BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5694
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4VA61|DSCL1_MOUSE Down syndrome cell adhesion molecule-like protein 1 homolog OS=Mus
musculus GN=Dscaml1 PE=1 SV=2
Length = 2053
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V ++ Y + V + + GN AV +C IPS + EY+ V SW +D V+I ++ +
Sbjct: 122 VFREPYTVRVE-DQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSI----TPENRFFI 176
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITGKLKSLCT 127
S G LY+ + D +YRC T +K +GE++ S RLS+T +S+ T
Sbjct: 177 TSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSN-GARLSVTDPAESIPT 227
>sp|O60469|DSCAM_HUMAN Down syndrome cell adhesion molecule OS=Homo sapiens GN=DSCAM PE=1
SV=2
Length = 2012
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + YI V SW +D V++ +G ++++
Sbjct: 121 VLREPYTVRVE-DQKTMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLV----SGSRFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 176 TSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS 210
>sp|Q9VS29|DSCL_DROME Down syndrome cell adhesion molecule-like protein Dscam2
OS=Drosophila melanogaster GN=Dscam2 PE=2 SV=3
Length = 2074
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYV 74
VV Q Y+++V + G TA+LRC +P+++ E + V SW+ + + IY + GK+
Sbjct: 128 VVAQAYKVDVEV-LSAARGCTAILRCVVPTFVKELVRVVSWVHEPAIYIYPSLQGDGKFH 186
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
+L +G+L + N +D +S+RCR+++++T + S TRL I
Sbjct: 187 LLPTGELLIHNLQESDESQSFRCRSMHRLTRQVVVSS-PTRLRI 229
>sp|Q8VHZ8|DSCAM_RAT Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus
GN=Dscam PE=1 SV=1
Length = 2013
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + Y+ V SW +D V++ +G ++++
Sbjct: 121 VLREPYTVRVE-DQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLV----SGSRFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 176 TSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS 210
>sp|Q9ERC8|DSCAM_MOUSE Down syndrome cell adhesion molecule homolog OS=Mus musculus
GN=Dscam PE=1 SV=1
Length = 2013
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + Y+ V SW +D V++ +G ++++
Sbjct: 121 VLREPYTVRVE-DQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLV----SGSRFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 176 TSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS 210
>sp|Q8TD84|DSCL1_HUMAN Down syndrome cell adhesion molecule-like protein 1 OS=Homo sapiens
GN=DSCAML1 PE=1 SV=2
Length = 2053
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V ++ Y + V + + GN AV +C IPS + EY+ V SW +D V+I ++ +
Sbjct: 122 VFREPYTVRVE-DQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPEH----RFFI 176
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITGKLKSLCT 127
G LY+ + D +YRC T +K +GE++ S RLS+T +S+ T
Sbjct: 177 TYHGGLYISDVQKEDALSTYRCITKHKYSGETRQSN-GARLSVTDPAESIPT 227
>sp|Q9BWV1|BOC_HUMAN Brother of CDO OS=Homo sapiens GN=BOC PE=1 SV=1
Length = 1114
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 19 QKYEINVNYEHNVILGNTAVLRCQIPSYMSE----YIIVTSWIQDDVNIYLNTDTGGKYV 74
Q ++++V + V GNTAV+ C +P + Y + W++ + G Y+
Sbjct: 128 QDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLE---------ASRGNYL 178
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
++ SG+L + NA+ D Y+C N +T E + S RL +
Sbjct: 179 IMPSGNLQIVNASQED-EGMYKCAAYNPVTQEVKTSGSSDRLRV 221
>sp|Q6AZB0|BOC_MOUSE Brother of CDO OS=Mus musculus GN=Boc PE=1 SV=2
Length = 1110
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 19 QKYEINVNYEHNVILGNTAVLRCQIPSYMSE----YIIVTSWIQDDVNIYLNTDTGGKYV 74
Q ++++V + V GNTAV+ C +P + Y + W++ + Y+
Sbjct: 123 QDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRD---------NYL 173
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
++ SG+L + NA+ D Y+C N +T E + S RL +
Sbjct: 174 IMPSGNLQIVNASQED-EGMYKCAAYNPVTQEVKTSGSGDRLRV 216
>sp|Q90Z04|CDON_XENLA Cell adhesion molecule-related/down-regulated by oncogenes
OS=Xenopus laevis GN=cdon PE=2 SV=1
Length = 1249
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 21 YEINVNYEHNVILGNTAVLRCQIPSYMSE----YIIVTSWIQDDVNIYLNTDTGGKYVVL 76
+E + G++A + C+IP + Y + W+++ + KY++L
Sbjct: 122 FETTTGHSVTAEEGSSAFIGCKIPESNPKAHVRYKVRGKWLKESSD---------KYLIL 172
Query: 77 SSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
SG+L++ N + D +YRC N +T + + S +LS+
Sbjct: 173 PSGNLHILNVSVED-RGTYRCAAYNPVTHDLKLSTSTLKLSV 213
>sp|Q9UPX0|TUTLB_HUMAN Protein turtle homolog B OS=Homo sapiens GN=IGSF9B PE=2 SV=2
Length = 1349
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 31 VILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPND 90
V + A+L C+ +Y + +W D N+Y D + +L G L +F P D
Sbjct: 240 VNISQDALLTCRAEAYPGN--LTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPED 297
Query: 91 GYKSYRCRTVNKITGESQASVFQT 114
K Y C N + AS + T
Sbjct: 298 SGK-YTCVPSNSLGRSPSASAYLT 320
>sp|Q32MD9|CDON_MOUSE Cell adhesion molecule-related/down-regulated by oncogenes OS=Mus
musculus GN=Cdon PE=1 SV=2
Length = 1250
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 35 NTAVLRCQIPSYMSE----YIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPND 90
NT + C++P + Y I W++ + G Y++L SG+L V N + D
Sbjct: 134 NTGFIGCRVPESNPKAEVRYKIRGKWLKH---------STGNYIILPSGNLQVLNVSSKD 184
Query: 91 GYKSYRCRTVNKITGE 106
SY+C N +T E
Sbjct: 185 K-GSYKCAAYNPVTSE 199
>sp|O35158|CDON_RAT Cell adhesion molecule-related/down-regulated by oncogenes
OS=Rattus norvegicus GN=Cdon PE=1 SV=2
Length = 1256
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 35 NTAVLRCQIPSYMSE----YIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPND 90
NT + C++P + Y I W+ +Y + G Y++L SG+L + N + D
Sbjct: 134 NTGFIGCRVPESNPKAEVRYKIRGKWL-----MY----STGNYIILPSGNLQILNVSSKD 184
Query: 91 GYKSYRCRTVNKITGE 106
SY+C N +T E
Sbjct: 185 K-GSYKCAAYNPVTSE 199
>sp|Q3V1M1|IGS10_MOUSE Immunoglobulin superfamily member 10 OS=Mus musculus GN=Igsf10 PE=2
SV=2
Length = 2594
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 33 LGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGY 92
+G + C + + II WI D + N Y++ S+G L V+ AT N
Sbjct: 2322 VGKPVAMNCSVDGNPTPEII---WILPDGTQFANGPQNSPYLMASNGSLIVYKATRNKSG 2378
Query: 93 KSYRCRTVNKI 103
K YRC NK+
Sbjct: 2379 K-YRCTARNKV 2388
>sp|P97798|NEO1_MOUSE Neogenin OS=Mus musculus GN=Neo1 PE=1 SV=1
Length = 1493
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 30 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPN 89
+V +GN+A+L C++ + + ++ W Q+ + L+ + V L SG L + NAT
Sbjct: 173 SVYVGNSAILNCEVNADLVPFV---RWEQNRQPLLLDD----RIVKLPSGTLVISNATEG 225
Query: 90 DGYKSYRCRTVN----KITGESQASVFQ 113
DG YRC + K + E++ V Q
Sbjct: 226 DG-GLYRCIVESGGPPKFSDEAELKVLQ 252
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 32 ILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDG 91
I G T L CQ + E + SW D I N KY + +G L+V N T DG
Sbjct: 565 ITGTTIELPCQ--ADQPEDGLQISWRHDGRLIDPNVQLAEKYQISGAGSLFVKNVTIPDG 622
Query: 92 YKSYRCRTVNKITGESQASVFQT 114
+ Y C+ N+ G + AS T
Sbjct: 623 GR-YECQLKNQF-GRASASALVT 643
>sp|P20241|NRG_DROME Neuroglian OS=Drosophila melanogaster GN=Nrg PE=1 SV=2
Length = 1302
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 34 GNTAVLRCQI---PSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPND 90
G ++C++ P + +++ ++W+ TGG+Y V ++GDL + + T +D
Sbjct: 446 GRNVTIKCRVNGSPKPLVKWLRASNWL-----------TGGRYNVQANGDLEIQDVTFSD 494
Query: 91 GYKSYRCRTVNKITGESQA 109
K Y C NK GE QA
Sbjct: 495 AGK-YTCYAQNKF-GEIQA 511
>sp|A6NGN9|IGLO5_HUMAN IgLON family member 5 OS=Homo sapiens GN=IGLON5 PE=2 SV=4
Length = 336
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 33 LGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGY 92
LG A+LRC+ M+ W +DD + T G K + + +F Y
Sbjct: 230 LGRAALLRCEA---MAVPPADFQWYKDDRLLSSGTAEGLKVQTERTRSMLLFANVSARHY 286
Query: 93 KSYRCRTVNKITGESQASVFQTRLSITGKLK 123
+Y CR N++ G S AS+ RL G L+
Sbjct: 287 GNYTCRAANRL-GASSASM---RLLRPGSLE 313
>sp|Q868Z9|PPN_DROME Papilin OS=Drosophila melanogaster GN=Ppn PE=1 SV=2
Length = 2898
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 34 GNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGYK 93
G+T V+ C + Y + +WI+DDV +Y N Y L + + T D K
Sbjct: 2768 GSTIVMSCSVQGYPEPNV---TWIKDDVPLYNNERVQITY---QPHRLVLSDVTSADSGK 2821
Query: 94 SYRCRTVNKIT---GESQASV 111
Y CR N T GE+ S+
Sbjct: 2822 -YTCRASNAYTYANGEANVSI 2841
>sp|Q9P2J2|TUTLA_HUMAN Protein turtle homolog A OS=Homo sapiens GN=IGSF9 PE=1 SV=2
Length = 1179
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 39 LRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGYKSYRCR 98
L C +Y + + SW QD++N++ + + +L G L + P+D Y C
Sbjct: 246 LACHAEAYPAN--LTYSWFQDNINVFHISRLQPRVRILVDGSLRLLATQPDDA-GCYTCV 302
Query: 99 TVNKITGESQASVFQTRL 116
N + AS + T L
Sbjct: 303 PSNGLLHPPSASAYLTVL 320
>sp|Q05BQ1|TUTLA_MOUSE Protein turtle homolog A OS=Mus musculus GN=Igsf9 PE=1 SV=2
Length = 1179
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 39 LRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGYKSYRCR 98
L C+ +Y + + SW QD VN++ + + +L G L++ P+D Y C
Sbjct: 246 LACRAEAYPAN--LTYSWFQDGVNVFHISRLQSRVRILVDGSLWLQATQPDDA-GHYTCV 302
Query: 99 TVNKITGESQASVFQTRL 116
N AS + T L
Sbjct: 303 PSNGFLHPPSASAYLTVL 320
>sp|Q90610|NEO1_CHICK Neogenin (Fragment) OS=Gallus gallus PE=2 SV=1
Length = 1443
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 30 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPN 89
+V GN+A+L C++ ++ ++ W QD + L+ + L SG L + NAT
Sbjct: 128 SVYKGNSAILNCEVNVDLAPFV---RWEQDRQPLSLDD----RVFKLPSGALLIGNATDT 180
Query: 90 DGYKSYRC 97
DG YRC
Sbjct: 181 DG-GFYRC 187
>sp|P0C5H6|TUTLA_RAT Protein turtle homolog A OS=Rattus norvegicus GN=Igsf9 PE=1 SV=1
Length = 1179
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 39 LRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGYKSYRCR 98
L C+ +Y + + SW QD +N++ + + +L G L++ P+D Y C
Sbjct: 246 LACRAEAYPAN--LTYSWFQDRINVFHISRLQSRVRILVDGSLWLQATQPDDA-GHYTCV 302
Query: 99 TVNKITGESQASVFQTRL 116
N AS + T L
Sbjct: 303 PSNGFPHPPSASAYLTVL 320
>sp|Q8HW98|IGLO5_MOUSE IgLON family member 5 OS=Mus musculus GN=Iglon5 PE=2 SV=2
Length = 336
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 33 LGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGY 92
LG A+LRC+ M+ W +DD + + G K + + +F Y
Sbjct: 230 LGRAALLRCEA---MAVPPADFQWYKDDRLLSSGSAEGLKVQTERTRSMLLFANVSARHY 286
Query: 93 KSYRCRTVNKITGESQASVFQTRLSITGKLK 123
+Y CR N++ G S AS+ RL G L+
Sbjct: 287 GNYTCRAANRL-GASSASM---RLLRPGSLE 313
>sp|Q6WRI0|IGS10_HUMAN Immunoglobulin superfamily member 10 OS=Homo sapiens GN=IGSF10 PE=2
SV=1
Length = 2623
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 33 LGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGY 92
LG + L C + II WI + + N +Y++ S+G + T D
Sbjct: 2351 LGKSTALNCSVDGNPPPEII---WILPNGTRFSNGPQSYQYLIASNGSFIISKTTREDAG 2407
Query: 93 KSYRCRTVNKI 103
K YRC NK+
Sbjct: 2408 K-YRCAARNKV 2417
>sp|Q92859|NEO1_HUMAN Neogenin OS=Homo sapiens GN=NEO1 PE=1 SV=2
Length = 1461
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 30 NVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGDLYVFNATPN 89
+V GN A+L C++ + + ++ W Q+ + L+ + + L SG L + NAT
Sbjct: 162 SVYAGNNAILNCEVNADLVPFV---RWEQNRQPLLLDD----RVIKLPSGMLVISNATEG 214
Query: 90 DGYKSYRC 97
DG YRC
Sbjct: 215 DG-GLYRC 221
>sp|P37561|YABS_BACSU Uncharacterized protein YabS OS=Bacillus subtilis (strain 168)
GN=yabS PE=4 SV=1
Length = 245
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 5 DTFLLFFPMLPVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSW---IQDDV 61
DT P LP VK+ I+++ N +GN C P E +V +W +Q
Sbjct: 140 DTSASMAPKLPTVKEAL-IDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLS 198
Query: 62 NIYLNTDTGG 71
++ TGG
Sbjct: 199 TLFAKLSTGG 208
>sp|Q9GYX1|KARG_PACMR Arginine kinase OS=Pachygrapsus marmoratus PE=2 SV=1
Length = 357
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 60 DVNIYLNTDTGGKYVVLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSIT 119
DVN ++N D GK+V+ + V +GY C T + E +A VF T S+
Sbjct: 106 DVNQFVNVDPDGKFVISTR----VRCGRSMEGYPFNPCLTEAQYK-EMEAKVFSTLSSLE 160
Query: 120 GKLKS 124
G+LK
Sbjct: 161 GELKG 165
>sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2
Length = 820
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 55 SWIQDDVNIYLNTDTGGKYVVLSSGDL-YVFNATPNDGYKSYR 96
S++ I + + K +V GDL +VFN PN YK Y+
Sbjct: 647 SFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYK 689
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,539,498
Number of Sequences: 539616
Number of extensions: 1834357
Number of successful extensions: 3903
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 3879
Number of HSP's gapped (non-prelim): 40
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)