Your job contains 1 sequence.
>psy5694
MKMKDTFLLFFPMLPVVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD
VNIYLNTDTGGKYVVLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITG
KLKSLCTSY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5694
(129 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0263219 - symbol:Dscam4 "Down syndrome cell adhesi... 341 2.4e-29 1
FB|FBgn0033159 - symbol:Dscam "Down syndrome cell adhesio... 253 5.8e-20 1
FB|FBgn0261046 - symbol:Dscam3 "Down syndrome cell adhesi... 174 1.5e-11 1
UNIPROTKB|F1NY98 - symbol:DSCAM "Uncharacterized protein"... 164 1.6e-10 1
MGI|MGI:2150309 - symbol:Dscaml1 "Down syndrome cell adhe... 164 1.7e-10 1
RGD|1304887 - symbol:Dscaml1 "Down syndrome cell adhesion... 164 1.7e-10 1
UNIPROTKB|O60469 - symbol:DSCAM "Down syndrome cell adhes... 163 2.1e-10 1
MGI|MGI:1196281 - symbol:Dscam "Down syndrome cell adhesi... 162 2.7e-10 1
RGD|619992 - symbol:Dscam "Down syndrome cell adhesion mo... 162 2.7e-10 1
UNIPROTKB|Q8TD84 - symbol:DSCAML1 "Down syndrome cell adh... 156 1.2e-09 1
UNIPROTKB|E1BZF3 - symbol:E1BZF3 "Uncharacterized protein... 153 2.3e-09 1
ZFIN|ZDB-GENE-050310-7 - symbol:dscama "Down syndrome cel... 145 1.7e-08 1
ZFIN|ZDB-GENE-030131-6560 - symbol:boc "brother of CDO" s... 106 0.00011 1
UNIPROTKB|Q9BWV1 - symbol:BOC "Brother of CDO" species:96... 105 0.00016 1
RGD|1304550 - symbol:Boc "BOC cell adhesion associated, o... 101 0.00043 1
UNIPROTKB|E1BB93 - symbol:BOC "Uncharacterized protein" s... 99 0.00070 1
>FB|FBgn0263219 [details] [associations]
symbol:Dscam4 "Down syndrome cell adhesion molecule 4"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM] [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AE014296 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00690000101869
UniGene:Dm.21615 GeneID:2769008 KEGG:dme:Dmel_CG42330 CTD:2769008
FlyBase:FBgn0263219 GenomeRNAi:2769008 NextBio:849087
RefSeq:NP_001036596.2 RefSeq:NP_001137908.1 SMR:Q0E8G9
EnsemblMetazoa:FBtr0299839 EnsemblMetazoa:FBtr0299840
InParanoid:Q0E8G9 OMA:FNHRQRA Uniprot:Q0E8G9
Length = 1918
Score = 341 (125.1 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 62/105 (59%), Positives = 84/105 (80%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDD-VNIYLNTDTGGKYV 74
VV QKY + V+ E+ V+ GNTAVL+CQ+PSYMSE+++VT+W+QD +++Y NTD GGKY
Sbjct: 124 VVNQKYAVQVHDEY-VMTGNTAVLKCQVPSYMSEFVLVTAWVQDTGMHLYPNTDIGGKYT 182
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSIT 119
VLS+G+LY+ NA PND YKSY CRTVN++TGE Q S + R+ +T
Sbjct: 183 VLSNGELYINNAGPNDAYKSYTCRTVNRLTGEVQISTYPGRIIVT 227
>FB|FBgn0033159 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM;ISS] [GO:0007411 "axon guidance"
evidence=IGI;IMP;TAS] [GO:0008046 "axon guidance receptor activity"
evidence=IMP;NAS] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016319 "mushroom body development"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0006909 "phagocytosis" evidence=IMP] [GO:0051635 "bacterial
cell surface binding" evidence=IDA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0030424 "axon" evidence=IDA]
[GO:0070593 "dendrite self-avoidance" evidence=IMP;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 EMBL:AE013599
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007422
GO:GO:0006909 GO:GO:0016319 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007413 GO:GO:0051635 GO:GO:0021551 GO:GO:0048846 CTD:1826
GO:GO:0070593 GeneTree:ENSGT00690000101869 GO:GO:0008046
UniGene:Dm.2832 GeneID:35652 KEGG:dme:Dmel_CG17800
FlyBase:FBgn0033159 GenomeRNAi:35652 NextBio:794432
InterPro:IPR021012 Pfam:PF12355 RefSeq:NP_001036503.1
ProteinModelPortal:Q0E9K8 SMR:Q0E9K8 STRING:Q0E9K8 PRIDE:Q0E9K8
EnsemblMetazoa:FBtr0111102 UCSC:CG17800-RAN Bgee:Q0E9K8
Uniprot:Q0E9K8
Length = 2037
Score = 253 (94.1 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 51/111 (45%), Positives = 76/111 (68%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDT-GGKYV 74
VV Q YE + E+ VI GN AVL+C IPS++++++ V SWI D+ N+ +D GKY+
Sbjct: 136 VVNQFYEAEIMTEY-VIRGNAAVLKCSIPSFVADFVRVESWIDDEGNVLSFSDNYDGKYL 194
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITGKLKSL 125
VL SG+L++ P DGYKSY+CRT +++TGE++ S + RL IT + S+
Sbjct: 195 VLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSV 245
>FB|FBgn0261046 [details] [associations]
symbol:Dscam3 "Down syndrome cell adhesion molecule 3"
species:7227 "Drosophila melanogaster" [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007156 "homophilic cell adhesion" evidence=IC] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005887 "integral to
plasma membrane" evidence=ISM] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 UniGene:Dm.16769
GeneID:42103 KEGG:dme:Dmel_CG31190 CTD:42103 FlyBase:FBgn0261046
ChiTaRS:Dscam3 GenomeRNAi:42103 NextBio:827185 RefSeq:NP_996226.1
ProteinModelPortal:Q7KSE9 SMR:Q7KSE9 PRIDE:Q7KSE9 UCSC:CG31190-RB
InParanoid:Q7KSE9 OMA:NATAYPL ArrayExpress:Q7KSE9 Bgee:Q7KSE9
Uniprot:Q7KSE9
Length = 2046
Score = 174 (66.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQ-DDVNIYLNTDTGGKYV 74
VV++++ ++V V LGN+A+++C IP Y+ Y+ V SW + +++ + +D G+YV
Sbjct: 135 VVRRQFHVHVE-NTEVYLGNSALIKCAIPEYVRPYVRVASWHRGEEILLPDLSDVAGRYV 193
Query: 75 VLS-SGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
VL+ SGDLYV + DG + C N + GE Q S
Sbjct: 194 VLAASGDLYVRSVRSEDGLMKFSCLVTNTLNGERQRS 230
>UNIPROTKB|F1NY98 [details] [associations]
symbol:DSCAM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0042327
"positive regulation of phosphorylation" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IEA] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=IEA] [GO:0060060 "post-embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0070593 "dendrite
self-avoidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0030426 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042327 OMA:ECKNKSE GeneTree:ENSGT00690000101869
EMBL:AADN02010831 EMBL:AADN02010832 EMBL:AADN02010833
EMBL:AADN02010834 EMBL:AADN02010835 EMBL:AADN02010836
EMBL:AADN02010837 IPI:IPI00598254 Ensembl:ENSGALT00000025993
Uniprot:F1NY98
Length = 1994
Score = 164 (62.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/95 (34%), Positives = 57/95 (60%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + YI V SW +D V++ +G ++++
Sbjct: 107 VLREPYTVRVE-DQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLV----SGPRFLI 161
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 162 TSTGALYILDVQNEDGLYNYRCITRHRYTGETRQS 196
>MGI|MGI:2150309 [details] [associations]
symbol:Dscaml1 "Down syndrome cell adhesion molecule like 1"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=ISO;ISA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IMP] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007420 "brain development"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016338 "calcium-independent cell-cell adhesion"
evidence=ISA] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0070593 "dendrite self-avoidance" evidence=IMP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:2150309 GO:GO:0016021
GO:GO:0005886 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0007156
GO:GO:0016338 EMBL:AC126804 HOVERGEN:HBG051409 GO:GO:0070593
HOGENOM:HOG000112277 OrthoDB:EOG40GCPX EMBL:AC119237 EMBL:AC159893
EMBL:AC174644 EMBL:BC096527 IPI:IPI00762484 UniGene:Mm.325499
ProteinModelPortal:Q4VA61 SMR:Q4VA61 STRING:Q4VA61 PaxDb:Q4VA61
PRIDE:Q4VA61 UCSC:uc009pfz.1 InParanoid:Q4VA61 Bgee:Q4VA61
Genevestigator:Q4VA61 Uniprot:Q4VA61
Length = 2053
Score = 164 (62.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/112 (33%), Positives = 62/112 (55%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V ++ Y + V + ++ GN AV +C IPS + EY+ V SW +D V+I ++ +
Sbjct: 122 VFREPYTVRVEDQRSM-RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSI----TPENRFFI 176
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITGKLKSLCT 127
S G LY+ + D +YRC T +K +GE++ S RLS+T +S+ T
Sbjct: 177 TSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSN-GARLSVTDPAESIPT 227
>RGD|1304887 [details] [associations]
symbol:Dscaml1 "Down syndrome cell adhesion molecule-like 1"
species:10116 "Rattus norvegicus" [GO:0007156 "homophilic cell
adhesion" evidence=IEA;ISO] [GO:0007162 "negative regulation of
cell adhesion" evidence=IEA;ISO] [GO:0007420 "brain development"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0070593 "dendrite self-avoidance"
evidence=IEA;ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1304887 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0048704 GO:GO:0007156 EMBL:CH473975
GO:GO:0070593 GeneTree:ENSGT00690000101869 CTD:57453 KO:K06768
OrthoDB:EOG40GCPX IPI:IPI00369575 RefSeq:NP_001101611.1
UniGene:Rn.100124 Ensembl:ENSRNOT00000022476 GeneID:315615
KEGG:rno:315615 UCSC:RGD:1304887 NextBio:669526 Uniprot:D3ZPL7
Length = 2111
Score = 164 (62.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/112 (33%), Positives = 62/112 (55%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V ++ Y + V + ++ GN AV +C IPS + EY+ V SW +D V+I ++ +
Sbjct: 180 VFREPYTVRVEDQRSM-RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSI----TPENRFFI 234
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITGKLKSLCT 127
S G LY+ + D +YRC T +K +GE++ S RLS+T +S+ T
Sbjct: 235 TSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSN-GARLSVTDPAESIPT 285
>UNIPROTKB|O60469 [details] [associations]
symbol:DSCAM "Down syndrome cell adhesion molecule"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IEA] [GO:0060060
"post-embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042327 "positive
regulation of phosphorylation" evidence=IDA] [GO:0007162 "negative
regulation of cell adhesion" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS;TAS] [GO:0030426 "growth cone" evidence=ISS]
[GO:0048842 "positive regulation of axon extension involved in axon
guidance" evidence=IDA] [GO:0070593 "dendrite self-avoidance"
evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0005576
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 Pathway_Interaction_DB:hnf3apathway
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
Reactome:REACT_111155 GO:GO:0007162 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327 GO:GO:0060060
EMBL:AF023450 EMBL:AF023449 EMBL:AF217525 EMBL:AL163283
EMBL:AL163282 EMBL:AL163281 IPI:IPI00029700 IPI:IPI00219339
RefSeq:NP_001258463.1 RefSeq:NP_001380.2 UniGene:Hs.397800
ProteinModelPortal:O60469 SMR:O60469 STRING:O60469
PhosphoSite:O60469 PaxDb:O60469 PRIDE:O60469
Ensembl:ENST00000400454 GeneID:1826 KEGG:hsa:1826 UCSC:uc002yyq.1
CTD:1826 GeneCards:GC21M041382 HGNC:HGNC:3039 MIM:602523
neXtProt:NX_O60469 PharmGKB:PA27491 HOVERGEN:HBG051409
InParanoid:O60469 KO:K06767 OMA:ECKNKSE OrthoDB:EOG4J9MXZ
ChiTaRS:DSCAM GenomeRNAi:1826 NextBio:7449 ArrayExpress:O60469
Bgee:O60469 CleanEx:HS_DSCAM Genevestigator:O60469
GermOnline:ENSG00000171587 GO:GO:0070593 GO:GO:0048842
Uniprot:O60469
Length = 2012
Score = 163 (62.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 33/95 (34%), Positives = 57/95 (60%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + YI V SW +D V++ +G ++++
Sbjct: 121 VLREPYTVRVE-DQKTMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLV----SGSRFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 176 TSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS 210
>MGI|MGI:1196281 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IMP] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0042327
"positive regulation of phosphorylation" evidence=ISO] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=ISO;IDA] [GO:0060060 "post-embryonic retina morphogenesis
in camera-type eye" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1196281 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007626 GO:GO:0030426 GO:GO:0048813 GO:GO:0007162
eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327
EMBL:CH466602 GO:GO:0060060 Reactome:REACT_137402 CTD:1826
HOVERGEN:HBG051409 KO:K06767 OMA:ECKNKSE ChiTaRS:DSCAM
GO:GO:0070593 GO:GO:0048842 EMBL:AY005483 EMBL:AF315558
IPI:IPI00112204 RefSeq:NP_112451.1 UniGene:Mm.328737 HSSP:O88792
ProteinModelPortal:Q9ERC8 SMR:Q9ERC8 IntAct:Q9ERC8 STRING:Q9ERC8
PhosphoSite:Q9ERC8 PRIDE:Q9ERC8 Ensembl:ENSMUST00000056102
GeneID:13508 KEGG:mmu:13508 UCSC:uc008add.1
GeneTree:ENSGT00690000101869 HOGENOM:HOG000112277 InParanoid:Q9ERC8
NextBio:284054 Bgee:Q9ERC8 Genevestigator:Q9ERC8 Uniprot:Q9ERC8
Length = 2013
Score = 162 (62.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 32/95 (33%), Positives = 57/95 (60%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + Y+ V SW +D V++ +G ++++
Sbjct: 121 VLREPYTVRVE-DQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLV----SGSRFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 176 TSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS 210
>RGD|619992 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=ISO;ISS]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=ISO;ISS] [GO:0007626
"locomotory behavior" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030424 "axon" evidence=ISO;ISS]
[GO:0030426 "growth cone" evidence=ISO;ISS] [GO:0042327 "positive
regulation of phosphorylation" evidence=ISO;ISS] [GO:0048813
"dendrite morphogenesis" evidence=ISO] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=ISO;IMP] [GO:0060060 "post-embryonic retina morphogenesis
in camera-type eye" evidence=ISO] [GO:0070593 "dendrite
self-avoidance" evidence=ISO;ISS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:619992 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
GO:GO:0007162 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
GO:GO:0042327 GO:GO:0060060 CTD:1826 HOVERGEN:HBG051409 KO:K06767
OrthoDB:EOG4J9MXZ GO:GO:0070593 GO:GO:0048842 HSSP:O88792
HOGENOM:HOG000112277 EMBL:AF334385 IPI:IPI00207531
RefSeq:NP_598271.1 UniGene:Rn.24399 ProteinModelPortal:Q8VHZ8
SMR:Q8VHZ8 IntAct:Q8VHZ8 STRING:Q8VHZ8 GeneID:171119
KEGG:rno:171119 InParanoid:Q8VHZ8 NextBio:621852
ArrayExpress:Q8VHZ8 Genevestigator:Q8VHZ8 Uniprot:Q8VHZ8
Length = 2013
Score = 162 (62.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 32/95 (33%), Positives = 57/95 (60%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + GN AV +C IPS + Y+ V SW +D V++ +G ++++
Sbjct: 121 VLREPYTVRVE-DQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLV----SGSRFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + DG +YRC T ++ TGE++ S
Sbjct: 176 TSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS 210
>UNIPROTKB|Q8TD84 [details] [associations]
symbol:DSCAML1 "Down syndrome cell adhesion molecule-like
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007162 "negative regulation of cell
adhesion" evidence=IEA] [GO:0070593 "dendrite self-avoidance"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=NAS] [GO:0009986
"cell surface" evidence=IDA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=NAS] [GO:0007420 "brain development"
evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IDA] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0001709 "cell fate determination" evidence=NAS] [GO:0005886
"plasma membrane" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AF334384 GO:GO:0016021 GO:GO:0005886
GO:GO:0042803 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 Reactome:REACT_111155
GO:GO:0007409 GO:GO:0007162 eggNOG:NOG12793 GO:GO:0009953
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0007156
GO:GO:0001709 HOVERGEN:HBG051409 GO:GO:0070593 HOGENOM:HOG000112277
EMBL:AF491813 EMBL:AF304304 EMBL:AF304305 EMBL:AB032958
EMBL:AP000711 EMBL:AP000757 EMBL:AP001554 EMBL:AP002342
IPI:IPI00154755 IPI:IPI00978116 RefSeq:NP_065744.2
UniGene:Hs.659513 PDB:1VA9 PDBsum:1VA9 ProteinModelPortal:Q8TD84
SMR:Q8TD84 IntAct:Q8TD84 STRING:Q8TD84 DMDM:73620825 PaxDb:Q8TD84
PRIDE:Q8TD84 Ensembl:ENST00000321322 GeneID:57453 KEGG:hsa:57453
UCSC:uc001prh.1 CTD:57453 GeneCards:GC11M117332 HGNC:HGNC:14656
HPA:CAB025540 MIM:611782 neXtProt:NX_Q8TD84 PharmGKB:PA38384
InParanoid:Q8TD84 KO:K06768 OrthoDB:EOG40GCPX ChiTaRS:DSCAML1
EvolutionaryTrace:Q8TD84 GenomeRNAi:57453 NextBio:63628
ArrayExpress:Q8TD84 Bgee:Q8TD84 CleanEx:HS_DSCAML1
Genevestigator:Q8TD84 GermOnline:ENSG00000177103 Uniprot:Q8TD84
Length = 2053
Score = 156 (60.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/112 (33%), Positives = 61/112 (54%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V ++ Y + V + ++ GN AV +C IPS + EY+ V SW +D V+I ++ +
Sbjct: 122 VFREPYTVRVEDQRSM-RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPEH----RFFI 176
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSITGKLKSLCT 127
G LY+ + D +YRC T +K +GE++ S RLS+T +S+ T
Sbjct: 177 TYHGGLYISDVQKEDALSTYRCITKHKYSGETRQSN-GARLSVTDPAESIPT 227
>UNIPROTKB|E1BZF3 [details] [associations]
symbol:E1BZF3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0070593 "dendrite
self-avoidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007162 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GeneTree:ENSGT00690000101869 OMA:IVICILR EMBL:AADN02058061
EMBL:AADN02058062 EMBL:AADN02058063 EMBL:AADN02058064
EMBL:AADN02058065 EMBL:AADN02058066 EMBL:AADN02058067
IPI:IPI00573997 ProteinModelPortal:E1BZF3
Ensembl:ENSGALT00000025989 Uniprot:E1BZF3
Length = 1870
Score = 153 (58.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V ++ Y + V + ++ GN AV +C IPS + EY+ V SW +D V+I ++ +
Sbjct: 124 VFREPYTVRVEDQRSM-RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPEN----RFFI 178
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSIT 119
S G LY+ + D +YRC T +K +GE++ S RLS++
Sbjct: 179 TSYGGLYISDVQKEDALSTYRCITKHKYSGETRQSN-GARLSVS 221
>ZFIN|ZDB-GENE-050310-7 [details] [associations]
symbol:dscama "Down syndrome cell adhesion molecule
a" species:7955 "Danio rerio" [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-050310-7 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042074 HOVERGEN:HBG051409 KO:K06767
OrthoDB:EOG4J9MXZ GeneTree:ENSGT00690000101869 HOGENOM:HOG000112277
EMBL:BX248386 EMBL:CABZ01051870 EMBL:CABZ01051871 EMBL:CABZ01051872
EMBL:CABZ01051873 EMBL:CABZ01051874 EMBL:CR848005 EMBL:AY552547
IPI:IPI00501717 RefSeq:NP_001025395.1 UniGene:Dr.84606 SMR:Q53CM6
Ensembl:ENSDART00000125045 GeneID:568643 KEGG:dre:568643 CTD:568643
NextBio:20889266 Uniprot:Q53CM6
Length = 2024
Score = 145 (56.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/95 (31%), Positives = 54/95 (56%)
Query: 16 VVKQKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVV 75
V+++ Y + V + + G+ AV +C IPS + YI V SW +D V + +G ++++
Sbjct: 121 VLREPYTVRVA-DQTAMRGSVAVFKCIIPSSVENYITVVSWERDTVPLV----SGARFLI 175
Query: 76 LSSGDLYVFNATPNDGYKSYRCRTVNKITGESQAS 110
S+G LY+ + D +YRC T ++ T E++ S
Sbjct: 176 TSTGALYILDVQKEDELFNYRCMTRHRYTSETRQS 210
>ZFIN|ZDB-GENE-030131-6560 [details] [associations]
symbol:boc "brother of CDO" species:7955 "Danio
rerio" [GO:0008589 "regulation of smoothened signaling pathway"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0042802 "identical
protein binding" evidence=IDA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-030131-6560 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0042802 InterPro:IPR013098
Pfam:PF07679 GO:GO:0031290 CTD:91653 HOVERGEN:HBG061102
OrthoDB:EOG44TP75 GO:GO:0008589 HOGENOM:HOG000060072 HSSP:Q10466
EMBL:AF461120 IPI:IPI00493514 RefSeq:NP_001005393.1
UniGene:Dr.151204 UniGene:Dr.75953 ProteinModelPortal:Q8UVD6
SMR:Q8UVD6 IntAct:Q8UVD6 PRIDE:Q8UVD6 GeneID:334628 KEGG:dre:334628
NextBio:20810486 ArrayExpress:Q8UVD6 Bgee:Q8UVD6 Uniprot:Q8UVD6
Length = 1032
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 21 YEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSSGD 80
+E + E V GNTAV+ C +P + + S Q+ +L T G Y+++ SG+
Sbjct: 135 FEPDDQQEIEVDEGNTAVIECHLPESQPKAQVRYSVKQE----WLETSKGN-YLIMPSGN 189
Query: 81 LYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
L + NAT +D Y C N +T E + S RL I
Sbjct: 190 LQIANATRDDE-GPYICAAYNPVTQEIKTSTSTDRLRI 226
>UNIPROTKB|Q9BWV1 [details] [associations]
symbol:BOC "Brother of CDO" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0044295 "axonal growth cone"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045663 "positive regulation of myoblast differentiation"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0042692 "muscle cell differentiation" evidence=TAS] [GO:0051149
"positive regulation of muscle cell differentiation" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AY027658 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 GO:GO:0043025 EMBL:CH471052
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 GO:GO:0030426 GO:GO:0042692
Pathway_Interaction_DB:hedgehog_2pathway InterPro:IPR013098
Pfam:PF07679 GO:GO:0007224 EMBL:AY358328 EMBL:AK074556
EMBL:AK090455 EMBL:AC026329 EMBL:BC136390 IPI:IPI00465322
IPI:IPI00744645 IPI:IPI00747930 RefSeq:NP_150279.1
UniGene:Hs.591318 PDB:3N1G PDB:3N1M PDB:3N1P PDBsum:3N1G
PDBsum:3N1M PDBsum:3N1P ProteinModelPortal:Q9BWV1 SMR:Q9BWV1
IntAct:Q9BWV1 STRING:Q9BWV1 PhosphoSite:Q9BWV1 DMDM:74761309
PaxDb:Q9BWV1 PRIDE:Q9BWV1 Ensembl:ENST00000273395
Ensembl:ENST00000355385 Ensembl:ENST00000495514 GeneID:91653
KEGG:hsa:91653 UCSC:uc003dzx.3 UCSC:uc003dzz.3 CTD:91653
GeneCards:GC03P112929 HGNC:HGNC:17173 HPA:CAB025806 MIM:608708
neXtProt:NX_Q9BWV1 PharmGKB:PA143485316 eggNOG:NOG150637
HOVERGEN:HBG061102 OMA:QPDHGRL OrthoDB:EOG44TP75 PhylomeDB:Q9BWV1
EvolutionaryTrace:Q9BWV1 GenomeRNAi:91653 NextBio:77360
ArrayExpress:Q9BWV1 Bgee:Q9BWV1 CleanEx:HS_BOC
Genevestigator:Q9BWV1 GermOnline:ENSG00000144857 GO:GO:0045663
Uniprot:Q9BWV1
Length = 1114
Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 19 QKYEINVNYEHNVILGNTAVLRCQIPSYMSEYIIVTSWIQDDVNIYLNTDTGGKYVVLSS 78
Q ++++V + V GNTAV+ C +P + + S Q+ +L G Y+++ S
Sbjct: 128 QDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQE----WLEASRGN-YLIMPS 182
Query: 79 GDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
G+L + NA+ D Y+C N +T E + S RL +
Sbjct: 183 GNLQIVNASQEDE-GMYKCAAYNPVTQEVKTSGSSDRLRV 221
>RGD|1304550 [details] [associations]
symbol:Boc "BOC cell adhesion associated, oncogene regulated"
species:10116 "Rattus norvegicus" [GO:0007224 "smoothened signaling
pathway" evidence=IEA;ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0030030 "cell projection organization"
evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IEA;ISO] [GO:0044295 "axonal growth cone" evidence=IDA]
[GO:0045663 "positive regulation of myoblast differentiation"
evidence=IEA;ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1304550 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043025 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GO:GO:0044295 GO:GO:0007224 CTD:91653 OMA:QPDHGRL OrthoDB:EOG44TP75
GO:GO:0045663 GeneTree:ENSGT00680000099752 EMBL:CH473967
IPI:IPI00373075 RefSeq:XP_003752539.1 UniGene:Rn.51907
Ensembl:ENSRNOT00000002790 GeneID:360715 KEGG:rno:360715
UCSC:RGD:1304550 Uniprot:D4A0Z7
Length = 1109
Score = 101 (40.6 bits), Expect = 0.00043, P = 0.00043
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 19 QKYEINVNYEHNVILGNTAVLRCQIP-SYMS---EYIIVTSWIQDDVNIYLNTDTGGKYV 74
Q ++++V + V GNTAV+ C +P S+ Y + W++ + D Y+
Sbjct: 123 QDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLE------ASRDN---YL 173
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
++ SG+L + NA+ D +Y+C N +T E + S RL +
Sbjct: 174 IMPSGNLQIVNASQEDE-GTYKCAAYNPVTQEVKTSGSSDRLRV 216
>UNIPROTKB|E1BB93 [details] [associations]
symbol:BOC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 GO:GO:0043025 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030426 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007224
CTD:91653 OMA:QPDHGRL GO:GO:0045663 GeneTree:ENSGT00680000099752
EMBL:DAAA02001392 IPI:IPI00716525 RefSeq:NP_001193148.1
UniGene:Bt.690 ProteinModelPortal:E1BB93 PRIDE:E1BB93
Ensembl:ENSBTAT00000018474 GeneID:512018 KEGG:bta:512018
NextBio:20870210 Uniprot:E1BB93
Length = 1115
Score = 99 (39.9 bits), Expect = 0.00070, P = 0.00070
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 19 QKYEINVNYEHNVILGNTAVLRCQIP-SYMS---EYIIVTSWIQDDVNIYLNTDTGGKYV 74
Q ++++V + V GNTAV+ C +P S+ Y + W++ + D Y+
Sbjct: 128 QDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLE------ASRDN---YL 178
Query: 75 VLSSGDLYVFNATPNDGYKSYRCRTVNKITGESQASVFQTRLSI 118
++ SG+L + NA+ D Y+C N +T E + S RL +
Sbjct: 179 IMPSGNLQIVNASQEDE-GMYKCAAYNPVTQEVKTSGSSDRLRV 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 129 129 0.00091 102 3 11 22 0.38 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 591 (63 KB)
Total size of DFA: 136 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.96u 0.07s 13.03t Elapsed: 00:00:03
Total cpu time: 12.96u 0.08s 13.04t Elapsed: 00:00:03
Start: Thu Aug 15 15:18:20 2013 End: Thu Aug 15 15:18:23 2013