=21% Similarity=0.313 Sum_probs=40.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+.. + ....|.+++..+.+ ++++.+ .+|.|.|.+++.+|.
T Consensus 12 ~v~~G~~~~l~C~~~~---~--p~v~W~k~g~~~~~----~~~~~~-~~~~L~i~~~~~~D~ 63 (95)
T 4hwu_A 12 VVAPGESLELQCMLKD---A--AVISWTKDGVHLGP----NNRTVL-IGEYLQIKGATPRDS 63 (95)
T ss_dssp EECTTSCEEEECCCCT---T--CEEEEEETTEEECC----CSSEEE-ETTEEEECSCCGGGC
T ss_pred EECCCCEEEEEEEeCC---C--CEEEEEECCEECCC----CceEEE-eCCEEEECcCCcccC
Confidence 6789999999999864 1 35789999977744 467776 478999999988774
No 21
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=97.45 E-value=0.00014 Score=44.19 Aligned_cols=69 Identities=13% Similarity=0.185 Sum_probs=47.1
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCe-eeecCc---CCCceEEEc----cCccEEEEeEeeecCCcceee
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV-NIYLNT---DTGGKYVVL----SSGDLYVQIRLSITGNLSVKK 85 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~-~I~p~~---~~dgKY~vl----psGeL~Ir~v~~~~~n~~~~~ 85 (98)
.+. .|..|.+|+|.|.+...- .....|.+++. .++... ..++||.+. .++.|.|++++.+|. ..-.
T Consensus 14 ~~~-~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~--G~Y~ 87 (108)
T 3m45_A 14 QNV-TVVEGGTAILTCRVDQND---NTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE--GQYT 87 (108)
T ss_dssp CCE-EEETTSCEEEEEEESSCS---SCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC--EEEE
T ss_pred Cee-EEEeCCcEEEEeEEcCCC---ccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC--eEEE
Confidence 344 677999999999986543 23358999874 554322 146799886 467899999998874 3334
Q ss_pred eee
Q psy5692 86 MKV 88 (98)
Q Consensus 86 ~~~ 88 (98)
|.+
T Consensus 88 C~~ 90 (108)
T 3m45_A 88 CSL 90 (108)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 22
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=97.43 E-value=4.6e-05 Score=46.69 Aligned_cols=54 Identities=20% Similarity=0.304 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+ +.-. ....|++++..|.+ +++|.+..+| .|.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~-~~p~---~~v~W~k~~~~l~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (95)
T 2k1m_A 19 EVAAGSPAVFEAET-ERAG---VKVRWQRGGSDISA----SNKYGLATEGTRHTLTVREVGPADQ 75 (95)
T ss_dssp EEETTSCEEEEEEC-SSSS---CCCEEECSSSEECS----STTCEEEEETTEEEEEESSCCTTCC
T ss_pred EEeCCCcEEEEEEe-CCCC---CeEEEEECCEECCC----CCcEEEEEcCCEEEEEEcCCCcccC
Confidence 67799999999998 3222 24689999977755 4688888777 499999988764
No 23
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=97.41 E-value=0.00028 Score=45.07 Aligned_cols=63 Identities=13% Similarity=0.238 Sum_probs=46.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc----cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG----DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG----eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-.. ...|.+++..+.+ .++||.+..+| .|.|++++.+|. ..-.|.+
T Consensus 26 ~v~~G~~v~L~C~~~g~p~p---~v~W~k~~~~~~~---~~~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y~C~a 92 (116)
T 2kkq_A 26 KVLEGDSVKLECQISAIPPP---KLFWKRNNEMVQF---NTDRISLYQDNTGRVTLLIKDVNKKDA--GWYTVSA 92 (116)
T ss_dssp EEETTEEEEEEEEBCCBSCC---EEEEEETTEECCC---CBTTEEEEECTTCEEEEEEEEECGGGC--EEEEEEE
T ss_pred EEeCCCcEEEEEEEeccCCC---EEEEEECCEECcC---CCCeEEEEeCCCCeEEEEECCCCcccC--EEEEEEE
Confidence 67789999999998654333 5789999976644 35788888765 699999998874 3344443
No 24
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.39 E-value=0.0001 Score=46.83 Aligned_cols=62 Identities=19% Similarity=0.316 Sum_probs=45.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+ +.-. ....|++++..|.+ .++||.+..+| .|.|++++.+|. ..-.|.+
T Consensus 27 ~v~~G~~v~L~C~~-~~p~---~~v~W~k~g~~l~~---~~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y~C~a 91 (104)
T 1pd6_A 27 QVSKGHKIRLTVEL-ADHD---AEVKWLKNGQEIQM---SGSKYIFESIGAKRTLTISQCSLADD--AAYQCVV 91 (104)
T ss_dssp EEETTSCEEEEEEC-SSSS---SCCEEEESSSEECC---CSSSSEEEEETTEEEEEECSCSSSSC--EEEEEEE
T ss_pred EEecCCCEEEEEEE-cCCC---CEEEEEECCEECCC---CCCeEEEEecCCEEEEEECCCCcccC--EEEEEEE
Confidence 46789999999998 3221 12689999977755 23799988888 899999988775 3334444
No 25
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=97.38 E-value=0.00022 Score=43.74 Aligned_cols=62 Identities=13% Similarity=0.239 Sum_probs=42.7
Q ss_pred ceeecCeEEEEccC-CCCccce-eEEeEEccCC----eeeecCc-----CCCceEEEcc--------CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQI-PSYMSEY-IIVTSWIQDD----VNIYLNT-----DTGGKYVVLS--------SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~I-Ps~V~d~-V~V~SW~~Dd----~~I~p~~-----~~dgKY~vlp--------sGeL~Ir~v~~~~ 78 (98)
.+..|.+|+|.|.+ ++..... .....|.+++ ..+|... ...+|+.+.+ ++.|.|++++.+|
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 90 (118)
T 3udw_C 11 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVED 90 (118)
T ss_dssp EEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGG
T ss_pred EEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHH
Confidence 45689999999998 5443333 5567899874 2222111 1267888877 7799999999887
Q ss_pred C
Q psy5692 79 G 79 (98)
Q Consensus 79 ~ 79 (98)
.
T Consensus 91 ~ 91 (118)
T 3udw_C 91 E 91 (118)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=97.37 E-value=8.4e-05 Score=46.94 Aligned_cols=60 Identities=15% Similarity=0.249 Sum_probs=44.0
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
++.|.+++|.|.+..- + .. ..|++|+..|.+ +++|.+..+| .|.|++++.+|. ..-.|..
T Consensus 18 ~~~g~~v~l~C~v~~p--~-~~-v~W~k~g~~i~~----~~~~~i~~~~~~~~L~I~~v~~~D~--G~Y~C~a 80 (91)
T 2lvc_A 18 AITSECVMLACEVDRE--D-AP-VRWYKDGQEVEE----SDFVVLENEGPHRRLVLPATQPSDG--GEFQCVA 80 (91)
T ss_dssp CCTTCCEEEEEECSCT--T-SC-CEEEETTSCCCC----CSSCEEEEETTEEEEEESSCCGGGC--SEEEEEC
T ss_pred EECCCcEEEEEEECCC--C-cE-EEEEECCEEeee----eeeeeEEecCCeEEEEeCCCChhhc--EEEEEEE
Confidence 3479999999998431 1 22 479999977755 5788888877 599999998874 3455554
No 27
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=97.35 E-value=0.00013 Score=44.06 Aligned_cols=63 Identities=13% Similarity=0.192 Sum_probs=45.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+..+-. ....|.+++..|.+ .+.+|.+..+| .|.|++++.+|. ..-.|..
T Consensus 16 ~v~~G~~v~l~C~~~g~p~---p~v~W~k~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~D~--G~Y~C~a 81 (99)
T 1u2h_A 16 SVREGQDVIMSIRVQGEPK---PVVSWLRNRQPVRP---DQRRFAEEAEGGLCRLRILAAERGDA--GFYTCKA 81 (99)
T ss_dssp EEETTCCEEEEEEEEEESC---CEEEEEETTEECCC---BTTEEEEECGGGEEEEEESSCCGGGC--EEEEEEE
T ss_pred EecCCCEEEEEEEEEEcCC---CEEEEEECCEECCC---CCCEEEEECCCCEEEEEEccCCcCCC--EEEEEEE
Confidence 5778999999999743322 25789999977654 35678887777 499999988774 3344543
No 28
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=97.33 E-value=0.0003 Score=48.95 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=43.3
Q ss_pred ceeecCeEEEEcc-CCCCccceeEEeEEcc--CCeeee---cCc---CCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQ-IPSYMSEYIIVTSWIQ--DDVNIY---LNT---DTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~-IPs~V~d~V~V~SW~~--Dd~~I~---p~~---~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|. +|. ..-.....|.+ ++..|. +.. ..++||.++++|.|.|++++.+|.
T Consensus 10 ~g~~G~sv~L~~~~~~~--~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~Ds 78 (182)
T 1hnf_A 10 WGALGQDINLDIPSFQM--SDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQ 78 (182)
T ss_dssp EEETTSCEEECCTTCCC--CSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGC
T ss_pred EEecCCCEEEeCCcccc--cCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhC
Confidence 5679999999994 221 12356789999 775552 100 147899999999999999998775
No 29
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.33 E-value=0.00012 Score=47.80 Aligned_cols=62 Identities=19% Similarity=0.287 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee-----ec---------CcCCCceEEEcc------CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI-----YL---------NTDTGGKYVVLS------SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I-----~p---------~~~~dgKY~vlp------sGeL~Ir~v~~~ 77 (98)
.|+.|.+|.|.|.+.....+-+....|.+++..+ +. .....||+...+ ++.|.|++++.+
T Consensus 10 tv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 89 (218)
T 4frw_A 10 TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA 89 (218)
T ss_dssp EEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGG
T ss_pred EEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHH
Confidence 4678999999999977777777778999876211 10 112345665543 356999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 90 D~ 91 (218)
T 4frw_A 90 DE 91 (218)
T ss_dssp GC
T ss_pred HC
Confidence 74
No 30
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.29 E-value=9.2e-05 Score=45.57 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-.. ..|++++..|.+ +++|.+..+|. |.|++++.+|.
T Consensus 21 ~v~~G~~v~l~C~~~~~p~~----v~W~k~g~~~~~----~~~~~~~~~~~~~~L~I~~~~~~D~ 77 (104)
T 2e6p_A 21 TFTTSERVVLTCELSRVDFP----ATWYKDGQKVEE----SELLVVKMDGRKHRLILPEAKVQDS 77 (104)
T ss_dssp EEESSSCEECCEECSSTTCC----CEEEETTEECCC----BTTBEEEEETTEEEEEESSCCTTTC
T ss_pred EEeCCCcEEEEEEecCCCCc----cEEeeCCEECCC----CCCEEEEeCCCEEEEEECCCChhhC
Confidence 45689999999998655443 489999977644 46888877664 99999888774
No 31
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.28 E-value=0.00019 Score=44.29 Aligned_cols=56 Identities=13% Similarity=0.294 Sum_probs=41.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps---GeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+.. .. ....|++++..|.+.. ..||.+..+ +.|.|++++.+|.
T Consensus 18 ~v~~G~~v~l~C~~~~--~~--~~v~W~k~g~~l~~~~--~~~~~~~~~~~~~~L~I~~~~~~D~ 76 (103)
T 1x44_A 18 TAYCGERVELECEVSE--DD--ANVKWFKNGEEIIPGP--KSRYRIRVEGKKHILIIEGATKADA 76 (103)
T ss_dssp EEETTEEEEEEEECSS--SS--CCCEEEETTEECCCST--TCSEEEEEETTEEEEEEEEECTTTC
T ss_pred EEECCCCEEEEEEecC--CC--CeEEEEECCEECCCCC--ceEEEEEEcCCEEEEEECCCCcccC
Confidence 5678999999999843 22 4568999998775521 118888866 5799999998875
No 32
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=97.27 E-value=0.00039 Score=42.46 Aligned_cols=70 Identities=13% Similarity=0.159 Sum_probs=44.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--------eeeecCc-----CCCceEEEcc-----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--------VNIYLNT-----DTGGKYVVLS-----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--------~~I~p~~-----~~dgKY~vlp-----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+.+.-..-.....|.+.+ ..++... ...+||.+.. ++.|.|++++.+|.
T Consensus 5 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~ 84 (109)
T 2oyp_A 5 KVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDH 84 (109)
T ss_dssp EECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGC
T ss_pred EEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhC
Confidence 4668999999999865432222336898864 2223211 1367888754 36899999998875
Q ss_pred Ccceeeeeeh
Q psy5692 80 NLSVKKMKVE 89 (98)
Q Consensus 80 n~~~~~~~~~ 89 (98)
..=.|.+.
T Consensus 85 --G~Y~C~v~ 92 (109)
T 2oyp_A 85 --GTYCCRIQ 92 (109)
T ss_dssp --EEEEEEEC
T ss_pred --eEEEEEEE
Confidence 34455544
No 33
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=97.24 E-value=0.00026 Score=43.22 Aligned_cols=60 Identities=15% Similarity=0.284 Sum_probs=44.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...- ....|.+++..|.+ ++|+.+. +|.|.|++++.+|. ..-.|..
T Consensus 20 ~v~~G~~v~l~C~~~g~p----p~i~W~k~g~~~~~----~~~~~~~-~~~L~i~~~~~~D~--G~Y~C~a 79 (95)
T 2ckn_A 20 LVHPGDLLQLRCRLRDDV----QSINWLRDGVQLVE----SNRTRIT-GEEVEVRDSIPADS--GLYACVT 79 (95)
T ss_dssp EECTTSCEEEECCEESSC----CEEEEEBTTBCCCC----CSSEEEC-SSEEEESSCCGGGS--EEEEEEE
T ss_pred EEcCCCeEEEEEECCCCC----CceEEEECCEecCC----CCCEEEe-CCEEEECCCChHHC--EEEEEEe
Confidence 566899999999986542 25789998876644 5687765 88999999998774 3444543
No 34
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=97.22 E-value=0.00014 Score=44.45 Aligned_cols=62 Identities=18% Similarity=0.304 Sum_probs=45.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.- ...|.+++..|.+ +++|.+..+| .|.|.+++.+|. ..-.|.+
T Consensus 24 ~v~~G~~v~l~C~~~g~p~p---~i~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~D~--G~Y~C~a 88 (107)
T 3irg_B 24 RVVSGAEAELKCVVLGEPPP---VVVWEKGGQQLAA----SERLSFPADGAEHGLLLTAALPTDA--GVYVCRA 88 (107)
T ss_dssp EEETTSCEEEEEEEEEESCC---EEEEEETTEECCC----CSSEECCEETTEEEEEESSCCGGGC--EEEEEEE
T ss_pred EEeCCCeEEEEEEEeecCCC---EEEEEECCeECCC----CCcEEEEeCCCEEEEEEccCCHHhC--EEEEEEE
Confidence 56789999999997533322 5689999876643 5799998888 799999988773 3444543
No 35
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.21 E-value=5.5e-05 Score=46.64 Aligned_cols=58 Identities=12% Similarity=0.253 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...- ....|++++..|.++....+||.+..+|. |.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~~~~----~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 79 (101)
T 2edk_A 19 QVFVGDRVEMAVEVSEEG----AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDR 79 (101)
T ss_dssp EEESSCCCBCCEEESCSS----CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGC
T ss_pred EEcCCCCEEEEEEEeCCC----CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhC
Confidence 677999999999986432 34689999977755322223888887774 99999988775
No 36
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=97.20 E-value=0.00031 Score=45.44 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=45.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----ee--eecCc-------CCCceEEEcc------CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VN--IYLNT-------DTGGKYVVLS------SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~--I~p~~-------~~dgKY~vlp------sGeL~Ir~v~~~ 77 (98)
.|+.|.+|+|.|.+++...+-+....|.+.+ .. ++... ...||..+.+ ++.|.|+|++.+
T Consensus 11 tv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 90 (123)
T 4gjt_B 11 TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA 90 (123)
T ss_dssp ECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSS
T ss_pred EEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChH
Confidence 4678999999999877766666777898753 11 11111 1246776643 346999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..=.|.+
T Consensus 91 Ds--G~Y~C~v 99 (123)
T 4gjt_B 91 DE--GEYECRV 99 (123)
T ss_dssp SC--SEEEEEE
T ss_pred HC--EEEEEEE
Confidence 75 3444544
No 37
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.20 E-value=0.0004 Score=47.33 Aligned_cols=60 Identities=18% Similarity=0.261 Sum_probs=42.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee--e-cCc-----------CCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI--Y-LNT-----------DTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I--~-p~~-----------~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.+|+|.|.++.. .-+....|.+++..| + +.. ...+|+.++++|.|.|++++.+|.
T Consensus 9 ~~~~G~~v~L~C~~~~~--~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 9 NGILGESVTLPLEFPAG--EKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDT 82 (193)
T ss_dssp EEETTSCEEECCCCCCC--SCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGC
T ss_pred EEEecCeEEEeccCCCc--ccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccC
Confidence 56789999999998632 123357899986333 2 211 012588888999999999998875
No 38
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=97.20 E-value=0.00043 Score=42.44 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=45.8
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccCC-------eee--ec--------CcCCCceEEEccC------ccEEEEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQDD-------VNI--YL--------NTDTGGKYVVLSS------GDLYVQI 73 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~Dd-------~~I--~p--------~~~~dgKY~vlps------GeL~Ir~ 73 (98)
.+..|.+++|.|.+...-.+ ......|.+.+ ..+ |. .....+|+.+.++ +.|.|++
T Consensus 16 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 95 (126)
T 1eaj_A 16 EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTN 95 (126)
T ss_dssp EEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECS
T ss_pred EEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECc
Confidence 46689999999998544332 22457888764 222 22 1234689998876 8899999
Q ss_pred EeeecCCcceeeeee
Q psy5692 74 RLSITGNLSVKKMKV 88 (98)
Q Consensus 74 v~~~~~n~~~~~~~~ 88 (98)
++.+|. ..-.|.+
T Consensus 96 v~~~D~--G~Y~C~v 108 (126)
T 1eaj_A 96 LQLSDI--GTYQCKV 108 (126)
T ss_dssp CCGGGC--EEEEEEE
T ss_pred CChHHC--eEEEEEE
Confidence 998874 3445544
No 39
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.19 E-value=0.00068 Score=44.94 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=47.2
Q ss_pred EeeeeceeecCeEEEEccCCCCccceeEEeEEccCCe-----ee----------ecCcCCCceEEEccCccEEEEeEeee
Q psy5692 13 VNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV-----NI----------YLNTDTGGKYVVLSSGDLYVQIRLSI 77 (98)
Q Consensus 13 V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~-----~I----------~p~~~~dgKY~vlpsGeL~Ir~v~~~ 77 (98)
.... .|..|.+++|.|...+.- .....|.+++. .| .+.....||+.++++|.|.|++++.+
T Consensus 6 ~~~~-~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~ 81 (208)
T 3r4d_A 6 AVPP-QVAEDNNVLLLVHNLPLA---LGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMK 81 (208)
T ss_dssp EESS-EEETTCCEEEEEECCCSS---CSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGG
T ss_pred Cccc-eeecCCcEEEEEeCCCCC---ceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccccc
Confidence 3344 788999999999953322 23568988742 11 12223578999999999999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 82 D~--G~Y~C~~ 90 (208)
T 3r4d_A 82 DM--GVYTLDM 90 (208)
T ss_dssp GC--EEEEEEE
T ss_pred CC--eEEEEEE
Confidence 74 2344444
No 40
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.16 E-value=0.00012 Score=44.81 Aligned_cols=54 Identities=22% Similarity=0.299 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+. . -.....|++++..|.+ +++|.+..+| .|.|++++.+|.
T Consensus 22 ~v~~G~~v~L~C~~~-~---p~~~v~W~k~g~~~~~----~~~~~~~~~~~~~~L~I~~~~~~D~ 78 (102)
T 2eo1_A 22 QAEAGASATLSCEVA-Q---AQTEVTWYKDGKKLSS----SSKVRVEAVGCTRRLVVQQAGQAEA 78 (102)
T ss_dssp EEETTCCEEECCBCS-C---SSSCCEEEETTEECCC----CSSEEEEEETTEEEEEETTCCTTTC
T ss_pred EEeCCCcEEEEEEec-C---CCCceEEEECCEECCC----CCCEEEEEcCCEEEEEECCCCcccC
Confidence 566899999999975 1 1234689999977644 4688888776 799999988775
No 41
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=97.16 E-value=0.00016 Score=44.48 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=40.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+. . . .....|++++..|.+ +++|.+..+|. |.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~-~--p-~~~v~W~k~g~~i~~----~~~~~~~~~~~~~~L~I~~~~~~D~ 75 (100)
T 2yuv_A 19 QVDKGGRVRFVVELA-D--P-KLEVKWYKNGQEIRP----STKYIFEHKGCQRILFINNCQMTDD 75 (100)
T ss_dssp EECTTEEEEEEEEES-C--T-TSCEEEEESSCBCCC----BTTEEEEEETTEEEEEEEEECTTTC
T ss_pred EEcCCCcEEEEEEec-C--C-CceEEEEECCEECCC----CCCEEEEecCCEEEEEEcCCCcCcC
Confidence 355899999999975 2 1 123689999976654 46898887774 99999988774
No 42
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.15 E-value=0.00016 Score=44.38 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=42.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+..-- ....|++++..|.+ +++|.+..+|. |.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~~~~----~~v~W~k~g~~~~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (103)
T 2edf_A 19 WVAPGEDVELRCELSRAG----TPVHWLKDRKAIRK----SQKYDVVCEGTMAMLVIRGASLKDA 75 (103)
T ss_dssp EECTTSCEEECCEESSSS----CCCCEEESSCBCCC----SSSEEEEEETTEEEEEESSCCTTTC
T ss_pred EEcCCCCEEEEEEEeCCC----CcEEEEECCEEccC----CCCEEEEECCCEEEEEECCCCcccC
Confidence 677999999999986311 13689999876644 56999988885 99999988874
No 43
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=97.14 E-value=0.00028 Score=46.34 Aligned_cols=64 Identities=13% Similarity=0.266 Sum_probs=47.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ..+|.+++..+.+. .+++|.+.++|.|.|.+++.+|. ..-.|..
T Consensus 107 ~~~~g~~~~l~C~~~g~p~p---~v~W~~~~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~--G~Y~C~a 170 (189)
T 2v44_A 107 EFKQGEDAEVVCRVSSSPAP---AVSWLYHNEEVTTI--SDNRFAMLANNNLQILNINKSDE--GIYRCEG 170 (189)
T ss_dssp EEETTSCEEECCEEECSSCC---EEEEEEEC--CEEC--CCTTEEECTTSCEEETTCCGGGC--EEEEEEE
T ss_pred EEeCCCCEEEEEEECcCCCC---cEEEEECCcEEecc--CCCCEEEecCCcEEEEEcCcccC--eEEEEEE
Confidence 56789999999998654433 46899998655331 36899999999999999998774 2445554
No 44
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=97.11 E-value=0.00044 Score=41.92 Aligned_cols=55 Identities=22% Similarity=0.292 Sum_probs=40.8
Q ss_pred ceeecCeEEEEccCCCC-ccceeEEeEEccCCeeeecCcCCCceEEEc-cCc--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSY-MSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-SSG--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-psG--eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+..+ -. ....|.+++..|.+ +++|.+. .+| .|.|++++..|.
T Consensus 12 ~v~~G~~v~l~C~~~g~~p~---~~v~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~D~ 70 (97)
T 2bk8_A 12 VGEEGGHVKYVCKIENYDQS---TQVTWYFGVRQLEN----SEKYEITYEDGVAILYVKDITKLDD 70 (97)
T ss_dssp EECTTCCEEEEEEEESCCTT---CEEEEEETTEECCS----SSSEEEEEETTEEEEEECSCCGGGC
T ss_pred EEcCCCcEEEEEEEeccCCC---CEEEEEECCEECcC----CCCEEEEEcCCeEEEEEecCChhhC
Confidence 45689999999997643 22 25689999976643 5788774 566 899999887764
No 45
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=97.10 E-value=0.00029 Score=46.16 Aligned_cols=65 Identities=17% Similarity=0.292 Sum_probs=49.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+.++-.. ..+|.+++..+.+. .+++|.+.++|.|.|.+++.+|. ..-.|...
T Consensus 111 ~~~~g~~~~l~C~~~g~p~~---~v~W~~~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a~ 175 (191)
T 1epf_A 111 EFKEGEDAVIVCDVVSSLPP---TIIWKHKGRDVILK--KDVRFIVLSNNYLQIRGIKKTDE--GTYRCEGR 175 (191)
T ss_dssp ECCTTSCEEECCEEECSSCC---EEEEEETTEEGGGG--CCTTEEECTTSCEEETTCCGGGC--EEEEEEEE
T ss_pred eecCCCeEEEEEEECCCCCC---EEEEEECCEEeecc--CCceEEEecCCeEEECCCChhhC--EEEEEEEE
Confidence 56789999999998654333 37899999766432 46799999999999999988774 34555543
No 46
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.10 E-value=0.00028 Score=44.49 Aligned_cols=64 Identities=11% Similarity=0.233 Sum_probs=45.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-.- ...|.+++..|.+. .++||.+..+| .|.|++++.+|. ..-.|.+
T Consensus 16 ~v~~G~~~~l~C~~~g~P~p---~v~W~k~g~~i~~~--~~~~~~~~~~~~~~~L~I~~~~~~D~--G~Y~C~a 82 (100)
T 3knb_A 16 SIDEGKVLTVACAFTGEPTP---EVTWSCGGRKIHSQ--EQGRFHIENTDDLTTLIIMDVQKQDG--GLYTLSL 82 (100)
T ss_dssp EEETTSEEEEEEEEEEESCC---EEEEEETTEECCTT--GGGTEEEEECSSEEEEEESSCCGGGC--EEEEEEE
T ss_pred EEeCCCeEEEEEEEEEecCC---EEEEEECceEeeee--ccceeeeecccceEEEEEcCCCccCC--EEEEEEE
Confidence 56789999999997433222 35799999877542 35789888766 599999888763 3455554
No 47
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=97.09 E-value=0.00033 Score=45.52 Aligned_cols=64 Identities=13% Similarity=0.255 Sum_probs=44.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-. ....|.+++..+.+. .+++|.+.++|.|.|.+++..|.- .-.|.+
T Consensus 13 ~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 76 (189)
T 2v5t_A 13 EFKQGEDAEVVCRVSSSPA---PAVSWLYHNEEVTTI--SDNRFAMLANNNLQILNINKSDEG--IYRCEG 76 (189)
T ss_dssp EEETTSCEEECCEEECSSC---CEEEEEC-----CBC--CCTTEEECTTSCEEETTCCGGGCE--EEEEEE
T ss_pred EEeCCCcEEEEEEEcCCCC---CEEEEEECCccceec--cCCeEEEecCCCEEEeeCCHhHCc--EEEEEE
Confidence 6778999999999864422 247899998665432 478999999999999999887753 445544
No 48
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.09 E-value=0.00027 Score=42.25 Aligned_cols=64 Identities=11% Similarity=0.216 Sum_probs=45.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC---ccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS---GDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps---GeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ....|.+++..+.+ ..+++|.+..+ +.|.|++++.+|. ..-.|.+
T Consensus 16 ~~~~G~~~~l~C~~~g~p~---p~v~W~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 82 (100)
T 3irg_A 16 SIDEGKVLTVACAFTGEPT---PEVTWSCGGRKIHS--QEQGRFHIENTDDLTTLIIMDVQKQDG--GLYTLSL 82 (100)
T ss_dssp EEETTSEEEEEEEEEEESC---CEEEEEETTEECCT--TGGGTEEEEECSSEEEEEESSCCGGGC--EEEEEEE
T ss_pred EEcCCCcEEEEEEEEEcCC---CceEEEECCEEeec--CCCCEEEEEecCCEEEEEEeecCcccC--EEEEEEE
Confidence 5668999999999743322 25789999876643 23679999876 6799999987773 3444543
No 49
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=97.07 E-value=0.00049 Score=41.67 Aligned_cols=66 Identities=17% Similarity=0.163 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+..+-. ....|.+++..+.+.............+.|.|++++..|. ..-.|.+
T Consensus 19 ~v~~G~~v~l~C~~~g~p~---p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 84 (100)
T 3caf_A 19 AVPAANTVKFRCPAGGNPM---PTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDK--GNYTCVV 84 (100)
T ss_dssp EECTTCCEEEECCEEEESC---CEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGC--EEEEEEE
T ss_pred EecCCCEEEEEEEccccCC---CEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCC--EEEEEEE
Confidence 4568999999999743322 2368999997775533333233334566899999988774 3455554
No 50
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.07 E-value=0.00067 Score=46.37 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=42.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC-Ceeee---cC-------cCCCceEEE-ccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD-DVNIY---LN-------TDTGGKYVV-LSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D-d~~I~---p~-------~~~dgKY~v-lpsGeL~Ir~v~~~~~ 79 (98)
.|+.|.+++|.|.... .+-.....|.+. +..|. +. ....||+.+ .++|.|.|++++..|.
T Consensus 10 ~v~~G~~vtL~c~~~~--~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~ 81 (180)
T 2dru_A 10 NAITGSNVTLTILKHP--LASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDR 81 (180)
T ss_dssp EEETTSCEEECCCSSC--CCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGC
T ss_pred EEEeCCCEEEeCCCCC--CCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHC
Confidence 5789999999999732 222446799994 33332 11 122389999 7899999999998875
No 51
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=97.06 E-value=0.00025 Score=45.47 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=46.2
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+. .|..|.++.|.|.+...-.- ...|++++..|.+ ++||.+..+| .|.|++++.+|. ..-.|..
T Consensus 21 ~~~-~v~~G~~~~l~C~~~G~P~p---~v~W~k~g~~l~~----~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y~C~a 88 (107)
T 3knb_B 21 RPV-RVVSGAEAELKCVVLGEPPP---VVVWEKGGQQLAA----SERLSFPADGAEHGLLLTAALPTDA--GVYVCRA 88 (107)
T ss_dssp CCE-EEETTSCEEEEEEEEEESCC---EEEEEETTEECCC----CSSEECCEETTEEEEEESSCCGGGC--EEEEEEE
T ss_pred CcE-EEeCCCcEEEEEEEEEecCC---EEEEEECcccccc----eeeEEEeecCceEEEEEecCChhhC--EEEEEEE
Confidence 344 67789999999997432221 3589999987754 5788888766 499999988774 3445544
No 52
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=97.05 E-value=0.00033 Score=42.10 Aligned_cols=62 Identities=18% Similarity=0.180 Sum_probs=44.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...-. ....|.+++..|.+ +++|.+..++ .|.|++++.+|. ..-.|.+
T Consensus 17 ~v~~G~~~~l~C~~~g~p~---p~v~W~~~g~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a 81 (99)
T 3puc_A 17 TVSSDSVAKFAVKATGEPR---PTAIWTKDGKAITQ----GGKYKLSEDKGGFFLEIHKTDTSDS--GLYTCTV 81 (99)
T ss_dssp EEESSSCEEEEEEEEEESC---CEEEEEETTEECCS----SSSEEEEEETTEEEEEECSCCGGGC--EEEEEEE
T ss_pred EEeCCCcEEEEEEEEecCC---CEEEEEECCEECcC----CCCEEEEEeCCEEEEEECCCCcccC--EEEEEEE
Confidence 6778999999999753322 24589999876644 5789888766 599999988773 3444544
No 53
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=97.05 E-value=0.00088 Score=43.60 Aligned_cols=68 Identities=21% Similarity=0.224 Sum_probs=46.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeee---------cCcCCCceEEEc-cCccEEEEeEeeecCCcceeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIY---------LNTDTGGKYVVL-SSGDLYVQIRLSITGNLSVKKM 86 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~---------p~~~~dgKY~vl-psGeL~Ir~v~~~~~n~~~~~~ 86 (98)
.|+.|.+++|.|..+.. .-.....|.+.. ..|. +.....||+.+. ++|.|.|+|++.+|. ..=.|
T Consensus 15 ~~~~G~~VtL~c~~~~~--~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~Ds--G~Y~c 90 (121)
T 2edo_A 15 TVVSGSNVTLNISESLP--ENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDN--STYIM 90 (121)
T ss_dssp EEETTSCEEECCSSCCC--SSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGC--SEEEE
T ss_pred EEEeCCCEEEeCCCCCC--CceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHC--eEEEE
Confidence 57799999999997321 224567898875 2332 112345788887 899999999999886 34555
Q ss_pred eeh
Q psy5692 87 KVE 89 (98)
Q Consensus 87 ~~~ 89 (98)
.+.
T Consensus 91 ~v~ 93 (121)
T 2edo_A 91 RVL 93 (121)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 54
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=97.03 E-value=0.00059 Score=50.61 Aligned_cols=57 Identities=25% Similarity=0.422 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|..|+...+ ...+|.+++..++. .+.+++...+|.|+|++++..|.
T Consensus 113 ~v~~G~~~~l~C~~~~~~~~--~~~~W~~~~~~~~~---~~~~~~~~~~~~L~I~~v~~~D~ 169 (384)
T 3kld_A 113 SVRRGQGMVLLCGPPPHSGE--LSYAWIFNEYPSYQ---DNRRFVSQETGNLYIAKVEKSDV 169 (384)
T ss_dssp EEEETCCEEECCCCCSEESC--EEEEEEETTEECCC---SSSEEECTTTCCEEESSCCGGGC
T ss_pred eEEcCCCeEEecCCCCCCCC--eEEEEEECCCCCEe---eccEEEEcCCCcEEEeecCHHHC
Confidence 56789999999987643322 46799999966543 34566667899999999988774
No 55
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.03 E-value=0.00024 Score=47.73 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=46.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe-----eeec----CcCCCceEE----------EccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV-----NIYL----NTDTGGKYV----------VLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~-----~I~p----~~~~dgKY~----------vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.++.|.|.+...-. .....|.+++. .|.+ .....+|+. +.++|.|.|++++..|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~D 88 (231)
T 2pet_A 11 EVMRGKSVILDCTPTGTHD--HYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGD 88 (231)
T ss_dssp EEETTCCEEECCCCBSCCS--EEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGGG
T ss_pred EEEcCCCEEEecccCCCCC--ceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCccc
Confidence 4668999999999865433 56789997652 2221 111245665 8888999999999887
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ..-.|.+.
T Consensus 89 ~--G~Y~C~~~ 97 (231)
T 2pet_A 89 E--RDYVCVVR 97 (231)
T ss_dssp C--EEEEEEEE
T ss_pred C--ceEEEEEE
Confidence 5 45666654
No 56
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=97.02 E-value=0.00056 Score=43.85 Aligned_cols=59 Identities=22% Similarity=0.290 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecC---cCCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLN---TDTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~---~~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...-. ...+|..++ ..++.. ...++||.+.. ++.|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 78 (124)
T 3rbg_A 12 TVEEGQTLTLKCVTSLRKN---SSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDE 78 (124)
T ss_dssp EEETTSCEEEEEECCCCTT---CEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGC
T ss_pred EEcCCCCEEEEeEEeccCC---CEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHC
Confidence 5668999999999865433 356898776 444421 12578888865 68999999998875
No 57
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=96.98 E-value=0.0016 Score=40.56 Aligned_cols=67 Identities=16% Similarity=0.215 Sum_probs=44.6
Q ss_pred ceeecCeEEEEccC-CCCccceeEEeEEccCC-eeee--c--------CcCCCceEEEc-cCccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQI-PSYMSEYIIVTSWIQDD-VNIY--L--------NTDTGGKYVVL-SSGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~I-Ps~V~d~V~V~SW~~Dd-~~I~--p--------~~~~dgKY~vl-psGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+ ++.- .....|.+++ ..|. . .....||+.+. .++.|.|++++.+|. ..=
T Consensus 14 ~~~~G~~v~L~C~~~~~~~---~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~Ds--G~Y 88 (110)
T 2ptt_A 14 NAYTGSNVTLKIHKDPLGP---YRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDK--GTY 88 (110)
T ss_dssp EEETTSCEEECSCSSCCCS---CSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGC--EEE
T ss_pred EEecCCcEEEeCCccCCCC---cCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccC--eEE
Confidence 46789999999998 4322 2357899854 3232 1 11234799887 689999999998875 444
Q ss_pred eeeeh
Q psy5692 85 KMKVE 89 (98)
Q Consensus 85 ~~~~~ 89 (98)
.|.+.
T Consensus 89 ~C~v~ 93 (110)
T 2ptt_A 89 YMRVL 93 (110)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 58
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=96.95 E-value=0.00056 Score=44.68 Aligned_cols=63 Identities=17% Similarity=0.328 Sum_probs=45.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc-EEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD-LYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe-L~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+.+.-. ....|.+++..+.+ .+++|.+.++|. |.|++++.+|.- .-.|.+
T Consensus 18 ~~~~G~~v~l~C~~~~~p~---~~i~W~~~~~~~~~---~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 81 (192)
T 2iep_A 18 DALVEEVATFMCAVESYPQ---PEISWTRNKILIKL---FDTRYSIRENGQLLTILSVEDSDDG--IYCCTA 81 (192)
T ss_dssp EEETTSCEEEECCEEEESC---CEEEEEETTEECCT---TCTTEEEEGGGTEEEESSCCGGGCE--EEEEEE
T ss_pred eeeCCCcEEEEeeCCCCCC---CeEEEEECCEEccc---cCccEEEcCCccEEEEcCCCcccCe--EEEEEE
Confidence 4678999999999853222 25689999876644 468999888776 889998877653 345544
No 59
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=96.94 E-value=0.00057 Score=41.57 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...-. ....|.+++..|.+ +++|.+..+| .|.|.+++.+|. ..-.|..
T Consensus 19 ~v~~G~~v~l~C~~~g~p~---p~i~W~k~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~D~--G~Y~C~a 83 (103)
T 3qp3_A 19 RVPCGQNTRFILNVQSKPT---AEVKWYHNGVELQE----SSKIHYTNTSGVLTLEILDCHTDDS--GTYRAVC 83 (103)
T ss_dssp EEETTCCEEEEEEEEEESC---CEEEEEETTEECCC----CSSEEEEEETTEEEEEECSCCGGGC--EEEEEEE
T ss_pred EEeCCCeEEEEEEEEecCC---CEEEEEECCEECCC----CCCEEEEECCCEEEEEEcCCCcccC--EEEEEEE
Confidence 6779999999999743222 25689999977654 4688887655 499999887774 3344443
No 60
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.89 E-value=0.0012 Score=40.75 Aligned_cols=56 Identities=14% Similarity=0.280 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc--Cc--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS--SG--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp--sG--eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+..+-. ....|++++..|.+ .+++|.+.. +| .|.|++++.+|.
T Consensus 19 ~v~~G~~v~l~C~~~g~p~---p~v~W~k~g~~~~~---~~~~~~~~~~~~~~~~L~i~~v~~~D~ 78 (110)
T 2dm2_A 19 KIFEGMPVTFTCRVAGNPK---PKIYWFKDGKQISP---KSDHYTIQRDLDGTCSLHTTASTLDDD 78 (110)
T ss_dssp EEETTCCEEEEEEBCCSSC---CEEEEECSSCBCCT---TCSSEEEEECTTCEEEEEESSCCTTTC
T ss_pred EEeCCCeEEEEEEEEecCC---CEEEEEECCEECCC---CCCeEEEEECCCcEEEEEECCCChhhC
Confidence 5678999999999864433 24789999876654 356787765 45 599999888774
No 61
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=96.87 E-value=0.00047 Score=43.10 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-. -...|++++..|.. +++|.+.. .+.|.|++++.+|.
T Consensus 18 ~v~~G~~v~l~C~~~g~p~---p~i~W~k~~~~~~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (114)
T 2cqv_A 18 KVRAGESVELFGKVTGTQP---ITCTWMKFRKQIQE----SEHMKVENSENGSKLTILAARQEHC 75 (114)
T ss_dssp EEETTCCEEEEEEEESSSS---CEEEEEESSSBCCC----SSSEEEEECSSEEEEEETTCCTTTC
T ss_pred EEeCCCeEEEEEEEEcCCC---CEEEEEECCEECcC----CCCEEEEEcCCEEEEEECCCChhcC
Confidence 5678999999999854322 23569999976643 45887764 46799999887764
No 62
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=96.87 E-value=0.00078 Score=50.64 Aligned_cols=57 Identities=23% Similarity=0.446 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+.. -.- ...|.+++..+......++||.+ ++|.|.|++|+.+|.
T Consensus 257 ~v~~G~~~~l~C~~~g-p~p---~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~ 313 (361)
T 2xot_A 257 EAHLGDTLTIRCDTKQ-QGM---TKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDG 313 (361)
T ss_dssp EEETTCCEEECCCCSS-TTC---EEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSC
T ss_pred eecCCCeEEEEeEeeC-CCC---eEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccC
Confidence 4678999999999854 222 24899987444343345679999 999999999998774
No 63
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=96.87 E-value=0.00046 Score=46.03 Aligned_cols=54 Identities=13% Similarity=0.183 Sum_probs=40.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+.+. ....|.++. ..|. ..++||.+..+|. |.|++++.+|.
T Consensus 28 ~v~~G~~v~L~C~~~~~-----~~v~W~r~~~g~~~~~l~---~~~~r~~~~~~~~~~~L~I~~~~~~Ds 89 (133)
T 3khq_A 28 AKKRSSMVKFHCYTNHS-----GALTWFRKRGSQQPQELV---SEEGRIVQTQNGSVYTLTIQNIQYEDN 89 (133)
T ss_dssp EECTTCCEEEEEEESSS-----SCEEEEEECTTSCCEECC---CTTTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEeCCCeEEEEEEeCCC-----CEEEEEEeCCCCCCEEEE---EeCCCEEEEcCCCEEEEEECCCChHHC
Confidence 45689999999998765 456898873 1221 1468999988775 99999998874
No 64
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.87 E-value=0.00027 Score=43.88 Aligned_cols=54 Identities=11% Similarity=0.137 Sum_probs=40.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+. . -.....|.+++..|.+ +++|.+.+.| .|.|++++.+|.
T Consensus 24 ~~~~G~~v~L~C~~~-~---p~~~v~W~k~g~~~~~----~~~~~~~~~~~~~~L~I~~v~~~D~ 80 (113)
T 2cpc_A 24 AAVRLERVVLTCELC-R---PWAEVRWTKDGEEVVE----SPALLLQKEDTVRRLVLPAVQLEDS 80 (113)
T ss_dssp EEETTCCEEEEEEES-C---TTCCCEEEETTEECCC----BTTBEEEECSSEEEEEESSCCTTTC
T ss_pred EEEcCCeEEEEEEec-C---CCCeEEEEECCEECcc----CCCEEEEECCCEEEEEECCCCcccC
Confidence 456899999999974 2 1234579999877644 4678887765 799999988774
No 65
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.87 E-value=0.0012 Score=39.83 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc--cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG--DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG--eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ....|.+++..|.+. ...++....+| .|.|++++..|. ..-.|.+
T Consensus 16 ~~~~G~~~~l~C~~~g~p~---p~v~W~~~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 81 (100)
T 2kdg_A 16 SIDEGRFCRMDFKVSGLPA---PDVSWYLNGRTVQSD--DLHKMIVSEKGLHSLIFEVVRASDA--GAYACVA 81 (100)
T ss_dssp EEETTCCEEEEEECEEESC---CEEEEEETTEEECCC--SSSCEEEETTTEEEEEESSCCGGGC--EEEEEEE
T ss_pred EecCCCEEEEEEEEEeeCC---CEEEEEECCEECcCC--CcEEEEEcCCCeEEEEECCCCcccC--EEEEEEE
Confidence 5678999999999753322 257899999776542 23355555666 899999888764 2444443
No 66
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=96.86 E-value=0.00057 Score=43.97 Aligned_cols=47 Identities=17% Similarity=0.182 Sum_probs=34.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeE-eeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIR-LSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v-~~~~~ 79 (98)
.+++|.+++|.|.+...- . .+|.+|+..|.+ + .+|.|.|.+| +.+|.
T Consensus 10 v~~~G~~v~L~C~~~g~P-~----i~W~kdg~~l~~-----~-----~~~~L~I~~v~~~~Ds 57 (82)
T 3r08_E 10 VSISGTSVELTCPLDSDE-N----LKWEKNGQELPQ-----K-----HDKHLVLQDFSEVEDS 57 (82)
T ss_dssp EEEETTEEEEECSSCCCS-S----CEEEETTEECTT-----C-----CSSCCBCCSCCTTTTC
T ss_pred EEEcCCeEEEEEECCCCC-c----EEEEECCEECcC-----C-----CCCEEEECccCccCcC
Confidence 568999999999986554 2 799999877632 1 5678888885 54553
No 67
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.82 E-value=0.0012 Score=40.67 Aligned_cols=53 Identities=19% Similarity=0.334 Sum_probs=40.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...- ....|++++..|.+ ++++.+. .+.|.|++++.+|.
T Consensus 14 ~v~~G~~v~L~C~~~g~p----p~i~W~k~g~~~~~----~~~~~~~-~~~L~i~~v~~~D~ 66 (99)
T 2cr3_A 14 LVHPGDLLQLRCRLRDDV----QSINWLRDGVQLAE----SNRTRIT-GEEVEVQDSVPADS 66 (99)
T ss_dssp CBCTTSCEEEECCCCSSC----CEEEEEESSSBCCC----CSSEEEC-SSEEEETTCCTTTC
T ss_pred EEeCCCcEEEEEEecCCC----CeEEEEECCEECCC----CCcEEEE-CCEEEEccCCHHHC
Confidence 567899999999986542 26789999966543 4577775 78999999887764
No 68
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=96.80 E-value=0.0015 Score=39.89 Aligned_cols=62 Identities=10% Similarity=0.188 Sum_probs=40.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEE-ccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV-LSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~v-lpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ...|.+++..+.+ +.++.+ ..++.|.|.+++.+|. ..-.|..
T Consensus 21 ~v~~G~~v~l~C~~~g~p~p---~i~W~~~~~~~~~----~~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 83 (108)
T 3kvq_A 21 TTSIGESIEVSCTASGNPPP---QIMWFKDNETLVE----DSGIVLKDGNRNLTIRRVRKEDE--GLYTCQA 83 (108)
T ss_dssp EEETTCCEEEECBCC----C---CEEEEESSSBCCC----BTTEEEETTTTEEEECSCCGGGC--EEEEEEE
T ss_pred EEeCCCeEEEEEECcCcCCC---eEEEEECCeEccc----CCCeEEeCCCcEEEEeecCcccC--EEEEEEE
Confidence 56789999999997543322 3679999866543 233443 4578899999887773 3334443
No 69
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=96.76 E-value=0.00094 Score=43.19 Aligned_cols=62 Identities=19% Similarity=0.290 Sum_probs=39.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe--e--eecC---------cCCCceEEEccC------ccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV--N--IYLN---------TDTGGKYVVLSS------GDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~--~--I~p~---------~~~dgKY~vlps------GeL~Ir~v~~~~ 78 (98)
.+..|.+|+|.|.+.+....-.....|.+++. . +|.. ....||+.+.++ +.|.|++++.+|
T Consensus 17 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 96 (139)
T 1pko_A 17 RALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSD 96 (139)
T ss_dssp EEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGG
T ss_pred EEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHH
Confidence 56789999999997533221123578988762 2 2221 123588888753 579999999887
Q ss_pred C
Q psy5692 79 G 79 (98)
Q Consensus 79 ~ 79 (98)
.
T Consensus 97 ~ 97 (139)
T 1pko_A 97 E 97 (139)
T ss_dssp C
T ss_pred C
Confidence 4
No 70
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=96.75 E-value=0.00086 Score=43.76 Aligned_cols=63 Identities=24% Similarity=0.324 Sum_probs=47.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+..+-.. ..+|.+++..+.+ ++++.+..+|.|.|.+++.+|. ..-.|.+.
T Consensus 111 ~~~~g~~~~l~C~~~g~p~~---~v~W~~~~~~~~~----~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a~ 173 (192)
T 2iep_A 111 KIIEGLKAVLPCTTMGNPKP---SVSWIKGDSALRE----NSRIAVLESGSLRIHNVQKEDA--GQYRCVAK 173 (192)
T ss_dssp EEETTSCEEECCEEEEESCC---EEEEEETTEECCC----CSSEEECTTSCEEESSCCGGGC--EEEEEEEE
T ss_pred EEeCCCcEEEEEEEeccCCc---eEEEEeCCEEccC----CCcEEEecCCcEEEecCChhhC--EEEEEEEE
Confidence 57789999999997443222 4789999976644 5789999999999999988763 34555543
No 71
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=96.74 E-value=0.0015 Score=42.45 Aligned_cols=62 Identities=24% Similarity=0.268 Sum_probs=45.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...- .....|.+++..+.+ +++|.+.++| .|.|++++.+|.- .-.|.+
T Consensus 18 ~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 82 (197)
T 3lcy_A 18 TTKLGEAAQLSCQIVGRP---LPDIKWYRFGKELIQ----SRKYKMSSDGRTHTLTVMTEEQEDEG--VYTCIA 82 (197)
T ss_dssp EEETTSEEEEEEEEEEES---CCEEEEEETTEEECC----CSSEEEEESSSEEEEEEECCSGGGCE--EEEEEE
T ss_pred EEeCCCcEEEEEEEecCC---CCEEEEEECCEECCC----CccEEEEeCCCEEEEEEecCCccCCE--EEEEEE
Confidence 577999999999974322 225789999977644 5788888887 7999998877642 445544
No 72
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=96.73 E-value=0.0012 Score=43.23 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=42.6
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCC--e--eeecC---------cCCCceEEEccC------ccEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V--NIYLN---------TDTGGKYVVLSS------GDLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~--~I~p~---------~~~dgKY~vlps------GeL~Ir~v~~~~~ 79 (98)
+..|.+|+|.|.+++-...-.....|.+++ . .+|.. ....+|..++.+ ..|.|+||+.+|.
T Consensus 17 g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~ 96 (125)
T 4gos_A 17 GNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDA 96 (125)
T ss_dssp EETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGC
T ss_pred EeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHC
Confidence 447999999999853322222346798875 1 22211 123567777643 3699999999885
Q ss_pred Ccceeeeeeh
Q psy5692 80 NLSVKKMKVE 89 (98)
Q Consensus 80 n~~~~~~~~~ 89 (98)
..=.|.+.
T Consensus 97 --G~Y~C~v~ 104 (125)
T 4gos_A 97 --GTYKCYII 104 (125)
T ss_dssp --EEEEEEEE
T ss_pred --EEEEEEEE
Confidence 34555554
No 73
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=96.73 E-value=0.00084 Score=43.99 Aligned_cols=62 Identities=13% Similarity=0.209 Sum_probs=44.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC-CeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD-DVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D-d~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+...-. -..|.++ ...+.+ ++++.+.++| .|.|++++.+|.- .-.|.+.
T Consensus 13 ~v~~G~~v~L~C~~~~~p~----~v~W~~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~~ 78 (189)
T 2v44_A 13 ELSVGESKFFTCTAIGEPE----SIDWYNPQGEKIIS----TQRVVVQKEGVRSRLTIYNANIEDAG--IYRCQAT 78 (189)
T ss_dssp EEETTCCEEEEEEEEECCS----EEEEECTTSCBCCC----CSSEEEEEETTEEEEEECSCCGGGCE--EEEEEEE
T ss_pred EEecCCcEEEEEEeecCCe----eEEEEeCCCCccCC----CceEEEECCCCeEEEEEccCCcccCe--EEEEEEE
Confidence 5678999999999864422 5799994 455433 6789888877 8999998887742 3445443
No 74
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=96.73 E-value=0.0037 Score=38.78 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=43.9
Q ss_pred ceeecCeEEEEccCCCC---ccceeEEeEEccCC-eee--e-cC--------cCCCceEEEc-cCccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSY---MSEYIIVTSWIQDD-VNI--Y-LN--------TDTGGKYVVL-SSGDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~---V~d~V~V~SW~~Dd-~~I--~-p~--------~~~dgKY~vl-psGeL~Ir~v~~~~~n~ 81 (98)
.+..|.+|+|.|.+... -.+. ....|.+++ ..+ + .+ ....||..+. .++.|.|++++.+|.
T Consensus 5 ~~~~G~~v~L~C~~~~~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~-- 81 (110)
T 1ncn_A 5 QAYFNETADLPCQFANSQNQSLSE-LVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDK-- 81 (110)
T ss_dssp EEETTSCEEEECCCCCTTCCCGGG-EEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGC--
T ss_pred EEEeCCCEEEEeEeCCCCcCCCcc-EEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHC--
Confidence 35689999999998422 1222 257898876 212 2 11 1234677665 478999999999885
Q ss_pred ceeeeeeh
Q psy5692 82 SVKKMKVE 89 (98)
Q Consensus 82 ~~~~~~~~ 89 (98)
..=.|.+.
T Consensus 82 G~Y~C~v~ 89 (110)
T 1ncn_A 82 GLYQCIIH 89 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 44455543
No 75
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=96.71 E-value=0.0015 Score=44.19 Aligned_cols=70 Identities=11% Similarity=0.142 Sum_probs=45.2
Q ss_pred ceeecCeEEEEccCCCCccc-e-eEEeEEccCCe--ee--ecCc-----CCCceEEEcc--------CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-Y-IIVTSWIQDDV--NI--YLNT-----DTGGKYVVLS--------SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~-V~V~SW~~Dd~--~I--~p~~-----~~dgKY~vlp--------sGeL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+.+.-.+ . .....|.+++. .+ |... ...||+.+++ ++.|.|++++.+|
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 89 (221)
T 3eow_R 10 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVED 89 (221)
T ss_dssp CCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCC
T ss_pred EEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHH
Confidence 56789999999998332112 2 45678999862 11 2110 1167887775 7789999999887
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ..-.|.+.
T Consensus 90 ~--G~Y~C~~~ 98 (221)
T 3eow_R 90 E--GSYTCLFV 98 (221)
T ss_dssp C--SCBEEEEE
T ss_pred C--eEEEEEEE
Confidence 5 34455543
No 76
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=96.67 E-value=0.001 Score=44.28 Aligned_cols=59 Identities=12% Similarity=0.044 Sum_probs=39.9
Q ss_pred ceeecCeEEEEccCCCCcc--ceeEEeEEccCCeeeecCcCCCceEEEccC------ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS--EYIIVTSWIQDDVNIYLNTDTGGKYVVLSS------GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~--d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps------GeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...-. .--....|.+++..+. ...+|+.++++ +.|.|++++.+|.
T Consensus 13 ~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~---~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 79 (202)
T 3bp6_B 13 TVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTS---LQSERATLLEEQLPLGKALFHIPSVQVRDS 79 (202)
T ss_dssp EEETTSCEEEEEEECTTC---CTTEEEEEEECC--CC---CBCSSCEECGGGGGGTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCccc---ccCCceEEeeccccCCeeEEEECCCCHHHC
Confidence 4678999999999865421 1114578999542221 13578888765 7899999988775
No 77
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=96.65 E-value=0.0044 Score=40.39 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=47.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--eeeecCc------------CCCceEEEcc-CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--VNIYLNT------------DTGGKYVVLS-SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~~I~p~~------------~~dgKY~vlp-sGeL~Ir~v~~~~~n~~ 82 (98)
.++.|.+++|.|.++.. .-+....|.+.. ..+++.. ...+|..+.. +|.|.|+|++.+|.-
T Consensus 10 ~~~~G~sVtL~c~~~~~--~~~~~i~W~~~~~ia~~~~~~~~~~~~~~~~~~~f~~Rl~l~~~~~SL~I~nl~~~DsG-- 85 (111)
T 2pkd_A 10 NGILGESVTFPVNIQEP--RQVKIIAWTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAG-- 85 (111)
T ss_dssp EEETTSCEEECCCCCTT--CCEEEEEEESSSEEEEEECCCSSSCCEEEECSGGGTTCEEECTTTCCEEECSCCGGGCE--
T ss_pred EEEeCCCEEEeCccCCC--CeeeEEEEecCCEEEEEECCCCCCcceeEEeCCCcCCcEEEeCCCEEEEECCCCHHHCE--
Confidence 45689999999998742 345578888765 3333422 2347788874 899999999999864
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
.=+|.|.
T Consensus 86 ~Y~c~i~ 92 (111)
T 2pkd_A 86 DYKADIN 92 (111)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3455543
No 78
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=96.65 E-value=0.0035 Score=43.97 Aligned_cols=70 Identities=10% Similarity=0.004 Sum_probs=41.1
Q ss_pred EeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEE---eEeeecCCcceeeeee
Q psy5692 13 VNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQ---IRLSITGNLSVKKMKV 88 (98)
Q Consensus 13 V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir---~v~~~~~n~~~~~~~~ 88 (98)
-.+. .+..|.++.|.|.+..+-.- ..+|.+++..+......++|+.+.++|.|.|. +++.+| +..-.|..
T Consensus 113 ~~~~-~v~~g~~~~l~C~~~G~P~P---~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D--~G~YtC~A 185 (203)
T 4fa8_A 113 SERS-QFPDFSVLTVTCTVNAFPHP---HVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPW--HLPVTCVG 185 (203)
T ss_dssp EEEC-CSSCSCCEEEEEEEEEESCC---EEEECCC------------CCEECTTSCEEEEEEEEECSSC--CCCEEEEE
T ss_pred ceeE-EEcCCCEEEEEEEcCCCCCC---EEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHH--CEEEEEEE
Confidence 3444 67889999999997543332 35799887433222345789999999999886 555554 23455544
No 79
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=96.64 E-value=0.0013 Score=42.15 Aligned_cols=69 Identities=19% Similarity=0.307 Sum_probs=45.5
Q ss_pred ceeecCeEEEEccCCCCc-cceeEEeEEccCC----eeeec-CcCCCceEEEccCc--------cEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPSYM-SEYIIVTSWIQDD----VNIYL-NTDTGGKYVVLSSG--------DLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd----~~I~p-~~~~dgKY~vlpsG--------eL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|.|.|.+.+.- .+-.....|.+.. ..++. .....||+.+.++. .|.|++++.+|. +.
T Consensus 18 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~Ds--G~ 95 (120)
T 3noi_A 18 RTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDA--SI 95 (120)
T ss_dssp EEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGC--EE
T ss_pred EEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhC--EE
Confidence 456899999999986543 2223457899874 33321 22356899886433 799999998884 44
Q ss_pred eeeee
Q psy5692 84 KKMKV 88 (98)
Q Consensus 84 ~~~~~ 88 (98)
=-|.+
T Consensus 96 Y~C~v 100 (120)
T 3noi_A 96 YVCRV 100 (120)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44544
No 80
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=96.60 E-value=0.002 Score=44.67 Aligned_cols=64 Identities=13% Similarity=0.260 Sum_probs=44.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ...|.+++..+.+ ..+++|.+.++|.|.|.+++..|.- .-.|.+
T Consensus 109 ~v~~G~~v~l~C~~~~~p~~---~v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G--~Y~C~~ 172 (291)
T 2wim_A 109 EFKQGEDAEVVCRVSSSPAP---AVSWLYHNEEVTT--ISDNRFAMLANNNLQILNINKSDEG--IYRCEG 172 (291)
T ss_dssp EEETTSCEEECCCCBCSSCC---EEEEECC----CB--CCCSSEEECTTSCEEETTCCGGGCE--EEEEEE
T ss_pred hhcCCCCEEEEEEEccCCCC---EEEEEECCccccc--cCCceEEEccCCCEEEEecchhhCE--EEEEEE
Confidence 46789999999998654322 3789999865533 2478999999999999999887753 344443
No 81
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=96.56 E-value=0.0026 Score=39.50 Aligned_cols=68 Identities=18% Similarity=0.346 Sum_probs=43.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--------eeeecC-----cCCCceEEEcc-----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--------VNIYLN-----TDTGGKYVVLS-----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--------~~I~p~-----~~~dgKY~vlp-----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+.+.-. .. ...|.+.. ..++.. ....+||.+.. ++.|.|++++.+|.
T Consensus 8 ~~~~G~~v~L~C~~~~~~~-~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 85 (116)
T 2or8_A 8 KGVVGHPVTLPCTYSTYRG-IT-TTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDS 85 (116)
T ss_dssp EEETTSCEEECCBCCCTTC-CC-CEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGC
T ss_pred EEEeCCcEEEEEEeeCCCC-Cc-EEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccC
Confidence 4668999999999854211 22 36898875 223321 12368888742 46799999998774
Q ss_pred Ccceeeeeeh
Q psy5692 80 NLSVKKMKVE 89 (98)
Q Consensus 80 n~~~~~~~~~ 89 (98)
..=.|.+.
T Consensus 86 --G~Y~C~v~ 93 (116)
T 2or8_A 86 --GLYCCRVE 93 (116)
T ss_dssp --EEEEEEEC
T ss_pred --EEEEEEEE
Confidence 34445543
No 82
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=96.55 E-value=0.0021 Score=42.79 Aligned_cols=66 Identities=17% Similarity=0.163 Sum_probs=45.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-. ....|.+++..+.+............++.|.|++++..|.- .-.|.+
T Consensus 30 ~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 95 (231)
T 3ojm_B 30 AVPAANTVKFRCPAGGNPM---PTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKG--NYTCVV 95 (231)
T ss_dssp EEETTSCEEEECCEEEESC---CEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCE--EEEEEE
T ss_pred EEccCCCEEEEEecccCCC---CeEEEEECCccccccccccceeeecCcceEEEecCCcccCE--EEEEEE
Confidence 5779999999999754322 24789999977765443444455556778999988877643 444544
No 83
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=96.54 E-value=0.0016 Score=47.21 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=52.4
Q ss_pred EEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeee---cCCcceeee
Q psy5692 10 EINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSI---TGNLSVKKM 86 (98)
Q Consensus 10 ev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~---~~n~~~~~~ 86 (98)
..+-.+. .|+.|.+++|.|.+...- -.....|.+|+..+.+ ..++++.+.++|.|+|.++... ...+..-.|
T Consensus 25 ~~~P~~~-~v~~G~~v~L~C~~~~~~--p~~~v~W~k~g~~~~~--~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C 99 (403)
T 3laf_A 25 VSEPSDA-VTMRGGNVLLNCSAESDR--GVPVIKWKKDGLILAL--GMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQC 99 (403)
T ss_dssp EECCCCE-EECTTCCEEECCEEECTT--CCCEEEEEETTEECCT--TSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEE
T ss_pred EeCCCce-EEecCCcEEEEEEcCCCC--CCceEEEEECCEECcc--CCcccEEEecCCcEEEeeeeccCCCCCcceEEEE
Confidence 3344455 788999999999986431 1235789999977743 2468999999999999998432 223456667
Q ss_pred eeh
Q psy5692 87 KVE 89 (98)
Q Consensus 87 ~~~ 89 (98)
.+.
T Consensus 100 ~~~ 102 (403)
T 3laf_A 100 EAS 102 (403)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 84
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.52 E-value=0.0011 Score=50.78 Aligned_cols=58 Identities=24% Similarity=0.273 Sum_probs=43.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+. .-. ...+|.+++..+......++|+.+.++|.|.|++++.+|.
T Consensus 352 ~v~~G~~v~L~C~~~-~p~---p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 409 (440)
T 3zyj_A 352 NVTEGMAAELKCRAS-TSL---TSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDT 409 (440)
T ss_dssp EECTTSCCEECCEES-STT---SEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTC
T ss_pred eeccCceEEEEeecC-CCC---CceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhC
Confidence 566899999999973 222 2457998773333434456899999999999999998874
No 85
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=96.49 E-value=0.0015 Score=40.80 Aligned_cols=67 Identities=10% Similarity=0.100 Sum_probs=41.0
Q ss_pred ceeecCeEEEEccCCCCcc-ceeEEeEEccCCeeeecCcCCCceEEEc---------cCccEEEEeEeeecCCcceeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMS-EYIIVTSWIQDDVNIYLNTDTGGKYVVL---------SSGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~-d~V~V~SW~~Dd~~I~p~~~~dgKY~vl---------psGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
.|..|.+|+|.|.+...-. +. -...|++++..... ...+++|.+. .++.|.|++++..|. ..-.|.
T Consensus 15 ~v~~G~~v~L~C~~~g~p~~~~-p~v~W~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y~C~ 90 (108)
T 3cx2_A 15 EVTVGGSITFSARVAGASLLKP-PVVKWFKGKWVDLS-SKVGQHLQLHDSYDRASKVYLFELHITDAQPAFT--GSYRCE 90 (108)
T ss_dssp EEETTCCEEEEEEEECC-CCSC-CEEEEEETTTEEGG-GGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGC--EEEEEE
T ss_pred EEeCCCCEEEEEEECCCccCCC-cEEEEccCCccccc-ccCCceEEEeeEEecccccceEEEEEecCCCccC--EEEEEE
Confidence 4678999999999843221 11 24689998732211 1124466543 257899999998874 344454
Q ss_pred e
Q psy5692 88 V 88 (98)
Q Consensus 88 ~ 88 (98)
+
T Consensus 91 a 91 (108)
T 3cx2_A 91 V 91 (108)
T ss_dssp E
T ss_pred E
Confidence 4
No 86
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=96.49 E-value=0.0025 Score=42.58 Aligned_cols=68 Identities=16% Similarity=0.305 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCC---CCccceeEEeEEccCCeee--ecC---------cCCCceEEEccC------ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIP---SYMSEYIIVTSWIQDDVNI--YLN---------TDTGGKYVVLSS------GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IP---s~V~d~V~V~SW~~Dd~~I--~p~---------~~~dgKY~vlps------GeL~Ir~v~~~ 77 (98)
.|..|.+++|.|.++ ..-.+. ....|.+++..+ |.. ....+|+.++++ +.|.|++++.+
T Consensus 12 ~~~~G~~v~L~C~~~~~p~~~~~~-~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 90 (222)
T 3sbw_C 12 VVEYGSNMTIECKFPVEKQLDLAA-LIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ 90 (222)
T ss_dssp EEETTSCEEEEEECCCCSSCCTTT-CEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG
T ss_pred EEEcCCcEEEEeEecCCCCCCCcc-EEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc
Confidence 456899999999973 222222 246899987333 221 112478888765 48999999888
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|.- .-.|.+
T Consensus 91 D~G--~Y~C~~ 99 (222)
T 3sbw_C 91 DAG--VYRCMI 99 (222)
T ss_dssp GCE--EEEEEE
T ss_pred cCe--EEEEEE
Confidence 753 344443
No 87
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=96.48 E-value=0.00091 Score=44.87 Aligned_cols=55 Identities=9% Similarity=-0.113 Sum_probs=34.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+... .....|.+++..+.|. +.++.+.+ .+.|.|++++.+|.
T Consensus 111 ~v~~G~~v~L~C~~~~~----~~~v~W~k~g~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~D~ 169 (198)
T 1ugn_A 111 VVNSGGNVTLQCDSQVA----FDGFILCKEGEDEHPQ---CLNSQPHARGSSRAIFSVGPVSPSRR 169 (198)
T ss_dssp EEETTCCEEEEEECSSC----CSEEEEEEC------C---EEEC------CCEEEEEECCCCTTSC
T ss_pred ccCCCCcEEEEEecCCC----CcEEEEEECCCccCCc---cccccccCCCcceeEEEecccCcccC
Confidence 67899999999998765 2367899998666541 23444444 37899999887764
No 88
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=96.47 E-value=0.00037 Score=41.86 Aligned_cols=68 Identities=10% Similarity=0.085 Sum_probs=40.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcC-CCceEEE------ccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTD-TGGKYVV------LSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~-~dgKY~v------lpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...-... ....|.+++..+..... ...+|.. ..++.|.|++++.+|. ..-.|.+
T Consensus 21 ~v~~G~~v~L~C~~~~~~~~~-~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y~C~a 95 (112)
T 3so5_A 21 SAIXGSDVSFTCSAASSSDSP-MTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE--GXYQCVI 95 (112)
T ss_dssp EECTTCCEEEEEEEEESCCCC-CEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC--EEEEEEE
T ss_pred EEECCCCEEEEEEEecCCCCC-EEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccC--CeEEEEE
Confidence 677899999999975332212 23589999976643110 0012211 1247899999988774 3334443
No 89
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=96.46 E-value=0.0026 Score=46.07 Aligned_cols=56 Identities=20% Similarity=0.294 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.++..-.. ....|.+++..+.+ .+.++.+.++|.|+|.+++..|
T Consensus 127 ~v~~G~~v~l~C~~~~~~p~--~~v~W~~~~~~~~~---~~~~~~~~~~~~l~i~~v~~~d 182 (404)
T 3p3y_A 127 VVQEGAPLTLQCNPPPGLPS--PVIFWMSSSMEPIT---QDKRVSQGHNGDLYFSNVMLQD 182 (404)
T ss_dssp EEETTSCEEECCCCCCCSSC--CEEEEECTTSCBCC---CCSSEEECTTSCEEESSCCSGG
T ss_pred EEccCCcEEEEeCCCCCCCC--CeEEEeCCCccccC---CCCcEEEcCCCcEEEEeeeecc
Confidence 56789999999998433222 36789999844333 4679999999999999999888
No 90
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=96.46 E-value=0.004 Score=42.07 Aligned_cols=66 Identities=17% Similarity=0.177 Sum_probs=46.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-. ....|.+++..+.+.....+......++.|.|++++..|.- .-.|.+
T Consensus 26 ~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G--~Y~C~~ 91 (241)
T 3grw_A 26 AVPAANTVRFRCPAAGNPT---PSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRG--NYTCVV 91 (241)
T ss_dssp EEETTSEEEEECCEECSSC---CEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCE--EEEEEE
T ss_pred EEcCCCeEEEEEEecCCCC---ceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCE--EEEEEE
Confidence 4568999999999864422 26789999977766544455566667888999988877643 444443
No 91
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=96.45 E-value=0.0018 Score=42.26 Aligned_cols=67 Identities=16% Similarity=0.309 Sum_probs=44.8
Q ss_pred ceeecCeEEEEcc-CCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQ-IPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~-IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|..|.++.|.|. ....-. .....|.+++..+... ..+.++....+|.|.|++++.+|. ..-.|.+.
T Consensus 19 ~v~~G~~v~L~C~~~~~~p~--~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~--G~Y~C~~~ 86 (201)
T 3s97_C 19 RVKEGKGMVLLCDPPYHFPD--DLSYRWLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDK--GNYSCFVS 86 (201)
T ss_dssp EEETTCCEEECCCCCSEESS--CCEEEEEESSTTCBCC-CSSSEEECTTTCCEEESSCCGGGC--EEEEEEEE
T ss_pred EEECCCCEEEeccccccCCC--ceEEEEEECCceeeee-eCCCeEEEcCCCeEEECcCCcccC--eEEEEEEE
Confidence 5678999999999 332211 1356899998555321 124455666899999999988775 34556554
No 92
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=96.45 E-value=0.0022 Score=46.40 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=49.8
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecC---cCCCceEEEccCccEEEEeEeeecCC-cceeeeeeh
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN---TDTGGKYVVLSSGDLYVQIRLSITGN-LSVKKMKVE 89 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~---~~~dgKY~vlpsGeL~Ir~v~~~~~n-~~~~~~~~~ 89 (98)
.+. .+..|.++.|.|.++..-.. ...+|.+++....|. ...++++.+.++|.|.|.+++.+|.- ...-.|.+.
T Consensus 108 ~~~-~~~~G~~v~l~C~~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~ 184 (395)
T 1bih_A 108 HEK-TPIEGRPFQLDCVLPNAYPK--PLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAK 184 (395)
T ss_dssp EEE-CCBTTEEEEECCCCCEEESC--CEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEE
T ss_pred cce-eeeeCCcEEEEecCCCCCCC--CeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEE
Confidence 344 77899999999998422212 467899985211222 22378999999999999999988764 225556553
No 93
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=96.44 E-value=0.003 Score=41.46 Aligned_cols=63 Identities=21% Similarity=0.353 Sum_probs=44.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc--Cc--cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS--SG--DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp--sG--eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+.+.-. ...+|.+++..|.+ .+.+|.+.. +| .|.|++++.+|.- .-.|.+
T Consensus 15 ~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 81 (197)
T 2j8h_A 15 NVRYQSNATLVCKVTGHPK---PIVKWYRQGKEIIA---DGLKYRIQEFKGGYHQLIIASVTDDDAT--VYQVRA 81 (197)
T ss_dssp EEETTSCEEEEEEEECSSC---CEEEEEETTEECCC---CSSSEEEEEETTTEEEEEECSCCGGGCS--EEEEEE
T ss_pred EEcCCCEEEEEEEEeecCC---CEEEEEECCEECcc---CCCcEEEEEcCCCEEEEEECcCCHHhCE--EEEEEE
Confidence 5778999999999854322 34789999977654 356777753 44 8999999887753 444544
No 94
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=96.44 E-value=0.003 Score=42.31 Aligned_cols=70 Identities=14% Similarity=0.135 Sum_probs=47.2
Q ss_pred ceeecCeEEEEccCCCCc--cceeEEeEEccCC--eeee--c-----CcCCCceEEEcc------CccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYM--SEYIIVTSWIQDD--VNIY--L-----NTDTGGKYVVLS------SGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V--~d~V~V~SW~~Dd--~~I~--p-----~~~~dgKY~vlp------sGeL~Ir~v~~~~~n 80 (98)
.|..|.+++|.|.+...- ..-.....|.+++ ..++ . .....+|+.+++ ++.|.|++++..|.-
T Consensus 6 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G 85 (222)
T 4i0k_A 6 VALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEG 85 (222)
T ss_dssp CCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCS
T ss_pred EEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCE
Confidence 567999999999986431 2233577899876 2221 1 112468888887 788999999988753
Q ss_pred cceeeeeeh
Q psy5692 81 LSVKKMKVE 89 (98)
Q Consensus 81 ~~~~~~~~~ 89 (98)
.-.|.+.
T Consensus 86 --~Y~C~~~ 92 (222)
T 4i0k_A 86 --SYTCFVS 92 (222)
T ss_dssp --CEEEEEE
T ss_pred --EEEEEEE
Confidence 4455543
No 95
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=96.43 E-value=0.0038 Score=41.66 Aligned_cols=67 Identities=24% Similarity=0.336 Sum_probs=46.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCc----CCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNT----DTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~----~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.++..... ...+|.+++..|.... ..++++.+..+|.|.|.+++.+|.- .-.|.+
T Consensus 119 ~~~~g~~v~l~C~~~~g~p~--~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~a 189 (217)
T 2vr9_A 119 RVAKGETALLECGPPKGIPE--PTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEG--NYKCIA 189 (217)
T ss_dssp EECTTSCEEECCBCCCEESC--CEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCE--EEEEEE
T ss_pred EEcCCCeEEEEEECCCCCCC--CeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCe--EEEEEE
Confidence 57789999999997322111 2378999997664221 2467888889999999998877653 345554
No 96
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=96.42 E-value=0.0013 Score=44.79 Aligned_cols=62 Identities=10% Similarity=0.041 Sum_probs=42.1
Q ss_pred ceeec--CeEEEEccCCCCccceeEEeEEccC--CeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILG--NTAVLRCQIPSYMSEYIIVTSWIQD--DVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirG--NtAVLkC~IPs~V~d~V~V~SW~~D--d~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..| .+++|.|.+..- . .-.+|.++ +..+.+ .+.++...+.+.|.|++++.+|.- .-.|..
T Consensus 18 ~v~eG~~~~v~L~C~~~~p--~--~~v~w~~~~~~g~~~~---~~~~~~~~~~~~l~I~~v~~~D~G--~Y~C~a 83 (213)
T 2x1w_L 18 YITENKNKTVVIPCLGSIS--N--LNVSLCARYPEKRFVP---DGNRISWDSKKGFTIPSYMISYAG--MVFCEA 83 (213)
T ss_dssp EECCSTTCEEEECCCBSST--T--CCEEEEEETTTEEECC---CSSSCEEETTTEEEEEGGGTTTCS--EEEEEE
T ss_pred EEecCCCccEEEeeccCCC--C--cEEEEEhhcCCCcccc---CCCcccccCCccEEEccCChhcCc--eEEEEE
Confidence 56789 999999998531 2 34567664 444444 245677778889999999888753 455554
No 97
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=96.42 E-value=0.001 Score=47.68 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=48.7
Q ss_pred eEEEEeeeeceeecCeEEEEccCCCCc----cceeEEeEEccCCeee-ecCcCCCceEEEccCccEEEEeEeeecCCcce
Q psy5692 9 YEINVNYEHNVILGNTAVLRCQIPSYM----SEYIIVTSWIQDDVNI-YLNTDTGGKYVVLSSGDLYVQIRLSITGNLSV 83 (98)
Q Consensus 9 Yev~V~d~~~VirGNtAVLkC~IPs~V----~d~V~V~SW~~Dd~~I-~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~ 83 (98)
+...-.+. .|..|.++.|.|.+..+- ..-.....|.+++..+ .+ ...+.++. ..+|.|.|.+++.+|. ..
T Consensus 21 ~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~-~~~~~L~i~~v~~~D~--G~ 95 (339)
T 3o4o_C 21 RGRHYKRE-FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVP-GEEETRMW-AQDGALWLLPALQEDS--GT 95 (339)
T ss_dssp EEECSCCE-EEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCS-CCSSSCEE-EETTEEEESSBCTTCC--EE
T ss_pred hCcCceEE-EEECCccEEEEeccccccccccCCCCceEEEEECCCCcccC-ccccccEE-eeCCeEEECCCCcccC--EE
Confidence 33444555 889999999999986221 1223356899998553 33 22245665 5789999999988764 34
Q ss_pred eeeee
Q psy5692 84 KKMKV 88 (98)
Q Consensus 84 ~~~~~ 88 (98)
-.|.+
T Consensus 96 Y~C~~ 100 (339)
T 3o4o_C 96 YVCTT 100 (339)
T ss_dssp EECCE
T ss_pred EEEEE
Confidence 44544
No 98
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=96.42 E-value=0.00048 Score=43.29 Aligned_cols=62 Identities=11% Similarity=0.164 Sum_probs=44.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc---CccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS---SGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-. ....|.+++..|.+ +++|.+.. ++.|.|++++..|.- .-.|.+
T Consensus 25 ~v~~G~~v~L~C~~~g~p~---p~v~W~k~g~~l~~----~~~~~~~~~~~~~~L~I~~v~~~D~G--~Y~C~a 89 (106)
T 1nct_A 25 TVYEGESARFSCDTDGEPV---PTVTWLRKGQVLST----SARHQVTTTKYKSTFEISSVQASDEG--NYSVVV 89 (106)
T ss_dssp EESSSSCEECCEEEECSSC---CBCCBCSSSSCCTT----CSSEEEEECSSEEEEEECCCCSSCCS--EEEECC
T ss_pred EEeCCCcEEEEEEEEEcCC---CEEEEEECCEECCC----CCCEEEEECCCEEEEEECcCCchhCE--EEEEEE
Confidence 5678999999999743332 24689999866543 57888775 578999999887753 445544
No 99
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=96.41 E-value=0.0018 Score=44.92 Aligned_cols=64 Identities=17% Similarity=0.293 Sum_probs=47.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ...|.+++..+.+ ..+.+|.+.++|.|.|.+++.+|.- .-.|.+
T Consensus 111 ~~~~g~~v~l~C~~~~~p~~---~v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~a 174 (291)
T 1qz1_A 111 EFKEGEDAVIVCDVVSSLPP---TIIWKHKGRDVIL--KKDVRFIVLSNNYLQIRGIKKTDEG--TYRCEG 174 (291)
T ss_dssp EEETTSCEEECCEEECSSCC---EEEEEETTSCSST--TCCTTEEECTTSCEEETTCCGGGCE--EEEEEE
T ss_pred cccCCCeEEEEEEeccCCCC---EEEEEECCEEccc--CCCceEEEccCCcEEEccCccccCe--EEEEEE
Confidence 57789999999998654332 4789999866533 2467999999999999999887752 444543
No 100
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=96.40 E-value=0.0038 Score=48.99 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCee-----e--ec--------CcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVN-----I--YL--------NTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~-----I--~p--------~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|...+. -.....|.+++.. | |. .....||+.+.++|.|.|++++.+|.
T Consensus 10 ~v~~G~~v~L~C~~~~~---~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~~v~~~D~ 83 (642)
T 1e07_A 10 NVAEGKEVLLLVHNLPQ---HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDT 83 (642)
T ss_pred cccccccEEEEEccCCC---CceEEEEECCcccCCcceEEEEEccccccccCccccCceeeccCCcEEECCCCcccC
Confidence 67899999999996443 2346889986521 2 11 11236799999999999999998875
No 101
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=96.40 E-value=0.0019 Score=40.68 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=42.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC--cCCCceEEEccCc------cEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN--TDTGGKYVVLSSG------DLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~--~~~dgKY~vlpsG------eL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|+|.|.+.... ....|.+.+ . .++-. ....|||.+..++ .|.|++++.+|. ..
T Consensus 12 ~v~~G~~v~L~C~~~~~~----~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~Ds--G~ 85 (113)
T 1h5b_A 12 SLHEGTDSALRCNFTTTM----RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDS--GT 85 (113)
T ss_dssp EEETTCCEEEEEEESSCC----SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGC--EE
T ss_pred EEecCCcEEEEEEECCCC----ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhC--EE
Confidence 456899999999986532 247898753 1 22211 1236899987655 899999998764 34
Q ss_pred eeeee
Q psy5692 84 KKMKV 88 (98)
Q Consensus 84 ~~~~~ 88 (98)
=.|.+
T Consensus 86 Y~C~~ 90 (113)
T 1h5b_A 86 YFCAA 90 (113)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 102
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=96.40 E-value=0.0049 Score=43.18 Aligned_cols=66 Identities=24% Similarity=0.281 Sum_probs=41.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCcC-------CCc-eEEEccCcc--EEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNTD-------TGG-KYVVLSSGD--LYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~~-------~dg-KY~vlpsGe--L~Ir~v~~~~~n~ 81 (98)
.|..|.+|+|.|.++..-.. ...|++.. ..++.... ..+ ||.+..++. |.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~---~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~Ds-- 86 (253)
T 3to4_D 12 LVPRGQAVNLRCILKNSQYP---WMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG-- 86 (253)
T ss_dssp EEESSCCEEEEEECSCTTCC---CEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSC--
T ss_pred EEeCCCcEEEEEEeCCCCcc---eEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhC--
Confidence 45689999999987755443 34888731 12221110 123 999887665 99999999885
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
..-.|.+
T Consensus 87 G~Y~C~~ 93 (253)
T 3to4_D 87 RTLYCTS 93 (253)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 3444443
No 103
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=96.38 E-value=0.0038 Score=43.69 Aligned_cols=58 Identities=16% Similarity=0.235 Sum_probs=38.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC-------cCC-CceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN-------TDT-GGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~-------~~~-dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+.+ .. ....|.+.. ..+ +.. ... .+||.+.. ++.|.|++++.+|.
T Consensus 37 ~v~~G~~v~L~C~~~~---~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (268)
T 3pl6_D 37 VTEKGKYVELRCDPIS---GH-TALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDS 112 (268)
T ss_dssp EEETTCCEEEEEBCBT---TC-CEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGC
T ss_pred EecCCCCEEEEEEeCC---CC-ceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccC
Confidence 4678999999999751 22 356898721 111 110 011 28999886 66799999998875
No 104
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=96.34 E-value=0.0011 Score=50.85 Aligned_cols=57 Identities=21% Similarity=0.356 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+. ... ..+|.+++..+.+....++|+.+.++|.|.|++++.+|.
T Consensus 363 ~v~~G~~~~l~C~~~----p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~ 419 (452)
T 3zyi_A 363 NISEGRMAELKCRTP----PMS-SVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDT 419 (452)
T ss_dssp ECCTTSCCEECCBCC----TTS-EEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCC
T ss_pred cccCCCEEEEEEeCC----CCC-cEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHC
Confidence 567899999999975 111 358999774443444456799999999999999988874
No 105
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.34 E-value=0.0018 Score=39.73 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=39.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG--eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+..+-. ....|.+++..|.+. ...++....+| .|.|++++.+|.
T Consensus 20 ~v~~G~~v~l~C~~~g~p~---p~v~W~~~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~ 78 (110)
T 2dm3_A 20 TVQEGKLCRMDCKVSGLPT---PDLSWQLDGKPVRPD--SAHKMLVRENGVHSLIIEPVTSRDA 78 (110)
T ss_dssp EEESSSCBCCEEEEECSSC---CEEECBBSSSBCCCC--SSEEEEECTTSCEEEEESSCCGGGC
T ss_pred EEeCCCEEEEEEEEEEcCC---CEEEEEECCEECCCC--CceEEEEecCCeEEEEEeeCCcccC
Confidence 5678999999999854332 257899998666442 12233444455 799999988775
No 106
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=96.33 E-value=0.0039 Score=42.95 Aligned_cols=69 Identities=10% Similarity=0.266 Sum_probs=45.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCee-------eec-------CcCCCceEEEc-----cCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVN-------IYL-------NTDTGGKYVVL-----SSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~-------I~p-------~~~~dgKY~vl-----psGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|.+.+.-.+-.....|.+++.. ++. .....+|+.+. .++.|.|++++.+|
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 95 (268)
T 3mj6_A 16 RVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKAD 95 (268)
T ss_dssp EEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGG
T ss_pred EEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhH
Confidence 567899999999986554455677889986521 111 11224777764 34899999999877
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ..-.|.+
T Consensus 96 ~--G~Y~C~~ 103 (268)
T 3mj6_A 96 E--GIYTCEI 103 (268)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 3444544
No 107
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=96.33 E-value=0.0036 Score=41.40 Aligned_cols=55 Identities=18% Similarity=0.341 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc--Cc--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS--SG--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp--sG--eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+..+-. ....|++++..|.. +.+|.+.. +| .|.|++++..|.
T Consensus 52 ~v~~G~~v~L~C~~~g~P~---p~v~W~k~g~~~~~----~~~~~~~~~~~~~~~L~I~~v~~~D~ 110 (154)
T 1fhg_A 52 EVVEGSAARFDCKVEGYPD---PEVMWFKDDNPVKE----SRHFQIDYDEEGNCSLTISEVCGDDD 110 (154)
T ss_dssp EEETTSCEEEEEEEEEESC---CEEEEEETTEECCC----SSSEEEEECTTCEEEEEESSCCGGGC
T ss_pred EEeCCCeEEEEEEEEEecC---CEEEEEECCEECCC----CCcEEEEECCCCeEEEEECCCChhcC
Confidence 6789999999999743222 24789999976643 56777752 33 799998887763
No 108
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=96.33 E-value=0.0012 Score=44.02 Aligned_cols=62 Identities=6% Similarity=0.043 Sum_probs=40.9
Q ss_pred ceeecCeEEEEccCCCCcc-ceeEEeEEccCCeeeecC--------cCCCceEEE--ccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS-EYIIVTSWIQDDVNIYLN--------TDTGGKYVV--LSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~-d~V~V~SW~~Dd~~I~p~--------~~~dgKY~v--lpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.++.... ...-.+.|.+++..++.. ....+|..+ ..++.|.|++++.+|.
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~ 77 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDE 77 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGC
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhC
Confidence 4678999999999864422 234568999998544311 112345443 2467899999988774
No 109
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=96.32 E-value=0.0035 Score=41.41 Aligned_cols=55 Identities=11% Similarity=0.169 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC-c---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS-G---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps-G---eL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+-.. ...|.+++..|.+ +++|.+..+ | .|.|.+++.+|.
T Consensus 128 ~v~~g~~~~l~C~~~g~p~p---~v~W~~~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~d~ 186 (212)
T 2r15_A 128 TIQEGKALNLTCNVWGDPPP---EVSWLKNEKALAQ----TDHCNLKFEAGRTAYFTINGVSTADS 186 (212)
T ss_dssp EEETTCCEEEEEEEECSSCC---EEEEEETTEEECC----CSSEEEEEETTTEEEEEESSCCGGGC
T ss_pred EEccCCeEEEEEEEcCCCCc---eEEEEECCeECcc----CCCEEEEEcCCCEEEEEEcCcchHHC
Confidence 66789999999998654333 3789999977754 467777654 4 799998887764
No 110
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=96.30 E-value=0.0031 Score=41.15 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=45.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+..+-.. ..+|.+++..|.+ +.+|.+.++| .|.|.+++.+|.- .-.|.+.
T Consensus 114 ~~~~g~~~~l~C~~~g~p~~---~v~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~a~ 179 (194)
T 2a38_A 114 TVRQGSQVRLQVRVTGIPTP---VVKFYRDGAEIQS----SLDFQISQEGDLYSLLIAEAYPEDSG--TYSVNAT 179 (194)
T ss_dssp EECTTEEEEEEEEEEEESCC---EEEEEETTEECCC----SSSEEEEEETTEEEEEEEEECGGGCE--EEEEEEE
T ss_pred EEcCCCEEEEEEEEEEecCC---eEEEEECCEECCC----CCcEEEEEcCCEEEEEECCCChhcCe--EEEEEEE
Confidence 56789999999998543222 3789999977644 5688888877 5999999887643 3556543
No 111
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.30 E-value=0.00085 Score=42.34 Aligned_cols=58 Identities=19% Similarity=0.229 Sum_probs=41.3
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc-cCc---cEEEEeEeeecC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-SSG---DLYVQIRLSITG 79 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-psG---eL~Ir~v~~~~~ 79 (98)
.+. .|..|.+|.|.|.+...-.. ...|++++..|.+ +++|.+. .+| .|.|++++.+|.
T Consensus 21 ~~~-~v~~G~~v~l~C~~~g~p~p---~v~W~k~g~~l~~----~~~~~~~~~~~~~~~L~I~~v~~~D~ 82 (115)
T 2cr6_A 21 EDV-DVQEGSSATFRCRISPANYE---PVHWFLDKTPLHA----NELNEIDAQPGGYHVLTLRQLALKDS 82 (115)
T ss_dssp CEE-EEETTSCEECCCEEESTTCC---SCEEEESSCEECC----SSSCCBCCBTTTBCCBEECSCCTTTC
T ss_pred ccE-EEeCCCcEEEEEEEcCCCCC---ccEEEECCEECCC----CCcEEEEEcCCCEEEEEEcCCChhhC
Confidence 444 67899999999998533322 3579999977755 4566665 223 699999988774
No 112
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=96.29 E-value=0.0048 Score=41.63 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=32.1
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEe-Eeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQI-RLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~-v~~~~ 78 (98)
++.|.++.|.|.+.+ ... ..|.+++..|.++ ++|.|.|++ ++.+|
T Consensus 11 ~~~G~~v~L~C~~~~-~~~----i~W~k~g~~l~~~----------~~~~L~I~~~~~~~D 56 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DEN----LKWEKNGQELPQK----------HDKHLVLQDFSEVED 56 (186)
T ss_dssp EEETTEEEEECSSCC-CTT----CEEEETTEEECSC----------CCSEEEEESCCTTTS
T ss_pred EeCCcEEEEEEeCCC-CCc----eEEEECCEECCCC----------CCCEEEECCCCcccc
Confidence 458999999999865 333 7899999776442 345677777 66555
No 113
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=96.29 E-value=0.0055 Score=40.78 Aligned_cols=69 Identities=16% Similarity=0.210 Sum_probs=45.2
Q ss_pred ceeecCeEEEEccCCCCcc----ceeEEeEEccCCe------eeecC-------cCCCceEEEccC-----ccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMS----EYIIVTSWIQDDV------NIYLN-------TDTGGKYVVLSS-----GDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~----d~V~V~SW~~Dd~------~I~p~-------~~~dgKY~vlps-----GeL~Ir~v~ 75 (98)
.|..|.+++|.|.+..... .-.....|.+++. .++.. ....||+.+..+ +.|.|++++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 11 TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR 90 (214)
T ss_dssp EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC
Confidence 5678999999999753211 1245688998863 23321 234689998763 479999999
Q ss_pred eecCCcceeeeee
Q psy5692 76 SITGNLSVKKMKV 88 (98)
Q Consensus 76 ~~~~n~~~~~~~~ 88 (98)
.+|. ..-.|.+
T Consensus 91 ~~D~--G~Y~C~~ 101 (214)
T 2zg1_A 91 MEDT--GSYFFRV 101 (214)
T ss_dssp GGGC--EEEEEEE
T ss_pred HhhC--ceEEEEE
Confidence 8775 3444544
No 114
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=96.24 E-value=0.0023 Score=41.82 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=43.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecCc---CCCceEEEcc----CccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNT---DTGGKYVVLS----SGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~---~~dgKY~vlp----sGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.+|+|.|.+.+.-. ....|.+.+ ..|+... ..++||.+.. ++.|.|++++..|. ..-.|.+
T Consensus 49 ~v~~G~~v~L~C~~~~~~~---~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds--G~Y~C~~ 122 (145)
T 1z9m_A 49 TVVAGGTVVLKCQVKDHED---SSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADE--GEYTCSI 122 (145)
T ss_dssp EEETTSCEEEEEECSCCTT---CCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGC--EEEEEEE
T ss_pred EEEcCCCEEEEEEEcCCCC---cEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhC--EEEEEEE
Confidence 5779999999999865442 245798654 3343211 1357888765 67899999998875 2344443
No 115
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=96.23 E-value=0.0036 Score=37.51 Aligned_cols=62 Identities=15% Similarity=0.163 Sum_probs=40.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc--cCc--cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL--SSG--DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl--psG--eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+..+-. ....|.+++..|.+ ++++.+. ..| .|.|.+++.+|. ..-.|..
T Consensus 16 ~v~~G~~v~l~C~~~g~p~---p~v~W~k~g~~~~~----~~~~~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 81 (99)
T 1g1c_A 16 TVGQGSDAHFRVRVVGKPD---PECEWYKNGVKIER----SDRIYWYWPEDNVCELVIRDVTGEDS--ASIMVKA 81 (99)
T ss_dssp EEETTSCEEEEEEEEEESC---CEEEEEETTEECCC----CSSEEEEEEETTEEEEEECSCCGGGC--EEEEEEE
T ss_pred EEcCCCcEEEEEEEEEeCC---CEEEEEECCEECCC----CCCEEEEEcCCCEEEEEECCCCcCCC--EEEEEEE
Confidence 6778999999999743322 24689999977654 3444443 233 699999988774 3444543
No 116
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=96.21 E-value=0.0043 Score=40.20 Aligned_cols=62 Identities=16% Similarity=0.261 Sum_probs=44.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc-CccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS-SGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp-sGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-. ....|.+++..|.+ +++|.+.. ++.|.|++++..|.- .-.|.+
T Consensus 15 ~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~----~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 77 (192)
T 2va4_A 15 TAERGEEMTFSCRASGSPE---PAISWFRNGKLIEE----NEKYILKGSNTELTVRNIINSDGG--PYVCRA 77 (192)
T ss_dssp ETTSCCCEEEECEEECSSC---CEEEEEETTEECCC----SSSEEEETTTTEEEECSCCGGGCE--EEEEEE
T ss_pred EEecCCCEEEEEeeccCCC---CeEEEEECCeEcCC----CccEEEeCCeeEEEEecCChhcCc--EEEEEE
Confidence 5668999999999864432 24789999977644 46787765 556999998887643 445544
No 117
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=96.21 E-value=0.0037 Score=40.80 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=44.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc-CCeeeecCcCCCceEEEc----cCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ-DDVNIYLNTDTGGKYVVL----SSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~-Dd~~I~p~~~~dgKY~vl----psGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-. .....|.+ ++..+.+ .+++|.+. .++.|.|++++.+|.- .-.|.+
T Consensus 13 ~v~~G~~v~l~C~~~~~~~--~~~v~W~~~~g~~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 81 (191)
T 1epf_A 13 EISVGESKFFLCQVAGDAK--DKDISWFSPNGEKLSP---NQQRISVVWNDDDSSTLTIYNANIDDAG--IYKCVV 81 (191)
T ss_dssp EEETTCCEEEEEEECCCSC--CCEEEEECTTSCEECC---BSSSEEEEEEETTEEEEEECSCCGGGCE--EEEEEE
T ss_pred EEcCCCCEEEEEECCCCCC--CceEEEEeCCCccccC---CCCeEEEEECCCCceEEEEccCCcccCE--EEEEEE
Confidence 5779999999999875431 23467999 5566654 35788775 3588999998877642 344544
No 118
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=96.21 E-value=0.0061 Score=39.89 Aligned_cols=69 Identities=17% Similarity=0.125 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccce-eEEeEEccCC----------------eeeec-CcCCCceEEEcc------CccEEEEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEY-IIVTSWIQDD----------------VNIYL-NTDTGGKYVVLS------SGDLYVQI 73 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~-V~V~SW~~Dd----------------~~I~p-~~~~dgKY~vlp------sGeL~Ir~ 73 (98)
.|..|.+++|.|.+...-... .....|.+++ ..+.. .....+|+.+.. ++.|.|++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~ 90 (214)
T 3jz7_A 11 EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTN 90 (214)
T ss_dssp EEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECS
T ss_pred EEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEcc
Confidence 567899999999986543321 2356787732 11111 112367888875 68899999
Q ss_pred EeeecCCcceeeeee
Q psy5692 74 RLSITGNLSVKKMKV 88 (98)
Q Consensus 74 v~~~~~n~~~~~~~~ 88 (98)
++.+|. ..-.|.+
T Consensus 91 v~~~D~--G~Y~C~~ 103 (214)
T 3jz7_A 91 LQLSDI--GTYQCKV 103 (214)
T ss_dssp CCGGGC--EEEEEEE
T ss_pred CChhhC--eEEEEEE
Confidence 988774 3444544
No 119
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=96.20 E-value=0.0033 Score=39.52 Aligned_cols=65 Identities=17% Similarity=0.276 Sum_probs=41.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---eeecCcCCCceEEEc-----cCccEEEEeEeeecCCcceeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---NIYLNTDTGGKYVVL-----SSGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~I~p~~~~dgKY~vl-----psGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
.|..|.+|.|.|.+...... .....|.++. . .+. ..++||.+. .+..|.|++++.+|. +.=-|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds--G~Y~C~ 84 (108)
T 2coq_A 11 TKETGESLTINCVLRDTACA-LDSTNWYRTKLGSTKEQTI---SIGGRYSETVDEGSNSASLTIRDLRVEDS--GTYKCK 84 (108)
T ss_dssp EECTTCCEEEEEEECCSSEE-EEEEEEEEEETTCCCEEEC---CCBTTEEEEEETTTTEEEEEECSCCGGGC--EEEEEE
T ss_pred EEcCCCCEEEEeEeCCCcCC-CCEEEEEEcCCCCCcEEEE---EeCCceEEEEcCCCCEEEEEECCCCcccC--EEEEEE
Confidence 45589999999998644312 2456899874 1 121 136799763 245699999998764 344444
Q ss_pred e
Q psy5692 88 V 88 (98)
Q Consensus 88 ~ 88 (98)
+
T Consensus 85 ~ 85 (108)
T 2coq_A 85 A 85 (108)
T ss_dssp E
T ss_pred E
Confidence 3
No 120
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=96.19 E-value=0.0035 Score=42.43 Aligned_cols=58 Identities=9% Similarity=0.017 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEc-cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVL-SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vl-psGeL~Ir~v~~~~~ 79 (98)
.++.|.+++|.|.+.. . .....|.+++..|... ....+|+.+. ++|.|.|++++.+|.
T Consensus 6 ~~~~G~~VtL~c~~~~---~-~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~Ds 72 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSNV---P-LKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDE 72 (171)
T ss_dssp EEETTCCEEECCCCSS---C-CSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGC
T ss_pred EEEcCCCEEEcCCCCC---C-cceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhC
Confidence 6789999999999732 2 4567899988444311 1134677775 789999999998764
No 121
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=96.16 E-value=0.0013 Score=41.83 Aligned_cols=70 Identities=20% Similarity=0.210 Sum_probs=43.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-e----eeecC---------------------cCCCceEEEcc--CccE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-V----NIYLN---------------------TDTGGKYVVLS--SGDL 69 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~----~I~p~---------------------~~~dgKY~vlp--sGeL 69 (98)
.|..|.+++|.|.+..-...-.....|.+++ . .|+.. .+..+|+.+.. ++.|
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~sL 94 (135)
T 1xt5_A 15 EVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTL 94 (135)
T ss_dssp EEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTSCCE
T ss_pred EEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCCCeE
Confidence 4568999999998732111122357898875 2 12210 11237888764 5789
Q ss_pred EEEeEeeecCCcceeeeeeh
Q psy5692 70 YVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 70 ~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|++++.+|. ..=.|.+.
T Consensus 95 ~I~~v~~~D~--G~Y~C~v~ 112 (135)
T 1xt5_A 95 RLTHVHPQDG--GRYWCQVA 112 (135)
T ss_dssp EECSCCGGGC--EEEEEEEE
T ss_pred EECCCChhhC--cEEEEEEE
Confidence 9999998874 45556554
No 122
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=96.16 E-value=0.0049 Score=40.58 Aligned_cols=65 Identities=14% Similarity=0.235 Sum_probs=45.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc--CCeeeecCcCCCceEEEccCc---cEEEEeEe-eecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ--DDVNIYLNTDTGGKYVVLSSG---DLYVQIRL-SITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~--Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~-~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ..+|.+ ++..+ +....+++|.+..++ .|.|.+++ .+|. ..-.|.+
T Consensus 103 ~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~g~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~--G~Y~C~a 173 (190)
T 2wv3_A 103 NKNEGQDAMMYCKSVGYPHP---EWMWRKKENGVFE-EISNSSGRFFIINKENYTELNIVNLQITEDP--GEYECNA 173 (190)
T ss_dssp EEETTSCEEEEEEEECSSCC---EEEEEEEETTEEE-ECCCTTSCEEEEECSSEEEEEECSCCTTTSC--EEEEEEE
T ss_pred eeeCCCcEEEEEEeCccCCC---ceEEEEcCCCcee-eeecCCCeEEEecCCCeeEEEEEeccccCCC--EEEEEEE
Confidence 67799999999998544332 558999 44444 333467899998765 59999998 5664 2355554
No 123
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=96.15 E-value=0.0016 Score=44.12 Aligned_cols=70 Identities=20% Similarity=0.190 Sum_probs=45.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCee-----eec---------------------CcCCCceEEEcc--CccE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVN-----IYL---------------------NTDTGGKYVVLS--SGDL 69 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~-----I~p---------------------~~~~dgKY~vlp--sGeL 69 (98)
.|..|.+++|.|.+......-.....|.+++.. ++. ..+..||+.+.. ++.|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L 92 (250)
T 2fbo_J 13 EVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTL 92 (250)
T ss_dssp EECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCE
T ss_pred EEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceE
Confidence 466899999999875322122445789988722 222 023467887776 5789
Q ss_pred EEEeEeeecCCcceeeeeeh
Q psy5692 70 YVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 70 ~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|++++.+|. ..-.|.+.
T Consensus 93 ~I~~v~~~D~--G~Y~C~~~ 110 (250)
T 2fbo_J 93 RLTHVHPQDG--GRYWCQVA 110 (250)
T ss_dssp EECSCCGGGC--EEEEEEEE
T ss_pred EEeeCChhhC--eEEEEEec
Confidence 9999998875 44455543
No 124
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=96.11 E-value=0.004 Score=41.78 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeec----CcCCCceEEEccCc---cEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYL----NTDTGGKYVVLSSG---DLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+...-.. ...|++++ ..++. .....+||.+..+| .|.|++++.+|. ..-
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~---~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~Y 85 (210)
T 1lk3_L 11 TVSPGEKLTISCKASESVTS---RMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT--AIY 85 (210)
T ss_dssp EECTTSCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC--EEE
T ss_pred EEcCCCCEEEEeeCCCccCC---CEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC--eEE
Confidence 45689999999998654433 37898742 11221 11235899987654 899999998875 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 86 ~C~~ 89 (210)
T 1lk3_L 86 FCQQ 89 (210)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 125
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=96.10 E-value=0.0013 Score=44.66 Aligned_cols=56 Identities=20% Similarity=0.188 Sum_probs=41.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----------------------------eeeecCcCCCceEEEccCcc-
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----------------------------VNIYLNTDTGGKYVVLSSGD- 68 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----------------------------~~I~p~~~~dgKY~vlpsGe- 68 (98)
.|..|.++.|.|.+..+-.- ..+|.+++ ..| ...++|+.+..+|.
T Consensus 29 ~v~~G~~v~L~C~~~G~P~P---~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~r~~i~~~~~~ 102 (139)
T 1gxe_A 29 VVVAGNKLRLDVPISGDPAP---TVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLL---CETEGRVRVETTKDR 102 (139)
T ss_dssp EESSSSCCCCEEECCSBSCC---EEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCC---CSCSSSCEEEEETTE
T ss_pred EEeCCCeEEEEEEEEEcCCC---eEEEEECCcccccccccccccccccccccccccccceee---cCCCCeEEEEeCCCE
Confidence 56789999999998654432 46899987 222 12467888887776
Q ss_pred --EEEEeEeeecC
Q psy5692 69 --LYVQIRLSITG 79 (98)
Q Consensus 69 --L~Ir~v~~~~~ 79 (98)
|.|++++..|.
T Consensus 103 s~L~I~~v~~~Ds 115 (139)
T 1gxe_A 103 SIFTVEGAEKEDE 115 (139)
T ss_dssp EEEECSCCCTTTC
T ss_pred EEEEECCCCcccC
Confidence 99999988774
No 126
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=96.10 E-value=0.0058 Score=42.72 Aligned_cols=56 Identities=14% Similarity=0.119 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEc-cCCeeeecCcCCCceEEEccCccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWI-QDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~-~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n 80 (98)
.+..|.++.|.|.+.. .. ....+|. .++..|. .+.+|.+.++|.|.|.+++..|.-
T Consensus 102 ~~~~g~~v~l~C~~~~--p~-~~~v~W~~~~g~~l~----~~~~~~~~~~~~L~i~~v~~~d~G 158 (290)
T 2o26_X 102 FGKEDSDALVRCPLTD--PQ-VSQYSLIECDGKSLP----TDLTFVPNPKAGITIKNVKRAYHR 158 (290)
T ss_dssp EEETTSCEEECCCBSC--CS-CEEEEEEETTSCCCC----TTCEEEEETTTEEEEESCCGGGTT
T ss_pred EEecCCeEEEeCcCCC--CC-CceEEEEeCCCcCCC----CCCceeeCCCCCEEEecccHHHCC
Confidence 5668999999999863 12 3667894 5556553 368999999999999999888754
No 127
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=96.09 E-value=0.0043 Score=40.87 Aligned_cols=62 Identities=18% Similarity=0.249 Sum_probs=42.1
Q ss_pred ceeecCeEEEEccC-CCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQI-PSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~I-Ps~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+ ..+-.. ...|.+++..|.. .+.+ ....+|.|.|.+++.+|. ..-.|.+
T Consensus 122 ~~~~g~~~~l~C~~~~~~p~~---~v~W~~~~~~l~~---~~~~-~~~~~~~L~i~~~~~~d~--G~Y~C~a 184 (212)
T 2v9r_A 122 MVAVGEPAVMECQPPRGHPEP---TISWKKDGSPLDD---KDER-ITIRGGKLMITYTRKSDA--GKYVCVG 184 (212)
T ss_dssp EEETTSCEEEECBCCCEESCC---EEEEEETTEEECT---TSTT-EEEETTEEEESSCCGGGC--EEEEEEE
T ss_pred EecCCCcEEEEEecCCCCCCC---EEEEEECCccCCC---Ccce-EEccCCeEEEeeCCHhhC--eeEEEEE
Confidence 56789999999997 322222 4789999977744 2334 445688999999887765 3444544
No 128
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=96.06 E-value=0.0036 Score=47.88 Aligned_cols=64 Identities=8% Similarity=0.048 Sum_probs=47.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc-CCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ-DDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~-Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.++..- ....+|++ |+..|. .+++|.+.++|.|.|.+++..|.- ..-.|.+.
T Consensus 125 ~v~~G~~v~l~C~~~~~~---~~~v~W~~~~g~~l~----~~~~~~~~~~~~L~i~~~~~~d~G-~~Y~C~a~ 189 (524)
T 2ec8_A 125 YGKEDNDTLVRCPLTDPE---VTNYSLKGCQGKPLP----KDLRFIPDPKAGIMIKSVKRAYHR-LCLHCSVD 189 (524)
T ss_dssp CEETTSCEEECCCBSCCC---CSCEEEECSSSCCCC----SSCEEEEETTTEEEEESCCGGGTT-CEEEEEEC
T ss_pred EEEcCCeEEEECcCCCCc---cceEEEEccCCcCcC----CCCceeECCCccEEEeccchhhCC-ceEEEEEE
Confidence 678899999999986422 35668988 555553 367999999999999999987764 13455543
No 129
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=96.05 E-value=0.0033 Score=42.03 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---e-eec----CcCCCceEEEccCc---cEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---N-IYL----NTDTGGKYVVLSSG---DLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~-I~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.++.|.|.+...-.. ..+|.++. . . ++. .....+||.+..+| .|.|++++.+|. ..-
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~Y 86 (213)
T 3d9a_L 12 SVTPGNSVSLSCRASQSIGN---NLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF--GMY 86 (213)
T ss_dssp EECTTCCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC--EEE
T ss_pred EEeCCCcEEEEEECCCCCCC---CEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC--EEE
Confidence 45689999999998655433 37898743 1 1 111 11234799988654 799999998875 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 87 ~C~~ 90 (213)
T 3d9a_L 87 FCQQ 90 (213)
T ss_dssp EEEE
T ss_pred EEee
Confidence 4544
No 130
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=96.04 E-value=0.0096 Score=41.94 Aligned_cols=67 Identities=15% Similarity=0.183 Sum_probs=42.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----eee--e-c------CcCCCceEEEc----cCccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----VNI--Y-L------NTDTGGKYVVL----SSGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~~I--~-p------~~~~dgKY~vl----psGeL~Ir~v~~~~~n 80 (98)
.|+.|.+|+|.|.++.. +-....+|.+++ ..+ + + .....+|..+. .++.|.|++++.+|.
T Consensus 10 tv~~G~~v~L~C~v~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~- 86 (308)
T 4fom_A 10 TAVWGKNVSLKCLIEVN--ETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS- 86 (308)
T ss_dssp EEETTSCEEECCBCCCS--SCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC-
T ss_pred EEEcCCcEEEEEEecCC--CCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC-
Confidence 46789999999998532 334557898764 111 1 1 12245676663 346799999998874
Q ss_pred cceeeeee
Q psy5692 81 LSVKKMKV 88 (98)
Q Consensus 81 ~~~~~~~~ 88 (98)
..-.|.+
T Consensus 87 -G~Y~C~a 93 (308)
T 4fom_A 87 -GKYICKA 93 (308)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEE
Confidence 3444544
No 131
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=96.03 E-value=0.006 Score=44.24 Aligned_cols=65 Identities=18% Similarity=0.329 Sum_probs=47.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ....|.+++..+.+ ...+.++.+.++|.|.|.+++.+|. ..-.|.+
T Consensus 132 ~~~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~~ 196 (403)
T 3laf_A 132 TAFMGDTVLLKCEVIGDPM---PTIHWQKNQQDLNP-IPGDSRVVVLPSGALQISRLQPGDS--GVYRCSA 196 (403)
T ss_dssp EEETTSCEEECCCEECSSC---CEEEEEESSSBCCC-CTTCCSEEECTTSCEEECSCCGGGC--EEEEEEE
T ss_pred EEEcCCeEEEEEEEcccCC---CeEEEEECCEeccc-cCCceEEEEcCCceEEEcccccccC--EEEEEEE
Confidence 5678999999999854322 26789999866643 3356788999999999999988774 3445544
No 132
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=96.03 E-value=0.0046 Score=41.67 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=44.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC---ccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS---GDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps---GeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+..+-.- ..+|.+++..|.+ ....+++.++.+ +.|.|.+++.+|. ..-.|.+.
T Consensus 119 ~~~~g~~v~l~C~~~g~p~p---~v~W~~~g~~l~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a~ 187 (212)
T 2yd6_A 119 VVERTRTATMLCAASGNPDP---EITWFKDFLPVDT-SNNNGRIKQLRSESIGALQIEQSEESDQ--GKYECVAT 187 (212)
T ss_dssp EEETTSCEEEEEEEECSSCC---EEEEEETTEEC-------CCEEEEEETTEEEEEECSCCGGGC--EEEEEEEE
T ss_pred eEecCCCEEEEEEecCCCCC---eEEEEECCccccC-cCCCceEEEEecCCeEEEEEcCCCcccC--EEEEEEEE
Confidence 56679999999998644322 3789999977644 223578877764 8899999887764 34555543
No 133
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=96.03 E-value=0.008 Score=39.68 Aligned_cols=53 Identities=11% Similarity=0.116 Sum_probs=41.1
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC-ccEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS-GDLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps-GeL~Ir~v~~~~~ 79 (98)
+..|.++.|.|.+...- ...+|.+++..+.+ ++++.+.++ +.|.|++++.+|.
T Consensus 122 ~~~g~~v~l~C~~~~~p----p~i~W~~~g~~l~~----~~~~~~~~~~~~L~i~~v~~~d~ 175 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG----ANIQWLFNSQSLQL----TERMTLSQNNSILRIDPIKREDA 175 (208)
T ss_dssp CCTTCCEEEEEECSCTT----CEEEEEETTEECCC----CSSEEEETTTTEEEESSCCGGGC
T ss_pred EeeCCCEEEEEECCCCC----CceEEEECCEeCCC----CCCeEEcCCCCEEEEeccCHHhC
Confidence 67899999999986532 26789999876643 568887764 8899999888773
No 134
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=96.02 E-value=0.0067 Score=37.73 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=44.1
Q ss_pred ceeecCeEEEEccCCCC-ccceeEEeEEccCCe------eee-c---------CcCCCceEEEcc-----CccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSY-MSEYIIVTSWIQDDV------NIY-L---------NTDTGGKYVVLS-----SGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd~------~I~-p---------~~~~dgKY~vlp-----sGeL~Ir~v~ 75 (98)
.|..|.+|+|.|.+.+. -..-.....|.+.+. .++ . .....||+.+.. ++.|.|++++
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 89 (124)
T 1neu_A 10 YGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLD 89 (124)
T ss_dssp EEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCC
T ss_pred EEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCC
Confidence 46689999999997432 111233467877541 122 1 122367888763 4789999999
Q ss_pred eecCCcceeeeeehH
Q psy5692 76 SITGNLSVKKMKVEE 90 (98)
Q Consensus 76 ~~~~n~~~~~~~~~~ 90 (98)
.+|. ..-.|.+..
T Consensus 90 ~~D~--G~Y~C~v~~ 102 (124)
T 1neu_A 90 YSDN--GTFTCDVKN 102 (124)
T ss_dssp GGGC--EEEEEEEEC
T ss_pred hhhC--EEEEEEEEc
Confidence 8874 445565543
No 135
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.02 E-value=0.0019 Score=39.04 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.- ...|.+++..|.+ +..+.....+.|.|++++.+|. ..-.|..
T Consensus 22 ~v~~G~~v~l~C~~~g~p~p---~v~W~~~g~~~~~----~~~~~~~~~~~L~i~~v~~~D~--G~Y~C~a 83 (99)
T 2yr3_A 22 AVIEGQDFVLQCSVRGTPVP---RITWLLNGQPIQY----ARSTCEAGVAELHIQDALPEDH--GTYTCLA 83 (99)
T ss_dssp EECTTCCEEEECEEEEESCC---CCEEEESSSBCSS----CCCEEETTEEEEEECSCCTTCC--BCEEEEE
T ss_pred EEeCCCeEEEEEEEeeeCCC---eEEEEECCEECcc----cceEeeCCeEEEEECCCChhhC--EEEEEEE
Confidence 67899999999997433222 4689999866533 2344444567899999888773 3445543
No 136
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=96.01 E-value=0.011 Score=36.72 Aligned_cols=54 Identities=20% Similarity=0.356 Sum_probs=37.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcC-CCceEEEccCccEEEEeE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTD-TGGKYVVLSSGDLYVQIR 74 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~-~dgKY~vlpsGeL~Ir~v 74 (98)
.+..|.++.|.|.+..+-.- ...|.+++..+.+..+ ...++...++|.|++..+
T Consensus 20 ~v~~G~~v~L~C~~~g~P~p---~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 74 (117)
T 2v9t_A 20 IVSKGEPATLNCKAEGRPTP---TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRI 74 (117)
T ss_dssp EECTTCCEEECCEEEEESCC---EEEEEETTEECCCTTTCSSCSEEECTTSCEEESSC
T ss_pred EEcCCCcEEEEEECCccCCC---eEEEEECCEeccccCCCCcceeEEecCCcEEEEEE
Confidence 57799999999997433222 3789999976654322 234677788999888765
No 137
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=96.01 E-value=0.0036 Score=41.13 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=42.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe-eeec---------CcCCCceEEEc----cCcc--EEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV-NIYL---------NTDTGGKYVVL----SSGD--LYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~-~I~p---------~~~~dgKY~vl----psGe--L~Ir~v~~~~~n~ 81 (98)
.|..|.++.|.|.+...- .....|.+++. .+.. .....+|+... ++|. |.|++++.+|.
T Consensus 6 ~~~~G~~v~L~C~~~~~~---~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~-- 80 (184)
T 2ny1_B 6 LGKKGDTVELTCTASQKK---SIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS-- 80 (184)
T ss_dssp EEETTSCEEECCBCSSSS---CCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGC--
T ss_pred EEeCCCCEEEEEEEcCCC---ceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHC--
Confidence 467899999999976322 23567999873 2221 12235677765 4455 99999988775
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
..-.|.+
T Consensus 81 G~Y~C~~ 87 (184)
T 2ny1_B 81 DTYICEV 87 (184)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 2344443
No 138
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=96.01 E-value=0.004 Score=42.35 Aligned_cols=68 Identities=15% Similarity=0.262 Sum_probs=39.7
Q ss_pred ceeecCeEEEEccCCC-CccceeEEeEEccCC--eee--ecC---------cCCCceEEEcc------CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPS-YMSEYIIVTSWIQDD--VNI--YLN---------TDTGGKYVVLS------SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs-~V~d~V~V~SW~~Dd--~~I--~p~---------~~~dgKY~vlp------sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+.+ .-.+.. ...|.+++ ..+ |.. ....+|...+. ++.|.|++++.+
T Consensus 15 ~v~~G~~v~L~C~v~~~~~~~~~-~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 93 (226)
T 4f80_A 15 LAMVGEDADLPCHLFPTMSAETM-ELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS 93 (226)
T ss_dssp EEETTSCEEEEEEEESCCCCTTS-EEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred EEEcCCcEEEEEEEECCCCCCce-EEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence 3578999999998732 222222 35798876 211 210 11234555443 357999999888
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 94 D~--G~Y~C~a 102 (226)
T 4f80_A 94 DS--GKYLCYF 102 (226)
T ss_dssp GC--EEEEEEE
T ss_pred HC--eeEEEEE
Confidence 75 3444544
No 139
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=96.01 E-value=0.0085 Score=38.49 Aligned_cols=70 Identities=14% Similarity=0.206 Sum_probs=44.5
Q ss_pred ceeecCeEEEEccCCCCc----cceeEEeEEccCCe------eeecCc-------CCCceEEEccC-----ccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYM----SEYIIVTSWIQDDV------NIYLNT-------DTGGKYVVLSS-----GDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V----~d~V~V~SW~~Dd~------~I~p~~-------~~dgKY~vlps-----GeL~Ir~v~ 75 (98)
.|..|.+|+|.|.+.+.. ..-.....|.+... .|+... ...|||.+..+ ..|.|++++
T Consensus 17 ~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 96 (132)
T 1nko_A 17 TVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDAR 96 (132)
T ss_dssp EEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcccC
Confidence 567899999999975221 11124578998762 344321 23589998642 379999999
Q ss_pred eecCCcceeeeeeh
Q psy5692 76 SITGNLSVKKMKVE 89 (98)
Q Consensus 76 ~~~~n~~~~~~~~~ 89 (98)
.+|. +.=-|.+.
T Consensus 97 ~~Ds--G~Y~C~v~ 108 (132)
T 1nko_A 97 MSDA--GRYFFRME 108 (132)
T ss_dssp GGGC--EEEEEEEE
T ss_pred cccC--eeEEEEEE
Confidence 8875 45555554
No 140
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=96.00 E-value=0.0046 Score=42.82 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=46.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc-cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG-DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG-eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ...+|.+++..|.+......+|.+..+| .|.|.+++.+|.- .-.|.+
T Consensus 207 ~~~~g~~v~l~C~~~g~p~---p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G--~Y~C~a 273 (291)
T 1qz1_A 207 TANLGQSVTLVCDADGFPE---PTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEA--EYVCIA 273 (291)
T ss_dssp ETTSCCCEEEEEEEEEESC---CEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCE--EEEEEE
T ss_pred ccccCceEEEEEEEEEeCC---CcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCE--EEEEEE
Confidence 5678999999999753322 2488999998776644445688887654 6999999887743 445554
No 141
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=95.92 E-value=0.0055 Score=41.14 Aligned_cols=55 Identities=16% Similarity=0.358 Sum_probs=38.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+.++-.. ..+|.+++..+.+ .+.+|. ..+|.|.|.+++.+|.
T Consensus 121 ~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~~~~---~~~~~~-~~~~~L~i~~v~~~d~ 175 (212)
T 2yd1_A 121 VIEVGHTVLMTCKAIGNPTP---NIYWIKNQTKVDM---SNPRYS-LKDGFLQIENSREEDQ 175 (212)
T ss_dssp EEETTCCEEECCEEECSSCC---EEEEEETTEECCT---TSTTEE-EETTEEEECSCCGGGC
T ss_pred EeecCCeEEEEEEeccCCCC---eEEEEECCeEccc---CCCeEE-ccCCeEEEccCChhhC
Confidence 45679999999998554332 3789999977654 345664 4577888888776654
No 142
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=95.90 E-value=0.0064 Score=42.92 Aligned_cols=58 Identities=19% Similarity=0.245 Sum_probs=43.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-. ...+|.+++..+.++ ...+++....+|.|.|.+++..|.
T Consensus 119 ~v~~g~~v~l~C~~~g~p~---~~v~W~k~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~ 176 (304)
T 2yd9_A 119 VVERTRTATMLCAASGNPD---PEITWFKDFLPVDPS-ASNGRIKQLRSGALQIESSEETDQ 176 (304)
T ss_dssp EEETTSCEEECCEEECSSC---CEEEEEETTEECCGG-GGTTSEEECTTSCEEECSCCGGGC
T ss_pred EEeCCCeEEEEEECccCCC---CeEEEEECCEECcCC-CCcceEEeCCCeEEEEccCCcccC
Confidence 4668999999999754432 257899999776542 234588888999999999887764
No 143
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=95.87 E-value=0.013 Score=36.83 Aligned_cols=70 Identities=11% Similarity=0.158 Sum_probs=44.0
Q ss_pred ceeecCeEEEEccCCCCcc---ceeEEeEEccCCe----eeecC-------cCCCceEEEcc-----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMS---EYIIVTSWIQDDV----NIYLN-------TDTGGKYVVLS-----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~---d~V~V~SW~~Dd~----~I~p~-------~~~dgKY~vlp-----sGeL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+..... .-.....|.+... .|+-. ....||+.+.. +..|.|++++.+|
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~~~~~v~W~~~~~g~~~~v~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (119)
T 1qfo_A 11 QGLSGSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKDLKPED 90 (119)
T ss_dssp EEETTSCEEECCEEECCTTSCC--CCEEEEEESTTTTCEEEEESSCGGGSCTTTTTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred EEecCCcEEEEEEeeCCCccCCCCCeEEEEEEcCCCCCCEEEECCCCcccCccceeeEEEeCCCCCCEEEEEEccCCccc
Confidence 5679999999999742211 1123468988751 33321 12358998863 2469999999987
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. +.=.|.+.
T Consensus 91 s--g~Y~C~v~ 99 (119)
T 1qfo_A 91 S--GTYNFRFE 99 (119)
T ss_dssp C--EEEEEEEE
T ss_pred C--ceEEEEEE
Confidence 5 45556554
No 144
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=95.86 E-value=0.0051 Score=41.20 Aligned_cols=53 Identities=8% Similarity=0.078 Sum_probs=37.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|....- .. ...|.+|+..+.+ .+.....+|.|.|.+++.+|.
T Consensus 109 ~v~~G~~v~L~C~~~~~---~~-~~~w~k~g~~~~~-----~~~~~~~~~~L~I~~v~~~d~ 161 (188)
T 1oll_A 109 EVISGEKVTFYCRLDTA---TS-MFLLLKEGRSSHV-----QRGYGKVQAEFPLGPVTTAHR 161 (188)
T ss_dssp EEETTCEEEEEEECSSS---CS-EEEEEEESSSCEE-----EEEECSSEEEEEEEECCGGGC
T ss_pred ccccCCEEEEEEEcCCC---CC-EEEEEECCccccc-----cccCCCceeEEEECCCCcCCC
Confidence 57899999999997532 22 4689999855433 123335678999999988775
No 145
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=95.86 E-value=0.0085 Score=39.07 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=44.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc---CCeeeecCcCCCceEEEccCc---cEEEEeEe-eecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ---DDVNIYLNTDTGGKYVVLSSG---DLYVQIRL-SITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~---Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~-~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. .....|.+ ++..+.+ ...++||.+.++| .|.|++++ ..|.- .-.|..
T Consensus 94 ~~~~g~~~~l~C~~~g~p~--~~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G--~Y~C~a 166 (184)
T 3b5h_A 94 HINEGETAMLVCKSESVPP--VTDWAWYKITDSEDKALM-NGSESRFFVSSSQGRSELHIENLNMEADPG--QYRCNG 166 (184)
T ss_dssp EECTTSCEEEEEECCCSSC--CCEEEEEECCSSSCEECC-TTGGGTEEEEEETTEEEEEECSCCTTTSSE--EEEEEE
T ss_pred EEcCCCcEEEEEEECCCCC--CCeEEEEEcCCCCCEEee-cCCCCEEEEEecCCeeEEEEeeccccccCc--eEEEEE
Confidence 5778999999999865431 23458999 4433222 1235899998877 79999998 66643 445544
No 146
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=95.85 E-value=0.006 Score=42.63 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=45.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC-c---cEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS-G---DLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps-G---eL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ...|.+++..|.+ +++|.+..+ | .|.|++++.+|. -.-.|.+
T Consensus 233 ~v~~g~~~~l~C~~~g~p~p---~i~W~~~g~~~~~----~~~~~~~~~~~~~~~L~i~~v~~~d~--G~Y~C~a 298 (317)
T 2y25_A 233 TIQEGKALNLTCNVWGDPPP---EVSWLKNEKALAS----DDHCNLKFEAGRTAYFTINGVSTADS--GKYGLVV 298 (317)
T ss_dssp EEETTSBBCEEEEEECSSCC---EEEEEESSSEECC----CSSEEECCBTTTEEEEEEBSCCSTTC--EEEEEEE
T ss_pred EEEcCCEEEEEEEEecCCCC---EEEEEECCEeCCC----CCcEEEEEcCCCEEEEEECCCCHHHC--EEEEEEE
Confidence 56789999999997543322 3789999977644 578888765 7 899999987764 3355554
No 147
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=95.85 E-value=0.012 Score=40.32 Aligned_cols=65 Identities=12% Similarity=0.088 Sum_probs=39.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC--------------CeeeecCcCCCceEEEccCc----cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD--------------DVNIYLNTDTGGKYVVLSSG----DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D--------------d~~I~p~~~~dgKY~vlpsG----eL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.. +.- .....|++. ...+....-.++||.+...+ .|.|++++.+|.
T Consensus 13 ~v~~G~~v~L~C~~-~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 88 (245)
T 4ei6_B 13 IIDMGQMVTLNCDP-VSN---HLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDS 88 (245)
T ss_dssp EEETTCCEEEEEEC-CTT---CCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGC
T ss_pred EecCCCCEEEEEEc-CCC---CCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHC
Confidence 45689999999943 322 235689872 11111111012899987643 799999998875
Q ss_pred Ccceeeeee
Q psy5692 80 NLSVKKMKV 88 (98)
Q Consensus 80 n~~~~~~~~ 88 (98)
..-.|.+
T Consensus 89 --G~Y~C~~ 95 (245)
T 4ei6_B 89 --AVYFCAS 95 (245)
T ss_dssp --EEEEEEE
T ss_pred --EEEEEEE
Confidence 3444444
No 148
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=95.84 E-value=0.0047 Score=43.05 Aligned_cols=63 Identities=14% Similarity=0.221 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC-ccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS-GDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps-GeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...-.. ...+|.+++..|.+ +++|.+... +.|.|++++.+|. ..-.|.+
T Consensus 232 ~v~~G~~~~l~C~~~~~p~~--~~v~W~~~g~~~~~----~~~~~~~~~~~~L~I~~v~~~d~--G~Y~C~a 295 (312)
T 2y23_A 232 EVTGECNVLLKCKVANIKKE--THIVWYKDEREISV----DEKHDFKDGICTLLITEFSKKDA--GIYEVIL 295 (312)
T ss_dssp EEETTTEEEEEEEEESCCSS--CEEEEEETTEEEEE----ECCC----CEEEEEECSCSGGGC--EEEEEEE
T ss_pred EEeCCCEEEEEEEEcCCCCC--CEEEEeeCCEECCC----CCcEEEECCEEEEEECcCCHHHC--EEEEEEE
Confidence 67799999999998644322 13689999977765 466766643 6899999988774 3455554
No 149
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=95.83 E-value=0.0067 Score=41.86 Aligned_cols=53 Identities=25% Similarity=0.223 Sum_probs=37.3
Q ss_pred eecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeE-eeecC
Q psy5692 20 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIR-LSITG 79 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v-~~~~~ 79 (98)
+.|.++.|.|.-.+ .. ...|.+++..|.. ..+++.+..++|.|.|.++ +..|.
T Consensus 126 ~~G~~v~L~C~g~p-~p----~i~W~k~~~~l~~--~~~~~~~~~~~~~L~I~~v~~~~D~ 179 (204)
T 1sy6_A 126 ISGTTVILTCPQYP-GS----EILWQHNDKNIGG--DEDDKNIGSDEDHLSLKEFSELEQS 179 (204)
T ss_dssp EETTEEEEECSCCC-SS----CEEEEETTEEESC--CTTCTTEEEETTEEEETTCCHHHHC
T ss_pred ecCCcEEEEcCCCC-CC----ceEEEECCEECCC--ccCCceEecCCCEEEEeeCCccccC
Confidence 48999999998321 11 2589999976632 1245556667999999999 77663
No 150
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=95.82 E-value=0.0059 Score=42.49 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=39.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeec----------CcCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYL----------NTDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p----------~~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.++.+-... ....|.+.. ..+.. .....+||.+..++. |.|++++.+
T Consensus 12 ~v~~G~~v~L~C~~~g~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 90 (253)
T 3uzq_A 12 LVKPGASVRLSCTASGFNIKD-TYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSG 90 (253)
T ss_dssp EECTTCCEEEEEEECSSCGGG-SCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCcEEEEEEeeCCcccC-ceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcc
Confidence 566899999999976542111 245787721 11110 112358999886554 999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 91 Ds 92 (253)
T 3uzq_A 91 DT 92 (253)
T ss_dssp GC
T ss_pred cC
Confidence 74
No 151
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=95.79 E-value=0.0038 Score=39.25 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=44.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--------eeeecCc-----CCCceEEEcc-----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--------VNIYLNT-----DTGGKYVVLS-----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--------~~I~p~~-----~~dgKY~vlp-----sGeL~Ir~v~~~~~ 79 (98)
.+..|.+|+|.|.+.+...+ .....|.+.. ..||... ...|||.+.. +..|.|++++.+|.
T Consensus 8 ~~~~G~~v~L~C~~~~~~~~-~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 86 (115)
T 2or7_A 8 QGLAGHPVTLPCIYSTHLGG-IVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDG 86 (115)
T ss_dssp EEETTSCEEECCBCCHHHHC-SCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGC
T ss_pred EEEcCCCEEEEEEeecCCCC-CEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHC
Confidence 45689999999998643222 2346798873 3334221 1367888652 35799999998874
Q ss_pred Ccceeeeeeh
Q psy5692 80 NLSVKKMKVE 89 (98)
Q Consensus 80 n~~~~~~~~~ 89 (98)
..=.|.++
T Consensus 87 --G~Y~C~v~ 94 (115)
T 2or7_A 87 --GPYCCVVE 94 (115)
T ss_dssp --EEEEEEEC
T ss_pred --EEEEEEEE
Confidence 44555554
No 152
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=95.78 E-value=0.0052 Score=41.61 Aligned_cols=61 Identities=15% Similarity=0.286 Sum_probs=39.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC--------cCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN--------TDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~--------~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+..+-... ....|.+.+ ..+ +-. ....+||.+..++. |.|++++.+|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 10 LVTPGTPLTLACTVSGFSLNT-YSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDT 87 (215)
T ss_dssp EECTTCCEEEEEEEESSCTTT-CCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGC
T ss_pred EEcCCCcEEEEEEecCcccCC-CeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccC
Confidence 567899999999985432222 346887632 222 111 12368999887655 99999998874
No 153
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=95.78 E-value=0.0018 Score=42.71 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=41.8
Q ss_pred ceeecCeEEEEccCC-CCccceeEEeEEccCCeeeecCcCCCceEEEcc--------CccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIP-SYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS--------SGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IP-s~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp--------sGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+. ..-. ....|.+++..|.+......++.+.+ ++.|.|++++..|.- .-.|.+
T Consensus 13 ~v~~G~~v~l~C~~~~~~p~---~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~ 87 (195)
T 2c5d_C 13 TGARGLTGTLRCQLQVQGEP---PEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG--QYQCLV 87 (195)
T ss_dssp EECTTCCEEEEEEEEEESSC---CCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE--EEEEEE
T ss_pred EEecCCcEEEecccccCCCC---cEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc--EEEEEE
Confidence 677899999999976 3322 24789999977754211112333344 367999998877642 344544
No 154
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=95.77 E-value=0.0031 Score=48.16 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=40.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...- ....+|.+++..+.+ ....+||.+.++|.|.|++++.+|.
T Consensus 396 ~v~~G~~v~l~C~~~g~P---~p~i~W~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~ 453 (477)
T 2id5_A 396 FVDEGHTVQFVCRADGDP---PPAILWLSPRKHLVS-AKSNGRLTVFPDGTLEVRYAQVQDN 453 (477)
T ss_dssp EEETTCCEEECCCEEEES---CCEEEEECTTSCBC--------CEECTTSCEEESSCCSTTC
T ss_pred EEeCCCeEEEEEeccccC---CCEEEEEECCccccc-cCCCceEEeCCCCEEEEeeCChHHC
Confidence 567899999999974222 234679999855432 2246899999999999999998874
No 155
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=95.76 E-value=0.0046 Score=38.70 Aligned_cols=66 Identities=14% Similarity=0.158 Sum_probs=42.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc----CCCceEEEccC---ccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT----DTGGKYVVLSS---GDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~----~~dgKY~vlps---GeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|+|.|.+.+... ....|.+.. . .++... ...+||.+..+ ..|.|++++.+|. ..=
T Consensus 12 ~v~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds--G~Y 86 (108)
T 1qfw_M 12 SMSVGERVTLSCKASETVD---SFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDF--ADY 86 (108)
T ss_dssp ECCTTCCEEEEEEESSCCC---SCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCC--SEE
T ss_pred EEcCCCCEEEEeeeCCCCC---cEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhC--EEE
Confidence 4668999999999865442 246898753 2 222211 13579988754 3699999998774 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 87 ~C~~ 90 (108)
T 1qfw_M 87 HCGQ 90 (108)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 156
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=95.75 E-value=0.0037 Score=41.78 Aligned_cols=58 Identities=16% Similarity=0.070 Sum_probs=37.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|..+. . -....|.+++..+.+............+|.|.|.+++.+|.
T Consensus 110 ~v~~G~~v~L~C~~~~---~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRS---P-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp EECTTCCEEEEEEEEE---E-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGC
T ss_pred eecCCCeEEEEEecCC---C-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCC
Confidence 4778999999999753 2 23568999985553311000111234578899999887764
No 157
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=95.74 E-value=0.011 Score=38.93 Aligned_cols=53 Identities=11% Similarity=0.146 Sum_probs=37.4
Q ss_pred ecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 21 LGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 21 rGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|.++.|.|.+..+- -.....|.+++..|.+ +++|.+..+|. |.|++++.+|.
T Consensus 16 ~~~~~~l~C~~~~~~--p~~~i~W~~~g~~i~~----~~~~~~~~~~~~~~L~i~~v~~~D~ 71 (212)
T 2r15_A 16 TAEGIQLYSFVTYYV--EDLKVNWSHNGSAIRY----SDRVKTGVTGEQIWLQINEPTPNDK 71 (212)
T ss_dssp CSSEEEEEEEBSSCC--SSCEEEEEETTEECCC----CSSEEEEEETTEEEEEEESCCGGGC
T ss_pred cCceEEEEEEEeccC--CCceEEEEECCEEccC----CCeEEEEEeCCEEEEEECCCCcccC
Confidence 355667777766442 1335789999977755 57888877665 99999988775
No 158
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=95.74 E-value=0.0088 Score=41.66 Aligned_cols=60 Identities=10% Similarity=0.148 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCC-CCccceeEEeEEccCCeeeecCcCCCceEEEccCcc-----EEEEeEeeecCCcceeee
Q psy5692 18 NVILGNTAVLRCQIP-SYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD-----LYVQIRLSITGNLSVKKM 86 (98)
Q Consensus 18 ~VirGNtAVLkC~IP-s~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGe-----L~Ir~v~~~~~n~~~~~~ 86 (98)
.+..|.++.|.|.+. ..-. ...+|.+++..|.+ +++|.+..++. |.|++++.+|.- .-.|
T Consensus 118 ~v~~G~~v~l~C~~~~~~p~---~~v~W~~~~~~i~~----~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C 183 (312)
T 2y23_A 118 EILEKGQVRFWMQAEKLSGN---AKVNYIFNEKEIFE----GPKYKMHIDRNTGIIEMFMEKLQDEDEG--TYTF 183 (312)
T ss_dssp EECSSSCEEEEEEESCCCSS---CEEEEEETTEEECS----SSSCEEEEETTTTEEEEEESCCCGGGCE--EEEE
T ss_pred EEeeCCCEEEEEEEEeCCCC---CEEEEEECCEECee----CCcEEEEEccCCCEEEEEEccCCcccCE--eEEE
Confidence 678999999999976 3332 34579999987755 47787776544 999998877652 4445
No 159
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=95.73 E-value=0.004 Score=41.70 Aligned_cols=66 Identities=17% Similarity=0.259 Sum_probs=42.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e----eeecC----cCCCceEEEccCc---cEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V----NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~----~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+...... ...|+++. . .++.. ....+||.+..++ .|.|++++.+|. ..-
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~Y 84 (212)
T 1nfd_E 10 SVTVGETVKITCSGDQLPKN---FAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE--AAY 84 (212)
T ss_dssp EEETTSCCCEEEEETTGGGS---CCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC--SEE
T ss_pred EEeCCCcEEEEEecCCCCCC---eEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC--EEE
Confidence 45689999999997554433 37898752 1 11211 1235899887543 799999998775 334
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 85 ~C~~ 88 (212)
T 1nfd_E 85 YCLS 88 (212)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 160
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=95.72 E-value=0.0076 Score=41.70 Aligned_cols=62 Identities=19% Similarity=0.384 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc---cCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL---SSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl---psGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+...-. ....|.+++..|.+ +++|.+. .++.|.|.+++..|.- .-.|.+
T Consensus 16 ~~~~G~~v~l~C~~~g~p~---~~v~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~d~G--~Y~C~~ 80 (284)
T 2rik_A 16 DLALGESGTFKCHVTGTAP---IKITWAKDNREIRP----GGNYKMTLVENTATLTVLKVTKGDAG--QYTCYA 80 (284)
T ss_dssp EEETTCCEEEEEEEESSSC---CEEEEEETTEECCS----SSSEEEEEETTEEEEEESSCCGGGCE--EEEEEE
T ss_pred EecCCCcEEEEEEEEcCCC---CEEEEEECCEECcC----CCcEEEEEcCCEEEEEEecCCcccCE--EEEEEE
Confidence 5778999999999864322 25789999977754 4566553 3578999998887753 444544
No 161
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=95.71 E-value=0.0041 Score=39.34 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=41.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---eeecCcCCCceEEEcc-----CccEEEEeEeeecCCcceeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---NIYLNTDTGGKYVVLS-----SGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~I~p~~~~dgKY~vlp-----sGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
.|..|.++.|.|.+....... ....|.++. . .+. ..++||.+.. ++.|.|++++.+|. +.=-|.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds--G~Y~C~ 84 (111)
T 2ywz_A 11 TKETGESLTIKCVLKDHSCGL-SSTTWYRTQLGSTNEKTI---SIGGRYDETVDKGSKSFSLRISDLRVEDS--GTYKCQ 84 (111)
T ss_dssp EECTTCCEEEEEEEESCSSCC-CEEEEEEEETTCCCCEEC---CSBTTEEEEEETTTTEEEEEECSCCGGGC--EEEEEE
T ss_pred EEccCCCEEEEeEECCCCCCC-CEEEEEEeCCCCCceEee---EeCCCEEEEEeCCCCEEEEEECCCChhcC--EEEEEE
Confidence 455899999999985432122 346899863 1 121 1367887642 45699999998764 444454
Q ss_pred e
Q psy5692 88 V 88 (98)
Q Consensus 88 ~ 88 (98)
+
T Consensus 85 ~ 85 (111)
T 2ywz_A 85 A 85 (111)
T ss_dssp E
T ss_pred E
Confidence 4
No 162
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=95.70 E-value=0.018 Score=39.81 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=45.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc-CccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS-SGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp-sGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+..+-.- ..+|.+++..|.+ +.+|.+.. ++.|.|.+++.+|. ..-.|.++
T Consensus 205 ~~~~g~~~~l~C~~~g~p~p---~v~W~~~g~~~~~----~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a~ 268 (291)
T 2wim_A 205 TAERGEEMTFSCRASGSPEP---AISWFRNGKLIEE----NEKYILKGSNTELTVRNIINSDG--GPYVCRAT 268 (291)
T ss_dssp CSSSCCEEEEECBCCCBSCC---EEEEEETTEECCC----TTTEEECSTTCEEEEESCCSTTC--EEEEEEEE
T ss_pred eecCCCeEEEEEEeecCCCC---eEEEEECCEECcC----CccEEEcCCccEEEEeeCCcccC--EEEEEEEE
Confidence 45689999999998755332 3789999977644 45777754 67899999887764 35556543
No 163
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=95.70 E-value=0.01 Score=41.05 Aligned_cols=63 Identities=19% Similarity=0.296 Sum_probs=45.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+..+-. ...+|.+++..|.+ +.+|.+.+.| .|.|.+++.+|. ..-.|.+.
T Consensus 203 ~~~~g~~v~l~C~~~g~p~---~~v~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~d~--G~Y~C~a~ 268 (284)
T 2rik_A 203 ETLKGADVHLECELQGTPP---FQVSWHKDKRELRS----GKKYKIMSENFLTSIHILNVDSADI--GEYQCKAS 268 (284)
T ss_dssp EECTTCCEEEEEECBSSSC---CEEEEEETTEEECB----TTTEEEEEETTEEEEEECSCCGGGC--EEEEEEEE
T ss_pred eecCCCeEEEEEEEEecCC---CEEEEEECCEECcC----CCCEEEEEcCCEEEEEEcCCCcccC--EEEEEEEE
Confidence 4678999999999865433 34789999977754 5688887654 788999887764 34555543
No 164
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=95.70 E-value=0.012 Score=36.65 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc----CCCceEEEccCc---cEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT----DTGGKYVVLSSG---DLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~----~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|+|.|.+...... ...|.+.. . .++... ...+||.+..++ .|.|++++.+|. +.=
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~---~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds--G~Y 86 (107)
T 1i8k_A 12 SVATGEKVTIRCMTSTDIDD---DMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDV--GDY 86 (107)
T ss_dssp ECCTTCCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC--EEE
T ss_pred EecCCCCEEEEEEECCCCCC---cEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHC--EEE
Confidence 45689999999998654422 35898753 1 233211 236799886543 699999998774 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 87 ~C~~ 90 (107)
T 1i8k_A 87 YCLQ 90 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 165
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=95.70 E-value=0.0038 Score=43.22 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=46.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+...-. ....+|.+.+ ..+ + .+.+|.+.++|.|.|.+++.+|. ..-.|.+.
T Consensus 100 ~v~~g~~v~L~C~~~~~~~--~~~v~W~~~~~~~~-~---~~~~~~~~~~~~L~i~~v~~~d~--G~Y~C~a~ 164 (289)
T 3ejj_X 100 TVVEGQEAVLPCLITDPAL--KDSVSLMREGGRQV-L---RKTVYFFSPWRGFIIRKAKVLDS--NTYVCKTM 164 (289)
T ss_dssp EEETTSCEEECEEESCGGG--GGSEEEEEGGGEEC-C---TTCCEEEETTTEEEESSCCGGGC--EEEEEEEE
T ss_pred EEecCCceEeEEEccCCCc--ceEEEEEecCCeec-C---CCccEEECCCCCEEEeecccccC--EEEEEEEE
Confidence 6778999999999864221 1226798655 544 3 36799999999999999988875 34566554
No 166
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=95.69 E-value=0.0049 Score=41.91 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=43.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC-----------cCCCceEEEccCcc-----EEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN-----------TDTGGKYVVLSSGD-----LYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~-----------~~~dgKY~vlpsGe-----L~Ir~v~ 75 (98)
.|..|.+++|.|.+..+-... ....|++.. ..+ +-. ....|||.+..++. |.|++++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 89 (221)
T 3m8o_H 11 LVQPGGSLKLSCAASGFTLSG-SNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLK 89 (221)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCC
T ss_pred EEcCCCCEEEEEEcccccccc-cEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCC
Confidence 566899999999986432222 356897642 111 111 12358999986553 9999999
Q ss_pred eecCCcceeeeee
Q psy5692 76 SITGNLSVKKMKV 88 (98)
Q Consensus 76 ~~~~n~~~~~~~~ 88 (98)
.+|. ..-.|.+
T Consensus 90 ~~Ds--G~Y~C~~ 100 (221)
T 3m8o_H 90 SDDT--AMYYCVI 100 (221)
T ss_dssp GGGC--EEEEEEE
T ss_pred HHHC--EEEEEEE
Confidence 8874 4445544
No 167
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=95.68 E-value=0.0047 Score=47.99 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccC-CCCccceeEEeEEccCCe--eeec------CcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQI-PSYMSEYIIVTSWIQDDV--NIYL------NTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~I-Ps~V~d~V~V~SW~~Dd~--~I~p------~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.+++|.|.+ ++.- ....+|.+++. .++. .....+|+.+.++|.|.|++++.+|.
T Consensus 377 ~~~~G~~v~L~C~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~ 444 (581)
T 3o3u_N 377 TARIGEPLVLKCKGAPKKP---PQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDE 444 (581)
T ss_dssp EEETTSCEEECCTTCCSSS---SCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGC
T ss_pred ceecCCcEEEeeeecCCCC---CceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccC
Confidence 67799999999998 3322 23578998863 2221 01236799999999999999998874
No 168
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=95.67 E-value=0.0083 Score=41.92 Aligned_cols=57 Identities=21% Similarity=0.347 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc--cCc--cEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL--SSG--DLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl--psG--eL~Ir~v~~~~~n 80 (98)
.|..|.++.|.|.+...-. ....|.+++..+.+ .+.+|.+. ..| .|.|++++.+|.-
T Consensus 15 ~v~~G~~v~l~C~~~g~p~---~~v~W~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~v~~~d~G 75 (305)
T 2nzi_A 15 NVRYQSNATLVCKVTGHPK---PIVKWYRQGKEIIA---DGLKYRIQEFKGGYHQLIIASVTDDDAT 75 (305)
T ss_dssp EECTTCCEEEEEEEECSSC---CEEEEEETTEECCC---CSSSEEEEEETTTEEEEEESSCCGGGCS
T ss_pred EEeCCCcEEEEEEEeCCCC---CeEEEEECCEEccc---CCCeEEEEECCCCEEEEEEccCChhhCe
Confidence 6778999999999743322 35789999977754 35677764 344 7999999887753
No 169
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=95.67 E-value=0.021 Score=40.29 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=46.1
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccCC----eeee---------cCcCCCceEEEc----cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQDD----VNIY---------LNTDTGGKYVVL----SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~Dd----~~I~---------p~~~~dgKY~vl----psGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...-.+ -.....|.+++ ..+. ......+|+.+. .++.|.|++++..|.
T Consensus 25 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 104 (331)
T 3u83_A 25 YGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDE 104 (331)
T ss_dssp EEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGC
T ss_pred EEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccC
Confidence 67899999999998654222 45568899953 1111 012356888876 478899999988775
Q ss_pred Ccceeeeee
Q psy5692 80 NLSVKKMKV 88 (98)
Q Consensus 80 n~~~~~~~~ 88 (98)
..-.|.+
T Consensus 105 --G~Y~C~~ 111 (331)
T 3u83_A 105 --GVYICEF 111 (331)
T ss_dssp --EEEEEEE
T ss_pred --cEEEEEE
Confidence 3455553
No 170
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=95.67 E-value=0.013 Score=40.74 Aligned_cols=56 Identities=13% Similarity=0.207 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC---c--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS---G--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps---G--eL~Ir~v~~~~~ 79 (98)
-|+.|.++.|.|.+... .=-...+|++++..|.+ +.+|.+..+ | .|.|++++.+|.
T Consensus 13 ~v~eg~~v~l~c~~~~~--~P~p~i~W~kng~~l~~----~~~~~~~~~~~~g~~~L~I~~v~~~D~ 73 (207)
T 3rbs_A 13 EILEKGQVRFWMQAEKL--SGNAKVNYIFNEKEIFE----GPKYKMHIDRNTGIIEMFMEKLQDEDE 73 (207)
T ss_dssp EECGGGCEEEEEECSCC--CSCCEEEEEETTEEECS----SSSCEEEECTTTCEEEEEESCCCGGGC
T ss_pred EEEeCCeEEEEEEEecC--CCCCEEEEEECCEECcc----CCCEEEEEeCCCCEEEEEECCCChhhC
Confidence 57889999999987421 11134589999988866 456666544 3 599999988874
No 171
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=95.66 E-value=0.011 Score=40.60 Aligned_cols=65 Identities=12% Similarity=0.021 Sum_probs=40.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e-------cCcCCCceEEEccC----ccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y-------LNTDTGGKYVVLSS----GDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~-------p~~~~dgKY~vlps----GeL~Ir~v~~~~~n 80 (98)
.|..|.+|+|.|.+.. .. ....|++.. ..+ + ......+||.+..+ +.|.|++++.+|.
T Consensus 13 ~v~~G~~v~L~C~~~~---~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~- 87 (240)
T 3q5y_A 13 IKEKGGRSVLTCIPIS---GH-SNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDS- 87 (240)
T ss_dssp EEETTCCEEEEEECCT---TC-CEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGC-
T ss_pred eecCCCcEEEEEEeCC---CC-ceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHC-
Confidence 4668999999999753 22 256898721 111 1 11123479988753 3599999998874
Q ss_pred cceeeeee
Q psy5692 81 LSVKKMKV 88 (98)
Q Consensus 81 ~~~~~~~~ 88 (98)
..-.|.+
T Consensus 88 -G~Y~C~~ 94 (240)
T 3q5y_A 88 -AMYFCAS 94 (240)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEE
Confidence 3444444
No 172
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=95.66 E-value=0.0075 Score=40.46 Aligned_cols=56 Identities=20% Similarity=0.285 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc--Cc--cEEEEeEee-ecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS--SG--DLYVQIRLS-ITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp--sG--eL~Ir~v~~-~~~ 79 (98)
.|..|.++.|.|.+...-.. ...|.+++..|.. .++||.+.. +| .|.|.+++. .|.
T Consensus 17 ~v~~G~~v~l~C~~~g~p~~---~v~W~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~v~~~~d~ 77 (212)
T 2yd1_A 17 GVRVGGVASFYCAARGDPPP---SIVWRKNGKKVSG---TQSRYTVLEQPGGISILRIEPVRAGRDD 77 (212)
T ss_dssp EEETTSCEEEEEEEECSSCC---EEEEEETTEECCT---TSTTEEEEEETTTEEEEEESSCCTTTTC
T ss_pred EEecCCEEEEEEEEccCCCC---eEEEEECCEECCC---CcceeEEEEcCCCeEEEEEEecCCCCcC
Confidence 57799999999997543322 6789999976643 367777753 43 688888876 543
No 173
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=95.65 E-value=0.0081 Score=40.66 Aligned_cols=68 Identities=16% Similarity=0.071 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEcc---CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLS---SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+...-.... ..+|.+++ . .+|.. ....+||.+.. ++.|.|++++.+|. ..-
T Consensus 30 ~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~Y 106 (234)
T 2j6e_L 30 SGTPGQRVTISCSGSSSNIGSN-YVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDE--ADY 106 (234)
T ss_dssp CBCTTCEEEEEEECCTTTTTTS-CCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTC--SEE
T ss_pred EeeCCCcEEEEEEecCCCCCCC-eEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHC--EEE
Confidence 5779999999999864322211 26898753 1 22211 12357898874 34799999998775 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 107 ~C~~ 110 (234)
T 2j6e_L 107 YCAT 110 (234)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 174
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=95.64 E-value=0.0052 Score=41.67 Aligned_cols=61 Identities=13% Similarity=0.209 Sum_probs=39.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--cC---------cCCCceEEEcc-----CccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--LN---------TDTGGKYVVLS-----SGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p~---------~~~dgKY~vlp-----sGeL~Ir~v~ 75 (98)
.|..|.+|+|.|.+..+-.. ....+|+++. ..| + .. ....+||.+.+ ++.|.|++++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 89 (222)
T 1q9r_B 11 LVQSGGSLRLSCATSGFTFT-DYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR 89 (222)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred eEcCCCEEEEEEEecCccCC-CCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCC
Confidence 56789999999998543211 1345898753 111 1 11 12358999875 3489999999
Q ss_pred eecC
Q psy5692 76 SITG 79 (98)
Q Consensus 76 ~~~~ 79 (98)
.+|.
T Consensus 90 ~~D~ 93 (222)
T 1q9r_B 90 AEDS 93 (222)
T ss_dssp GGGC
T ss_pred cccC
Confidence 8875
No 175
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=95.64 E-value=0.011 Score=42.58 Aligned_cols=56 Identities=14% Similarity=0.149 Sum_probs=41.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+-. ....+|.+++..+.. .+.+|... ++.|.|++++.+|.
T Consensus 139 ~~~~G~~v~L~C~~~g~p~--~~~i~W~k~~~~l~~---~~~~~~~~-~~~L~I~~v~~~D~ 194 (329)
T 3oq3_B 139 GTHDKYGIDLYCGILYAKH--YNNITWYKNNQELII---DGTKYSQS-GQNLIIHNPELEDS 194 (329)
T ss_dssp TSSTTTCEEEECCCCSCCC--CCEEEEEETTEECCC---SSSSEEEE-TTEEEECSCCGGGC
T ss_pred EEeCCCcEEEEeccCCCCC--CceEEEEECCccCCC---CCceEecC-CCEEEEeecChhhC
Confidence 4567999999998764321 345789999976632 35688777 89999999887763
No 176
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=95.63 E-value=0.0064 Score=41.02 Aligned_cols=68 Identities=15% Similarity=0.237 Sum_probs=42.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---ee-ecC---------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---NI-YLN---------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~I-~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-... ....|.+++ . .+ +-. ....+||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (219)
T 1c1e_H 11 LKKPGETVKISCKASGYMFTN-YGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNE 89 (219)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEEeCccccc-ceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence 456899999999986442111 346898763 1 11 111 12358999875 368999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 90 D~--G~Y~C~~ 98 (219)
T 1c1e_H 90 DM--ATYFCAR 98 (219)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 75 3334444
No 177
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=95.62 E-value=0.019 Score=41.54 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=43.8
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccC--CeeeecC-cCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQD--DVNIYLN-TDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~D--d~~I~p~-~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.+. .++.|.++.|.|.+...-. ....|.++ +..|.+. ...++||.+.. +|.|.|++++.+|.
T Consensus 8 ~~~-~~~~G~~v~l~C~~~g~p~---p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 75 (389)
T 2jll_A 8 KNE-TTYENGQVTLVCDAEGEPI---PEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDS 75 (389)
T ss_dssp CCE-EEETTSEEEEEEEEECSSC---CEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGC
T ss_pred Cce-EEeCCCeEEEEEEeecccC---CeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhC
Confidence 344 6788999999999754322 23589999 5666432 12378999874 57899999988765
No 178
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=95.59 E-value=0.0066 Score=40.51 Aligned_cols=59 Identities=17% Similarity=0.287 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+.... .....|.+++ ..+ +.. ...++||.+.++| .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3nl4_L 12 SEPVGGTVTIKCQASQSI---SSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADA 83 (213)
T ss_dssp EEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEcCCCCEEEEEEecCCC---CceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHC
Confidence 567899999999986552 3346798742 122 211 1236899988654 799999998775
No 179
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=95.55 E-value=0.0063 Score=39.89 Aligned_cols=66 Identities=9% Similarity=0.054 Sum_probs=44.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeee--------cCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIY--------LNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~--------p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|..|.++.|.|.+... -.....|.+++..+. .....++|+.+.. +.|.|++++..|.- .-.|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~---p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~v~~~D~G--~Y~C~~~ 85 (212)
T 1f97_A 12 QVPENESIKLTCTYSGF---SSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-SGITFSSVTRKDNG--EYTCMVS 85 (212)
T ss_dssp EEETTCCEEEECEEESC---SSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-TEEEESCCCGGGCE--EEEEEEE
T ss_pred EEEcCCCEEEEeEeCCC---CCcEEEEEECCCceeeEEecCCcccccccCcEEeec-eeEEEcccCcccCe--EEEEEEE
Confidence 46789999999998643 234678999873321 0122467887765 99999999887653 4455543
No 180
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.54 E-value=0.0066 Score=36.73 Aligned_cols=49 Identities=27% Similarity=0.348 Sum_probs=33.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-. ....|.+++..+... +++.|.|.+++.+|.
T Consensus 21 ~v~~G~~v~l~C~~~g~p~---~~v~W~k~~~~~~~~----------~~~~L~i~~v~~~d~ 69 (96)
T 2ens_A 21 AVAPGGTVTLTCEVPAQPS---PQIHWMKDGVPLPLP----------PSPVLILPEIGPQDQ 69 (96)
T ss_dssp EECTTCEEEEECCCSSCSS---CCCCCEESSSBCSSC----------CCSEEEEESCCTTTC
T ss_pred EEcCCCeEEEEEEEccCCC---CEEEEEECCEECcCC----------CCCEEEECCCCcccC
Confidence 5789999999999854333 245899988665331 246777777766653
No 181
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=95.52 E-value=0.0085 Score=41.65 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccc--eeEEeEEccCC------eeeec----CcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE--YIIVTSWIQDD------VNIYL----NTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d--~V~V~SW~~Dd------~~I~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...... -.....|.+++ ..+|. .....+||.+..+| .|.|++++.+|.
T Consensus 45 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 121 (252)
T 3bkj_L 45 PVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDL 121 (252)
T ss_dssp EECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccC
Confidence 46799999999998644311 12346898753 12221 11235899988765 799999998875
No 182
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=95.51 E-value=0.0064 Score=42.80 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.+..+-... ....|++.. ..+ +-. ....|||.+..++. |.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (253)
T 3liz_H 11 LVQPGGSLKLSCAASGFTFSS-FAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSE 89 (253)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGG
T ss_pred EECCCCcEEEEEEeeCccccC-ceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 577899999999986432222 235787642 122 111 12358999986554 999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 90 Ds--G~Y~C~~ 98 (253)
T 3liz_H 90 DT--AMYYCTR 98 (253)
T ss_dssp GC--EEEEEEE
T ss_pred hC--EEEEEEE
Confidence 74 3444444
No 183
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=95.51 E-value=0.012 Score=40.41 Aligned_cols=59 Identities=15% Similarity=0.297 Sum_probs=40.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...-.. ...|.+++ ..| +.. ....+||.+.+++ .|.|++++.+|.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~---~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 86 (250)
T 3esu_F 15 SASLGDRVTISCRASQDIRN---YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDI 86 (250)
T ss_dssp EECTTCCEEEEEEESSCCTT---CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EeeCCCcEEEEEEecccCCc---eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhC
Confidence 45689999999998665554 45798753 222 211 1236899876654 799999988774
No 184
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=95.50 E-value=0.0081 Score=40.64 Aligned_cols=66 Identities=11% Similarity=0.150 Sum_probs=42.5
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCc--------------------CCCceEEEccCccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNT--------------------DTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~--------------------~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
+..|.++.|.|.+...-.. ...|.+++..|.... ...++.....++.|.|++++.+|
T Consensus 148 v~~g~~v~L~C~~~g~p~p---~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 224 (250)
T 2fbo_J 148 VDEGNDITMTCPCTDCANA---NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITD 224 (250)
T ss_dssp CCTTCCEEECCCEESCTTC---EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGG
T ss_pred ecCCCcEEEEEEecCCCCC---eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCccc
Confidence 4469999999998654444 678999986552211 11233333356899999999887
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ..-.|...
T Consensus 225 ~--G~Y~C~a~ 233 (250)
T 2fbo_J 225 A--GRVWCELA 233 (250)
T ss_dssp C--EEEEEEEE
T ss_pred C--EEEEEEec
Confidence 4 34555543
No 185
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=95.48 E-value=0.0091 Score=37.08 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC----cCCCceEEEccC---ccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSS---GDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|.|.|.+..... ....|.+.+ ..++.. ....+||.+..+ +.|.|++++.+|. ..=
T Consensus 12 ~~~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds--G~Y 86 (108)
T 1jhl_L 12 VASPGETITINCRASKSIS---KSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDF--AMY 86 (108)
T ss_dssp EECTTSCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCC--SEE
T ss_pred EEcCCCCEEEEeEECCCCC---ceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHC--EEE
Confidence 4568999999999865542 246898753 123321 123579988653 4799999998774 334
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 87 ~C~~ 90 (108)
T 1jhl_L 87 ICQQ 90 (108)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 186
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=95.48 E-value=0.012 Score=39.65 Aligned_cols=47 Identities=11% Similarity=0.145 Sum_probs=34.3
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
+..|.++.|.|.+|. -..+|++|+..|.+... .++.|.|.+++..|.
T Consensus 119 ~~~G~~v~l~C~~p~------p~i~W~k~g~~i~~~~~--------~~~~L~i~~v~~~D~ 165 (186)
T 1jbj_A 119 SRGDGSVLLTCGLTD------KTIKWLKDGSIISPLNA--------TKNTWNLGNNAKDPR 165 (186)
T ss_dssp CSSSCEEEEECSSSC------SCEEEEETTEECCCSSC--------CSSCCEEEETTSCCE
T ss_pred cCCCCeEEEEeeCCC------CeEEEEECCEECcccCC--------CcceEEECCCCcCcC
Confidence 348999999999963 24689999977744211 577888888877663
No 187
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=95.46 E-value=0.012 Score=38.12 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc-----CccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS-----SGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp-----sGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+...-. ....|.+++..+.+ +.++.+.. ++.|.|++++.+|.- .-.|.+.
T Consensus 13 ~v~~G~~v~l~C~~~~~p~---~~v~W~k~~~~~~~----~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~~~ 80 (182)
T 1rhf_A 13 TVSQGQPVKLNCSVEGMEE---PDIQWVKDGAVVQN----LDQLYIPVSEQHWIGFLSLKSVERSDAG--RYWCQVE 80 (182)
T ss_dssp EEETTCCEEEEEEEESCSS---CCEEEEETTEECCS----SEEEEEEEETTEEEEEEEESSCCGGGCE--EEEEEES
T ss_pred EEeCCCcEEEEEEEeCCCC---CeEEEEECCeecCC----CCceEEEecCCCceEEEEEeecCcccCe--EEEEEEE
Confidence 5678999999999864222 24689999877654 34444433 367999998887653 4555554
No 188
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=95.44 E-value=0.0076 Score=37.72 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEcc---CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLS---SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|+|.|.+...... ...|.+.+ . .++.. ....+||.+.. ++.|.|++++.+|. ..=
T Consensus 14 ~v~~G~~v~L~C~~~~~~~~---~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds--G~Y 88 (109)
T 2q20_A 14 SASVGDRVTITCQASQDISN---YLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDI--ATY 88 (109)
T ss_dssp EECTTCCEEEEEEESSCCTT---CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC--EEE
T ss_pred EecCCCcEEEEEeeccCCCC---cEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhC--EEE
Confidence 45689999999998654422 35798763 1 22221 12367998864 34699999998774 444
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 89 ~C~~ 92 (109)
T 2q20_A 89 YCQQ 92 (109)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4544
No 189
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=95.44 E-value=0.0065 Score=41.89 Aligned_cols=69 Identities=16% Similarity=0.224 Sum_probs=43.7
Q ss_pred ceeecCeEEEEccCCCCccc--eeEEeEEccCC--e----eeec----CcCCCceEEEccCc---cEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSE--YIIVTSWIQDD--V----NIYL----NTDTGGKYVVLSSG---DLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d--~V~V~SW~~Dd--~----~I~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|+|.|.+...-.. --....|.++. . .+|. .....+||.+..+| .|.|++++.+|. .
T Consensus 49 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G 126 (254)
T 2c1o_A 49 SVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDL--G 126 (254)
T ss_dssp EECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC--S
T ss_pred EecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccC--E
Confidence 56789999999998644310 01347898642 1 1221 12235899988655 799999998886 3
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
.-.|.+
T Consensus 127 ~Y~C~a 132 (254)
T 2c1o_A 127 IYYCVQ 132 (254)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444444
No 190
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=95.43 E-value=0.013 Score=38.54 Aligned_cols=32 Identities=22% Similarity=0.439 Sum_probs=24.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI 51 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I 51 (98)
.|..|.++.|.|.+...-... ...|.+++..+
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~--~~~W~~~~~~~ 49 (175)
T 1fnl_A 18 SVLEKDSVTLKCQGAYSPEDN--STQWFHNESLI 49 (175)
T ss_dssp EEETTCCEEEEEECCCBTTBC--CCEEEETTEEE
T ss_pred eeeCCCcEEEEeeCCCCCCCc--ceEEEECCEEc
Confidence 578999999999987654332 56899988555
No 191
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=95.42 E-value=0.01 Score=41.29 Aligned_cols=68 Identities=10% Similarity=0.148 Sum_probs=41.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e---------cCcCCCceEEEccCc-----cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y---------LNTDTGGKYVVLSSG-----DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~---------p~~~~dgKY~vlpsG-----eL~Ir~v~~~ 77 (98)
.|..|.+++|.|.+..+-.. .....|.+.. ..| + ......+||.+..++ .|.|++++.+
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 95 (256)
T 3juy_B 17 VKKPGASVKVSCQASGYRFS-HFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSA 95 (256)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCeEEEEEEeeccccc-CceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcc
Confidence 56789999999998653111 1235787532 111 1 112245899998543 3999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 96 Ds--G~Y~C~~ 104 (256)
T 3juy_B 96 DT--AVYYCAR 104 (256)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEeE
Confidence 74 4444544
No 192
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=95.41 E-value=0.0051 Score=39.22 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=41.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---eeecCcCCCceEEEc-----cCccEEEEeEeeecCCcceeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---NIYLNTDTGGKYVVL-----SSGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~I~p~~~~dgKY~vl-----psGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
.|..|.+|.|.|.+.+..... ....|.++. . .++ ..++||.+. .+..|.|++++.+|. +.=-|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~g~~~~~~~---~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds--G~Y~C~ 84 (113)
T 1sq2_N 11 TKETGESLTINCVLRDASYAL-GSTCWYRKKSGEGNEESI---SKGGRYVETVNSGSKSFSLRINDLTVEDG--GTYRCG 84 (113)
T ss_dssp EECTTCCEEEEEEECSCSSCC-CCEEEEEEETTSCCCEEC---CCBTTEEEEEETTTTEEEEEECSCCGGGC--EEEEEE
T ss_pred EEecCCCEEEEEEECCCcCCC-CEEEEEEeCCCCCceEeE---EeCCCEEEEEeCCCCEEEEEECCCChhhC--EEEEEE
Confidence 345899999999986443221 346798863 1 122 135799774 244699999998764 444454
Q ss_pred e
Q psy5692 88 V 88 (98)
Q Consensus 88 ~ 88 (98)
+
T Consensus 85 ~ 85 (113)
T 1sq2_N 85 L 85 (113)
T ss_dssp E
T ss_pred E
Confidence 4
No 193
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=95.40 E-value=0.011 Score=42.73 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=43.9
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEcc-CCeeeecCcCCCceEEEccCccEEEEeEeeecC----Ccceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQ-DDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG----NLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~-Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~----n~~~~~~~~~ 89 (98)
+..|.+++|.|.+...-. ...+|.+ |...|.+ ..+.+.+.++|.|.|.+++.+|. ++..-.|...
T Consensus 16 ~~~G~~v~l~C~~~g~p~---p~v~W~k~~g~~~~~---~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~ 85 (388)
T 2v5m_A 16 FSNSTGAEIECKASGNPM---PEIIWIRSDGTAVGD---VPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLAR 85 (388)
T ss_dssp EETTTCEEEECEEEEESC---CEEEEEETTSCBCCC---BTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEE
T ss_pred EEcCccEEEEEECCCCCC---CEEEEEcCCCCcccc---CCCceEEcCCceEEecccChhhccccccCceEEEEEE
Confidence 447999999999743221 2568999 5565533 24566778999999999998872 2345555543
No 194
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.40 E-value=0.0088 Score=37.46 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=36.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-. -...|.+++..|. ++++.+.. ++.|.|++++.+|.
T Consensus 35 ~v~~G~~~~l~C~~~g~P~---p~i~W~k~g~~l~-----~~~~~~~~~~~~~~L~i~~~~~~D~ 91 (118)
T 2e7c_A 35 IRKVGEQLNLVVPFQGKPR---PQVVWTKGGAPLD-----TSRVHVRTSDFDTVFFVRQAARSDS 91 (118)
T ss_dssp EEESSSCEEEEEEEEEESC---CEEEEEETTEECC-----CSSCEEEECSSEEEEEESSCCTTTC
T ss_pred EEECCCEEEEEEEEccCCC---CEEEEEECCEECC-----CCcEEEEECCCeEEEEECCCChhcC
Confidence 5678999999998743222 2468999997662 24555543 23399999888774
No 195
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=95.40 E-value=0.008 Score=41.25 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=41.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC----C--eeeecC---------cCCCceEEEcc----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD----D--VNIYLN---------TDTGGKYVVLS----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D----d--~~I~p~---------~~~dgKY~vlp----sGeL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+...- .....|++. . ..++.. ....+||.+.. ++.|.|++++.+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 88 (246)
T 4dzb_B 12 ISKSGTSVKIECRSLDFQ---ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPED 88 (246)
T ss_dssp EEETTSCEEEEEEESSSC---CCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEeEecCCC---ceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHH
Confidence 466899999999876552 234578872 1 111111 11238999875 3369999999887
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ..-.|.+
T Consensus 89 ~--G~Y~C~~ 96 (246)
T 4dzb_B 89 S--SFYICSA 96 (246)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 3444444
No 196
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=95.40 E-value=0.025 Score=43.53 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=43.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEe-EEcc--CCe--eeecC-----cCCCceEEEc---cCcc--EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVT-SWIQ--DDV--NIYLN-----TDTGGKYVVL---SSGD--LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~-SW~~--Dd~--~I~p~-----~~~dgKY~vl---psGe--L~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-...+..| +|.+ ++. .+..+ ...++|+.+. .+|. |.|.+++.+|.
T Consensus 342 ~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~ 418 (585)
T 2ocw_A 342 KGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDA 418 (585)
T ss_pred EEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhC
Confidence 4678999999999976655555544 8998 664 44332 2246788887 4576 99999887764
No 197
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=95.39 E-value=0.007 Score=41.90 Aligned_cols=61 Identities=15% Similarity=0.232 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---e---eecC-------cCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---N---IYLN-------TDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~---I~p~-------~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.++.|.|.+..+-.+ .....|.+++ . . ++.. ....+||.+..++. |.|++++.+
T Consensus 145 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 223 (256)
T 3ux9_B 145 LVQPGGSLRLSCAASGFTFS-SYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 223 (256)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCeEEEEEEEeCCccc-ccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChh
Confidence 56789999999998644322 2356888752 1 1 1111 12346999876554 999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 224 Ds 225 (256)
T 3ux9_B 224 DT 225 (256)
T ss_dssp GC
T ss_pred hC
Confidence 75
No 198
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=95.39 E-value=0.034 Score=35.11 Aligned_cols=67 Identities=22% Similarity=0.284 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCcC-------C-CceEEEccCc--cEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNTD-------T-GGKYVVLSSG--DLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~~-------~-dgKY~vlpsG--eL~Ir~v~~~~~n~ 81 (98)
.|..|.+|.|.|.+.+.-. ....|.+.. ..| +-... . ++||.+..++ -|.|++++.+|.
T Consensus 12 ~v~~G~~vtL~C~~~~~~~---~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~L~I~~~~~~Ds-- 86 (112)
T 1fo0_B 12 LVPRGQAVNLRCILKNSQY---PWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG-- 86 (112)
T ss_dssp ECCTTCCEEEEEEESCTTC---CEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEEEEEEESCCSC--
T ss_pred EEecCCcEEEEEEeCCCCC---ceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCCeEEEcCCCHhHC--
Confidence 3458999999999754422 236898743 122 22111 1 2888886322 699999998764
Q ss_pred ceeeeeeh
Q psy5692 82 SVKKMKVE 89 (98)
Q Consensus 82 ~~~~~~~~ 89 (98)
+.=-|.+.
T Consensus 87 g~Y~C~~~ 94 (112)
T 1fo0_B 87 RTLYCTCS 94 (112)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 45555543
No 199
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=95.39 E-value=0.0097 Score=38.42 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=44.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc-CccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS-SGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp-sGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+..+-.. ..+|.+++..|.+ +++|.+.. ++.|.|.+++.+|. ..-.|.+.
T Consensus 109 ~~~~g~~v~l~C~~~g~p~~---~v~W~~~g~~~~~----~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a~ 172 (189)
T 2v5t_A 109 TAERGEEMTFSCRASGSPEP---AISWFRNGKLIEE----NEKYILKGSNTELTVRNIINSDG--GPYVCRAT 172 (189)
T ss_dssp ETTSCCCEEEECEEEEESCC---EEEEEETTEECCC----SSSEEEETTTTEEEECSCCGGGC--EEEEEEEE
T ss_pred cccCCCcEEEEEEEccCCCC---eEEEEECCEECcC----CCcEEEecCCCEEEEcCCChhhC--eeEEEEEE
Confidence 45679999999998543222 3689999876643 46777764 67899999888773 34556543
No 200
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=95.37 E-value=0.0022 Score=44.46 Aligned_cols=64 Identities=11% Similarity=0.062 Sum_probs=44.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.+.. ...-...+|.+++ ..+ + .+.+|.+.++|.|.|++++.+|.- .-.|.+.
T Consensus 100 ~v~~g~~v~l~C~~~~--~~~~~~v~W~~~~~~~~-~---~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~a~ 164 (292)
T 4dkd_C 100 VVFEDQDALLPCLLTD--PVLEAGVSLVRVRGRPL-M---RHTNYSFSPWHGFTIHRAKFIQSQ--DYQCSAL 164 (292)
T ss_dssp EEETTSCEECCEEESS--GGGGSSEEEEEGGGCCC-C---SSCCEECCSSSCCEETTCCGGGCS--EEEEEEC
T ss_pred EEcCCCcEEEeeeCCC--CCcceeEEEEecCCCcc-c---cCCcccccCCceEEECCCCHHHCe--EEEEEEE
Confidence 5778999999999864 1221356798886 443 3 367888889999999998877643 3444443
No 201
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=95.36 E-value=0.006 Score=40.81 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=39.5
Q ss_pred ceeecCeEEEEccCCCCcc-ceeEEeEEccCC--ee----eec----CcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS-EYIIVTSWIQDD--VN----IYL----NTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~-d~V~V~SW~~Dd--~~----I~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...-. +-. ..+|.+++ .. +|. .....+||.+..+| .|.|++++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 85 (212)
T 1q0x_L 11 TTSPGETVTLTCRSSTGAVTTSN-YANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDE 85 (212)
T ss_dssp EECTTCCEEEEEEESSSCCCGGG-CCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eecCCCCEEEEEEecccccCCCC-eEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCC
Confidence 4668999999999754321 011 37898863 11 111 11235799887644 799999998875
No 202
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=95.34 E-value=0.0076 Score=43.57 Aligned_cols=66 Identities=17% Similarity=0.126 Sum_probs=44.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|..|.++.|.|.+... .-.....|.+++..|.++. ........+|.|.|.+++..|.- .-.|.+.
T Consensus 17 ~v~~G~~v~l~C~~~~~--~p~~~v~W~k~g~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G--~Y~C~a~ 82 (395)
T 1bih_A 17 LFRENNPTVLECIIEGN--DQGVKYSWKKDGKSYNWQE--HNAALRKDEGSLVFLRPQASDEG--HYQCFAE 82 (395)
T ss_dssp EEETTSCEEECCCEESC--CSSCEEEEEESSSBCCTTT--TTEEECTTSCCEEESSCCGGGCE--EEEEEEE
T ss_pred EEeCCCEEEEEEEEecC--CCCceEEEEECCcCccccc--ceEEEecCCceEEEecCCCCCCc--EEEEEEE
Confidence 55689999999998651 1234568999997665432 13334457899999998777653 4555543
No 203
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=95.31 E-value=0.014 Score=44.92 Aligned_cols=69 Identities=13% Similarity=0.213 Sum_probs=45.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe-----eeecC-----cCCCceEEEcc---Cc--cEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV-----NIYLN-----TDTGGKYVVLS---SG--DLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~-----~I~p~-----~~~dgKY~vlp---sG--eL~Ir~v~~~~~n~~ 82 (98)
.|..|.++.|.|.++..-..-.....|.+++. .|.++ .+.+||+.+.. +| .|.|.+++.+|. .
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~--G 88 (585)
T 2ocw_A 11 NSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDS--G 88 (585)
T ss_pred EEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccC--E
Confidence 56789999999998765432233578999973 23221 22467888863 44 499999988775 3
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
.-.|.+
T Consensus 89 ~Y~C~~ 94 (585)
T 2ocw_A 89 RYKCGL 94 (585)
T ss_pred EEEEEc
Confidence 455554
No 204
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=95.30 E-value=0.0058 Score=42.52 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=38.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG--eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...- . .....|++|+..|.+ +++|.. .+| .|.|++++.+|.
T Consensus 127 ~v~~g~~v~l~C~v~g~~-P-~p~i~W~k~g~~l~~----~~~~~~-~~~~~~L~I~~v~~~D~ 183 (207)
T 3rbs_A 127 EVTGECNVLLKCKVANIK-K-ETHIVWYKDEREISV----DEKHDF-KDGICTLLITEFSKKDA 183 (207)
T ss_dssp EEETTTEEEEEEEEESCC-T-TCEEEEEETTEEECC----CCCCCC-SSEEEEEEETTCCGGGC
T ss_pred EEcCCCcEEEEEEEeCCC-C-CCEEEEEECCEECCC----CCceEc-CCCEEEEEECCCCcccC
Confidence 677999999999964320 0 224689999988765 345533 333 599999988774
No 205
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=95.30 E-value=0.013 Score=42.43 Aligned_cols=58 Identities=16% Similarity=0.406 Sum_probs=40.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc-cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-psGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.++..-.. ....|.+++..+.. ..++++.+. .+|.|.|.+++..|.
T Consensus 112 ~v~~G~~v~l~C~~~~~~p~--~~i~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~ 170 (382)
T 1cs6_A 112 KITEGWGVMFTCSPPPHYPA--LSYRWLLNEFPNFI--PADGRRFVSQTTGNLYIAKTEASDL 170 (382)
T ss_dssp EEETTSCEEECCCCCSEESC--CEEEEEESSTTCBC--CCCSSEEECTTTCCEEESSCCGGGC
T ss_pred EEecCCcEEEEeCCCCCCCC--cEEEEEECCCcccc--ccCceEEEecCceEEEEEeeCcccC
Confidence 46789999999996543222 34689999844321 135666554 579999999887764
No 206
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=95.29 E-value=0.0049 Score=41.31 Aligned_cols=55 Identities=9% Similarity=-0.064 Sum_probs=33.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|..+... ....|.+++..+... ..+......+|.|.|++++..|
T Consensus 14 ~v~~G~~v~L~C~~~~~~----~~~~w~k~g~~~~~~--~~~~~~~~~~~~L~I~~v~~~D 68 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYGA----VEYQLHFEGSLFAVD--RPKPPERINKVKFYIPDMNSRM 68 (188)
T ss_dssp EEETTCCEEEEEECCTTC----CEEEEEETTEEEEEE--CCSSCTTCCEEEEEESSCCGGG
T ss_pred cCCCCCCEEEEEecCCCC----CEEEEEECCCccccc--ccccCCCcceeEEEeCcCCccc
Confidence 578999999999986432 356899998554321 0111112245566666665544
No 207
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=95.29 E-value=0.004 Score=41.73 Aligned_cols=55 Identities=11% Similarity=0.074 Sum_probs=33.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|.+..... ...|.+++..+.+... .......+|.|.|++++..|
T Consensus 15 ~v~~G~~v~L~C~~~~~~~----~~~W~k~g~~~~~~~~--~~~~~~~~~~L~i~~v~~~D 69 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ----EYRLVKEGSPEPWDTQ--NPLEPKNKARFSIPSMTEHH 69 (196)
T ss_dssp EEETTCCEEEEEECCTTCC----EEEEEETTCSSCSEEE--CCCSSTTEEEEEESSCCGGG
T ss_pred cccCCCeEEEEEeCCCCCc----EEEEEECCCCCCcccc--cccCCccccEEEeccCChhH
Confidence 6779999999999865432 6789999854432100 00111245667776666554
No 208
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=95.28 E-value=0.013 Score=39.03 Aligned_cols=59 Identities=17% Similarity=0.270 Sum_probs=37.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C--eee-ecC----cCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D--VNI-YLN----TDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d--~~I-~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...- .....|.+. . ..+ +-. ....+||.+.. ++.|.|++++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (213)
T 3mj8_L 11 SVALGQKATITCSGDKLS---DVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDE 82 (213)
T ss_dssp EEETTSCEEEEEECSSTT---TSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEEEcCCCC---CceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhC
Confidence 456899999999986322 235678772 2 222 211 11457888653 45699999988875
No 209
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=95.24 E-value=0.013 Score=37.09 Aligned_cols=77 Identities=21% Similarity=0.215 Sum_probs=45.8
Q ss_pred cceeeeceEEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc--------CCCceEEEccC-
Q psy5692 2 LPVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT--------DTGGKYVVLSS- 66 (98)
Q Consensus 2 rAVV~Q~Yev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~--------~~dgKY~vlps- 66 (98)
-++|.|+=. + .|..|.++.|.|.+.+.... ....|.+.. ..++-.. ...+||.+..+
T Consensus 2 ~~~v~qp~~--~----~~~~G~~v~L~C~~~~~~~~--~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~ 73 (115)
T 2otu_A 2 QLVLTQSSS--A----SFSLGASAKLTCTLSSQHST--YTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSG 73 (115)
T ss_dssp CCCEEECCC--E----ECCTTCCEEEEEEECGGGTT--CCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEET
T ss_pred CCeEEcCCC--E----EECCCCCEEEEEEecCCCCC--eEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccC
Confidence 455666421 2 45589999999997643212 236787632 2233111 12578988653
Q ss_pred --ccEEEEeEeeecCCcceeeeee
Q psy5692 67 --GDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 67 --GeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.-|.|++++.+|. +.=-|.+
T Consensus 74 ~~~~L~I~~~~~~Ds--g~Y~C~~ 95 (115)
T 2otu_A 74 ADRYLSISNIQPEDE--AIYICGV 95 (115)
T ss_dssp TEEEEEESSCCGGGC--EEEEEEE
T ss_pred CEEEEEECCCChhHC--EEEEEEE
Confidence 3599999988774 4444544
No 210
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=94.24 E-value=0.0032 Score=39.70 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe------eeecC----cCCCceEEEcc-----CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV------NIYLN----TDTGGKYVVLS-----SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~------~I~p~----~~~dgKY~vlp-----sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|+|.|.+...- -....|.+.+. .++-. ...+|||.+.. ++.|.|++++.+|. +
T Consensus 10 ~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds--G 84 (110)
T 1u3h_A 10 TVWEGETAILNCSYENSA---FDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS--A 84 (110)
Confidence 466899999999986432 23578988641 12211 12468998864 35799999998874 3
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
.=.|.+.
T Consensus 85 ~Y~C~~~ 91 (110)
T 1u3h_A 85 TYFCAAS 91 (110)
Confidence 4445443
No 211
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=95.23 E-value=0.0076 Score=40.54 Aligned_cols=68 Identities=18% Similarity=0.097 Sum_probs=42.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---cEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+.+.-.. ....+|.+++ . .+|.. ....+||.+..+| .|.|++++.+|. ..-
T Consensus 11 ~v~~G~~v~L~C~v~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~Y 87 (216)
T 2xzc_L 11 SAAPGQKVTISCSGSSSNIG-NNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDE--ADY 87 (216)
T ss_dssp EECTTCCEEEEEECCTTTGG-GSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC--EEE
T ss_pred EecCCCeEEEEEEeecCCCC-CCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccC--EEE
Confidence 45689999999995322211 1247898743 1 12211 1235799887655 799999998875 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 88 ~C~~ 91 (216)
T 2xzc_L 88 YCGT 91 (216)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 212
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=95.22 E-value=0.0065 Score=42.68 Aligned_cols=58 Identities=17% Similarity=0.134 Sum_probs=37.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeecCcC---------CCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYLNTD---------TGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p~~~---------~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+.. .. ....|++.. ..+....+ .++||.+.. ++.|.|++++.+|.
T Consensus 38 ~v~~G~~v~L~C~~~~---~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 113 (270)
T 3qib_D 38 VKGQGQKAKMRCIPEK---GH-PVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDS 113 (270)
T ss_dssp EEETTSCEEEEEECCT---TC-CEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGC
T ss_pred EEcCCCCEEEEEEecC---CC-ceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHC
Confidence 5678999999999743 22 357898722 11211110 012888864 55799999998874
No 213
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=95.22 E-value=0.0055 Score=42.38 Aligned_cols=65 Identities=15% Similarity=0.327 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeee-cC--cCCCceEEEccC------ccEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIY-LN--TDTGGKYVVLSS------GDLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~-p~--~~~dgKY~vlps------GeL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|+|.|.+.... . ...|++.. ..|+ .. ....+||.+..+ +.|.|++++.+|. ..
T Consensus 12 ~v~~G~~v~L~C~~~~~~-~---~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~--G~ 85 (207)
T 1ypz_E 12 SLHEGTDSALRCNFTTTM-R---SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS--GT 85 (207)
T ss_dssp EEETTCCEEEEEEESSCC-S---EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC--EE
T ss_pred EEccCCcEEEEEEEeCCC-e---EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC--EE
Confidence 456899999999986543 2 48998743 2221 10 113589998754 5799999998874 44
Q ss_pred eeeee
Q psy5692 84 KKMKV 88 (98)
Q Consensus 84 ~~~~~ 88 (98)
--|.+
T Consensus 86 Y~C~~ 90 (207)
T 1ypz_E 86 YFCAA 90 (207)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 214
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=95.19 E-value=0.016 Score=36.19 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCCCCcc--ceeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---cEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMS--EYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~--d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~ 82 (98)
.|..|.+++|.|.+..... + -....|.+.. . .++.. ....+||.+.+++ .|.|++++.+|. +
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds--G 88 (111)
T 1j05_L 12 AVSLGQRATMSCRAGESVDIFG-VGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV--A 88 (111)
T ss_dssp ECCTTSCEEEEEEESSCCEETT-EECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC--E
T ss_pred EEeCCCCEEEEeecCCCcccCC-CceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccC--E
Confidence 4558999999999865441 1 2347898753 1 23321 1235799987543 699999998774 3
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
.=-|.+
T Consensus 89 ~Y~C~~ 94 (111)
T 1j05_L 89 TYYCQQ 94 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444444
No 215
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=95.18 E-value=0.0094 Score=41.24 Aligned_cols=68 Identities=12% Similarity=0.160 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.+..+-... ....|++.. ..| +-. ....+||.+..++. |.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (230)
T 3n9g_H 11 VRKPGASTKVSCKASGYTFTH-YYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSE 89 (230)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEeecceecC-cEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChh
Confidence 466899999999986432222 346787632 122 111 12358999986655 999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..--|.+
T Consensus 90 Ds--G~Y~C~~ 98 (230)
T 3n9g_H 90 DT--AVYYCAR 98 (230)
T ss_dssp GC--EEEEEEE
T ss_pred hC--EEEEEEE
Confidence 74 4444444
No 216
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=95.16 E-value=0.0041 Score=41.70 Aligned_cols=55 Identities=9% Similarity=-0.098 Sum_probs=28.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...- ....|.+++..+.+. ......++ .+.|.|++++.+|+
T Consensus 110 ~v~~G~~v~L~C~~~~~p----~~~~W~k~g~~~~~~---~~~~~~~~~~~~~~~L~I~~v~~~D~ 168 (196)
T 2d3v_A 110 VVTSGENVTLQCGSRLRF----DRFILTEEGDHKLSW---TLDSQLTPSGQFQALFPVGPVTPSHR 168 (196)
T ss_dssp -------CEEEEEESSCC----SEEEEEEC---CCEE---EEECEECTTSCEEEEEECCCCBTTBC
T ss_pred cccCCCcEEEEEEcCCCC----CEEEEEccCCccccc---ccccccccCCCceeEEEeeecCcccC
Confidence 578999999999986543 357899998665431 01112333 26888888887764
No 217
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=95.13 E-value=0.039 Score=35.58 Aligned_cols=69 Identities=12% Similarity=0.073 Sum_probs=45.3
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCC--eeeecC-cCCCceEEEcc---CccEEEEeEeeecCCcceeeee
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--VNIYLN-TDTGGKYVVLS---SGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~~I~p~-~~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
... .+..|.++.|.|.+..+-. ....|.+++ ..+... ...+++|.+.. ++.|.|.+++.+|. ..-.|.
T Consensus 102 ~~~-~~~~g~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~ 175 (192)
T 2va4_A 102 KNE-TTYENGQVTLVCDAEGEPI---PEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDS--GRYDCE 175 (192)
T ss_dssp CCE-EECTTSEEEEEEEEEEESC---CEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGC--EEEEEE
T ss_pred Ccc-eEEeCCeEEEEEEecCCCC---CcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccC--EEEEEE
Confidence 344 6678999999999754322 237899984 544332 23467888765 46799999888763 345555
Q ss_pred e
Q psy5692 88 V 88 (98)
Q Consensus 88 ~ 88 (98)
+
T Consensus 176 a 176 (192)
T 2va4_A 176 A 176 (192)
T ss_dssp E
T ss_pred E
Confidence 4
No 218
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=95.13 E-value=0.0036 Score=42.27 Aligned_cols=56 Identities=11% Similarity=-0.072 Sum_probs=34.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEE-ccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV-LSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~v-lpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|..+. . .....|.+++..+.+.. ...++.. ..+|.|.|.+++..|
T Consensus 18 ~v~~G~~v~L~C~~~~---~-~~~~~w~k~g~~~~~~~-~~~~~~~~~~~~~l~I~~v~~~D 74 (201)
T 1nkr_A 18 LVKSEETVILQCWSDV---M-FEHFLLHREGMFNDTLR-LIGEHHDGVSKANFSISRMTQDL 74 (201)
T ss_dssp EEETTCCEEEEEEESS---C-CSEEEEEEESSSCEEEE-EECEEETTEEEEEEEESSCCGGG
T ss_pred ccCCCCcEEEEEeccC---C-CCEEEEEECCCcCCcce-eeeecCCCCceEEEEeccCCccc
Confidence 5779999999999753 1 23578999885443311 0111111 245778887777665
No 219
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=95.13 E-value=0.0066 Score=36.62 Aligned_cols=60 Identities=12% Similarity=0.026 Sum_probs=39.4
Q ss_pred ceeecCeEEEEccCCC-CccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPS-YMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs-~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+.+ .- .....|.+++....+ + .....+|.|.|++++.+|. ..-.|..
T Consensus 21 ~v~~G~~v~l~C~~~~~~p---~~~v~W~k~~~~~~~----~--~~~~~~~~L~i~~v~~~D~--G~Y~C~a 81 (98)
T 1gl4_B 21 SVRPGADVTFICTAKSKSP---AYTLVWTRLHNGKLP----S--RAMDFNGILTIRNVQPSDA--GTYVCTG 81 (98)
T ss_dssp EECTTCCEEEEEEEEESSS---CCEEEEEEGGGBCCC----T--TEEEETTEEEECSCCGGGC--EEEEEEE
T ss_pred EEecCCCEEEEEeCCCCCC---CcEEEEEeCCCCCCC----c--eeecCCCEEEEeCCChhhC--EEEEEEe
Confidence 5679999999999752 22 235689988633323 1 2344688999999988773 3444443
No 220
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=95.12 E-value=0.0097 Score=43.30 Aligned_cols=66 Identities=14% Similarity=0.029 Sum_probs=43.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCee-eec---------CcCCCceEEEcc------CccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVN-IYL---------NTDTGGKYVVLS------SGDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~-I~p---------~~~~dgKY~vlp------sGeL~Ir~v~~~~~n~ 81 (98)
.|..|.++.|.|.++.. -.....|.+++.. +.. .....+|+.+.. ++.|.|++++.+|.
T Consensus 5 ~~~~G~~v~L~C~~~~~---p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~-- 79 (363)
T 1wio_A 5 LGKKGDTVELTCTASQK---KSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS-- 79 (363)
T ss_dssp EEETTSCEEECCCCTTC---SSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGC--
T ss_pred EEeCCCeEEEEEEecCC---CceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHC--
Confidence 46689999999997532 2334689999832 311 123467888764 66799999988774
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
..-.|.+
T Consensus 80 G~Y~C~~ 86 (363)
T 1wio_A 80 DTYICEV 86 (363)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3445544
No 221
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=95.11 E-value=0.015 Score=34.78 Aligned_cols=32 Identities=19% Similarity=0.432 Sum_probs=23.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIY 52 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~ 52 (98)
.+..|.++.|.|.+..+-.. ...|.+++..+.
T Consensus 14 ~v~~G~~~~l~C~~~g~p~p---~i~W~~~~~~~~ 45 (91)
T 3bfo_A 14 KLMPGSTLVLQCVAVGSPIP---HYQWFKNELPLT 45 (91)
T ss_dssp EECTTSCEEEECEEECSSCC---EEEEEETTEECT
T ss_pred EecCCCcEEEEEEeccCCCC---EEEEEcCCeeCC
Confidence 57789999999997543332 568999986653
No 222
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=95.10 E-value=0.0045 Score=38.70 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=35.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--cCCCce-EE----EccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--TDTGGK-YV----VLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--~~~dgK-Y~----vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-...+ -.+|.+++..+... ...+.. +. ...++.|.|.+++.+|.
T Consensus 19 ~v~~G~~v~L~C~~~g~p~~~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Ds 86 (122)
T 3s35_X 19 ELSVGEKLVLNCTARTELNVGI-DFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQ 86 (122)
T ss_dssp EEEETCCEEEEEEEEECTTCCC-EEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGC
T ss_pred EEecCCeEEEEEEEEcCCCCcE-EEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccC
Confidence 4678999999999753222222 34899987433210 011111 11 12456799999888774
No 223
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=95.09 E-value=0.0037 Score=44.44 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=0.0
Q ss_pred EeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 13 VNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 13 V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
-.+. .|..|.++.|.|.+...- -.....|.+++..|.+ ++||.+ .+|.|.|.+++.+|.- .-.|.+
T Consensus 15 ~~~~-~v~~G~~v~l~C~~~~~~--p~~~v~W~k~g~~~~~----~~~~~~-~~~~L~i~~v~~~D~G--~Y~C~a 80 (334)
T 1ry7_B 15 QEQL-VFGSGDAVELSCPPPGGG--PMGPTVWVKDGTGLVP----SERVLV-GPQRLQVLNASHEDSG--AYSCRQ 80 (334)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred cCcE-EEecCCcEEEEeeCCCCC--CCcceEEEECCeeCCC----cccEEe-ccceEEEeecccccCE--EEEEEE
Confidence 3344 678999999999986331 1236789999876644 466665 6889999999888752 344544
No 224
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=95.06 E-value=0.007 Score=41.93 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee---ecC-------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI---YLN-------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I---~p~-------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-.+ .....|++++ ..| ++. ....+||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (227)
T 1mju_H 11 LVKPGASVKLSCKASGYTFT-NYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSD 89 (227)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEecCCccc-cceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcc
Confidence 45689999999998544212 2356898753 111 110 11358999874 468999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 90 D~--G~Y~C~~ 98 (227)
T 1mju_H 90 DS--AVYYCAN 98 (227)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 75 3344443
No 225
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=95.06 E-value=0.013 Score=39.41 Aligned_cols=68 Identities=13% Similarity=0.014 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC---e---eeecCc--------CCCceEEEccC-----ccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD---V---NIYLNT--------DTGGKYVVLSS-----GDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd---~---~I~p~~--------~~dgKY~vlps-----GeL~Ir~v~~~~ 78 (98)
.|..|.+|.|.|.+...-... ....|++++ . .++... ...+||.+..+ +.|.|++++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 11 LVKPSQTLSLTCSVTGDSITS-DYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 89 (210)
T ss_dssp EECTTSCEEEEEEEESSCGGG-SCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEecccCCC-CcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCccc
Confidence 467899999999986442111 346898752 1 122111 13589988752 289999999887
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ..-.|.+
T Consensus 90 ~--G~Y~C~~ 97 (210)
T 3d9a_H 90 T--ATYYCAN 97 (210)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 5 3344443
No 226
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=95.06 E-value=0.033 Score=34.95 Aligned_cols=66 Identities=11% Similarity=0.131 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCC-CCccceeEEeEEccCC-----e-eee--cCc-------CC-CceEEEccCc---cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIP-SYMSEYIIVTSWIQDD-----V-NIY--LNT-------DT-GGKYVVLSSG---DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IP-s~V~d~V~V~SW~~Dd-----~-~I~--p~~-------~~-dgKY~vlpsG---eL~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+. .+-. ....|.+.. . .++ ... .. .+||.+..++ -|.|++++.+
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~---~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~ 86 (111)
T 2qhl_A 10 TVKRGENVTMECSMSKVKDK---DKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTRED 86 (111)
T ss_dssp ECCTTCCEEECCBCTTCSCG---GGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCCGG
T ss_pred EEeCCCCEEEEEEccCCccc---ceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCChh
Confidence 355899999999986 4432 236887742 1 221 111 12 6899887543 5999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.=-|.+
T Consensus 87 Ds--G~Y~C~~ 95 (111)
T 2qhl_A 87 DG--GEYFCGE 95 (111)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 74 4444444
No 227
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=95.05 E-value=0.024 Score=35.34 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=42.3
Q ss_pred ceeecCeEEEEcc-CCCCccceeEEeEEccCC----eeeecCc----CCCceEEEc--cC---ccEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQ-IPSYMSEYIIVTSWIQDD----VNIYLNT----DTGGKYVVL--SS---GDLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~-IPs~V~d~V~V~SW~~Dd----~~I~p~~----~~dgKY~vl--ps---GeL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|.|.|. +...... ....|.+.. ..||... ...+||.+. ++ ..|.|++++.+|. ..
T Consensus 11 ~v~~G~~v~L~C~v~~~~~~~--~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds--G~ 86 (109)
T 1pew_A 11 SESPGKTVTISCTRSSGNIAS--NYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDE--AD 86 (109)
T ss_dssp EECTTSCEEEEEEESSSCGGG--SCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGC--EE
T ss_pred EEcCCCCEEEEEEeCCCCCCC--ccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhC--EE
Confidence 4558999999999 7544322 347898765 2233211 135899886 43 3699999998774 44
Q ss_pred eeeee
Q psy5692 84 KKMKV 88 (98)
Q Consensus 84 ~~~~~ 88 (98)
=-|.+
T Consensus 87 Y~C~~ 91 (109)
T 1pew_A 87 YYCQS 91 (109)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44544
No 228
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=95.03 E-value=0.011 Score=39.74 Aligned_cols=59 Identities=10% Similarity=0.192 Sum_probs=40.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC----cCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN----TDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+.... .....|.+++ ..+ +.. ...++||.+.+ ++.|.|++++.+|.
T Consensus 35 ~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 106 (237)
T 3sob_L 35 SASVGDRVTITCRASQDV---STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDF 106 (237)
T ss_dssp EEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCcEEEEEecCCCC---CceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhC
Confidence 677899999999987552 3456787732 222 211 12367998874 45699999998875
No 229
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=95.02 E-value=0.0065 Score=39.75 Aligned_cols=66 Identities=11% Similarity=0.128 Sum_probs=44.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeee--------cCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIY--------LNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~--------p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.++..- .....|.+++..+. ......+|+.+.. +.|.|++++..|.- .-.|.+.
T Consensus 15 ~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~~~~~d~G--~Y~C~~~ 88 (209)
T 1nbq_A 15 RIPENNPVKLSCAYSGFS---SPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-TGITFKSVTREDTG--TYTCMVS 88 (209)
T ss_dssp CEETTCCCEEECEEESCS---SEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-TEEECSCCCTTSCS--EEEEEEE
T ss_pred EEEcCCCEEEEEEEeCCC---CcEEEEEEcCCceeEEEEecCccCccccCceEeec-cEEEEeeCCHHHCc--EEEEEEe
Confidence 467899999999987542 23468999873321 0123457777765 89999998887653 4556554
No 230
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=95.00 E-value=0.014 Score=41.36 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccC--CCCccceeEEeEEccCCe----eee-c----CcCCCceEEEc--------cCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQI--PSYMSEYIIVTSWIQDDV----NIY-L----NTDTGGKYVVL--------SSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~I--Ps~V~d~V~V~SW~~Dd~----~I~-p----~~~~dgKY~vl--------psGeL~Ir~v~~~~ 78 (98)
.++.|.+++|.|.+ |+.-...+...+|.+++. .++ + ....++|+.+. .++.|.|++++.+|
T Consensus 11 ~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 90 (313)
T 4fqp_A 11 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVED 90 (313)
T ss_dssp CCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGG
T ss_pred EEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhh
Confidence 45689999999987 333334455578998862 111 1 11234566553 24679999999887
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ..-.|.+
T Consensus 91 ~--G~Y~C~v 98 (313)
T 4fqp_A 91 E--GNYTCLF 98 (313)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 3445544
No 231
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=95.00 E-value=0.025 Score=37.71 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=36.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C--e-eeecCc----CCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D--V-NIYLNT----DTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d--~-~I~p~~----~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+. -.....|.++ . . .++... ...+||.+.. ++.|.|++++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~-----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 80 (211)
T 3tv3_L 11 SGSPGQSITISCTGT-----SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE 80 (211)
T ss_dssp EECTTCEEEEEEECC-----CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEcCCCCEEEEEEEC-----CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC
Confidence 456899999999976 1234678873 2 1 222111 1357888653 45699999998874
No 232
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=94.99 E-value=0.012 Score=44.11 Aligned_cols=61 Identities=15% Similarity=0.234 Sum_probs=40.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e----eeecC---------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V----NIYLN---------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~----~I~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.++.+.... ....|++++ . .++-. ....+||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (444)
T 1igt_B 11 LVQPGGSLKLSCATSGFTFSD-YYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSE 89 (444)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEcCCCccCC-ceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHH
Confidence 567999999999986543211 246898753 1 11211 11357999875 458999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 90 D~ 91 (444)
T 1igt_B 90 DT 91 (444)
T ss_dssp GC
T ss_pred HC
Confidence 75
No 233
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=94.98 E-value=0.024 Score=40.21 Aligned_cols=59 Identities=15% Similarity=0.290 Sum_probs=40.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...-. ....|.+++ ..+ +.. ...++||.+.++| .|.|++++.+|.
T Consensus 23 ~v~~G~~v~L~C~~~~~p~---~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 94 (276)
T 3auv_A 23 SASVGDRVTITCRASQDVS---TAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDF 94 (276)
T ss_dssp ECCTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEcCCCCEEEEeEcCCCCC---CcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhC
Confidence 4779999999999864432 246788753 122 211 1246899998765 799999998774
No 234
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=94.97 E-value=0.016 Score=37.82 Aligned_cols=66 Identities=20% Similarity=0.342 Sum_probs=44.3
Q ss_pred ceeecCeEEEEccC-CCCccceeEEeEEccCCeeeecCcC-----CCceEEEc-cCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQI-PSYMSEYIIVTSWIQDDVNIYLNTD-----TGGKYVVL-SSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~I-Ps~V~d~V~V~SW~~Dd~~I~p~~~-----~dgKY~vl-psGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+ ..+-.. ..+|.+++..|..... .+++|.+. .++.|.|++++.+|.- .-.|.+
T Consensus 118 ~~~~g~~~~l~C~~~~~~p~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~a 190 (209)
T 1nbq_A 118 SATIGNRAVLTCSEQDGSPPS---EYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTG--EYSCEA 190 (209)
T ss_dssp EEETTSCEEECCCCCSCBSCC---EEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCC--CEEEEE
T ss_pred ceecCCEEEEEEeCCCCCCCc---eeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCe--EEEEEE
Confidence 46789999999996 333222 6789999866643221 13567665 5789999998887753 445544
No 235
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=94.95 E-value=0.021 Score=40.62 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=39.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC---------cCCCceEEEcc----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVLS----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vlp----sGeL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+... -.....|++++ . .++.. ....+||.+.. ++.|.|++++.+|
T Consensus 35 ~v~~G~~v~L~C~~~~~---~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D 111 (279)
T 2wbj_D 35 ISKSGTSVKIECRSLDF---QATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPED 111 (279)
T ss_dssp EEETTSCEEEEEEESSS---CEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGG
T ss_pred EecCCCeEEEEEEeCCC---CCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccC
Confidence 57799999999998533 23557898763 1 11111 12368999874 3479999998877
Q ss_pred C
Q psy5692 79 G 79 (98)
Q Consensus 79 ~ 79 (98)
.
T Consensus 112 ~ 112 (279)
T 2wbj_D 112 S 112 (279)
T ss_dssp C
T ss_pred C
Confidence 4
No 236
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=94.94 E-value=0.025 Score=39.29 Aligned_cols=68 Identities=18% Similarity=0.212 Sum_probs=42.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ec---------CcCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YL---------NTDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p---------~~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.++.+-.. .....|++.. ..| +. .....+||.+..++. |.|++++.+
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (256)
T 3umt_A 13 LVKPGASVKISCKTSGYTFT-EYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE 91 (256)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEEeccccc-ccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc
Confidence 45689999999997643211 1245787532 111 11 112368999987555 999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 92 Ds--G~Y~C~~ 100 (256)
T 3umt_A 92 DS--AVYYCAR 100 (256)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 73 3444444
No 237
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=94.90 E-value=0.014 Score=39.33 Aligned_cols=50 Identities=14% Similarity=0.057 Sum_probs=33.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc----CccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS----SGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp----sGeL~Ir~v~ 75 (98)
.|..|.+++|.|..... .. ...|.+|+..+.+. ..+...+ ++.|.|.+|+
T Consensus 118 ~v~~G~~v~L~C~~~~~---~~-~~~w~k~g~~~~~~----~~~~~~~~~~~~~~L~i~~v~ 171 (201)
T 1nkr_A 118 TVLAGENVTLSCSSRSS---YD-MYHLSREGEAHERR----LPAGPKVNGTFQADFPLGPAT 171 (201)
T ss_dssp EECTTCEEEEEEEESSC---CS-EEEEEETTCSSCEE----EECEEEETTEEEEEEEEEECC
T ss_pred ccCCCCeEEEEEeCCCC---Cc-eEEEEECCcccCcc----cccccccCCceEEEEEeCCcC
Confidence 57899999999997532 22 35699998555331 1222222 6789999987
No 238
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=94.90 E-value=0.017 Score=39.67 Aligned_cols=68 Identities=18% Similarity=0.208 Sum_probs=43.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC--C---eee---ec-------CcCCCceEEEccCc-----cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD--D---VNI---YL-------NTDTGGKYVVLSSG-----DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D--d---~~I---~p-------~~~~dgKY~vlpsG-----eL~Ir~v~~~ 77 (98)
.+..|.++.|.|.+..+-... ....|.++ + ..+ ++ .....+||.+..++ .|.|++++.+
T Consensus 142 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 220 (250)
T 3esu_F 142 LVKPGASVKISCKDSGYAFSS-SWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSV 220 (250)
T ss_dssp EECTTCCEEEEEECCSTTGGG-SEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCceEEEEEEecCCcccC-CEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcc
Confidence 567899999999986543222 34679876 2 111 10 11234899998665 5999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 221 Ds--G~Y~C~~ 229 (250)
T 3esu_F 221 DS--AVYFCAR 229 (250)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 74 3444443
No 239
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=94.88 E-value=0.013 Score=40.37 Aligned_cols=68 Identities=12% Similarity=0.161 Sum_probs=43.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-... ....|++++ ..| +-. ....+||.+..+ +.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 11 VVQPGKSLRLSCAASGFTFSG-YGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEecCcccCC-ceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 567999999999986432211 346898753 122 211 124589998752 47999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 90 D~--G~Y~C~~ 98 (223)
T 1dee_B 90 DT--AVYYCAK 98 (223)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 75 4444444
No 240
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=94.87 E-value=0.016 Score=41.85 Aligned_cols=61 Identities=13% Similarity=0.192 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ...+|.+++..|.+ +.|+.+ .+|.|.|.+++.+|. ..-.|..
T Consensus 305 ~~~~g~~~~l~C~~~g~p~---p~v~W~~~g~~~~~----~~~~~~-~~~~L~i~~v~~~d~--G~Y~C~a 365 (382)
T 1cs6_A 305 EADIGSDLRWSCVASGKPR---PAVRWLRDGQPLAS----QNRIEV-SGGELRFSKLVLEDS--GMYQCVA 365 (382)
T ss_dssp EEETTCCEEEECEEEEESC---CEEEEEETTEECCC----CSSEEE-ETTEEEESSCCGGGC--EEEEEEE
T ss_pred EEcCCCeEEEEEEeeeecC---CEEEEEECCEECCC----CceEEE-ECCEEEECcCCcccC--EEEEEEE
Confidence 5678999999999743322 23689999977644 467766 578999999987774 3455554
No 241
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=94.87 E-value=0.0077 Score=44.84 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=37.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.++.+-...-...+|.+|+..|.+.. .+....+|.|.|++++..|
T Consensus 97 ~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~----~~~~~~~~~L~i~~~~~~d 153 (450)
T 1z7z_I 97 WQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP----AVGEPAEVTTTVLVRRDHH 153 (450)
T ss_dssp EECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE----CCTTTEEEEEEEECCSSCS
T ss_pred eEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccc----ccccccceEEEEEeecccc
Confidence 57899999999998754433223578999997775532 1111234677777766654
No 242
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=94.86 E-value=0.021 Score=36.31 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=46.2
Q ss_pred ceeeeceEEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC----cCCCceEEEccCc---cE
Q psy5692 3 PVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSSG---DL 69 (98)
Q Consensus 3 AVV~Q~Yev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlpsG---eL 69 (98)
++|.|+=. + .|..|.++.|.|.+......--....|.+.. ..++-. ....+||.+..++ -|
T Consensus 2 ~~v~q~~~--~----~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 75 (120)
T 1oaq_L 2 AVVTQESA--L----TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAAL 75 (120)
T ss_dssp CCEEECSE--E----EECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred CcEEcCCc--E----EEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEE
Confidence 56677532 3 3458999999999865431001236897742 122221 1135789886433 69
Q ss_pred EEEeEeeecCCcceeeeee
Q psy5692 70 YVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 70 ~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|++++.+|. +.=-|.+
T Consensus 76 ~I~~~~~~Ds--G~Y~C~~ 92 (120)
T 1oaq_L 76 TITGAQTEDE--AIYFCAL 92 (120)
T ss_dssp EEESCCGGGC--EEEEEEE
T ss_pred EECCCChhhC--eEEEEEE
Confidence 9999998774 3334443
No 243
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=94.85 E-value=0.01 Score=38.95 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=34.2
Q ss_pred cCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 22 GNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 22 GNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
|.++.|.|.+...-. -.....|.+++..|.. +.++. .++.|.|.+++.+|.
T Consensus 18 G~~v~l~C~~~~~~~-~~~~v~W~~~~~~~~~----~~~~~--~~~~L~i~~~~~~d~ 68 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSH-TLMYSYWTKNGVELTA----TRKNA--SNMEYRINKPRAEDS 68 (190)
T ss_dssp SSCEEEEEEEEECSS-CEEEEEEEETTEECTT----CCBCC--SEEEEEESSCCGGGC
T ss_pred CceEEEEEEeccCCC-CceEEEEEECCEECcc----cceEe--ccEEEEEecCCcccC
Confidence 999999999764433 2346789999876643 12221 567788887776654
No 244
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=94.83 E-value=0.016 Score=41.30 Aligned_cols=59 Identities=17% Similarity=0.218 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCCCCc--cceeEEeEEccCCeeeecCcCCCceEEEccC-ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYM--SEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS-GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V--~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps-GeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.++.+- ..-....+|.+++..+.+ ..++|.+..+ |.|.|.+++..|.
T Consensus 131 ~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~---~~~~~~~~~~~~~L~i~~v~~~d~ 192 (339)
T 3o4o_C 131 ILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK---DNEKFLSVRGTTHLLVHDVALEDA 192 (339)
T ss_dssp EEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCT---TCSSEEECTTSSEEEESSCCGGGC
T ss_pred EEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCC---CCceeEEcCCcceEEEcccCHhhC
Confidence 567899999999953211 111234689999876644 3578888764 6899999887664
No 245
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=94.82 E-value=0.036 Score=38.61 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=38.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc-cCccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-SSGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-psGeL~Ir~v~~~~~n 80 (98)
.|..|.++.|.|.+...-.. ....|.+++..|.+ +.+|.+. .++.|.|++++..|.-
T Consensus 17 ~v~~G~~v~l~C~~~~~~p~--~~v~W~~~~~~~~~----~~~~~~~~~~~~L~i~~~~~~d~G 74 (317)
T 2y25_A 17 EVTGECNVLLKCKVANIKKE--THIVWYKDEREISV----DEKHDFKDGICTLLITEFSKKDAG 74 (317)
T ss_dssp EEETTTEEEEEEEEESCCTT--CEEEEEETTEEECC----SCC-----CCEEEEETTCCSTTCS
T ss_pred EECCCCeEEEEEEEcCCCCC--CEEEEEECCeEcCC----CCcEEEECCeEEEEEccCCcccCe
Confidence 67799999999997543211 35689999977643 4566554 3468999888877653
No 246
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=94.82 E-value=0.022 Score=35.41 Aligned_cols=68 Identities=7% Similarity=0.044 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc----CCCceEEEc--c---CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT----DTGGKYVVL--S---SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~----~~dgKY~vl--p---sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+.+....+ ...|.+.+ ..| +... ...|||.+. + +..|.|++++.+|. .
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~--~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds--G 87 (113)
T 1zox_A 12 SGQEQGSLTVQCRYTSGWKDY--KKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA--G 87 (113)
T ss_dssp EEETTSCEEEEEEECGGGTTS--CEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC--E
T ss_pred EEeCCCcEEEEeECCCCcccc--eEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC--E
Confidence 456899999999986433333 47898875 122 2211 135788886 2 23699999998774 4
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
.=.|.+.
T Consensus 88 ~Y~C~v~ 94 (113)
T 1zox_A 88 IYWCGIT 94 (113)
T ss_dssp EEEEEEC
T ss_pred EEEEeeE
Confidence 4455544
No 247
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=94.81 E-value=0.012 Score=40.42 Aligned_cols=61 Identities=13% Similarity=0.219 Sum_probs=39.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-.. .....|++++ ..| +-. ....+||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (225)
T 1op3_H 11 LVKAGGSLILSCGVSNFRIS-AHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE 89 (225)
T ss_dssp EEETTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EecCCCCEEEEEEecCcccC-CceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 56689999999998543211 2347898743 112 111 12468999874 468999999987
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 90 D~ 91 (225)
T 1op3_H 90 DT 91 (225)
T ss_dssp GC
T ss_pred hC
Confidence 74
No 248
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=94.80 E-value=0.013 Score=40.25 Aligned_cols=61 Identities=11% Similarity=0.194 Sum_probs=39.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeec---------CcCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYL---------NTDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p---------~~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+++|.|.+...-.. -....|.+++ ..++- .....+||.+..+ +.|.|++++.+
T Consensus 13 ~v~~G~~v~L~C~~~g~p~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (247)
T 2ghw_B 13 VVQPGKSLRLSCAASGFAFS-SYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 91 (247)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEecCCcEEEEEEeccccCC-CceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH
Confidence 56799999999998644211 1236798742 11111 1124689998763 46999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 92 D~ 93 (247)
T 2ghw_B 92 DT 93 (247)
T ss_dssp GC
T ss_pred HC
Confidence 74
No 249
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=94.79 E-value=0.0048 Score=43.48 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=44.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+...-.. ....|.+++..+......+.|+... +|.|.|.+++..|.- .-.|.+
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~D~G--~Y~C~a 81 (315)
T 1itb_B 16 VSSANEIDVRPCPLNPNEHK--GTITWYKDDSKTPVSTEQASRIHQH-KEKLWFVPAKVEDSG--HYYCVV 81 (315)
T ss_dssp EEETTSCCCCBCCCCSCCCS--SCCCEECTTSCSCSCCCTTSSSEEC-SSBEECTTCCGGGCS--CCEECC
T ss_pred EEcCCCcEEEEeeccCcCCC--ceEEEEeCCCcCccccccCCcEecc-CCeEEECCCChhhCE--EEEEEE
Confidence 56789999999998654311 2678999984332223346677664 679999999888763 444443
No 250
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=94.79 E-value=0.0028 Score=40.84 Aligned_cols=66 Identities=6% Similarity=0.067 Sum_probs=40.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecC------cCCCceEEEc------cCccEEEEeEeeecCCcceee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN------TDTGGKYVVL------SSGDLYVQIRLSITGNLSVKK 85 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~------~~~dgKY~vl------psGeL~Ir~v~~~~~n~~~~~ 85 (98)
.+..|.++.|.|.+...-.- ...|.+++..+... ....+++.+. .+|.|.|.+++.+|. ..-.
T Consensus 32 ~v~~G~~v~L~C~~~g~P~p---~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y~ 106 (137)
T 3qr2_A 32 QRWVGGSVELHCEAVGSPVP---EIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDT--GTYE 106 (137)
T ss_dssp EEETTSCEEEEEEEECSSCC---EEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGC--EEEE
T ss_pred EEeCCCCEEEEEEEeeecCC---eEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccC--EEEE
Confidence 67789999999997544332 46799876433110 0002344443 678999999987764 3444
Q ss_pred eee
Q psy5692 86 MKV 88 (98)
Q Consensus 86 ~~~ 88 (98)
|..
T Consensus 107 C~a 109 (137)
T 3qr2_A 107 CRA 109 (137)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 251
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=94.79 E-value=0.026 Score=35.40 Aligned_cols=67 Identities=12% Similarity=0.116 Sum_probs=41.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe--------ee-ecC---------cCCCceEEEcc--C---ccEEEEeE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV--------NI-YLN---------TDTGGKYVVLS--S---GDLYVQIR 74 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~--------~I-~p~---------~~~dgKY~vlp--s---GeL~Ir~v 74 (98)
.|..|.+|.|.|.+.+.... ....|.+... .| +-. ....+||.+.. + ..|.|+++
T Consensus 9 ~~~~G~~vtL~C~~~~~~~~--~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (115)
T 2atp_B 9 LVQTNHTAKMSCEVKSISKL--TSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSIMNV 86 (115)
T ss_dssp EECTTSCEEEEEECCSSCCS--SEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEECSC
T ss_pred EEcCCCcEEEEEEecCCCCc--ccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEECCC
Confidence 45689999999998644322 3578877541 12 211 11258998864 3 36999999
Q ss_pred eeecCCcceeeeee
Q psy5692 75 LSITGNLSVKKMKV 88 (98)
Q Consensus 75 ~~~~~n~~~~~~~~ 88 (98)
+.+|. +.=-|.+
T Consensus 87 ~~~Ds--G~Y~C~~ 98 (115)
T 2atp_B 87 KPEDS--DFYFCAT 98 (115)
T ss_dssp CGGGC--EEEEEEE
T ss_pred CHHHC--EEEEEeE
Confidence 98774 4444544
No 252
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=94.78 E-value=0.018 Score=39.51 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=42.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-... ....|++.. ..| +-. ....+||.+..+ +.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (220)
T 2fbj_H 11 LVQPGGSLKLSCAASGFDFSK-YWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE 89 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEecCccCCC-ceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChh
Confidence 566899999999985432111 246898753 112 211 124689998753 47999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 90 Ds--G~Y~C~~ 98 (220)
T 2fbj_H 90 DT--ALYYCAR 98 (220)
T ss_dssp GC--EEEEEEE
T ss_pred hC--EEEEEEE
Confidence 75 3444443
No 253
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=94.77 E-value=0.019 Score=38.31 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=37.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeecCcCCCceEEEc-----cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYLNTDTGGKYVVL-----SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p~~~~dgKY~vl-----psGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+....... ....|.+.. ..+. ..+|||.+. .+..|.|++++.+|.
T Consensus 11 ~v~~G~svtL~C~~s~~~~~~-~~v~Wyrq~~g~~~~~li---~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 78 (126)
T 3moq_A 11 TKETGESLTINCVLRDASFEL-KDTGWYRTKLGSTNEQSI---SIGGRYVETVNKGSKSFSLRISDLRVEDS 78 (126)
T ss_dssp EEETTCCEEEEEEEESCSSCC-CEEEEEEEETTCCCCEEC---CCBTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EEeCCCCEEEEEEeecCccCC-ceEEEEEeCCCCCceEEE---EeCCcEEEEEeCCCCEEEEEECcCChHhC
Confidence 455899999999986442111 245898852 1121 136888874 134699999998874
No 254
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=94.75 E-value=0.04 Score=35.46 Aligned_cols=66 Identities=11% Similarity=0.181 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEcc---CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLS---SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|+|.|.+...... ...|.+.. . .++.. ....+||.+.+ +..|.|++++.+|. +.=
T Consensus 14 ~v~~G~~vtL~C~~~~~~~~---~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds--G~Y 88 (119)
T 2e27_L 14 SASLGGKVTITCKANQDIKK---KIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDA--ATY 88 (119)
T ss_dssp EEETTCCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC--EEE
T ss_pred EEeCCCCEEEEEEeCCCCCc---eEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHC--EEE
Confidence 45689999999998655432 36898753 2 23321 12357998865 34699999998764 444
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 89 ~C~~ 92 (119)
T 2e27_L 89 YCLQ 92 (119)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 255
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.73 E-value=0.016 Score=37.43 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----eeeecCcC-CCceEEEcc--------CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----VNIYLNTD-TGGKYVVLS--------SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~~I~p~~~-~dgKY~vlp--------sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|+|.|.+..... .....|.+.. ..|+.... ..+|+...+ +..|.|++++.+|. ..=
T Consensus 19 ~v~~G~~v~L~C~~~~~~~--~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds--G~Y 94 (136)
T 2d9c_A 19 SVAAGESATLRCAMTSLIP--VGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA--GTY 94 (136)
T ss_dssp EEETTSCEEECCEESCCCS--CCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTC--EEE
T ss_pred EEcCCCCEEEEEEEcCCCC--CceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHC--EEE
Confidence 4568999999999865422 2357899875 23443211 114665432 56799999988764 444
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 95 ~C~~ 98 (136)
T 2d9c_A 95 YCVK 98 (136)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 256
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=94.72 E-value=0.033 Score=34.94 Aligned_cols=66 Identities=15% Similarity=0.176 Sum_probs=41.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEccC---ccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSS---GDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+..... ....|.+.. . .++.. ....+||.+..+ ..|.|++++.+|. +.=
T Consensus 15 ~~~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds--G~Y 89 (111)
T 1i3g_L 15 STSVGDRVSITCKASQDVG---TAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDL--ADY 89 (111)
T ss_dssp ECCTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC--SEE
T ss_pred EEcCCCCEEEEEEeCCCCC---CCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHC--EEE
Confidence 4568999999999865432 246888754 1 22321 123578988643 3699999998774 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 90 ~C~~ 93 (111)
T 1i3g_L 90 FCQQ 93 (111)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 257
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=94.72 E-value=0.0084 Score=39.98 Aligned_cols=53 Identities=9% Similarity=-0.008 Sum_probs=37.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.....- .-..|.+++..+.+. .......+.|.|.+++.+|.
T Consensus 104 ~v~~G~~v~l~C~~~~~~----~~~~w~k~g~~~~~~-----~~~~~~~~~L~i~~v~~~D~ 156 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGF----DQFALYKEGDPAPYK-----NPERWYRASFPIITVTAAHS 156 (184)
T ss_dssp SSCCTTCEEEEEECSSCC----CEEEEEECCCCTTSC-----CCCEEEEESSSEEEETTCCS
T ss_pred eecCCCcEEEEEEcCCCC----cEEEEEECCCcCcce-----ecCCCceEEEEEccCCccCC
Confidence 678899999999975332 256899998655331 11234678899999988775
No 258
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=94.71 E-value=0.015 Score=38.72 Aligned_cols=59 Identities=17% Similarity=0.236 Sum_probs=39.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEccC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...- .....|.+++ . .++.. ...++||.+.+. +.|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3r06_A 12 PASLGDRVTINCQASQDI---SNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDI 83 (213)
T ss_dssp EECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EecCCCcEEEEEEeCCCc---CceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccC
Confidence 566899999999986552 3346787632 1 22211 124679988753 4899999998875
No 259
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=94.71 E-value=0.023 Score=40.28 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=37.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-. ...+|.+++..+.+.....+......++.|.|.+++..|.
T Consensus 134 ~v~~g~~v~l~C~~~g~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 192 (334)
T 1ry7_B 134 AVPAANTVRFRCPAAGNPT---PSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDR 192 (334)
T ss_dssp EEETTCCEEEECCCCCSSC---CEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGC
T ss_pred EecCCCcEEEEEEccCCCC---CeEEEEECCEECcccccccceecccceEEEEECCCCcccC
Confidence 4568999999999865432 2478999987665432221212223456788888777664
No 260
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=94.70 E-value=0.03 Score=38.39 Aligned_cols=48 Identities=15% Similarity=0.289 Sum_probs=32.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.++.|.|.+...-... ...|.+++..|... .+.|.|.+++.+|
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~--~v~W~k~g~~l~~~-----------~~~L~i~~v~~~D 65 (204)
T 3sgj_C 18 RVLEKDSVTLKCQGAYSPEDQ--STQWFHNESLISSQ-----------ASSYFIDAATVDD 65 (204)
T ss_dssp EEETTCCEEEEEECCSSSSCC--CEEEEETTEEESCC-----------SSEEEESSCCGGG
T ss_pred EEECCCCEEEEEcCCCCCCCc--EEEEEECCEEcccC-----------ccEEEEecccccC
Confidence 578999999999987654332 26899998666331 1566666665544
No 261
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=94.69 E-value=0.032 Score=34.94 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCCCC-ccceeEEeEEccCC------eeeecC--------cCCCceEEEcc---Cc--cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSY-MSEYIIVTSWIQDD------VNIYLN--------TDTGGKYVVLS---SG--DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd------~~I~p~--------~~~dgKY~vlp---sG--eL~Ir~v~~~ 77 (98)
.+..|.++.|.|.+.+. ..+. ....|.+.. ..++-. ....+||.+.. ++ -|.|++++.+
T Consensus 9 ~~~~G~~v~L~C~~~~~~~~~~-~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~ 87 (116)
T 3bj9_1 9 SSALGTTIRLTCTLRNDHDIGV-YSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPE 87 (116)
T ss_dssp EEETTCCEEEEEEECSSSCGGG-CCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEeecCccCCC-ceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCChh
Confidence 34589999999997643 1122 236897642 223311 11357888863 35 7999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.=-|.+
T Consensus 88 Ds--G~Y~C~~ 96 (116)
T 3bj9_1 88 DE--AMYYCAM 96 (116)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 74 3444444
No 262
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=94.68 E-value=0.03 Score=35.20 Aligned_cols=68 Identities=19% Similarity=0.265 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCcc----ceeEEeEEccCC------eeeecC----cCCCceEEEccCc---cEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMS----EYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~----d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n 80 (98)
.|..|.+|.|.|.+..... +. ....|.+.. ..++.. ....+||.+.+++ .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds- 89 (114)
T 1eeq_A 12 AVSLGERATINCKSSQSVLDSSNSK-NYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDV- 89 (114)
T ss_dssp EECTTSCEEEEEEESSCCEETTTTE-ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred EEcCCCeEEEEEEcCCCccccccCC-ccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcccC-
Confidence 4558999999999764432 11 346898753 223321 1236899987543 699999998774
Q ss_pred cceeeeee
Q psy5692 81 LSVKKMKV 88 (98)
Q Consensus 81 ~~~~~~~~ 88 (98)
..=-|.+
T Consensus 90 -G~Y~C~~ 96 (114)
T 1eeq_A 90 -AVYYCQQ 96 (114)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEE
Confidence 3444443
No 263
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=94.67 E-value=0.013 Score=41.36 Aligned_cols=68 Identities=12% Similarity=0.223 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ec---------CcCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YL---------NTDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p---------~~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.++.+-... ....|.+.. ..+ +- .....|||.+..++. |.|++++.+
T Consensus 34 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 112 (256)
T 3sob_H 34 LVQPGGSLRLSCAASGFTFTN-SYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAE 112 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEeeccccCC-CEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcc
Confidence 567899999999986543222 346787632 122 11 112458999876544 999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..--|.+
T Consensus 113 Ds--G~Y~C~~ 121 (256)
T 3sob_H 113 DT--AVYYCAR 121 (256)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 75 3444444
No 264
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=94.66 E-value=0.02 Score=38.73 Aligned_cols=61 Identities=11% Similarity=0.205 Sum_probs=39.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc-----------CCCceEEEccC---c--cEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT-----------DTGGKYVVLSS---G--DLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~-----------~~dgKY~vlps---G--eL~Ir~v~ 75 (98)
.|..|.+|+|.|.+...-.+. ....|.+++ ..| +... ...+||.+..+ | .|.|++++
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 89 (220)
T 1pz5_B 11 LVQPGGSMKLSCVASGFTFSN-YWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLR 89 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred EEcCCCeEEEEEEEcCCccCC-ccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCC
Confidence 567899999999985432122 346898753 112 2111 12589988742 3 89999999
Q ss_pred eecC
Q psy5692 76 SITG 79 (98)
Q Consensus 76 ~~~~ 79 (98)
..|.
T Consensus 90 ~~D~ 93 (220)
T 1pz5_B 90 AEDT 93 (220)
T ss_dssp GGGC
T ss_pred HHHC
Confidence 8875
No 265
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=94.65 E-value=0.018 Score=38.80 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-. ....|.+++..|.++ ...++.+.. .+.|.|++++..|.
T Consensus 29 ~~~~G~~v~l~C~~~g~p~---p~i~W~~~g~~l~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~ 88 (215)
T 3mtr_A 29 YTWEGNQVNITCEVFAYPS---ATISWFRDGQLLPSS--NYSNIKIYNTPSASYLEVTPDSENDF 88 (215)
T ss_dssp EECTTCCEEEEEEEEEESC---CEEEEEETTEESSCS--SSCSEEEEEETTEEEEEECCCSGGGC
T ss_pred EEECCCCEEEEEEEeecCC---CEEEEEECCeECCCC--CCccEEEecCCCeeEEEEecCChhhC
Confidence 6778999999998643322 256899999766432 235666653 67899998887764
No 266
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=94.64 E-value=0.022 Score=39.16 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---ee-ecCc---------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---NI-YLNT---------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~I-~p~~---------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+...-... ....|.+++ . .| +... ...+||.+.. ++.|.|++++.+
T Consensus 138 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 216 (247)
T 1svz_A 138 LKKPGETVKISCKATNYAFTD-YSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNE 216 (247)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred eecCCCcEEEEEEEcCcccCC-cEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChh
Confidence 467899999999986542111 235898853 1 11 1111 1257888864 358999999988
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ..-.|.+.
T Consensus 217 Ds--G~Y~C~a~ 226 (247)
T 1svz_A 217 DT--ATYFCVRD 226 (247)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEe
Confidence 75 34445443
No 267
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=94.62 E-value=0.033 Score=38.16 Aligned_cols=59 Identities=20% Similarity=0.241 Sum_probs=39.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc--CCe----eeecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ--DDV----NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~--Dd~----~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-.. ...|.+ ++. .++.. ....+||.+..++ .|.|++++.+|.
T Consensus 146 ~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 217 (247)
T 2ghw_B 146 SLSPGERATLSCRASQSVRS---NLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDF 217 (247)
T ss_dssp EECTTSCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGC
T ss_pred EecCCCcEEEEEEeCCCccc---eEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHC
Confidence 46789999999998655433 578988 332 12211 1235789886543 599999998874
No 268
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=94.62 E-value=0.02 Score=38.16 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=37.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C--e-eeecCc--------CCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D--V-NIYLNT--------DTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d--~-~I~p~~--------~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...- -.....|.+. . . .++... ...+||.+.. ++.|.|++++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (218)
T 3s96_B 11 SFSLGASAKLTCTLNSQH--STYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDE 87 (218)
T ss_dssp EEETTSCEEEEEEECGGG--TTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EECCCCcEEEEEECCCCC--CCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccC
Confidence 456899999999986441 1234578772 2 1 222111 1346888765 44599999988775
No 269
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=94.61 E-value=0.025 Score=39.37 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=43.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc--------C-CCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT--------D-TGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~--------~-~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+...-.. .....|++.+ ..+|... . ..|||.+.. ++.|.|++++.+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (242)
T 1hxm_B 12 TKTLSKTARLECVVSGITIS-ATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQ 90 (242)
T ss_dssp EEETTCCEEEEEEEESSCTT-TSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEeCCcccc-CceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcc
Confidence 45689999999997543112 1347898742 1222211 1 468998873 357999999988
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ..-.|.+.
T Consensus 91 D~--G~Y~C~~~ 100 (242)
T 1hxm_B 91 DI--ATYYCALW 100 (242)
T ss_dssp GC--EEEEEEEE
T ss_pred cC--EEEEEeee
Confidence 75 45555554
No 270
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=94.60 E-value=0.016 Score=40.32 Aligned_cols=59 Identities=19% Similarity=0.294 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C---eeeecC----cCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D---VNIYLN----TDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d---~~I~p~----~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...... ...|+++ . ..++.. ....+||.+..+|. |.|++++.+|.
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 220 (256)
T 3umt_A 149 SASLGERVSITCRASQDIGS---NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDF 220 (256)
T ss_dssp EECTTCCEEEEEEESSCCTT---CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEECCCCEEEEEEEecCCCc---EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHC
Confidence 57789999999998664443 5679873 2 122211 11357888876554 99999988874
No 271
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=94.60 E-value=0.018 Score=37.09 Aligned_cols=59 Identities=14% Similarity=0.236 Sum_probs=39.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...... ...|.+.. ..|+... ...+||.+.. ++.|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~---~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 83 (120)
T 1mqk_L 12 SASVGETVTITCRASENIYS---YLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDF 83 (120)
T ss_dssp EECTTCCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEcCCCcEEEEEEeCCCCCc---eEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHC
Confidence 45689999999998654422 35798753 1233211 2368998864 35799999998763
No 272
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=94.59 E-value=0.021 Score=37.11 Aligned_cols=57 Identities=21% Similarity=0.238 Sum_probs=36.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc-cC--ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-SS--GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-ps--GeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-. ....|.+++..|.+... .++.+. .. +.|.|.+++..|.
T Consensus 16 ~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~ 75 (194)
T 2a38_A 16 VVLEGSTATFEAHISGFPV---PEVSWFRDGQVISTSTL--PGVQISFSDGRAKLTIPAVTKANS 75 (194)
T ss_dssp EEETTSCEEEEEEEEEESC---CEEEEEESSSBCCTTTS--TTCEEEEETTEEEEEESSCCGGGC
T ss_pred EEECCCEEEEEEEEEecCC---CEEEEEECCEEcccccC--CceEEEeCCCEEEEEECCCCcccC
Confidence 6778999999999743222 24789999876644321 233332 23 3688888877664
No 273
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=94.59 E-value=0.026 Score=36.98 Aligned_cols=66 Identities=17% Similarity=0.202 Sum_probs=41.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeecCcCCCceEEEc--c---CccEEEEeEeeecCCcceeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYLNTDTGGKYVVL--S---SGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p~~~~dgKY~vl--p---sGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
.|..|.++.|.|.+....-.. ....|.+.. ..++. .++||.+. + +..|.|++++.+|. ++=-|.
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~-~~v~Wyrq~~g~~~~~~~~---~~~R~~~~~~~~~~~~~L~I~~~~~~Ds--G~Y~C~ 84 (121)
T 2i24_N 11 TKETGESLTINCVVRDSRCVL-STGYWYRKPPGSRNEESIS---DGGRYVETVNRGSKSFSLRINDLTVKDS--GTYRCK 84 (121)
T ss_dssp EEETTCCEEEEEEECSCCCCE-EEEEEEEECTTCSCCEEEC---SBTTEEEEEETTTTEEEEEECSCCGGGC--EEEEEE
T ss_pred EEecCCcEEEEeEccCCCCCC-CEEEEEEeCCCCCceeeEe---cCCCeEEEecCCCCEEEEEECCCChhhC--EEEEEE
Confidence 345899999999985432122 356998864 11221 35788763 2 45699999998763 455555
Q ss_pred eh
Q psy5692 88 VE 89 (98)
Q Consensus 88 ~~ 89 (98)
+.
T Consensus 85 ~~ 86 (121)
T 2i24_N 85 PE 86 (121)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 274
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=94.58 E-value=0.016 Score=40.37 Aligned_cols=54 Identities=7% Similarity=-0.051 Sum_probs=35.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.....- . ....|.+|+..+.+ .+....++|.|.|.+|+.+|.
T Consensus 116 ~v~~G~~v~L~C~~~~~~--~-~~~~W~k~g~~~~~-----~~~~~~~~~~L~I~~v~~~D~ 169 (218)
T 1uct_A 116 VLMPGENISLTCSSAHIP--F-DRFSLAKEGELSLP-----QHQSGEHPANFSLGPVDLNVS 169 (218)
T ss_dssp EECTTCCCEEEEECSSSC--C-SEEEEEETTCSSCC-----SEEECSSSEEEECCSCCGGGC
T ss_pred ccCCCCCEEEEEeCCCCC--C-CEEEEEECCCcccc-----cccCCCccCEEEEccCCcccC
Confidence 678999999999433221 2 24689999865432 233344678888888877664
No 275
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=94.57 E-value=0.046 Score=37.59 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=31.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+-.|.+++|.|.+| ....+|++|+..|.... ..++.|.|.+++..|
T Consensus 14 ~~~~G~~v~L~C~~p------~~~i~W~k~g~~l~~~~--------~~~~~L~i~~v~~~D 60 (204)
T 1sy6_A 14 DYQEDGSVLLTCDAE------AKNITWFKDGKMIGFLT--------EDKKKWNLGSNAKDP 60 (204)
T ss_dssp CCCSSSEEEEEECSC------SSEEEEEETTEEEEEEE--------SSCCCEEEEEGGGCC
T ss_pred eecCCCeEEEEEcCC------CCEEEEEECCEECCCCC--------CCCCeEEeCCCCcCC
Confidence 345799999999984 13578999986664321 145667777766554
No 276
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=94.57 E-value=0.014 Score=40.52 Aligned_cols=68 Identities=10% Similarity=0.024 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--c-------CcCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--L-------NTDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p-------~~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.+..+-... ....|++.. ..| + . .....|||.+..++. |.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (226)
T 3mlr_H 11 VKQPGQSLKISCKSSGYNFLD-SWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQAS 89 (226)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGG
T ss_pred EEecCCCEEEEEEecCccccC-CEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcc
Confidence 466899999999986442222 346787632 122 1 1 112358999875544 999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.--|.+
T Consensus 90 Ds--G~Y~C~~ 98 (226)
T 3mlr_H 90 DT--GKYFCTR 98 (226)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEeE
Confidence 74 4444443
No 277
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=94.55 E-value=0.027 Score=39.33 Aligned_cols=69 Identities=10% Similarity=0.073 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccCC-----eee---e-----cC-------cCCCceEEEccCcc-----EEE
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQDD-----VNI---Y-----LN-------TDTGGKYVVLSSGD-----LYV 71 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~Dd-----~~I---~-----p~-------~~~dgKY~vlpsGe-----L~I 71 (98)
.|..|.+|.|.|.+..+-.+ -.....|++.. ..| + +. ....|||.+..++. |.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 90 (239)
T 3tv3_H 11 LVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKL 90 (239)
T ss_dssp EECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEE
T ss_pred EEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEE
Confidence 46689999999998654322 01246887632 222 1 01 12358999875443 999
Q ss_pred EeEeeecCCcceeeeee
Q psy5692 72 QIRLSITGNLSVKKMKV 88 (98)
Q Consensus 72 r~v~~~~~n~~~~~~~~ 88 (98)
++++.+|. +.--|.+
T Consensus 91 ~~v~~~Ds--G~Y~C~~ 105 (239)
T 3tv3_H 91 NSVTAADT--ATYYCAR 105 (239)
T ss_dssp CSCCGGGC--EEEEEEE
T ss_pred CCCChhhC--EEEEEEE
Confidence 99998885 4444544
No 278
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=94.54 E-value=0.024 Score=36.78 Aligned_cols=61 Identities=10% Similarity=0.016 Sum_probs=41.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ...+|.+++..+.+ +......++.|.|.+++.+|. ..-.|.+
T Consensus 124 ~~~~g~~~~l~C~~~g~p~---p~v~W~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~d~--G~Y~C~a 184 (201)
T 3s97_C 124 YALMGQNVTLECFALGNPV---PDIRWRKVLEPMPS-----TAEISTSGAVLKIFNIQLEDE--GIYECEA 184 (201)
T ss_dssp EEETTCCEEEEEEEEEESC---CEEEEEETTBCCCT-----TCEEETTTTEEEECSCCGGGC--EEEEEEE
T ss_pred EEecCCcEEEEEEccCCCC---CceEEEeCCCcCCC-----ceeecCCCCEEEEccCChhhC--EEEEEEE
Confidence 6789999999998743322 24689999875532 344445678899999887763 3444544
No 279
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=94.54 E-value=0.043 Score=35.81 Aligned_cols=66 Identities=21% Similarity=0.353 Sum_probs=43.4
Q ss_pred ceeecCeEEEEcc-CCCCccceeEEeEEccCCe-eeecCcC-----CCceEEEc-cCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQ-IPSYMSEYIIVTSWIQDDV-NIYLNTD-----TGGKYVVL-SSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~-IPs~V~d~V~V~SW~~Dd~-~I~p~~~-----~dgKY~vl-psGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|. +..+-.. ..+|.+++. .|..... ..++|.+. .++.|.|++++.+|.- .-.|.+
T Consensus 115 ~~~~g~~~~l~C~~~~~~p~~---~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G--~Y~C~a 188 (212)
T 1f97_A 115 SVTIGNRAVLTCSEHDGSPPS---EYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSG--EYYCQA 188 (212)
T ss_dssp EEETTSCEEEEEECSCCBSCC---EEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCE--EEEEEE
T ss_pred ccCCCCeEEEEEEcccCcCCC---EEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCc--EEEEEE
Confidence 4678999999999 4433222 468999997 7644221 12567774 5889999998887753 445544
No 280
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=94.53 E-value=0.024 Score=38.94 Aligned_cols=69 Identities=13% Similarity=0.134 Sum_probs=42.0
Q ss_pred ceeecCeEEEEccCCCC-ccceeEEeEEccCC-----eee---ecC---------cCCCceEEEccCc-----cEEEEeE
Q psy5692 18 NVILGNTAVLRCQIPSY-MSEYIIVTSWIQDD-----VNI---YLN---------TDTGGKYVVLSSG-----DLYVQIR 74 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd-----~~I---~p~---------~~~dgKY~vlpsG-----eL~Ir~v 74 (98)
.|..|.+|+|.|.+..+ .........|++.. ..+ ++. ....|||.+..++ .|.|+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 90 (232)
T 3qhz_H 11 LVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNM 90 (232)
T ss_dssp EECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred EECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcC
Confidence 46689999999998543 22232334787632 222 111 1234799987544 3999999
Q ss_pred eeecCCcceeeeee
Q psy5692 75 LSITGNLSVKKMKV 88 (98)
Q Consensus 75 ~~~~~n~~~~~~~~ 88 (98)
+.+|. ..-.|.+
T Consensus 91 ~~~Ds--G~Y~C~~ 102 (232)
T 3qhz_H 91 DPVDT--ATYYCAR 102 (232)
T ss_dssp CGGGC--EEEEEEE
T ss_pred ChhhC--EEEEEEE
Confidence 98875 3444444
No 281
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=94.47 E-value=0.057 Score=34.69 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=38.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----eeeecCcC-CCceEEEc--------cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----VNIYLNTD-TGGKYVVL--------SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~~I~p~~~-~dgKY~vl--------psGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+.+.... ....|.+.. ..|+.... ..+|+... .++.|.|++++.+|.
T Consensus 14 ~v~~G~~vtL~C~~~~~~~~--~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 86 (127)
T 2jju_A 14 SVAAGESATLRCAMTSLIPV--GPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA 86 (127)
T ss_dssp EEETTSCEEECCEESCCCSC--CCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGC
T ss_pred EEeCCCCEEEEEEEeCCCCC--CEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHC
Confidence 45689999999998654322 347898875 23444211 12466542 156799999998764
No 282
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=94.47 E-value=0.018 Score=41.50 Aligned_cols=68 Identities=6% Similarity=0.102 Sum_probs=42.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc--------CCCceEEEccCcc-----EEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT--------DTGGKYVVLSSGD-----LYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~--------~~dgKY~vlpsGe-----L~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+..+-... ....|++.. ..| +-.. ...|||.+..++. |.|++++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 89 (263)
T 3iu4_H 11 LVAPSQSLSITCTVSGFSLSR-YSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDD 89 (263)
T ss_dssp EECTTSCEEEEEEEESSCGGG-SCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEeccccCCc-eEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHH
Confidence 567899999999986432222 345787632 222 2111 2358999876544 9999999888
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. +.-.|.+
T Consensus 90 s--G~Y~C~~ 97 (263)
T 3iu4_H 90 T--AMYYCAR 97 (263)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 4444444
No 283
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=94.47 E-value=0.016 Score=38.59 Aligned_cols=28 Identities=25% Similarity=0.204 Sum_probs=21.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV 49 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~ 49 (98)
.|..|.+++|.|..+.- .....|.+++.
T Consensus 18 ~v~~G~~v~L~C~~~~~----~~~~~W~k~g~ 45 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPPG----VDLYRLEKLSS 45 (184)
T ss_dssp EEETTCCEEEEEECSTT----CSEEEEEETTT
T ss_pred cccCCCcEEEEEeCCCC----CCEEEEEECCc
Confidence 57899999999998652 12467988863
No 284
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=94.46 E-value=0.042 Score=37.32 Aligned_cols=69 Identities=16% Similarity=0.151 Sum_probs=43.7
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---cEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+++|.|.+...-.+ -.....|.+++ . .++.. ....+||.+..+| .|.|++++.+|. ..
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~ 89 (240)
T 1moe_A 12 AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV--AT 89 (240)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC--EE
T ss_pred EecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhC--EE
Confidence 46689999999998654310 03446898752 1 22211 1236799997655 699999998774 34
Q ss_pred eeeee
Q psy5692 84 KKMKV 88 (98)
Q Consensus 84 ~~~~~ 88 (98)
-.|.+
T Consensus 90 Y~C~~ 94 (240)
T 1moe_A 90 YYCQQ 94 (240)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44544
No 285
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=94.42 E-value=0.088 Score=33.31 Aligned_cols=69 Identities=12% Similarity=0.110 Sum_probs=42.0
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCC----eee--e-cCc------CCCceEEEcc----CccEEEEeEeeecCCc
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDD----VNI--Y-LNT------DTGGKYVVLS----SGDLYVQIRLSITGNL 81 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~~I--~-p~~------~~dgKY~vlp----sGeL~Ir~v~~~~~n~ 81 (98)
+..|.+|+|.|.+.+..........|.+.. ..| + ++. ...||+.+.. +..|.|++++.+|.
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~-- 90 (119)
T 2pnd_A 13 GTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVPGDVSLQINTLQMDDR-- 90 (119)
T ss_dssp EETTSCEEECCBCCCCTTCEEEEEEEEEEETTEEEEEEEEETTEEECCSGGGTTTEEECCSSTTBCCEEESSCCGGGC--
T ss_pred EEcCCcEEEEEEEcCCCCCCceEEEEEEeCCCCceEEEEEcCCCceeecccccCcEEEccCCCCCEEEEEccCCcccC--
Confidence 457999999999865322222346788642 222 2 111 1257777652 45699999999885
Q ss_pred ceeeeeeh
Q psy5692 82 SVKKMKVE 89 (98)
Q Consensus 82 ~~~~~~~~ 89 (98)
..=.|.+.
T Consensus 91 G~Y~C~v~ 98 (119)
T 2pnd_A 91 NHYTCEVT 98 (119)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 44556553
No 286
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=94.41 E-value=0.028 Score=38.99 Aligned_cols=57 Identities=11% Similarity=0.025 Sum_probs=38.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC----ccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS----GDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps----GeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|..|.++.|.|.+... .+|.+++..+ ..++....+ +.|.|.+++.+|. ..-.|...
T Consensus 11 ~v~~G~~v~L~C~~~~~-------v~W~~~~~~~------~~~~~~~~~~~~~~~L~i~~~~~~D~--G~Y~C~a~ 71 (289)
T 3mjg_X 11 VLNVSSTFVLTCSGSAP-------VVWERMSQEP------PQEMAKAQDGTFSSVLTLTNLTGLDT--GEYFCTHN 71 (289)
T ss_dssp ECCTTCCEEEEEEESSC-------CEEEBTTBCC------SEEEEECTTSCEEEEEEECSCCGGGC--EEEEEECC
T ss_pred EEeCCCcEEEEEeccce-------EEEECCCCCc------ccceeccCCCceeEEEEEccCChhhC--EEEEEEEc
Confidence 35689999999998754 7899998554 234444443 4788888887764 34555543
No 287
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=94.40 E-value=0.019 Score=41.81 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--ee----eec---------CcCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--VN----IYL---------NTDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~~----I~p---------~~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+...-.. .....|++++ .. ++. .....+||.+..+ +.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (344)
T 1za6_B 11 VVKPGASVKISCKASGYTFT-DHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSE 89 (344)
T ss_dssp EECTTCCEEEEEEEESSCTT-SSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEcCCcccc-ccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence 46789999999998543111 1237898762 11 111 1124689998753 57999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ..-.|.+.
T Consensus 90 D~--G~Y~C~~~ 99 (344)
T 1za6_B 90 DT--AVYFCTRS 99 (344)
T ss_dssp GC--EEEEEEET
T ss_pred cC--EEEEEEEe
Confidence 75 34445443
No 288
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=94.40 E-value=0.0058 Score=43.63 Aligned_cols=53 Identities=11% Similarity=-0.031 Sum_probs=34.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.++.. .....|.+|+..+.+. ......+|.|.|++++.+|.
T Consensus 34 ~v~~G~~v~L~C~~~~~----~~~~~W~k~g~~~~~~-----~~~~~~~~~L~I~~v~~~D~ 86 (316)
T 3vh8_G 34 VVPRGGHVTLRCHYRHR----FNNFMLYKEDRIHIPI-----FHGRIFQESFNMSPVTTAHA 86 (316)
T ss_dssp EEETTSCEEEEEEBTTB----CCSEEEEESSCSSSCH-----HHHCCBSSCEEECSCCGGGC
T ss_pred ccCCCCCEEEEEEccCC----CceEEEEeCCCcccee-----ecCCcceEEEEECCCCcccC
Confidence 67799999999999866 2445699998554331 11112366777777666553
No 289
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=94.39 E-value=0.012 Score=38.38 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=39.1
Q ss_pred ceeecCeEEEEccCC-CCccceeEEeEEccCC--eeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIP-SYMSEYIIVTSWIQDD--VNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IP-s~V~d~V~V~SW~~Dd--~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.++ .+-. ...+|.+++ ..+ + .+.+....+|.|.|.+++.+|. ..-.|.+
T Consensus 132 ~~~~g~~v~l~C~~~~g~p~---~~v~W~~~~~~~~~-~----~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a 195 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPKEGSLP---LQFEWQKLSDSQTM-P----TPWLAEMTSPVISVKNASSEYS--GTYSCTV 195 (214)
T ss_dssp CCBTTCCEEEEEECSBCCSS---CEEEEEECSTTCCC-C----GGGGGGTTSSEEEECSCCGGGC--EEEEEEE
T ss_pred ceecCCcEEEEecCCCCCCC---CEEEEEECCCCCcc-C----ccceeccCCCEEEEecCCHHHC--EEEEEEE
Confidence 577899999999983 3322 346899964 333 2 2344445677888888887773 3444543
No 290
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=94.39 E-value=0.02 Score=46.18 Aligned_cols=51 Identities=22% Similarity=0.432 Sum_probs=40.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~ 75 (98)
.+..|.++.|.|.+..+- ....+|.+|+..+. .+.++.+.++|.|.|.++.
T Consensus 537 ~v~~G~~v~l~C~~~g~p---~~~i~W~k~~~~l~----~~~~~~~~~~~~l~i~~v~ 587 (816)
T 3dmk_A 537 AIVAGETLIVTCPVAGYP---IDSIVWERDNRALP----INRKQKVFPNGTLIIENVE 587 (816)
T ss_dssp EEETTCCEEEECCEECSS---EEEEEEEETTEESC----CSTTEEECTTSEEEESSCC
T ss_pred EEecCCeEEEEEEecCCC---CCEEEEEECCeEcc----cCCceEEecCCeEEEEecC
Confidence 677899999999986543 23678999997663 3578888999999999986
No 291
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=94.39 E-value=0.06 Score=37.13 Aligned_cols=61 Identities=21% Similarity=0.161 Sum_probs=39.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----ee-eecCc----CCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VN-IYLNT----DTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~-I~p~~----~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.++..-.. .....|.+++ .. ++... ...+||.+..+| .|.|++++.+|.
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 13 SGAPGQRVTISCSGSSSNIG-SNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDE 86 (256)
T ss_dssp EECTTCCEEEEEECCTTTTT-TSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEcCCCcEEEEEecCCCCCC-CceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhC
Confidence 45689999999998653111 1246798742 22 22111 135799987655 699999998875
No 292
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=94.38 E-value=0.046 Score=37.90 Aligned_cols=68 Identities=10% Similarity=0.062 Sum_probs=42.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc--------CCCceEEEcc-Cc----cEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT--------DTGGKYVVLS-SG----DLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~--------~~dgKY~vlp-sG----eL~Ir~v~~~~ 78 (98)
.|..|.+|.|.|.+...-.. .....|++.. ..+|-.. ...+||.+.. .| -|.|++++.+|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (230)
T 1ypz_F 12 SRPRDETAQISCKVFIESFR-SVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEED 90 (230)
T ss_dssp EEETTSCEEEEEEECCGGGG-GCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEeeccccC-ccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhh
Confidence 35589999999998654212 2347898743 1223211 1468999873 32 69999999877
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ..--|.+
T Consensus 91 ~--G~Y~C~~ 98 (230)
T 1ypz_F 91 E--AIYYCSY 98 (230)
T ss_dssp C--SEEEEEE
T ss_pred C--EEEEEEE
Confidence 5 3334444
No 293
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=94.37 E-value=0.046 Score=38.39 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=39.3
Q ss_pred ceeecCeEEEEccCCCCcc---ceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS---EYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~---d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+.. .=....+|.+++..|.+ ...++ ...+|.|.|++++.+|.
T Consensus 114 ~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~---~~~~~-~~~~~~L~i~~v~~~d~ 174 (315)
T 1itb_B 114 KLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL---DNIHF-SGVKDRLIVMNVAEKHR 174 (315)
T ss_dssp EEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC---CSSSE-EEETTEEEESSCCGGGC
T ss_pred EEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC---ccceE-eecCceEEEEeceehhC
Confidence 5678999999999832221 11234789999977754 23344 45688999998887764
No 294
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=94.36 E-value=0.029 Score=36.67 Aligned_cols=48 Identities=13% Similarity=0.214 Sum_probs=30.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.++.|.|.+...-.. ...+|.+++..+.. .++.|.|.+++.+|
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~--~~i~W~~~~~~~~~-----------~~~~L~i~~v~~~d 62 (176)
T 1f2q_A 15 RIFKGENVTLTCNGNNFFEV--SSTKWFHNGSLSEE-----------TNSSLNIVNAKFED 62 (176)
T ss_dssp EEETTCCEEEECCTTCC------CCEEEETTEECSC-----------CSSEEEECSCCGGG
T ss_pred ceecCCcEEEEEeCCCCCCc--ceEEEEECCeECCC-----------CceEEEEeccceec
Confidence 57799999999998765432 23589998855421 14556666655544
No 295
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=94.33 E-value=0.041 Score=38.11 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=39.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee---ec------CcCCCceEEEccCc-----cEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI---YL------NTDTGGKYVVLSSG-----DLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I---~p------~~~~dgKY~vlpsG-----eL~Ir~v~~~~ 78 (98)
.|..|.+++|.|.+..+... .....|.+.+ ..+ ++ .....+||.+..++ .|.|++++.+|
T Consensus 19 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 97 (257)
T 3gkz_A 19 LVKPSQTLSLTCSVTGDSVT-SGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED 97 (257)
T ss_dssp EECTTCCEEEEEEEEESCCS-SCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEEEccccc-ceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence 56789999999997643211 1345787632 111 11 11245799998644 59999999887
Q ss_pred C
Q psy5692 79 G 79 (98)
Q Consensus 79 ~ 79 (98)
.
T Consensus 98 s 98 (257)
T 3gkz_A 98 T 98 (257)
T ss_dssp C
T ss_pred C
Confidence 4
No 296
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=94.32 E-value=0.0091 Score=39.82 Aligned_cols=53 Identities=8% Similarity=-0.007 Sum_probs=32.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEE--ccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV--LSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~v--lpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|.++.- .....|.+++..+.+. .+... ..+|.|.|.+++.+|
T Consensus 15 ~v~~G~~v~L~C~~~~~----~~~~~w~k~g~~~~~~----~~~~~~~~~~~~L~i~~v~~~D 69 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTLE----AREYRLDKEESPAPWD----RQNPLEPKNKARFSIPSMTEDY 69 (196)
T ss_dssp EEETTCCEEEEEECCTT----CCEEEEEETTSCSCSE----EECCCSSSSEEEEEESSCCGGG
T ss_pred cCCCCCcEEEEeeCCCC----CCEEEEEECCCCCccc----ccccccCCceEEEEeccCCccc
Confidence 57789999999998752 2356788887544221 11111 234667776666554
No 297
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=94.32 E-value=0.017 Score=39.69 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=40.5
Q ss_pred ceeecCeEEEEccCCCCccce-eEEeEEccCC------eeeecC--------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEY-IIVTSWIQDD------VNIYLN--------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~-V~V~SW~~Dd------~~I~p~--------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-... ....+|++++ ..++.. ....|||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (228)
T 3bae_H 11 LLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTA 90 (228)
T ss_dssp EECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcc
Confidence 567999999999986443211 1456898742 112211 12358999874 368999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 91 D~ 92 (228)
T 3bae_H 91 DT 92 (228)
T ss_dssp GC
T ss_pred cC
Confidence 75
No 298
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=94.31 E-value=0.011 Score=38.65 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc---CccEEEEe-EeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS---SGDLYVQI-RLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp---sGeL~Ir~-v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-. ...+|.+++..|.+ +++|.+.. .+.|.|.+ ++..|.- .-.|.+
T Consensus 115 ~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~~d~G--~Y~C~a 180 (197)
T 2j8h_A 115 HALRGEVVSIKIPFSGKPD---PVITWQKGQDLIDN----NGHYQVIVTRSFTSLVFPNGVERKDAG--FYVVCA 180 (197)
T ss_dssp EEETTCCCEEEEEEEEESC---CEEEEEESSCEECS----SSSCEEEECSSEEEEECTTCCCGGGCE--EEEEEE
T ss_pred EEeCCCEEEEEEEEEecCC---CcEEEEECCEEeec----CCCEEEEEcCCceEEEEeCCCCcccCE--eEEEEE
Confidence 4567999999999753322 26789999876643 56777653 46777877 7666542 344443
No 299
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=94.31 E-value=0.0096 Score=40.98 Aligned_cols=59 Identities=17% Similarity=0.288 Sum_probs=37.5
Q ss_pred eeecCeEEEEccCCCCccce-eEEeEEccCCeeeecC------cCCCceEEEccCccEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYMSEY-IIVTSWIQDDVNIYLN------TDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~-V~V~SW~~Dd~~I~p~------~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
|..|.+|.|.|.+..+-.|. ....+|.+++..+... ...+|+|.. ++.|.|.+++..|+
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~~~~~D~ 88 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRV--VSTLPIQHQDWMSG 88 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEE--EEEEECCHHHHHTT
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEE--EEEEEEcHHHcCCC
Confidence 67899999999986432111 1458999998554221 123567654 45677777766553
No 300
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=94.29 E-value=0.015 Score=36.56 Aligned_cols=67 Identities=15% Similarity=0.152 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----eeeecCcC-CCceEEEc-----c---CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----VNIYLNTD-TGGKYVVL-----S---SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~~I~p~~~-~dgKY~vl-----p---sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+|+|.|.+.+.... ....|.+++ ..|+.... ..+|+... + +..|.|++++.+|. ..=
T Consensus 18 ~~~~G~~v~L~C~~~~~~~~--~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds--G~Y 93 (120)
T 2yz1_A 18 SVAAGDSTVLNCTLTSLLPV--GPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDA--GTY 93 (120)
T ss_dssp EECTTCCEEECCEESCCCSC--CCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGC--EEE
T ss_pred EEeCCCCEEEEeEECCCCCC--cEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHC--EEE
Confidence 46689999999998654222 246899875 24443211 11233221 1 25799999998774 444
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 94 ~C~~ 97 (120)
T 2yz1_A 94 YCVK 97 (120)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4544
No 301
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=94.29 E-value=0.028 Score=42.93 Aligned_cols=59 Identities=19% Similarity=0.180 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----ee-eec----CcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VN-IYL----NTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~-I~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...- ....+|++++ .. ++. ....++||.+.++| .|.|++++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (523)
T 2rcj_C 11 SGTPGQRVTISCTGTSSG---SITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDE 82 (523)
T ss_pred EEecCCcEEEEEEEeccC---CceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhC
Confidence 456899999999986432 3457899874 11 111 11235899876554 699999998775
No 302
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=94.27 E-value=0.013 Score=39.12 Aligned_cols=65 Identities=14% Similarity=0.196 Sum_probs=41.6
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
++.|+++.|.|.+..+-- ....+|.+|+..+.+. ...+|.|.+. +.|.|.++...|+ ..-.|.++
T Consensus 126 ~~~g~~v~l~C~~~g~~P--~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~--g~Y~C~a~ 198 (213)
T 3nl4_L 126 LVATGTVTIVCVANKYFP--DVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLS--STLTLTSTEYNSH--KEYTCKVT 198 (213)
T ss_dssp HHTTSEEEEEEEEEEEBS--CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTC--CEEEEEEE
T ss_pred hccCCcEeEEEEEecccC--CcEEEEEeCCccCCCCeecccCcccCCCCeEEEE--EEEEecHHHcCCC--CeEEEEEE
Confidence 456999999999754211 2356899998666432 2356788764 5677777665443 34555554
No 303
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=94.23 E-value=0.075 Score=38.56 Aligned_cols=62 Identities=8% Similarity=-0.049 Sum_probs=40.7
Q ss_pred ceeecCeEEEEccCCCCccc-e-eEEeEEccCCeeeecC----cCCCceEEEc-----------c--CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-Y-IIVTSWIQDDVNIYLN----TDTGGKYVVL-----------S--SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~-V~V~SW~~Dd~~I~p~----~~~dgKY~vl-----------p--sGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+...... + .....|..++..+.++ .-.+++|.+. . ++.|.|++++.+|
T Consensus 187 ~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 266 (363)
T 1wio_A 187 YKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQY 266 (363)
T ss_dssp EEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGG
T ss_pred EEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCc
Confidence 56789999999987643332 2 3456899988554331 0025677664 3 4489999988776
Q ss_pred C
Q psy5692 79 G 79 (98)
Q Consensus 79 ~ 79 (98)
.
T Consensus 267 ~ 267 (363)
T 1wio_A 267 A 267 (363)
T ss_dssp C
T ss_pred C
Confidence 4
No 304
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=94.22 E-value=0.023 Score=41.05 Aligned_cols=61 Identities=21% Similarity=0.152 Sum_probs=40.9
Q ss_pred EeeeeceeecCeEEEEccCCCCccc--eeEEeEEccCCeeeecCcCCCceEEEccCc----cEEEEeEeeecC
Q psy5692 13 VNYEHNVILGNTAVLRCQIPSYMSE--YIIVTSWIQDDVNIYLNTDTGGKYVVLSSG----DLYVQIRLSITG 79 (98)
Q Consensus 13 V~d~~~VirGNtAVLkC~IPs~V~d--~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG----eL~Ir~v~~~~~ 79 (98)
..+. .|..|.+|+|.|.+...... ---...|..++..| | ++++..+.+| .|.|++++..|.
T Consensus 7 p~~~-~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l-~----~~~~~~~~~~~~~~~L~i~~~~~~d~ 73 (313)
T 2d9q_B 7 VSAP-IVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQ-P----GGRQQRLSDGTQESIITLPHLNHTQA 73 (313)
T ss_dssp ESCS-EECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBC-T----TCEECCCSSSCCCEEEEESCCCSSEE
T ss_pred CCCc-EEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEEC-C----ccceEEEecCeEEEEEEEeccCCCcc
Confidence 4454 67899999999997643111 12335799998765 4 3566666655 599999887653
No 305
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=94.21 E-value=0.026 Score=42.25 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=40.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e----eeecC---------cCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V----NIYLN---------TDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~----~I~p~---------~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.++..... .....|++++ . .++.. ....+||.+..+ +.|.|++++.+
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (434)
T 1igy_B 10 LARPGASVKMSCKASGYTFT-TYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSD 88 (434)
T ss_dssp EECTBCCEEECCEECSSCGG-GCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGG
T ss_pred EecCCCCEEEEEEccCCccc-CceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChH
Confidence 56789999999998754211 2337898763 1 11211 113689998753 47999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 89 D~ 90 (434)
T 1igy_B 89 DS 90 (434)
T ss_dssp GC
T ss_pred HC
Confidence 75
No 306
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=94.20 E-value=0.029 Score=38.06 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=39.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc----CCCceEEEcc-----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT----DTGGKYVVLS-----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~----~~dgKY~vlp-----sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-. ....|.+++ ..| +... ..++||.+.. ++.|.|++++.+|.
T Consensus 138 ~v~~G~~v~L~C~~~~~p~---~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 211 (238)
T 2p1y_A 138 TVWEGETAILNCSYENSAF---DYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 211 (238)
T ss_dssp EEETTSCEEEEEECCCTTC---CEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGC
T ss_pred EEeCCCeEEEEEEEecCCC---CcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHC
Confidence 4678999999999865543 357898863 112 2111 1257888863 36899999998774
No 307
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=94.20 E-value=0.0035 Score=42.60 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=31.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---cEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+...-.. ...|.+++ . .+|.. ....+||.+.++| .|.|++++.+|. ..-
T Consensus 34 ~v~~G~~v~L~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~--G~Y 108 (233)
T 3bqu_C 34 SMSIGEKVTIRCITSTDIDD---DMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDV--ADY 108 (233)
T ss_dssp -------CCEEEEEEEEESS---CEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCC--SEE
T ss_pred EEecCCCEEEEEecCCcCCC---eEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHC--EEE
Confidence 47899999999997543222 36898753 1 12211 1235688777555 799999998875 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 109 ~C~~ 112 (233)
T 3bqu_C 109 YCLQ 112 (233)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4544
No 308
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=94.19 E-value=0.02 Score=35.63 Aligned_cols=68 Identities=9% Similarity=0.098 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e----eeecCc---CCCceEEEcc-----CccEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V----NIYLNT---DTGGKYVVLS-----SGDLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~----~I~p~~---~~dgKY~vlp-----sGeL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|.|.|.+.+.... ....|.+.. . .++-.. ...+||.+.. +..|.|++++.+|. ..
T Consensus 7 ~~~~G~~v~L~C~~~~~~~~--~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds--G~ 82 (110)
T 2q87_A 7 AGPVGGSLSVQCPYEKEHRT--LNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDA--GT 82 (110)
T ss_dssp EECTTSCEEEEEECCGGGTT--SEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGC--EE
T ss_pred EEeCCCcEEEEeEecCCcCC--ceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHC--EE
Confidence 46689999999998653322 258998864 1 122111 1357888862 23799999998763 44
Q ss_pred eeeeeh
Q psy5692 84 KKMKVE 89 (98)
Q Consensus 84 ~~~~~~ 89 (98)
=.|.+.
T Consensus 83 Y~C~~~ 88 (110)
T 2q87_A 83 YWCGVD 88 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 455544
No 309
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=94.18 E-value=0.035 Score=34.91 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=32.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc-cCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-SSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-psGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|..+... ....|.+++..+.+ +++... .+..|.|.+|+.+|
T Consensus 15 ~v~~G~~VtL~C~~~~~~----~~~~w~k~g~~~~~-----~~~~~~~~~~~l~I~~v~~~d 67 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPRMA----AWVQLWLNGTLRFD-----KEKDKEQDAAEFSFAVTNLED 67 (105)
T ss_dssp SCCTTCEEEEEEECCSSC----EEEEEEETTEEEEE-----EEECTTCSEEEEEEECCSGGG
T ss_pred CcCcCCCEEEEEEcCCCC----cEEEEEECCcccee-----eeccCCCCEEEEEECCCCHHH
Confidence 578999999999986542 23469998854432 121111 23467777776665
No 310
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=94.18 E-value=0.0053 Score=38.72 Aligned_cols=57 Identities=19% Similarity=0.295 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc--c--C---ccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL--S--S---GDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl--p--s---GeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+..+-.. ....|.+++..|.+. .++||.+. + . ..|.|++++.+|
T Consensus 24 ~~~~G~~v~l~C~~~g~P~p--~~i~W~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (122)
T 2cry_A 24 HALHGEKGQIKCFIRSTPPP--DRIAWSWKENVLESG--TSGRYTVETISTEEGVISTLTISNIVRAD 87 (122)
T ss_dssp CCCTTSCCCCCEEECCSSCC--SEEEEESSSCEECSE--EETTEEEEEEEETTEEEEEEECTTCCHHH
T ss_pred EEecCCCEEEEEEEeecCCC--cEeEEEECCEEccCC--CCCCEEEEEecCCCceEEEEEEcCCChhh
Confidence 67899999999998644332 125799998766432 24788773 2 2 279999998877
No 311
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=94.16 E-value=0.036 Score=37.77 Aligned_cols=68 Identities=12% Similarity=0.077 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc--------CCCceEEEcc--C---ccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT--------DTGGKYVVLS--S---GDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~--------~~dgKY~vlp--s---GeL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+..+-.. .....|.+++ . .+|-.. ...|||.+.. + +.|.|++++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 11 LVQPSQTLSLTCTVSGFPLT-TNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp EECTTCCEEEEEEECSSCTT-SCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eecCCCcEEEEEEECCCcCC-CCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 56689999999998654211 1346898752 1 122111 2358999874 2 379999999877
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ..-.|.+
T Consensus 90 ~--G~Y~C~~ 97 (215)
T 1c5d_H 90 T--AIYFCTR 97 (215)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 4444444
No 312
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=94.14 E-value=0.062 Score=38.71 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=39.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-.. ..+|.+++..+.+ +.......++.|.|.+++.+|+
T Consensus 233 ~~~~G~~v~l~C~~~g~p~~---~v~W~~~~~~~~~----~~~~~~~~~~~L~i~~~~~~d~ 287 (404)
T 3p3y_A 233 MVLRGMDLLLECIASGVPTP---DIAWYKKGGDLPS----DKAKFENFNKALRITNVSEEDS 287 (404)
T ss_dssp EEETTSCEEEECCBCCSSCC---EEEEEETTBCCCT----TTEEEEGGGTEEEESSCCGGGC
T ss_pred eEecCCCEEEEEEECCCCCC---cEEEEECCEECCC----CcccccccCceEEEccCCHhHC
Confidence 47789999999998654332 5789999866533 3344445678888888877663
No 313
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=94.12 E-value=0.0084 Score=40.07 Aligned_cols=55 Identities=13% Similarity=0.033 Sum_probs=33.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|.+..... -..|.+++..+.+.. ........++.|.|.+++..|
T Consensus 15 ~v~~G~~v~L~C~~~~~~~----~~~W~k~g~~~~~~~--~~~~~~~~~~~L~i~~v~~~D 69 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ----EYRLYREKKTAPWIT--RIPQELVKKGQFPIPSITWEH 69 (198)
T ss_dssp EEETTCCEEEEEECCTTCC----CEEEEESSSCCHHHH--TSCHHHHTTTEEEESSCCGGG
T ss_pred cccCCCcEEEEEEecCCCc----EEEEEECCccccccc--cccccCCcccEEEECCCCHHH
Confidence 6779999999999865543 378999885542211 011112345666666665554
No 314
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=94.06 E-value=0.033 Score=40.99 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=40.4
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccCC--e---ee-ec----CcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQDD--V---NI-YL----NTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~Dd--~---~I-~p----~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...... -.....|.+++ . .+ +. .....+||.+..+| .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (438)
T 1qgc_4 12 AVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDV 87 (438)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCC
Confidence 46689999999997644331 11357899863 1 11 11 11235799887543 699999998875
No 315
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=94.05 E-value=0.02 Score=39.74 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=39.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...-. ....|.+++ ..++.. ...++||.+.+++ .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 12 SVTPGNSVSLSCRASQSIG---NNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EECTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEcCCCcEEEEEEeCCCCC---ceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 4668999999999764432 246898742 122221 1236899987544 699999998774
No 316
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=94.04 E-value=0.078 Score=35.93 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=41.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEcc---CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVLS---SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.++.|.|.+...... ...|.+.. ..++... ...+||.+.+ +..|.|++++.+|. +.-
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~---~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~Ds--G~Y 85 (143)
T 3u6r_L 11 SLSPGERATLSCRASQSVNK---YLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDF--AVY 85 (143)
T ss_dssp EECTTCCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC--EEE
T ss_pred EEeCCCCEEEEEEECCCCce---eeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCC--EEE
Confidence 34489999999998765422 35898742 2333211 2367898864 33599999998874 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 86 ~C~~ 89 (143)
T 3u6r_L 86 YCQQ 89 (143)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 317
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=94.02 E-value=0.031 Score=39.04 Aligned_cols=61 Identities=15% Similarity=0.104 Sum_probs=35.1
Q ss_pred ceeecCeEEEEccCCC-CccceeEEeEEccCC----eeee---------cCcCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPS-YMSEYIIVTSWIQDD----VNIY---------LNTDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs-~V~d~V~V~SW~~Dd----~~I~---------p~~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
-++.|.+|+|.|.+.. .-..-. ..+|+++. ..++ ......++|.+.. ++.|.|++++.+|.
T Consensus 4 ta~~Ge~v~L~C~~~~v~~~p~~-~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 4 TAFLGERVTLTSYWRRVSLGPEI-EVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp EEETTCCEEEEEECSSTTCSTTS-EEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCCEEEEeeeeccCCCCCc-EEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 3678999999995421 111222 35899864 1111 1112345666644 34589999888774
No 318
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=93.98 E-value=0.025 Score=36.51 Aligned_cols=52 Identities=10% Similarity=0.073 Sum_probs=36.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC---ccEEEEeEee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS---GDLYVQIRLS 76 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps---GeL~Ir~v~~ 76 (98)
.+..|.++.|.|.+..+-.. ..+|.+++..|.+ +.++.+..+ +.|.|.++..
T Consensus 114 ~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~ 168 (197)
T 3lcy_A 114 YGAVGSTLRLHVMYIGRPVP---AMTWFHGQKLLQN----SENITIENTEHYTHLVMKNVQR 168 (197)
T ss_dssp EEETTSCEEEEEEEEEESCC---EEEEEETTEECCC----CSSEEEEECSSEEEEEESSCCH
T ss_pred eecCCCeEEEEEEEeeeeCC---eeEEeECCEECCC----CCceEEEEcCCEEEEEEccccc
Confidence 45679999999997543322 4789999876643 567776654 6788888763
No 319
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=93.97 E-value=0.02 Score=38.09 Aligned_cols=66 Identities=12% Similarity=0.145 Sum_probs=41.4
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
++.|.++.|.|.+..+-.. -...+|.+++..|.+. .+.+|+|.+ ++.|.|++++..|+ ..-.|.++
T Consensus 124 ~~~g~~~~l~C~~~g~~p~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~--G~Y~C~a~ 197 (213)
T 3d9a_L 124 QLTSGGASVVCFLNNFYPK-DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH--NSYTCEAT 197 (213)
T ss_dssp HHHTTEEEEEEEEEEEBSS-CCEEEEEETTEEECTTEEEEECCCCTTTCCEEE--EEEEEEEHHHHHHC--CEEEEEEE
T ss_pred hcCCCcEEEEEEEeeecCC-ceEEEEEcCCCcCcceeeecCCCccCCCCCEEE--EEEEEEeccccCCC--CEEEEEEE
Confidence 4579999999998532111 1247899998766443 134566654 45788888876654 34455543
No 320
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=93.97 E-value=0.076 Score=33.78 Aligned_cols=68 Identities=19% Similarity=0.172 Sum_probs=42.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e------eeecCcC-------C-CceEEEccCc---cEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V------NIYLNTD-------T-GGKYVVLSSG---DLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~------~I~p~~~-------~-dgKY~vlpsG---eL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|...+.... ....|.+.. . .|+-... . .+||.+..++ -|.|++++.+|
T Consensus 11 ~v~~G~~vtL~C~~~~~~~~--~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~D 88 (114)
T 2hp4_A 11 TWNLGETVELKCQVLLSNPT--SGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRREN 88 (114)
T ss_dssp CCCTTCCEEEEEEECCSSCC--SCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEcCCCCEEEEEEeecCCCC--ceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEECCCCHHH
Confidence 45689999999997644322 236897631 2 2332211 1 4788876544 59999999877
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ++=-|.+.
T Consensus 89 s--g~Y~C~~~ 97 (114)
T 2hp4_A 89 E--GYYFCSAL 97 (114)
T ss_dssp C--EEEEEEEE
T ss_pred C--EEEEEEEe
Confidence 4 44455543
No 321
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=93.97 E-value=0.035 Score=39.72 Aligned_cols=68 Identities=6% Similarity=0.112 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+++|.|.+.++-... ....|++.. ..+ +-. ....|||.+..++. |.|++++.+
T Consensus 34 ~~~~G~~v~L~C~~s~~~~~~-~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 112 (267)
T 3u1s_H 34 VKKPGSSVKVSCKASGNSFSN-HDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTAD 112 (267)
T ss_dssp EECTTCCEEEEEEEGGGGGGT-SEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEeeCCccCC-CEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCChh
Confidence 567899999999986432222 456787642 122 211 12358999875544 999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.--|.+
T Consensus 113 Ds--G~Y~C~~ 121 (267)
T 3u1s_H 113 DT--AIYYCLT 121 (267)
T ss_dssp GC--EEEEEEE
T ss_pred hC--EEEEEEE
Confidence 74 4444444
No 322
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=93.93 E-value=0.049 Score=38.07 Aligned_cols=58 Identities=21% Similarity=0.164 Sum_probs=39.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc-------CCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT-------DTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~-------~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+.. . .....|+++. . .+|... ...+||.+.. ++.|.|++++.+|.
T Consensus 14 ~v~~G~~v~L~C~~~~---~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~ 88 (252)
T 1oga_E 14 FRKEGQNVTLSCEQNL---N-HDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPT 88 (252)
T ss_dssp EEETTCCEEECCEECS---C-CSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCC
T ss_pred EEcCCCcEEEEEEeCC---C-CCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhC
Confidence 4568999999999742 1 3457898753 1 222211 2358999874 46899999998873
No 323
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=93.90 E-value=0.074 Score=37.88 Aligned_cols=67 Identities=15% Similarity=0.190 Sum_probs=43.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----eeeecCc-CCCceEEEcc--------CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----VNIYLNT-DTGGKYVVLS--------SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~~I~p~~-~~dgKY~vlp--------sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.+++|.|.+...-.. ....|.+++ ..|+... ...+|+.+++ ++.|.|++++.+|. ..-
T Consensus 14 ~v~~G~~v~L~C~~~~~~p~--~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~--G~Y 89 (327)
T 2wng_A 14 SVAAGESAILHCTVTSLIPV--GPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADA--GTY 89 (327)
T ss_dssp EEETTSCEEECCEESCCCSC--CCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGC--EEE
T ss_pred EEecCCcEEEEEEccCcCCC--ceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccC--eEE
Confidence 56789999999998654211 246899986 2344321 2345887743 46799999987774 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 90 ~C~a 93 (327)
T 2wng_A 90 YCVK 93 (327)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 324
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=93.86 E-value=0.065 Score=38.28 Aligned_cols=53 Identities=8% Similarity=0.078 Sum_probs=35.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|..... .. ...|.+|+..+.+ .......++.|.|.+|+.+|.
T Consensus 112 ~v~~G~~vtL~C~~~~~---~~-~~~w~k~g~~~~~-----~~~~~~~~~~l~I~~v~~~d~ 164 (242)
T 1p6f_A 112 EVISGEKVTFYCRLDTA---TS-MFLLLKEGRSSHV-----QRGYGKVQAEFPLGPVTTAHR 164 (242)
T ss_dssp EEETTCEEEEEEECTTS---CS-EEEEEECSSSCEE-----EEEECSSEEEEEEEECCGGGC
T ss_pred ccCCCCcEEEEEecCCC---CC-EEEEEECCCccCc-----cccCCCceEEEEeCCCccccC
Confidence 67899999999997532 22 5689999854432 111223567888888877664
No 325
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=93.85 E-value=0.079 Score=34.07 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=40.0
Q ss_pred ceeecCeEEEEccCCCCcc-ceeEEeEEccCC------eeeecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS-EYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~-d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+..... .-.....|.+.. ..++.. ....+||.+.+++ .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~Ds 87 (126)
T 4ffy_L 12 AVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDA 87 (126)
T ss_dssp EEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHC
Confidence 4558999999999875431 013456898742 233321 1235788887533 599999998874
No 326
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=93.81 E-value=0.033 Score=39.67 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=43.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee---ecC-------cCCCceEEEccCcc-----EEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI---YLN-------TDTGGKYVVLSSGD-----LYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I---~p~-------~~~dgKY~vlpsGe-----L~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+..+-... ....|++.. ..| ++. ....|||.+..++. |.|++++.+
T Consensus 10 ~v~~G~~v~L~C~~s~~~~~~-~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (248)
T 3u2s_H 10 VVQPGSSLRLSCAASGFDFSR-QGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVE 88 (248)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEeCCCCEEEEEEeccccCCc-cEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHH
Confidence 567899999999986532222 245787632 112 111 12358999876443 999999988
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. +.--|.+.
T Consensus 89 Ds--G~Y~C~~~ 98 (248)
T 3u2s_H 89 DT--ATYFCVRE 98 (248)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEe
Confidence 85 55556553
No 327
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=93.80 E-value=0.053 Score=40.00 Aligned_cols=60 Identities=10% Similarity=0.220 Sum_probs=42.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCCcceeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMK 87 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~ 87 (98)
.+..|.++.|.|.+...-. -..+|++++..|.+ ++++.+ .+|.|.|++++.+|. ..-.|.
T Consensus 306 ~v~~g~~v~l~C~~~g~P~---p~i~W~k~g~~l~~----~~~~~~-~~~~L~i~~v~~~D~--G~Y~C~ 365 (384)
T 3kld_A 306 HVAMEESVFWECKANGRPK---PTYRWLKNGDPLLT----RDRIQI-EQGTLNITIVNLSDA--GMYQCV 365 (384)
T ss_dssp EECTTCCEEEECEEEEESC---CEEEEEETTEECCC----BTTEEE-ETTEEEESSCCGGGC--EEEEEE
T ss_pred EecCCCCEEEEeECCccCC---CeEEEEECCEECCC----CccEEE-eCCEEEEeecChhhC--EEEEEE
Confidence 5678999999999743222 23579999977644 456664 688999999987763 334444
No 328
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=93.79 E-value=0.033 Score=39.18 Aligned_cols=62 Identities=18% Similarity=0.211 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccc--eeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE--YIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d--~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...-.. --....|.+++ . .++.. ...++||.+..++ .|.|++++.+|.
T Consensus 26 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 102 (268)
T 1x9q_A 26 PVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDL 102 (268)
T ss_dssp CCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHC
Confidence 57799999999997544310 01346798753 1 22211 1136899987543 799999998774
No 329
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=93.77 E-value=0.025 Score=40.55 Aligned_cols=61 Identities=10% Similarity=0.096 Sum_probs=38.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC---------cCCCceEEEccCc-----cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN---------TDTGGKYVVLSSG-----DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~---------~~~dgKY~vlpsG-----eL~Ir~v~~~ 77 (98)
.|..|.+++|.|.+..+-.. .....|++.. ..++-. ....+||.+..++ .|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (280)
T 3fku_X 11 VKKPGSSVKVSCTSSEVTFS-SFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSE 89 (280)
T ss_dssp EECTTCCEEEEEEECCSCCT-TSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCST
T ss_pred EECCCCcEEEEEEeeccCCC-CeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 46689999999998653111 1246787632 111111 1134799988543 6999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 90 Ds 91 (280)
T 3fku_X 90 DT 91 (280)
T ss_dssp TC
T ss_pred hC
Confidence 74
No 330
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=93.76 E-value=0.032 Score=42.03 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=43.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--cC-------cCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--LN-------TDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p~-------~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.++.+-.. .....|++++ ..+ + +. ....|||.+..+ +.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (457)
T 1hzh_H 11 VKKPGASVKVSCQASGYRFS-NFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSA 89 (457)
T ss_dssp EECTTCCEEECEEEESSCGG-GSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEecCcccc-CcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcc
Confidence 46689999999998654311 1236898742 112 1 11 124689998753 37999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 90 D~--G~Y~C~~ 98 (457)
T 1hzh_H 90 DT--AVYYCAR 98 (457)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 75 3444544
No 331
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=93.75 E-value=0.04 Score=38.29 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=39.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C--e-eeecC----cCCCceEEEccCcc---EEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D--V-NIYLN----TDTGGKYVVLSSGD---LYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d--~-~I~p~----~~~dgKY~vlpsGe---L~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...... ....|.+. . . .++.. ....+||.+..+|. |.|++++.+|.
T Consensus 160 ~v~~G~~v~L~C~~~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 232 (256)
T 3juy_B 160 SLSPGERATFSCRSSHSIRS--RRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDF 232 (256)
T ss_dssp EECTTSCEEEEEEESSCCTT--CCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEEEECCCcCC--eeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHC
Confidence 56789999999998653321 34678762 2 2 22221 11357898876655 99999998874
No 332
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=93.74 E-value=0.12 Score=40.52 Aligned_cols=62 Identities=8% Similarity=0.084 Sum_probs=45.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc-CccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS-SGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp-sGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.+..|.++.|.|.++. . .....|.+++..|.+ ++|+.+.+ ++.|.|.+++..|. ..-.|.+.
T Consensus 122 ~v~~g~~v~l~C~~~~---p-~~~v~W~~~g~~l~~----~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~a~ 184 (642)
T 1e07_A 122 PVEDKDAVAFTCEPET---Q-DATYLWWVNNQSLPV----SPRLQLSNGNRTLTLFNVTRNDT--ASYKCETQ 184 (642)
T ss_pred eEecCCcEEEEEECCC---C-CeeEEEEECCeECCC----CCceEEcCCCCEEEEeCCCcccC--eeEEEEEe
Confidence 4567899999999875 2 355679999876633 56887764 77899999988775 34566654
No 333
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=93.74 E-value=0.086 Score=36.79 Aligned_cols=59 Identities=17% Similarity=0.205 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc--CCe---e-eecC----cCCCceEEEccC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ--DDV---N-IYLN----TDTGGKYVVLSS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~--Dd~---~-I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-.. ...|.+ +.. . ++.. ....+||.+..+ +.|.|++++.+|.
T Consensus 150 ~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 221 (257)
T 1f3r_B 150 SASVGDRVTLSCKGSQNINN---YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDV 221 (257)
T ss_dssp CCCTTCCEEEEEECSSCCBT---CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGC
T ss_pred EEcCCCCEEEEEEECCcCCC---cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhC
Confidence 46789999999998655443 468998 432 1 2221 123578988653 3699999998874
No 334
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=93.74 E-value=0.044 Score=37.60 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=39.4
Q ss_pred ceeecCeEEEEccCCCCcc-c-eeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS-E-YIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~-d-~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...-. + -.....|.+++ . .++.. ....+||.+..++ .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 88 (247)
T 1svz_A 12 PVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (247)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHC
Confidence 4668999999999754331 0 02346898742 1 22211 1136899987644 699999998764
No 335
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=93.72 E-value=0.092 Score=34.31 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=34.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+...-.. ....|.+++..+-.. ..++.|.|.+++.+|
T Consensus 99 ~~~~g~~~~l~C~~~~~~~~--~~~~W~k~g~~~~~~---------~~~~~L~i~~v~~~d 148 (175)
T 1fnl_A 99 VFKEEDPIHLRCHSWKNTAL--HKVTYLQNGKDRKYF---------HHNSDFHIPKATLKD 148 (175)
T ss_dssp EEETTCCEEEEEEECTTCCC--EEEEEEETTEEEEEE---------EECCCEEESSCCGGG
T ss_pred eecCCCCEEEEEEcCCCCCc--eEEEEEECCeEccCC---------CCCCEEEEcccChhh
Confidence 56789999999987543222 467899998665321 135677777776665
No 336
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=93.71 E-value=0.044 Score=38.09 Aligned_cols=69 Identities=14% Similarity=0.039 Sum_probs=43.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC--------cCCCceEEEcc--Cc---cEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN--------TDTGGKYVVLS--SG---DLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~--------~~~dgKY~vlp--sG---eL~Ir~v~~~~ 78 (98)
.|..|.+|+|.|.+..+-.. .....|++.+ . .++-. ....|||.+.. ++ .|.|++++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 11 LLKPSETLSLTCAVYGGSFS-DYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp EECTTSCEEEEEEEESSCCS-SCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEEccccCC-CceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence 56689999999997543211 1347898743 1 22211 12368999874 22 79999999877
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ..-.|.+.
T Consensus 90 ~--G~Y~C~~~ 98 (232)
T 1dn0_B 90 T--AVYYCARP 98 (232)
T ss_dssp C--EEEEEEEC
T ss_pred C--EEEEEEEe
Confidence 5 44445443
No 337
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=93.70 E-value=0.039 Score=34.88 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=41.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC-c----CCCceEEEc--cC---ccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN-T----DTGGKYVVL--SS---GDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~-~----~~dgKY~vl--ps---GeL~Ir~v~~~~~n~ 81 (98)
.|..|.+|+|.|.+.+...+ ....|.+.. ..++-. . ...+||.+. ++ .-|.|++++.+|.
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~--~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds-- 86 (116)
T 1fo0_A 11 SVMEKTTVTMDCVYETQDSS--YFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDS-- 86 (116)
T ss_dssp EEETTCCEEECCEECCCCSS--CEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGC--
T ss_pred EEecCCcEEEEeEecCCCCC--eEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhC--
Confidence 34589999999998654322 247898753 122221 1 125799884 33 2599999998764
Q ss_pred ceeeeeeh
Q psy5692 82 SVKKMKVE 89 (98)
Q Consensus 82 ~~~~~~~~ 89 (98)
+.=-|.+.
T Consensus 87 G~Y~C~~~ 94 (116)
T 1fo0_A 87 AVYFCAMR 94 (116)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 44445443
No 338
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=93.67 E-value=0.047 Score=34.16 Aligned_cols=67 Identities=9% Similarity=0.005 Sum_probs=41.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCcC----CCceEEEc--c---CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNTD----TGGKYVVL--S---SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~~----~dgKY~vl--p---sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+++|.|.+...-. ....|.+.. . .++-... ..+||.+. + +.-|.|++++.+|. +
T Consensus 11 ~~~~G~~v~L~C~~~~~~~---~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds--G 85 (112)
T 2z35_A 11 ALSEEDFLTIHCNYSASGY---PALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDS--A 85 (112)
T ss_dssp EEETTCCEEECCEEECSSC---CEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTC--S
T ss_pred EEcCCCCEEEEEEECCCCC---CeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhC--E
Confidence 3458999999999865522 246898753 1 2222111 24788884 3 34699999988763 4
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
.=-|.+.
T Consensus 86 ~Y~C~~~ 92 (112)
T 2z35_A 86 VYYCALS 92 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 339
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=93.65 E-value=0.02 Score=41.29 Aligned_cols=59 Identities=17% Similarity=0.154 Sum_probs=39.2
Q ss_pred ceeecCeEEEEccCCCCc--cceeEEeEEccCCeeeecCcCCCceEEEc-------cCccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYM--SEYIIVTSWIQDDVNIYLNTDTGGKYVVL-------SSGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V--~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-------psGeL~Ir~v~~~~~n 80 (98)
.+..|.++.|.|.+...- ...+ ...|.+++..|.+. +.+.... .++.|.|.+++.+|.-
T Consensus 239 ~v~~G~~~~l~C~~~g~p~~~~~i-~v~W~~~g~~i~~~---~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 306 (329)
T 3oq3_B 239 NVTIGEPANITCTAVSTSLLVDDV-LIDWENPSGWIIGL---DFGVYSILTSSGGITEATLYFENVTEEYIG 306 (329)
T ss_dssp EECTTSCEEEEEEEEETTCCTTCC-EEEEECTTSCBCCB---CSSEEEEEEEETTEEEEEEEESSCCGGGTT
T ss_pred EEecCCCEEEEEEEEECCCCCCCc-EEEEEECCeeeecc---CCceeeeecccCceeEeEEEEEeccHHHCC
Confidence 567899999999986543 1222 56899998665552 2222221 5678999988887753
No 340
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=93.64 E-value=0.055 Score=37.47 Aligned_cols=62 Identities=18% Similarity=0.236 Sum_probs=39.6
Q ss_pred ceeecCeEEEEccCCCCccc-eeEEeEEccC---C---eeeecCc----CCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-YIIVTSWIQD---D---VNIYLNT----DTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~V~V~SW~~D---d---~~I~p~~----~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...... .-....|.+. . ..++... ...+||.+.+++ .|.|++++.+|.
T Consensus 144 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 219 (253)
T 3uzq_A 144 AVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDV 219 (253)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHC
Confidence 67899999999998653221 0025789873 2 1223211 134788876644 499999998874
No 341
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=93.64 E-value=0.02 Score=40.93 Aligned_cols=55 Identities=9% Similarity=-0.065 Sum_probs=32.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|..+.. .....|.+++..+.... .+......+|.|.|.+++..|
T Consensus 17 ~v~~G~~VtL~C~~~~~----~~~~~w~k~g~~~~~~~--~~~~~~~~~~~L~I~~v~~~D 71 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNYG----AVEYQLHFEGSLFAVDR--PKPPERINKVKFYIPDMNSRM 71 (242)
T ss_dssp EEETTCCEEEEEECCTT----CCEEEEEETTEEEEEEC--CSSCTTCCEEEEEECSCCGGG
T ss_pred ccCCCCcEEEEEeeCCC----CcEEEEEECCCcccccc--ccccCCcceeEEEecCCCccc
Confidence 57889999999998643 23467999985543210 011111235566666665544
No 342
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=93.62 E-value=0.068 Score=35.00 Aligned_cols=77 Identities=19% Similarity=0.113 Sum_probs=46.4
Q ss_pred ceeeeceEEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc----CCCceEEEcc---CccE
Q psy5692 3 PVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT----DTGGKYVVLS---SGDL 69 (98)
Q Consensus 3 AVV~Q~Yev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~----~~dgKY~vlp---sGeL 69 (98)
.||.|+= .+ .|..|.++.|.|.+.+.-... ....|.+.. . .|+... ...+||.+.. +..|
T Consensus 2 p~v~Qp~--~v----~v~~G~~vtL~C~~s~~~~~~-~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL 74 (123)
T 3t0v_A 2 PVLTQSP--SV----SGTPGQKVTIFCSGSSSNVED-NSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASL 74 (123)
T ss_dssp CSBEECC--CE----EECTTCCEEEEEECCTTTTTT-SCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred CccCccC--eE----EEcCCCCEEEEEecCCCccCC-CeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEE
Confidence 3677762 22 455899999999987553111 346788742 2 333211 1357888764 4469
Q ss_pred EEEeEeeecCCcceeeeee
Q psy5692 70 YVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 70 ~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|++++.+|. +.--|.+
T Consensus 75 ~I~~l~~~Ds--G~Y~C~~ 91 (123)
T 3t0v_A 75 AISGLRSEDE--ADYYCLS 91 (123)
T ss_dssp EECSCCGGGC--EEEEEEE
T ss_pred EECCCCHHHC--EEEEEEE
Confidence 9999998774 4444443
No 343
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=93.60 E-value=0.077 Score=34.69 Aligned_cols=54 Identities=20% Similarity=0.343 Sum_probs=36.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcC-CCceEEEccCccEEEEeE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTD-TGGKYVVLSSGDLYVQIR 74 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~-~dgKY~vlpsGeL~Ir~v 74 (98)
.+..|.++.|.|.+...-. ....|.+++..+..... ...+...+++|.|++..+
T Consensus 20 ~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 74 (212)
T 2v9r_A 20 IVSKGEPATLNCKAEGRPT---PTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRI 74 (212)
T ss_dssp EECTTCCEEECCEEEEESC---CEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSC
T ss_pred EEeCCCcEEEEEEcCCCCC---CEEEEEECCEEeeccccccccceEEecCCcEEEEEE
Confidence 6778999999999743222 25789999866644322 233566678888877554
No 344
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=93.59 E-value=0.076 Score=34.53 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=40.8
Q ss_pred eeecCeEEEEccCCCC--ccceeEEeEEccCC------eeee--cCc------CCCceEEEc--cC---ccEEEEeEeee
Q psy5692 19 VILGNTAVLRCQIPSY--MSEYIIVTSWIQDD------VNIY--LNT------DTGGKYVVL--SS---GDLYVQIRLSI 77 (98)
Q Consensus 19 VirGNtAVLkC~IPs~--V~d~V~V~SW~~Dd------~~I~--p~~------~~dgKY~vl--ps---GeL~Ir~v~~~ 77 (98)
|..|.++.|.|.+.+. ... ....|.+.. ..++ ... ...+||.+. ++ .-|.|++++.+
T Consensus 12 v~~G~~vtL~C~~s~~~~~~~--~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 89 (126)
T 2h32_A 12 SALGTTIRLTCTLRNDHDIGV--YSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPE 89 (126)
T ss_dssp EETTCCEEEEEEECTTSCGGG--CEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred ECCCCCEEEEEEecCCCcccc--ceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCCChh
Confidence 4489999999998654 222 346898743 2233 111 125799887 43 35999999887
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ++=-|.+
T Consensus 90 Ds--G~Y~C~~ 98 (126)
T 2h32_A 90 DE--AMYYCAM 98 (126)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 74 3444443
No 345
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=93.58 E-value=0.0082 Score=40.89 Aligned_cols=57 Identities=14% Similarity=0.235 Sum_probs=35.7
Q ss_pred eeecCeEEEEccCCCCc--cceeEEeEEccCCeeeecC------cCCCceEEEccCccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYM--SEYIIVTSWIQDDVNIYLN------TDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V--~d~V~V~SW~~Dd~~I~p~------~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
|..|.+|.|.|.+..+- .. ....+|.+++..+... ...+|+|.. ++.|.|.+++..|
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~~~~~D 79 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDP-EVQFSWFVDDVEVHTAQTKPREEQFNSTFRS--VSELPIMHQDWLN 79 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCC-CCEEEEEETTEEECCCEEECCCEETTTEEEE--EEEEECCHHHHHT
T ss_pred hccCCceEEEEEEeCcccCCC-ceEEEEEECCccccccccCCCcCcCCCcEEE--EEEEEEehhHcCC
Confidence 77999999999986331 11 1257899998544211 113567643 4567777666554
No 346
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=93.49 E-value=0.1 Score=34.03 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=25.6
Q ss_pred EEeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeee
Q psy5692 12 NVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI 51 (98)
Q Consensus 12 ~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I 51 (98)
..... .+..|.++.|.|.+.+.-. ....+|.+++..+
T Consensus 91 ~~~~~-~~~~g~~~~l~C~~~~~~p--~~~~~W~~~g~~~ 127 (176)
T 1f2q_A 91 QASAE-VVMEGQPLFLRCHGWRNWD--VYKVIYYKDGEAL 127 (176)
T ss_dssp EESCS-EEETTSCEEEEEEEGGGCC--EEEEEEEETTEEC
T ss_pred cCCcc-eeeCCCCEEEEEEecCCCC--ceEEEEEECCEEE
Confidence 33444 6789999999999742211 2467899998665
No 347
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=93.48 E-value=0.054 Score=37.13 Aligned_cols=62 Identities=18% Similarity=0.319 Sum_probs=37.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-------eee-e--------c--CcCCCceEEE-----ccCccEEEEeE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-------VNI-Y--------L--NTDTGGKYVV-----LSSGDLYVQIR 74 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-------~~I-~--------p--~~~~dgKY~v-----lpsGeL~Ir~v 74 (98)
.+..|.++.|.|.+.+.-..-....+|.+++ ..+ + + .....+|..+ ..++.|.|.++
T Consensus 129 ~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v 208 (268)
T 3mj6_A 129 RVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTV 208 (268)
T ss_dssp EEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSC
T ss_pred ccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcC
Confidence 5779999999999832212223356899842 111 1 1 1112234444 45788999998
Q ss_pred eeecC
Q psy5692 75 LSITG 79 (98)
Q Consensus 75 ~~~~~ 79 (98)
+.+|.
T Consensus 209 ~~~D~ 213 (268)
T 3mj6_A 209 KESDQ 213 (268)
T ss_dssp CGGGC
T ss_pred ChhhC
Confidence 87775
No 348
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=93.47 E-value=0.084 Score=35.97 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=39.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC----cCCCceEEEccC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+.+.... ...|++.. ..+|.. ....+||.+.++ ..|.|++++.+|.
T Consensus 27 ~v~~G~sVtL~C~~s~~~~~---~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~Ds 98 (146)
T 2yc1_B 27 SVSPGERATLSCRASQSVRS---YLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDF 98 (146)
T ss_dssp EECTTSCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEecCCCEEEEEEECCCCCC---EEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHC
Confidence 35589999999998655433 35898753 223321 123579988653 4699999998764
No 349
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=93.44 E-value=0.12 Score=34.46 Aligned_cols=77 Identities=17% Similarity=0.178 Sum_probs=45.8
Q ss_pred ceeeeceEEEEeeeeceeecCeEEEEccCCCCcc-ceeEEeEEccCC-----e-eeecC----cCCCceEEEccCc---c
Q psy5692 3 PVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMS-EYIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSSG---D 68 (98)
Q Consensus 3 AVV~Q~Yev~V~d~~~VirGNtAVLkC~IPs~V~-d~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlpsG---e 68 (98)
+.|.|+=. + .|..|.+++|.|.+.+... +. ....|++.. . .++-. ....+||.+..++ -
T Consensus 7 ~~v~q~~~--v----~v~~G~~vtL~C~~~~~~~~~~-~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~s 79 (135)
T 1p4b_L 7 AVVTQESA--L----TTSPGETVTLTCRSSTGAVTTS-NYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAA 79 (135)
T ss_dssp CCEECCSE--E----EECTTCEEEEEEEETTSSCCGG-GCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEE
T ss_pred eeEEECCc--E----EEcCCCCEEEEEEecCCCcCCC-CEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEE
Confidence 35666532 2 3448999999999865431 11 236887653 1 22211 1235799886533 6
Q ss_pred EEEEeEeeecCCcceeeeee
Q psy5692 69 LYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 69 L~Ir~v~~~~~n~~~~~~~~ 88 (98)
|.|++++.+|. ++=-|.+
T Consensus 80 L~I~~v~~~Ds--G~Y~C~~ 97 (135)
T 1p4b_L 80 LTITGAQTEDE--AIYFCAL 97 (135)
T ss_dssp EEEESCCGGGC--EEEEEEE
T ss_pred EEECCCChhHC--EEEEEEE
Confidence 99999998764 4444444
No 350
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=93.44 E-value=0.03 Score=37.40 Aligned_cols=66 Identities=12% Similarity=0.144 Sum_probs=38.8
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
++.|.++.|.|.+..+-.. -...+|.+|+..|.+. .+.+|.|.+. ..|.|.+++.+|+ ..-.|.++
T Consensus 123 ~~~g~~v~l~C~~~g~~p~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~--G~Y~C~a~ 196 (210)
T 1lk3_L 123 QLATGGASVVCLMNNFYPR-DISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMS--STLSLTKADYESH--NLYTCEVV 196 (210)
T ss_dssp HHTTTEEEEEEEEEEEBSS-CCEEEEEETTEECCTTEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTC--CEEEEEEE
T ss_pred hccCCcEEEEEEEEeEeCC-ceEEEEEeCCccCCCCceEccCCccCCCCCEEEE--EEEEEChHHhccC--CcEEEEEE
Confidence 4569999999997532111 1246899998666432 1245566442 3577777665543 33445543
No 351
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=93.42 E-value=0.037 Score=38.24 Aligned_cols=65 Identities=20% Similarity=0.205 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC-------cCCCceEEEcc----CccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN-------TDTGGKYVVLS----SGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~-------~~~dgKY~vlp----sGeL~Ir~v~~~~~n 80 (98)
.|..|.+|+|.|.+. . . .....|++++ ..+ +.. ....+||.+.. ++.|.|++++.+|.
T Consensus 10 ~v~~G~~v~L~C~~~-~--~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~- 84 (238)
T 1bec_A 10 VAVTGGKVTLSCQQT-N--N-HNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQT- 84 (238)
T ss_dssp EEETTCCEEEEEEES-S--C-CSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGC-
T ss_pred EEeCCCcEEEEEEeC-C--C-CceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccC-
Confidence 467899999999973 2 1 3457898753 112 111 12368888863 35799999998774
Q ss_pred cceeeeee
Q psy5692 81 LSVKKMKV 88 (98)
Q Consensus 81 ~~~~~~~~ 88 (98)
..-.|.+
T Consensus 85 -G~Y~C~~ 91 (238)
T 1bec_A 85 -SVYFCAS 91 (238)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEE
Confidence 3344444
No 352
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=93.37 E-value=0.066 Score=33.55 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=41.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc-------CCCceEEEcc-----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT-------DTGGKYVVLS-----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~-------~~dgKY~vlp-----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...... ....|.+.. ..| +-.. ...+||.+.. +..|.|++++.+|.
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~--~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 88 (116)
T 1tvd_A 11 TVASGSEVVLLCTYDTVYSN--PDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDS 88 (116)
T ss_dssp EEETTCCEEECCEEECCSSS--CCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGC
T ss_pred EEecCCeEEEEeEeEcCCCC--cEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHC
Confidence 35589999999997432222 236887653 122 2111 1268998752 23699999998774
Q ss_pred Ccceeeeeeh
Q psy5692 80 NLSVKKMKVE 89 (98)
Q Consensus 80 n~~~~~~~~~ 89 (98)
+.=-|.+.
T Consensus 89 --G~Y~C~~~ 96 (116)
T 1tvd_A 89 --ATYYCAFT 96 (116)
T ss_dssp --EEEEEEEE
T ss_pred --EEEEEEEe
Confidence 44455543
No 353
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=93.33 E-value=0.045 Score=37.06 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=24.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIY 52 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~ 52 (98)
.|..|.++.|.|.++..-.. ....|.+++..|.
T Consensus 12 ~v~~G~~v~l~C~~~~~~~~--~~~~W~~~g~~~~ 44 (262)
T 3rjd_A 12 SVFQEETVTLHCEVLHLPGS--SSTQWFLNGTATQ 44 (262)
T ss_dssp EEETTCCEEEEEECSSCCCT--TCEEEEETTEECS
T ss_pred EeeCCCeEEEEEECCCCCCC--ceEEEEECCEEee
Confidence 57799999999998654332 2457999886653
No 354
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=93.31 E-value=0.059 Score=38.23 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=40.4
Q ss_pred ceeecCeEEEEccCCCCccc---eeEEeEEccCC-----e-eeecC----cCCCceEEEccC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE---YIIVTSWIQDD-----V-NIYLN----TDTGGKYVVLSS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d---~V~V~SW~~Dd-----~-~I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...-.+ -.....|.+++ . .++.. ...++||.+..+ +.|.|++++.+|.
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 93 (264)
T 2gjj_A 16 PVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDL 93 (264)
T ss_dssp EEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHC
Confidence 46689999999997543310 13457898742 1 23321 123689998753 4899999998775
No 355
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=93.29 E-value=0.052 Score=37.80 Aligned_cols=46 Identities=15% Similarity=0.131 Sum_probs=30.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.++.|.|.+.. ..+|.+++..++.. ....+.|.|.+++..|
T Consensus 23 ~v~~G~~v~l~C~~~~-------~i~W~~~~~~~~~~--------~~~~~~L~i~~~~~~d 68 (290)
T 2o26_X 23 IVEAGDTLSLTCIDPD-------FVRWTFKTYFNEMV--------ENKKNEWIQEKAEATR 68 (290)
T ss_dssp EEETTSCEEEEEECTT-------EEEEEEECSSSCEE--------EECSSEEEETTCCGGG
T ss_pred EEcCCCcEEEEECCCC-------cEEEecCCcceeee--------cCCCceEEEeccCHHh
Confidence 4678999999999875 67899998443111 1122566666665554
No 356
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=93.20 E-value=0.033 Score=38.95 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=37.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeee-c--C---cCCCceEEEc-----cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIY-L--N---TDTGGKYVVL-----SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~-p--~---~~~dgKY~vl-----psGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+...- .....|++.. ..|. . . ...++||.+. .++.|.|++++.+|.
T Consensus 14 ~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 14 TVSEGASLQLRCKYSYSA---TPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp EEETTSCEEECCEEECSS---CCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred EecCCCeEEEEEEeCCCC---CceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 456899999999985441 2345787632 2221 1 0 1136788883 345699999998874
No 357
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=93.17 E-value=0.06 Score=36.88 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=38.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC------cCCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN------TDTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~------~~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.+..+- .....|++.. ..++.. ....+||.+.. ++.|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 86 (245)
T 3nfj_J 12 VQPVGSPLSLECTVEGTS---NPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDS 86 (245)
T ss_dssp EEETTCCEEEEEEEESCS---SCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGC
T ss_pred EecCCCCEEEEEEecCCC---CceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhC
Confidence 467899999999986432 2345788721 111211 12357888875 33699999998875
No 358
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=93.12 E-value=0.15 Score=32.40 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc---------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT---------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~---------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+.+.... -....|.+.. . .++-.. ...+||.+.. +.-|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~-~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (123)
T 2wzp_D 11 LVQAGGSLRLSCTASRRTGS-NWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPE 89 (123)
T ss_dssp EEETTCCEEEEEEESSCCSS-SEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEecCCCcc-CcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCCCHH
Confidence 45589999999998643212 2457898753 1 222111 1257998863 246999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. +.=-|.+.
T Consensus 90 Ds--g~Y~C~~~ 99 (123)
T 2wzp_D 90 DT--AIYYCAAR 99 (123)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEe
Confidence 74 44455543
No 359
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=93.11 E-value=0.034 Score=38.87 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=39.0
Q ss_pred ceeecCeEEEEccCCCCc-cceeEEeEEccCC-----eee-ecC--------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYM-SEYIIVTSWIQDD-----VNI-YLN--------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd-----~~I-~p~--------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+++|.|.+..+- .. ....|.+++ ..| +-. ...++||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~g~p~~~--~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 11 LVRPSETLSLTCTVSGFSLTS--FSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp EECTTSEEEEEEEEESSCTTT--SCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred cccCCceEEEEEEEecccCCC--ccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 466899999999985432 12 236787752 222 111 12368999875 348999999987
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 89 Ds 90 (257)
T 1f3r_B 89 DT 90 (257)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 360
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=93.11 E-value=0.073 Score=41.68 Aligned_cols=70 Identities=11% Similarity=-0.008 Sum_probs=45.0
Q ss_pred ceeecCeEEEEccCCCCc-cceeEEeEEccCC------eeeecCc--------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYM-SEYIIVTSWIQDD------VNIYLNT--------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd------~~I~p~~--------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+- .+......|++.. ..+|-.. ...+||.++. +..|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 90 (512)
T 1zvo_C 11 LVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAA 90 (512)
T ss_pred EEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCHH
Confidence 566899999999986542 2223567898752 1222111 2358999874 257999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. +.-.|.+.
T Consensus 91 Ds--g~Y~C~~~ 100 (512)
T 1zvo_C 91 DT--AMYYCARG 100 (512)
T ss_pred HC--EEEEEEEE
Confidence 74 44555543
No 361
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=93.10 E-value=0.034 Score=38.25 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=40.2
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
++.|.++.|.|.+..+-..- .-.+|.+++..|.+. .+.+|.|.+ ++.|.|.+++.+|+ ..-.|.+.
T Consensus 166 ~~~g~~v~l~C~~~g~~p~~-~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~--~~~L~i~~~~~~d~--G~Y~C~a~ 239 (254)
T 2c1o_A 166 QLTSGGASVVCFLNNFYPKD-INVKWKIDGSERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH--NSYTCEAT 239 (254)
T ss_dssp HHHTTEEEEEEEEEEEBSSC-CEEEEEESSSEECTTEEEEECCCCTTTCCEEE--EEEEEEEHHHHHTC--CEEEEEEE
T ss_pred hccCCcEEEEEEEecccCCC-cEEEEEECCCcccCcceeccccccCCCCcEEE--EEEEEeccccccCC--CeEEEEEE
Confidence 45688999999985321111 237899998666443 134566654 35788887776553 33445443
No 362
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=93.09 E-value=0.038 Score=39.76 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=39.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee---ecC-------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI---YLN-------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I---~p~-------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-.+ .....|++++ ..| ++. ....+||.+.. ++.|.|++++.+
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 95 (261)
T 2xqy_G 17 LVKPGASVKMSCKASGYSFT-SYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSE 95 (261)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEeCCcccC-CceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcc
Confidence 56689999999998543211 2346898763 111 110 11368999875 357999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 96 Ds 97 (261)
T 2xqy_G 96 DS 97 (261)
T ss_dssp GC
T ss_pred cC
Confidence 74
No 363
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=93.09 E-value=0.06 Score=38.50 Aligned_cols=56 Identities=18% Similarity=0.106 Sum_probs=34.3
Q ss_pred ceeecCeEEEEccCCCC--ccceeEEeEEccCCeeeecCcCCCceEEEccCc-cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSY--MSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG-DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~--V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG-eL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|..... ...-.....|.+|+..|- +++.+.++| .|.|.+++.+|.
T Consensus 131 ~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~------~~~~~~~~~~~L~i~~v~~~d~ 189 (349)
T 4dep_C 131 LYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQ------NFNNVIPEGMNLSFLIALISNN 189 (349)
T ss_dssp EETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECC------SCSSEEEETTEEEEESCCGGGC
T ss_pred eeecCccEEEEcCCCcccccCCCCceEEEeeCCEECC------CccceeecCCEEEEeeeeecCC
Confidence 45689999999974222 112234568999987652 223333444 488888777653
No 364
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=93.07 E-value=0.089 Score=33.22 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=20.8
Q ss_pred ceeecCeEEEEccCCCCccc--eeEEeEEccCCeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSE--YIIVTSWIQDDVNI 51 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d--~V~V~SW~~Dd~~I 51 (98)
.|..|.+++|.|..+..... --....|.+|+..+
T Consensus 18 ~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l 53 (108)
T 4hwn_A 18 EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIV 53 (108)
T ss_dssp SCBTTCCEEEEEEC---------CCEEEEEETTEEE
T ss_pred cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCc
Confidence 47889999999997532111 00126799998655
No 365
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=93.02 E-value=0.038 Score=42.19 Aligned_cols=57 Identities=14% Similarity=0.083 Sum_probs=40.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc-------cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG-------DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG-------eL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+-... ..+|.+++..|.+. ..+|..+.++ .|.|++++.+|.
T Consensus 324 ~v~~G~~v~l~C~~~g~P~p~--~v~W~k~g~~~~~~---~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 387 (524)
T 2ec8_A 324 FVNDGENVDLIVEYEAFPKPE--HQQWIYMNRTFTDK---WEDYPKSENESNIRYVSELHLTRLKGTEG 387 (524)
T ss_dssp EECTTCCEEEEEEEEEESCCC--EEEEESSSCBCSSS---BCCEESCCSSSCCEEEEEEEECSCCGGGC
T ss_pred EEcCCCcEEEEEEEeecCCCc--EEEEEECCeeccCC---ccceeEEccCCCceeEEEEEEeecCcccC
Confidence 678999999999974333322 47899999766442 2377776554 799999887764
No 366
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=93.02 E-value=0.056 Score=36.38 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=38.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC-C-----eeeecCcCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD-D-----VNIYLNTDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D-d-----~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+.+. . ....|.+. . ..|. ...+||.+..++ .|.|++++.+|.
T Consensus 29 ~v~~G~svtL~C~~s~~-~---~~v~Wyrq~~~g~~~~~l~---~~~~rf~~~~~~~~~~L~I~~~~~~Ds 92 (134)
T 3kg5_A 29 ARKRGFTVKMHCYMNSA-S---GNVSWLWKQEMDENPQQLK---LEKGRMEESQNESLATLTIQGIRFEDN 92 (134)
T ss_dssp EEETTCCEEEEEECCCT-T---CCCEEEEESSSSSCCEECC---CCTTTEEEEECSSEEEEEECSCCTTTC
T ss_pred EEeCCCCEEEEEEECCC-C---ceEEEEEECCCCCCcEEEE---EECCeEEEEccCCEEEEEECCCCcCcC
Confidence 45689999999998754 2 34689886 2 1221 135799886544 599999988774
No 367
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=92.99 E-value=0.068 Score=33.44 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=41.6
Q ss_pred ceeecCeEEEEccCCCCcc---ceeEEeEEccCC------eeeecC----cCCCceEEEccCc---cEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMS---EYIIVTSWIQDD------VNIYLN----TDTGGKYVVLSSG---DLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~---d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~n~ 81 (98)
.|..|.++.|.|.+..... +. ....|.+.. ..++.. ....+||.+..++ .|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~-~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds-- 88 (113)
T 1dlf_L 12 PVSLGNQASISCRSSQSLVHSNGN-TYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL-- 88 (113)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSC-BCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC--
T ss_pred EEcCCCCEEEEEEccccccccCCC-ceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHC--
Confidence 3458999999999864431 11 236897643 223321 1235789886433 599999998774
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
+.=-|.+
T Consensus 89 G~Y~C~~ 95 (113)
T 1dlf_L 89 GVYFCSQ 95 (113)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3344443
No 368
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=92.99 E-value=0.11 Score=32.46 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=41.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC--------cCCCceEEEcc-----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN--------TDTGGKYVVLS-----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~--------~~~dgKY~vlp-----sGeL~Ir~v~~~~ 78 (98)
.|..|.+|.|.|.+.+.... -....|.+.. ..| +-. ....+||.+.. +.-|.|++++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~-~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 89 (114)
T 1sjv_A 11 LVQAGESLKLSCAASGNTFS-GGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLEPED 89 (114)
T ss_dssp CCCTTCCEEEEECCCC------CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEEcCcccc-CCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 56689999999998643211 1346898743 122 211 11357998863 2369999999877
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. +.=-|.+.
T Consensus 90 s--G~Y~C~~~ 98 (114)
T 1sjv_A 90 T--AVYYCYTH 98 (114)
T ss_dssp C--SEEEEEEC
T ss_pred C--EEEEEeEE
Confidence 4 44455543
No 369
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=92.98 E-value=0.036 Score=37.65 Aligned_cols=69 Identities=16% Similarity=0.104 Sum_probs=43.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee---ec-------CcCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI---YL-------NTDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I---~p-------~~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+..+-..- ....|.+++ ..+ ++ .....+||.+..+ +.|.|++++.+
T Consensus 130 ~v~~G~~v~L~C~~~g~p~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 208 (240)
T 1moe_A 130 LVEPGASVKLSCTASGFNIKD-TYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSE 208 (240)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEEcCccCCC-CEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHH
Confidence 567899999999986443211 246898852 111 11 0113578888754 47999999988
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ..-.|.+.
T Consensus 209 D~--G~Y~C~a~ 218 (240)
T 1moe_A 209 DT--AVYYCAPF 218 (240)
T ss_dssp GC--EEEEEEEC
T ss_pred HC--EEEEEEEE
Confidence 74 44555554
No 370
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=92.98 E-value=0.042 Score=43.11 Aligned_cols=55 Identities=20% Similarity=0.326 Sum_probs=40.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps---GeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+-. -..+|.+++..|.+ +.+|.+... +.|+|.+++.+|.
T Consensus 395 ~~~~G~~v~l~C~~~g~P~---p~v~W~k~g~~l~~----~~~~~~~~~~~~~~L~i~~v~~~D~ 452 (570)
T 3b43_A 395 ETLKGADVHLECELQGTPP---FQVSWHKDKRELRS----GKKYKIMSENFLTSIHILNVDSADI 452 (570)
T ss_dssp EECTTCCEEEEEEEESSSS---CCCEEEETTEECCS----SSSEEEEEETTEEEEEECSCCGGGC
T ss_pred eecCCCEEEEEEEEecCCC---CEEEEEECCEECcC----CCCEEEEEcCCEEEEEECCCChhhC
Confidence 4568999999999743322 23689999977644 568888765 3688998887764
No 371
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=92.97 E-value=0.088 Score=36.71 Aligned_cols=67 Identities=18% Similarity=0.307 Sum_probs=42.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEc--c---CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVL--S---SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vl--p---sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+..... ....|++.. ..+|-.. ...|||.+. + +..|.|++++.+|. +
T Consensus 11 ~v~~G~~v~L~C~~s~~~~---~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds--g 85 (203)
T 2bnu_A 11 SVPEGENLVLNCSFTDSAI---YNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDS--A 85 (203)
T ss_dssp EEETTCCEEEEEEESCCCE---EEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGC--E
T ss_pred EEeCCCCEEEEEEECCCCc---ceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccC--e
Confidence 4568999999999864432 357998743 1233221 136899886 2 24699999988774 4
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
+=.|.+.
T Consensus 86 ~Y~C~~~ 92 (203)
T 2bnu_A 86 TYLCAVR 92 (203)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4445443
No 372
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=92.96 E-value=0.12 Score=33.61 Aligned_cols=59 Identities=7% Similarity=0.156 Sum_probs=38.9
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCcC----CCceEEEc--c-Cc--cEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNTD----TGGKYVVL--S-SG--DLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~~----~dgKY~vl--p-sG--eL~Ir~v~~~~~ 79 (98)
|..|.++.|.|........+ ...|.+.. ..|+.... ..|||.+. + .| -|.|++++.+|.
T Consensus 14 ~~~G~svtL~C~~s~~~~~~--~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Ds 87 (124)
T 2nms_A 14 GLERGSLTVQCVYRSGWETY--LKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDA 87 (124)
T ss_dssp EETTCCEEEEEEECTTCTTS--EEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EeCCCCEEEEeEEeCCcccc--cEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHC
Confidence 45899999999986554443 46798764 23343211 35788875 2 22 588999998874
No 373
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=92.92 E-value=0.078 Score=41.55 Aligned_cols=55 Identities=22% Similarity=0.469 Sum_probs=40.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc---cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL---SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl---psGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...-. ...+|.+|+..|.+ +++|.+. .++.|.|.+++.+|.
T Consensus 208 ~v~~G~~~~l~C~~~g~p~---p~i~W~k~g~~i~~----~~~~~~~~~~~~~~L~i~~v~~~D~ 265 (570)
T 3b43_A 208 DLALGESGTFKCHVTGTAP---IKITWAKDNREIRP----GGNYKMTLVENTATLTVLKVTKGDA 265 (570)
T ss_dssp CCBSBSCEEEEEEEESSSC---CEEEEEETTEECCT----TSSEEEEEETTEEEEEESSBCGGGC
T ss_pred EecCCCeEEEEEEEEECCC---CEEEEEECCEECcC----CCcEEEEEECCEEEEEEcccCcccC
Confidence 4678999999999854322 24689999977755 5666553 247899999988774
No 374
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=92.92 E-value=0.08 Score=36.78 Aligned_cols=59 Identities=14% Similarity=0.257 Sum_probs=32.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C--eee-ecC---------cCCC-ceEEEc----cCccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D--VNI-YLN---------TDTG-GKYVVL----SSGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d--~~I-~p~---------~~~d-gKY~vl----psGeL~Ir~v~~~ 77 (98)
.|..|.+++|.|.+...- .....|++. . ..+ +.. .... +++.+. .++.|.|++++.+
T Consensus 13 ~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 89 (259)
T 3omz_A 13 IRQTGSSAEITCDLAEGS---TGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEN 89 (259)
T ss_dssp EEETTCCEEEECCC--------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGG
T ss_pred EecCCCcEEEEEEEccCC---CcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcc
Confidence 567899999999986543 335789872 2 222 111 0111 333332 2446999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 90 Ds 91 (259)
T 3omz_A 90 DS 91 (259)
T ss_dssp GC
T ss_pred cC
Confidence 73
No 375
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=92.89 E-value=0.058 Score=38.58 Aligned_cols=61 Identities=10% Similarity=0.049 Sum_probs=38.8
Q ss_pred ceeecCeEEEEccCCCCcc--------ceeEEeEEccCCee---eecCc--CCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMS--------EYIIVTSWIQDDVN---IYLNT--DTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~--------d~V~V~SW~~Dd~~---I~p~~--~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.++..-. +-.....|.+++.. ..+.. ..+.++ ....|.|.|++++.+|.
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~ 91 (349)
T 4dep_C 18 QVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI-SKEKDVLWFRPTLLNDT 91 (349)
T ss_dssp EEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCE-EEETTEEEESSCCGGGC
T ss_pred EEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceE-eecCCEEEEccCChhhC
Confidence 4789999999999875321 11256789998721 11111 123344 34678899999888774
No 376
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=92.88 E-value=0.085 Score=33.74 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=24.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIY 52 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~ 52 (98)
.+..|.++.|.|.+...-. .....|.+++..+.
T Consensus 15 ~v~~G~~v~l~C~~~~~p~--~~~~~W~~~g~~~~ 47 (170)
T 3ry4_A 15 NVLQEDSVTLTCQGARSPE--SDSIQWFHNGNLIP 47 (170)
T ss_dssp EEETTCEEEEEEESCCCSS--SSCEEEEETTEECT
T ss_pred EEECCCcEEEEEEecCCCC--cceEEEEECCeEcc
Confidence 4779999999999876521 22468999886653
No 377
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=92.88 E-value=0.039 Score=32.88 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=36.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--eeeecCcCCCceEEE-ccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--VNIYLNTDTGGKYVV-LSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~~I~p~~~~dgKY~v-lpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+-.- ...|.+++ ..|.+ +.++.. ...+.|.|++++.+|.
T Consensus 13 ~v~~G~~~~l~C~~~g~P~p---~i~W~k~~~~~~~~~----~~~~~~~~~~~~L~i~~~~~~D~ 70 (93)
T 1wit_A 13 KIKAGFTHNLEVDFIGAPDP---TATWTVGDSGAALAP----ELLVDAKSSTTSIFFPSAKRADS 70 (93)
T ss_dssp EECTTBCCEEEEEEECCSSC---EEEEECSTTTCBCST----TSEEEEETTEEEEECTTBCGGGC
T ss_pred EEeCCCEEEEEEEEEEcCCC---EEEEEECCCCcccCC----cEEEEecCCEEEEEECCCChhcC
Confidence 56789999999998544433 36899998 66532 122222 2346688888887764
No 378
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=92.86 E-value=0.058 Score=38.20 Aligned_cols=61 Identities=11% Similarity=0.167 Sum_probs=40.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--c-------CcCCCceEEEccCc-----cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--L-------NTDTGGKYVVLSSG-----DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p-------~~~~dgKY~vlpsG-----eL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+..+-.. .....|.+++ ..| + + .....+||.+..++ .|.|.+++.+
T Consensus 145 ~v~~G~~v~L~C~~~g~~~~-~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 223 (276)
T 3auv_A 145 LVQPGGSLRLSCAASGFTIS-DYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAE 223 (276)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EecCCCeEEEEEEecCccCC-CCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChh
Confidence 67789999999998543211 1347898852 111 1 1 11246799987643 7999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 224 Ds 225 (276)
T 3auv_A 224 DT 225 (276)
T ss_dssp GC
T ss_pred HC
Confidence 75
No 379
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=92.83 E-value=0.11 Score=36.60 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=39.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC----e-ee-ecC---------cCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD----V-NI-YLN---------TDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd----~-~I-~p~---------~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.++.+-.. -....|.+++ . .| +.. ...++||.+..+ +.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~g~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (256)
T 1nqb_A 11 LVKPGASVKLSCKASGYTFT-SYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSE 89 (256)
T ss_dssp EECTTCCEEEEEEECSSCGG-GSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCcEEEEEEeccccCC-CceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChh
Confidence 56689999999998654211 1245788742 1 11 111 123589998753 47999999988
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 90 Ds 91 (256)
T 1nqb_A 90 DS 91 (256)
T ss_dssp GC
T ss_pred hC
Confidence 74
No 380
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=92.82 E-value=0.061 Score=35.69 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=35.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEE----EEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLY----VQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~----Ir~v~~~~ 78 (98)
.+..|.++.|.|.+...-. ....|.+++..+...... .......+|.|+ |++++..|
T Consensus 20 ~v~~G~~v~L~C~~~g~p~---~~v~W~~~g~~~~~~~~~-~~~~~~~~~~~~~~l~i~~v~~~d 80 (217)
T 2vr9_A 20 VVKKNEPATLNCKVEGKPE---PTIEWFKDGEPVSTNEKK-SHRVQFKDGALFFYRTMQGKKEQD 80 (217)
T ss_dssp EECTTSCEEECCEEECSSC---CEEEEEETTEECCCSSSS-SSEEECTTSCEEESSCCBSSSCBC
T ss_pred EEeCCCcEEEEEEcCCCCC---CeEEEEECCcCccCCCcc-ceeEEecCCceEEEEEeccCCccc
Confidence 5678999999999854322 247899998776543222 233345566663 45555444
No 381
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=92.81 E-value=0.12 Score=32.96 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=31.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+.+.-. ....+|.+++..+-.. ..++.|.|.+++.+|
T Consensus 96 ~~~~g~~~~l~C~~~~~~p--~~~~~W~~~g~~~~~~---------~~~~~L~i~~v~~~d 145 (170)
T 3ry4_A 96 EFQEGETIMLRCHSWKDKP--LVKVTFFQNGKSQKFS---------HLDPTFSIPQANHSH 145 (170)
T ss_dssp EECTTCCEEEEEEEGGGCC--EEEEEEEETTEEEEEE---------SSCCEEEESSCCGGG
T ss_pred eeecCCeEEEEEECCCCCC--CceEEEEECCeEcccc---------CCCCeEEEEeccccC
Confidence 5678999999999742211 2567899988655321 124556666666554
No 382
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=92.75 E-value=0.016 Score=38.76 Aligned_cols=65 Identities=14% Similarity=0.191 Sum_probs=40.4
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCc-------CCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNT-------DTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~-------~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
++.|.++.|.|.+..+-.. ....+|.+++..|.+.. +.+| |.+. +.|.|.+++.+|+ ..-.|.+.
T Consensus 125 ~~~g~~v~L~C~~~g~~p~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~-~~~~--s~L~i~~~~~~d~--G~Y~C~a~ 196 (212)
T 1nfd_E 125 ELRTNKATLVCLVNDFYPG-SATVTWKANGATINDGVKTTKPSKQGQN-YMTS--SYLSLTADQWKSH--NRVSCQVT 196 (212)
T ss_dssp HHHTTEECCCEEEEEEBSS-CCEEEEEETTEEECSSCBCCCCBCSSSC-EEEE--EBCCEEHHHHHTC--SCEEEEEE
T ss_pred hccCCceEEEEEEEeeECC-ccEEEEEECCeEcCCCeecCCceecCCC-ceEE--EEEEEchhhcCCC--CeEEEEEE
Confidence 4579999999997633111 13579999987665431 2345 6543 6688888776663 34445443
No 383
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=92.73 E-value=0.11 Score=34.33 Aligned_cols=66 Identities=11% Similarity=0.155 Sum_probs=41.6
Q ss_pred ceeecCeEEEEccCC-CCccceeEEeEEccCC-----e-eee--cCc-------CC-CceEEEccCc---cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIP-SYMSEYIIVTSWIQDD-----V-NIY--LNT-------DT-GGKYVVLSSG---DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IP-s~V~d~V~V~SW~~Dd-----~-~I~--p~~-------~~-dgKY~vlpsG---eL~Ir~v~~~ 77 (98)
.|..|.+|+|.|... .+... ...|.+.. . .++ ... +. .+||.+..++ -|.|++++.+
T Consensus 10 ~v~~G~~vtL~C~~s~~~~~~---~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~L~I~~~~~~ 86 (137)
T 3bdb_A 10 TVKRGENVTMECSMSKVTNKN---NLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGARED 86 (137)
T ss_dssp CCCTTCEECCCCBCTTCCCGG---GBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEEESCCST
T ss_pred EEcCCCCEEEEeecCCCcCcc---eEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEecCCEEEEEECCCCHH
Confidence 456899999999986 44433 36888753 1 222 111 12 5899886544 6999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.=-|.+
T Consensus 87 Ds--g~Y~C~~ 95 (137)
T 3bdb_A 87 DG--GEYFCGE 95 (137)
T ss_dssp TC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 74 3344443
No 384
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=92.72 E-value=0.084 Score=34.44 Aligned_cols=48 Identities=10% Similarity=-0.009 Sum_probs=33.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.++..- .....|.+++..+ ...++.|.|.+++.+|.
T Consensus 108 ~v~~g~~~~l~C~~~~~p---~~~v~W~~~~~~~-----------~~~~~~L~i~~v~~~d~ 155 (184)
T 2ny1_B 108 HLLQGQSLTLTLESPPGS---SPSVQCRSPRGKN-----------IQGGKTLSVSQLELQDS 155 (184)
T ss_dssp EEETTCCEEEEEECCTTC---CCEEEEECTTSCE-----------EEESSEEEESSCCGGGC
T ss_pred eeecCCCEEEEEEcCCCC---CCEEEEEeCCCcc-----------ccCceEEEEecCCcCCC
Confidence 578999999999986642 3467899876332 23566777777776663
No 385
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=92.68 E-value=0.073 Score=37.42 Aligned_cols=68 Identities=12% Similarity=0.122 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeec------------CcCCCceEEEcc-----CccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYL------------NTDTGGKYVVLS-----SGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p------------~~~~dgKY~vlp-----sGeL~Ir~v~ 75 (98)
.|..|.++.|.|.+..+.... ....|++.. ..|.. .....+||.+.. ++.|.|.+++
T Consensus 162 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 240 (268)
T 1x9q_A 162 LVQPGGAMKLSCVTSGFTFGH-YWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLR 240 (268)
T ss_dssp EECTTCCEEEEEEEESSCGGG-CEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred EecCCCcEEEEEEecCccccc-cEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 678999999999986443222 236798642 12211 112468998864 3579999999
Q ss_pred eecCCcceeeeee
Q psy5692 76 SITGNLSVKKMKV 88 (98)
Q Consensus 76 ~~~~n~~~~~~~~ 88 (98)
.+|. ..-.|.+
T Consensus 241 ~~Ds--G~Y~C~a 251 (268)
T 1x9q_A 241 VEDT--GIYYCTG 251 (268)
T ss_dssp GGGC--EEEEEEE
T ss_pred HHHC--EEEEEEE
Confidence 8874 4445554
No 386
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=92.68 E-value=0.088 Score=35.62 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=24.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIY 52 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~ 52 (98)
.|..|.++.|.|.+...-. ....|.+++..+.
T Consensus 29 ~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~ 60 (218)
T 3k0w_A 29 AVLAGQFVKLCCRATGHPF---VQYQWFKMNKEIP 60 (218)
T ss_dssp EEETTSBEEEECEETTTTS---SEEEEEETTEECT
T ss_pred EEeCCCcEEEEeeecCCCC---CEEEEEECCEECC
Confidence 6789999999999865432 2578999986663
No 387
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=92.65 E-value=0.082 Score=33.31 Aligned_cols=69 Identities=7% Similarity=0.005 Sum_probs=41.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc--------CCCceEEEcc-----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT--------DTGGKYVVLS-----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~--------~~dgKY~vlp-----sGeL~Ir~v~~~~ 78 (98)
.|..|.+++|.|.+.+..... ....|.+.. . .++-.. ...+||.+.. +.-|.|++++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~-~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 89 (116)
T 1a2y_B 11 LVAPSQSLSITCTVSGFSLTG-YGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDD 89 (116)
T ss_dssp EECTTSCEEEEEEEESSCTTS-SEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEEcCCCcCC-cEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHH
Confidence 455899999999985432222 347897653 1 222111 1247998863 2369999999876
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. +.=-|.+.
T Consensus 90 s--g~Y~C~~~ 98 (116)
T 1a2y_B 90 T--ARYYCARE 98 (116)
T ss_dssp C--EEEEEEEE
T ss_pred C--EEEEEEEe
Confidence 4 44445443
No 388
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=92.59 E-value=0.094 Score=39.89 Aligned_cols=61 Identities=8% Similarity=0.122 Sum_probs=40.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--cC-------cCCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--LN-------TDTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p~-------~~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+...-.. .....|++++ ..| + .. ....+||.+..+ +.|.|++++.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (475)
T 1iga_A 12 VKKPGASVKVSCKASGYSFT-SYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPE 90 (475)
T ss_pred EEeCCCCEEEEEEecCCCCC-CceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChh
Confidence 56789999999998644211 2347898753 112 1 11 123689988753 47999999987
Q ss_pred cC
Q psy5692 78 TG 79 (98)
Q Consensus 78 ~~ 79 (98)
|.
T Consensus 91 D~ 92 (475)
T 1iga_A 91 DT 92 (475)
T ss_pred hC
Confidence 75
No 389
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=92.58 E-value=0.13 Score=32.60 Aligned_cols=60 Identities=8% Similarity=0.275 Sum_probs=38.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc-----CCCceEEEc--cCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT-----DTGGKYVVL--SSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~-----~~dgKY~vl--psG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...... ....|.+.. ..|+-.. ...|||.+. +++ -|.|++++.+|.
T Consensus 10 ~v~~G~~vtL~C~~~~~~~~--~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds 85 (117)
T 3bp6_A 10 TVSEGANATFTCSLSNWSED--LMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDS 85 (117)
T ss_dssp EECTTCCEEEEEEESSCCTT--CEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEeEeecCCCC--CEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHC
Confidence 35589999999997643222 346898752 2222111 236899884 444 599999987763
No 390
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=92.57 E-value=0.082 Score=35.80 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=37.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC-------cCCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN-------TDTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~-------~~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|. .+.- .....|.+++ . .++-. ....+||.+.. ++.|.|++++.+|.
T Consensus 11 ~v~~G~~v~L~C~-~~~~---~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 85 (238)
T 2p1y_A 11 VAVTGGKVTLSCN-QTNN---HNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQT 85 (238)
T ss_dssp EEETTCCEEEEEE-ECSC---CSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGC
T ss_pred EEeCCCEEEEEee-cCCC---CccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccC
Confidence 4568999999999 3322 2357798852 1 11111 12357888864 44799999998775
No 391
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=92.43 E-value=0.093 Score=33.30 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=41.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc---------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT---------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~---------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+.+..... ....|.+.. . .++-.. ...+||.+.. +.-|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~-~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (121)
T 1j05_H 11 LVEPGASVKLSCTASGFNIKD-TYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSE 89 (121)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEecCcccCC-cEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCCHH
Confidence 345899999999986432121 246887642 1 122111 1247898862 236999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. +.=-|.+.
T Consensus 90 Ds--g~Y~C~~~ 99 (121)
T 1j05_H 90 DT--AVYYCAPF 99 (121)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEE
Confidence 74 44455543
No 392
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=92.38 E-value=0.21 Score=32.34 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=43.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEc--cC-c--cEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVL--SS-G--DLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vl--ps-G--eL~Ir~v~~~~~n~~ 82 (98)
.+..|.+|+|.|...+.-.++ ....|.+.. ..|+... ...|||.+. ++ | -|.|++++.+|. +
T Consensus 21 ~~~~G~svtL~C~~s~~~~~~-~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Ds--g 97 (122)
T 1hkf_A 21 QSVAGQTLTVRCQYPPTGSLY-EKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDS--G 97 (122)
T ss_dssp EECTTCCEEEEEECCCCTTCC-CEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGC--E
T ss_pred EEecCCCEEEEeEccCCCCcc-cEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHHHC--E
Confidence 355899999999986532222 357898874 1233211 236899883 32 2 488999988773 4
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
+=-|.+.
T Consensus 98 ~Y~C~v~ 104 (122)
T 1hkf_A 98 HYWCRIY 104 (122)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4555554
No 393
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=92.34 E-value=0.13 Score=34.44 Aligned_cols=56 Identities=14% Similarity=0.145 Sum_probs=35.4
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEE--cc---CccEEEEeEe-eec
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV--LS---SGDLYVQIRL-SIT 78 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~v--lp---sGeL~Ir~v~-~~~ 78 (98)
.+. .+..|.++.|.|.+...-. ....|.+++..|.+ +++.. .. ...|.|.+++ .+|
T Consensus 14 ~~~-~v~~G~~v~L~C~~~g~p~---~~v~W~k~~~~~~~-----~~~~~~~~~~~~~~~L~i~~v~~~~d 75 (212)
T 2yd6_A 14 VDQ-TGVSGGVASFICQATGDPR---PKIVWNKKGKKVSN-----QRFEVIEFDDGSGSVLRIQPLRTPRD 75 (212)
T ss_dssp CCE-EEETTSCEEEEEEEEEESC---CEEEEEETTEECCC-----TTEEEEEEGGGTEEEEEECSCCTTTT
T ss_pred cee-EEecCCeEEEEEEEeeCCC---CEEEEEECCcCCCC-----CceeEEEEcCCCceEEEEeccCCCCC
Confidence 344 6789999999999753222 25789999876643 23322 22 2348888774 444
No 394
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=92.32 E-value=0.02 Score=41.96 Aligned_cols=60 Identities=23% Similarity=0.199 Sum_probs=41.0
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCC
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGN 80 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n 80 (98)
.+. .|..|.++.|.|.+...-.. ...|.+++..+.+. ..++...++|.|.|++++.+|.-
T Consensus 166 ~~~-~v~~G~~v~L~C~~~g~p~p---~i~W~~~~~~~~~~---~~~~~~~~~~~L~i~~v~~~D~G 225 (347)
T 2ifg_A 166 PNA-SVDVGDDVLLRCQVEGRGLE---QAGWILTELEQSAT---VMKSGGLPSLGLTLANVTSDLNR 225 (347)
T ss_dssp CSS-CCBTTCCEEEEEEEECSSCC---CCCEEESCCCSSEE---ECCCCCSSEEEEEEESCCSTTTT
T ss_pred Cce-EEeCCCcEEEEEEEecCCCC---EEEEEcCCceeecc---cccceecccceEEEeeCChHHCC
Confidence 444 78899999999998443332 34899998444331 23335567889999998887754
No 395
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=92.31 E-value=0.37 Score=30.01 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=40.5
Q ss_pred ceeecCeEEEEccCCC-CccceeEEeEEccCC--------eeeecCc-----CCCceEEEcc-----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPS-YMSEYIIVTSWIQDD--------VNIYLNT-----DTGGKYVVLS-----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs-~V~d~V~V~SW~~Dd--------~~I~p~~-----~~dgKY~vlp-----sGeL~Ir~v~~~~ 78 (98)
.+..|.+++|.|...+ .... ....|.+.. ..++... ...+||.+.. +-.|.|++++.+|
T Consensus 7 ~~~~G~~vtL~C~~~~~~~~~--~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 84 (116)
T 3bia_X 7 IGFLGQPVTLPCHYLSWSQSR--NSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNRGD 84 (116)
T ss_dssp EEETTSCEEECCBCTTCCTTT--CEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred EEeeCCcEEEEEEeeCCCCCe--EEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCChhH
Confidence 4568999999999862 2222 246887754 2233321 1356887642 2369999999876
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. +.=-|.+
T Consensus 85 s--g~Y~C~v 92 (116)
T 3bia_X 85 S--GVYCCRI 92 (116)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 3 3444444
No 396
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=92.29 E-value=0.13 Score=35.18 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=32.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+.+.-. .....|.+|+..+.+. ..++.|.|.+++.+|
T Consensus 99 ~v~~G~~v~L~C~~~~~~p--~~~v~W~k~g~~~~~~---------~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 99 VFKEEDPIHLRCHSWKNTA--LHKVTYLQNGKGRKYF---------HHNSDFYIPKATLKD 148 (204)
T ss_dssp EEETTCCEEEEEEEGGGCC--CEEEEEEETTEEEEEE---------EECCCEEESSCCGGG
T ss_pred eEeCCCcEEEEEEecCCCC--CceEEEEECCcEeecc---------cCCceEEECcCCccc
Confidence 5678999999999742211 2457899998655321 125567776666555
No 397
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=92.27 E-value=0.019 Score=40.96 Aligned_cols=57 Identities=11% Similarity=0.070 Sum_probs=32.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEE-EccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYV-VLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~-vlpsGeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|..+.... ...|.+++..+.+.. ...+.. ...++.|.|++++.+|.
T Consensus 129 ~v~~G~~v~L~C~~~~~~~----~~~w~k~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~D~ 186 (316)
T 3vh8_G 129 LVKSGERVILQCWSDIMFE----HFFLHKEGISKDPSR-LVGQIHDGVSKANFSIGPMMLALA 186 (316)
T ss_dssp EEETTCCEEEEEEESSCCS----EEEEEETTCCSCCEE-EECEEETTEEEEEEEECSCCGGGC
T ss_pred ccCCCCeEEEEEcCCCCCc----EEEEEECCCccccce-eeeeecCCCceEEEEECCCChhhC
Confidence 4778999999999853322 346888875443210 001111 12456777777766553
No 398
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=92.22 E-value=0.093 Score=38.06 Aligned_cols=50 Identities=14% Similarity=0.051 Sum_probs=32.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc----cCccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL----SSGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl----psGeL~Ir~v~ 75 (98)
.|..|.+++|.|..... .. ...|.+|+..+.+. .++... .++.|.|.+|+
T Consensus 117 ~V~~G~~vtL~C~~~~~---~~-~~~w~k~g~~~~~~----~~~~~~~~~~~~~~l~I~~v~ 170 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRSS---YD-MYHLSREGEAHERR----FSAGPKVNGTFQADFPLGPAT 170 (257)
T ss_dssp TCBTTCEEEEEEECSSC---CS-EEEEEETTSSCEEC----CBCBCCSSSCCBEEEEEEECC
T ss_pred ccCCCCEEEEEEeCCCC---Cc-EEEEEECCcccCcc----cccccccCCceeEEEEecccc
Confidence 57899999999997543 22 45799998555431 112222 25678888876
No 399
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=92.18 E-value=0.14 Score=34.24 Aligned_cols=67 Identities=19% Similarity=0.225 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC--c---CCCceEEEc--c---CccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN--T---DTGGKYVVL--S---SGDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~--~---~~dgKY~vl--p---sGeL~Ir~v~~~~~n~ 81 (98)
.|..|.++.|.|.+.....++ ...|.+.. ..++-. . ...+||.+. + +.-|.|++++.+|.
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~--~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Ds-- 86 (142)
T 2ol3_A 11 SVMEKTTVTMDCVYETQDSSY--FLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDS-- 86 (142)
T ss_dssp EEETTCCEEECCBCCCCCSSC--EEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCBGGGTBCCEEECSCCTTTC--
T ss_pred EEecCCCEEEEEEecCCcCCc--eEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEecCCCCEEEEEECCCChhhC--
Confidence 345899999999986543232 47898742 222221 1 125799984 3 33699999997763
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
++=-|.+
T Consensus 87 g~Y~C~~ 93 (142)
T 2ol3_A 87 AVYFCAM 93 (142)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4444444
No 400
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=92.17 E-value=0.11 Score=36.49 Aligned_cols=67 Identities=9% Similarity=-0.004 Sum_probs=43.9
Q ss_pred ceeecCeEEEEccCCC-CccceeEEeEEccCC------eeeecC--cCCCceEEEc--cC---ccEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPS-YMSEYIIVTSWIQDD------VNIYLN--TDTGGKYVVL--SS---GDLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs-~V~d~V~V~SW~~Dd------~~I~p~--~~~dgKY~vl--ps---GeL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|.|.|.+.. ...+ ...|++.. ..+|-. ....|||.+. ++ ..|.|++++.+|. ++
T Consensus 10 ~v~~G~~v~L~C~~s~~~~~~---~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Ds--g~ 84 (206)
T 1kgc_D 10 ESNEEEPVHLPCNHSTISGTD---YIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDA--AV 84 (206)
T ss_dssp EEETTSCEEEEEEESCCCTTC---CEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGC--EE
T ss_pred EEcCCCCEEEEEEEcCCCCCc---cEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEECCCCcccC--cc
Confidence 3568999999999865 2233 47898753 123322 1236899886 22 3699999998876 66
Q ss_pred eeeeeh
Q psy5692 84 KKMKVE 89 (98)
Q Consensus 84 ~~~~~~ 89 (98)
=.|.+.
T Consensus 85 Y~C~~~ 90 (206)
T 1kgc_D 85 YYCILP 90 (206)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 666654
No 401
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=92.16 E-value=0.41 Score=30.99 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=37.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc-----CCCceEEEc--cC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT-----DTGGKYVVL--SS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~-----~~dgKY~vl--ps---GeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+..... -....|.+.. . .++-.. ...+||.+. ++ ..|.|++++.+|.
T Consensus 12 ~v~~G~~vtL~C~~s~~~~--~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Ds 87 (129)
T 3rrq_A 12 VVTEGDNATFTCSFSNTSE--SFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDS 87 (129)
T ss_dssp EEETTSCEEEEEECCCCC---CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEeEecCCCC--CcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHC
Confidence 4558999999999875532 2346898632 1 222111 125799886 43 4699999998874
No 402
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=92.12 E-value=0.045 Score=38.13 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=36.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc---cCccEEEEe-EeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL---SSGDLYVQI-RLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl---psGeL~Ir~-v~~~~~ 79 (98)
.+..|.++.|.|.+...-. ...+|.+++..+.+ +++|.+. ..+.|.|.+ ++..|.
T Consensus 115 ~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~~d~ 173 (305)
T 2nzi_A 115 HALRGEVVSIKIPFSGKPD---PVITWQKGQDLIDN----NGHYQVIVTRSFTSLVFPNGVERKDA 173 (305)
T ss_dssp EEETTCCEEEEEEEEEESC---CEEEEEESSSBCCS----SSSCEEEECSSEEEEEETTCCCSTTC
T ss_pred EecCCCEEEEEEEECCCCC---CEEEEEECCEECCC----CCcEEEEEcCCceEEEEecCCccCcc
Confidence 4567999999999743322 25689998865533 4566665 345677777 666554
No 403
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=92.11 E-value=0.14 Score=39.07 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=37.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecC-------cCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN-------TDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~-------~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+-.. ....+|.+|+..|.++ .+.+|.|.+ +..|.|.+++.+|+
T Consensus 125 ~~~~g~~v~l~C~~~g~~p~-~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~ 190 (523)
T 2rcj_C 125 EELQANKATLVCLISDFYPG-AVTVAWKADGSPVKAGVETTKPSKQSNNKYAA--SSYLSLTPEQWKSH 190 (523)
T ss_pred cccCCCceEEEEEeccccCC-ceEEEEecCCCCCCCceEeccccccCCCCEEE--EEEEEEechhcCCC
Confidence 35679999999998743322 1367899998655331 123455543 23577887776554
No 404
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=92.08 E-value=0.038 Score=36.74 Aligned_cols=66 Identities=20% Similarity=0.280 Sum_probs=39.8
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecCc------CCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNT------DTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~------~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
+..|.++.|.|.+..+-..- ...+|.+|+..|.+.. ..+|.|.+ ++.|.|.+++.+|+ ..-.|.++
T Consensus 126 ~~~g~~v~l~C~~~g~~p~~-~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~--G~Y~C~a~ 197 (213)
T 3mj8_L 126 ELKTNQATLVCMINGFYPAD-VAVTWEADGTPITQGVKTTQPSKSDSKYMA--TSYLTMTADAWKSR--NTFICKVT 197 (213)
T ss_dssp HHTTTEEEEEEEEEEEBSSC-CEEEEEETTEEECTTEEECCCEEETTEEEE--EEEEEEESHHHHSC--SCEEEEEE
T ss_pred cccCCcEEEEEEeeceeCCC-eEEEEEcCCcccCCCcccCCcCccCCcEEE--EEEEEEeHHHcCCC--CEEEEEEE
Confidence 34699999999976332221 2578999987664321 13567765 35577777665543 23444443
No 405
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=92.03 E-value=0.14 Score=32.48 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=42.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc---------CCCceEEEccC-----ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT---------DTGGKYVVLSS-----GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~---------~~dgKY~vlps-----GeL~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+.+.... -....|.+.. ..++-.. ...+||.+..+ .-|.|++++.+
T Consensus 13 ~~~~G~~vtL~C~~~~~~~~-~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 91 (123)
T 2p45_B 13 LVQAGGSLRLSCAASGYAYT-YIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMDSLKPE 91 (123)
T ss_dssp EEETTCCEEEEEEEESCSSC-CSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEESSCCGG
T ss_pred EEeCCCCEEEEEEecCccCc-CcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEECCCCHH
Confidence 45589999999998543212 1346898753 1233211 13579988632 36999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. +.=-|.+.
T Consensus 92 Ds--g~Y~C~~~ 101 (123)
T 2p45_B 92 DT--ATYYCAAG 101 (123)
T ss_dssp GC--EEEEEEES
T ss_pred HC--EEEEEEEE
Confidence 74 44455543
No 406
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=92.02 E-value=0.18 Score=35.34 Aligned_cols=67 Identities=15% Similarity=0.156 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCcC---CCceEEEc--cC---ccEEEEeEeeecCCcce
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNTD---TGGKYVVL--SS---GDLYVQIRLSITGNLSV 83 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~~---~dgKY~vl--ps---GeL~Ir~v~~~~~n~~~ 83 (98)
.|..|.+|.|.|.+...... ...|.+.. ..+|-... ..|||.+. ++ ..|.|++++.+|. ++
T Consensus 10 ~v~~G~~vtL~C~~s~~~~~---~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds--g~ 84 (200)
T 2nw2_A 10 TATEGAIVQINCTYQTSGFN---GLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDS--AS 84 (200)
T ss_dssp EEETTCCEEEEEECCCSSCC---CEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGC--EE
T ss_pred EEccCCCEEEEEEECCCCCc---eEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccC--Cc
Confidence 35589999999998655432 46898743 22332211 16899885 32 3699999988764 45
Q ss_pred eeeeeh
Q psy5692 84 KKMKVE 89 (98)
Q Consensus 84 ~~~~~~ 89 (98)
=-|.+.
T Consensus 85 Y~C~~~ 90 (200)
T 2nw2_A 85 YLCAVQ 90 (200)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 555543
No 407
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=92.01 E-value=0.27 Score=31.63 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=36.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeee-cCc-------CCCceEEEc-cC---ccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIY-LNT-------DTGGKYVVL-SS---GDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~-p~~-------~~dgKY~vl-ps---GeL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|.. +. . -....|.+.. ..|+ -.. ...+||.+. ++ .-|.|++++.+|.
T Consensus 12 ~v~~G~~vtL~C~~-~~--~-~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~Ds 86 (121)
T 2oi9_C 12 VAVTGEKVTLSCNQ-TN--N-HNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPSQENFSLTLESATPSQT 86 (121)
T ss_dssp EEETTCCEEEEEEE-SS--C-CSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCSSSEEEEEESSCCGGGC
T ss_pred EecCCCcEEEEEEe-cC--C-CCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCCCCEEEEEECCCCHHHC
Confidence 34589999999994 32 1 1347898743 2232 111 125788875 32 3599999998774
No 408
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=91.98 E-value=0.056 Score=38.80 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=33.5
Q ss_pred eecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeec
Q psy5692 20 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
+.|.++.|.|.+..+-..-+ ..+|.+|+..|-+. .+.+|.|.+ ++.|.|..++.+|
T Consensus 232 ~~g~~~~l~C~~~g~~p~~~-~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d 295 (323)
T 2wqr_A 232 GSRDKRTLACLIQNFMPEDI-SVQWLHNEVQLPDARHSTTQPRKTKGSGFFV--FSRLEVTRAEWEQ 295 (323)
T ss_dssp TCTTEEEEEEEEEEEBSSCC-EEEEEETTEECCGGGEEECCCEECSSSSEEE--EEEEEEEHHHHHH
T ss_pred hcCCcEEEEEEeeeeeCCCc-EEEEEECCEECCCCceeecCcccCCCCcEEE--EEEEEEChHHccC
Confidence 45999999999753221112 46799998766331 123455554 3457776665544
No 409
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=91.96 E-value=0.12 Score=33.23 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=41.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc---------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT---------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~---------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+.++-.. -....|.+.. ..| +-.. ...|||.+.. +.-|.|++++.+
T Consensus 13 ~v~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 91 (121)
T 2xt1_B 13 LVQAGGSLRLSCAASGSFFM-SNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDLKPE 91 (121)
T ss_dssp EEETTCCEEEEEEEESSSCC-CSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEeCCCCEEEEEEecCeecc-CceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCCCHH
Confidence 45589999999998543211 2347898742 222 2111 1357998863 346999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.=-|.+
T Consensus 92 Ds--G~Y~C~~ 100 (121)
T 2xt1_B 92 DT--AMYYCKA 100 (121)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 74 4444544
No 410
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=91.94 E-value=0.14 Score=35.99 Aligned_cols=56 Identities=13% Similarity=0.177 Sum_probs=32.7
Q ss_pred eeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc--cCc---cEEEEeEee-ec
Q psy5692 14 NYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL--SSG---DLYVQIRLS-IT 78 (98)
Q Consensus 14 ~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl--psG---eL~Ir~v~~-~~ 78 (98)
.+. .|..|.++.|.|.+...-. ....|.+++..|. ++++.+. ++| .|.|.+++. .|
T Consensus 14 ~~~-~v~~G~~v~l~C~~~g~p~---~~i~W~k~g~~i~-----~~~~~~~~~~~~~~~~L~i~~~~~~~D 75 (304)
T 2yd9_A 14 KDQ-IGVSGGVASFVCQATGDPK---PRVTWNKKGKKVN-----SQRFETIEFDESAGAVLRIQPLRTPRD 75 (304)
T ss_dssp CCE-EEETTSCEEEEEEEECSSC---CEEEEC------------CTTEEEEEETTTTEEEEEECSCCTTTT
T ss_pred Cce-EecCCCeEEEEEEEEEeCC---CeEEEEECCEECC-----CCceEEEEecCCCceEEEEecccccCC
Confidence 344 6789999999999753322 2468999986652 3455553 454 488888875 55
No 411
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=91.92 E-value=0.1 Score=32.95 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=40.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC---------cCCCceEEEcc---C--ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVLS---S--GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vlp---s--GeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+.+.-... ....|.+.. . .++-. ....+||.+.. . .-|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~-~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (120)
T 1n4x_H 11 LKKPGETVKISCKATNYAFTD-YSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNE 89 (120)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCeEEEEEEecCcccCC-cEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCHH
Confidence 345899999999975432111 246887653 1 22211 12357998862 2 36999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.=-|.+
T Consensus 90 Ds--G~Y~C~~ 98 (120)
T 1n4x_H 90 DT--ATYFCVR 98 (120)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 64 4444444
No 412
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=91.89 E-value=0.1 Score=36.07 Aligned_cols=69 Identities=12% Similarity=-0.061 Sum_probs=42.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e---e-eecCc--------CCCceEEEcc-----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V---N-IYLNT--------DTGGKYVVLS-----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~---~-I~p~~--------~~dgKY~vlp-----sGeL~Ir~v~~~~ 78 (98)
.|..|.++.|.|.+...-.. -....|.+++ . . ++... ..++||.+.. ++.|.|++++.+|
T Consensus 133 ~v~~G~~v~L~C~~~g~~~~-~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 211 (242)
T 2znx_A 133 LVKPSQTLSLTCSVTGDSIT-SDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 211 (242)
T ss_dssp EECTTSCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGG
T ss_pred eecCCCeEEEEEEEEccccC-CcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCc
Confidence 57799999999998643210 1235798742 1 1 22111 1367898864 2479999999887
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ..-.|.+.
T Consensus 212 ~--G~Y~C~a~ 220 (242)
T 2znx_A 212 T--ATYYCANX 220 (242)
T ss_dssp C--EEEEEEET
T ss_pred C--EEEEEecc
Confidence 4 34445543
No 413
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=91.85 E-value=0.091 Score=35.91 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=19.1
Q ss_pred ceeecCeEEEEccCC---CCccceeEEeEEccC
Q psy5692 18 NVILGNTAVLRCQIP---SYMSEYIIVTSWIQD 47 (98)
Q Consensus 18 ~VirGNtAVLkC~IP---s~V~d~V~V~SW~~D 47 (98)
.|..|.+++|.|.+. +.-.. .....|.++
T Consensus 14 ~v~~G~~v~L~C~~~g~p~~~~~-~~~v~W~k~ 45 (248)
T 3pv7_A 14 ITPLNDNVTIFCNIFYSQPLNIT-SMGITWFWK 45 (248)
T ss_dssp EEETTSCEEECCEEEESSCCCTT-SCEEEEEEE
T ss_pred EEeCCCCEEEeeEEecCCCcCCC-ceEEEEEEE
Confidence 567899999999982 21111 224678876
No 414
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=91.71 E-value=0.077 Score=38.30 Aligned_cols=68 Identities=13% Similarity=0.184 Sum_probs=42.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC---------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN---------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.+..+-.. ....+|++.+ ..| +-. ....+||.+.. ++.|.|++++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (257)
T 3bn9_D 11 LVKPGGSLRLSCAASGFTFS-SYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE 89 (257)
T ss_dssp EECTTCEEEEEEEEESSCGG-GCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred EEcCCCcEEEEEEeccccCC-CceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 45689999999997644211 2347898753 111 111 11358998874 347999999988
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..--|.+
T Consensus 90 Ds--G~Y~C~~ 98 (257)
T 3bn9_D 90 DT--AVYYCAR 98 (257)
T ss_dssp GC--EEEEEEE
T ss_pred hC--EEEEEEE
Confidence 75 3444444
No 415
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=91.71 E-value=0.083 Score=33.14 Aligned_cols=69 Identities=12% Similarity=0.135 Sum_probs=41.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc---------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT---------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~---------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+.+.... -....|.+.. . .++-.. ...+||.+.. +.-|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~-~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (117)
T 2yc1_A 11 LVQPGGSLRLSCTGSGFTFD-NYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSLRAE 89 (117)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCeEEEEEEecCcccC-CCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCCCHH
Confidence 45589999999998543211 1236887742 1 222111 1257998863 236999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. +.=-|.+.
T Consensus 90 Ds--g~Y~C~~~ 99 (117)
T 2yc1_A 90 DT--AVYYCARG 99 (117)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEE
Confidence 74 44455543
No 416
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=91.71 E-value=0.44 Score=31.62 Aligned_cols=33 Identities=15% Similarity=0.347 Sum_probs=24.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI 51 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I 51 (98)
.+..|..+.|.|.+..|=-.-+.| +|.+|+..+
T Consensus 34 ~~~~~~~~tL~C~a~gFyP~~I~v-~W~knG~~i 66 (119)
T 1bii_B 34 PPENGKPNILNCYVTQFHPPHIEI-QMLKNGKKI 66 (119)
T ss_dssp CCCSSSCEEEEEEEEEEBSSCCEE-EEEETTEEC
T ss_pred cccCCCCEEEEEEEEeecCCCeEE-EEEECCEEC
Confidence 344677899999987654455666 999998665
No 417
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=91.69 E-value=0.017 Score=42.10 Aligned_cols=56 Identities=11% Similarity=-0.066 Sum_probs=31.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceE-EEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKY-VVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY-~vlpsGeL~Ir~v~~~~ 78 (98)
.|..|.+++|+|..+.- . ....|.+|+..+.+... .+++ ....++.|.|.+++..|
T Consensus 17 ~V~~G~~VtL~C~~~~~---~-~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D 73 (257)
T 1b6u_A 17 LVKSEETVILQCWSDVR---F-QHFLLHREGKFKDTLHL-IGEHHDGVSKANFSIGPMMQDL 73 (257)
T ss_dssp EEESSCCEEEEEEESSC---C-SEEEEEEESTTCEEEEE-ECBCCTTCEEEEEEECSCCTTT
T ss_pred EecCCCCEEEEEecCCC---C-cEEEEEECCCCCCccee-eeeccCCCceEEEEeecCCccc
Confidence 56799999999997532 2 24679998744332100 0111 01235666666665544
No 418
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.65 E-value=0.034 Score=37.38 Aligned_cols=61 Identities=11% Similarity=0.151 Sum_probs=36.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecCcCCCceEEEc---------cCccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYVVL---------SSGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~~~dgKY~vl---------psGeL~Ir~v~~~~~n 80 (98)
.|..|.+|+|.|.+...--.-.-...|+++. ..+-. ..+.++.+. .++.|.|++|...|.-
T Consensus 23 ~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 93 (118)
T 2edn_A 23 SVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGS--KSGARFSFKESHNSASNVYTVELHIGKVVLGDRG 93 (118)
T ss_dssp EEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCC--STTSSCEEEEEECSSSCEEEEEEEESSCCTTTCS
T ss_pred EEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCC--CCccEEEeccccccccccceEEEEEeeCChhhCE
Confidence 5678999999998731100002256799875 32211 113444432 2588999999888753
No 419
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=91.57 E-value=0.12 Score=34.95 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=31.5
Q ss_pred eecCeEEEEccCCCCccc-eeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeE
Q psy5692 20 ILGNTAVLRCQIPSYMSE-YIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIR 74 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d-~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v 74 (98)
..|.+|.|.|.+..+-.. --...+|.+++..+.... .+....+++|.|.|...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~--~~~~~~~~~g~~~~~~~ 69 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK--TKPREEQYNSTYRVVSV 69 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCE--ECCCEECTTSCEEEEEE
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcc--cCCceeccCCcEEEEEE
Confidence 589999999998643211 013689999996653311 12333445565555543
No 420
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=91.56 E-value=0.12 Score=36.65 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=42.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeee-cC---cCCCceEEEc--c---CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIY-LN---TDTGGKYVVL--S---SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~-p~---~~~dgKY~vl--p---sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+...... ...|++.. ..++ -. ....|||.+. + +..|.|++++.+|. +
T Consensus 14 ~v~~G~svtL~C~~s~~~~~---~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Ds--g 88 (210)
T 2eys_A 14 IILEGKNCTLQCNYTVSPFS---NLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDS--A 88 (210)
T ss_dssp EEETTCCEEEEEEECCSSCC---EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGC--E
T ss_pred EEecCCCEEEEEEECCCCCC---eEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccC--c
Confidence 45589999999998655433 47898753 2233 11 1126899886 2 24799999998774 3
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
+=-|.+
T Consensus 89 ~Y~C~~ 94 (210)
T 2eys_A 89 SYICVV 94 (210)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 444443
No 421
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=91.54 E-value=0.27 Score=33.95 Aligned_cols=34 Identities=6% Similarity=0.124 Sum_probs=24.7
Q ss_pred ceeecCeEEEEccCCC-CccceeEEeEEccCCeeee
Q psy5692 18 NVILGNTAVLRCQIPS-YMSEYIIVTSWIQDDVNIY 52 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs-~V~d~V~V~SW~~Dd~~I~ 52 (98)
.|..|.++.|.|.+.. +-+.- ...+|.+++..+.
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~-~~v~W~k~~~~l~ 48 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSE-AQVHLALGDQRLN 48 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGG-CEEEEEETTEECC
T ss_pred eEecCCCEEEEEEccCCCCCcc-eEEEEEeCCEECC
Confidence 6778999999999764 33221 2578999996663
No 422
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=91.52 E-value=0.17 Score=32.15 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=42.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc--------CCCceEEEcc--C---ccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT--------DTGGKYVVLS--S---GDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~--------~~dgKY~vlp--s---GeL~Ir~v~~~~ 78 (98)
.|..|.+|.|.|.+.+.... -....|.+.. ..| +-.. ...+||.+.. + .-|.|++++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~-~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 89 (121)
T 1kxv_C 11 TVPAGGSLRLSCAASGNTLC-TYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDD 89 (121)
T ss_dssp EECTTCCEEEEEEEESCTTC-CEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEecCCCcC-ceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHH
Confidence 45589999999998543212 2457898753 122 2111 1247898863 2 369999999876
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. +.=-|.+.
T Consensus 90 s--g~Y~C~~~ 98 (121)
T 1kxv_C 90 T--AMYYCKPS 98 (121)
T ss_dssp C--EEEEEEEE
T ss_pred C--EEEEEEEE
Confidence 4 44455543
No 423
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=91.51 E-value=0.49 Score=30.50 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=28.5
Q ss_pred EEeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeec
Q psy5692 12 NVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYL 53 (98)
Q Consensus 12 ~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p 53 (98)
++... .|..|.++.|.|.+...-.. .....|.+++..|..
T Consensus 4 ~i~~~-~v~~G~~v~l~C~~~~~~~p-~~~~~W~k~~~~l~~ 43 (184)
T 3b5h_A 4 TVFTT-VEDLGSKILLTCSLNDSATE-VTGHRWLKGGVVLKE 43 (184)
T ss_dssp EEEEE-EEEETTEEEEEEEEESCSSC-CCEEEEESSSEEEEC
T ss_pred ceEEE-EEecCCCEEEEEECCCCCCC-ceEEEEEeCCEEeec
Confidence 45555 78899999999997544322 235789999876654
No 424
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=91.45 E-value=0.066 Score=36.15 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=29.9
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEee
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLS 76 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~ 76 (98)
++.|.++.|.|.+..+-.. -...+|.+|+..|.+. .+.+|.|.+. +.|.|..++.
T Consensus 146 ~~~g~~v~L~C~~~g~~p~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~ 208 (233)
T 3bqu_C 146 QLTSGGASVVCFLNNFYPK-DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS--STLTLTKDEY 208 (233)
T ss_dssp HHHTTEEEEEEEEEEEBSS-CEEEEEEEC-----CCEEEEECCCCTTTCCEEEE--EEEEEEHHHH
T ss_pred hhcCCceEEEEEEccccCC-ceEEEEEECCeeCCCCceEecCCccCCCCCEEEE--EEEEECHHHh
Confidence 4569999999998642211 1247899998555332 1345666542 3455655444
No 425
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=91.44 E-value=0.15 Score=38.91 Aligned_cols=70 Identities=13% Similarity=0.148 Sum_probs=42.5
Q ss_pred ceeecCeEEEEccCCCC-ccceeEEeEEccCC------eeeecC----------cCCCceEEEccC-----ccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSY-MSEYIIVTSWIQDD------VNIYLN----------TDTGGKYVVLSS-----GDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd------~~I~p~----------~~~dgKY~vlps-----GeL~Ir~v~ 75 (98)
.+..|.+++|.|.+.+. ...-.....|.+.. ..++-. ....||+....+ ..|.|++++
T Consensus 396 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 475 (507)
T 3oai_A 396 HGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHNLD 475 (507)
T ss_dssp EEETTCCEEECCEECCSSCCCSSCEEEEEEEETTCSCCEEEEEEETTEEEECTTCTTTTTEEECCBGGGTBCCEEECSCC
T ss_pred EEecCCcEEEeeEecCCCCCCCceEEEEEEcCCCCCceEEEEEecCCcccCCCCccccceEEEecCCCCCceeEEECCCC
Confidence 45689999999998322 21123356687542 122211 123678887644 479999999
Q ss_pred eecCCcceeeeeeh
Q psy5692 76 SITGNLSVKKMKVE 89 (98)
Q Consensus 76 ~~~~n~~~~~~~~~ 89 (98)
.+|. ..=.|.+.
T Consensus 476 ~~D~--g~Y~C~v~ 487 (507)
T 3oai_A 476 YSDN--GTFTCDVK 487 (507)
T ss_dssp GGGC--EEEEEEEE
T ss_pred cccC--eEEEEEEE
Confidence 9884 44555553
No 426
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=91.42 E-value=0.21 Score=32.62 Aligned_cols=50 Identities=20% Similarity=0.117 Sum_probs=34.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRL 75 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~ 75 (98)
.+..|.++.|.|.+..+-... ..+|.+++..+.+... + ..++.|.|.+++
T Consensus 117 ~~~~g~~~~l~C~~~g~p~p~--~v~W~~~~~~~~~~~~----~--~~~~~L~i~~~~ 166 (195)
T 2c5d_C 117 TVAANTPFNLSCQAQGPPEPV--DLLWLQDAVPLATAPG----H--GPQRSLHVPGLN 166 (195)
T ss_dssp EECTTCCEEEEEEEECSSCCC--EEEEEESSCBSSSSTT----S--SCCEEEEECCCS
T ss_pred EEcCCCEEEEEeECCCCCCCC--EEEEEECCEeccCCCC----c--CCCCeEEEcccc
Confidence 567899999999986543321 4689999876644211 1 566777777766
No 427
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=91.36 E-value=0.15 Score=35.51 Aligned_cols=66 Identities=14% Similarity=0.048 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc----CCCceEEEc--c---CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT----DTGGKYVVL--S---SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~----~~dgKY~vl--p---sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+..... ....|.+.. . .+|-.. ...+||.+. + +..|.|++++.+|. +
T Consensus 12 ~v~~G~~v~L~C~~s~~~~---~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Ds--g 86 (194)
T 1lp9_E 12 TLTEGLPVMLNCTYQSTYS---PFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDS--A 86 (194)
T ss_dssp EEETTSCEEECEEEECSSS---CCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGC--E
T ss_pred EEecCCCEEEEEEeCCCCC---ceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccC--e
Confidence 4558999999999754432 236898653 1 333221 236899986 2 45799999998774 4
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
+=-|.+
T Consensus 87 ~Y~C~~ 92 (194)
T 1lp9_E 87 LYYCAL 92 (194)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 444544
No 428
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=90.69 E-value=0.037 Score=39.19 Aligned_cols=66 Identities=15% Similarity=0.214 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecC----cCCCceEEEcc-----CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLN----TDTGGKYVVLS-----SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~----~~~dgKY~vlp-----sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+...... ...|++.. ..||-. ....|||.+.. +..|.|++++.+|. +
T Consensus 11 ~v~~G~svtL~C~~s~~~~~---~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~Ds--G 85 (185)
T 3c6l_A 11 TVWEGETAILNCSYEDSTFD---YFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDS--A 85 (185)
Confidence 45689999999998654332 57899864 122321 12368998862 44799999998874 3
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
+-.|.+
T Consensus 86 ~Y~C~~ 91 (185)
T 3c6l_A 86 TYFCAA 91 (185)
Confidence 444444
No 429
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=91.29 E-value=0.099 Score=35.12 Aligned_cols=55 Identities=16% Similarity=0.308 Sum_probs=33.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc----CCeeeecCcCCCceEEE----------ccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ----DDVNIYLNTDTGGKYVV----------LSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~----Dd~~I~p~~~~dgKY~v----------lpsGeL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+..+-.. ..+|.+ ++..+.+. +..+.. ..++.|.|.++..+|
T Consensus 125 ~~~~g~~v~L~C~~~~~p~p---~v~W~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 193 (241)
T 3grw_A 125 TAVLGSDVEFHCKVYSDAQP---HIQWLKHVEVNGSKVGPD---GTPYVTVLKSWISESVEADVRLRLANVSERD 193 (241)
T ss_dssp ECCTTCCEEEEEEEECSSCC---EEEEEEECCSSSCSSCTT---TCCCEEEEEEEECSBSEEEEEEEECSCCGGG
T ss_pred eecCCCEEEEEEEEecCCCC---EEEEEEcccCCCcccCCC---CceeeeeeeEeeeeecCCceEEEECcCCccc
Confidence 46679999999998554333 678998 55544331 222221 134567777776665
No 430
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=91.28 E-value=0.038 Score=43.70 Aligned_cols=55 Identities=11% Similarity=0.206 Sum_probs=0.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc-CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS-SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp-sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-. -...|.+++..|.+ ++++.+.. +|.|.|++++.+|.
T Consensus 677 ~v~~g~~~~l~C~~~g~P~---p~v~W~k~g~~l~~----~~~~~~~~~~~~L~I~~v~~~D~ 732 (772)
T 3v2a_R 677 TTSIGESIEVSCTASGNPP---PQIMWFKDNETLVE----DSGIVLKDGNRNLTIRRVRKEDE 732 (772)
T ss_dssp ---------------------------------------------------------------
T ss_pred EEeCCCCEEEEEEeCccCC---CeEEEEECCeECcC----CCCeEEcCCCcEEEECcCCHHHC
Confidence 5778999999999753322 25689999977754 34666654 88999999998874
No 431
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=91.24 E-value=0.15 Score=37.29 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=36.2
Q ss_pred eecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeec
Q psy5692 20 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
..|.+++|.|.+... ...-...|..++..+ +. ..+++. ..+|.|.|.+++..|
T Consensus 19 ~~G~~v~l~C~~~~~--~~~~~i~W~~~~~~~-~~--~~~~~~-~~~~~L~i~~v~~~d 71 (325)
T 1n26_A 19 LPGDSVTLTCPGVEP--EDNATVHWVLRKPAA-GS--HPSRWA-GMGRRLLLRSVQLHD 71 (325)
T ss_dssp CTTCCEEEECTTSCT--TCCSEEEEEEECSSS-SC--CCEEEE-EESSEEEECSCCGGG
T ss_pred CCCCcEEEEeCCCCC--CCCceEEEEECCccC-Cc--cccccc-cccceEEecccchhh
Confidence 489999999996532 112345799988544 21 234555 457999999998876
No 432
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=91.19 E-value=0.024 Score=40.80 Aligned_cols=59 Identities=15% Similarity=0.301 Sum_probs=36.1
Q ss_pred eeecCeEEEEccCCCCc-cceeEEeEEccCC-eeeecC-----cCCCceEEEccCccEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYM-SEYIIVTSWIQDD-VNIYLN-----TDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd-~~I~p~-----~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
+..|.+|.|.|.+..+- ++-....+|.+++ ..+... ...+|+|. .++.|.|.+++.+|+
T Consensus 125 v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~--~~~~L~I~~~~~~D~ 190 (323)
T 2wqr_A 125 LFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT--VTSTLPVGTRDWIEG 190 (323)
T ss_dssp HHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE--EEEEEECCHHHHHTT
T ss_pred hccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE--EEEEEEECHHHccCC
Confidence 56799999999975331 2211247899976 433211 13456665 456788888777663
No 433
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=91.18 E-value=0.57 Score=30.69 Aligned_cols=47 Identities=13% Similarity=0.248 Sum_probs=30.3
Q ss_pred eecCeEEEEccCC-CCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEE
Q psy5692 20 ILGNTAVLRCQIP-SYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQ 72 (98)
Q Consensus 20 irGNtAVLkC~IP-s~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir 72 (98)
..|+++.|.|.++ .+-.. ..+|.+++..|.+ ...++...+.|.||+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p---~i~W~k~g~~l~~---~~~~~~~~~~~~~~~~ 166 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEP---HLSWLENGEELNA---INTTVSQDPETELYAV 166 (201)
T ss_dssp SSTTEEEEEEEEEEESSCE---EEEEEESSCEECC---SEEEEEECTTTCCEEE
T ss_pred CCCCeEEEEEecCCccCCC---EEEEEECCEECcc---ccceEEecCCCcEEEE
Confidence 3588999999974 33332 5789999876643 2345555566555443
No 434
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=91.15 E-value=0.062 Score=39.32 Aligned_cols=66 Identities=5% Similarity=0.042 Sum_probs=40.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEE------ccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV------LSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~v------lpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.+..|.++.|.|.+..+-.. ..+|.+++..|..+.....++.. ..+|.|.|.+++.+|. ..-.|..
T Consensus 257 ~~~~g~~v~l~C~~~g~P~p---~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~--G~Y~C~a 328 (347)
T 2ifg_A 257 TAVEMHHWCIPFSVDGQPAP---SLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN--GNYTLLA 328 (347)
T ss_dssp CCEESSSEEEEEEEEEESCC---EEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGC--EEEEEEE
T ss_pred cCccCceEEEEEEeeecCCC---cEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccC--ceEEEEE
Confidence 56789999999998655333 45899998766431110111111 2367799999988773 3444543
No 435
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=91.14 E-value=0.083 Score=35.35 Aligned_cols=54 Identities=15% Similarity=0.202 Sum_probs=31.6
Q ss_pred eecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEee
Q psy5692 20 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLS 76 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~ 76 (98)
+.|+++.|.|.+..+-.. -...+|.+++..|.+. .+.+|.|.+. ..|.|..++.
T Consensus 127 ~~g~~v~L~C~~~g~~P~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~ 188 (216)
T 2xzc_L 127 LKSGTASVVCLLNNFYPR-EAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLS--STLTLSKADY 188 (216)
T ss_dssp HHTTEEEEEEEEEEEBSS-CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEE--EEEEEEHHHH
T ss_pred ccCCcEEEEEEEEeEcCC-ceEEEEEECCeecCCCeeEecCcccCCCCCEEEE--EEEEECHHHh
Confidence 469999999998642211 1247899998665332 1245666442 2455555443
No 436
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=91.13 E-value=0.073 Score=35.86 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=41.6
Q ss_pred ceeecCeEEEEccCCCC-ccceeEEeEEccCCe----eeecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeehHH
Q psy5692 18 NVILGNTAVLRCQIPSY-MSEYIIVTSWIQDDV----NIYLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVEEE 91 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd~----~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~~~ 91 (98)
.+..|.++.|.|.+..+ -+. ...+|.+++. ...|.....|.|.+ ++.|.|.++...+ ..-.|.+.-+
T Consensus 136 ~~~~g~~v~L~C~~~g~~P~p--~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~---g~Y~C~a~n~ 207 (220)
T 1pz5_B 136 SDTSGSSVTLGCLVKGYFPEP--VTVKWNYGALSSGVRTVSSVLQSGFYSL--SSLVTVPSSTWPS---QTVICNVAHP 207 (220)
T ss_dssp CCSCSSSEEEEEEEEEEBSSC--CEEEEGGGTCCTTEEECCCEEETTEEEE--EEEEEECGGGTTT---SCCEEEEEEG
T ss_pred ccCCCCcEEEEEEEEEEeCCC--eEEEEecCCcccceEEcCCcccCCeEEE--EEEEEEcchhcCC---ceEEEEEEEC
Confidence 35689999999998633 222 2578999874 22332212277776 5778887766522 5566766543
No 437
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=91.00 E-value=0.14 Score=32.33 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC---------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+.+.... -....|.+.. . .++-. ....+||.+.. +.-|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~-~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (120)
T 3b9v_A 11 LVQPGGSLRLSCAASGFNIK-DTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAE 89 (120)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEeCCccEEEEEEeeCcccc-ccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCCCHH
Confidence 45589999999998543212 2357888743 1 22211 11357998863 236999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. +.=-|.+
T Consensus 90 Ds--g~Y~C~~ 98 (120)
T 3b9v_A 90 DT--AVYYCAR 98 (120)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 74 4444544
No 438
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=90.94 E-value=0.11 Score=36.87 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=38.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc--CCe---ee-ecC----cCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ--DDV---NI-YLN----TDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~--Dd~---~I-~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+...- ....|.+ +.. .| +.. ...++||.+.. ++.|.|++++.+|.
T Consensus 173 ~v~~G~~v~L~C~~~~~~----~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 243 (282)
T 1qok_A 173 SASPGEKVTITCSASSSV----SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDA 243 (282)
T ss_dssp EECTTCCEEEEEEESSCC----SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEcCCCcEEEEEEecCCC----ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHC
Confidence 467899999999986544 3678998 332 12 211 12357888754 44699999988773
No 439
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=90.87 E-value=0.12 Score=38.01 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=35.1
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
++.|.++.|.|.+..+-.. -...+|.+|+..|.+. .+.+|.|.+ ++.|.|.+++.+|
T Consensus 128 ~~~g~~~~l~C~~~g~~p~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d 192 (438)
T 1qgc_4 128 QLTSGGASVVCFLNNFYPK-DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYER 192 (438)
T ss_dssp HHHTTEEEEEEEEEEEBSS-CEEEEEEETTEEECTTEEEEEECCCTTTCCEEE--EEEEEEEHHHHHT
T ss_pred hccCCceEEEEEEccccCC-CcEEEEEECCEEcCCCceeccccccCCCCcEEE--EEEEEEeCcccCC
Confidence 4568999999997531111 1357899998766443 124566654 4567776665544
No 440
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=90.86 E-value=0.29 Score=33.00 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=24.1
Q ss_pred ceeecCeEEEEccCCCCcc--ceeEEeEEccCCeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMS--EYIIVTSWIQDDVNIY 52 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~--d~V~V~SW~~Dd~~I~ 52 (98)
.+..|.++.|.|.+...-. +..-..+|.+++..+.
T Consensus 181 ~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~ 217 (262)
T 3rjd_A 181 PLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLR 217 (262)
T ss_dssp SEETTCCEEEEEECCCCCC-----EEEEEEETTEEEE
T ss_pred eecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEec
Confidence 4778999999999864432 3233468999986664
No 441
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=90.82 E-value=0.13 Score=34.77 Aligned_cols=66 Identities=12% Similarity=0.301 Sum_probs=38.5
Q ss_pred eecCeEEEEccCCCCccceeEEeEEccCCeee----ecCc--CCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 20 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI----YLNT--DTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I----~p~~--~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
..|.++.|.|.+..+--..-...+|.+++..+ ++.. +.+|+|.+.. .|.|..++..| ...-.|.++
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s--~L~i~~~~~~d--~g~ytC~v~ 207 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSS--QLTLPATQCLA--GKSVTCHVK 207 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEE--EEEEEGGGSCT--TCEEEEEEE
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEE--EEEECHHHcCC--CCeEEEEEE
Confidence 47999999999875333211346899988443 1211 4578887743 46665554332 233455544
No 442
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=90.78 E-value=0.21 Score=32.75 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc---------CCCceEEEcc--C-c--cEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT---------DTGGKYVVLS--S-G--DLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~---------~~dgKY~vlp--s-G--eL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+.++... -....|.+.. ..++-.. ...+||.+.- + + -|.|++++.+
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 89 (134)
T 1zvh_A 11 SVQAGGSLRLSCAASGYIAS-INYLGWFRQAPGKEREGVAAVSPAGGTPYYADSVKGRFTVSLDNAENTVYLQMNSLKPE 89 (134)
T ss_dssp EECTTCCEEEEEEEEESGGG-EEEEEEEEECTTSCCEEEEEECTTTCCEEECTTTBTTBEEEEETTTTEEEEEECSCCGG
T ss_pred EEccCCCEEEEEEeCCCCcC-CcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCcEEEEEcCCCCEEEEEECCCCHH
Confidence 45589999999997543222 2457898743 1222111 1247898862 2 2 5999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ++=-|.+
T Consensus 90 Ds--G~Y~C~~ 98 (134)
T 1zvh_A 90 DT--ALYYCAA 98 (134)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 64 4444544
No 443
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=90.78 E-value=0.56 Score=30.69 Aligned_cols=60 Identities=8% Similarity=0.275 Sum_probs=38.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc-----CCCceEEEc--cCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT-----DTGGKYVVL--SSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~-----~~dgKY~vl--psG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...... ....|.+.. ..|+-.. ...|||.+. +++ -|.|++++.+|.
T Consensus 20 ~v~~G~~vtL~C~~~~~~~~--~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds 95 (134)
T 3bik_B 20 TVSEGANATFTCSLSNWSED--LMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDS 95 (134)
T ss_dssp EEETTSCEEEEEEESSCCTT--CEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGC
T ss_pred EEeCCCCEEEEEEeCCCCCC--cEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHC
Confidence 34589999999997643222 346898742 2222211 136899884 444 599999987764
No 444
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=90.78 E-value=0.17 Score=35.95 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=42.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecC----cCCCceEEEcc--Cc---cEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLN----TDTGGKYVVLS--SG---DLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~----~~~dgKY~vlp--sG---eL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+..+-.+ -....|++.. ..| +.. ....|||.+.. ++ .|.|++++.+|. +
T Consensus 12 ~v~~G~~vtL~C~~s~~~~~-~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds--g 88 (229)
T 1hxm_A 12 PVSIGVPATLRCSMKGEAIG-NYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDE--G 88 (229)
T ss_dssp EEETTCCEEEEEEECSSCGG-GSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGC--E
T ss_pred EEcCCCCEEEEeEecCCccC-cceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHC--e
Confidence 45689999999998633212 1347898742 223 221 12368999873 22 699999998775 4
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
.-.|.+
T Consensus 89 ~Y~C~~ 94 (229)
T 1hxm_A 89 SYYCAC 94 (229)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444544
No 445
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=90.72 E-value=0.24 Score=31.92 Aligned_cols=69 Identities=12% Similarity=0.074 Sum_probs=39.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc---------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT---------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~---------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|.|.|.+.+.... -....|.+.. ..++-.. ...+||.+.. +.-|.|++++.+
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (127)
T 2x1q_A 11 LVQPGGSLRLSCAASGRTFS-NYRMGWFRQAPGKEREFVATISQSGAATAYADSVKGRFTFSRDNAKNLLYLEMLSLEPE 89 (127)
T ss_dssp EECTTCCEEEEEC------C-CSEEEEEEECTTSCCEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEeCCcccC-CcEEEEEEECCCCCCEEEEEEecCCCceeeCcccCCcEEEEEeCCCCEEEEEEcCCCHH
Confidence 45589999999997643211 1347898753 1222211 1357998863 236999999987
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ++=-|.+.
T Consensus 90 Ds--g~Y~C~~~ 99 (127)
T 2x1q_A 90 DT--AVYYCAAS 99 (127)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEE
Confidence 74 44455543
No 446
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=90.68 E-value=0.036 Score=39.34 Aligned_cols=57 Identities=18% Similarity=0.223 Sum_probs=34.4
Q ss_pred eeecCeEEEEccCCCCc--cceeEEeEEccCCeeeec------CcCCCceEEEccCccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYM--SEYIIVTSWIQDDVNIYL------NTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V--~d~V~V~SW~~Dd~~I~p------~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
|..|.+|.|.|.+..+- ..- ...+|.+++..+.. ....+|+|.. ++.|.|.+++..|
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~s~L~I~~~~~~D 93 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPE-VRFSWFIDDVEVHTAQTHAPEKQSNSTLRS--VSELPIVERDWLN 93 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCC-CEEEEEESSCEECCCEECCCEECTTSCEEE--EEEEECCHHHHHT
T ss_pred cccCCcEEEEEEEecCccCCCC-CEEEEEECCccccCcccccceEcCCCcEEE--EEEEEEEhhHccC
Confidence 66899999999986331 111 25899999844421 1123566643 3456666665544
No 447
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=90.60 E-value=0.14 Score=36.34 Aligned_cols=68 Identities=12% Similarity=0.076 Sum_probs=42.0
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--cCc-------CCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--LNT-------DTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p~~-------~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+...-... ....|.++. ..| + +.. ...+||.+.. ++.|.|++++.+
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~~-~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 227 (264)
T 2gjj_A 149 VVKTGASVKISCKASGYSFTG-YFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSE 227 (264)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEEeCCccCC-eEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcc
Confidence 577899999999986443211 246898762 222 1 110 1257887752 468999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 228 Ds--G~Y~C~a 236 (264)
T 2gjj_A 228 DS--ADYYCVR 236 (264)
T ss_dssp GC--EEEEEEE
T ss_pred cC--EEEEEEE
Confidence 74 3444444
No 448
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=90.55 E-value=0.21 Score=35.82 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=42.6
Q ss_pred ceeecCeEEEEccCCCCccc-e--eEEeEEccCC-----ee-eecC----cCCCceEEEccC---ccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-Y--IIVTSWIQDD-----VN-IYLN----TDTGGKYVVLSS---GDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~--V~V~SW~~Dd-----~~-I~p~----~~~dgKY~vlps---GeL~Ir~v~~~~~n~ 81 (98)
.|..|.++.|.|.+...-.. + -....|.+++ .. ++.. ...++||.+..+ +.|.|++++.+|.
T Consensus 170 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-- 247 (291)
T 2gki_A 170 AVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDL-- 247 (291)
T ss_dssp EEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC--
T ss_pred EEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHC--
Confidence 46789999999998644321 0 0157898852 12 2221 112678987654 4699999998774
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
..-.|.+
T Consensus 248 G~Y~C~a 254 (291)
T 2gki_A 248 AVYYCKQ 254 (291)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3444443
No 449
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=90.49 E-value=0.19 Score=35.77 Aligned_cols=60 Identities=15% Similarity=0.232 Sum_probs=38.9
Q ss_pred ceeecCeEEEEccCCCCc-cceeEEeEEccCC-----e-eeecC---------cCCCceEEEcc-----CccEEEEeEee
Q psy5692 18 NVILGNTAVLRCQIPSYM-SEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVLS-----SGDLYVQIRLS 76 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~ 76 (98)
.|..|.+++|.|.++.+- .+ ....|.+++ . .++.. ....+||.+.. ++.|.|++++.
T Consensus 37 ~v~~G~~v~L~C~~~g~~~~~--~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 114 (282)
T 1qok_A 37 LVRSGTSVKLSCTASGFNIKD--SYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTS 114 (282)
T ss_dssp EEETTCCEEEEEEEESSCGGG--SCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEeCCCeEEEEEeccCCCCCC--ceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCCh
Confidence 567899999999976442 12 236788753 1 11211 12357998864 25799999998
Q ss_pred ecC
Q psy5692 77 ITG 79 (98)
Q Consensus 77 ~~~ 79 (98)
+|.
T Consensus 115 ~Ds 117 (282)
T 1qok_A 115 EDT 117 (282)
T ss_dssp GGC
T ss_pred hhC
Confidence 774
No 450
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=90.43 E-value=0.11 Score=35.48 Aligned_cols=66 Identities=23% Similarity=0.327 Sum_probs=39.9
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeee----ecC-cCCCceEEEccCccEEEEeEeeecCCcceeeeeehH
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI----YLN-TDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVEE 90 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I----~p~-~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~~ 90 (98)
+..|.++.|.|.+..+-.. -...+|.+++..+ ++. .+.+|.|.+ ++.|.|.+++..| ..-.|.+.-
T Consensus 140 ~~~g~~v~L~C~~~g~~P~-p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~---g~Y~C~a~n 210 (225)
T 1op3_H 140 STSGGTAALGCLVKDYFPE-PVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT---QTYICNVNH 210 (225)
T ss_dssp CCCCCEEEEEEEEEEEBSS-CCEEECCTTSCCTTCEECCCEECTTSCEEE--EEEEEEEGGGTTC---CCCCEEEEE
T ss_pred ccCCCcEEEEEEEEeEECC-CeEEEEecCCCcCCeEecCceeCCCCCEEE--EEEEEEechhcCC---CcEEEEEEc
Confidence 4579999999997633111 1367899988432 121 135677765 4568887665433 445566543
No 451
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=90.41 E-value=0.047 Score=39.33 Aligned_cols=68 Identities=19% Similarity=0.233 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----ee-eecC---------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VN-IYLN---------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~-I~p~---------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.+|+|.|.++.+-.. -....|.+.+ .. ++-. ....+||.+.. ++.|.|++++.+
T Consensus 33 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 111 (291)
T 2gki_A 33 LVKPGASVKMSCKASGYTFT-SYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSE 111 (291)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGG
T ss_pred EecCCCCEEEEEeccCCccc-ccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHH
Confidence 56789999999998643211 1246788752 11 2211 12357887763 357999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ..-.|.+
T Consensus 112 Ds--G~Y~C~~ 120 (291)
T 2gki_A 112 DS--AVYYCAR 120 (291)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 75 3344444
No 452
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=90.40 E-value=0.21 Score=31.72 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=41.5
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC---------cCCCceEEEcc--C---ccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVLS--S---GDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vlp--s---GeL~Ir~v~~~~ 78 (98)
|..|.++.|.|.+.+..... ....|.+.. . .++-. ....+||.+.. + --|.|++++.+|
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~-~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (122)
T 1xiw_D 12 VKPGASMKISCKASGYSFTG-YTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSED 90 (122)
T ss_dssp ECTTCCEEEEEEEESSCGGG-EEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EeCCCcEEEEEEeeCcccCC-CEEEEEEECCCCCcEEEEEEeccCCceeeCcccCCcEEEEEecCCCEEEEEECCCCHHH
Confidence 44799999999976432122 457897753 1 22211 11357998862 2 269999999876
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. +.=-|.+.
T Consensus 91 s--g~Y~C~~~ 99 (122)
T 1xiw_D 91 S--AVYYCARS 99 (122)
T ss_dssp C--EEEEEEEE
T ss_pred C--EEEEEEEe
Confidence 4 44555543
No 453
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=90.40 E-value=0.082 Score=36.76 Aligned_cols=55 Identities=11% Similarity=0.124 Sum_probs=32.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEE-ccCc--cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV-LSSG--DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~v-lpsG--eL~Ir~v~~~~~ 79 (98)
.|..|.+++|.|..+.- .....|.+++..+... ..++.. ...+ .|.|.+++..|.
T Consensus 19 ~v~~G~~vtL~C~~~~~----~~~~~W~k~g~~~~~~---~~~~~~~~~~~~~~L~I~~v~~~D~ 76 (218)
T 1uct_A 19 VIPLDGSVKIQCQAIRE----AYLTQLMIIKNSTYRE---IGRRLKFWNETDPEFVIDHMDANKA 76 (218)
T ss_dssp EEETTCCEEEEECCCTT----CSEEEEEEEETTEEEE---CSEECC----CCCEEEECSCCGGGC
T ss_pred ccCCCCCEEEEEEcCCC----CCEEEEEECCCccccc---ccccCCCCcceeeEEEEcccccccC
Confidence 57899999999998642 2346899987444221 111111 1234 677777766553
No 454
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=90.38 E-value=0.16 Score=34.36 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=24.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYL 53 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p 53 (98)
.+..|.++.|.|.+..+-. ...+|.+++..+.+
T Consensus 129 ~v~~G~~v~L~C~~~g~p~---~~v~W~~~~~~~~~ 161 (218)
T 3k0w_A 129 KLMPGSTLVLQCVAVGSPI---PHYQWFKNELPLTH 161 (218)
T ss_dssp EECTTCCEEEECEEEBSSC---CEEEEEETTEECTT
T ss_pred eecCCCcEEEEEEecccCC---CeEEEEECCEECCC
Confidence 5778999999999843322 24799999876643
No 455
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=90.37 E-value=0.16 Score=36.59 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=37.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCc---cEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSG---DLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsG---eL~Ir~v~~~~ 78 (98)
.+..|.++.|.|.+...- .....|.+++..|... ...++.+..+| .|.|.+++..|
T Consensus 111 ~~~~g~~~~l~C~~~g~p---~~~i~W~~~g~~l~~~--~~~~~~~~~~~~~~~L~i~~~~~~d 169 (389)
T 2jll_A 111 YSWEGNPINISCDVKSNP---PASIHWRRDKLVLPAK--NTTNLKTYSTGRKMILEIAPTSDND 169 (389)
T ss_dssp EECTTCCEEEEECEEEES---CCEEEEEETTEESSCT--TCTTEEEEECSSCEEEEECCCSTTS
T ss_pred EeccCCEEEEEEEEEecC---CCeEEEEECCccCCcc--cCceEEEeccCCEEEEEECCCChhh
Confidence 356899999999874332 2457899998766432 22466666544 48888777655
No 456
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=90.32 E-value=0.33 Score=35.11 Aligned_cols=65 Identities=17% Similarity=0.338 Sum_probs=42.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc--CCCceEEEc--c---CccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT--DTGGKYVVL--S---SGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~--~~dgKY~vl--p---sGeL~Ir~v~~~~~n~~~~ 84 (98)
.|..|.++.|.|.+.+. -....|.+.. ..| +-.. ...|||.+. + +.-|.|++++.+|. ++-
T Consensus 14 ~v~~G~svtL~C~~s~~----~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~Ds--G~Y 87 (205)
T 3qjh_A 14 SLHEGTGSALRCNFTTT----MRAVQWFRKNSRGSLINLFYLASGTKENGRLKSAFDSKERYSTLHIRDAQLEDS--GTY 87 (205)
T ss_dssp EEETTCCEEEEEECSSC----EEEEEEEEEC-CCCEEEEEEESSEEEEETTEEEEEETTTTEEEEEECSCCGGGC--EEE
T ss_pred EEeCCCCEEEEEEEECC----cceEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEEeccccccC--eEE
Confidence 35589999999998766 2467898853 222 2211 135789885 3 34699999998874 444
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
-|.+
T Consensus 88 ~Cav 91 (205)
T 3qjh_A 88 FCAA 91 (205)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4544
No 457
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=90.32 E-value=0.22 Score=38.29 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=22.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI 51 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I 51 (98)
-|..|.++.|.|.+..+-. ....|++++..+
T Consensus 59 ~V~~G~~v~L~C~v~g~P~---p~i~W~~~~~~l 89 (423)
T 3qs7_E 59 EVDVSASITLQVLVDAPGN---ISCLWVFKHSSL 89 (423)
T ss_dssp EECSSCCEEEEEECSCCSS---CEEEEEETTEEE
T ss_pred EEecCCcEEEEEEEEcCCC---CeEEEEECCCcc
Confidence 5678999999999876332 235899887443
No 458
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=90.30 E-value=0.09 Score=36.36 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=33.9
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC--------cCCCceEEEccCccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN--------TDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~--------~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
++.|.++.|.|.+..+-..- .-.+|.+++..+.+. .+.+|.|.+ +..|.|..++..|
T Consensus 162 ~~~g~~v~L~C~~~g~~p~~-~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d 226 (252)
T 3bkj_L 162 QLTSGGASVVCFLNNFYPKD-INVKWKIDGSERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYER 226 (252)
T ss_dssp HHHHTEEEEEEEEEEEBSSC-CEEEEEETTEEECSSEEEEECCCCTTTCCEEE--EEEEEEEHHHHHH
T ss_pred hcCCCcEEEEEEEeeEeCCC-cEEEEEECCeecCCCeeeecCcccCCCCCEEE--EEEEEEcchhccC
Confidence 45799999999985322111 136899998665432 124556544 2346666665444
No 459
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=90.11 E-value=0.17 Score=34.02 Aligned_cols=32 Identities=19% Similarity=0.463 Sum_probs=20.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVN 50 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~ 50 (98)
.+..|.++.|.|.+..+-..-+ ..+|.+++..
T Consensus 131 ~~~~g~~v~l~C~~~~~~p~~~-~v~W~~~g~~ 162 (215)
T 3nl4_H 131 GDTPSSTVTLGCLVKGYLPEPV-TVTWNSGTLT 162 (215)
T ss_dssp TCCC--CEEEEEEEEEEBSSCC-EEEEGGGTBC
T ss_pred cccCCCcEEEEEEEeeeeCCCe-EEEEeeCCEE
Confidence 4567999999999865433233 3569998853
No 460
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=90.07 E-value=0.37 Score=31.71 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=37.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEcc----CCeeeecCcCCCceEE---------EccCccEEEEeEeeecCCccee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQ----DDVNIYLNTDTGGKYV---------VLSSGDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~----Dd~~I~p~~~~dgKY~---------vlpsGeL~Ir~v~~~~~n~~~~ 84 (98)
.+..|.++.|.|.+..+-.. ..+|.+ +...+.+. +..+. ...++.|.|.+++.+|. ..-
T Consensus 129 ~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~--G~Y 200 (231)
T 3ojm_B 129 STVVGGDVEFVCKVYSDAQP---HIQWIKHVEKNGSKYGPD---GLPYLKVLKHSGINSSNAEVLALFNVTEADA--GEY 200 (231)
T ss_dssp EEETTCCEEEECCEECSSCC---EEEEEEECCBTTBSBCTT---SCBCEEEEEECSTTCSCTTEEEECSCCGGGC--EEE
T ss_pred EEEeCCcEEEEEEEecCCCC---EEEEEECCCCCCccccCC---CcceEeEecccccccCCccEEEEecCCHHHC--eEE
Confidence 56789999999998654333 578988 44444331 11111 11235588888876663 344
Q ss_pred eeee
Q psy5692 85 KMKV 88 (98)
Q Consensus 85 ~~~~ 88 (98)
.|.+
T Consensus 201 ~C~a 204 (231)
T 3ojm_B 201 ICKV 204 (231)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4543
No 461
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=90.05 E-value=0.075 Score=35.32 Aligned_cols=56 Identities=18% Similarity=0.296 Sum_probs=33.2
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeecC-------cCCCceEEEccCccEEEEeEeee
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLN-------TDTGGKYVVLSSGDLYVQIRLSI 77 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~-------~~~dgKY~vlpsGeL~Ir~v~~~ 77 (98)
+..|.++.|.|.+..+-..- .-.+|.+++..|.+. ...+|.|.+. ..|.|..+...
T Consensus 123 ~~~g~~v~l~C~~~g~~p~~-~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~ 185 (211)
T 3tv3_L 123 ELQANKATLVCLISDFYPGA-VTVAWKADSSPVKAGVETTTPSKQSNNKYAAS--SYLSLTPEQWK 185 (211)
T ss_dssp HHHTTCEEEEEEEEEEBSSC-CEEEEEETTEEECTTEEECCCEECTTSSEEEE--EEEEECHHHHH
T ss_pred hhcCCCeEEEEEeeeecCCC-eEEEEEECCeecCCCcccCCceECCCCCEEEE--EEEEEcHHHhC
Confidence 34699999999975322221 346899998666321 1346677653 23555554433
No 462
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=89.99 E-value=0.26 Score=31.14 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=40.5
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC---------cCCCceEEEc--cC---ccEEEEeEeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVL--SS---GDLYVQIRLSIT 78 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vl--ps---GeL~Ir~v~~~~ 78 (98)
|..|.++.|.|.+.+..... ....|.+.. . .++-. ....+||.+. ++ .-|.|++++.+|
T Consensus 12 ~~~G~~v~L~C~~~~~~~~~-~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 1mfa_H 12 ARPGASVKMSCKASGYTFTN-YWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSLTSED 90 (120)
T ss_dssp ECTTCCEEEEEEEESSCGGG-SEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EeCCCCEEEEEEeeCccccc-cEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 44899999999975432111 347888742 1 22211 1235799886 22 369999999877
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. +.=-|.+
T Consensus 91 s--g~Y~C~~ 98 (120)
T 1mfa_H 91 S--AVYYCTR 98 (120)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 4444544
No 463
>3osk_A Cytotoxic T-lymphocyte protein 4; beta sandwich, homodimer, immunoglobulin superfamily (beta S fold, receptor, signalling, B7-1(CD80), B7-2(CD86); HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 PDB: 2x44_D 1i85_C 1ah1_A* 1i8l_C* 3bx7_C
Probab=89.98 E-value=0.53 Score=30.48 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=40.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC--e----ee--ecCcC----CCce-EEEcc---CccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD--V----NI--YLNTD----TGGK-YVVLS---SGDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd--~----~I--~p~~~----~dgK-Y~vlp---sGeL~Ir~v~~~~~n~ 81 (98)
.|..|.++.|.|...+....-..-..|.+.. . .+ |...+ ..+| |.... +.-|.|++++.+|.
T Consensus 12 ~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~r~f~~~~~~~~~sL~I~~l~~~Ds-- 89 (130)
T 3osk_A 12 LASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDT-- 89 (130)
T ss_dssp ECCTTSCEEEEEEECCCSSCCEEEEEEEEEETTEEEEEEEEEEETTSCCCCCSCCSEEEEEETTEEEEEECSCCGGGC--
T ss_pred EEeCCCeEEEEEEecCCCCCceEEEEEEEeCCCCCcEEEEEEEcCCCceeeecceEEeccCCCCEEEEEEcCCChHHC--
Confidence 3458999999999876532113456788753 1 22 32211 1355 65543 33489999998884
Q ss_pred ceeeeee
Q psy5692 82 SVKKMKV 88 (98)
Q Consensus 82 ~~~~~~~ 88 (98)
++=-|.+
T Consensus 90 g~Y~C~~ 96 (130)
T 3osk_A 90 GLYICKV 96 (130)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4444544
No 464
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=89.93 E-value=1.4 Score=31.14 Aligned_cols=42 Identities=14% Similarity=0.349 Sum_probs=27.5
Q ss_pred EEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCCeeeec
Q psy5692 10 EINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYL 53 (98)
Q Consensus 10 ev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p 53 (98)
.+.+... .+..|.++.|.|.+..+-..- ....|.+|+..|.+
T Consensus 224 ~i~~~~~-~~~~G~~v~l~C~~~g~~p~~-~~v~W~k~g~~l~~ 265 (327)
T 2wng_A 224 TLEVTQQ-PVRAENQVNVTCQVRKFYPQR-LQLTWLENGNVSRT 265 (327)
T ss_dssp EEEEEEE-CCSSTTCCEEEEEEEEEBSSC-EEEEEEETTEEEEE
T ss_pred EEEEecC-CcCCCCcEEEEEEEccccCCC-cEEEEEECCeEccC
Confidence 3444444 477999999999986321111 24679999966644
No 465
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=89.84 E-value=0.29 Score=33.35 Aligned_cols=34 Identities=15% Similarity=0.412 Sum_probs=22.9
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeeeec
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYL 53 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p 53 (98)
+..|.++.|.|.+..|-..- ...+|.+|+..|..
T Consensus 119 ~~~g~~~~L~C~~~g~~P~~-~~v~W~k~g~~l~~ 152 (214)
T 1ow0_A 119 LALNELVTLTCLARGFSPKD-VLVRWLQGSQELPR 152 (214)
T ss_dssp TTSSSEEEEEEEEEEESSSC-CEEEEEETTEECCG
T ss_pred hccCCceEEEEEEeeeECCC-cEEEEEECCEECCC
Confidence 45789999999985432111 25679999866533
No 466
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=89.83 E-value=0.11 Score=44.12 Aligned_cols=55 Identities=18% Similarity=0.180 Sum_probs=39.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
+|..|+++.|.|...| -.+-..|..+...+-. ...+++....|.|+|++++..|.
T Consensus 544 ~v~~g~~~~L~C~~~s----p~a~v~W~~~~~~l~~---~~~~~~~~~~~~LlI~~v~~~Ds 598 (663)
T 1olz_A 544 FFKHGGTAELKCSQKS----NLARVFWKFQNGVLKA---ESPKYGLMGRKNLLIFNLSEGDS 598 (663)
T ss_dssp EEETTSCEEECCCCSC----TTCEEEEEESSSBCCC---CSSSBCCTTTTCEEECSCCGGGC
T ss_pred EEecCCcEEEEccCCC----CCCcEEEEECCeeccc---cCcceEEecCCeEEEEecCcccC
Confidence 7889999999999654 2366699999854422 22345444589999999986653
No 467
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=89.78 E-value=0.45 Score=34.23 Aligned_cols=67 Identities=19% Similarity=0.265 Sum_probs=43.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEc--cC---ccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVL--SS---GDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vl--ps---GeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+...... ...|.+.. ..+|-.. ...|||.+. ++ ..|.|++++.+|. +
T Consensus 12 ~v~~G~svtL~C~~s~~~~~---~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Ds--g 86 (229)
T 2q86_A 12 VVRQGENCVLQCNYSVTPDN---HLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDT--A 86 (229)
T ss_dssp EEETTCCEEEEEEECCSCCS---CEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGC--E
T ss_pred EEecCCCEEEEEEECCCCCc---EEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccC--c
Confidence 34579999999997654322 46898743 1233221 125789885 32 3799999998875 6
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
+=-|.+.
T Consensus 87 ~Y~C~~~ 93 (229)
T 2q86_A 87 TYFCVVG 93 (229)
T ss_dssp EEEEEES
T ss_pred cEEEEEE
Confidence 6666664
No 468
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=89.72 E-value=0.16 Score=32.68 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=41.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-e--cC-------cCCCceEEEcc-----CccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-Y--LN-------TDTGGKYVVLS-----SGDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~--p~-------~~~dgKY~vlp-----sGeL~Ir~v~~~ 77 (98)
.|..|.++.|.|.+.+..... ....|.+.. ..| + .. ....+||.+.. +--|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~~-~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 89 (127)
T 1mqk_H 11 LVQPGGSLKLSCAASGFTFSS-YTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSE 89 (127)
T ss_dssp EECTTCCEEEEEEEESSCGGG-SCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEeCCCccCC-cEEEEEEECCCCCCEEEEEEecCCCcEEcCcccCCCEEEEEeCCCCEEEEEECCCCHH
Confidence 456899999999975432111 246887753 122 2 21 11357998863 235999999887
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ++=-|.+.
T Consensus 90 Ds--g~Y~C~~~ 99 (127)
T 1mqk_H 90 DT--AMYYCVRH 99 (127)
T ss_dssp GC--EEEEEEEE
T ss_pred HC--EEEEEEEe
Confidence 63 44445443
No 469
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=89.63 E-value=0.056 Score=38.13 Aligned_cols=58 Identities=16% Similarity=0.338 Sum_probs=39.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEc--c---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVL--S---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vl--p---sGeL~Ir~v~~~~~ 79 (98)
.|..|.+|.|.|.+.... ....|++.. ..+|-.. ...|||.+. + +..|.|++++.+|.
T Consensus 12 ~v~~G~~v~L~C~~s~~~----~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Ds 84 (207)
T 1ymm_D 12 SIQEGENATMNCSYKTSI----NNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRAADT 84 (207)
T ss_dssp CCSSCCCCCBCCBCSSCE----EEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCSTTC
T ss_pred EEeCCCCEEEEEEecCCC----ceEEEEEECCCCCcEEEEEEcCCCccccCCCEEEEEcCCCCEEEEEECcCCcccC
Confidence 467899999999986443 568998754 1222211 246888885 2 35799999998774
No 470
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=89.63 E-value=0.036 Score=38.60 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=33.2
Q ss_pred ceeecCeEEEEccCCCCc-cceeEEeEEccCCeee-ec-----CcCCCceEEEccCccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYM-SEYIIVTSWIQDDVNI-YL-----NTDTGGKYVVLSSGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd~~I-~p-----~~~~dgKY~vlpsGeL~Ir~v~~~~ 78 (98)
.+..|.+++|.|.+..|- ++ -...+|.+++..+ .. ....+|.|.. ++.|.|.+++.+|
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~-p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~--~s~L~I~~~~~~D 88 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDS-SLSVTWTREKSGNLRPDPMVLQEHFNGTYSA--SSAVPVSTQDWLS 88 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCT-TCEEEEECSSSSCCCCCCCEEEECTTSCEEE--EEEEECCHHHHHT
T ss_pred hcccCCceEEEEEEeCccCCC-CeEEEEEcCCeeccccccccceECCCCcEEE--EEEEEecchhccC
Confidence 356899999999976431 11 0257899887443 11 1124566642 3346666555433
No 471
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=89.57 E-value=0.35 Score=33.31 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=38.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccC---C--e-eeecC----cCCCceEEEccCc---cEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQD---D--V-NIYLN----TDTGGKYVVLSSG---DLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~D---d--~-~I~p~----~~~dgKY~vlpsG---eL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+......+ ...|++. . . .++.. ....+||.+..++ .|.|++++.+|.
T Consensus 152 ~v~~G~~v~L~C~~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 224 (257)
T 3gkz_A 152 SASPGEKVTLTCSASSSVSSS--HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDA 224 (257)
T ss_dssp EECTTCCEEEEEEESSCCCGG--GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCCcEEEEEEEccCccce--EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHC
Confidence 567899999999986543331 4578763 1 2 22211 1124788876543 499999998774
No 472
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=89.55 E-value=0.54 Score=28.89 Aligned_cols=53 Identities=8% Similarity=0.063 Sum_probs=34.6
Q ss_pred eecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceE----EEcc----CccEEEEeEeeecC
Q psy5692 20 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKY----VVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 20 irGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY----~vlp----sGeL~Ir~v~~~~~ 79 (98)
..|..+.|.|.+..+-.- ..+|.+++..|.++ +++ .... +|.|.|++++.+|.
T Consensus 14 ~~~~~~~~~c~v~G~P~P---~i~W~k~g~~l~~~----~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 74 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKP---ALQWFYNGAILNES----KYICTKIHVTNHTEYHGCLQLDNPTHMNN 74 (103)
T ss_dssp CCCCEEEEEEEEECSSCC---EEEEEETTEEECCC----SSEEEEEEEECSSEEEEEEEEESCCGGGC
T ss_pred eECcEEEEEEEEEEeCCC---EEEEEECCEECCCC----CcEeEEEEecCCcEEEEEEEECCCCcccC
Confidence 367789999987444333 46899999777542 232 2112 34499999988764
No 473
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=89.52 E-value=0.31 Score=31.53 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=40.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc--------CCCceEEEccC-----ccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT--------DTGGKYVVLSS-----GDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~--------~~dgKY~vlps-----GeL~Ir~v~~~~ 78 (98)
.|..|.+|.|.|........ -....|.+.. . .++-.. ...+||.+..+ .-|.|++++.+|
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~D 89 (127)
T 1kxt_B 11 SVQAGGSLRLSCAASGYTFS-SYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRDNAANTAYLQMDSLKPED 89 (127)
T ss_dssp ECCTTCCEEEEEEEC--CCS-SSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEECSSSSEEEEEECSCCGGG
T ss_pred EEeCCCCEEEEeEecCCCcc-ceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEeCCCCEEEEEECcCCHHH
Confidence 45589999999997633211 1247888742 2 222111 23579988632 359999999876
Q ss_pred CCcceeeeeeh
Q psy5692 79 GNLSVKKMKVE 89 (98)
Q Consensus 79 ~n~~~~~~~~~ 89 (98)
. ++=-|.+.
T Consensus 90 s--g~Y~C~~~ 98 (127)
T 1kxt_B 90 T--AVYYCAAG 98 (127)
T ss_dssp C--EEEEEEEC
T ss_pred C--EEEEEEEE
Confidence 3 44445443
No 474
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=89.46 E-value=0.26 Score=33.54 Aligned_cols=50 Identities=18% Similarity=0.223 Sum_probs=31.5
Q ss_pred ecCeEEEEccCCCCccceeEEeEEccCC-eeeecCcCCCceEEEc-cCccEEEEeEeeecC
Q psy5692 21 LGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYVVL-SSGDLYVQIRLSITG 79 (98)
Q Consensus 21 rGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~~~dgKY~vl-psGeL~Ir~v~~~~~ 79 (98)
.|.++.|.|.+..+-. .. .+|.++. ..+ .|+.... ..+.|.|++++.+|+
T Consensus 15 ~G~~v~L~C~~~g~P~--p~-i~W~~~~~~~~------~~~~~~~~~~~~L~I~~v~~~D~ 66 (202)
T 1vca_A 15 IGDSVSLTCSTTGCES--PF-FSWRTQIDSPL------NGKVTNEGTTSTLTMNPVSFGNE 66 (202)
T ss_dssp TTSCEEEEEEEESCSS--CE-EEEEETTCCCC------SSEEEEETTEEEEEESSCCGGGC
T ss_pred CCCcEEEEEeecCCCC--Ce-EEEECCCCCCc------cceEEEcCCccEEEECcCCHHHC
Confidence 8999999999753332 22 6898743 211 2343332 345688888887764
No 475
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=89.41 E-value=0.31 Score=32.28 Aligned_cols=66 Identities=9% Similarity=0.147 Sum_probs=38.1
Q ss_pred eeecCeE-EEEccC-CCCccceeEEeEEccCCeeeecCcCCCceEEEccC------------ccEEEEeEeeecCCccee
Q psy5692 19 VILGNTA-VLRCQI-PSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS------------GDLYVQIRLSITGNLSVK 84 (98)
Q Consensus 19 VirGNtA-VLkC~I-Ps~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlps------------GeL~Ir~v~~~~~n~~~~ 84 (98)
+..|.++ .|.|.+ .++-.. ..+|.+++..|.+.....+++.+..+ +.|.|. +..+| +...-
T Consensus 130 ~~~g~~~~~l~C~~~~~~p~p---~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~-~~~~d-d~g~Y 204 (231)
T 2pet_A 130 VMEDSAQEIATCNSRNGNPAP---KITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLR-LRKDD-RDASF 204 (231)
T ss_dssp TTCCSEEEEEEEEEEEEBSCC---EEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEE-CCGGG-GGCEE
T ss_pred ecCCCceEEEEEEeECcccCC---EEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEe-cchhh-CCceE
Confidence 5578877 999998 322222 35899999777554333346655432 456665 33333 23445
Q ss_pred eeeeh
Q psy5692 85 KMKVE 89 (98)
Q Consensus 85 ~~~~~ 89 (98)
.|.+.
T Consensus 205 ~C~a~ 209 (231)
T 2pet_A 205 HCAAH 209 (231)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 56554
No 476
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=89.30 E-value=0.44 Score=33.39 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=38.9
Q ss_pred ceeecCeEEEEccCCCCccc-e-eEEeEEcc--CCee----eecC----cCCCceEEEcc---CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSE-Y-IIVTSWIQ--DDVN----IYLN----TDTGGKYVVLS---SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d-~-V~V~SW~~--Dd~~----I~p~----~~~dgKY~vlp---sGeL~Ir~v~~~~~ 79 (98)
.|..|.++.|.|.+...-.. + -....|.+ ++.. ++.. ....+||.+.. ++.|.|++++.+|.
T Consensus 132 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 208 (256)
T 1nqb_A 132 PVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 208 (256)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHC
Confidence 46789999999998654322 0 01458998 4321 2211 12357888754 45699999998774
No 477
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=89.25 E-value=0.31 Score=34.34 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=42.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecCc-----CCCceEEEc--cC---ccEEEEeEeeecCCc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLNT-----DTGGKYVVL--SS---GDLYVQIRLSITGNL 81 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~~-----~~dgKY~vl--ps---GeL~Ir~v~~~~~n~ 81 (98)
.|..|.+|.|.|.......+ ....|++.. . .+|-.. ...|||.+. ++ .-|.|++++.+|.
T Consensus 14 ~v~~G~~vtL~C~~s~~~~~--~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds-- 89 (211)
T 2ak4_D 14 SVVEKEDVTLDCVYETRDTT--YYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDS-- 89 (211)
T ss_dssp EEETTCCEEECCEEECSCSS--CEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCCGGGC--
T ss_pred EEecCCCEEEEEEecCCcCc--eeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccccccC--
Confidence 35589999999998544333 257898753 1 233211 135899885 32 3699999988764
Q ss_pred ceeeeeeh
Q psy5692 82 SVKKMKVE 89 (98)
Q Consensus 82 ~~~~~~~~ 89 (98)
++=.|.+.
T Consensus 90 g~Y~C~~~ 97 (211)
T 2ak4_D 90 AVYFCALS 97 (211)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEE
Confidence 44445443
No 478
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=89.25 E-value=0.6 Score=33.16 Aligned_cols=66 Identities=9% Similarity=0.110 Sum_probs=42.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC------eeeecCc----CCCceEEEc--cC---ccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVL--SS---GDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vl--ps---GeL~Ir~v~~~~~n~~ 82 (98)
.|..|.+|.|.|.+ +.-. ....|++.. ..+|-.. ...|||.+. ++ -.|.|++++.+|. +
T Consensus 12 ~v~~G~~vtL~C~~-~~~~---~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v~~~Ds--g 85 (215)
T 1oga_D 12 SIQEGENLTVYCNS-SSVF---SSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGDT--G 85 (215)
T ss_dssp EEETTCCEEEEEEC-SSCC---SCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGGC--E
T ss_pred EEecCCCEEEEEEE-cCCC---ceEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccCCcccC--c
Confidence 45689999999997 3322 236898753 2333322 125899886 22 3699999998875 6
Q ss_pred eeeeeeh
Q psy5692 83 VKKMKVE 89 (98)
Q Consensus 83 ~~~~~~~ 89 (98)
+-.|.+.
T Consensus 86 ~Y~C~~~ 92 (215)
T 1oga_D 86 LYLCAGA 92 (215)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 6666654
No 479
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=89.17 E-value=0.098 Score=33.75 Aligned_cols=68 Identities=12% Similarity=0.058 Sum_probs=40.5
Q ss_pred ceeecCeEEEEccCCCCc-cceeEEeEEccCC------eeeecC--------cCCCceEEEcc---C--ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYM-SEYIIVTSWIQDD------VNIYLN--------TDTGGKYVVLS---S--GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd------~~I~p~--------~~~dgKY~vlp---s--GeL~Ir~v~~~ 77 (98)
.|..|.+++|.|.+.+.. .++ ....|.+.. ..++-. ....+||.+.. . .-|.|++++.+
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~~~-~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~ 89 (127)
T 3cx5_J 11 LVQPSQSLSLTCSVTGYSITSG-YYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTE 89 (127)
T ss_dssp EECTTSCEEEEEEEESSCTTTS-SEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEEeCcccCCC-cEEEEEEECCCCCcEEEEEEeCCCCeeECcccCCcEEEEEeCCCCEEEEEECCCCHH
Confidence 455899999999975432 231 347887742 122211 11247887752 2 36999999987
Q ss_pred cCCcceeeeee
Q psy5692 78 TGNLSVKKMKV 88 (98)
Q Consensus 78 ~~n~~~~~~~~ 88 (98)
|. ++=-|.+
T Consensus 90 Ds--g~Y~C~~ 98 (127)
T 3cx5_J 90 DT--ATYYCAR 98 (127)
T ss_dssp GC--EEEEEEE
T ss_pred HC--EEEEEEE
Confidence 63 4444444
No 480
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=89.12 E-value=0.19 Score=35.11 Aligned_cols=65 Identities=12% Similarity=0.228 Sum_probs=36.1
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEccCCeee----ecCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI----YLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I----~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
+..|.++.|.|.+..|-..-+ ..+|.+++..+ ++....+|+|.+. +.|.|..++..| ..-.|.++
T Consensus 136 ~~~g~~v~L~C~~~g~~P~~~-~v~W~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d---g~ytC~v~ 204 (253)
T 3liz_H 136 AQTNSMVTLGCLVKGYFPEPV-TVTWNSGSLSSGVHTFPAVLQSDLYTLS--SSVTVPSSTWPS---ETVTCNVA 204 (253)
T ss_dssp ---CCEEEEEEEEEEEBSSCC-EEEEGGGTBCTTEEECCCEEETTEEEEE--EEEEEETTSTTT---SCCEEEEE
T ss_pred cCCCCcEEEEEEEeeEeCCCe-EEEEEeCCeecceEeCCccccCCeEEEE--EEEEEcHHHCCC---ceEEEEEE
Confidence 567999999999875333322 45899987421 1111113788764 567776665433 23345544
No 481
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=89.10 E-value=0.36 Score=36.27 Aligned_cols=59 Identities=15% Similarity=0.267 Sum_probs=35.7
Q ss_pred eeecCeEEEEccCCCCc-cceeEEeEEccCCeeee------cCcCCCceEEEccCccEEEEeEeeecC
Q psy5692 19 VILGNTAVLRCQIPSYM-SEYIIVTSWIQDDVNIY------LNTDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V-~d~V~V~SW~~Dd~~I~------p~~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
+..|.+|.|.|.+..+- ..-....+|.+++..+. +....+|+|.. +..|.|..++.+|+
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~s~L~I~~~~~~D~ 245 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRS--VSELPIMHQDWLNG 245 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEE--EEEEEechHhccCC
Confidence 67899999999986441 01123589999984331 11224566654 33577766665553
No 482
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=89.06 E-value=0.2 Score=36.42 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=36.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEEeEeeecCC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQIRLSITGN 80 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n 80 (98)
.|..|.++.|.|.. +.-.. ....+|...+..+ +..+.....+.|.|.|++.+|+-
T Consensus 18 ~v~~G~sv~L~C~a-~~p~P-~~~i~W~~~~~~l------~~~~~~~~~~~L~I~~v~~~d~G 72 (210)
T 1gsm_A 18 AVALGASRQLTCRL-ACADR-GASVQWRGLDTSL------GAVQSDTGRSVLTVRNASLSAAG 72 (210)
T ss_dssp EEETTCCEEEEEEE-CCSST-TCEEEEESSTTTT------CCEEEESSEEEEEECSCCGGGCE
T ss_pred EEeCCCCEEEEEEC-CCCCC-CcceEEeeccccc------CcEEecCCccEEEECccCcccCc
Confidence 67899999999997 33222 2378899866332 22333334567899999887764
No 483
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=88.97 E-value=0.32 Score=31.15 Aligned_cols=79 Identities=14% Similarity=0.176 Sum_probs=45.8
Q ss_pred cceeeeceEEEEeeeeceeecCeEEEEccCCCC-ccceeEEeEEccCC------eeeecCc----CCCceEEEc--c-Cc
Q psy5692 2 LPVVKQKYEINVNYEHNVILGNTAVLRCQIPSY-MSEYIIVTSWIQDD------VNIYLNT----DTGGKYVVL--S-SG 67 (98)
Q Consensus 2 rAVV~Q~Yev~V~d~~~VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd------~~I~p~~----~~dgKY~vl--p-sG 67 (98)
||.|.+|=.+ .|..|.+++|.|...+. .... ....|.+.. ..++-.. ...||+.+. + .|
T Consensus 1 ~~~v~~p~~v------~~~~G~~vtL~C~~s~~~~~~~-~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~ 73 (117)
T 1xed_A 1 KSPIFGPEEV------NSVEGNSVSITCYYPPTSVNRH-TRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENG 73 (117)
T ss_dssp -CCSBCCSEE------EEETTCCEEEEEECCCCHHHHH-SCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTT
T ss_pred CCceeCCCeE------EEecCCCEEEEeEecCCcCCCC-ceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCC
Confidence 4566666332 34489999999998643 1111 236888764 1233221 246888875 2 23
Q ss_pred --cEEEEeEeeecCCcceeeeeeh
Q psy5692 68 --DLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 68 --eL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
-|.|++++.+|. +.=-|.+.
T Consensus 74 ~~sL~I~~l~~~Ds--G~Y~C~v~ 95 (117)
T 1xed_A 74 TFVVNIAQLSQDDS--GRYKCGLG 95 (117)
T ss_dssp EEEEEECSCCGGGC--EEEEEEES
T ss_pred EEEEEECCCChHHC--EEEEEEEE
Confidence 488999988773 44445443
No 484
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=88.91 E-value=0.45 Score=29.42 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=33.2
Q ss_pred CeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEc-------cCccEEEEeEeeecC
Q psy5692 23 NTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVL-------SSGDLYVQIRLSITG 79 (98)
Q Consensus 23 NtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vl-------psGeL~Ir~v~~~~~ 79 (98)
..+.|.|.+...-.- ...|.+++..|.. +.++.+. .+|.|.|++++..|.
T Consensus 21 ~~~~l~C~~~g~P~p---~i~W~k~g~~l~~----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 77 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPP---TLHWLHNGQPLRE----SKIIHVEYYQEGEISEGCLLFNKPTHYNN 77 (118)
T ss_dssp CEEEEEEEEECSSCC---EEEEEETTEECCC----SSSEEEEEEECSSEEEEEEEEESCCGGGC
T ss_pred cceEEEEEeeeeCCC---eEEEEECCEECCC----CCceeEEEeccCccccEEEEECCCChhcC
Confidence 557899987543332 4689999977644 2333332 467899999887764
No 485
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=88.87 E-value=0.51 Score=31.25 Aligned_cols=69 Identities=12% Similarity=0.142 Sum_probs=40.7
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----e-eeecC---------cCCCceEEEcc---C--ccEEEEeEeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----V-NIYLN---------TDTGGKYVVLS---S--GDLYVQIRLSI 77 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~-~I~p~---------~~~dgKY~vlp---s--GeL~Ir~v~~~ 77 (98)
.|..|.++.|.|...++... -....|.+.. . .++-. ....+||.+.. . --|.|++++.+
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 89 (137)
T 1rjc_A 11 SVQAGQSLRLSCATSGATSS-SNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSLKPE 89 (137)
T ss_dssp EECTTCCEEEEEECC-CTTT-CSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEEC--CEEEEEECSCCGG
T ss_pred EEecCCCEEEEEEecCCcCC-CcEEEEEEECCCCCCEEEEEEECCCCceecCcccCCcEEEEEcCCCCEEEEEECCCCHH
Confidence 45589999999998643212 1346788743 1 22211 11357998863 2 25999999877
Q ss_pred cCCcceeeeeeh
Q psy5692 78 TGNLSVKKMKVE 89 (98)
Q Consensus 78 ~~n~~~~~~~~~ 89 (98)
|. ++=-|.+.
T Consensus 90 Ds--g~Y~C~~~ 99 (137)
T 1rjc_A 90 DT--AMYYCAAD 99 (137)
T ss_dssp GC--EEEEEEEC
T ss_pred HC--EEEEEEEE
Confidence 63 44455543
No 486
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=88.80 E-value=0.33 Score=33.60 Aligned_cols=67 Identities=12% Similarity=0.094 Sum_probs=40.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeec-C----cCCCceEEEcc-----CccEEEEeEeeecCCcc
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYL-N----TDTGGKYVVLS-----SGDLYVQIRLSITGNLS 82 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p-~----~~~dgKY~vlp-----sGeL~Ir~v~~~~~n~~ 82 (98)
.|..|.++.|.|....... .....|.+.+ ..++. . ....+||.+.. ++.|.|++++.+|. .
T Consensus 147 ~v~~G~~v~L~C~~~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds--G 222 (259)
T 3omz_A 147 SMPVRKAVTLNCLYETSWW--SYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDS--A 222 (259)
T ss_dssp EEETTCCEEECCEEECCCS--SCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGC--S
T ss_pred EEcCCCCEEEEEECCCccC--CceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHC--E
Confidence 4678999999997643222 2346788742 11211 0 11257898873 24599999998774 3
Q ss_pred eeeeee
Q psy5692 83 VKKMKV 88 (98)
Q Consensus 83 ~~~~~~ 88 (98)
.--|.+
T Consensus 223 ~Y~C~~ 228 (259)
T 3omz_A 223 KYFCAL 228 (259)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 334444
No 487
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=88.73 E-value=0.29 Score=31.36 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=41.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----ee-eec------C--------cCCCceEEEcc--C---ccEEEE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VN-IYL------N--------TDTGGKYVVLS--S---GDLYVQ 72 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~-I~p------~--------~~~dgKY~vlp--s---GeL~Ir 72 (98)
.|..|.+|+|.|.+.+.... -....|.+.. .. ++- + ....+||.+.. + .-|.|+
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~ 89 (127)
T 1i3u_A 11 LVQAGDSLKLSCEASGDSIG-TYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVSRDNAKNTVNLQMN 89 (127)
T ss_dssp ECCTTCCEEEEEEEESSCGG-GSEEEEEEECTTSCCEEEEEEEEEESSSSCEEEEECTTTBTTEEEEEEGGGTEEEEEEC
T ss_pred EEeCCCcEEEEEEecCCCcC-CcEEEEEEECCCCCcEEEEEEEeccccCCCcceeeCcccCCeEEEEEcCCCCEEEEEEC
Confidence 45589999999997543212 1347887642 12 221 0 11357998863 2 269999
Q ss_pred eEeeecCCcceeeeeeh
Q psy5692 73 IRLSITGNLSVKKMKVE 89 (98)
Q Consensus 73 ~v~~~~~n~~~~~~~~~ 89 (98)
+++.+|. ++=-|.+.
T Consensus 90 ~~~~~Ds--g~Y~C~~~ 104 (127)
T 1i3u_A 90 SLKPEDT--AVYYCAAK 104 (127)
T ss_dssp SCCGGGC--EEEEEEEE
T ss_pred CCChhhC--EEEEEEEE
Confidence 9998774 44445443
No 488
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=88.71 E-value=0.27 Score=36.97 Aligned_cols=59 Identities=22% Similarity=0.337 Sum_probs=36.8
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee----ecC-cCCCceEEEccCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI----YLN-TDTGGKYVVLSSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I----~p~-~~~dgKY~vlpsGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+..+--. ....+|.+++..+ ++. .+.+|+|.+. +.|.|.+++..||
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~dG 206 (457)
T 1hzh_H 143 KSTSGGTAALGCLVKDYFPE-PVTVSWNSGALTSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGTQ 206 (457)
T ss_dssp CCCTTCCEEEEEEEESBBSC-CCEEEETTTTBCTTEEEEEEEECTTSCEEEE--EEEEECSGGGGTS
T ss_pred cccCCCcEEEEEEEeEEeCC-CeEEEEEeCCEeccceEcCceECCCCCEEEE--EEEEecccccCCc
Confidence 35789999999998643111 1346899998432 221 2356777553 4688877776553
No 489
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=88.60 E-value=0.15 Score=34.57 Aligned_cols=60 Identities=7% Similarity=0.077 Sum_probs=35.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-eeeecCcCCCceEEEc---------cCccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYVVL---------SSGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-~~I~p~~~~dgKY~vl---------psGeL~Ir~v~~~~~ 79 (98)
.|..|.+|+|.|.+...--.-.-...|+++. ..+-. ..+.++.+. -++.|.|+++...|.
T Consensus 18 ~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 18 TVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLAS--KAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp EEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHH--HTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred EEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCC--CCCceEEEccccccccccceEEEEEccCCcccC
Confidence 5678999999998631000012356799975 22211 113444442 147899999988775
No 490
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=88.57 E-value=0.42 Score=31.32 Aligned_cols=59 Identities=15% Similarity=0.275 Sum_probs=37.1
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC---------eeeecCc---------C--CCceEEE-ccCc---cEEEEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD---------VNIYLNT---------D--TGGKYVV-LSSG---DLYVQI 73 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd---------~~I~p~~---------~--~dgKY~v-lpsG---eL~Ir~ 73 (98)
.|-.|.++.|.|.+..+.. ....|++-. ..+|-.. + ..+||.+ ..++ -|.|.+
T Consensus 15 ~v~~G~~vtL~C~~s~~~~---~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~~~~~L~I~~ 91 (128)
T 1nez_G 15 DAELGQKVDLVCEVLGSVS---QGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNK 91 (128)
T ss_dssp EECTTCCEEEEEEEESCCS---SCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETTTEEEEEESS
T ss_pred EEcCCCCEEEEEEeCccCC---CcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCCCEEEEEECC
Confidence 3558999999999754432 237898742 1223211 1 1378888 5444 589999
Q ss_pred EeeecC
Q psy5692 74 RLSITG 79 (98)
Q Consensus 74 v~~~~~ 79 (98)
++.+|.
T Consensus 92 ~~~~Ds 97 (128)
T 1nez_G 92 FSKENE 97 (128)
T ss_dssp CCGGGC
T ss_pred CCHHHC
Confidence 998764
No 491
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=88.43 E-value=0.29 Score=33.58 Aligned_cols=55 Identities=16% Similarity=0.136 Sum_probs=32.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeee-ecCcCCCceEEEccCccEEEEeEeeecCCcceeeeee
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNI-YLNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKV 88 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I-~p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~ 88 (98)
.|..|.++.|.|.+.. -.+|..+.... ..... ..++.|.|.+++..|. ..-.|.+
T Consensus 15 ~v~~G~~v~L~C~~~~-------~v~W~~~~~~~~~~~~~-------~~~~~L~i~~~~~~d~--G~Y~C~~ 70 (289)
T 3ejj_X 15 VVEPGETVTLRCVSNG-------SVEWDGPISPYWTLDPE-------SPGSTLTTRNATFKNT--GTYRCTE 70 (289)
T ss_dssp EECTTCCEEEEEECSS-------CCEEECSCSSSSEECCC-------SSCCEEEESSCCGGGC--EEEEEEC
T ss_pred EECCCCCEEEEEEeCC-------cEEEccCCCceEEEecc-------CCccEEEEeeeccccC--EEEEEEE
Confidence 4668999999999875 27899775211 11111 1236677777776653 3344543
No 492
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=88.36 E-value=0.13 Score=34.09 Aligned_cols=45 Identities=20% Similarity=0.434 Sum_probs=25.2
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCc------CCCceEEE
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNT------DTGGKYVV 63 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~------~~dgKY~v 63 (98)
.++.|.++.|.|.+..+-..- ...+|.+++..|.+.. ..+|.|.+
T Consensus 132 ~~~~~~~v~L~C~~~g~~p~~-~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~ 182 (218)
T 3s96_B 132 EELKENKATLVCLISNFSPSG-VTVAWKANGTPITQGVDTSNPTKEGNKFMA 182 (218)
T ss_dssp HHHHTTEEEEEEEEEEEBSSC-CEEEEEETTEEC--------------CEEE
T ss_pred ccccCCcEEEEEEECcccCCC-eEEEEEECCEECcCceecCcccccCCcEEE
Confidence 346789999999975322121 2468999987664411 12666765
No 493
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=88.32 E-value=0.28 Score=33.49 Aligned_cols=68 Identities=19% Similarity=0.310 Sum_probs=37.6
Q ss_pred eeecCeEEEEccCCCCccceeEEeEEcc-CCeeee-----cCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSYMSEYIIVTSWIQ-DDVNIY-----LNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~V~d~V~V~SW~~-Dd~~I~-----p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
+..|.++.|.|.+..+-.. -...+|.+ |+..|. |....+|+|.+. ..|.|............-.|.++
T Consensus 138 ~~~g~~v~L~C~~~g~~P~-p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~~~d~g~y~C~v~ 211 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPD-SITFSWKYKNNSDISSTRGFPSVLRGGKYAAT--SQVLLPSKDVAQGTNEHVVCKVQ 211 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSS-CCEEEEEETTSCBCSCEEECCCEEETTEEEEE--EEEEEECTTTTSTTCCEEEEEEE
T ss_pred cCCCCcEEEEEEEEEEeCC-CeEEEeEccCCCccceeEECCccccCCeEEEE--EEEEEcHHHhccCCCCEEEEEEE
Confidence 4589999999998633111 12578999 665442 222235788763 45666433210022344566654
No 494
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=88.31 E-value=0.52 Score=30.47 Aligned_cols=68 Identities=12% Similarity=0.215 Sum_probs=40.9
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eee-ecCc--------CCCceEEEcc-----CccEEEEeEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNI-YLNT--------DTGGKYVVLS-----SGDLYVQIRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I-~p~~--------~~dgKY~vlp-----sGeL~Ir~v~~~~ 78 (98)
.|..|.++.|.|.+.++-.. -....|.+.. ..| +-.. ...|||.+.- +.-|.|++++.+|
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~D 89 (124)
T 1yc7_A 11 SVQAGGSLRLSCAVSGSTYS-PCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQRED 89 (124)
T ss_dssp EECTTCCEEEEEEEESCCSS-CEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEecCCCEEEEEEEeCCCcC-CCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCHHH
Confidence 45589999999997543212 2457898743 222 1111 1247898863 2358999999877
Q ss_pred CCcceeeeee
Q psy5692 79 GNLSVKKMKV 88 (98)
Q Consensus 79 ~n~~~~~~~~ 88 (98)
. ++=-|.+
T Consensus 90 s--g~Y~C~~ 97 (124)
T 1yc7_A 90 T--GMYYCQI 97 (124)
T ss_dssp C--EEEEEEE
T ss_pred C--EEEEEEE
Confidence 4 4444444
No 495
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=88.31 E-value=0.14 Score=34.48 Aligned_cols=64 Identities=13% Similarity=0.179 Sum_probs=37.6
Q ss_pred eeecCeEEEEccCCCC-ccceeEEeEEccCCeeee----cCcCCCceEEEccCccEEEEeEeeecCCcceeeeeeh
Q psy5692 19 VILGNTAVLRCQIPSY-MSEYIIVTSWIQDDVNIY----LNTDTGGKYVVLSSGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 19 VirGNtAVLkC~IPs~-V~d~V~V~SW~~Dd~~I~----p~~~~dgKY~vlpsGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
+..|.++.|.|.+..+ -+. ...+|.+++..+. +....+|.|.+ ++.|.|.+++..| ..-.|.+.
T Consensus 139 ~~~g~~v~L~C~~~g~~P~p--~~v~W~~~g~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d---g~y~C~a~ 207 (222)
T 1q9r_B 139 AQTNSMVTLGCLVKGYFPEP--VTVTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVPSSTWPS---ETVTCNVA 207 (222)
T ss_dssp CCCSSEEEEEEEEEEEBSSC--CEEEEGGGTBCTTEEEEEEEEETTEEEE--EEEEEEETTTTTT---SCCEEEEE
T ss_pred ccCCCcEEEEEEEccEECCC--CEEEEecCCeEcceEeccccccCCcEEE--EEEEEECchhcCC---CeEEEEEE
Confidence 5579999999998633 221 2568999974331 11112446655 3467777665444 33456554
No 496
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=88.15 E-value=0.47 Score=35.41 Aligned_cols=36 Identities=22% Similarity=0.534 Sum_probs=26.3
Q ss_pred ceEEEEeeeeceeecCeEEEEccCCCCccceeEEeEEccCCe
Q psy5692 8 KYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDV 49 (98)
Q Consensus 8 ~Yev~V~d~~~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~ 49 (98)
.|-+++.-. -+++|.+|+|.|.+.+ .+ -..|..++.
T Consensus 8 ~~v~~~~~~-~~~~G~~v~l~C~~~~--~~---~i~W~~~~~ 43 (306)
T 3d85_D 8 VYVVELDWY-PDAPGEMVVLTCDTPE--ED---GITWTLDQS 43 (306)
T ss_dssp EEEEEEECC-SSCCCEEEEEECSSSC--CS---SCEEEETTC
T ss_pred cEEEeCCcc-cCccCCcEEEECCCCC--CC---cCEEEECCc
Confidence 356677654 6889999999999762 22 467998874
No 497
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=88.09 E-value=0.27 Score=33.76 Aligned_cols=54 Identities=19% Similarity=0.133 Sum_probs=34.4
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEcc---CccEEEEeEeeecCCcceeeeeeh
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLS---SGDLYVQIRLSITGNLSVKKMKVE 89 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlp---sGeL~Ir~v~~~~~n~~~~~~~~~ 89 (98)
.|..|.++.|.|.+... .+|..+.. .++.+.. ++.|.|++++..|. ..-.|.+.
T Consensus 15 ~v~~G~~v~L~C~~~~~-------v~W~~~~~---------~~~~~~~~~~~~~L~i~~~~~~d~--G~Y~C~~~ 71 (292)
T 4dkd_C 15 VVKPGATVTLRCVGNGS-------VEWDGPPS---------PHWTLYSDGSSSILSTNNATFQNT--GTYRCTEP 71 (292)
T ss_dssp EECTTCCEEEEEECSSC-------CCBCCCCC---------SSCEECCBTTEEEEEESSCCGGGC--SCEEECCC
T ss_pred EEcCCCcEEEEEcCCCc-------eEEccCCC---------CceEEeccCceEEEEEcccccccC--EEEEEEEc
Confidence 56789999999998753 78986541 1222322 34788888777663 33455443
No 498
>3dmm_C T-cell surface glycoprotein CD8 alpha chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=88.04 E-value=0.58 Score=32.92 Aligned_cols=59 Identities=15% Similarity=0.334 Sum_probs=37.5
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC---------eeeecCc---------C--CCceEEEccCcc----EEEEe
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD---------VNIYLNT---------D--TGGKYVVLSSGD----LYVQI 73 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd---------~~I~p~~---------~--~dgKY~vlpsGe----L~Ir~ 73 (98)
.|-.|-++.|.|.+.++-.. ...|++-. ..||-.. . ..+||.+.-++. |.|++
T Consensus 20 ~v~~G~sVtL~C~~s~~~~~---~v~WyrQ~pg~~~~~p~~Li~~~~~~~~~~y~~~~~~~~Rfs~s~~~~~~~sL~I~~ 96 (166)
T 3dmm_C 20 DAELGQKVDLVCEVLGSVSQ---GCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNK 96 (166)
T ss_dssp CCCTTCCEEEEEEEESSSCC---EEEEEEEETTCSCCSCEEEEEEESSSCCEEECGGGSSCCSEEEECSTTTEEEEEESS
T ss_pred EEcCCCCEEEEEEEeCCCCc---eEEEEEECCCCCCCCcEEEEEEeCCCCceeeccccccccceEEEcCCCCEEEEEECC
Confidence 46689999999997533222 45787532 2233211 1 267898864332 99999
Q ss_pred EeeecC
Q psy5692 74 RLSITG 79 (98)
Q Consensus 74 v~~~~~ 79 (98)
++.+|.
T Consensus 97 vq~eDs 102 (166)
T 3dmm_C 97 FSKENE 102 (166)
T ss_dssp CCTTTC
T ss_pred CChhhC
Confidence 998774
No 499
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=87.95 E-value=0.24 Score=34.84 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=34.3
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCCeeeecCcCCCceEEEccCccEEEE-eEeeec
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVQ-IRLSIT 78 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd~~I~p~~~~dgKY~vlpsGeL~Ir-~v~~~~ 78 (98)
.+..|.++.|.|.+..+-.. ...+|.+++..+.+ + ....+|.|.|. ++..+|
T Consensus 243 ~~~~g~~~~l~C~~~g~p~p--~~i~W~~~~~~~~~----~---~~~~~~~L~i~~~v~~~d 295 (331)
T 3u83_A 243 WYLQRMDVKLTCKADANPPA--TEYHWTTLNGSLPK----G---VEAQNRTLFFKGPINYSL 295 (331)
T ss_dssp CBTTCCCEEEEEEEEEESCC--CEEEEEETTBSCCT----T---EEEETTEEEECSCCCGGG
T ss_pred eEeCCCeEEEEEeCcCCCCC--CEEEEEECCCcccc----c---ceecCcEEEEeCCCcccc
Confidence 47789999999998433222 23689999865532 1 22356777777 676665
No 500
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=87.80 E-value=0.35 Score=33.62 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=36.6
Q ss_pred ceeecCeEEEEccCCCCccceeEEeEEccCC-----eeeecC--------cCCCceEEEcc----CccEEEEeEeeecC
Q psy5692 18 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-----VNIYLN--------TDTGGKYVVLS----SGDLYVQIRLSITG 79 (98)
Q Consensus 18 ~VirGNtAVLkC~IPs~V~d~V~V~SW~~Dd-----~~I~p~--------~~~dgKY~vlp----sGeL~Ir~v~~~~~ 79 (98)
.+..|.++.|.|.+... .....|.+.. ..++.. ....+||.+.. ++.|.|.+++.+|.
T Consensus 148 ~v~~G~~v~L~C~~~~~----~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 222 (256)
T 3tf7_C 148 VTVTGENVTLSCRQTNS----HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQT 222 (256)
T ss_dssp EEETTCCEEECEEECSC----CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGC
T ss_pred EEeCCCcEEEEEEcCCC----ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHC
Confidence 34589999999998643 2246788732 222110 01246777653 44799999998875
Done!