Query psy5697
Match_columns 145
No_of_seqs 137 out of 1168
Neff 7.4
Searched_HMMs 29240
Date Sat Aug 17 00:20:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.8 1.7E-18 5.8E-23 118.0 8.9 89 44-139 11-105 (107)
2 3knb_A Titin; IG-like, titin, 99.7 9.1E-18 3.1E-22 112.8 7.3 88 45-139 4-99 (100)
3 2edj_A Roundabout homolog 2; K 99.7 1.2E-16 4.1E-21 105.6 10.7 89 43-138 5-97 (100)
4 3qp3_A Titin; I-SET IG-like, s 99.7 2.7E-16 9.3E-21 104.2 10.5 91 42-139 4-100 (103)
5 2cqv_A MLCK, myosin light chai 99.7 4.3E-16 1.5E-20 105.5 11.1 92 44-142 5-102 (114)
6 1wit_A Twitchin 18TH IGSF modu 99.7 8.4E-17 2.9E-21 105.3 6.8 78 46-130 2-84 (93)
7 1g1c_A Immunoglobulin-like dom 99.7 3.7E-16 1.3E-20 102.7 9.7 88 44-138 3-97 (99)
8 1u2h_A APEG-1, aortic preferen 99.7 3.2E-16 1.1E-20 103.1 9.3 88 44-138 3-97 (99)
9 2kkq_A Myotilin; unknown funct 99.7 2.9E-16 9.8E-21 107.5 9.2 96 42-144 11-114 (116)
10 1he7_A High affinity nerve gro 99.7 2.3E-16 7.8E-21 111.5 8.2 72 60-138 17-98 (126)
11 2kdg_A Myotilin; immonoglobuli 99.7 3.7E-16 1.3E-20 102.9 8.2 86 46-138 5-97 (100)
12 3puc_A Titin; I-SET IG-like do 99.7 9.2E-16 3.1E-20 100.6 10.1 88 44-138 4-97 (99)
13 2eo9_A Roundabout homolog 1; b 99.6 2.7E-16 9.3E-21 107.1 6.9 90 43-139 5-98 (118)
14 4fa8_A Secreted protein BARF1; 99.6 2.9E-16 9.8E-21 117.7 7.0 108 10-131 78-193 (203)
15 2v9t_A Roundabout homolog 1; s 99.6 1.1E-15 3.6E-20 103.8 9.2 93 44-138 7-106 (117)
16 2dm2_A Palladin; beta-sandwich 99.6 7.3E-16 2.5E-20 103.6 8.0 95 43-144 5-107 (110)
17 1wwb_X Protein (brain derived 99.6 9.3E-16 3.2E-20 103.0 8.3 71 61-138 19-97 (103)
18 2yr3_A Myosin light chain kina 99.6 5.1E-16 1.7E-20 102.4 6.8 82 41-130 6-90 (99)
19 3kvq_A Vascular endothelial gr 99.6 4.3E-16 1.5E-20 103.9 6.3 92 44-142 8-103 (108)
20 3zyj_A Leucine-rich repeat-con 99.6 9.4E-16 3.2E-20 125.8 9.5 132 2-143 284-437 (440)
21 3kld_A Contactin 4, axcam, BIG 99.6 1.1E-15 3.9E-20 122.5 9.7 113 10-139 267-383 (384)
22 2dm3_A KIAA0992 protein, palla 99.6 8.6E-16 3E-20 102.9 7.0 95 43-144 6-107 (110)
23 3irg_B Obscurin-like protein 1 99.6 2.7E-15 9.2E-20 99.8 8.9 88 43-138 10-104 (107)
24 1wwc_A Protein (NT-3 growth fa 99.6 1.4E-15 4.8E-20 103.7 7.6 81 44-131 6-92 (118)
25 3cx2_A Myosin-binding protein 99.6 2.4E-15 8.1E-20 101.3 8.1 86 46-138 4-107 (108)
26 3bfo_A Mucosa-associated lymph 99.6 7.5E-15 2.6E-19 95.7 10.0 81 46-140 3-86 (91)
27 3dmk_A DOWN syndrome cell adhe 99.6 1.3E-15 4.3E-20 132.4 8.0 97 43-139 35-135 (816)
28 3caf_A Fibroblast growth facto 99.6 2.7E-15 9.3E-20 98.8 7.7 80 44-130 2-91 (100)
29 1fhg_A Telokin; immunoglobulin 99.6 6.9E-15 2.3E-19 105.0 10.3 94 42-142 37-137 (154)
30 2yd1_A Tyrosine-protein phosph 99.6 1.7E-14 5.8E-19 106.2 12.3 120 11-139 75-200 (212)
31 2bk8_A Connectin, M1, titin he 99.6 1.9E-14 6.5E-19 94.5 10.9 70 61-137 19-92 (97)
32 2ckn_A Basic fibroblast growth 99.6 3.8E-15 1.3E-19 98.0 7.3 77 44-130 7-86 (95)
33 3irg_A Titin; IG-like, titin, 99.6 3.1E-15 1E-19 97.9 6.9 87 45-138 4-98 (100)
34 1nct_A Titin; cell adhesion, g 99.6 3E-15 1E-19 100.9 6.8 90 41-137 9-104 (106)
35 2v5m_A Dscam; neurobiology SPL 99.6 2E-15 6.8E-20 119.7 5.9 94 45-138 2-99 (388)
36 2e7c_A Myosin-binding protein 99.6 3E-14 1E-18 97.0 10.0 70 61-138 42-114 (118)
37 2r15_A Myomesin-1; sarcomeric 99.6 3.3E-14 1.1E-18 103.7 10.8 86 46-138 116-209 (212)
38 2yd6_A PTPRD protein; hydrolas 99.6 4E-14 1.4E-18 104.3 11.2 120 10-137 73-200 (212)
39 1waa_A Titin; metal binding pr 99.5 3.1E-14 1.1E-18 94.4 9.2 83 44-138 3-91 (93)
40 2wv3_A Neuroplastin; igcam, me 99.5 1.2E-13 4.3E-18 99.7 13.2 114 10-138 65-189 (190)
41 3zyi_A Leucine-rich repeat-con 99.5 3.2E-15 1.1E-19 123.0 5.0 128 2-140 295-444 (452)
42 3s97_C Contactin-1; carbonic a 99.5 7.2E-14 2.5E-18 100.7 11.5 120 10-138 75-200 (201)
43 2v44_A NCAM2, neural cell adhe 99.5 5.9E-14 2E-18 101.0 10.9 115 10-138 67-186 (189)
44 3qr2_A Basigin; CD147, EMMPRIN 99.5 1.7E-14 5.8E-19 100.7 7.8 84 40-130 15-116 (137)
45 3kld_A Contactin 4, axcam, BIG 99.5 6.1E-15 2.1E-19 118.2 6.3 86 45-137 4-96 (384)
46 2yuz_A Myosin-binding protein 99.5 1.9E-14 6.6E-19 96.4 7.6 89 43-142 4-98 (100)
47 1epf_A NCAM, protein (neural c 99.5 6.4E-14 2.2E-18 100.8 10.9 115 10-138 71-190 (191)
48 2iep_A Muscle-specific kinase 99.5 2.4E-14 8.3E-19 102.9 8.3 114 10-138 71-187 (192)
49 3rbs_A Myomesin-1; immunoglobu 99.5 6.5E-15 2.2E-19 110.1 5.5 83 45-136 116-204 (207)
50 3r4d_A CEA-related cell adhesi 99.5 1.1E-13 3.6E-18 100.9 11.8 116 10-138 80-197 (208)
51 1gxe_A Myosin binding protein 99.5 1.4E-14 4.9E-19 103.2 6.8 70 61-138 36-136 (139)
52 2dav_A SLOW MYBP-C, myosin-bin 99.5 2E-14 6.9E-19 101.4 7.2 91 47-144 8-117 (126)
53 2a38_A Titin; Z1Z2, structural 99.5 1.1E-13 3.8E-18 99.6 11.3 109 10-130 72-185 (194)
54 2id5_A Lingo-1, leucine rich r 99.5 6E-15 2.1E-19 121.5 4.6 126 2-137 325-475 (477)
55 2c5d_C AXL oncogene, tyrosine- 99.5 8.9E-14 3E-18 100.7 10.1 111 10-139 77-191 (195)
56 2y25_A Myomesin; structural pr 99.5 1.3E-13 4.3E-18 106.1 11.5 90 44-140 219-316 (317)
57 3b43_A Titin; I-SET IG fold, e 99.5 6.4E-14 2.2E-18 118.0 10.5 116 10-140 356-477 (570)
58 3p3y_A Neurofascin; IG domains 99.5 7.5E-14 2.6E-18 110.8 10.2 114 10-138 284-402 (404)
59 1cs6_A Axonin-1; neural cell a 99.5 6.9E-14 2.4E-18 110.8 9.9 112 10-138 266-381 (382)
60 2rik_A Titin; I-SET IG fold, p 99.5 1E-13 3.5E-18 105.5 10.4 113 10-137 164-282 (284)
61 2edn_A Myosin-binding protein 99.5 1.3E-14 4.4E-19 101.3 4.6 92 41-139 7-116 (118)
62 2edf_A Obscurin; beta-sandwich 99.5 7.6E-14 2.6E-18 92.5 8.1 90 42-143 4-99 (103)
63 2v5t_A NCAM2, N-CAM 2, neural 99.5 1.2E-13 4.2E-18 98.8 9.6 72 60-138 115-187 (189)
64 3b43_A Titin; I-SET IG fold, e 99.5 1.2E-13 4.1E-18 116.4 10.8 113 10-137 449-568 (570)
65 1gl4_B Basement membrane-speci 99.5 1.5E-13 5.2E-18 90.3 9.0 68 60-137 27-96 (98)
66 2lvc_A Obscurin-like protein 1 99.5 1.6E-14 5.5E-19 95.7 4.2 61 60-128 23-85 (91)
67 4fqp_A Poliovirus receptor; im 99.5 4.9E-13 1.7E-17 103.7 12.7 86 42-138 212-303 (313)
68 1bih_A Hemolin; insect immunit 99.5 2.4E-13 8.1E-18 107.8 10.8 111 10-137 279-394 (395)
69 2e6p_A Obscurin-like protein 1 99.5 1.3E-13 4.4E-18 91.6 7.6 87 44-141 5-99 (104)
70 3laf_A Deleted in colorectal c 99.5 1E-13 3.6E-18 110.1 8.4 113 10-138 284-400 (403)
71 3grw_A Fibroblast growth facto 99.5 3E-13 1E-17 100.6 10.4 121 10-140 81-219 (241)
72 3k0w_A Mucosa-associated lymph 99.5 7.8E-13 2.7E-17 98.1 12.6 116 10-139 74-200 (218)
73 1rhf_A Tyrosine-protein kinase 99.5 3.4E-13 1.1E-17 96.5 10.2 107 10-138 69-180 (182)
74 2ens_A Advanced glycosylation 99.5 4.2E-14 1.4E-18 93.0 4.9 83 44-140 8-94 (96)
75 2fbo_J V1V2;, variable region- 99.5 5.6E-13 1.9E-17 99.4 11.7 119 5-131 93-240 (250)
76 3so5_A LIG-3, leucine-rich rep 99.5 3.5E-13 1.2E-17 89.0 9.2 88 44-138 8-110 (112)
77 2dlt_A Myosin binding protein 99.5 1.5E-13 5.1E-18 91.8 7.4 87 42-138 4-96 (106)
78 2j8h_A Titin, connectin; cardi 99.5 1.6E-13 5.4E-18 99.2 7.6 70 61-138 122-194 (197)
79 1itb_B Type 1 interleukin-1 re 99.5 4.6E-13 1.6E-17 103.4 10.7 114 10-131 171-305 (315)
80 2cr3_A Basic fibroblast growth 99.4 3.6E-13 1.2E-17 89.1 8.5 71 61-142 21-91 (99)
81 3mjg_X Beta-type platelet-deri 99.4 1.2E-12 4.2E-17 99.8 12.7 121 10-143 150-282 (289)
82 2cry_A KIN of IRRE-like protei 99.4 1.7E-14 5.7E-19 98.8 1.9 83 41-131 9-104 (122)
83 2j8h_A Titin, connectin; cardi 99.4 8.8E-13 3E-17 95.2 10.9 89 44-139 2-98 (197)
84 2v9r_A Roundabout homolog 1; p 99.4 1E-12 3.5E-17 95.5 11.3 75 60-142 128-205 (212)
85 3b5h_A Cervical EMMPRIN, HAB18 99.4 1.6E-12 5.5E-17 93.2 12.0 111 10-138 58-180 (184)
86 3ojm_B Fibroblast growth facto 99.4 5.1E-13 1.8E-17 98.1 9.2 124 10-143 85-225 (231)
87 2wim_A N-CAM 2, NCAM2, neural 99.4 1.6E-12 5.3E-17 99.0 12.2 71 61-138 212-283 (291)
88 2yd6_A PTPRD protein; hydrolas 99.4 7.4E-13 2.5E-17 97.5 9.9 89 44-139 4-100 (212)
89 3mtr_A N-CAM-1, NCAM-1, neural 99.4 5.8E-13 2E-17 98.3 9.2 91 43-141 16-114 (215)
90 2v5m_A Dscam; neurobiology SPL 99.4 6E-13 2.1E-17 105.4 9.7 104 10-136 279-386 (388)
91 1fnl_A Low affinity immunoglob 99.4 3.4E-12 1.2E-16 91.6 12.6 107 10-139 63-172 (175)
92 1qz1_A Neural cell adhesion mo 99.4 1.1E-12 3.6E-17 99.9 10.4 71 60-138 213-287 (291)
93 3lcy_A Titin; A-BAND, IG tande 99.4 1.2E-12 4E-17 94.0 10.1 89 43-139 4-99 (197)
94 2yd1_A Tyrosine-protein phosph 99.4 2.5E-12 8.7E-17 94.4 12.1 89 44-139 4-102 (212)
95 1x44_A Myosin-binding protein 99.4 5.8E-13 2E-17 88.5 7.7 84 46-140 7-97 (103)
96 2yd9_A Receptor-type tyrosine- 99.4 1.3E-12 4.3E-17 100.8 10.8 90 44-140 4-101 (304)
97 4hwu_A Fibroblast growth facto 99.4 7.4E-13 2.5E-17 86.6 8.1 68 60-138 18-86 (95)
98 2vr9_A Roundabout 1, ROBO; imm 99.4 4.6E-13 1.6E-17 98.3 7.8 72 60-138 125-204 (217)
99 2o26_X MAST/stem cell growth f 99.4 2E-12 6.9E-17 98.9 11.7 118 10-138 154-285 (290)
100 3lcy_A Titin; A-BAND, IG tande 99.4 4.8E-12 1.6E-16 90.7 12.9 71 60-138 120-193 (197)
101 3jz7_A MCAR, CAR, coxsackievir 99.4 8E-13 2.7E-17 95.8 8.8 69 60-137 138-208 (214)
102 3laf_A Deleted in colorectal c 99.4 2.6E-12 8.7E-17 102.0 12.4 121 10-139 186-311 (403)
103 2edk_A Myosin-binding protein 99.4 1.6E-13 5.4E-18 90.9 4.5 86 42-138 4-98 (101)
104 3ejj_X Macrophage colony-stimu 99.4 1.8E-12 6.2E-17 98.6 10.9 117 10-137 153-279 (289)
105 2eny_A Obscurin; beta-sandwich 99.4 3E-13 1E-17 90.8 5.8 89 44-142 6-100 (104)
106 1cs6_A Axonin-1; neural cell a 99.4 5.5E-13 1.9E-17 105.6 8.2 87 45-138 3-98 (382)
107 1sy6_A T-cell surface glycopro 99.4 3E-13 1E-17 100.5 6.1 70 61-139 131-202 (204)
108 2a38_A Titin; Z1Z2, structural 99.4 1.5E-12 5.1E-17 93.6 9.5 88 44-138 3-98 (194)
109 2yd9_A Receptor-type tyrosine- 99.4 3E-12 1E-16 98.7 11.9 120 11-138 74-200 (304)
110 2nzi_A Titin; IG-domain, FNIII 99.4 1.8E-12 6.2E-17 99.5 10.5 87 45-138 3-97 (305)
111 2lu7_A Obscurin-like protein 1 99.4 7.3E-13 2.5E-17 86.4 7.0 60 60-127 13-74 (84)
112 3m45_A Cell adhesion molecule 99.4 8.9E-13 3.1E-17 87.1 7.6 86 46-138 6-105 (108)
113 2rik_A Titin; I-SET IG fold, p 99.4 4.2E-12 1.4E-16 96.5 11.8 89 44-139 3-97 (284)
114 1ry7_B FGFR-3, fibroblast grow 99.4 1.6E-12 5.5E-17 101.1 9.5 122 10-141 189-329 (334)
115 3dmk_A DOWN syndrome cell adhe 99.4 1.2E-12 4.2E-17 113.5 9.7 116 10-140 686-809 (816)
116 2d3v_A Leukocyte immunoglobuli 99.4 1.1E-12 3.9E-17 95.7 8.1 107 10-129 67-181 (196)
117 3s35_X Vascular endothelial gr 99.4 2.2E-12 7.7E-17 87.7 8.8 75 60-141 25-112 (122)
118 2va4_A NCAM2, N-CAM 2, neural 99.4 2.7E-12 9.3E-17 91.9 9.6 107 10-130 67-183 (192)
119 3v2a_R Vascular endothelial gr 99.4 4.2E-14 1.4E-18 121.2 0.0 118 10-139 634-756 (772)
120 2va4_A NCAM2, N-CAM 2, neural 99.4 3.4E-12 1.2E-16 91.3 9.8 86 46-138 2-93 (192)
121 2c5d_C AXL oncogene, tyrosine- 99.4 2.3E-12 7.8E-17 93.2 8.9 86 46-138 2-102 (195)
122 1f97_A Junction adhesion molec 99.4 2.6E-12 9E-17 93.1 9.2 73 60-139 121-205 (212)
123 1f2q_A High affinity immunoglo 99.4 4.7E-12 1.6E-16 90.8 10.4 106 10-138 60-168 (176)
124 4f80_A Butyrophilin subfamily 99.4 1.7E-12 5.8E-17 96.4 8.2 71 61-137 136-211 (226)
125 2jll_A NCAM2, neural cell adhe 99.4 2.9E-12 9.8E-17 101.5 9.9 108 10-132 72-186 (389)
126 1ugn_A LIR1, leukocyte immunog 99.4 3.3E-12 1.1E-16 93.2 9.4 112 5-129 61-182 (198)
127 2ifg_A High affinity nerve gro 99.4 1.4E-12 4.7E-17 103.4 7.9 104 10-130 221-335 (347)
128 4i0k_A CD276 antigen; immunogl 99.4 7.2E-12 2.5E-16 92.1 10.9 117 10-138 81-205 (222)
129 3qs9_E FL cytokine receptor; i 99.3 2.1E-12 7.3E-17 109.0 9.0 109 10-138 299-413 (527)
130 2yuv_A Myosin-binding protein 99.3 9.8E-12 3.4E-16 82.0 10.3 83 44-139 5-95 (100)
131 3rbg_A Cytotoxic and regulator 99.3 1.5E-12 5.1E-17 89.6 6.6 75 60-141 18-103 (124)
132 2jll_A NCAM2, neural cell adhe 99.3 5.1E-12 1.8E-16 100.0 10.5 88 46-139 1-99 (389)
133 3sgj_C Human FCG3A receptor; r 99.3 1.1E-11 3.6E-16 92.0 11.6 106 10-138 63-171 (204)
134 3p2t_A Leukocyte immunoglobuli 99.3 2.4E-12 8.2E-17 93.8 7.9 116 10-138 67-193 (196)
135 4fom_A Poliovirus receptor-rel 99.3 1.1E-12 3.8E-17 101.1 6.1 113 10-139 181-300 (308)
136 2iep_A Muscle-specific kinase 99.3 2.2E-12 7.5E-17 92.5 7.2 82 45-133 6-91 (192)
137 1epf_A NCAM, protein (neural c 99.3 9.3E-12 3.2E-16 89.3 10.4 87 46-138 2-96 (191)
138 2cpc_A KIAA0657 protein; immun 99.3 6.9E-12 2.3E-16 84.1 9.0 84 44-139 8-100 (113)
139 3ojm_B Fibroblast growth facto 99.3 2.9E-12 1E-16 94.0 7.8 90 43-139 12-112 (231)
140 2x1w_L Vascular endothelial gr 99.3 8.2E-12 2.8E-16 92.3 10.2 116 10-138 73-206 (213)
141 2vr9_A Roundabout 1, ROBO; imm 99.3 8.4E-12 2.9E-16 91.4 10.1 84 43-133 6-98 (217)
142 2cr6_A KIAA1556 protein, obscu 99.3 2.6E-12 9E-17 87.1 6.8 85 46-141 13-104 (115)
143 2v5t_A NCAM2, N-CAM 2, neural 99.3 1.1E-11 3.7E-16 88.5 10.3 78 46-130 2-83 (189)
144 3u83_A Poliovirus receptor-rel 99.3 3E-12 1E-16 99.3 8.0 109 11-138 204-319 (331)
145 2nzi_A Titin; IG-domain, FNIII 99.3 5.4E-12 1.8E-16 96.8 9.2 75 60-141 121-199 (305)
146 1rhf_A Tyrosine-protein kinase 99.3 1.8E-12 6.1E-17 92.6 6.1 86 46-138 2-96 (182)
147 2k1m_A Myosin-binding protein 99.3 9E-12 3.1E-16 81.6 9.0 69 46-123 8-82 (95)
148 1hng_A CD2; T lymphocyte adhes 99.3 6E-12 2.1E-16 91.3 8.8 56 61-132 113-168 (176)
149 2y23_A Myomesin; structural pr 99.3 2.1E-12 7.1E-17 99.0 6.6 80 45-131 221-303 (312)
150 2ny1_B T-cell surface glycopro 99.3 2.2E-11 7.5E-16 87.5 11.5 68 60-142 114-182 (184)
151 1pd6_A Cardiac MYBP-C;, myosin 99.3 3.7E-12 1.3E-16 85.6 6.9 77 41-126 10-94 (104)
152 2v9r_A Roundabout homolog 1; p 99.3 1.2E-11 4E-16 89.9 10.1 91 43-135 6-103 (212)
153 1uct_A Immunoglobulin alpha FC 99.3 3.6E-12 1.2E-16 95.7 7.5 124 4-141 66-198 (218)
154 1nbq_A JAM, junctional adhesio 99.3 2.4E-12 8.1E-17 93.2 6.3 73 60-139 124-207 (209)
155 2dku_A KIAA1556 protein; beta- 99.3 6.6E-12 2.3E-16 83.0 7.9 87 43-142 5-98 (103)
156 1qz1_A Neural cell adhesion mo 99.3 1.4E-11 4.7E-16 93.7 10.5 87 46-138 2-96 (291)
157 1bih_A Hemolin; insect immunit 99.3 1.7E-12 5.8E-17 102.8 5.6 86 43-135 3-93 (395)
158 3ry4_A Low affinity immunoglob 99.3 2.3E-11 7.9E-16 86.0 10.9 106 10-138 60-168 (170)
159 4frw_A Poliovirus receptor-rel 99.3 1.5E-11 5.2E-16 88.7 9.9 63 61-130 136-201 (218)
160 3sbw_C Programmed cell death 1 99.3 1.3E-11 4.5E-16 90.5 9.7 72 61-138 134-210 (222)
161 1e07_A Carcinoembryonic antige 99.3 3.4E-11 1.2E-15 101.9 13.3 107 10-139 529-640 (642)
162 1dr9_A B7-1 (CD80), T lymphocy 99.3 3.6E-11 1.2E-15 87.3 11.7 110 10-130 74-191 (201)
163 2ec8_A MAST/stem cell growth f 99.3 8.5E-12 2.9E-16 103.2 9.2 114 10-138 282-410 (524)
164 2wv3_A Neuroplastin; igcam, me 99.3 9.8E-12 3.3E-16 89.6 8.3 84 45-139 2-91 (190)
165 2e7b_A Obscurin; IG-like domai 99.3 4.8E-12 1.6E-16 83.7 6.1 84 43-139 5-95 (103)
166 2wng_A Tyrosine-protein phosph 99.3 3.3E-11 1.1E-15 93.9 11.6 91 42-139 218-318 (327)
167 1vca_A VCAM-D1,2, human vascul 99.3 1.4E-11 4.9E-16 91.1 8.9 72 61-141 19-92 (202)
168 2edh_A Obscurin; structural ge 99.3 4E-11 1.4E-15 80.5 10.4 81 45-139 18-105 (113)
169 2gi7_A GPVI protein; IG-like d 99.3 9.1E-12 3.1E-16 90.3 7.5 120 4-138 54-182 (184)
170 2dm7_A KIAA1556 protein; beta- 99.3 1.3E-11 4.4E-16 82.3 7.4 84 43-139 5-94 (108)
171 4dkd_C Macrophage colony-stimu 99.3 5.6E-11 1.9E-15 90.4 11.3 118 10-138 153-280 (292)
172 2ifg_A High affinity nerve gro 99.3 5.7E-13 2E-17 105.7 0.2 122 2-130 108-239 (347)
173 2v44_A NCAM2, neural cell adhe 99.3 6.1E-11 2.1E-15 85.0 10.9 71 60-138 19-92 (189)
174 3grw_A Fibroblast growth facto 99.3 1.9E-11 6.6E-16 90.7 8.5 88 44-138 9-107 (241)
175 3p2t_A Leukocyte immunoglobuli 99.3 5.2E-12 1.8E-16 92.0 5.2 86 45-138 4-93 (196)
176 3qs7_E FL cytokine receptor; i 99.2 2.2E-11 7.6E-16 99.9 9.2 109 10-139 299-414 (423)
177 1oll_A NK receptor; immune sys 99.2 8.7E-12 3E-16 90.7 6.1 114 10-138 66-185 (188)
178 3oq3_B IFN-alpha/beta binding 99.2 2.9E-11 9.8E-16 94.7 9.1 106 10-130 98-210 (329)
179 2gi7_A GPVI protein; IG-like d 99.2 2E-11 6.8E-16 88.5 7.5 80 43-138 5-87 (184)
180 3p3y_A Neurofascin; IG domains 99.2 2.9E-11 1E-15 95.7 8.9 93 43-138 13-111 (404)
181 3d9a_L Light chain of hyhel10 99.2 2.7E-11 9.2E-16 88.6 7.9 110 10-130 80-203 (213)
182 3oq3_B IFN-alpha/beta binding 99.2 1.2E-10 4.1E-15 91.2 12.1 71 60-137 245-328 (329)
183 2ocw_A Polymeric-immunoglobuli 99.2 6.9E-11 2.4E-15 98.7 11.2 72 60-138 459-543 (585)
184 1f97_A Junction adhesion molec 99.2 6.3E-11 2.2E-15 85.7 9.5 77 60-142 18-106 (212)
185 2ghw_B Anti-SARS SCFV antibody 99.2 7.5E-11 2.6E-15 88.4 10.2 87 46-138 135-241 (247)
186 1z9m_A GAPA225; nectin-like, I 99.2 2E-11 6.9E-16 85.9 6.6 78 61-145 56-144 (145)
187 1e07_A Carcinoembryonic antige 99.2 1E-10 3.5E-15 98.9 12.1 119 10-139 435-557 (642)
188 2wim_A N-CAM 2, NCAM2, neural 99.2 1.1E-10 3.8E-15 88.7 11.1 86 45-138 3-94 (291)
189 2xot_A Amphoterin-induced prot 99.2 4.9E-11 1.7E-15 95.7 9.4 71 61-138 264-336 (361)
190 1lk3_L 9D7 light chain; antige 99.2 5.6E-11 1.9E-15 87.0 9.0 114 10-134 79-207 (210)
191 3uto_A Twitchin; kinase, muscl 99.2 1E-10 3.4E-15 100.1 11.9 88 43-137 479-572 (573)
192 2pet_A Lutheran blood group gl 99.2 9.3E-11 3.2E-15 86.3 10.2 117 10-137 86-227 (231)
193 2d3v_A Leukocyte immunoglobuli 99.2 9.5E-12 3.2E-16 90.7 4.7 86 45-138 4-93 (196)
194 3rbs_A Myomesin-1; immunoglobu 99.2 3.1E-11 1E-15 90.0 7.6 76 46-130 3-85 (207)
195 2zg1_A Sialic acid-binding IG- 99.2 8.7E-11 3E-15 85.8 9.7 117 5-138 85-212 (214)
196 3k0w_A Mucosa-associated lymph 99.2 4.9E-11 1.7E-15 88.3 8.1 80 44-137 16-98 (218)
197 2e6q_A Obscurin-like protein 1 99.2 1.1E-10 3.6E-15 80.5 9.2 84 46-140 8-106 (112)
198 3mj8_L Stimulatory hamster ant 99.2 2.8E-11 9.6E-16 88.5 6.7 111 10-130 79-203 (213)
199 2y25_A Myomesin; structural pr 99.2 5E-11 1.7E-15 91.5 8.0 80 44-130 5-87 (317)
200 1c1e_H Catalytic antibody 1E9 99.2 8.2E-11 2.8E-15 86.7 8.8 112 10-130 88-210 (219)
201 4dep_C Interleukin-1 receptor 99.2 6.1E-11 2.1E-15 92.8 8.5 70 61-139 138-215 (349)
202 3o4o_C Interleukin-1 receptor 99.2 3.2E-11 1.1E-15 94.1 6.8 114 10-130 189-325 (339)
203 3bp6_B Programmed cell death 1 99.2 1.5E-10 5.2E-15 84.1 10.0 61 60-130 120-183 (202)
204 3nl4_L Antigen binding fragmen 99.2 8.8E-11 3E-15 85.9 8.7 113 5-128 74-200 (213)
205 3umt_A SCFV heavy chain and li 99.2 1.8E-10 6.3E-15 87.1 10.4 128 4-138 83-244 (256)
206 2fbj_H IGA-kappa J539 FAB (hea 99.2 5.5E-10 1.9E-14 83.0 12.7 117 10-135 88-216 (220)
207 4dep_C Interleukin-1 receptor 99.2 1.2E-11 4.1E-16 96.9 3.7 120 10-138 186-332 (349)
208 1nqb_A Single-chain antibody f 99.2 1.5E-10 5E-15 88.3 9.7 120 10-138 88-232 (256)
209 2ec8_A MAST/stem cell growth f 99.2 1.8E-10 6E-15 95.3 10.8 118 10-138 177-308 (524)
210 3uzq_A Anti-dengue MAB 4E11; d 99.2 1.3E-10 4.3E-15 87.9 9.1 133 4-143 82-248 (253)
211 1jbj_A CD3 epsilon and gamma e 99.2 4.5E-11 1.5E-15 87.1 6.3 55 61-130 125-179 (186)
212 1q9r_B S25-2 FAB (IGG1K) heavy 99.2 2.4E-10 8.2E-15 84.4 10.3 110 10-130 90-213 (222)
213 1hnf_A CD2; T lymphocyte adhes 99.2 3.3E-10 1.1E-14 83.3 11.0 70 46-136 108-177 (182)
214 2eo1_A OBSCN protein, cDNA FLJ 99.2 2.8E-11 9.5E-16 79.8 4.7 66 61-138 29-97 (102)
215 3juy_B 3B3 single chain varian 99.2 2E-10 6.9E-15 86.9 10.0 82 46-133 149-249 (256)
216 3bp6_B Programmed cell death 1 99.2 8.6E-11 2.9E-15 85.4 7.6 73 60-139 19-103 (202)
217 1q0x_L FAB 9B1, light chain; a 99.2 1.6E-10 5.6E-15 84.5 9.2 110 10-129 82-204 (212)
218 2xzc_L FAB A.17 light chain; i 99.2 1.7E-10 6E-15 84.7 9.2 111 10-130 81-205 (216)
219 2if7_A SLAM family member 6; N 99.2 5.7E-10 1.9E-14 81.6 11.9 105 10-135 79-186 (193)
220 1ry7_B FGFR-3, fibroblast grow 99.1 2.1E-11 7.3E-16 94.7 4.4 71 61-138 141-215 (334)
221 3pv7_A B7-H6, IG-like domain-c 99.1 1.8E-10 6.2E-15 86.3 9.2 120 4-138 84-223 (248)
222 1nbq_A JAM, junctional adhesio 99.1 1.6E-10 5.3E-15 83.5 8.5 78 60-143 21-110 (209)
223 3o4o_C Interleukin-1 receptor 99.1 3.2E-11 1.1E-15 94.1 5.1 90 43-139 15-117 (339)
224 1z7z_I Intercellular adhesion 99.1 2.7E-11 9.3E-16 98.1 4.8 60 61-138 388-448 (450)
225 2o26_X MAST/stem cell growth f 99.1 4.5E-11 1.6E-15 91.3 5.8 70 60-137 108-179 (290)
226 1nfd_E H57 FAB; complex (immun 99.1 1.7E-11 5.7E-16 89.8 3.0 79 45-130 112-202 (212)
227 3r06_A Anti-mouse CD3epsilon a 99.1 1.9E-10 6.6E-15 84.0 8.7 109 10-129 80-202 (213)
228 1uct_A Immunoglobulin alpha FC 99.1 8.3E-11 2.9E-15 88.1 6.9 87 44-138 7-99 (218)
229 3vh8_G Killer cell immunoglobu 99.1 4.7E-10 1.6E-14 87.0 11.3 113 4-129 76-199 (316)
230 3mj6_A Junctional adhesion mol 99.1 1.9E-10 6.4E-15 86.7 8.6 72 60-137 135-235 (268)
231 2rcj_C Light chain; immunoglob 99.1 4.1E-10 1.4E-14 93.1 11.4 109 10-130 187-306 (523)
232 2p1y_A Bispecific alpha/beta T 99.1 1.2E-10 4E-15 86.7 7.4 74 48-127 129-222 (238)
233 1itb_B Type 1 interleukin-1 re 99.1 1.1E-10 3.8E-15 89.9 7.4 70 60-137 120-198 (315)
234 1hng_A CD2; T lymphocyte adhes 99.1 2.3E-10 8E-15 82.8 8.7 71 61-138 14-96 (176)
235 2c1o_A IGK-C protein; FAB frag 99.1 1.4E-10 4.6E-15 87.3 7.7 110 10-130 122-245 (254)
236 1ugn_A LIR1, leukocyte immunog 99.1 3.4E-11 1.2E-15 87.7 4.2 76 45-128 4-83 (198)
237 3rjd_A High affinity immunoglo 99.1 6.1E-10 2.1E-14 83.2 11.0 110 10-137 140-258 (262)
238 1xau_A B- and T-lymphocyte att 99.1 1.1E-10 3.7E-15 80.7 6.1 76 60-141 31-116 (122)
239 4dkd_C Macrophage colony-stimu 99.1 7.5E-11 2.5E-15 89.7 5.7 113 10-138 60-178 (292)
240 3ejj_X Macrophage colony-stimu 99.1 4.2E-10 1.4E-14 85.4 9.8 114 10-138 60-180 (289)
241 2oz4_A Intercellular adhesion 99.1 2.8E-10 9.7E-15 86.2 8.9 60 61-138 203-263 (265)
242 1qok_A MFE-23 recombinant anti 99.1 3.3E-10 1.1E-14 87.4 9.4 86 46-138 162-267 (282)
243 4fmk_A Poliovirus receptor-rel 99.1 5.3E-10 1.8E-14 80.8 9.9 114 10-138 92-216 (225)
244 1gsm_A Madcam-1, mucosal addre 99.1 3E-10 1E-14 86.2 8.4 84 47-141 7-97 (210)
245 3sob_L Antibody light chain; b 99.1 3.6E-10 1.2E-14 83.5 8.6 119 5-134 97-231 (237)
246 3nl4_L Antigen binding fragmen 99.1 3.4E-10 1.1E-14 82.7 8.4 77 47-129 2-96 (213)
247 2wng_A Tyrosine-protein phosph 99.1 3.7E-10 1.3E-14 87.9 9.1 113 10-130 83-206 (327)
248 3d9a_H Heavy chain of hyhel10 99.1 7.5E-10 2.6E-14 81.1 10.2 108 10-130 87-204 (210)
249 3auv_A SC-DSFV derived from th 99.1 6.4E-10 2.2E-14 85.4 10.2 111 10-127 91-236 (276)
250 1nkr_A P58-CL42 KIR; inhibitor 99.1 4.3E-10 1.5E-14 82.2 8.7 109 4-127 65-184 (201)
251 3rjd_A High affinity immunoglo 99.1 2.6E-09 8.8E-14 79.7 13.1 106 10-138 57-166 (262)
252 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 8.6E-10 2.9E-14 83.6 10.6 90 44-140 135-249 (256)
253 1oll_A NK receptor; immune sys 99.1 1.4E-10 4.8E-15 84.2 6.0 86 45-138 3-92 (188)
254 3qs7_E FL cytokine receptor; i 99.1 7.2E-10 2.5E-14 90.9 10.9 70 60-138 244-322 (423)
255 1f3r_B FV antibody fragment; I 99.1 1.6E-10 5.5E-15 87.8 6.4 74 48-127 141-232 (257)
256 3tv3_L PGT128 light chain, IG 99.1 2.1E-10 7.3E-15 83.8 6.9 114 6-130 72-201 (211)
257 1p6f_A NKP46, natural cytotoxi 99.1 1.8E-10 6E-15 88.1 6.6 120 4-138 62-188 (242)
258 1qgc_4 Protein (immunoglobulin 99.1 4.1E-10 1.4E-14 90.5 8.7 110 10-130 84-207 (438)
259 2rcj_C Light chain; immunoglob 99.1 1E-09 3.5E-14 90.6 11.3 112 10-130 79-204 (523)
260 1wio_A CD4, T-cell surface gly 99.1 4.8E-10 1.6E-14 88.6 8.9 72 60-138 193-292 (363)
261 3eow_R Poliovirus receptor; im 99.1 3.8E-10 1.3E-14 83.1 7.8 114 10-137 87-210 (221)
262 2qsq_A Carcinoembryonic antige 99.1 1.4E-09 4.7E-14 74.4 10.0 75 60-140 17-108 (111)
263 4hwn_A FC receptor-like A; FCR 99.1 9.9E-10 3.4E-14 74.2 9.1 82 44-138 6-96 (108)
264 1pz5_B Heavy chain of FAB (SYA 99.1 8.7E-10 3E-14 81.3 9.5 111 10-130 90-211 (220)
265 2dru_A Chimera of CD48 antigen 99.1 1.5E-09 5.2E-14 79.0 10.6 55 61-132 118-173 (180)
266 2c1o_A IGK-C protein; FAB frag 99.1 3.3E-10 1.1E-14 85.2 7.2 105 10-131 13-140 (254)
267 3gkz_A Anti-methamphetamine si 99.1 9.6E-10 3.3E-14 83.0 9.8 133 5-144 89-254 (257)
268 3d9a_L Light chain of hyhel10 99.0 5.3E-10 1.8E-14 81.7 7.9 73 60-138 18-107 (213)
269 1jbj_A CD3 epsilon and gamma e 99.0 1.7E-10 5.7E-15 84.0 5.1 54 61-130 17-71 (186)
270 1ccz_A Protein (CD58); LFA-3, 99.0 2.1E-09 7.1E-14 77.7 10.8 92 10-130 69-161 (171)
271 1z7z_I Intercellular adhesion 99.0 5.6E-10 1.9E-14 90.3 8.6 76 46-129 85-167 (450)
272 3s96_B 3B5H10 FAB light chain; 99.0 1.7E-10 5.8E-15 84.4 5.0 114 10-130 84-210 (218)
273 3bkj_L WO2 IGG2A FAB fragment 99.0 4.5E-10 1.5E-14 84.7 7.1 110 10-130 118-241 (252)
274 1moe_A Anti-CEA MAB T84.66; an 99.0 3.5E-09 1.2E-13 78.7 11.9 115 5-126 78-220 (240)
275 2r15_A Myomesin-1; sarcomeric 99.0 1.3E-09 4.4E-14 79.0 9.3 65 60-131 19-86 (212)
276 3m8o_H Immunoglobulin A1 heavy 99.0 4.6E-09 1.6E-13 77.6 12.4 119 4-132 83-215 (221)
277 3qs9_E FL cytokine receptor; i 99.0 5.1E-10 1.7E-14 94.4 7.9 60 60-126 244-312 (527)
278 4fmk_A Poliovirus receptor-rel 99.0 6E-10 2E-14 80.6 7.2 70 60-135 18-114 (225)
279 2znx_A SCFV; fluorotryptohpan, 99.0 2.9E-09 9.9E-14 80.1 11.1 111 10-126 80-222 (242)
280 3r08_E T-cell surface glycopro 99.0 8.2E-11 2.8E-15 77.0 2.1 49 61-125 17-66 (82)
281 2ocw_A Polymeric-immunoglobuli 99.0 1.2E-09 4.2E-14 91.1 9.8 115 10-138 84-220 (585)
282 1jhl_L IGG1-kappa D11.15 FV (l 99.0 1.7E-09 5.7E-14 72.3 8.6 63 60-128 18-95 (108)
283 1lk3_L 9D7 light chain; antige 99.0 5.6E-10 1.9E-14 81.6 6.8 66 60-131 17-97 (210)
284 3r06_A Anti-mouse CD3epsilon a 99.0 9E-10 3.1E-14 80.4 7.9 79 47-131 2-98 (213)
285 3nl4_H Antigen binding fragmen 99.0 6.8E-10 2.3E-14 81.7 7.1 117 5-130 78-204 (215)
286 3sgj_C Human FCG3A receptor; r 99.0 1E-09 3.5E-14 81.1 8.1 70 45-129 6-79 (204)
287 3vh8_G Killer cell immunoglobu 99.0 9.2E-10 3.1E-14 85.4 8.0 113 10-138 183-310 (316)
288 1fnl_A Low affinity immunoglob 99.0 1.3E-09 4.5E-14 77.8 8.1 72 44-130 5-80 (175)
289 3esu_F Antibody 14B7* light ch 99.0 1.5E-09 5.1E-14 81.4 8.6 115 5-125 77-231 (250)
290 3bqu_C 3H6 FAB light chain; be 99.0 3.5E-10 1.2E-14 83.9 4.9 115 4-129 95-224 (233)
291 1hnf_A CD2; T lymphocyte adhes 99.0 1.4E-09 5E-14 79.8 8.1 74 61-140 17-103 (182)
292 2vsd_A CHIR AB1; immune system 99.0 5.4E-10 1.9E-14 75.0 5.2 85 45-138 4-93 (105)
293 1b6u_A KIR2DL3, P58 killer cel 99.0 1.5E-09 5.1E-14 83.8 8.3 109 4-127 64-183 (257)
294 4fa8_A Secreted protein BARF1; 99.0 7E-10 2.4E-14 82.7 6.2 73 60-139 10-105 (203)
295 1wio_A CD4, T-cell surface gly 99.0 1.9E-09 6.6E-14 85.1 9.0 64 60-138 113-177 (363)
296 1vca_A VCAM-D1,2, human vascul 99.0 8.9E-10 3.1E-14 81.3 6.6 64 60-130 108-180 (202)
297 2x1w_L Vascular endothelial gr 99.0 4.9E-10 1.7E-14 82.7 5.2 72 59-138 25-98 (213)
298 1dee_B IGM RF 2A2; FAB-IBP com 99.0 5.5E-09 1.9E-13 77.7 10.9 115 10-130 88-217 (223)
299 1nkr_A P58-CL42 KIR; inhibitor 99.0 1.1E-09 3.7E-14 80.1 6.9 75 45-127 7-86 (201)
300 3ux9_B SCFV antibody; five hel 99.0 4.3E-09 1.5E-13 79.2 10.3 62 60-127 151-236 (256)
301 2j6e_L IGM, FAB light chain; a 99.0 5.3E-10 1.8E-14 82.8 5.0 79 45-130 134-225 (234)
302 1svz_A Immunoglobulin;, single 99.0 3.9E-09 1.3E-13 79.1 9.8 111 10-126 85-228 (247)
303 2pet_A Lutheran blood group gl 99.0 5.2E-10 1.8E-14 82.2 4.7 77 60-142 17-117 (231)
304 1qgc_4 Protein (immunoglobulin 99.0 1.1E-09 3.9E-14 87.9 7.1 111 10-130 306-429 (438)
305 2v5y_A Receptor-type tyrosine- 98.9 1.1E-09 3.8E-14 94.7 7.2 90 45-142 164-263 (731)
306 1za6_B IGG heavy chain; immuno 98.9 3E-09 1E-13 83.7 9.0 108 10-130 88-207 (344)
307 1dn0_B IGM-kappa cold agglutin 98.9 1.4E-08 4.9E-13 76.1 12.2 121 10-136 87-224 (232)
308 1q0x_L FAB 9B1, light chain; a 98.9 1.8E-09 6.3E-14 78.8 7.0 66 60-131 17-100 (212)
309 3sob_L Antibody light chain; b 98.9 2.6E-09 9E-14 78.8 7.9 78 47-130 25-120 (237)
310 1h5b_A Murine T cell receptor 98.9 3.1E-09 1E-13 71.6 7.5 62 60-128 18-95 (113)
311 3r4d_A CEA-related cell adhesi 98.9 1E-08 3.5E-13 74.2 10.8 73 60-138 16-105 (208)
312 3jz7_A MCAR, CAR, coxsackievir 98.9 5E-09 1.7E-13 75.5 9.1 78 60-143 17-124 (214)
313 1ccz_A Protein (CD58); LFA-3, 98.9 2.1E-09 7.1E-14 77.7 7.0 72 60-140 12-95 (171)
314 4fom_A Poliovirus receptor-rel 98.9 6.1E-09 2.1E-13 80.0 9.7 69 61-136 132-205 (308)
315 3s97_C Contactin-1; carbonic a 98.9 2.1E-09 7.2E-14 77.0 6.5 64 60-130 25-92 (201)
316 3esu_F Antibody 14B7* light ch 98.9 3.1E-09 1.1E-13 79.6 7.7 66 60-131 21-101 (250)
317 3khq_A B-cell antigen receptor 98.9 4E-09 1.4E-13 73.9 7.5 73 48-128 19-101 (133)
318 1moe_A Anti-CEA MAB T84.66; an 98.9 3E-09 1E-13 79.1 7.2 73 60-138 18-111 (240)
319 1f2q_A High affinity immunoglo 98.9 1.1E-09 3.9E-14 78.1 4.5 71 45-130 3-77 (176)
320 3auv_A SC-DSFV derived from th 98.9 4.5E-09 1.5E-13 80.6 8.2 79 46-130 12-108 (276)
321 3mj8_L Stimulatory hamster ant 98.9 3E-09 1E-13 77.6 6.8 63 60-128 17-94 (213)
322 3udw_C Poliovirus receptor; PV 98.9 5.5E-09 1.9E-13 69.5 7.5 74 60-139 17-116 (118)
323 4f80_A Butyrophilin subfamily 98.9 1.6E-08 5.4E-13 74.7 10.7 64 61-130 22-109 (226)
324 2znx_A SCFV; fluorotryptohpan, 98.9 4.8E-09 1.7E-13 78.8 8.0 76 49-130 4-97 (242)
325 1mju_H Immunoglobulin MS6-12; 98.9 5.7E-09 2E-13 77.9 8.3 109 10-130 88-207 (227)
326 2fbo_J V1V2;, variable region- 98.9 3.3E-09 1.1E-13 78.7 6.8 64 60-130 19-116 (250)
327 4dzb_B Vbeta2 (MAIT T cell rec 98.9 1.9E-09 6.4E-14 80.7 5.3 110 10-129 86-220 (246)
328 2gjj_A A21 single-chain antibo 98.9 1.1E-08 3.7E-13 78.3 9.7 61 60-126 155-239 (264)
329 4fqp_A Poliovirus receptor; im 98.9 1.6E-08 5.5E-13 78.1 10.8 106 10-130 88-203 (313)
330 1mqk_L Antibody 7E2 FV fragmen 98.9 7.5E-09 2.6E-13 70.9 7.9 75 60-140 18-110 (120)
331 1op3_H FAB 2G12, heavy chain; 98.9 5.1E-09 1.7E-13 77.9 7.5 111 10-129 88-214 (225)
332 2gki_A Nuclease; anti-DNA anti 98.9 9.3E-09 3.2E-13 79.7 9.3 87 46-138 159-271 (291)
333 2y23_A Myomesin; structural pr 98.9 2.4E-09 8.4E-14 81.8 5.8 69 61-136 19-90 (312)
334 2vol_A Murine IGG FC; FC, zinc 98.9 1.2E-08 4E-13 75.1 9.3 112 10-129 77-197 (207)
335 3s96_B 3B5H10 FAB light chain; 98.9 4.5E-09 1.5E-13 76.8 6.8 63 60-128 17-99 (218)
336 1c1e_H Catalytic antibody 1E9 98.9 1.2E-08 4.1E-13 74.9 9.2 63 60-128 17-103 (219)
337 3mj6_A Junctional adhesion mol 98.9 7.4E-09 2.5E-13 77.9 8.0 74 60-139 22-120 (268)
338 2ptt_A CD48 antigen; CD244, CD 98.9 1.5E-08 5.1E-13 67.7 8.6 71 61-137 21-106 (110)
339 2if7_A SLAM family member 6; N 98.9 4.6E-09 1.6E-13 76.7 6.6 64 60-130 15-96 (193)
340 2aw2_A B and T lymphocyte atte 98.9 1.6E-08 5.5E-13 69.2 8.7 71 60-138 28-107 (120)
341 3bkj_L WO2 IGG2A FAB fragment 98.9 7.3E-09 2.5E-13 78.0 7.9 78 47-130 35-135 (252)
342 1hzh_H IGG, immunoglobulin hea 98.9 1.3E-08 4.6E-13 82.8 10.0 78 45-130 131-219 (457)
343 3u83_A Poliovirus receptor-rel 98.8 5.8E-09 2E-13 80.6 7.2 68 61-138 153-229 (331)
344 1p6f_A NKP46, natural cytotoxi 98.8 4.6E-09 1.6E-13 80.1 6.3 86 44-137 5-94 (242)
345 1pko_A Myelin oligodendrocyte 98.8 3.9E-08 1.3E-12 68.1 10.5 73 60-138 23-120 (139)
346 3q5y_A TCR N15 beta; IG, T cel 98.8 8.2E-09 2.8E-13 77.0 7.5 110 10-128 84-212 (240)
347 3ry4_A Low affinity immunoglob 98.8 8.1E-09 2.8E-13 72.7 7.0 70 46-130 4-77 (170)
348 1svz_A Immunoglobulin;, single 98.8 9.5E-09 3.2E-13 76.9 7.7 65 60-130 18-102 (247)
349 1f3r_B FV antibody fragment; I 98.8 1.1E-08 3.8E-13 77.5 8.0 62 61-128 18-102 (257)
350 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 1.2E-08 4.1E-13 77.8 8.3 72 49-126 154-254 (268)
351 3liz_H 4C3 monoclonal antibody 98.8 2.8E-08 9.6E-13 75.3 10.3 116 5-130 82-210 (253)
352 2q20_A VK1 O18/O8 germline lig 98.8 1E-08 3.5E-13 68.7 7.0 61 60-126 20-95 (109)
353 1igy_B IGG1 intact antibody MA 98.8 2.4E-08 8.2E-13 80.8 10.4 109 10-130 87-205 (434)
354 3sbw_C Programmed cell death 1 98.8 9.7E-09 3.3E-13 75.0 7.3 73 61-141 19-117 (222)
355 2rgs_A I, IG gamma-2B heavy ch 98.8 4.1E-09 1.4E-13 78.3 5.2 80 44-130 7-102 (218)
356 3bqu_C 3H6 FAB light chain; be 98.8 1.5E-09 5.1E-14 80.4 2.7 79 46-130 23-119 (233)
357 3bae_H WO2 IGG2A FAB fragment 98.8 2.7E-08 9.3E-13 74.0 9.6 78 45-130 129-216 (228)
358 3omz_A Human vdelta1 gamma del 98.8 5.2E-09 1.8E-13 79.2 5.7 76 47-128 3-103 (259)
359 2ghw_B Anti-SARS SCFV antibody 98.8 1.8E-08 6.2E-13 75.3 8.6 64 60-129 19-106 (247)
360 2rgs_A I, IG gamma-2B heavy ch 98.8 1.9E-08 6.6E-13 74.6 8.6 112 10-129 85-205 (218)
361 1eaj_A Coxsackie virus and ade 98.8 2.8E-08 9.6E-13 66.3 8.5 72 60-138 22-122 (126)
362 3d9a_H Heavy chain of hyhel10 98.8 1.1E-08 3.8E-13 74.8 6.9 62 60-127 17-101 (210)
363 3uzq_A Anti-dengue MAB 4E11; d 98.8 1.7E-08 5.7E-13 76.1 8.0 67 60-132 18-108 (253)
364 2vol_A Murine IGG FC; FC, zinc 98.8 4E-09 1.4E-13 77.6 4.4 76 48-130 4-94 (207)
365 3q0h_A T cell immunoreceptor w 98.8 5.8E-08 2E-12 66.1 9.8 76 60-142 20-111 (117)
366 1i8k_A Epidermal growth factor 98.8 1.7E-08 5.7E-13 67.4 6.8 62 60-127 18-94 (107)
367 1iga_A IGA1; immunoglobulin; N 98.8 6.6E-08 2.2E-12 79.3 11.8 85 45-136 126-222 (475)
368 1dr9_A B7-1 (CD80), T lymphocy 98.8 7.9E-09 2.7E-13 74.8 5.6 64 61-131 12-92 (201)
369 2wqr_A IG epsilon chain C regi 98.8 3E-08 1E-12 77.2 9.2 76 48-129 115-203 (323)
370 1igt_B IGG2A intact antibody - 98.8 3.5E-08 1.2E-12 80.0 9.8 111 10-130 88-209 (444)
371 1nqb_A Single-chain antibody f 98.8 1.8E-08 6.2E-13 76.6 7.7 64 60-129 17-104 (256)
372 2oz4_A Intercellular adhesion 98.8 3.3E-08 1.1E-12 74.7 9.0 69 60-139 20-97 (265)
373 3omz_A Human vdelta1 gamma del 98.8 3.7E-08 1.3E-12 74.4 9.2 75 46-126 136-231 (259)
374 2gjj_A A21 single-chain antibo 98.8 1.8E-08 6E-13 77.1 7.4 87 47-139 6-118 (264)
375 2e27_L Anti-ciguatoxin antibod 98.8 1.7E-08 5.7E-13 69.2 6.5 61 60-126 20-95 (119)
376 4frw_A Poliovirus receptor-rel 98.8 1.8E-08 6.3E-13 72.3 7.1 67 60-133 16-108 (218)
377 1qfw_M FV, antibody (anti beta 98.8 5.3E-08 1.8E-12 65.0 8.9 73 49-127 4-94 (108)
378 1c5d_H Monoclonal antibody aga 98.8 1E-07 3.5E-12 70.3 11.2 112 10-130 87-206 (215)
379 3o3u_N Maltose-binding peripla 98.8 9.5E-09 3.3E-13 86.0 6.1 71 61-138 384-466 (581)
380 1za6_B IGG heavy chain; immuno 98.7 1.9E-08 6.6E-13 79.1 7.5 73 60-138 17-114 (344)
381 3pv7_A B7-H6, IG-like domain-c 98.7 1.9E-08 6.6E-13 75.1 7.1 74 60-139 20-118 (248)
382 1x9q_A SCFV, 4M5.3 anti-fluore 98.7 3E-08 1E-12 75.5 8.3 78 46-129 15-115 (268)
383 3pl6_D MBP peptide / T-cell re 98.7 3.4E-08 1.2E-12 74.9 8.4 115 5-129 103-241 (268)
384 3o3u_N Maltose-binding peripla 98.7 7.4E-08 2.5E-12 80.5 11.2 110 10-130 441-567 (581)
385 1qok_A MFE-23 recombinant anti 98.7 3.6E-08 1.2E-12 75.8 8.5 63 60-128 43-129 (282)
386 4ei6_B Vbeta16 XV19 type II na 98.7 1.9E-08 6.5E-13 75.0 6.6 115 5-129 79-219 (245)
387 2wqr_A IG epsilon chain C regi 98.7 3.8E-08 1.3E-12 76.6 8.6 108 10-129 187-309 (323)
388 2ywz_A NEW antigen receptor va 98.7 3.9E-08 1.3E-12 66.2 7.4 61 60-126 17-88 (111)
389 1i1c_A IGG2A, IG gamma-2A chai 98.7 1.7E-08 5.9E-13 76.6 6.2 79 45-130 14-108 (239)
390 1nfd_E H57 FAB; complex (immun 98.7 2E-08 6.7E-13 73.3 6.3 61 60-126 16-91 (212)
391 2p1y_A Bispecific alpha/beta T 98.7 1.6E-08 5.5E-13 75.0 5.9 63 60-129 17-98 (238)
392 2w59_A IGY FCU3-4; immunoglobu 98.7 2.2E-08 7.7E-13 75.1 6.7 81 42-129 8-102 (231)
393 2dru_A Chimera of CD48 antigen 98.7 7.3E-08 2.5E-12 70.0 9.2 61 61-127 17-92 (180)
394 1l6x_A Immunoglobulin gamma-1 98.7 2.2E-08 7.6E-13 73.4 6.5 109 13-129 80-197 (207)
395 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.7 2E-08 6.7E-13 76.1 6.3 63 60-128 20-100 (256)
396 2ny1_B T-cell surface glycopro 98.7 1.3E-08 4.3E-13 72.9 5.0 64 61-130 13-94 (184)
397 1igt_B IGG2A intact antibody - 98.7 1.3E-08 4.4E-13 82.5 5.6 83 46-135 238-337 (444)
398 3fku_X Neutralizing antibody F 98.7 1.7E-08 6E-13 77.8 5.9 62 60-127 156-234 (280)
399 3v2a_R Vascular endothelial gr 98.7 1E-07 3.5E-12 81.5 11.3 73 60-139 241-326 (772)
400 3tv3_L PGT128 light chain, IG 98.7 1.9E-08 6.5E-13 73.3 5.8 60 61-128 18-92 (211)
401 3qhz_H Human monoclonal antibo 98.7 2.6E-08 8.8E-13 74.2 6.6 118 5-130 86-219 (232)
402 2zg1_A Sialic acid-binding IG- 98.7 8.2E-08 2.8E-12 69.8 9.0 64 60-129 17-107 (214)
403 1op3_H FAB 2G12, heavy chain; 98.7 4.5E-08 1.5E-12 72.7 7.7 63 60-128 17-103 (225)
404 1b6u_A KIR2DL3, P58 killer cel 98.7 1.2E-08 4.1E-13 78.7 4.6 75 45-127 6-85 (257)
405 1mju_H Immunoglobulin MS6-12; 98.7 5E-08 1.7E-12 72.7 7.6 63 60-128 17-103 (227)
406 3r0n_A Poliovirus receptor-rel 98.7 1.3E-07 4.4E-12 64.4 9.0 65 60-130 19-120 (128)
407 1l6x_A Immunoglobulin gamma-1 98.7 3.7E-08 1.3E-12 72.3 6.6 66 61-130 21-94 (207)
408 3bn9_D E2 FAB heavy chain; ant 98.7 3.3E-08 1.1E-12 76.0 6.5 112 10-129 88-219 (257)
409 1xt5_A Variable region-contain 98.7 9.2E-08 3.2E-12 65.4 8.1 62 60-127 21-115 (135)
410 3qib_D 2B4 beta chain; IG doma 98.7 3.8E-08 1.3E-12 74.8 6.6 117 5-129 104-244 (270)
411 4dzb_B Vbeta2 (MAIT T cell rec 98.7 3.4E-08 1.2E-12 73.7 6.1 63 60-128 18-101 (246)
412 1ncn_A T lymphocyte activation 98.7 1.4E-07 4.6E-12 62.8 8.4 64 61-130 12-95 (110)
413 2wbj_D OB TCR; transmembrane, 98.7 5.8E-08 2E-12 74.4 7.4 114 10-129 109-245 (279)
414 1q9r_B S25-2 FAB (IGG1K) heavy 98.7 6.7E-08 2.3E-12 71.1 7.5 62 61-128 18-105 (222)
415 2xzc_L FAB A.17 light chain; i 98.7 3E-08 1E-12 72.6 5.5 63 60-128 17-96 (216)
416 3nfj_J T cell receptor beta ch 98.7 7.9E-08 2.7E-12 71.8 8.0 62 60-127 18-97 (245)
417 1pz5_B Heavy chain of FAB (SYA 98.6 9E-08 3.1E-12 70.3 8.0 64 60-129 17-106 (220)
418 2d9c_A Signal-regulatory prote 98.6 1.4E-07 4.7E-12 65.4 8.5 79 60-144 25-126 (136)
419 3gkz_A Anti-methamphetamine si 98.6 1.6E-07 5.6E-12 70.6 9.6 76 45-126 7-108 (257)
420 3b5h_A Cervical EMMPRIN, HAB18 98.6 8.4E-08 2.9E-12 68.2 7.5 65 61-139 16-82 (184)
421 3umt_A SCFV heavy chain and li 98.6 9.7E-08 3.3E-12 72.0 8.1 61 60-126 19-103 (256)
422 3nfj_J T cell receptor beta ch 98.6 4.8E-08 1.6E-12 73.0 6.3 113 10-129 83-219 (245)
423 3tv3_H PGT128 heavy chain, IG 98.6 7.9E-08 2.7E-12 72.3 7.5 80 43-130 137-227 (239)
424 2jju_A Signal regulatory prote 98.6 4.7E-08 1.6E-12 67.3 5.7 62 60-127 20-97 (127)
425 3bae_H WO2 IGG2A FAB fragment 98.6 3.8E-08 1.3E-12 73.2 5.5 63 60-128 17-104 (228)
426 1bec_A 14.3.D T cell antigen r 98.6 1.9E-07 6.4E-12 69.9 9.3 115 10-127 81-210 (238)
427 1neu_A Myelin P0 protein; stru 98.6 1.2E-07 4.3E-12 63.7 7.5 73 60-138 16-116 (124)
428 1hxm_B Gamma-delta T-cell rece 98.6 1.3E-07 4.3E-12 71.1 8.3 69 60-137 149-227 (242)
429 4gos_A V-SET domain-containing 98.6 2.7E-07 9.1E-12 63.6 9.2 72 60-138 22-117 (125)
430 3juy_B 3B3 single chain varian 98.6 1.3E-07 4.6E-12 71.2 8.3 76 45-126 5-107 (256)
431 1i3g_L Antibody FV fragment; a 98.6 1.6E-07 5.3E-12 63.1 7.8 61 61-127 22-97 (111)
432 1olz_A Semaphorin 4D; developm 98.6 2.7E-08 9.1E-13 86.8 4.8 75 61-143 551-631 (663)
433 2j6e_L IGM, FAB light chain; a 98.6 7E-08 2.4E-12 71.2 6.3 62 61-128 37-115 (234)
434 1ow0_A IG alpha-1 chain C regi 98.6 2.7E-07 9.4E-12 68.1 9.4 110 10-128 75-199 (214)
435 1ypz_E T cell receptor delta, 98.6 1.8E-07 6.1E-12 69.2 8.3 64 60-130 134-199 (207)
436 4i0k_A CD276 antigen; immunogl 98.6 2.7E-08 9.3E-13 72.7 3.8 62 60-127 12-95 (222)
437 2edo_A CD48 antigen; beta-sand 98.6 1.5E-07 5.1E-12 64.5 7.3 78 61-144 22-115 (121)
438 2oyp_A Hepatitis A virus cellu 98.6 3.1E-07 1.1E-11 60.2 8.6 73 60-138 11-107 (109)
439 1sy6_A T-cell surface glycopro 98.6 8.7E-08 3E-12 70.7 6.4 53 61-128 21-73 (204)
440 2fbj_H IGA-kappa J539 FAB (hea 98.6 2.2E-07 7.5E-12 68.8 8.5 64 60-129 17-104 (220)
441 4ei6_B Vbeta16 XV19 type II na 98.6 3.2E-07 1.1E-11 68.3 9.4 60 60-126 19-98 (245)
442 4gjt_B Poliovirus receptor-rel 98.6 3.9E-07 1.3E-11 62.2 9.2 72 61-139 18-115 (123)
443 3to4_D NKT vbeta2 (mouse varia 98.6 1.1E-07 3.6E-12 71.8 6.8 117 4-127 76-217 (253)
444 4ffy_L DENV1-E111 single chain 98.6 1.3E-07 4.4E-12 65.0 6.6 73 60-138 18-111 (126)
445 2w59_A IGY FCU3-4; immunoglobu 98.6 2.1E-07 7E-12 69.7 8.3 108 11-129 87-217 (231)
446 1j05_L T84.66 antibody, anti-C 98.6 1.2E-07 3.9E-12 63.5 6.3 61 60-126 18-97 (111)
447 1i1c_A IGG2A, IG gamma-2A chai 98.6 3E-07 1E-11 69.6 9.3 112 10-129 91-211 (239)
448 2wbj_D OB TCR; transmembrane, 98.6 1.3E-07 4.6E-12 72.4 7.3 76 46-127 24-123 (279)
449 1c5d_H Monoclonal antibody aga 98.6 1.6E-07 5.4E-12 69.2 7.4 63 60-128 17-102 (215)
450 2xqy_G A13-D6.3 monoclonal ant 98.6 1.6E-07 5.4E-12 72.1 7.7 110 10-129 94-214 (261)
451 2d9q_B Granulocyte colony-stim 98.6 4.1E-08 1.4E-12 76.5 4.4 62 60-130 17-87 (313)
452 3mjg_X Beta-type platelet-deri 98.6 4.9E-08 1.7E-12 74.1 4.7 65 60-138 17-87 (289)
453 1u3h_A T-cell receptor alpha-c 98.0 7.9E-09 2.7E-13 69.4 0.0 60 61-126 17-93 (110)
454 3ux9_B SCFV antibody; five hel 98.6 6.4E-08 2.2E-12 72.7 5.0 64 60-129 19-99 (256)
455 3eow_R Poliovirus receptor; im 98.5 3.9E-08 1.3E-12 72.3 3.6 63 61-130 17-105 (221)
456 2coq_A NEW antigen receptor va 98.5 2.2E-07 7.7E-12 62.0 7.0 61 60-126 17-88 (108)
457 1ypz_F T-cell receptor gamma c 98.5 3.8E-07 1.3E-11 68.1 8.9 70 60-137 147-225 (230)
458 2yc1_B Single chain antibody f 98.5 3.1E-07 1.1E-11 65.5 7.8 75 47-127 17-109 (146)
459 1oga_E TRBC1, T-cell receptor 98.5 1.5E-07 5.3E-12 71.0 6.4 112 10-129 85-218 (252)
460 1dee_B IGM RF 2A2; FAB-IBP com 98.5 2.2E-07 7.5E-12 68.9 7.1 62 61-128 18-103 (223)
461 3nl4_H Antigen binding fragmen 98.5 4E-07 1.4E-11 66.7 8.3 63 60-128 16-99 (215)
462 1n26_A IL-6 receptor alpha cha 98.5 2.6E-07 9E-12 72.5 7.5 71 61-142 24-96 (325)
463 3u2s_H PG9 heavy chain; greek 98.5 2.9E-07 1E-11 70.0 7.5 85 43-135 138-234 (248)
464 3moq_A NEW antigen receptor va 98.5 5.1E-07 1.7E-11 62.8 8.0 64 60-129 17-91 (126)
465 1i1r_A GP130, interleukin-6 re 98.5 4.2E-07 1.4E-11 70.3 8.3 57 60-126 21-86 (303)
466 2or8_A Hepatitis A virus cellu 98.5 5.9E-07 2E-11 59.9 7.9 72 61-138 15-108 (116)
467 2yz1_A Tyrosine-protein phosph 98.5 1.5E-07 5.1E-12 63.6 4.9 62 60-127 24-101 (120)
468 1eeq_A Kappa-4 immunoglobulin 98.5 2.3E-07 7.8E-12 62.4 5.7 62 60-127 18-100 (114)
469 1iga_A IGA1; immunoglobulin; N 98.5 6.2E-07 2.1E-11 73.5 9.2 76 46-130 246-335 (475)
470 2xqy_G A13-D6.3 monoclonal ant 98.4 3.6E-07 1.2E-11 70.1 6.9 63 60-128 23-109 (261)
471 3q5y_A TCR N15 beta; IG, T cel 98.4 7.8E-07 2.7E-11 66.1 8.5 59 60-125 19-96 (240)
472 1hxm_B Gamma-delta T-cell rece 98.4 5.3E-07 1.8E-11 67.6 7.5 62 60-127 18-103 (242)
473 1sq2_N Novel antigen receptor; 98.4 4.9E-07 1.7E-11 61.0 6.5 61 60-126 17-88 (113)
474 2aty_A Complement receptor chi 98.4 1.6E-06 5.4E-11 69.7 10.4 111 11-129 243-362 (376)
475 3n9g_H FAB fragment of MAB CR4 98.4 1.2E-06 3.9E-11 65.3 9.0 117 4-130 81-215 (230)
476 3bn9_D E2 FAB heavy chain; ant 98.4 5.3E-07 1.8E-11 69.2 7.1 62 61-128 18-103 (257)
477 3m8o_H Immunoglobulin A1 heavy 98.4 9.6E-07 3.3E-11 64.9 8.1 62 60-127 17-104 (221)
478 1ypz_E T cell receptor delta, 98.4 1.4E-06 4.6E-11 64.4 8.7 61 61-128 19-95 (207)
479 2gki_A Nuclease; anti-DNA anti 98.4 4.2E-07 1.4E-11 70.3 6.0 62 60-127 39-124 (291)
480 2q87_A CMRF35-H antigen; all-b 98.4 1.3E-06 4.4E-11 58.1 7.5 75 60-140 13-107 (110)
481 1dlf_L Anti-dansyl immunoglobu 98.4 8.7E-07 3E-11 59.4 6.5 62 60-127 18-99 (113)
482 3fku_X Neutralizing antibody F 98.4 7.8E-07 2.7E-11 68.4 7.0 61 60-126 17-101 (280)
483 3pl6_D MBP peptide / T-cell re 98.4 9.4E-07 3.2E-11 66.8 7.4 60 60-126 43-122 (268)
484 1dn0_B IGM-kappa cold agglutin 98.4 1.1E-06 3.9E-11 65.6 7.7 60 60-125 17-99 (232)
485 1igy_B IGG1 intact antibody MA 98.4 1.2E-07 4.2E-12 76.6 2.4 73 60-138 16-113 (434)
486 1zox_A CLM-1; IG-superfamily, 98.4 2E-06 6.9E-11 57.3 8.0 71 61-138 19-107 (113)
487 1bec_A 14.3.D T cell antigen r 98.4 8.2E-07 2.8E-11 66.3 6.6 61 60-127 16-95 (238)
488 1hzh_H IGG, immunoglobulin hea 98.3 6.2E-07 2.1E-11 72.9 6.3 86 46-135 247-346 (457)
489 3to4_D NKT vbeta2 (mouse varia 98.3 9.5E-07 3.3E-11 66.5 6.8 63 60-128 18-98 (253)
490 1pew_A JTO2, A lambda-6 type i 98.3 5.7E-07 1.9E-11 60.0 4.9 62 60-127 17-95 (109)
491 1nko_A Sialic acid binding IG- 98.3 2.7E-06 9.1E-11 58.3 8.2 75 47-127 7-111 (132)
492 3u6r_L Antibody 1:7 (light cha 98.3 2E-06 6.8E-11 61.0 7.6 72 60-138 17-105 (143)
493 2aty_A Complement receptor chi 98.3 2E-06 7E-11 69.0 8.1 63 61-130 186-259 (376)
494 3noi_A Natural cytotoxicity tr 98.3 5.3E-07 1.8E-11 61.2 3.9 61 60-126 24-103 (120)
495 3rrq_A Protein PD-1, programme 98.3 1.2E-06 4.2E-11 60.5 5.8 64 61-130 19-101 (129)
496 1oaq_L Light chain; antibody, 98.3 1.5E-06 5.2E-11 58.9 5.9 72 61-138 18-109 (120)
497 2or7_A T-cell immunoglobulin a 98.3 1.8E-06 6.3E-11 57.8 6.2 72 60-138 14-107 (115)
498 1fo0_B Protein (BM3.3 T cell r 98.3 3.6E-06 1.2E-10 56.4 7.5 60 60-126 18-96 (112)
499 1hxm_A Gamma-delta T-cell rece 98.3 3.9E-06 1.3E-10 63.3 8.5 112 5-130 78-200 (229)
500 1tvd_A T cell receptor, ES204 98.2 2E-06 6.7E-11 57.8 6.0 61 60-126 17-98 (116)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.77 E-value=1.7e-18 Score=117.96 Aligned_cols=89 Identities=19% Similarity=0.203 Sum_probs=67.0
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeE
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~ 118 (145)
..||.|++.|.+ .... .+.|.|.+.|+|.|+|+|+ +||..+....+......++ +|.|.++..+ |+|.
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~-k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~ 83 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWE-KGGQQLAASERLSFPADGAEHGLLLTAALPT------DAGV 83 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEE-ETTEECCCCSSEECCEETTEEEEEESSCCGG------GCEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEE-ECcccccceeeEEEeecCceEEEEEecCChh------hCEE
Confidence 457999999988 3333 3999999999999999998 5888887544332222333 7999888655 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEEe
Q psy5697 119 YRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|+|.|+|.+|.+ .+..+.|..
T Consensus 84 Y~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 84 YVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEEEEEc
Confidence 999999999998 344566553
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.72 E-value=9.1e-18 Score=112.78 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=64.5
Q ss_pred CCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCc-eEEeeCC---cEEEcCCCCCCCCCCCCCe
Q psy5697 45 HYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDL-RIALSNG---SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~-~~~~~~G---sL~i~~~~~~~~~~~~d~G 117 (145)
.||.|...|.+ ....| +.|.|.+.|+|.|+|+|+ +||..+...... ..+...+ +|.|.++..+ |+|
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~-k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G 76 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWS-CGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQ------DGG 76 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEE-ETTEECCTTGGGTEEEEECSSEEEEEESSCCGG------GCE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEE-ECceEeeeeccceeeeecccceEEEEEcCCCcc------CCE
Confidence 46788777776 23333 899999999999999998 488888643322 2222222 7999887655 899
Q ss_pred EEEEEEEcCCCce-EEEEEEEEe
Q psy5697 118 VYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 118 ~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
.|+|.|+|.+|+. .+..+.|+.
T Consensus 77 ~Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 77 LYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEECCCEEEEEEEEEEEE
Confidence 9999999999997 444666653
No 3
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.2e-16 Score=105.61 Aligned_cols=89 Identities=13% Similarity=0.176 Sum_probs=68.3
Q ss_pred CCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 43 NEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
...+|.|+..|.+ ....| +.|.|.+.|+|.|.|+|++ ||..+...........+++|.|.++..+ |+|.|
T Consensus 5 ~~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y 77 (100)
T 2edj_A 5 SSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLK-EGFTFPGRDPRATIQEQGTLQIKNLRIS------DTGTY 77 (100)
T ss_dssp CCSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEE-SSSEESSSCSSCEECTTCCEEEESCCTT------TCCEE
T ss_pred CCCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEE-CCEECCCCCCCEEEcCCCEEEEccCCcc------cCEEE
Confidence 4568899988877 33333 8999999999999999985 7777763333345567889999988765 89999
Q ss_pred EEEEEcCCCce-EEEEEEEE
Q psy5697 120 RCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 120 ~C~A~N~~G~~-~s~~v~v~ 138 (145)
+|.|.|..|.. .+..+.|.
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 78 TCVATSSSGETSWSAVLDVT 97 (100)
T ss_dssp EEEEECSSCCCBCCEEEEEE
T ss_pred EEEEEcCCCCEEEEEEEEEe
Confidence 99999999987 44455554
No 4
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.69 E-value=2.7e-16 Score=104.22 Aligned_cols=91 Identities=13% Similarity=0.115 Sum_probs=67.0
Q ss_pred CCCCCCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~ 116 (145)
....+|.|+..|.+ ... ..+.|.|.+.|+|.|.|+|+ +||..+............+ +|.|.++..+ |+
T Consensus 4 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~-k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~ 76 (103)
T 3qp3_A 4 TLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWY-HNGVELQESSKIHYTNTSGVLTLEILDCHTD------DS 76 (103)
T ss_dssp TTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEE-ETTEECCCCSSEEEEEETTEEEEEECSCCGG------GC
T ss_pred CCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEE-ECCEECCCCCCEEEEECCCEEEEEEcCCCcc------cC
Confidence 34557888888876 222 33999999999999999998 4888876544333333333 6999887655 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|+|.|+|.+|.. .+..+.|..
T Consensus 77 G~Y~C~a~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 77 GTYRAVCTNYKGEASDYATLDVTG 100 (103)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEC
Confidence 99999999999998 444666654
No 5
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=4.3e-16 Score=105.49 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=66.8
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEee--CCcEEEcCCCCCCCCCCCCCeE
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALS--NGSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~--~GsL~i~~~~~~~~~~~~d~G~ 118 (145)
..+|.|+..|.+ .... .+.|.|.+.|+|.|+|+|++ ||..+....+...... +++|.|.++..+ |+|.
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~ 77 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQESEHMKVENSENGSKLTILAARQE------HCGC 77 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCCSSSEEEEECSSEEEEEETTCCTT------TCEE
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcCCCCEEEEEcCCEEEEEECCCChh------cCEE
Confidence 457888887776 2233 39999999999999999985 7777754433322222 347999888765 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEEeccC
Q psy5697 119 YRCRASNEAGVI-LSRFVHVKADSR 142 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~~~~~ 142 (145)
|+|.|+|..|.. .+..+.|...+.
T Consensus 78 Y~C~a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 78 YTLLVENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp EEEEEECSSCEEECCEEEEEECSCS
T ss_pred EEEEEEECCCcEEEEEEEEEECCCC
Confidence 999999999987 444666664443
No 6
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.67 E-value=8.4e-17 Score=105.35 Aligned_cols=78 Identities=15% Similarity=0.125 Sum_probs=55.1
Q ss_pred CCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCC--eEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 46 YPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNN--TVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 46 ~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg--~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
+|.|...+.+ ... ..+.|.|.+.|+|.|.|+|++ +| ..+............++|.|.++..+ |+|.|+
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~ 74 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTV-GDSGAALAPELLVDAKSSTTSIFFPSAKRA------DSGNYK 74 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEEC-STTTCBCSTTSEEEEETTEEEEECTTBCGG------GCEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEE-CCCCcccCCcEEEEecCCEEEEEECCCChh------cCEEEE
Confidence 5777655554 222 338999999999999999985 66 66643211111122347999887655 899999
Q ss_pred EEEEcCCCce
Q psy5697 121 CRASNEAGVI 130 (145)
Q Consensus 121 C~A~N~~G~~ 130 (145)
|.|+|..|..
T Consensus 75 C~a~N~~G~~ 84 (93)
T 1wit_A 75 LKVKNELGED 84 (93)
T ss_dssp EEEEETTEEE
T ss_pred EEEEcCCCeE
Confidence 9999999976
No 7
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=3.7e-16 Score=102.69 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=64.8
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEE-eeCC--cEEEcCCCCCCCCCCCCCe
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIA-LSNG--SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G 117 (145)
..+|.|+..|.+ .... .+.|.|.+.|.|.|.|+|+ +||..+......... ..++ +|.|.++..+ |+|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~-k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G 75 (99)
T 1g1c_A 3 MEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWY-KNGVKIERSDRIYWYWPEDNVCELVIRDVTGE------DSA 75 (99)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEE-ETTEECCCCSSEEEEEEETTEEEEEECSCCGG------GCE
T ss_pred CCCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEE-ECCEECCCCCCEEEEEcCCCEEEEEECCCCcC------CCE
Confidence 356888888877 2233 3899999999999999997 588887654433222 2344 7999888655 899
Q ss_pred EEEEEEEcCCCceE-EEEEEEE
Q psy5697 118 VYRCRASNEAGVIL-SRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~-s~~v~v~ 138 (145)
.|+|.|+|.+|... +..+.|.
T Consensus 76 ~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 76 SIMVKAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEECCCcEEEEEEEEEe
Confidence 99999999999984 3355554
No 8
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=103.05 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=63.8
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCe
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G 117 (145)
..+|.|+..|.+ .... .+.|.|.+.|+|.|.|+|++ +|..+...........++ +|.|.++..+ |+|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G 75 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVRPDQRRFAEEAEGGLCRLRILAAERG------DAG 75 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCBTTEEEEECGGGEEEEEESSCCGG------GCE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCCEEEEECCCCEEEEEEccCCcC------CCE
Confidence 356888888776 2233 38999999999999999985 778776443333333344 6999887655 899
Q ss_pred EEEEEEEcCCCce-EEEEEEEE
Q psy5697 118 VYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.|+|.|+|..|.. .+..+.|.
T Consensus 76 ~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 76 FYTCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEECCCceeEEEEEEEE
Confidence 9999999999997 33344443
No 9
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.67 E-value=2.9e-16 Score=107.54 Aligned_cols=96 Identities=21% Similarity=0.259 Sum_probs=70.3
Q ss_pred CCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeC--C--cEEEcCCCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSN--G--SLMFPPFPETGFRPDV 114 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~--G--sL~i~~~~~~~~~~~~ 114 (145)
....+|.|++.|.+ ....| +.|.|.+.|.|.|.|+|++ +|..+........+..+ | +|.|.++..+
T Consensus 11 ~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------ 83 (116)
T 2kkq_A 11 EHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQFNTDRISLYQDNTGRVTLLIKDVNKK------ 83 (116)
T ss_dssp CCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECCCCBTTEEEEECTTCEEEEEEEEECGG------
T ss_pred CCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECcCCCCeEEEEeCCCCeEEEEECCCCcc------
Confidence 34567889888887 33344 8999999999999999985 77777643223333333 3 7999988765
Q ss_pred CCeEEEEEEEcCCCce-EEEEEEEEeccCCC
Q psy5697 115 HSTVYRCRASNEAGVI-LSRFVHVKADSRIP 144 (145)
Q Consensus 115 d~G~Y~C~A~N~~G~~-~s~~v~v~~~~~~p 144 (145)
|+|.|+|.|+|..|.. .+..+.|...+..+
T Consensus 84 D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 84 DAGWYTVSAVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEECCSCCC
T ss_pred cCEEEEEEEEcCCCeEEEEEEEEEeCCCCCC
Confidence 8999999999999997 44466776554443
No 10
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.66 E-value=2.3e-16 Score=111.47 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=55.0
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEe---------eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIAL---------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~---------~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
...|+|.+.|+|+|+|+|+ +||.++...+...... ..|+|.|.++... |+|.|+|+|+|.+|.+
T Consensus 17 ~~~l~c~v~G~P~P~I~W~-knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~YtC~A~N~~G~~ 89 (126)
T 1he7_A 17 HWCIPFSVDGQPAPSLRWL-FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHV------NNGNYTLLAANPFGQA 89 (126)
T ss_dssp EEEEEEEECCSSCCEEEEE-ETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGG------GCEEEEEEEEETTEEE
T ss_pred cEEEEEEEeeeCCCeEEEE-ECCEECCCCCceeEEEeeccccccccceEEEECcCCCC------CCEEEEEEEEECCCeE
Confidence 3889999999999999998 5899987654332221 1368999887655 8999999999999997
Q ss_pred -EEEEEEEE
Q psy5697 131 -LSRFVHVK 138 (145)
Q Consensus 131 -~s~~v~v~ 138 (145)
.+..+.|.
T Consensus 90 ~~t~~l~v~ 98 (126)
T 1he7_A 90 SASIMAAFM 98 (126)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEEEE
Confidence 33345444
No 11
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.66 E-value=3.7e-16 Score=102.91 Aligned_cols=86 Identities=19% Similarity=0.229 Sum_probs=61.8
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCce-EEeeCC--cEEEcCCCCCCCCCCCCCeEE
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLR-IALSNG--SLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~-~~~~~G--sL~i~~~~~~~~~~~~d~G~Y 119 (145)
+|.|+..|.+ .. +..+.|.|.+.|+|.|.|+|++ ||..+....... ....+| +|.|.++..+ |+|.|
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y 77 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSDDLHKMIVSEKGLHSLIFEVVRAS------DAGAY 77 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCCSSSCEEEETTTEEEEEESSCCGG------GCEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCCCcEEEEEcCCCeEEEEECCCCcc------cCEEE
Confidence 5666666655 22 2338999999999999999984 888876543333 334455 8999887655 89999
Q ss_pred EEEEEcCCCce-EEEEEEEE
Q psy5697 120 RCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 120 ~C~A~N~~G~~-~s~~v~v~ 138 (145)
+|.|+|..|.. .+..+.|.
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 78 ACVAKNRAGEATFTVQLDVL 97 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEcCCCeEEEEEEEEEE
Confidence 99999999996 33344444
No 12
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.65 E-value=9.2e-16 Score=100.63 Aligned_cols=88 Identities=16% Similarity=0.193 Sum_probs=65.1
Q ss_pred CCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeE
Q psy5697 44 EHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~ 118 (145)
..+|.|+..|.+ .. +..+.|.|.+.|.|.|.|+|++ ||..+...........++ +|.|.++..+ |+|.
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~ 76 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQGGKYKLSEDKGGFFLEIHKTDTS------DSGL 76 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCSSSSEEEEEETTEEEEEECSCCGG------GCEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcCCCCEEEEEeCCEEEEEECCCCcc------cCEE
Confidence 346788888876 22 2339999999999999999985 888876544333333334 7999887655 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEE
Q psy5697 119 YRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|+|..|.. .+..+.|+
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 77 YTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeCCCcEeEEEEEEEE
Confidence 999999999997 44455554
No 13
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=2.7e-16 Score=107.09 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=68.4
Q ss_pred CCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 43 NEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
...+|.|+..|.+ ....| +.|.|.+.|+|.|.|+|++ ||..+...........+|+|.|.++..+ |+|.|
T Consensus 5 ~~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~g~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y 77 (118)
T 2eo9_A 5 SSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRK-DGVLVSTQDSRIKQLENGVLQIRYAKLG------DTGRY 77 (118)
T ss_dssp CCCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEE-SSSBCCTTSTTEEEEETTEEEEESCCGG------GCCCE
T ss_pred CCCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcCCCCeEEEccCCEEEEccCCcC------CCEEE
Confidence 3457888777776 23333 8999999999999999985 7777754333445667889999988765 89999
Q ss_pred EEEEEcCCCce-EEEEEEEEe
Q psy5697 120 RCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 120 ~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+|.|+|..|.. .+..+.|..
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~ 98 (118)
T 2eo9_A 78 TCIASTPSGEATWSAYIEVQE 98 (118)
T ss_dssp EEEEECSSCEEEEECCEEEEC
T ss_pred EEEEEcCCCcEEEEEEEEEEe
Confidence 99999999997 334566653
No 14
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.64 E-value=2.9e-16 Score=117.69 Aligned_cols=108 Identities=8% Similarity=0.006 Sum_probs=65.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+...... .........||.+...|.+ ....| +.|.|.+.|+|+|+|+|++.||....
T Consensus 78 ~~D~G~Y~C~a~n~~g~~~--------~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~ 149 (203)
T 4fa8_A 78 ISHDGNYLCRMKLGETEVT--------KQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPA 149 (203)
T ss_dssp GGGCEEEEEEEEETTEEEE--------EEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------
T ss_pred HHHCeEEEEEEEcCCCcEE--------EEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecC
Confidence 4566677776544322221 1111222346677666655 33333 89999999999999999876664432
Q ss_pred c-c-cCceEEeeCCcEEEc---CCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 87 Y-V-KDLRIALSNGSLMFP---PFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 87 ~-~-~~~~~~~~~GsL~i~---~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
. . .....+..+|+|.|. ++..+ |+|.|+|+|+|.+|++.
T Consensus 150 ~~~~~~r~~~~~~g~l~il~i~~v~~~------D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 150 PTAANGGVMKEKDGSLSVAVDLSLPKP------WHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp ------CCEECTTSCEEEEEEEEECSS------CCCCEEEEEESSSCEEE
T ss_pred cccccceEEEeCCCCEEEEEECCCCHH------HCEEEEEEEEcCCCEEE
Confidence 1 1 122356678887764 45443 89999999999999974
No 15
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=103.85 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=67.2
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeeccc----CceEEeeCCcEEEcCCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVK----DLRIALSNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~----~~~~~~~~GsL~i~~~~~~~~~~~~d~ 116 (145)
..+|.|...|.+ .... .+.|.|.+.|+|.|.|+|++ +|..+.... .......+|++.+..+..... ...|+
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v-~~~D~ 84 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRK-SRPDE 84 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCSSCSEEECTTSCEEESSCCCBTT-BCSSC
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEE-CCEeccccCCCCcceeEEecCCcEEEEEEEeCCC-CcCcC
Confidence 457888888877 2233 38999999999999999985 777765322 123556788888876532111 12389
Q ss_pred eEEEEEEEcCCCceEEEEEEEE
Q psy5697 117 TVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|.|+|.|+|.+|+..+..+.+.
T Consensus 85 G~Y~C~a~N~~G~~~s~~~~l~ 106 (117)
T 2v9t_A 85 GVYVCVARNYLGEAVSHDASLE 106 (117)
T ss_dssp EEEEEEEEETTEEEECCCEEEE
T ss_pred EEEEEEEEeCccceEeeeEEEE
Confidence 9999999999999977665555
No 16
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=7.3e-16 Score=103.59 Aligned_cols=95 Identities=18% Similarity=0.065 Sum_probs=67.9
Q ss_pred CCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEe--eCC--cEEEcCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIAL--SNG--SLMFPPFPETGFRPDVH 115 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~--~~G--sL~i~~~~~~~~~~~~d 115 (145)
...+|.|+..|.+ .... .+.|.|.+.|+|.|.|+|++ ||..+........+. .+| +|.|.++..+ |
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D 77 (110)
T 2dm2_A 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQISPKSDHYTIQRDLDGTCSLHTTASTLD------D 77 (110)
T ss_dssp CSCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCCTTCSSEEEEECTTCEEEEEESSCCTT------T
T ss_pred CCCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCCeEEEEECCCcEEEEEECCCChh------h
Confidence 3456777777766 2223 38999999999999999985 777776432222222 245 6999887665 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEeccCCC
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKADSRIP 144 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~~~~~p 144 (145)
+|.|+|.|+|.+|.. .+..+.|...+.-|
T Consensus 78 ~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 78 DGNYTIMAANPQGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp CSCCEEEEECTTCCEEECCCEEEECCSCCS
T ss_pred CEEEEEEEEECCCeEEEEEEEEEECCCCCC
Confidence 999999999999998 44467777655443
No 17
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.63 E-value=9.3e-16 Score=103.04 Aligned_cols=71 Identities=17% Similarity=0.065 Sum_probs=52.9
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceE-E--e----eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRI-A--L----SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LS 132 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~-~--~----~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s 132 (145)
+.|.|.+.|+|.|+|+|+ +||..+........ . . .+++|.|.++..+ |+|.|+|.|+|.+|+. .+
T Consensus 19 ~~~~c~v~G~P~P~i~W~-k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 19 WCIPFTVKGNPKPALQWF-YNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHM------NNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp EEEEEEEECSSCCEEEEE-ETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGG------GCEEEEEEEECSSCEEEEE
T ss_pred EEEEEEEEEeCCCEEEEE-ECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcc------cCEEEEEEEEeCCCcEeEE
Confidence 789999999999999997 58888875432211 1 1 1234999888665 8999999999999997 33
Q ss_pred EEEEEE
Q psy5697 133 RFVHVK 138 (145)
Q Consensus 133 ~~v~v~ 138 (145)
..+.|.
T Consensus 92 ~~l~V~ 97 (103)
T 1wwb_X 92 ISAHFM 97 (103)
T ss_dssp EEECCS
T ss_pred EEEEEC
Confidence 344443
No 18
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=5.1e-16 Score=102.37 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=61.8
Q ss_pred CCCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCe
Q psy5697 41 SENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 41 ~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G 117 (145)
.....+|.|...|.+ .... .+.|.|.+.|+|.|.|+|++ ||..+.... ......+++|.|.++..+ |+|
T Consensus 6 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~-~~~~~~~~~L~i~~v~~~------D~G 77 (99)
T 2yr3_A 6 SGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQYAR-STCEAGVAELHIQDALPE------DHG 77 (99)
T ss_dssp SCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCSSCC-CEEETTEEEEEECSCCTT------CCB
T ss_pred CCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECcccc-eEeeCCeEEEEECCCChh------hCE
Confidence 345667888888877 2233 38999999999999999985 777765322 222233358999888765 899
Q ss_pred EEEEEEEcCCCce
Q psy5697 118 VYRCRASNEAGVI 130 (145)
Q Consensus 118 ~Y~C~A~N~~G~~ 130 (145)
.|+|.|+|..|..
T Consensus 78 ~Y~C~a~N~~g~~ 90 (99)
T 2yr3_A 78 TYTCLAENALGQV 90 (99)
T ss_dssp CEEEEEECSSCEE
T ss_pred EEEEEEEECCCeE
Confidence 9999999999986
No 19
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.63 E-value=4.3e-16 Score=103.92 Aligned_cols=92 Identities=13% Similarity=0.177 Sum_probs=56.7
Q ss_pred CCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 44 EHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
..+|.|+..|.+ .. +..+.|.|.+.|+|.|.|+|++ +|..+...........+++|.|.++..+ |+|.|+
T Consensus 8 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~ 80 (108)
T 3kvq_A 8 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVEDSGIVLKDGNRNLTIRRVRKE------DEGLYT 80 (108)
T ss_dssp ---CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEE-SSSBCCCBTTEEEETTTTEEEECSCCGG------GCEEEE
T ss_pred cCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEE-CCeEcccCCCeEEeCCCcEEEEeecCcc------cCEEEE
Confidence 446777666665 22 2339999999999999999985 6766654443334445678999988665 899999
Q ss_pred EEEEcCCCce-EEEEEEEEeccC
Q psy5697 121 CRASNEAGVI-LSRFVHVKADSR 142 (145)
Q Consensus 121 C~A~N~~G~~-~s~~v~v~~~~~ 142 (145)
|.|+|..|.. .+..+.|...+.
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 81 CQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EEEC----CEEEEEEEEEEC---
T ss_pred EEEEeCCCceEEEEEEEEeCCCc
Confidence 9999999998 455777765443
No 20
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=9.4e-16 Score=125.84 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=88.2
Q ss_pred cceeceeeeecCceeEeec--ccc------------CcccCCceeeeEEEec--cCCCCCCCEEEEcCCC-CCcc--CeE
Q psy5697 2 LNFHISTLLADADTYIIAD--RSL------------FPRPLGYLVGNIVYSS--RSENEHYPFRIKSAPG-GNRT--RGL 62 (145)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~--~~~------------~p~~~~~~~~~~~~~~--~~~~~~~P~~i~~p~~-~~~~--g~~ 62 (145)
|+++-|+|.|||++.|+.. ... .|..+.+.. +... ..-.+.+|.+...|.+ .+.. .++
T Consensus 284 L~L~~Np~~CdC~l~~l~~~~~~~~~~~~~~~~~C~~P~~l~g~~---l~~l~~~~~~C~~P~i~~~~~~~~v~~G~~v~ 360 (440)
T 3zyj_A 284 IHLHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRY---IGELDQNYFTCYAPVIVEPPADLNVTEGMAAE 360 (440)
T ss_dssp EECCSSCEECSSTTHHHHHHHHTTSCSSCSCCCBEEESTTTTTCB---CC----CCSCCCCCCEEECCCCEEECTTSCCE
T ss_pred EEcCCCCccCCCCchHHHHHHHhccccCCccccCCCChhHhcCcc---HhHhhhhhccCCCCcccccccceeeccCceEE
Confidence 4677899999999887642 111 344433222 2221 2235778988888776 2333 399
Q ss_pred EEeeEeccCCCEEEEEccCCeEeeccc--CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 63 ELTRQTRYEPSQLGWRFSNNTVIAYVK--DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 63 L~C~a~G~P~P~i~W~~~dg~~i~~~~--~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|.+ |.|+|.|+|++.+|..+.... .......+|+|.|.+++.+ |+|.|+|+|+|.+|+. .+..+.|..
T Consensus 361 L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~~~v~~ 433 (440)
T 3zyj_A 361 LKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQ------DTGMYTCMVSNSVGNTTASATLNVTG 433 (440)
T ss_dssp ECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCST------TCEEEEEEEECSSCEEEEEEEEEEC-
T ss_pred EEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChh------hCEEEEEEEEcCCCcEEEEEEEEEec
Confidence 99999 679999999876776655322 2335667899999998765 8999999999999998 555777765
Q ss_pred ccCC
Q psy5697 140 DSRI 143 (145)
Q Consensus 140 ~~~~ 143 (145)
..+-
T Consensus 434 ~~~~ 437 (440)
T 3zyj_A 434 THHH 437 (440)
T ss_dssp ----
T ss_pred cccc
Confidence 4443
No 21
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.63 E-value=1.1e-15 Score=122.51 Aligned_cols=113 Identities=18% Similarity=0.185 Sum_probs=80.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+...... .........+|.|+..+.+ .. +..+.|.|.+.|+|.|+|+|+ +||.++.
T Consensus 267 ~~D~G~Y~C~a~N~~G~~~--------~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~-k~g~~l~ 337 (384)
T 3kld_A 267 QEDAGSYECVAENSRGKNV--------AKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWL-KNGDPLL 337 (384)
T ss_dssp GGGCEEEEEEEEETTEEEE--------EEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEE-ETTEECC
T ss_pred hhhCEEEEEEEEcCCCeEE--------EEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEE-ECCEECC
Confidence 5677888887755443321 1112223346888887776 22 233899999999999999997 5888876
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
... +....+|+|.|..+..+ |+|.|+|.|+|.+|.+ .+..+.|.+
T Consensus 338 ~~~--~~~~~~~~L~i~~v~~~------D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 338 TRD--RIQIEQGTLNITIVNLS------DAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp CBT--TEEEETTEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCc--cEEEeCCEEEEeecChh------hCEEEEEEEEeCCceEEeceEEEEec
Confidence 433 34457889999988655 8999999999999998 555676653
No 22
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=8.6e-16 Score=102.90 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=69.3
Q ss_pred CCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceE-EeeCC--cEEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRI-ALSNG--SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~-~~~~G--sL~i~~~~~~~~~~~~d~ 116 (145)
...+|.|+..|.+ .... .+.|.|.+.|+|.|.|+|++ ||..+........ ...++ +|.|.++..+ |+
T Consensus 6 ~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~ 78 (110)
T 2dm3_A 6 SGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVRPDSAHKMLVRENGVHSLIIEPVTSR------DA 78 (110)
T ss_dssp CCCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCCCCSSEEEEECTTSCEEEEESSCCGG------GC
T ss_pred CCCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCceEEEEecCCeEEEEEeeCCcc------cC
Confidence 3467899888876 2233 38999999999999999974 7777654333322 33344 7999888665 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEeccCCC
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKADSRIP 144 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~~~~~p 144 (145)
|.|+|.|.|..|.. .+..+.|...+.-|
T Consensus 79 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 79 GIYTCIATNRAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp SBBCEEEECSSCEEEECCEEEEECCCCSS
T ss_pred EEEEEEEECCCCEEEEEEEEEEeCCCCCC
Confidence 99999999999996 44467777655544
No 23
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=2.7e-15 Score=99.83 Aligned_cols=88 Identities=19% Similarity=0.180 Sum_probs=65.7
Q ss_pred CCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~ 116 (145)
...+|.|+..|.+ .. +..+.|.|.+.|+|.|.|+|++ ||..+..... ..+..+| +|.|.++..+ |+
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~------D~ 81 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASER-LSFPADGAEHGLLLTAALPT------DA 81 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSS-EECCEETTEEEEEESSCCGG------GC
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCCCCc-EEEEeCCCEEEEEEccCCHH------hC
Confidence 4567899888877 22 2339999999999999999985 7887764432 3344455 7999888655 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEE
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|.|+|.|.|..|.. .+..+.|.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 82 GVYVCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEcCCCcEEEEEEEEEE
Confidence 99999999999986 33345554
No 24
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=1.4e-15 Score=103.67 Aligned_cols=81 Identities=19% Similarity=0.135 Sum_probs=59.1
Q ss_pred CCCCEEEEcCCCCCccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEe------eCCcEEEcCCCCCCCCCCCCCe
Q psy5697 44 EHYPFRIKSAPGGNRTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIAL------SNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 44 ~~~P~~i~~p~~~~~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~------~~GsL~i~~~~~~~~~~~~d~G 117 (145)
..+|.++..+......+..|.|.+.|+|.|.|+|+ +||..+.......... .+++|.|.++..+ |+|
T Consensus 6 ~~pP~i~~~~~~~~~~~~~l~C~~~g~P~p~i~W~-k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G 78 (118)
T 1wwc_A 6 YYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLHWL-HNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHY------NNG 78 (118)
T ss_dssp CCCCCCCCCCCCCCCCEEEEEEEEECSSCCEEEEE-ETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGG------GCE
T ss_pred ecCCceeccCCCeeccceEEEEEeeeeCCCeEEEE-ECCEECCCCCceeEEEeccCccccEEEEECCCChh------cCE
Confidence 45666555543333345789999999999999997 5888876543222221 3568999888655 899
Q ss_pred EEEEEEEcCCCceE
Q psy5697 118 VYRCRASNEAGVIL 131 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~ 131 (145)
.|+|.|+|.+|...
T Consensus 79 ~Y~C~a~N~~G~~~ 92 (118)
T 1wwc_A 79 NYTLIAKNPLGTAN 92 (118)
T ss_dssp EEEEEEEETTEEEE
T ss_pred EEEEEEECCCCeEe
Confidence 99999999999973
No 25
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.60 E-value=2.4e-15 Score=101.32 Aligned_cols=86 Identities=9% Similarity=-0.043 Sum_probs=57.7
Q ss_pred CCEEEEcCCC-CCcc--CeEEEeeEeccCC---CEEEEEccCCe-EeecccCce-EEe---------eCCcEEEcCCCCC
Q psy5697 46 YPFRIKSAPG-GNRT--RGLELTRQTRYEP---SQLGWRFSNNT-VIAYVKDLR-IAL---------SNGSLMFPPFPET 108 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~--g~~L~C~a~G~P~---P~i~W~~~dg~-~i~~~~~~~-~~~---------~~GsL~i~~~~~~ 108 (145)
.|.|+..|.+ .+.. .++|.|.+.|.|. |.|+|+| ++. .....+..+ ... .+++|.|.++..+
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFK-GKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEE-TTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEcc-CCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4677778876 2233 3999999999999 9999986 442 221111111 111 2458999988765
Q ss_pred CCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 109 GFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|+|.|+|.+|.. .+..+.|.
T Consensus 83 ------D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 ------FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp ------GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ------cCEEEEEEEecCCCceEEEEEEEEe
Confidence 8999999999999987 33355543
No 26
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.60 E-value=7.5e-15 Score=95.69 Aligned_cols=81 Identities=14% Similarity=0.057 Sum_probs=61.9
Q ss_pred CCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 46 YPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 46 ~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
++.|...|.+ ... ..+.|.|.+.|+|.|.|+|++ +|..+... .+++|.|.++..+ |+|.|+|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~C~ 68 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHE-------TKKLYMVPYVDLE------HQGTYWCH 68 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEE-TTEECTTC-------CSSEEEESSCCGG------GCEEEEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCcC-------CCCeEEECCCCHH------hCEEEEEE
Confidence 4667777766 222 338999999999999999985 77776432 2468999887655 89999999
Q ss_pred EEcCCCceEEEEEEEEec
Q psy5697 123 ASNEAGVILSRFVHVKAD 140 (145)
Q Consensus 123 A~N~~G~~~s~~v~v~~~ 140 (145)
|.|..|...+..+.|...
T Consensus 69 a~n~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 69 VYNDRDSQDSKKVEIIID 86 (91)
T ss_dssp EECSSCEEECCCEEEEEC
T ss_pred EEcCCCCEEeeeEEEEEe
Confidence 999999877666666543
No 27
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.60 E-value=1.3e-15 Score=132.36 Aligned_cols=97 Identities=33% Similarity=0.514 Sum_probs=79.1
Q ss_pred CCCCCEEEEcCCCC--C--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeE
Q psy5697 43 NEHYPFRIKSAPGG--N--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 43 ~~~~P~~i~~p~~~--~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~ 118 (145)
...+|.|+.+|.+. . +..+.|.|.|.|.|.|+|+|++.||..+...++.+....+|+|.|.++..++.++..|+|.
T Consensus 35 ~~~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g~l~i~~~~~~~~~~~~d~G~ 114 (816)
T 3dmk_A 35 DQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQV 114 (816)
T ss_dssp -CEEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEE
T ss_pred ccCCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeCCcEEEcCCChHHccccccceE
Confidence 45679999999872 2 3349999999999999999986689888765555677889999998887665444446999
Q ss_pred EEEEEEcCCCceEEEEEEEEe
Q psy5697 119 YRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 119 Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
|+|+|+|.+|++.|+.+.|+.
T Consensus 115 Y~C~a~n~~G~~~S~~~~v~~ 135 (816)
T 3dmk_A 115 YACLARNQFGSIISRDVHVRA 135 (816)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEecCcceEEccceEEEE
Confidence 999999999999999888874
No 28
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.60 E-value=2.7e-15 Score=98.84 Aligned_cols=80 Identities=14% Similarity=0.163 Sum_probs=58.6
Q ss_pred CCCCEEEEcCCC-----CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccC---ceEEeeCCcEEEcCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG-----GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKD---LRIALSNGSLMFPPFPETGFRPD 113 (145)
Q Consensus 44 ~~~P~~i~~p~~-----~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~---~~~~~~~GsL~i~~~~~~~~~~~ 113 (145)
..+|.|+..|.. ....| +.|.|.+.|.|.|.|+|+ +||..+..... ......+++|.|.++..+
T Consensus 2 ~~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~----- 75 (100)
T 3caf_A 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWL-KNGKEFKQEHRIGGYKVRNQHWSLIMESVVPS----- 75 (100)
T ss_dssp CEEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEE-ETTEECCGGGSTTCCEEEGGGTEEEECSCCGG-----
T ss_pred CCCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEE-ECCEEcccccccccEEEecCeEEEEEccCCcC-----
Confidence 346777766532 12223 899999999999999998 47887764332 123334558999988655
Q ss_pred CCCeEEEEEEEcCCCce
Q psy5697 114 VHSTVYRCRASNEAGVI 130 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|.|..|..
T Consensus 76 -D~G~Y~C~a~N~~g~~ 91 (100)
T 3caf_A 76 -DKGNYTCVVENEYGSI 91 (100)
T ss_dssp -GCEEEEEEEEETTEEE
T ss_pred -CCEEEEEEEEeCCCEE
Confidence 8999999999999996
No 29
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.60 E-value=6.9e-15 Score=104.98 Aligned_cols=94 Identities=15% Similarity=0.211 Sum_probs=68.4
Q ss_pred CCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEe-eCC--cEEEcCCCCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIAL-SNG--SLMFPPFPETGFRPDVH 115 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~-~~G--sL~i~~~~~~~~~~~~d 115 (145)
....+|.|+..|.+ ....| +.|.|.+.|+|.|.|+|++ ||..+.......... .+| +|.|.++..+ |
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D 109 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKESRHFQIDYDEEGNCSLTISEVCGD------D 109 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCSSSEEEEECTTCEEEEEESSCCGG------G
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCCCCcEEEEECCCCeEEEEECCCChh------c
Confidence 34467899988887 22333 8999999999999999985 888876543332222 233 8999888765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEeccC
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKADSR 142 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~~~~ 142 (145)
+|.|+|.|.|.+|.. .+..+.|...++
T Consensus 110 ~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 137 (154)
T 1fhg_A 110 DAKYTCKAVNSLGEATCTAELLVETMGK 137 (154)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC--
T ss_pred CEEEEEEEEECCCeEEEEEEEEEeCcCc
Confidence 999999999999997 445677765443
No 30
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.59 E-value=1.7e-14 Score=106.20 Aligned_cols=120 Identities=18% Similarity=0.163 Sum_probs=80.6
Q ss_pred ecCceeEeeccccCcc-cCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 11 ADADTYIIADRSLFPR-PLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 11 ~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
.|++.|.|...+.... ....+. -.|.........+|.+...|.. .. +..+.|.|.+.|+|.|+|+|++ ||..+.
T Consensus 75 ~d~G~Y~C~~~n~~g~~~~~~~~-l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~~~~~~ 152 (212)
T 2yd1_A 75 RDDAPYECVAENGVGDAVSADAT-LTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIK-NQTKVD 152 (212)
T ss_dssp TTCSEEEEEEECSSSCEEEEEEE-EEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEE-TTEECC
T ss_pred CcCceEEEEEEeCCCCeEEeeEE-EEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEE-CCeEcc
Confidence 6888888887654332 111111 0122222222334888888766 22 2339999999999999999984 788776
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE--EEEEEEe
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 139 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s--~~v~v~~ 139 (145)
... .+....+|+|.|.++..+ |+|.|+|.|+|.+|+..+ ..+.|+.
T Consensus 153 ~~~-~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 153 MSN-PRYSLKDGFLQIENSREE------DQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp TTS-TTEEEETTEEEECSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cCC-CeEEccCCeEEEccCChh------hCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 433 234566889999988655 899999999999999865 3566653
No 31
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.59 E-value=1.9e-14 Score=94.53 Aligned_cols=70 Identities=20% Similarity=0.355 Sum_probs=54.7
Q ss_pred eEEEeeEecc-CCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE-EEEE
Q psy5697 61 GLELTRQTRY-EPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVH 136 (145)
Q Consensus 61 ~~L~C~a~G~-P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s-~~v~ 136 (145)
+.|.|.+.|. |.|.|+|++ ++..+...........++ +|.|.++..+ |+|.|+|.|+|..|...+ ..+.
T Consensus 19 v~l~C~~~g~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~ 91 (97)
T 2bk8_A 19 VKYVCKIENYDQSTQVTWYF-GVRQLENSEKYEITYEDGVAILYVKDITKL------DDGTYRCKVVNDYGEDSSYAELF 91 (97)
T ss_dssp EEEEEEEESCCTTCEEEEEE-TTEECCSSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEEEEeccCCCCEEEEEE-CCEECcCCCCEEEEEcCCeEEEEEecCChh------hCeEEEEEEECCCCeEeEEEEEE
Confidence 8999999997 999999985 778776544333435667 8999888665 899999999999999743 3444
Q ss_pred E
Q psy5697 137 V 137 (145)
Q Consensus 137 v 137 (145)
|
T Consensus 92 V 92 (97)
T 2bk8_A 92 V 92 (97)
T ss_dssp E
T ss_pred E
Confidence 4
No 32
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.58 E-value=3.8e-15 Score=98.02 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=58.7
Q ss_pred CCCCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 44 EHYPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
..+|.|...|.+ ... ..+.|.|.+.|.| |.|+|++ ||..+.... +....+++|.|.++..+ |+|.|+
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k-~g~~~~~~~--~~~~~~~~L~i~~~~~~------D~G~Y~ 76 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLVESN--RTRITGEEVEVRDSIPA------DSGLYA 76 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEB-TTBCCCCCS--SEEECSSEEEESSCCGG------GSEEEE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEE-CCEecCCCC--CEEEeCCEEEECCCChH------HCEEEE
Confidence 455666666665 222 3389999999998 8999985 888775432 34445789999988765 899999
Q ss_pred EEEEcCCCce
Q psy5697 121 CRASNEAGVI 130 (145)
Q Consensus 121 C~A~N~~G~~ 130 (145)
|.|.|..|..
T Consensus 77 C~a~n~~g~~ 86 (95)
T 2ckn_A 77 CVTSSPSGSD 86 (95)
T ss_dssp EEEEETTEEE
T ss_pred EEeccCCCcE
Confidence 9999999986
No 33
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.58 E-value=3.1e-15 Score=97.92 Aligned_cols=87 Identities=11% Similarity=0.037 Sum_probs=60.4
Q ss_pred CCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeeccc-CceEEeeC---CcEEEcCCCCCCCCCCCCCe
Q psy5697 45 HYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVK-DLRIALSN---GSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~-~~~~~~~~---GsL~i~~~~~~~~~~~~d~G 117 (145)
.+|.|...|.+ .... .+.|.|.+.|+|.|.|+|++ ||..+.... .......+ ++|.|.++..+ |+|
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G 76 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQ------DGG 76 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEECSSEEEEEESSCCGG------GCE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEeecCCCCEEEEEecCCEEEEEEeecCcc------cCE
Confidence 35666666654 2222 38999999999999999985 788775322 12233333 57999887655 899
Q ss_pred EEEEEEEcCCCce-EEEEEEEE
Q psy5697 118 VYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.|+|.|+|..|.. .+..+.|+
T Consensus 77 ~Y~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 77 LYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEeCCCcEEEEEEEEEE
Confidence 9999999999995 33344443
No 34
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.58 E-value=3e-15 Score=100.86 Aligned_cols=90 Identities=7% Similarity=0.050 Sum_probs=65.4
Q ss_pred CCCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEee--CCcEEEcCCCCCCCCCCCC
Q psy5697 41 SENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALS--NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 41 ~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~--~GsL~i~~~~~~~~~~~~d 115 (145)
.....+|.|+..|.+ .... .+.|.|.+.|+|.|.|+|+ ++|..+........... +++|.|.++..+ |
T Consensus 9 ~~~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~-k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D 81 (106)
T 1nct_A 9 SKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWL-RKGQVLSTSARHQVTTTKYKSTFEISSVQAS------D 81 (106)
T ss_dssp CCSSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBC-SSSSCCTTCSSEEEEECSSEEEEEECCCCSS------C
T ss_pred CCCCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEE-ECCEECCCCCCEEEEECCCEEEEEECcCCch------h
Confidence 345667899999887 2333 3899999999999999997 57777654333222222 358999888765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEE
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
+|.|+|.|+|..|.. .+..+.|
T Consensus 82 ~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 82 EGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp CSEEEECCBCSSCBCCEEEEEEE
T ss_pred CEEEEEEEEeCCCeEEEEEEEEE
Confidence 999999999999996 3334443
No 35
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.57 E-value=2e-15 Score=119.73 Aligned_cols=94 Identities=33% Similarity=0.508 Sum_probs=73.0
Q ss_pred CCCEEEEcCCCC--C--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 45 HYPFRIKSAPGG--N--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 45 ~~P~~i~~p~~~--~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+|.|+.+|.+. . +..+.|.|.+.|+|.|+|+|++.||..+...++.+....+|+|.|.++..+|..++.|+|.|+
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~ 81 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYA 81 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEE
Confidence 468999999872 2 233999999999999999998768888775555556678899999988765333333599999
Q ss_pred EEEEcCCCceEEEEEEEE
Q psy5697 121 CRASNEAGVILSRFVHVK 138 (145)
Q Consensus 121 C~A~N~~G~~~s~~v~v~ 138 (145)
|.|+|..|...+..+.|.
T Consensus 82 C~a~n~~g~~~s~~~~v~ 99 (388)
T 2v5m_A 82 CLARNQFGSIISRDVHVR 99 (388)
T ss_dssp EEEEETTEEEECCCEEEE
T ss_pred EEEEccCCeEEecceEEE
Confidence 999999998766655555
No 36
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=3e-14 Score=96.99 Aligned_cols=70 Identities=10% Similarity=0.010 Sum_probs=53.3
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
+.|.|.+.|+|.|.|+|+ +||..+.. .+......++ +|.|.++..+ |+|.|+|.|+|..|.. .+..+.|
T Consensus 42 ~~l~C~~~g~P~p~i~W~-k~g~~l~~-~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 42 LNLVVPFQGKPRPQVVWT-KGGAPLDT-SRVHVRTSDFDTVFFVRQAARS------DSGEYELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp EEEEEEEEEESCCEEEEE-ETTEECCC-SSCEEEECSSEEEEEESSCCTT------TCEEEEEEEECSSCEECCEEEEEE
T ss_pred EEEEEEEccCCCCEEEEE-ECCEECCC-CcEEEEECCCeEEEEECCCChh------cCEEEEEEEEeCCCeEEEEEEEEE
Confidence 899999999999999998 58888752 2233333343 4999888765 8999999999999976 3445555
Q ss_pred E
Q psy5697 138 K 138 (145)
Q Consensus 138 ~ 138 (145)
.
T Consensus 114 ~ 114 (118)
T 2e7c_A 114 V 114 (118)
T ss_dssp E
T ss_pred E
Confidence 4
No 37
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.55 E-value=3.3e-14 Score=103.68 Aligned_cols=86 Identities=14% Similarity=0.091 Sum_probs=61.2
Q ss_pred CCEEEEcCCC--CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCeE
Q psy5697 46 YPFRIKSAPG--GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 46 ~P~~i~~p~~--~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~ 118 (145)
+|.++..++. .. +..+.|.|.+.|+|.|.|+|+ +||..+...........++ +|.|.++..+ |+|.
T Consensus 116 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~ 188 (212)
T 2r15_A 116 RARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWL-KNEKALAQTDHCNLKFEAGRTAYFTINGVSTA------DSGK 188 (212)
T ss_dssp SCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEE-ETTEEECCCSSEEEEEETTTEEEEEESSCCGG------GCEE
T ss_pred CCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEE-ECCeECccCCCEEEEEcCCCEEEEEEcCcchH------HCeE
Confidence 4545554443 22 233899999999999999997 5888887544433444434 8999887655 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEE
Q psy5697 119 YRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|+|.+|.. .+..+.|.
T Consensus 189 Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 189 YGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEcCCCcEEEEEEEEEE
Confidence 999999999997 33355554
No 38
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.55 E-value=4e-14 Score=104.34 Aligned_cols=120 Identities=14% Similarity=0.067 Sum_probs=74.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+.......... -.|..........|.+...|.. .. +..+.|.|.+.|+|.|+|+|+ +||..+.
T Consensus 73 ~~d~G~Y~C~a~n~~g~~~~~~~-l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~-~~g~~l~ 150 (212)
T 2yd6_A 73 PRDEAIYECVASNNVGEISVSTR-LTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWF-KDFLPVD 150 (212)
T ss_dssp TTTCEEEEEEEEETTEEEEEEEE-EEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEE-ETTEEC-
T ss_pred CCCCeEEEEEEEcCCCcEEEEEE-EEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEE-ECCcccc
Confidence 46778888877554333211111 0021112222345788887766 22 233999999999999999998 4788776
Q ss_pred ccc--CceEEee---CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy5697 87 YVK--DLRIALS---NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHV 137 (145)
Q Consensus 87 ~~~--~~~~~~~---~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v 137 (145)
... ....... .++|.|.++..+ |+|.|+|.|+|.+|+..+..+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~s~~a~l 200 (212)
T 2yd6_A 151 TSNNNGRIKQLRSESIGALQIEQSEES------DQGKYECVATNSAGTRYSAPANL 200 (212)
T ss_dssp -----CCEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEECCCEEE
T ss_pred CcCCCceEEEEecCCeEEEEEcCCCcc------cCEEEEEEEECCCCccccccccE
Confidence 431 1122222 358999887655 89999999999999985553333
No 39
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.55 E-value=3.1e-14 Score=94.36 Aligned_cols=83 Identities=13% Similarity=0.025 Sum_probs=60.9
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCe
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G 117 (145)
..+|.|++.+.+ .... .+.|.|.+.| |+|.|+|+ +||.++....+. .+..+| +|.|.++..+ |+|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~-k~g~~i~~~~~~-~i~~~g~~~~L~I~~v~~~------D~G 73 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWK-LKGQPLAASPDC-EIIEDGKKHILILHNCQLG------MTG 73 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEE-ETTEECCCBTTE-EEEEETTEEEEEECSCCGG------GCE
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEE-ECCEECcCCCCE-EEEEECCEEEEEECCCChh------hCE
Confidence 567889998888 3333 3999999988 56899998 589988755443 333334 7999988765 899
Q ss_pred EEEEEEEcCCCceEEEEEEEE
Q psy5697 118 VYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.|+|.|.|.. .++.+.|.
T Consensus 74 ~Y~C~a~n~~---~sa~L~V~ 91 (93)
T 1waa_A 74 EVSFQAANTK---SAANLKVK 91 (93)
T ss_dssp EEEEEETTEE---EEEEEEEE
T ss_pred EEEEEECCCc---EEEEEEEE
Confidence 9999999964 34455554
No 40
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.55 E-value=1.2e-13 Score=99.72 Aligned_cols=114 Identities=14% Similarity=0.191 Sum_probs=74.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEcc-CCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFS-NNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~-dg~~i 85 (145)
..|++.|.|...+. .. ... ........+|.+...+.. .. +..+.|.|.+.|+|.|.|+|++. +|..+
T Consensus 65 ~~d~G~Y~C~~~n~-~~----~~~----~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~ 135 (190)
T 2wv3_A 65 AEDSGEYHCVYHFV-SA----PKA----NATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFE 135 (190)
T ss_dssp GGGCEEEEEEEEET-TE----EEE----EEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEE
T ss_pred cccCEEEEEEEEeC-Cc----ccc----cEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCcee
Confidence 56778888877543 11 111 111223346877777665 22 23389999999999999999864 77776
Q ss_pred ec--ccCceEEeeCC---cEEEcCCC-CCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 86 AY--VKDLRIALSNG---SLMFPPFP-ETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 86 ~~--~~~~~~~~~~G---sL~i~~~~-~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.. ......+..++ +|.|.++. .+ |+|.|+|.|+|.+|.. .+..+.|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~~------d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 136 EISNSSGRFFIINKENYTELNIVNLQITE------DPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECCCTTSCEEEEECSSEEEEEECSCCTTT------SCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eeecCCCeEEEecCCCeeEEEEEeccccC------CCEEEEEEEEecCCcceeEEEEEEE
Confidence 52 11222333332 79998876 45 8999999999999997 44455554
No 41
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.54 E-value=3.2e-15 Score=123.00 Aligned_cols=128 Identities=21% Similarity=0.248 Sum_probs=85.8
Q ss_pred cceeceeeeecCceeEeeccc--------------cCcccCCceeeeEEEec--cCCCCCCCEEEEcCCC-CCccC--eE
Q psy5697 2 LNFHISTLLADADTYIIADRS--------------LFPRPLGYLVGNIVYSS--RSENEHYPFRIKSAPG-GNRTR--GL 62 (145)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--------------~~p~~~~~~~~~~~~~~--~~~~~~~P~~i~~p~~-~~~~g--~~ 62 (145)
|+++-|++.|||++.|+..-. ..|..+.+ ..+... ..-.+.+|.+...|.+ .+..| ++
T Consensus 295 L~L~~Np~~CdC~~~~l~~~l~~~~~~~~~~~~~C~~P~~l~g---~~l~~~~~~~~~C~~P~i~~~~~~~~v~~G~~~~ 371 (452)
T 3zyi_A 295 LHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRG---RYLVEVDQASFQCSAPFIMDAPRDLNISEGRMAE 371 (452)
T ss_dssp EECCSSCEECSTTTHHHHHHHHHHC---CCSSCBEEESTTTTT---CBTTSCCGGGCCCCCCCCSBCCCCEECCTTSCCE
T ss_pred EEccCCCcCCCCCchHHHHHHHHhCccCCccCcEeCCchHhcc---chhhccchhhhcccCcccccccccccccCCCEEE
Confidence 467789999999988753210 13443322 212111 1224678888877776 33333 99
Q ss_pred EEeeEeccCCCEEEEEccCCeEeeccc--CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 63 ELTRQTRYEPSQLGWRFSNNTVIAYVK--DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 63 L~C~a~G~P~P~i~W~~~dg~~i~~~~--~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|.+. |.|+|+|++.+|..+.... .......+|+|.|.++..+ |+|.|+|+|+|.+|.. .+..+.|..
T Consensus 372 l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~v~~ 443 (452)
T 3zyi_A 372 LKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLS------DTGVYTCMVTNVAGNSNASAYLNVST 443 (452)
T ss_dssp ECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTT------CCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred EEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHH------HCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 999998 9999999976777665321 1235667899999988765 8999999999999997 444666653
Q ss_pred c
Q psy5697 140 D 140 (145)
Q Consensus 140 ~ 140 (145)
.
T Consensus 444 ~ 444 (452)
T 3zyi_A 444 A 444 (452)
T ss_dssp -
T ss_pred c
Confidence 3
No 42
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.54 E-value=7.2e-14 Score=100.69 Aligned_cols=120 Identities=13% Similarity=0.042 Sum_probs=76.9
Q ss_pred eecCceeEeeccccCc-ccC-CceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFP-RPL-GYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p-~~~-~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~ 84 (145)
..|++.|.|......- ... .....-.+.........+|.+...++. .. +..+.|.|.+.|+|.|.|+|++ +|..
T Consensus 75 ~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~ 153 (201)
T 3s97_C 75 ASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRK-VLEP 153 (201)
T ss_dssp GGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTBC
T ss_pred cccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEe-CCCc
Confidence 5788888887755321 110 000101111122233456777766655 22 2338999999999999999985 6666
Q ss_pred eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 85 IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 85 i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+... .+....+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|+
T Consensus 154 ~~~~--~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 154 MPST--AEISTSGAVLKIFNIQLE------DEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCTT--CEEETTTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCc--eeecCCCCEEEEccCChh------hCEEEEEEEEecCCceeeeEEEEEe
Confidence 5432 344556779999988655 8999999999999998 34455554
No 43
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.54 E-value=5.9e-14 Score=101.03 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=73.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+...... ... .......+|.+...+.. .. +..+.|.|.+.|+|.|.|+|++ +|..+.
T Consensus 67 ~~d~G~Y~C~~~~~~g~~~---~~~----~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 138 (189)
T 2v44_A 67 IEDAGIYRCQATDAKGQTQ---EAT----VVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 138 (189)
T ss_dssp GGGCEEEEEEEECTTSCEE---EEE----EEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEE-EC--CE
T ss_pred cccCeEEEEEEEeCCCCcE---EEE----EEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEE-CCcEEe
Confidence 5677788887755432221 000 01122335666555544 22 2338999999999999999985 666654
Q ss_pred cc-cCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 87 YV-KDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 87 ~~-~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.. ........+++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 139 ~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 139 TISDNRFAMLANNNLQILNINKS------DEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp ECCCTTEEECTTSCEEETTCCGG------GCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred ccCCCCEEEecCCcEEEEEcCcc------cCeEEEEEEEccccCceeeeeEEEE
Confidence 32 22345567789999988665 8999999999999765 56666665
No 44
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.54 E-value=1.7e-14 Score=100.66 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=57.3
Q ss_pred cCCCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecc---------cCceEE------eeCCcEE
Q psy5697 40 RSENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYV---------KDLRIA------LSNGSLM 101 (145)
Q Consensus 40 ~~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~---------~~~~~~------~~~GsL~ 101 (145)
......+|.|+..|.+ .... .+.|.|.+.|.|.|.|+|++ +|..+... ...... ..+++|.
T Consensus 15 ~~~~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 93 (137)
T 3qr2_A 15 VPRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWF-EGQGPNDICSQLWDGARLDRVHIHATYHQHAASTIS 93 (137)
T ss_dssp ------CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEE-EESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEE
T ss_pred CCCCCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEE-CCCCccccceeecccCcccceEEecccccccceEEE
Confidence 4455678999999987 2233 39999999999999999986 44432110 001111 1356899
Q ss_pred EcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 102 FPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 102 i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
|.++..+ |+|.|+|.|.|..|..
T Consensus 94 I~~v~~~------D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 94 IDTLVEE------DTGTYECRASNDPDRN 116 (137)
T ss_dssp ECSCCGG------GCEEEEEEEECCTTSS
T ss_pred ECCCCcc------cCEEEEEEEEecCCcc
Confidence 9988765 8999999999999985
No 45
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.54 E-value=6.1e-15 Score=118.25 Aligned_cols=86 Identities=20% Similarity=0.292 Sum_probs=63.9
Q ss_pred CCCEEEEcCCCC----CccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCC-CCCCCCCCCCCe
Q psy5697 45 HYPFRIKSAPGG----NRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPF-PETGFRPDVHST 117 (145)
Q Consensus 45 ~~P~~i~~p~~~----~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~-~~~~~~~~~d~G 117 (145)
.+|+|+++|.+. ...| +.|.|.+.|+|.|+|+|+ +||.++......+....+|+|.|.+. ..+ |+|
T Consensus 4 ~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~-k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~------D~G 76 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWK-LNGTDVDIGMDFRYSVVDGSLLINNPNKTQ------DAG 76 (384)
T ss_dssp EEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEE-ETTEECCC----CEEEETTEEEEESCCHHH------HCE
T ss_pred CCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEE-ECCEECcCCCCccEEEECCEEEEcCCCCcc------cCE
Confidence 468999999872 1233 899999999999999997 58988864434455667899988764 322 899
Q ss_pred EEEEEEEcCCCceEEEEEEE
Q psy5697 118 VYRCRASNEAGVILSRFVHV 137 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v~v 137 (145)
.|+|.|+|.+|...++.+.+
T Consensus 77 ~Y~C~A~N~~G~~~s~~~~l 96 (384)
T 3kld_A 77 TYQCIATNSFGTIVSREAKL 96 (384)
T ss_dssp EEEEEEEETTEEEECCCEEE
T ss_pred EEEEEEEcCcccEEecceEE
Confidence 99999999999876544333
No 46
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.9e-14 Score=96.37 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=64.7
Q ss_pred CCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~ 116 (145)
.+.+|.|++.+.+ .... .+.|.|.+ .|.|.|+|+ +||..+....+. .+..+| +|.|.++..+ |+
T Consensus 4 ~~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~-k~g~~l~~~~r~-~i~~~~~~~~L~I~~v~~~------D~ 73 (100)
T 2yuz_A 4 GSSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWT-KNGLPVQESDRL-KVVQKGRIHKLVIANALTE------DE 73 (100)
T ss_dssp SSCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEE-ETTEECCCCSSE-EEEECSSEEEEEESSCCGG------GC
T ss_pred CCCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEE-ECCEECCCCCcE-EEEEeCCEEEEEECCCChh------hC
Confidence 4567788888877 2333 38999999 899999998 589888654433 333444 7999888765 89
Q ss_pred eEEEEEEEcCCCceEEEEEEEEeccC
Q psy5697 117 TVYRCRASNEAGVILSRFVHVKADSR 142 (145)
Q Consensus 117 G~Y~C~A~N~~G~~~s~~v~v~~~~~ 142 (145)
|.|+|.|+|. -...+..+.|...++
T Consensus 74 G~Y~C~a~N~-~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 74 GDYVFAPDAY-NVTLPAKVHVISGPS 98 (100)
T ss_dssp SEEEEEESSS-CCCEEEEEEEECCSC
T ss_pred EEEEEEEcCC-CeeEEEEEEEeCCCC
Confidence 9999999999 223566777775543
No 47
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.53 E-value=6.4e-14 Score=100.79 Aligned_cols=115 Identities=17% Similarity=0.118 Sum_probs=76.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+..... .... .......+|.+...|.. .... .+.|.|.+.|+|.|.|+|++ +|..+.
T Consensus 71 ~~d~G~Y~C~~~~~~~~~---~~~~----~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~ 142 (191)
T 1epf_A 71 IDDAGIYKCVVTAEDGTQ---SEAT----VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVI 142 (191)
T ss_dssp GGGCEEEEEEEEETTTEE---EEEE----EEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEE-TTEEGG
T ss_pred cccCEEEEEEEEcCCCcc---eEEE----EEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEE-CCEEee
Confidence 456777777764433110 0101 11222356788777765 2223 38999999999999999985 777775
Q ss_pred cccC-ceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc-eEEEEEEEE
Q psy5697 87 YVKD-LRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV-ILSRFVHVK 138 (145)
Q Consensus 87 ~~~~-~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~-~~s~~v~v~ 138 (145)
.... ......+++|.|.++..+ |+|.|+|.|+|.+|. ..+..+.|.
T Consensus 143 ~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 143 LKKDVRFIVLSNNYLQIRGIKKT------DEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp GGCCTTEEECTTSCEEETTCCGG------GCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred ccCCceEEEecCCeEEECCCChh------hCEEEEEEEEEecceeEEEEEEEEe
Confidence 3322 335566789999988665 899999999999954 466666664
No 48
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.53 E-value=2.4e-14 Score=102.90 Aligned_cols=114 Identities=14% Similarity=0.168 Sum_probs=76.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+........ ........+|.+...|.. .. +..+.|.|.+.|+|.|.|+|++ +|..+.
T Consensus 71 ~~d~G~Y~C~~~~~~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~ 142 (192)
T 2iep_A 71 DSDDGIYCCTANNGVGGAVES-------CGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSALR 142 (192)
T ss_dssp GGGCEEEEEEEECSSSCCEEE-------EEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred cccCeEEEEEEEcCCCceeEe-------EEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEe-CCEEcc
Confidence 567777877775433221100 001122345677666655 22 2338999999999999999985 778776
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
... ......+++|.|.++..+ |+|.|+|.|+|.+|...+..+.|.
T Consensus 143 ~~~-~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~s~~~~l~ 187 (192)
T 2iep_A 143 ENS-RIAVLESGSLRIHNVQKE------DAGQYRCVAKNSLGTAYSKLVKLE 187 (192)
T ss_dssp CCS-SEEECTTSCEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCC-cEEEecCCcEEEecCChh------hCEEEEEEEEcCCCcEEEEEEEEE
Confidence 443 335567789999888655 899999999999999865544444
No 49
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.53 E-value=6.5e-15 Score=110.08 Aligned_cols=83 Identities=11% Similarity=0.173 Sum_probs=60.4
Q ss_pred CCCEEEEcCCCCCccC--eEEEeeEecc-CCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEE
Q psy5697 45 HYPFRIKSAPGGNRTR--GLELTRQTRY-EPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 45 ~~P~~i~~p~~~~~~g--~~L~C~a~G~-P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y 119 (145)
.+|.|++.+......| +.|.|.+.|. |.|+|+|+ +||.++..... ....+| +|.|.++..+ |+|.|
T Consensus 116 ~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~-k~g~~l~~~~~--~~~~~~~~~L~I~~v~~~------D~G~Y 186 (207)
T 3rbs_A 116 QGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWY-KDEREISVDEK--HDFKDGICTLLITEFSKK------DAGIY 186 (207)
T ss_dssp TSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEE-ETTEEECCCCC--CCCSSEEEEEEETTCCGG------GCEEE
T ss_pred CCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEE-ECCEECCCCCc--eEcCCCEEEEEECCCCcc------cCEEE
Confidence 3788877663222233 8999999999 99999997 58888864322 222333 6999988765 89999
Q ss_pred EEEEEcCCCceE-EEEEE
Q psy5697 120 RCRASNEAGVIL-SRFVH 136 (145)
Q Consensus 120 ~C~A~N~~G~~~-s~~v~ 136 (145)
+|.|+|.+|... +..++
T Consensus 187 ~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 187 EVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp EEEEEETTEEEEEEEEEC
T ss_pred EEEEEcCCCEEEEEEEEe
Confidence 999999999984 33443
No 50
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.53 E-value=1.1e-13 Score=100.89 Aligned_cols=116 Identities=15% Similarity=0.238 Sum_probs=76.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCcc--CeEEEeeEeccCCCEEEEEccCCeEeec
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAY 87 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~ 87 (145)
..|++.|.|......... ........ .......|.+...+.. ... .+.|.|.+.|.| |.|+|++ ||..+..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~---~~~~~~l~-V~~~~~~p~i~~~~~~-~~~g~~v~l~C~~~~~p-p~i~W~~-~g~~l~~ 152 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRR---TQATVRFH-VHQPVTQPFLQVTNTT-VKELDSVTLTCLSNDIG-ANIQWLF-NSQSLQL 152 (208)
T ss_dssp GGGCEEEEEEEECSSCEE---EEEEEEEE-EECCCCCCEEEESCSS-CCTTCCEEEEEECSCTT-CEEEEEE-TTEECCC
T ss_pred ccCCeEEEEEEEcccCce---eEEEEEEE-eccCCCCCEEecCCce-EeeCCCEEEEEECCCCC-CceEEEE-CCEeCCC
Confidence 578888888775542111 11110000 1122334666665554 333 389999999966 8999985 8888764
Q ss_pred ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 88 VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 88 ~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.........+++|.|.++..+ |+|.|+|.|+|.+|+..|..++|.
T Consensus 153 ~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~s~~~~l~ 197 (208)
T 3r4d_A 153 TERMTLSQNNSILRIDPIKRE------DAGEYQCEISNPVSVRRSNSIKLD 197 (208)
T ss_dssp CSSEEEETTTTEEEESSCCGG------GCEEEEEEEECTTCCEECCCEEEC
T ss_pred CCCeEEcCCCCEEEEeccCHH------hCeEEEEEEecCCCcccCCceeee
Confidence 443333334578999988655 899999999999999988877666
No 51
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=1.4e-14 Score=103.20 Aligned_cols=70 Identities=10% Similarity=-0.009 Sum_probs=49.9
Q ss_pred eEEEeeEeccCCCEEEEEccCC----------------------------eEeecccCceEEeeCC---cEEEcCCCCCC
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNN----------------------------TVIAYVKDLRIALSNG---SLMFPPFPETG 109 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg----------------------------~~i~~~~~~~~~~~~G---sL~i~~~~~~~ 109 (145)
+.|.|.+.|+|.|+|+|++ +| ..+........+..++ +|.|.++..+
T Consensus 36 v~L~C~~~G~P~P~i~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~I~~v~~~- 113 (139)
T 1gxe_A 36 LRLDVPISGDPAPTVIWQK-AITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKE- 113 (139)
T ss_dssp CCCEEECCSBSCCEEEEEE-ECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEECSCCCTT-
T ss_pred EEEEEEEEEcCCCeEEEEE-CCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEEECCCCcc-
Confidence 8999999999999999986 44 3332112222333333 5999888765
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 110 FRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 110 ~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|+|.|+|+|+|.+|+. +..+.|.
T Consensus 114 -----DsG~Y~C~A~N~~G~~-~~~~~L~ 136 (139)
T 1gxe_A 114 -----DEGVYTVTVKNPVGED-QVNLTVK 136 (139)
T ss_dssp -----TCEEEEEEEECSSCEE-EEEEEEE
T ss_pred -----cCEEEEEEEEeCCceE-EEEEEEE
Confidence 8999999999999986 3444444
No 52
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=2e-14 Score=101.39 Aligned_cols=91 Identities=11% Similarity=0.095 Sum_probs=62.6
Q ss_pred CEEEEcCCC-CCccC--eEEEeeEecc---CCCEEEEEccCCe-EeecccCceEE----e------eCCcEEEcCCCCCC
Q psy5697 47 PFRIKSAPG-GNRTR--GLELTRQTRY---EPSQLGWRFSNNT-VIAYVKDLRIA----L------SNGSLMFPPFPETG 109 (145)
Q Consensus 47 P~~i~~p~~-~~~~g--~~L~C~a~G~---P~P~i~W~~~dg~-~i~~~~~~~~~----~------~~GsL~i~~~~~~~ 109 (145)
|.|++.|++ .+..| ++|+|.+.|. |.|+|+|+| ++. .+...++.+.. . .+.+|.|.++..+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~- 85 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK-GKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN- 85 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEE-SSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT-
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee-CcCcccCCCCCceEEEccccccccccceEEEEEccCCcc-
Confidence 678888877 23333 9999999885 899999986 421 11111111111 1 1468999998766
Q ss_pred CCCCCCCeEEEEEEEcCCCce-EEEEEEEEe-ccCCC
Q psy5697 110 FRPDVHSTVYRCRASNEAGVI-LSRFVHVKA-DSRIP 144 (145)
Q Consensus 110 ~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~-~~~~p 144 (145)
|+|.|+|.|+|..|.. .+..++|.. ++..|
T Consensus 86 -----DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p 117 (126)
T 2dav_A 86 -----FAGNYRCEVTYKDKFDSCSFDLEVHESTGTTP 117 (126)
T ss_dssp -----SCEEEEEEEECSSCEEEECCEEEEECCCCSCC
T ss_pred -----cCEEEEEEEEeCCCcEEEEEEEEEEecCCCCC
Confidence 8999999999999987 556888886 44444
No 53
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.52 E-value=1.1e-13 Score=99.59 Aligned_cols=109 Identities=15% Similarity=0.113 Sum_probs=71.1
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+......... ... ......+|.+...+.. ....| +.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 72 ~~d~G~Y~C~~~n~~~~~~~~~--~l~---v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~ 145 (194)
T 2a38_A 72 KANSGRYSLKATNGSGQATSTA--ELL---VKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYR-DGAEIQ 145 (194)
T ss_dssp GGGCEEEEEEEEETTEEEEEEE--EEE---EECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred cccCEEEEEEEEcCCceEeEEE--EEE---EccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEE-CCEECC
Confidence 5677788777644332221110 000 0112356777777765 22333 8999999999999999984 888876
Q ss_pred cccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 87 YVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 87 ~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
..........++ +|.|.++..+ |+|.|+|.|+|..|..
T Consensus 146 ~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~ 185 (194)
T 2a38_A 146 SSLDFQISQEGDLYSLLIAEAYPE------DSGTYSVNATNSVGRA 185 (194)
T ss_dssp CSSSEEEEEETTEEEEEEEEECGG------GCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEcCCEEEEEECCCChh------cCeEEEEEEEeCCCce
Confidence 544332322233 7999887655 8999999999999986
No 54
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.52 E-value=6e-15 Score=121.54 Aligned_cols=126 Identities=14% Similarity=0.088 Sum_probs=78.9
Q ss_pred cceeceeeeecCceeEeecccc------------CcccCCceeeeEEEecc------CCCCCCCEEEEcC-CC-CCcc--
Q psy5697 2 LNFHISTLLADADTYIIADRSL------------FPRPLGYLVGNIVYSSR------SENEHYPFRIKSA-PG-GNRT-- 59 (145)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~------------~p~~~~~~~~~~~~~~~------~~~~~~P~~i~~p-~~-~~~~-- 59 (145)
|+++-|.|.|||+..|...... .|..+ .|..+.... .-.+.+|.++... .+ .+..
T Consensus 325 L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~~---~g~~l~~~~~~~~~~~~~C~~P~i~~~~~~~~~v~~G~ 401 (477)
T 2id5_A 325 LILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFV---QGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGH 401 (477)
T ss_dssp EECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGGG---TTCBGGGSCSSCCTTSSCCEEEEESCCSCEEEEEETTC
T ss_pred EEccCCCccCccchHhHHhhhhccccCccCceeCCchHH---cCCchhhCccccccceeEeccccccccccccEEEeCCC
Confidence 4567789999999988765321 23322 122121111 1234455554433 22 2223
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeec--ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAY--VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVH 136 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~--~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~ 136 (145)
.+.|.|.|.|+|.|.|+|++ +|..+.. ..+......+|+|.|.++..+ |+|.|+|+|+|.+|.. .+..+.
T Consensus 402 ~v~l~C~~~g~P~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~~~~~l~ 474 (477)
T 2id5_A 402 TVQFVCRADGDPPPAILWLS-PRKHLVSAKSNGRLTVFPDGTLEVRYAQVQ------DNGTYLCIAANAGGNDSMPAHLH 474 (477)
T ss_dssp CEEECCCEEEESCCEEEEEC-TTSCBC-------CEECTTSCEEESSCCST------TCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEeccccCCCEEEEEE-CCccccccCCCceEEeCCCCEEEEeeCChH------HCEEEEEEEEeCCCcEEEEEEEE
Confidence 38999999999999999985 6655432 122234566889999988765 8999999999999997 333444
Q ss_pred E
Q psy5697 137 V 137 (145)
Q Consensus 137 v 137 (145)
|
T Consensus 475 V 475 (477)
T 2id5_A 475 V 475 (477)
T ss_dssp E
T ss_pred E
Confidence 4
No 55
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.51 E-value=8.9e-14 Score=100.72 Aligned_cols=111 Identities=17% Similarity=0.149 Sum_probs=73.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCC-EEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPS-QLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P-~i~W~~~dg~~i 85 (145)
..|++.|.|...+........ ........+|.+...|.+ .. +..+.|.|.+.|+|.| +|+|++ ||..+
T Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~-------~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~ 148 (195)
T 2c5d_C 77 LSDTGQYQCLVFLGHQTFVSQ-------PGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPL 148 (195)
T ss_dssp STTCEEEEEEEEETTEEEECC-------CEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBS
T ss_pred ccCCcEEEEEEEeCCCceecc-------cEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEec
Confidence 457777777765432111000 011223456888888776 22 2338999999999999 999985 77776
Q ss_pred ecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy5697 86 AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
...... ..+++|.|.++. |+|.|+|.|+|.+|...|+.+.|..
T Consensus 149 ~~~~~~---~~~~~L~i~~~~--------d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 149 ATAPGH---GPQRSLHVPGLN--------KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp SSSTTS---SCCEEEEECCCS--------SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCCCc---CCCCeEEEcccc--------cCceEEEEEEcCCCceEEEEEEEEE
Confidence 543221 456789997653 6899999999999998655555443
No 56
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=106.12 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=64.6
Q ss_pred CCCCEEEEcCCC--CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG--GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~--~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~ 116 (145)
..+|.++..++. ... ..+.|.|.+.|+|.|+|+|++ ||..+...........+| +|.|.++..+ |+
T Consensus 219 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~ 291 (317)
T 2y25_A 219 KNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALASDDHCNLKFEAGRTAYFTINGVSTA------DS 291 (317)
T ss_dssp TTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEE-SSSEECCCSSEEECCBTTTEEEEEEBSCCST------TC
T ss_pred CCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEE-CCEeCCCCCcEEEEEcCCCEEEEEECCCCHH------HC
Confidence 345667766554 222 338999999999999999985 777776544333333335 8999988765 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEec
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKAD 140 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~~ 140 (145)
|.|+|.|+|.+|.. .+..+.|..+
T Consensus 292 G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 292 GKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 99999999999997 4445666543
No 57
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.51 E-value=6.4e-14 Score=118.00 Aligned_cols=116 Identities=17% Similarity=0.184 Sum_probs=78.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+....... ........+|.|...|.. .. +..+.|.|.+.|+|+|+|+|+ +||..+.
T Consensus 356 ~~D~G~Y~C~a~N~~g~~~~--------~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~-k~g~~l~ 426 (570)
T 3b43_A 356 VEDSGDYTCEAHNAAGSASS--------STSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWH-KDKRELR 426 (570)
T ss_dssp GGGCEEEEEEEEBTTBCCEE--------EEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEE-ETTEECC
T ss_pred cccCEEEEEEEEeCCCEEEE--------EEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEE-ECCEECc
Confidence 45777888777554433211 112333467888877766 22 233899999999999999997 5888876
Q ss_pred cccCceEEeeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy5697 87 YVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKAD 140 (145)
Q Consensus 87 ~~~~~~~~~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~~ 140 (145)
..........+ ++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.|..+
T Consensus 427 ~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~A~N~~G~~~~~~~l~v~~~ 477 (570)
T 3b43_A 427 SGKKYKIMSENFLTSIHILNVDSA------DIGEYQCKASNDVGSDTCVGSITLKAP 477 (570)
T ss_dssp SSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEECCC
T ss_pred CCCCEEEEEcCCEEEEEECCCChh------hCEEEEEEEEECCCeEEEEEEEEeccC
Confidence 54433333333 37999888655 8999999999999997 3445665543
No 58
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.51 E-value=7.5e-14 Score=110.78 Aligned_cols=114 Identities=16% Similarity=0.242 Sum_probs=79.2
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+........ .......+|.++..|.+ .. +..+.|.|.+.|+|+|.|+|++ ||..+.
T Consensus 284 ~~d~G~Y~C~a~n~~g~~~~~--------~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~ 354 (404)
T 3p3y_A 284 EEDSGEYFCLASNKMGSIRHT--------ISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV-NGEPLQ 354 (404)
T ss_dssp GGGCEEEEEEEECSSCEEEEE--------EEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEE-TTEEGG
T ss_pred HhHCEEEEEEEEeCCCcEEEE--------EEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEE-CCEecC
Confidence 567778888776543332111 11222346788887776 22 3349999999999999999984 888876
Q ss_pred ccc-CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 87 YVK-DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 87 ~~~-~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
... .......+++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 355 ~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 355 SAPPNPNREVAGDTIIFRDTQIS------SRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp GSCCCTTEEEETTEEEESSCCSS------CCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCCceEEecCCEEEEeecCHH------HCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 433 2234556789999988765 8999999999999998 44455554
No 59
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.51 E-value=6.9e-14 Score=110.78 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=77.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+...... .........+|.++..+.+ .. +..+.|.|.+.|+|.|.|+|+ +||..+.
T Consensus 266 ~~d~G~Y~C~a~n~~g~~~--------~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~-~~g~~~~ 336 (382)
T 1cs6_A 266 FEDEGTYECEAENIKGRDT--------YQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWL-RDGQPLA 336 (382)
T ss_dssp GGGCEEEEEEEEETTEEEE--------EEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEE-ETTEECC
T ss_pred hhhCEEEEEEEEcCCCeEE--------EEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEE-ECCEECC
Confidence 4577778777755432221 1111222346777777766 22 233899999999999999997 4888876
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
... +....+++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.|.
T Consensus 337 ~~~--~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 337 SQN--RIEVSGGELRFSKLVLE------DSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp CCS--SEEEETTEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCc--eEEEECCEEEECcCCcc------cCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 432 34456889999988655 8999999999999998 44466654
No 60
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.51 E-value=1e-13 Score=105.49 Aligned_cols=113 Identities=16% Similarity=0.174 Sum_probs=72.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-C--CccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-G--NRTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~--~~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+....... ........+|.+...|.. . .+..+.|.|.+.|+|+|+|+|++ ||..+.
T Consensus 164 ~~d~G~Y~C~a~n~~g~~~~--------~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~ 234 (284)
T 2rik_A 164 VEDSGDYTCEAHNAAGSASS--------STSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK-DKRELR 234 (284)
T ss_dssp GGGCEEEEEEEECSSCEEEE--------EEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEE-TTEEEC
T ss_pred cccCEEEEEEEEcCCCceeE--------EEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEE-CCEECc
Confidence 45677777776543322211 111222345665555554 1 22338999999999999999974 888876
Q ss_pred cccCceEEeeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 87 YVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 87 ~~~~~~~~~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
..........+ ++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.|
T Consensus 235 ~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 235 SGKKYKIMSENFLTSIHILNVDSA------DIGEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp BTTTEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEEcCCEEEEEEcCCCcc------cCEEEEEEEEeCCCceeEEEEEEE
Confidence 54433333333 37889887654 8999999999999997 3334544
No 61
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.3e-14 Score=101.30 Aligned_cols=92 Identities=11% Similarity=0.046 Sum_probs=62.3
Q ss_pred CCCCCCCEEEEcCCC-CCccC--eEEEeeEecc---CCCEEEEEccCC-eEeecccCce-EE---e------eCCcEEEc
Q psy5697 41 SENEHYPFRIKSAPG-GNRTR--GLELTRQTRY---EPSQLGWRFSNN-TVIAYVKDLR-IA---L------SNGSLMFP 103 (145)
Q Consensus 41 ~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~---P~P~i~W~~~dg-~~i~~~~~~~-~~---~------~~GsL~i~ 103 (145)
...+..+.|++.|++ .+..| +.|.|.+.|. |.|+|+|+| ++ ..+...++.+ .+ . .+++|.|.
T Consensus 7 ~~~~~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 85 (118)
T 2edn_A 7 GAEEPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFK-GKWLELGSKSGARFSFKESHNSASNVYTVELHIG 85 (118)
T ss_dssp CCCCCSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEE-TTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEES
T ss_pred CccCCcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee-CCEeccCCCCccEEEeccccccccccceEEEEEe
Confidence 344556789999987 33333 9999999986 899999986 42 1221111111 11 1 24689999
Q ss_pred CCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 104 PFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 104 ~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
++..+ |+|.|+|.|+|..|.. .+..+.|..
T Consensus 86 ~v~~~------D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 86 KVVLG------DRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp SCCTT------TCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred eCChh------hCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 98766 8999999999999976 444555553
No 62
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=7.6e-14 Score=92.54 Aligned_cols=90 Identities=12% Similarity=0.082 Sum_probs=63.3
Q ss_pred CCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVH 115 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d 115 (145)
..+.+|.|+..|.+ .... .+.|.|.+.| |.|.|+|++ ||..+...... .+..+| +|.|.++..+ |
T Consensus 4 ~~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~~~~~~~~-~~~~~~~~~~L~I~~v~~~------D 74 (103)
T 2edf_A 4 GSSGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLK-DRKAIRKSQKY-DVVCEGTMAMLVIRGASLK------D 74 (103)
T ss_dssp SCCCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEE-SSCBCCCSSSE-EEEEETTEEEEEESSCCTT------T
T ss_pred CCCCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEE-CCEEccCCCCE-EEEECCCEEEEEECCCCcc------c
Confidence 34567888888877 2333 3899999998 999999974 77777544333 333344 6999888765 8
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccCC
Q psy5697 116 STVYRCRASNEAGVILSRFVHVKADSRI 143 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s~~v~v~~~~~~ 143 (145)
+|.|+|.|.| ...+..+.|...+.-
T Consensus 75 ~G~Y~C~a~n---~~~~~~l~V~~~p~~ 99 (103)
T 2edf_A 75 AGEYTCEVEA---SKSTASLHVEEKASG 99 (103)
T ss_dssp CSEEEEECSS---CEEEEEEEECCCSSS
T ss_pred CEEEEEEEcc---CCcEEEEEEeCCCCC
Confidence 9999999999 234445666544433
No 63
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=98.76 Aligned_cols=72 Identities=22% Similarity=0.257 Sum_probs=55.2
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.+.|.|.+.|+|.|.|+|+ +||..+...........+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|.
T Consensus 115 ~v~l~C~~~g~p~~~v~W~-~~g~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 115 EMTFSCRASGSPEPAISWF-RNGKLIEENEKYILKGSNTELTVRNIINS------DGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CEEEECEEEEESCCEEEEE-ETTEECCCSSSEEEETTTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cEEEEEEEccCCCCeEEEE-ECCEECcCCCcEEEecCCCEEEEcCCChh------hCeeEEEEEEeCCCceeEEEEEEEE
Confidence 3899999999999999998 48888765443333334568999887655 8999999999999987 34455443
No 64
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.49 E-value=1.2e-13 Score=116.39 Aligned_cols=113 Identities=18% Similarity=0.131 Sum_probs=76.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+.+.... .........+|.|+..+.+ ....| +.|.|.+.|.|+|+|+|++ ||..+.
T Consensus 449 ~~D~G~Y~C~A~N~~G~~~--------~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k-~~~~~~ 519 (570)
T 3b43_A 449 SADIGEYQCKASNDVGSDT--------CVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFK-DKGEIV 519 (570)
T ss_dssp GGGCEEEEEEEECSSCEEE--------EEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEE-TTEECC
T ss_pred hhhCEEEEEEEEECCCeEE--------EEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEe-CCeEec
Confidence 5677788887766544332 1112334568999998887 23333 8999999999999999985 665443
Q ss_pred cccCceEE-eeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 87 YVKDLRIA-LSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 87 ~~~~~~~~-~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
.......+ ..+ ++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.|
T Consensus 520 ~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~~a~L~V 568 (570)
T 3b43_A 520 RESDNIWISYSENIATLQFSRAEPA------NAGKYTCQIKNEAGTQECFATLSV 568 (570)
T ss_dssp CCTTTEEECCCSSEEEEEESSCCTT------CCEEEEEEEECSSCEEEEEEEECC
T ss_pred cCCCeEEEEECCCEEEEEECcCCHH------HCEEEEEEEEECCcEEEEEEEEEE
Confidence 22222222 222 38999887655 8999999999999998 4445544
No 65
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.49 E-value=1.5e-13 Score=90.27 Aligned_cols=68 Identities=19% Similarity=0.176 Sum_probs=50.9
Q ss_pred CeEEEeeEe-ccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 60 RGLELTRQT-RYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 60 g~~L~C~a~-G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
.+.|.|.+. |.|.|.|+|++.++... . ......+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|
T Consensus 27 ~v~l~C~~~~~~p~~~v~W~k~~~~~~---~-~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 27 DVTFICTAKSKSPAYTLVWTRLHNGKL---P-SRAMDFNGILTIRNVQPS------DAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp CEEEEEEEEESSSCCEEEEEEGGGBCC---C-TTEEEETTEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEeCCCCCC---C-ceeecCCCEEEEeCCChh------hCEEEEEEecCCCCccccEEEEEE
Confidence 389999998 79999999986432221 1 124456889999988765 8999999999999986 3334444
No 66
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.49 E-value=1.6e-14 Score=95.73 Aligned_cols=61 Identities=13% Similarity=0.251 Sum_probs=47.2
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
.+.|+|.+.| |.|.|+|+ +||+++...........++ +|.|.++..+ |+|.|+|.|.|..+
T Consensus 23 ~v~l~C~v~~-p~~~v~W~-k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~ 85 (91)
T 2lvc_A 23 CVMLACEVDR-EDAPVRWY-KDGQEVEESDFVVLENEGPHRRLVLPATQPS------DGGEFQCVAGDECA 85 (91)
T ss_dssp CEEEEEECSC-TTSCCEEE-ETTSCCCCCSSCEEEEETTEEEEEESSCCGG------GCSEEEEECSSCEE
T ss_pred cEEEEEEECC-CCcEEEEE-ECCEEeeeeeeeeEEecCCeEEEEeCCCChh------hcEEEEEEEcceEE
Confidence 3999999977 99999998 5888887655444444443 6999888665 89999999988643
No 67
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.48 E-value=4.9e-13 Score=103.69 Aligned_cols=86 Identities=14% Similarity=0.091 Sum_probs=61.6
Q ss_pred CCCCCCEEEEcCCC-C-Cc--cCeEEEeeEeccCCC-EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-G-NR--TRGLELTRQTRYEPS-QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~-~~--~g~~L~C~a~G~P~P-~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~ 116 (145)
....+|.+...+.. . .. ..+.|.|.+.|+|.| .|+|++ ||.++... ....+++|.|.++..+ |+
T Consensus 212 ~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~-~~~~l~~~----~~~~~~~L~i~~v~~~------d~ 280 (313)
T 4fqp_A 212 TVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWST-TMGPLPPF----AVAQGAQLLIRPVDKP------IN 280 (313)
T ss_dssp CBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEE-TTBSCCTT----EEEETTEEEECCCSSC------CE
T ss_pred ccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEE-CCEECCCc----eEEeCCEEEECcCChh------hC
Confidence 34557776544443 2 22 238999999999999 699985 67666421 3345779999988765 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEE
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|.|+|.|+|.+|+. .+..+.|.
T Consensus 281 G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 281 TTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCcEEEEEEEEEE
Confidence 99999999999987 34455555
No 68
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.47 E-value=2.4e-13 Score=107.78 Aligned_cols=111 Identities=17% Similarity=0.179 Sum_probs=77.1
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC--CCc--cCeEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG--GNR--TRGLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~--~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+........ ........+|.|...|.+ ... ..+.|.|.+.|+|.|+|+|+ +||..+
T Consensus 279 ~~d~G~Y~C~a~n~~g~~~~~-------~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~-~~g~~~ 350 (395)
T 1bih_A 279 PEDEGVYTCEVDNGVGKPQKH-------SLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWS-HNAKPL 350 (395)
T ss_dssp GGGCEEEEEEECCSSSSCEEE-------EEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEE-ETTEEC
T ss_pred hhhCEEEEEEEEeCCCCceEE-------EEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEE-ECCEEC
Confidence 567888888876654332210 111222356788887765 222 33999999999999999997 488887
Q ss_pred ecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE-EEEEEE
Q psy5697 86 AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHV 137 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~-s~~v~v 137 (145)
... +....+++|.|.++..+ |+|.|+|.|+|.+|... +..+.|
T Consensus 351 ~~~---~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 351 SGG---RATVTDSGLVIKGVKNG------DKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CSS---SEEEETTEEEESSCCST------TCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCC---ceEEECCEEEEeeCCcc------cCEEEEEEEEccCCCceEEEEEEE
Confidence 532 34456779999988765 89999999999999973 334443
No 69
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.3e-13 Score=91.58 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=60.7
Q ss_pred CCCCEEEEcCCC----CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG----GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVH 115 (145)
Q Consensus 44 ~~~P~~i~~p~~----~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d 115 (145)
..+|.++..|.. ....| +.|.|.+.|.|.| |+|+ +||..+...........++ +|.|.++..+ |
T Consensus 5 ~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~-k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D 76 (104)
T 2e6p_A 5 SSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWY-KDGQKVEESELLVVKMDGRKHRLILPEAKVQ------D 76 (104)
T ss_dssp CSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEE-ETTEECCCBTTBEEEEETTEEEEEESSCCTT------T
T ss_pred CCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEe-eCCEECCCCCCEEEEeCCCEEEEEECCCChh------h
Confidence 446666666665 22233 8999999999999 9998 5888876544333332332 6999888665 8
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEecc
Q psy5697 116 STVYRCRASNEAGVILSRFVHVKADS 141 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s~~v~v~~~~ 141 (145)
+|.|+|.|.|..|. ..+.|...+
T Consensus 77 ~G~Y~C~a~n~~~~---~~l~V~~~P 99 (104)
T 2e6p_A 77 SGEFECRTEGVSAF---FGVTVQDPS 99 (104)
T ss_dssp CEEEEEECSSCCCC---EEEEEECCC
T ss_pred CEEEEEEECCceEE---EEEEEcCCC
Confidence 99999999998663 456665443
No 70
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.47 E-value=1e-13 Score=110.11 Aligned_cols=113 Identities=16% Similarity=0.075 Sum_probs=76.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+...... .........+|.++..|.+ .. +..+.|.|.+.|+|.|+|+|+ +||..+.
T Consensus 284 ~~d~G~Y~C~a~n~~g~~~--------~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~-~~g~~~~ 354 (403)
T 3laf_A 284 DDDSGTYTCVVTYKNENIS--------ASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWM-KNGDVVI 354 (403)
T ss_dssp GGGCEEEEEEEEETTEEEE--------EEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEE-ETTEECC
T ss_pred HHHCEEEEEEEEcCCCceE--------EEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEE-ECCEECC
Confidence 4567777777644322211 1111222346788888776 22 233899999999999999997 4888775
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
... ......+++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.|.
T Consensus 355 ~~~-~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 355 PSD-YFQIVGGSNLRILGVVKS------DEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp CSS-SEEEETTTEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCC-cEEEecCccEEEeccccc------cCEEEEEEEEcCCceEEEEEEEEEe
Confidence 433 334456778999887655 8999999999999998 33345443
No 71
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.47 E-value=3e-13 Score=100.57 Aligned_cols=121 Identities=14% Similarity=0.125 Sum_probs=72.1
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcC-CC-CCc--cCeEEEeeEeccCCCEEEEEcc---CC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSA-PG-GNR--TRGLELTRQTRYEPSQLGWRFS---NN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p-~~-~~~--~g~~L~C~a~G~P~P~i~W~~~---dg 82 (145)
..|++.|.|...+.......... .........+|.+...+ .. ... ..+.|.|.+.|+|.|+|+|++. ||
T Consensus 81 ~~d~G~Y~C~~~~~~~~~~~~~~----l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g 156 (241)
T 3grw_A 81 PSDRGNYTCVVENKFGSIRQTYT----LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNG 156 (241)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE----EEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSS
T ss_pred cccCEEEEEEEeecCCceEEEEE----EEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCC
Confidence 56788888877553322211111 11111223345555543 33 222 3389999999999999999863 66
Q ss_pred eEeecccCceEE----------eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy5697 83 TVIAYVKDLRIA----------LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKAD 140 (145)
Q Consensus 83 ~~i~~~~~~~~~----------~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~~ 140 (145)
..+......... ..+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 157 SKVGPDGTPYVTVLKSWISESVEADVRLRLANVSER------DGGEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp CSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEC---
T ss_pred cccCCCCceeeeeeeEeeeeecCCceEEEECcCCcc------cCcEEEEEEecCcceEEEEEEEEecCC
Confidence 665432211110 13457999887655 8999999999999998 4445555533
No 72
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.47 E-value=7.8e-13 Score=98.07 Aligned_cols=116 Identities=14% Similarity=0.054 Sum_probs=77.2
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccC--------CCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRS--------ENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWR 78 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--------~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~ 78 (145)
..|++.|.|...+...........-.|..... ....+|.+...|.. .. +..+.|.|.+.|+|.|+|+|+
T Consensus 74 ~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~ 153 (218)
T 3k0w_A 74 VKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWF 153 (218)
T ss_dssp GGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEE
T ss_pred hhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEE
Confidence 67888999988654322111101011222110 12345788888776 22 333999999999999999998
Q ss_pred ccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy5697 79 FSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 79 ~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
+ ||..+... .+++|.|.++..+ |+|.|+|.|.|..|...+..+.|..
T Consensus 154 ~-~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s~~~~l~V 200 (218)
T 3k0w_A 154 K-NELPLTHE-------TKKLYMVPYVDLE------HQGTYWCHVYNDRDSQDSKKVEIII 200 (218)
T ss_dssp E-TTEECTTC-------CSSEEEESSCCGG------GCEEEEEEEECSSCEEECCCEEEEE
T ss_pred E-CCEECCCC-------CCCEEEEeecChh------cCEEEEEEEEcCCCCceeeeEEEEE
Confidence 5 77776432 2458999887655 8999999999999997777666653
No 73
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.47 E-value=3.4e-13 Score=96.46 Aligned_cols=107 Identities=20% Similarity=0.109 Sum_probs=71.9
Q ss_pred eecCceeEeeccccCcccC-CceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPL-GYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+...... ..+. .....+|.+...|.. .. +..+.|.|.+.|+|.| .|+|++ +|..
T Consensus 69 ~~d~G~Y~C~~~~~~~~~~~~~~~--------l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~ 139 (182)
T 1rhf_A 69 RSDAGRYWCQVEDGGETEISQPVW--------LTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTK 139 (182)
T ss_dssp GGGCEEEEEEESSCTTCEECCCEE--------EEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEE-TTEE
T ss_pred cccCeEEEEEEEcCCCcEEEEEEE--------EEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEc-CCeE
Confidence 5677788887765422111 0111 122346888887776 22 3338999999999999 999985 7777
Q ss_pred eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 85 IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 85 i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
+.... . .+++|.|.++ + |+|.|+|.|+|.+|...++.+.|.
T Consensus 140 ~~~~~---~--~~~~L~i~~~--~------d~G~Y~C~a~N~~g~~~s~~~~l~ 180 (182)
T 1rhf_A 140 IGGPA---P--SPSVLNVTGV--T------QSTMFSCEAHNLKGLASSRTATVH 180 (182)
T ss_dssp CSCSE---E--SSEEEEECCC--S------SCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCCCC---C--CceEEEEecc--c------cCeEEEEEEECCCCCcccceEEEE
Confidence 64321 1 5668898765 2 799999999999999865555443
No 74
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=4.2e-14 Score=92.97 Aligned_cols=83 Identities=13% Similarity=0.121 Sum_probs=61.9
Q ss_pred CCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 44 EHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
..+|.|...|.+ ....| +.|.|.+.|+|.|.|+|++ ||..+... .+++|.|.++..+ |+|.|+
T Consensus 8 ~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~ 73 (96)
T 2ens_A 8 LEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLPLP-------PSPVLILPEIGPQ------DQGTYS 73 (96)
T ss_dssp CCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEE-SSSBCSSC-------CCSEEEEESCCTT------TCEEEE
T ss_pred CCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEE-CCEECcCC-------CCCEEEECCCCcc------cCEEEE
Confidence 445777777766 23333 8999999999999999985 77665432 3568999888765 899999
Q ss_pred EEEEcCCCc-eEEEEEEEEec
Q psy5697 121 CRASNEAGV-ILSRFVHVKAD 140 (145)
Q Consensus 121 C~A~N~~G~-~~s~~v~v~~~ 140 (145)
|.|.|..|. ..+..+.|...
T Consensus 74 C~a~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 74 CVATHSSHGPQESRAVSISII 94 (96)
T ss_dssp CEECCSSCCCEECCCEEEEEC
T ss_pred EEEEeCCCCcEEEEEEEEEEe
Confidence 999997654 46666666644
No 75
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.47 E-value=5.6e-13 Score=99.40 Aligned_cols=119 Identities=11% Similarity=-0.023 Sum_probs=68.9
Q ss_pred eceee-eecCceeEeeccccCcccCCce-eeeEEEeccCCCCCCCEEEEcCC-C-CC--ccCeEEEeeEeccCCCEEEEE
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYL-VGNIVYSSRSENEHYPFRIKSAP-G-GN--RTRGLELTRQTRYEPSQLGWR 78 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~P~~i~~p~-~-~~--~~g~~L~C~a~G~P~P~i~W~ 78 (145)
+|..+ ..|++.|.|...+......-.. ... +.-.......+|.+...++ . .. +..+.|.|.+.|.|.|.|+|+
T Consensus 93 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~ 171 (250)
T 2fbo_J 93 RLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKS-VVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWY 171 (250)
T ss_dssp EECSCCGGGCEEEEEEEECTTCCSGGGEEEEE-EEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEE
T ss_pred EEeeCChhhCeEEEEEeccCccCCccccccee-EEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEE
Confidence 34443 6788999998865432211000 000 1000111122333333333 2 22 233999999999999999998
Q ss_pred ccCCeEeeccc-----------------------CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 79 FSNNTVIAYVK-----------------------DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 79 ~~dg~~i~~~~-----------------------~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
+ +|..+.... .......+++|.|.++..+ |+|.|+|.|+|.+|...
T Consensus 172 k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~g 240 (250)
T 2fbo_J 172 T-GPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKIT------DAGRVWCELATGQGELD 240 (250)
T ss_dssp E-EEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGG------GCEEEEEEEESSSSGGG
T ss_pred e-CCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcc------cCEEEEEEecCCccccC
Confidence 5 665543211 1111224479999988765 89999999999888763
No 76
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.46 E-value=3.5e-13 Score=89.00 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=61.4
Q ss_pred CCCCEEEEcCCC-CC--ccCeEEEeeEeccC--CCEEEEEccCCeEeecccCc--eEE-e-------eCCcEEEcCCCCC
Q psy5697 44 EHYPFRIKSAPG-GN--RTRGLELTRQTRYE--PSQLGWRFSNNTVIAYVKDL--RIA-L-------SNGSLMFPPFPET 108 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P--~P~i~W~~~dg~~i~~~~~~--~~~-~-------~~GsL~i~~~~~~ 108 (145)
..+|.|+..|.+ .. +..+.|.|.+.|.| .|.|+|++ +|..+...... ... . .+++|.|.++..+
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXX-DNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFT 86 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEE-TTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEcc-CCcccccccccceeeeeccCCCccccceEEEEeccccc
Confidence 457888888887 22 33399999999654 68999974 77766432100 011 1 1468999988665
Q ss_pred CCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 109 GFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|+|.|+|.|+|..|...+..+.|.
T Consensus 87 ------D~G~Y~C~a~n~~g~~~s~~~~l~ 110 (112)
T 3so5_A 87 ------SEGXYQCVISNHFGSSYSVXAXLT 110 (112)
T ss_dssp ------GCEEEEEEEEETTEEEECCCEEEE
T ss_pred ------cCCeEEEEEEeCCCcEEEeEEEEE
Confidence 899999999999999665555543
No 77
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.46 E-value=1.5e-13 Score=91.84 Aligned_cols=87 Identities=10% Similarity=0.009 Sum_probs=63.1
Q ss_pred CCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVH 115 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d 115 (145)
....+|.|++.|.+ ....| +.|.|.+.|.|.| |+|++ ||..+....+. .+..+| +|.|.++..+ |
T Consensus 4 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k-~g~~~~~~~~~-~~~~~~~~~~L~I~~v~~~------D 74 (106)
T 2dlt_A 4 GSSGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYK-NGVEVRPSKRI-TISHVGRFHKLVIDDVRPE------D 74 (106)
T ss_dssp SSCCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEE-SSCBCCCCSSC-EEEEETTEEEEEESSCCTT------T
T ss_pred CCCCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEc-CCEECcCCCCE-EEEEeCCEEEEEECCCCcC------C
Confidence 34567899998887 33333 9999999999988 99984 77777644433 333344 7999888765 8
Q ss_pred CeEEEEEEEcCCCceEEEEEEEE
Q psy5697 116 STVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
+|.|+|.|.|..++ .+..+.|.
T Consensus 75 ~G~Y~C~a~n~~~~-~~~~l~V~ 96 (106)
T 2dlt_A 75 EGDYTFVPDGYALS-LSAKLNFL 96 (106)
T ss_dssp CSCEEEEEETSCCC-CCBCEEEE
T ss_pred CEEEEEEEccCCce-EEEEEEEE
Confidence 99999999999332 34455555
No 78
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.45 E-value=1.6e-13 Score=99.18 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=52.2
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEe--eCCcEEEcC-CCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIAL--SNGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVILSRFVHV 137 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~--~~GsL~i~~-~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v 137 (145)
+.|.|.+.|+|.|+|+|++ +|..+.......... .+++|.|.+ +..+ |+|.|+|.|+|.+|.. +..+.|
T Consensus 122 ~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~------d~G~Y~C~a~N~~g~~-~~~~~l 193 (197)
T 2j8h_A 122 VSIKIPFSGKPDPVITWQK-GQDLIDNNGHYQVIVTRSFTSLVFPNGVERK------DAGFYVVCAKNRFGID-QKTVEL 193 (197)
T ss_dssp CEEEEEEEEESCCEEEEEE-SSCEECSSSSCEEEECSSEEEEECTTCCCGG------GCEEEEEEEEETTEEE-EEEEEE
T ss_pred EEEEEEEEecCCCcEEEEE-CCEEeecCCCEEEEEcCCceEEEEeCCCCcc------cCEeEEEEEEeCCCcE-eEEEEE
Confidence 8999999999999999985 777776443332222 234888887 7654 8999999999999996 344444
Q ss_pred E
Q psy5697 138 K 138 (145)
Q Consensus 138 ~ 138 (145)
.
T Consensus 194 ~ 194 (197)
T 2j8h_A 194 D 194 (197)
T ss_dssp E
T ss_pred E
Confidence 3
No 79
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.45 E-value=4.6e-13 Score=103.42 Aligned_cols=114 Identities=12% Similarity=0.089 Sum_probs=72.1
Q ss_pred eecCceeEeecc-ccCcccCC-ceeeeEEEeccCCCCCCCEEEEcCCC--CCccC--eEEEeeEeccCCCEEEEEccCCe
Q psy5697 10 LADADTYIIADR-SLFPRPLG-YLVGNIVYSSRSENEHYPFRIKSAPG--GNRTR--GLELTRQTRYEPSQLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~-~~~p~~~~-~~~~~~~~~~~~~~~~~P~~i~~p~~--~~~~g--~~L~C~a~G~P~P~i~W~~~dg~ 83 (145)
..|++.|.|... +....... ...-. +.........+|.++..+.+ ....| +.|.|.+.|+|.|.|+|++ ||.
T Consensus 171 ~~d~G~Y~C~a~~n~~g~~~~~~~~~~-~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~ 248 (315)
T 1itb_B 171 EKHRGNYTCHASYTYLGKQYPITRVIE-FITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-NGS 248 (315)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEE-EEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEE-TTE
T ss_pred ehhCcEEEEEEEcCCCCcEEEEEEEEE-EEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEE-CCE
Confidence 467778888775 33332210 00000 11111223567888766653 22333 8999999999999999985 888
Q ss_pred EeecccC----ceEEee----------CCcEEEcCCCCCCCCCCCC-CeEEEEEEEcCCCceE
Q psy5697 84 VIAYVKD----LRIALS----------NGSLMFPPFPETGFRPDVH-STVYRCRASNEAGVIL 131 (145)
Q Consensus 84 ~i~~~~~----~~~~~~----------~GsL~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G~~~ 131 (145)
.+..... .+.... .++|.|.++..+ | +|.|+|.|+|.+|...
T Consensus 249 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~~G~Y~C~a~N~~G~~~ 305 (315)
T 1itb_B 249 VIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESR------FYKHPFTCFAKNTHGIDA 305 (315)
T ss_dssp ECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGG------GGTSCEEEEEECTTCCEE
T ss_pred ECCcccccccccceeeeccCCCceeEEEEEEEEeecCHH------HcCCceEEEEecCCCcee
Confidence 8764331 111122 238999887655 8 9999999999999983
No 80
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=3.6e-13 Score=89.12 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=53.8
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAD 140 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~~~ 140 (145)
+.|.|.+.|.| |.|+|++ +|..+.... +....+++|.|.++..+ |+|.|+|.|.|..|.. +..+.|...
T Consensus 21 v~L~C~~~g~p-p~i~W~k-~g~~~~~~~--~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~-~~~~~l~V~ 89 (99)
T 2cr3_A 21 LQLRCRLRDDV-QSINWLR-DGVQLAESN--RTRITGEEVEVQDSVPA------DSGLYACVTSSPSGSD-TTYFSVNVS 89 (99)
T ss_dssp EEEECCCCSSC-CEEEEEE-SSSBCCCCS--SEEECSSEEEETTCCTT------TCEEEEEEEEETTEEE-EEEEEECBC
T ss_pred EEEEEEecCCC-CeEEEEE-CCEECCCCC--cEEEECCEEEEccCCHH------HCEEEEEEEEeCCceE-EEEEEEEEe
Confidence 89999999987 8999985 777765433 23334779999988765 8999999999999986 445555543
Q ss_pred cC
Q psy5697 141 SR 142 (145)
Q Consensus 141 ~~ 142 (145)
+.
T Consensus 90 ~~ 91 (99)
T 2cr3_A 90 DA 91 (99)
T ss_dssp SC
T ss_pred cC
Confidence 33
No 81
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.45 E-value=1.2e-12 Score=99.85 Aligned_cols=121 Identities=11% Similarity=0.016 Sum_probs=73.3
Q ss_pred eecCceeEeeccccCcccCC-ceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLG-YLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+-...... .+. +... . ..+|.+...|.. .. +..+.|.|.+.|+|.|.|+|++ ++...
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~---l~v~--~-~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~-~~~~~ 222 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYY---VYRL--Q-VSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTY-PRKES 222 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEE---EEEC--C-CCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEEC-TTSSS
T ss_pred eccCcEEEEEEEeCCceeeeeeEE---EEec--C-CCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEc-CCccC
Confidence 45778888877532211111 111 1111 1 145555555544 22 2339999999999999999984 44322
Q ss_pred eccc-CceEEe------eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEeccCC
Q psy5697 86 AYVK-DLRIAL------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKADSRI 143 (145)
Q Consensus 86 ~~~~-~~~~~~------~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~~~~~ 143 (145)
.... ...... ..++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|...+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 223 GRLVEPVTDFLLDMPYHIRSILHIPSAELE------DSGTYTCNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp SCCCCCEEEESCTTTTEEEEEEEESSCCSS------CCEEEEEEEEETTTTEEEEEEEEEEEEC--
T ss_pred CCcccccccccCCcceEEEEEEEEcccChh------hCcEEEEEeecCCCCceeEEEEEEEEEecC
Confidence 1111 111111 2358999988765 8999999999999998 6678888865543
No 82
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.45 E-value=1.7e-14 Score=98.81 Aligned_cols=83 Identities=14% Similarity=0.183 Sum_probs=59.2
Q ss_pred CCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCE-EEEEccCCeEeecc--cCceE--EeeCC----cEEEcCCCCC
Q psy5697 41 SENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQ-LGWRFSNNTVIAYV--KDLRI--ALSNG----SLMFPPFPET 108 (145)
Q Consensus 41 ~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~-i~W~~~dg~~i~~~--~~~~~--~~~~G----sL~i~~~~~~ 108 (145)
.....+|.|.. +.. ....| +.|.|.+.|+|+|. |+|++ +|..+... .+... ...++ +|.|.++..+
T Consensus 9 l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (122)
T 2cry_A 9 LTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSW-KENVLESGTSGRYTVETISTEEGVISTLTISNIVRA 86 (122)
T ss_dssp CCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEES-SSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred EEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEE-CCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh
Confidence 44566888877 555 33333 89999999999997 99985 67776532 22211 12233 7999887655
Q ss_pred CCCCCCCC-eEEEEEEEcCCCceE
Q psy5697 109 GFRPDVHS-TVYRCRASNEAGVIL 131 (145)
Q Consensus 109 ~~~~~~d~-G~Y~C~A~N~~G~~~ 131 (145)
|+ |.|+|.|+|.+|...
T Consensus 87 ------D~~G~Y~C~a~N~~G~~~ 104 (122)
T 2cry_A 87 ------DFQTIYNCTAWNSFGSDT 104 (122)
T ss_dssp ------HHHSCEEEEEECSSCEEE
T ss_pred ------hCCceEEEEEECCCCeEE
Confidence 78 999999999999973
No 83
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.44 E-value=8.8e-13 Score=95.20 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=64.7
Q ss_pred CCCCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCc-eEE-eeCC--cEEEcCCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDL-RIA-LSNG--SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~-~~~-~~~G--sL~i~~~~~~~~~~~~d~ 116 (145)
..+|.|+..|.+ ... ..+.|.|.+.|.|.|.|+|++ +|..+...... ... ..+| +|.|.++..+ |+
T Consensus 2 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~ 74 (197)
T 2j8h_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIADGLKYRIQEFKGGYHQLIIASVTDD------DA 74 (197)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCCCSSSEEEEEETTTEEEEEECSCCGG------GC
T ss_pred CCCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEE-CCEECccCCCcEEEEEcCCCEEEEEECcCCHH------hC
Confidence 357899888877 222 339999999999999999985 77777543222 222 2345 8999888765 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|+|.|.|..|.. .+..+.|..
T Consensus 75 G~Y~C~~~n~~g~~~~~~~l~V~~ 98 (197)
T 2j8h_A 75 TVYQVRATNQGGSVSGTASLEVEV 98 (197)
T ss_dssp SEEEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEEEEEEECCCceeEEEEEEEcC
Confidence 99999999999986 444555553
No 84
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.44 E-value=1e-12 Score=95.50 Aligned_cols=75 Identities=16% Similarity=0.248 Sum_probs=57.4
Q ss_pred CeEEEeeE-eccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEE--EEE
Q psy5697 60 RGLELTRQ-TRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR--FVH 136 (145)
Q Consensus 60 g~~L~C~a-~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~--~v~ 136 (145)
.+.|.|.+ .|+|.|.|+|+ +||..+.... .+....+++|.|.++..+ |+|.|+|.|+|.+|...+. .+.
T Consensus 128 ~~~l~C~~~~~~p~~~v~W~-~~~~~l~~~~-~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~~s~~~~l~ 199 (212)
T 2v9r_A 128 PAVMECQPPRGHPEPTISWK-KDGSPLDDKD-ERITIRGGKLMITYTRKS------DAGKYVCVGTNMVGERESEVAELT 199 (212)
T ss_dssp CEEEECBCCCEESCCEEEEE-ETTEEECTTS-TTEEEETTEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEE
T ss_pred cEEEEEecCCCCCCCEEEEE-ECCccCCCCc-ceEEccCCeEEEeeCCHh------hCeeEEEEEecccCceecceEEEE
Confidence 38999999 99999999998 4888876543 235556889999887655 8999999999999987553 556
Q ss_pred EEeccC
Q psy5697 137 VKADSR 142 (145)
Q Consensus 137 v~~~~~ 142 (145)
|...+.
T Consensus 200 V~~~P~ 205 (212)
T 2v9r_A 200 VLERPS 205 (212)
T ss_dssp EEC---
T ss_pred EEeCch
Confidence 554443
No 85
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.44 E-value=1.6e-12 Score=93.18 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=69.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccC-CCEEEEEc---cCC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYE-PSQLGWRF---SNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P-~P~i~W~~---~dg 82 (145)
..|++.|.|...+ ....... .....+|.+...+.. .. +..+.|.|.+.|+| .|+|+|++ .++
T Consensus 58 ~~d~G~Y~C~~~n---~~~~~~~--------l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~ 126 (184)
T 3b5h_A 58 DDQWGEYSCVFLP---EPMGTAN--------IQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSED 126 (184)
T ss_dssp GGCCEEEEEEEES---TTSCEEE--------EEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSC
T ss_pred hhhCeEEEEEEEC---CcCcEEE--------EEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCC
Confidence 4677888887765 1111111 112346666666644 12 23399999999999 89999986 344
Q ss_pred eEeeccc-CceEEeeCC---cEEEcCCC-CCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 83 TVIAYVK-DLRIALSNG---SLMFPPFP-ETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 83 ~~i~~~~-~~~~~~~~G---sL~i~~~~-~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
..+.... +...+..++ +|.|.++. .+ |+|.|+|.|+|.+|...+. +.|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~------d~G~Y~C~a~N~~g~~~~~-~~l~ 180 (184)
T 3b5h_A 127 KALMNGSESRFFVSSSQGRSELHIENLNMEA------DPGQYRCNGTSSKGSDQAI-ITLR 180 (184)
T ss_dssp EECCTTGGGTEEEEEETTEEEEEECSCCTTT------SSEEEEEEEEETTEEEEEE-EEEE
T ss_pred EEeecCCCCEEEEEecCCeeEEEEeeccccc------cCceEEEEEEeCCCcceEE-EEEE
Confidence 4443221 222333333 79998876 55 8999999999999997433 4443
No 86
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.43 E-value=5.1e-13 Score=98.13 Aligned_cols=124 Identities=12% Similarity=0.087 Sum_probs=73.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEc-CCC-CC--ccCeEEEeeEeccCCCEEEEEcc---CC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKS-APG-GN--RTRGLELTRQTRYEPSQLGWRFS---NN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~-p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~---dg 82 (145)
..|++.|.|...+.......... .. .......+|.++.. |.. .. +..+.|.|.+.|+|.|.|+|++. ||
T Consensus 85 ~~d~G~Y~C~~~n~~~~~~~~~~--l~--V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g 160 (231)
T 3ojm_B 85 PSDKGNYTCVVENEYGSINHTYH--LD--VVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNG 160 (231)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE--EE--EECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTT
T ss_pred cccCEEEEEEEecccCcccccEE--EE--EEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCC
Confidence 67888888887554332211111 11 11112234544433 232 12 23389999999999999999862 66
Q ss_pred eEeecccCce--E-------EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEeccCC
Q psy5697 83 TVIAYVKDLR--I-------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKADSRI 143 (145)
Q Consensus 83 ~~i~~~~~~~--~-------~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~~~~~ 143 (145)
..+....... . ...+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 161 SKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEA------DAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp BSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred ccccCCCcceEeEecccccccCCccEEEEecCCHH------HCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 6654322111 1 112357999887655 8999999999999998 4446666654443
No 87
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.43 E-value=1.6e-12 Score=99.02 Aligned_cols=71 Identities=23% Similarity=0.259 Sum_probs=54.9
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+.|.|.+.|+|.|.|+|+ +||..+...........+++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 212 ~~l~C~~~g~p~p~v~W~-~~g~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~~~~l~v~ 283 (291)
T 2wim_A 212 MTFSCRASGSPEPAISWF-RNGKLIEENEKYILKGSNTELTVRNIINS------DGGPYVCRATNKAGEDEKQAFLQVF 283 (291)
T ss_dssp EEEECBCCCBSCCEEEEE-ETTEECCCTTTEEECSTTCEEEEESCCST------TCEEEEEEEEETTEEEEEEEEEEC-
T ss_pred EEEEEEeecCCCCeEEEE-ECCEECcCCccEEEcCCccEEEEeeCCcc------cCEEEEEEEEECCCceeeeEEEEEE
Confidence 899999999999999997 58888765443222234568999988655 8999999999999998 44455554
No 88
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.43 E-value=7.4e-13 Score=97.48 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=63.8
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEee--C-CcEEEcCCC-CCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALS--N-GSLMFPPFP-ETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~--~-GsL~i~~~~-~~~~~~~~d~ 116 (145)
..+|.|+..|.+ .... .+.|.|.+.|.|.|.|+|++ ||..+........... + .+|.|.++. .+ |+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~------d~ 76 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNK-KGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPR------DE 76 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCTTEEEEEEGGGTEEEEEECSCCTTT------TC
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEE-CCcCCCCCceeEEEEcCCCceEEEEeccCCCC------CC
Confidence 467899988887 2233 39999999999999999974 7777754321112222 2 269998873 44 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|+|.|.|..|.. .+..+.|..
T Consensus 77 G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (212)
T 2yd6_A 77 AIYECVASNNVGEISVSTRLTVLR 100 (212)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEEEEEcCCCcEEEEEEEEEec
Confidence 99999999999986 344566654
No 89
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.43 E-value=5.8e-13 Score=98.25 Aligned_cols=91 Identities=14% Similarity=0.110 Sum_probs=62.9
Q ss_pred CCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCce-EEe---eCCcEEEcCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLR-IAL---SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~-~~~---~~GsL~i~~~~~~~~~~~~d 115 (145)
...+|.| ..|.+ .. +..+.|.|.+.|+|.|.|+|++ ||..+......+ .+. .+++|.|.++..+ |
T Consensus 16 ~~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~------d 87 (215)
T 3mtr_A 16 HMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFR-DGQLLPSSNYSNIKIYNTPSASYLEVTPDSEN------D 87 (215)
T ss_dssp CCEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEE-TTEESSCSSSCSEEEEEETTEEEEEECCCSGG------G
T ss_pred eecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEE-CCeECCCCCCccEEEecCCCeeEEEEecCChh------h
Confidence 3456777 45655 22 2339999999999999999974 888876432112 222 2358999888655 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEecc
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKADS 141 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~~~ 141 (145)
+|.|+|.|.|..|.. .+..+.|...+
T Consensus 88 ~G~Y~C~a~n~~g~~~~~~~l~v~~~P 114 (215)
T 3mtr_A 88 FGNYNCTAVNRIGQESLEFILVQADTP 114 (215)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECCCC
T ss_pred CeEEEEEEEECCCceEEEEEEEECCCC
Confidence 999999999999987 33344444333
No 90
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.42 E-value=6e-13 Score=105.37 Aligned_cols=104 Identities=12% Similarity=0.077 Sum_probs=70.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+......... ......+|.+...|.+ .. +..+.|.|.+.|+|+|+|+|+ +||..+.
T Consensus 279 ~~d~G~Y~C~a~n~~g~~~~~~--------~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~-~~g~~i~ 349 (388)
T 2v5m_A 279 VEDSGKYLCVVNNSVGGESVET--------VLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWM-KDGKAIG 349 (388)
T ss_dssp GGGCEEEEEEEECSSCEEEEEE--------EEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEE-ETTEECS
T ss_pred HHHCeEEEEEEecCCCceeEEE--------EEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEE-ECCEECc
Confidence 4577788887765443321111 1122235666666654 22 233999999999999999997 4887764
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVH 136 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~ 136 (145)
. .+++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.
T Consensus 350 ~--------~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~ 386 (388)
T 2v5m_A 350 H--------SESVLRIESVKKE------DKGMYQCFVRNDRESAEASAELK 386 (388)
T ss_dssp C--------CSSEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEE
T ss_pred c--------CCCEEEEecCChh------hCEEEEEEEEcCCCcEEEEEEEE
Confidence 2 2568999887655 8999999999999987 333443
No 91
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.42 E-value=3.4e-12 Score=91.58 Aligned_cols=107 Identities=11% Similarity=0.006 Sum_probs=70.1
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC--ccCeEEEeeEeccCCC-EEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN--RTRGLELTRQTRYEPS-QLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a~G~P~P-~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+..... .+. ..+. .+|.++..+.... +..+.|.|.+.|.|++ +|+|++ ||..+.
T Consensus 63 ~~d~G~Y~C~~~n~~~s~--~~~--l~V~------~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k-~g~~~~ 131 (175)
T 1fnl_A 63 VNDSGEYRCQTNLSTLSD--PVQ--LEVH------IGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKDRK 131 (175)
T ss_dssp GGGCEEEEEECSSSCCCC--CEE--EEEE------CSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEE-TTEEEE
T ss_pred cccCEEEEEEeeCCcccc--cEE--EEEe------CCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEE-CCeEcc
Confidence 567788888775522111 111 1111 2344555444322 2338999999988765 999984 787763
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
. ...+++|.|.++..+ |+|.|+|.|.|..|...+..+.|..
T Consensus 132 ~------~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~s~~~~l~V 172 (175)
T 1fnl_A 132 Y------FHHNSDFHIPKATLK------DSGSYFCRGLVGSKNVSSETVNITI 172 (175)
T ss_dssp E------EEECCCEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred C------CCCCCEEEEcccChh------hCeEEEEEEEcCCCCccCccEEEEE
Confidence 2 234679999888665 8999999999998877666666553
No 92
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.42 E-value=1.1e-12 Score=99.95 Aligned_cols=71 Identities=17% Similarity=0.289 Sum_probs=52.6
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeeccc---CceEEee-CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVK---DLRIALS-NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFV 135 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~---~~~~~~~-~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v 135 (145)
.+.|.|.+.|+|.|+|+|+ +||..+.... ....... +++|.|.++..+ |+|.|+|.|+|.+|.. +..+
T Consensus 213 ~v~l~C~~~g~p~p~i~W~-~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~-~~~~ 284 (291)
T 1qz1_A 213 SVTLVCDADGFPEPTMSWT-KDGEPIENEEEDDEKHIFSDDSSELTIRNVDKN------DEAEYVCIAENKAGEQ-DASI 284 (291)
T ss_dssp CEEEEEEEEEESCCEEEEE-ETTEECCCC--CCSSEEECTTSCEEEECSCCGG------GCEEEEEEEEETTEEE-EEEE
T ss_pred eEEEEEEEEEeCCCcEEEE-ECCEECcCCCCCCcceEEcCCCcEEEEEecChh------cCEEEEEEEEeCCCce-EEEE
Confidence 3899999999999999998 4888776432 1222323 347999888655 8999999999999986 3444
Q ss_pred EEE
Q psy5697 136 HVK 138 (145)
Q Consensus 136 ~v~ 138 (145)
.|.
T Consensus 285 ~l~ 287 (291)
T 1qz1_A 285 HLK 287 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 93
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.42 E-value=1.2e-12 Score=93.97 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=66.3
Q ss_pred CCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~ 116 (145)
...+|.|+..|.+ ....| +.|.|.+.|.|.|.++|++ +|..+...... ....++ +|.|.++..+ |+
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~------d~ 75 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQSRKY-KMSSDGRTHTLTVMTEEQE------DE 75 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECCCSSE-EEEESSSEEEEEEECCSGG------GC
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCCCccE-EEEeCCCEEEEEEecCCcc------CC
Confidence 3567888888877 22333 9999999999999999985 77777544332 333444 7999888655 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|+|.|.|..|.. .+..+.|..
T Consensus 76 G~Y~C~~~n~~~~~~~~~~l~v~~ 99 (197)
T 3lcy_A 76 GVYTCIATNEVGEVETSSKLLLQA 99 (197)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEE
T ss_pred EEEEEEEECCCCceeEEEEEEEEc
Confidence 99999999999987 444666653
No 94
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.42 E-value=2.5e-12 Score=94.43 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=64.2
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEE--eeCC--cEEEcCCCC-CCCCCCCC
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIA--LSNG--SLMFPPFPE-TGFRPDVH 115 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~--~~~G--sL~i~~~~~-~~~~~~~d 115 (145)
..+|.|+..|.+ .... .+.|.|.+.|.|.|.|+|++ ||..+......... ..+| +|.|.++.. + |
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~------d 76 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVSGTQSRYTVLEQPGGISILRIEPVRAGR------D 76 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCTTSTTEEEEEETTTEEEEEESSCCTTT------T
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEE-CCEECCCCcceeEEEEcCCCeEEEEEEecCCCC------c
Confidence 468999999887 2233 39999999999999999985 88887532222222 2344 799988765 4 8
Q ss_pred CeEEEEEEEcCCCceEEE--EEEEEe
Q psy5697 116 STVYRCRASNEAGVILSR--FVHVKA 139 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s~--~v~v~~ 139 (145)
+|.|+|.|.|..|...+. .+.|..
T Consensus 77 ~G~Y~C~~~n~~g~~~~~~~~l~V~~ 102 (212)
T 2yd1_A 77 DAPYECVAENGVGDAVSADATLTIYE 102 (212)
T ss_dssp CSEEEEEEECSSSCEEEEEEEEEEEC
T ss_pred CceEEEEEEeCCCCeEEeeEEEEEec
Confidence 999999999999995444 444443
No 95
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=5.8e-13 Score=88.49 Aligned_cols=84 Identities=12% Similarity=0.039 Sum_probs=57.6
Q ss_pred CCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccC--ceEEeeC--CcEEEcCCCCCCCCCCCCCeE
Q psy5697 46 YPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKD--LRIALSN--GSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~--~~~~~~~--GsL~i~~~~~~~~~~~~d~G~ 118 (145)
|+.|++.|.+ ....| +.|.|.+.| |+|.|+|+ +||..+..... ......+ .+|.|.++..+ |+|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~-k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~ 78 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWF-KNGEEIIPGPKSRYRIRVEGKKHILIIEGATKA------DAAE 78 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEE-ETTEECCCSTTCSEEEEEETTEEEEEEEEECTT------TCSE
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEE-ECCEECCCCCceEEEEEEcCCEEEEEECCCCcc------cCEE
Confidence 3446666666 23334 899999999 88999998 48888765432 2233222 37999888765 8999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy5697 119 YRCRASNEAGVILSRFVHVKAD 140 (145)
Q Consensus 119 Y~C~A~N~~G~~~s~~v~v~~~ 140 (145)
|+|.|.| ...+..+.|...
T Consensus 79 Y~C~a~n---~~~~~~l~V~~~ 97 (103)
T 1x44_A 79 YSVMTTG---GQSSAKLSVDLK 97 (103)
T ss_dssp EEEEETT---EEEEEEEEEECC
T ss_pred EEEEECC---CcEEEEEEEeCC
Confidence 9999999 234456666643
No 96
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.42 E-value=1.3e-12 Score=100.83 Aligned_cols=90 Identities=19% Similarity=0.264 Sum_probs=60.7
Q ss_pred CCCCEEEEcCCCC-Ccc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCC-CCCCCCCCC
Q psy5697 44 EHYPFRIKSAPGG-NRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPE-TGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~~-~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~-~~~~~~~d~ 116 (145)
..+|.|+..|.+. ... .+.|.|.+.|+|.|+|+|+ +||..+...........+| +|.|.++.. + |+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~-k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~------D~ 76 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWN-KKGKKVNSQRFETIEFDESAGAVLRIQPLRTPR------DE 76 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC--------CTTEEEEEETTTTEEEEEECSCCTTT------TC
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEE-ECCEECCCCceEEEEecCCCceEEEEecccccC------CC
Confidence 5689999999872 233 3999999999999999997 5777775332111222443 699988764 4 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEec
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKAD 140 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~~ 140 (145)
|.|+|.|.|..|.. .+..+.|...
T Consensus 77 G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (304)
T 2yd9_A 77 NVYECVAQNSVGEITVHAKLTVLRE 101 (304)
T ss_dssp SEEEEEEECSSCEECCEEEEEEECG
T ss_pred eEEEEEEECCCCeEEEEEEEEEecc
Confidence 99999999999986 4556666543
No 97
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.42 E-value=7.4e-13 Score=86.61 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=52.6
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.+.|.|.+.| .|.|+|+ +||..+.... +....+++|.|.++..+ |+|.|+|.|.|..|.. .+..+.|.
T Consensus 18 ~~~l~C~~~~--~p~v~W~-k~g~~~~~~~--~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~ 86 (95)
T 4hwu_A 18 SLELQCMLKD--AAVISWT-KDGVHLGPNN--RTVLIGEYLQIKGATPR------DSGLYACTAARTVDSETWIFMVNVT 86 (95)
T ss_dssp CEEEECCCCT--TCEEEEE-ETTEEECCCS--SEEEETTEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEEEeCC--CCEEEEE-ECCEECCCCc--eEEEeCCEEEECcCCcc------cCEEEEEEEccCCCcEEEEEEEEEe
Confidence 3999999998 5899998 5888875432 34456789999988765 8999999999999976 33355554
No 98
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.41 E-value=4.6e-13 Score=98.27 Aligned_cols=72 Identities=15% Similarity=0.205 Sum_probs=55.3
Q ss_pred CeEEEeeE-eccCCCEEEEEccCCeEeecc-------cCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 60 RGLELTRQ-TRYEPSQLGWRFSNNTVIAYV-------KDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 60 g~~L~C~a-~G~P~P~i~W~~~dg~~i~~~-------~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
.+.|.|.+ .|.|.|+|+|++ +|..+... ........+++|.|.++..+ |+|.|+|.|+|.+|...
T Consensus 125 ~v~l~C~~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~ 197 (217)
T 2vr9_A 125 TALLECGPPKGIPEPTLIWIK-DGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPI------DEGNYKCIAQNLVGTRE 197 (217)
T ss_dssp CEEECCBCCCEESCCEEEEEE-TTEEECCCCCC---CCCSEEEETTTEEEESSCCST------TCEEEEEEEEETTEEEE
T ss_pred eEEEEEECCCCCCCCeEEEEE-CCcCCCcccccccccCCcEEecCCCcEEEeeCCHH------HCeEEEEEEEcccceec
Confidence 38999999 999999999985 78877621 12234456789999988665 89999999999999986
Q ss_pred EEEEEEE
Q psy5697 132 SRFVHVK 138 (145)
Q Consensus 132 s~~v~v~ 138 (145)
+..+.+.
T Consensus 198 ~~~~~lv 204 (217)
T 2vr9_A 198 SSYAKLI 204 (217)
T ss_dssp CCCEEEE
T ss_pred cccEEEE
Confidence 5544333
No 99
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.41 E-value=2e-12 Score=98.88 Aligned_cols=118 Identities=13% Similarity=-0.033 Sum_probs=73.1
Q ss_pred eecCc-eeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCE-EEEEccCCeE
Q psy5697 10 LADAD-TYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQ-LGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~-i~W~~~dg~~ 84 (145)
..|++ .|.|...+......+. ............+|.+...|.+ ....| +.|.|.+.|.|.|. |+|++ +|..
T Consensus 154 ~~d~G~~Y~C~a~n~~~~~~s~---~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~-~~~~ 229 (290)
T 2o26_X 154 RAYHRLCVRCAAQRDGTWLHSD---KFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLK-MNPQ 229 (290)
T ss_dssp GGGTTCEEEEEEEETTEEEECC---CEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEE-ESSS
T ss_pred HHHCCCEEEEEEEECCceEEeE---EEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEec-CCCC
Confidence 56777 8888775532211110 0011111123467888777765 23333 89999999999997 99986 5544
Q ss_pred e----ecccCce-----EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 85 I----AYVKDLR-----IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 85 i----~~~~~~~-----~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
+ ....... .....++|.|.++..+ |+|.|+|.|+|.+|.. +..+.|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~N~~g~~-~~~~~l~ 285 (290)
T 2o26_X 230 PQHIAQVKHNSWHRGDFNYERQETLTISSARVD------DSGVFMCYANNTFGSA-NVTTTLK 285 (290)
T ss_dssp EEECCCEECCEEEEETTEEEEEEEEEESSCCSS------SCEEEEEEEECSSCEE-EEEEEEC
T ss_pred CccceeecccccccCceeeEEEEEEEEcCCCcc------cCeEEEEEEeCCCCcE-EEEEEEE
Confidence 2 2111111 2234568999888655 8999999999999998 3444443
No 100
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.41 E-value=4.8e-12 Score=90.74 Aligned_cols=71 Identities=14% Similarity=0.219 Sum_probs=52.1
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeC--CcEEEcCCCC-CCCCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSN--GSLMFPPFPE-TGFRPDVHSTVYRCRASNEAGVILSRFVH 136 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~--GsL~i~~~~~-~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~ 136 (145)
.+.|.|.+.|+|.|+|+|++ ||..+............ ++|.|.++.. + |+|.|+|.|+|.+|.. +..+.
T Consensus 120 ~~~l~C~~~~~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~------d~G~Y~C~a~n~~g~~-~~~~~ 191 (197)
T 3lcy_A 120 TLRLHVMYIGRPVPAMTWFH-GQKLLQNSENITIENTEHYTHLVMKNVQRKT------HAGKYKVQLSNVFGTV-DAILD 191 (197)
T ss_dssp CEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEECSSEEEEEESSCCHHH------HCEEEEEEEECSSCEE-EEEEE
T ss_pred eEEEEEEEeeeeCCeeEEeE-CCEECCCCCceEEEEcCCEEEEEEccccchh------hCceEEEEEEcCcCce-EEEEE
Confidence 38999999999999999984 78887654333222222 4799987752 3 7999999999999997 33444
Q ss_pred EE
Q psy5697 137 VK 138 (145)
Q Consensus 137 v~ 138 (145)
|.
T Consensus 192 l~ 193 (197)
T 3lcy_A 192 VE 193 (197)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 101
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.41 E-value=8e-13 Score=95.84 Aligned_cols=69 Identities=12% Similarity=0.133 Sum_probs=50.6
Q ss_pred CeEEEeeE-eccCCCEEEEEccC-CeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy5697 60 RGLELTRQ-TRYEPSQLGWRFSN-NTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHV 137 (145)
Q Consensus 60 g~~L~C~a-~G~P~P~i~W~~~d-g~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v 137 (145)
.+.|.|.+ .|.|.|.|+|++.+ +..+... ......+++|.|.++..+ |+|.|+|.|+|.+|.. +..+.|
T Consensus 138 ~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~-~~~~~l 208 (214)
T 3jz7_A 138 DFKLKCEPKEGSLPLQFEWQKLSDSQTMPTP--WLAEMTSPVISVKNASSE------YSGTYSCTVQNRVGSD-QCMLRL 208 (214)
T ss_dssp CEEEEEECSBCCSSCEEEEEECSTTCCCCGG--GGGGTTSSEEEECSCCGG------GCEEEEEEEECSSCEE-EEEEEE
T ss_pred cEEEEecCCCCCCCCEEEEEECCCCCccCcc--ceeccCCCEEEEecCCHH------HCEEEEEEEEcCCCcE-EEEEEE
Confidence 39999999 99999999998642 2333221 122345679999988765 8999999999999998 333433
No 102
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.41 E-value=2.6e-12 Score=102.04 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=79.0
Q ss_pred eecCceeEeeccccCcccC-CceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPL-GYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+...... ....-. +. .......++.++..|.+ .. +..+.|.|.+.|+|+|.|+|++ +|..+
T Consensus 186 ~~d~G~Y~C~~~n~~~~~~~~~~~l~-v~-~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~-~~~~~ 262 (403)
T 3laf_A 186 PGDSGVYRCSARNPASTRTGNEAEVR-IL-SDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLR-GEEVI 262 (403)
T ss_dssp GGGCEEEEEEEECSSCCCBCCCEEEE-EE-CCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEEC
T ss_pred cccCEEEEEEEEcCCCceeccceeEE-Ee-cCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEE-CCeec
Confidence 5678888888765432211 111111 11 11222233456666665 22 3349999999999999999985 77777
Q ss_pred ecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 86 AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
...........+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|..
T Consensus 263 ~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~ 311 (403)
T 3laf_A 263 QLRSKKYSLLGGSNLLISNVTDD------DSGTYTCVVTYKNENISASAELTVLV 311 (403)
T ss_dssp CCSSSSEEEETTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred cCCCceEEECCccEEEEeCCCHH------HCEEEEEEEEcCCCceEEEEEEEEEC
Confidence 64443445556779999888655 8999999999999987 444666653
No 103
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.6e-13 Score=90.93 Aligned_cols=86 Identities=10% Similarity=0.037 Sum_probs=59.3
Q ss_pred CCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccC---ceEEeeCC---cEEEcCCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKD---LRIALSNG---SLMFPPFPETGFRP 112 (145)
Q Consensus 42 ~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~---~~~~~~~G---sL~i~~~~~~~~~~ 112 (145)
..+.+|.|++.|.+ .... .+.|.|.+.|.| |.|+|++ ||..+..... ...+..+| +|.|.++..+
T Consensus 4 v~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k-~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~---- 77 (101)
T 2edk_A 4 GSSGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMK-NGVELTREDSFKARYRFKKDGKRHILIFSDVVQE---- 77 (101)
T ss_dssp SCCCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEE-SSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGG----
T ss_pred cccCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEE-CCEECCCCCCcceeEEEEECCCEEEEEECCCChh----
Confidence 34567888888877 2233 389999999999 9999984 7877764431 11333344 5899887655
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 113 DVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|+|.|+|.|.|.. .+..+.|.
T Consensus 78 --D~G~Y~C~a~n~~---~~~~l~V~ 98 (101)
T 2edk_A 78 --DRGRYQVITNGGQ---CEAELIVE 98 (101)
T ss_dssp --GCSBEEEECSSCE---ECCBEEEE
T ss_pred --hCEEEEEEEcCCc---EEEEEEEe
Confidence 8999999999832 23345554
No 104
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.40 E-value=1.8e-12 Score=98.57 Aligned_cols=117 Identities=12% Similarity=0.027 Sum_probs=73.3
Q ss_pred eecCceeEeecc-ccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCC-C--ccCeEEEeeEec-cCCCEEEEEccCCeE
Q psy5697 10 LADADTYIIADR-SLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGG-N--RTRGLELTRQTR-YEPSQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~-~--~~g~~L~C~a~G-~P~P~i~W~~~dg~~ 84 (145)
..|++.|.|... .........+. .........+|.+...|... . +..+.|.|.+.| .|.|.|+|++ +|..
T Consensus 153 ~~d~G~Y~C~a~~~~~~~~~~~~~----l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~ 227 (289)
T 3ejj_X 153 VLDSNTYVCKTMVNGRESTSTGIW----LKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKR-GDTK 227 (289)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEE----EEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEE-TTEE
T ss_pred cccCEEEEEEEEeCCCccccccEE----EEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEE-CCEE
Confidence 567778888765 22111111111 11111223578888887762 2 333999999999 8999999985 7777
Q ss_pred eecccC----ceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 85 IAYVKD----LRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 85 i~~~~~----~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
+..... ......+++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~s~~L~~ 279 (289)
T 3ejj_X 228 LEIPLNSDFQDNYYKKVRALSLNAVDFQ------DAGIYSCVASNDVGTRTATMNFQV 279 (289)
T ss_dssp CCCCEEEEECSSSEEEEEEEEESSCCSS------SCEEEEEEEECSSCEEEEEEEEEC
T ss_pred eeccCCcccccceEEeeEEEEEEeeccc------CCEEEEEEEEcCCCCccccEEEEE
Confidence 643211 011223568999888765 8999999999999997 3334433
No 105
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=3e-13 Score=90.84 Aligned_cols=89 Identities=6% Similarity=-0.102 Sum_probs=61.7
Q ss_pred CCCCEEEEcCCC-CCcc--CeEEEeeEeccCC-CEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCe
Q psy5697 44 EHYPFRIKSAPG-GNRT--RGLELTRQTRYEP-SQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~-P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G 117 (145)
..+|.|++.+.+ .... .+.|.|.+.|.|. |.++|+ +||..+....+......++ +|.|.++..+ |+|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~-k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~------D~G 78 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWT-VGGKTVGSSSRFQATRQGRKYILVVREAAPS------DAG 78 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCB-SSSSBCSBCSSCEEEEETTEEEEEECSCCTT------TCS
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEE-ECCEECCCCCCEEEEEcCCEEEEEECCCCHH------HCE
Confidence 445677777776 2233 3999999999985 489997 5888876544333333222 7999988765 899
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccC
Q psy5697 118 VYRCRASNEAGVILSRFVHVKADSR 142 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v~v~~~~~ 142 (145)
.|+|.|.|.. .+..+.|...+.
T Consensus 79 ~Y~C~a~~~~---~~a~L~V~~~p~ 100 (104)
T 2eny_A 79 EVVFSVRGLT---SKASLIVRERSG 100 (104)
T ss_dssp CEEEEETTEE---EEECEEEECCCS
T ss_pred EEEEEECCee---EEEEEEEeCCCc
Confidence 9999997642 455677775443
No 106
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.40 E-value=5.5e-13 Score=105.57 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=66.9
Q ss_pred CCCEEEEcCCCCC----ccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCC-CCCCCCCCCe
Q psy5697 45 HYPFRIKSAPGGN----RTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPE-TGFRPDVHST 117 (145)
Q Consensus 45 ~~P~~i~~p~~~~----~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~-~~~~~~~d~G 117 (145)
.+|.|+.+|.+.. ..| +.|.|.+.|+|.|+|+|+ +||..+......+....+|+|.|.++.. + |+|
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~-k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~------D~G 75 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWK-MNGTELKMGPDSRYRLVAGDLVISNPVKAK------DAG 75 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEE-ETTEECCCSTTSSEEEETTEEEEESCCHHH------HCE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEE-ECCEECCcCCCccEEeeCCeEEEecccccc------cCE
Confidence 4789999998722 233 899999999999999998 4888876443344556789999987653 3 899
Q ss_pred EEEEEEEcCCCceEEE--EEEEE
Q psy5697 118 VYRCRASNEAGVILSR--FVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~--~v~v~ 138 (145)
.|+|.|+|..|...+. .+.|.
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~ 98 (382)
T 1cs6_A 76 SYQCVATNARGTVVSREASLRFG 98 (382)
T ss_dssp EEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEEcCCcEEEecceEEEee
Confidence 9999999999987654 44444
No 107
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.40 E-value=3e-13 Score=100.49 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=55.4
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeeccc-CceEEeeCCcEEEcCC-CCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVK-DLRIALSNGSLMFPPF-PETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~-~~~~~~~~GsL~i~~~-~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
+.|.|. |+|.|.|+|+ +||..+.... .......+++|.|.++ ..+ |+|.|+|.|+|..|...+..+.|.
T Consensus 131 v~L~C~--g~p~p~i~W~-k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~------D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 131 VILTCP--QYPGSEILWQ-HNDKNIGGDEDDKNIGSDEDHLSLKEFSELE------QSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp EEEECS--CCCSSCEEEE-ETTEEESCCTTCTTEEEETTEEEETTCCHHH------HCEEEEEEETTSCGGGSSCEEEEE
T ss_pred EEEEcC--CCCCCceEEE-ECCEECCCccCCceEecCCCEEEEeeCCccc------cCEEEEEEeccCCCCceeEEEEEE
Confidence 899999 9999999997 5788775432 2223446899999988 665 899999999999998767777776
Q ss_pred e
Q psy5697 139 A 139 (145)
Q Consensus 139 ~ 139 (145)
+
T Consensus 202 ~ 202 (204)
T 1sy6_A 202 A 202 (204)
T ss_dssp E
T ss_pred E
Confidence 4
No 108
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.40 E-value=1.5e-12 Score=93.58 Aligned_cols=88 Identities=18% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeeccc--CceEEeeCC--cEEEcCCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVK--DLRIALSNG--SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~--~~~~~~~~G--sL~i~~~~~~~~~~~~d~ 116 (145)
..+|.|+..|.+ .. +..+.|.|.+.|.|.|.|+|++ ||..+.... +.+....++ +|.|.++..+ |+
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~ 75 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFR-DGQVISTSTLPGVQISFSDGRAKLTIPAVTKA------NS 75 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-SSSBCCTTTSTTCEEEEETTEEEEEESSCCGG------GC
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEE-CCEEcccccCCceEEEeCCCEEEEEECCCCcc------cC
Confidence 457888888877 22 2339999999999999999985 777765432 333444455 7999888655 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEE
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|.|+|.|.|..|.. .+..+.|.
T Consensus 76 G~Y~C~~~n~~~~~~~~~~l~v~ 98 (194)
T 2a38_A 76 GRYSLKATNGSGQATSTAELLVK 98 (194)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEcCCceEeEEEEEEEc
Confidence 99999999999987 33455554
No 109
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.40 E-value=3e-12 Score=98.67 Aligned_cols=120 Identities=17% Similarity=0.105 Sum_probs=79.5
Q ss_pred ecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeec
Q psy5697 11 ADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAY 87 (145)
Q Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~ 87 (145)
.|++.|.|...+..........-. |..........|.+...|.. .. +..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 74 ~D~G~Y~C~a~n~~g~~~~~~~l~-V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k-~~~~~~~ 151 (304)
T 2yd9_A 74 RDENVYECVAQNSVGEITVHAKLT-VLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVDP 151 (304)
T ss_dssp TTCSEEEEEEECSSCEECCEEEEE-EECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEE-TTEECCG
T ss_pred CCCeEEEEEEECCCCeEEEEEEEE-EeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEE-CCEECcC
Confidence 788889888766543322111111 22222222334788888766 22 2339999999999999999985 7877754
Q ss_pred cc--CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE--EEEEEE
Q psy5697 88 VK--DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVK 138 (145)
Q Consensus 88 ~~--~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s--~~v~v~ 138 (145)
.. .......+|+|.|.++..+ |+|.|+|.|+|..|...+ ..+.|.
T Consensus 152 ~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~~l~v~ 200 (304)
T 2yd9_A 152 SASNGRIKQLRSGALQIESSEET------DQGKYECVATNSAGVRYSSPANLYVR 200 (304)
T ss_dssp GGGTTSEEECTTSCEEECSCCGG------GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCcceEEeCCCeEEEEccCCcc------cCEEEEEEEEeCCCCEEeccEEEEEE
Confidence 32 1234566789999988655 899999999999998753 345543
No 110
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=99.47 Aligned_cols=87 Identities=20% Similarity=0.264 Sum_probs=64.4
Q ss_pred CCCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCc-eE-EeeCC--cEEEcCCCCCCCCCCCCCe
Q psy5697 45 HYPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDL-RI-ALSNG--SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~-~~-~~~~G--sL~i~~~~~~~~~~~~d~G 117 (145)
.+|.|+..|.+ ... ..+.|.|.+.|.|.|+|+|++ +|..+...... .. ...+| +|.|.++..+ |+|
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G 75 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIADGLKYRIQEFKGGYHQLIIASVTDD------DAT 75 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEE-TTEECCCCSSSEEEEEETTTEEEEEESSCCGG------GCS
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCEEcccCCCeEEEEECCCCEEEEEEccCChh------hCe
Confidence 57999999887 223 339999999999999999985 77776543222 22 23455 8999988765 899
Q ss_pred EEEEEEEcCCCce-EEEEEEEE
Q psy5697 118 VYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.|+|.|.|..|.. .+..+.|.
T Consensus 76 ~Y~C~a~n~~g~~~~~~~l~V~ 97 (305)
T 2nzi_A 76 VYQVRATNQGGSVSGTASLEVE 97 (305)
T ss_dssp EEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEcCCCCccceEEEEEe
Confidence 9999999999986 33455554
No 111
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.40 E-value=7.3e-13 Score=86.40 Aligned_cols=60 Identities=10% Similarity=0.157 Sum_probs=46.2
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.+.|.|.+.| |+|.|+|+ +||.++...........++ +|.|.++..+ |+|.|+|.|.|..
T Consensus 13 ~v~l~C~vs~-p~p~v~W~-k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 13 DLELVVHLSG-PGGPVRWY-KDGERLASQGRVQLEQAGARQVLRVQGARSG------DAGEYLCDAPQDS 74 (84)
T ss_dssp CEEEECCCSC-CSTTCEEE-ETTEECCCCSSEEEEECSSCEEEEESSCSST------TCEEEEEECTTTC
T ss_pred CEEEEEEECC-CCcEEEEE-ECCEEccccccEEEeecCCeEEEEecCCCCc------ccEEEEEEECCEE
Confidence 3999999977 99999998 5899987654433333333 6999888765 8999999997754
No 112
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.40 E-value=8.9e-13 Score=87.12 Aligned_cols=86 Identities=9% Similarity=0.089 Sum_probs=55.2
Q ss_pred CCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecc------cCceEEe----eCCcEEEcCCCCCCCCC
Q psy5697 46 YPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYV------KDLRIAL----SNGSLMFPPFPETGFRP 112 (145)
Q Consensus 46 ~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~------~~~~~~~----~~GsL~i~~~~~~~~~~ 112 (145)
+|.|+..|.+ ... ..+.|.|.+.|.|.|.|.|++.++..+... ....... .+++|.|.++..+
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~---- 81 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLS---- 81 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGG----
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChh----
Confidence 4556666666 222 339999999999999999986443232211 1111211 3458999988765
Q ss_pred CCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 113 DVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|.|.|.| .|.. .+..+.|.
T Consensus 82 --D~G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 82 --DEGQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp --GCEEEEEEECS-SSCEEEEEEEEEE
T ss_pred --HCeEEEEEEEc-CCCcEEEEEEEEE
Confidence 89999999999 7765 33344444
No 113
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.39 E-value=4.2e-12 Score=96.48 Aligned_cols=89 Identities=21% Similarity=0.193 Sum_probs=65.6
Q ss_pred CCCCEEEEcCCCC-C--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEee--CCcEEEcCCCCCCCCCCCCCeE
Q psy5697 44 EHYPFRIKSAPGG-N--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALS--NGSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 44 ~~~P~~i~~p~~~-~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~--~GsL~i~~~~~~~~~~~~d~G~ 118 (145)
..||.|...|.+. . +..+.|.|.+.|.|.|.|+|++ ||..+......+.... +++|.|.++..+ |+|.
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~ 75 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAK-DNREIRPGGNYKMTLVENTATLTVLKVTKG------DAGQ 75 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCSSSSEEEEEETTEEEEEESSCCGG------GCEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEE-CCEECcCCCcEEEEEcCCEEEEEEecCCcc------cCEE
Confidence 4578999988872 2 3349999999999999999984 7887764433332222 348999888665 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEEe
Q psy5697 119 YRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|+|.|+|..|.. .+..+.|..
T Consensus 76 Y~C~~~n~~g~~~~~~~l~V~~ 97 (284)
T 2rik_A 76 YTCYASNVAGKDSCSAQLGVQE 97 (284)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCceEEEEEEEEccC
Confidence 999999999986 344555543
No 114
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.38 E-value=1.6e-12 Score=101.11 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=73.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEc-CCC-CC--ccCeEEEeeEeccCCCEEEEEcc---CC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKS-APG-GN--RTRGLELTRQTRYEPSQLGWRFS---NN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~-p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~---dg 82 (145)
..|++.|.|...+.......... .........+|.+... |.+ .. +..+.|.|.+.|+|.|.|+|++. ||
T Consensus 189 ~~d~G~Y~C~a~n~~g~~~~~~~----l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g 264 (334)
T 1ry7_B 189 PSDRGNYTCVVENKFGSIRQTYT----LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNG 264 (334)
T ss_dssp GGGCCCEEEEEEETTEEEEEEEE----EEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGG
T ss_pred cccCEEEEEEEEeCCCCEEEEEE----EEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCC
Confidence 56778888877654432211111 1111111234544332 233 12 23389999999999999999864 66
Q ss_pred eEeecccCce-EEeeC----------CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEecc
Q psy5697 83 TVIAYVKDLR-IALSN----------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKADS 141 (145)
Q Consensus 83 ~~i~~~~~~~-~~~~~----------GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~~~ 141 (145)
..+....... ....+ ++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|...+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 265 SKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFE------DAGEYTCLAGNSIGFSHHSAWLVVLPAE 329 (334)
T ss_dssp CSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTT------SCSEEEEEEEESSCCEEEEEEEEEECSC
T ss_pred ccccCCCCeeEEEeecCccccccccccEEEEccCCHH------HCEEEEEEEeCCCCeEEEEEEEEEEECC
Confidence 6654322111 11111 27999888665 8999999999999998 45567776433
No 115
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.38 E-value=1.2e-12 Score=113.55 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=78.2
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+..... ..........+|.|+..|.+ .. +..+.|.|.+.|+|+|+|+|++ ++..+.
T Consensus 686 ~~d~G~Y~C~a~N~~g~~--------~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k-~~~~~~ 756 (816)
T 3dmk_A 686 ASHAGNFTCHARNLAGHQ--------QFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKK-AVGDTP 756 (816)
T ss_dssp GGGCEEEEEEEECSSCEE--------EEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCE-ECSSST
T ss_pred hhhCEEEEEEEEeCCccE--------EEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEe-cCCCCC
Confidence 456777877775543322 11122334567888888877 22 3338999999999999999975 443221
Q ss_pred c-----ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy5697 87 Y-----VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAD 140 (145)
Q Consensus 87 ~-----~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~~~ 140 (145)
. ....+....+|+|.|.++..+ |+|.|+|.|+|.+|+..+.-..+...
T Consensus 757 ~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~~~v~~~~~~ 809 (816)
T 3dmk_A 757 GEYKDLKKSDNIRVEEGTLHVDNIQKT------NEGYYLCEAINGIGSGLSAVIMISVQ 809 (816)
T ss_dssp TCCBCCCCBTTEEEETTEEEECSCCGG------GCEEEEEEEECSSSSCEEEEEEEEEE
T ss_pred ccccccccCCCEEecCCEEEECcCChh------hCeEEEEEEEeCCCCCcEEEEEEEee
Confidence 1 111234457889999988765 89999999999999997765555433
No 116
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.38 E-value=1.1e-12 Score=95.67 Aligned_cols=107 Identities=10% Similarity=-0.123 Sum_probs=60.0
Q ss_pred eecCceeEeeccccCcccC--CceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPL--GYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+...... ..+. ..+. ....+|.+...|......| +.|.|.+.|.| |.|+|++ ||..+
T Consensus 67 ~~D~G~Y~C~a~n~~g~~~~s~~~~--l~V~---~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p-~~~~W~k-~g~~~ 139 (196)
T 2d3v_A 67 EHHAGRYRCYYYSPAGWSEPSDPLE--LVVT---GFYNKPTLSALPSPVVTSGENVTLQCGSRLRF-DRFILTE-EGDHK 139 (196)
T ss_dssp GGGCEEEEEEEEETTEECBCCCCEE--EEEE---CSSCCCEEEC-----------CEEEEEESSCC-SEEEEEE-C---C
T ss_pred hhHCeEEEEEEeCCCCcCCcCccEE--EEec---CCCCCCeEEccCCccccCCCcEEEEEEcCCCC-CEEEEEc-cCCcc
Confidence 5788888888754322111 1111 1111 1123576665553333333 89999999999 9999985 77665
Q ss_pred ecccCceEEee----CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 86 AYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 86 ~~~~~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
........... .++|.|.++..+ |+|.|+|.|+|..+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 140 LSWTLDSQLTPSGQFQALFPVGPVTPS------HRWMLRCYGSRRHIL 181 (196)
T ss_dssp CEEEEECEECTTSCEEEEEECCCCBTT------BCEEEEEEEEETTEE
T ss_pred cccccccccccCCCceeEEEeeecCcc------cCeeEEEEEEccCCC
Confidence 32111111221 268999888765 899999999998764
No 117
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.38 E-value=2.2e-12 Score=87.66 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=51.7
Q ss_pred CeEEEeeEec--cCCCEEEEEccCCeEeec----ccCceE------EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 60 RGLELTRQTR--YEPSQLGWRFSNNTVIAY----VKDLRI------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 60 g~~L~C~a~G--~P~P~i~W~~~dg~~i~~----~~~~~~------~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.+.|.|.+.| .|.+.|+|++ +|..+.. ...... ...+++|.|.++..+ |+|.|+|.|+|..
T Consensus 25 ~v~L~C~~~g~p~~~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~n~~ 97 (122)
T 3s35_X 25 KLVLNCTARTELNVGIDFNWEY-PSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS------DQGLYTCAASSGL 97 (122)
T ss_dssp CEEEEEEEEECTTCCCEEEEEC-SCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGG------GCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCcEEEEEEC-CCcccCCceeeeeccccccCCceeeEEEEEEECCCCcc------cCEEEEEEEccCC
Confidence 3999999999 5557999985 5443221 011111 123458999988765 8999999999999
Q ss_pred Cce-EEEEEEEEecc
Q psy5697 128 GVI-LSRFVHVKADS 141 (145)
Q Consensus 128 G~~-~s~~v~v~~~~ 141 (145)
|.. .+..+.|...+
T Consensus 98 g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 98 MTKKNSTFVRVHEKP 112 (122)
T ss_dssp CEEEEEEEEEEEEEE
T ss_pred CceEEEEEEEEeccC
Confidence 987 45566666544
No 118
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.37 E-value=2.7e-12 Score=91.88 Aligned_cols=107 Identities=11% Similarity=0.032 Sum_probs=64.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccC-CeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSN-NTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~d-g~~i~ 86 (145)
..|++.|.|............ .......+|.+...+......| +.|.|.+.|+|.|.|+|++.+ |..+.
T Consensus 67 ~~d~G~Y~C~~~~~~~~~~~~--------~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~ 138 (192)
T 2va4_A 67 NSDGGPYVCRATNKAGEDEKQ--------AFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFT 138 (192)
T ss_dssp GGGCEEEEEEEEETTEEEEEE--------EEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEEC
T ss_pred hhcCcEEEEEEEccccccceE--------EEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceee
Confidence 456677777664432221111 1111233455555443322223 899999999999999998632 55554
Q ss_pred cc----cCceEEe-e--CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 87 YV----KDLRIAL-S--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 87 ~~----~~~~~~~-~--~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.. .+..... . +++|.|.++..+ |+|.|+|.|+|.+|..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~ 183 (192)
T 2va4_A 139 EGDKSLDGRIEVKGQHGSSSLHIKDVKLS------DSGRYDCEAASRIGGH 183 (192)
T ss_dssp TTCBCTTSCEEEEEETTEEEEEEESCCGG------GCEEEEEEEECSSCEE
T ss_pred ccccccCCcEEEeeccCceEEEEecCCcc------cCEEEEEEEEecCCce
Confidence 21 1111221 1 247999887655 8999999999999996
No 119
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.37 E-value=4.2e-14 Score=121.23 Aligned_cols=118 Identities=14% Similarity=0.174 Sum_probs=0.0
Q ss_pred eecCceeEeecccc-CcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSL-FPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+. ...... .. .........+|.|+..+.+ ....| +.|.|.+.|+|+|+|+|+ +||..+
T Consensus 634 ~~d~G~Y~C~a~n~~~~~~~s-~~----~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~-k~g~~l 707 (772)
T 3v2a_R 634 LQDQGDYVCLAQDRKTKKRHC-VV----RQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWF-KDNETL 707 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCcEEEEEEEeCCCCeEEE-EE----EeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEE-ECCeEC
Confidence 67788888877552 211100 00 0011123457888877766 23333 899999999999999997 588877
Q ss_pred ecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 86 AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
....+......+++|.|.++..+ |+|.|+|.|+|.+|+. .+..+.|..
T Consensus 708 ~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~~ 756 (772)
T 3v2a_R 708 VEDSGIVLKDGNRNLTIRRVRKE------DEGLYTCQACSVLGCAKVEAFFIIEG 756 (772)
T ss_dssp -------------------------------------------------------
T ss_pred cCCCCeEEcCCCcEEEECcCCHH------HCEEEEEEEEeCCcceeEEEEEEEEC
Confidence 65433323334679999988765 8999999999999998 555777763
No 120
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.37 E-value=3.4e-12 Score=91.35 Aligned_cols=86 Identities=20% Similarity=0.198 Sum_probs=61.2
Q ss_pred CCEEEEcCCC---CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 46 YPFRIKSAPG---GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 46 ~P~~i~~p~~---~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
||.|...+.. .... .+.|.|.+.|.|.|.|+|++ +|..+...........+++|.|.++..+ |+|.|+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~ 74 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYILKGSNTELTVRNIINS------DGGPYV 74 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCCSSSEEEETTTTEEEECSCCGG------GCEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCCCccEEEeCCeeEEEEecCChh------cCcEEE
Confidence 5666655442 2223 39999999999999999984 7888765433333334557999988765 899999
Q ss_pred EEEEcCCCce-EEEEEEEE
Q psy5697 121 CRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 121 C~A~N~~G~~-~s~~v~v~ 138 (145)
|.|.|..|.. .+..+.|.
T Consensus 75 C~~~~~~~~~~~~~~l~V~ 93 (192)
T 2va4_A 75 CRATNKAGEDEKQAFLQVF 93 (192)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEccccccceEEEEEEE
Confidence 9999999986 33345554
No 121
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.37 E-value=2.3e-12 Score=93.19 Aligned_cols=86 Identities=10% Similarity=0.118 Sum_probs=62.6
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEe-ccCCCEEEEEccCCeEeecccC--ceEE-ee--------CCcEEEcCCCCCCC
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQT-RYEPSQLGWRFSNNTVIAYVKD--LRIA-LS--------NGSLMFPPFPETGF 110 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~-G~P~P~i~W~~~dg~~i~~~~~--~~~~-~~--------~GsL~i~~~~~~~~ 110 (145)
+|.|+..|.+ .. +..+.|.|.+. |.|.|.|+|++ ||..+..... .+.. .. +++|.|.++..+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~-- 78 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS-- 78 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST--
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEE-CCEEcccCCCCceEEEEccccccceeeccEEEEEecccc--
Confidence 6788888887 22 33399999999 99999999985 8888764321 1222 22 358999888655
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 111 RPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|+|.|+|.|.|..|...+..+.|.
T Consensus 79 ----d~G~Y~C~~~~~~~~~~~~~~~l~ 102 (195)
T 2c5d_C 79 ----DTGQYQCLVFLGHQTFVSQPGYVG 102 (195)
T ss_dssp ----TCEEEEEEEEETTEEEECCCEEEE
T ss_pred ----CCcEEEEEEEeCCCceecccEEEE
Confidence 899999999999988755434433
No 122
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=2.6e-12 Score=93.13 Aligned_cols=73 Identities=23% Similarity=0.347 Sum_probs=54.3
Q ss_pred CeEEEee-EeccCCCEEEEEccCCe-EeecccC--------ceEE-eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 60 RGLELTR-QTRYEPSQLGWRFSNNT-VIAYVKD--------LRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 60 g~~L~C~-a~G~P~P~i~W~~~dg~-~i~~~~~--------~~~~-~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
.+.|.|. +.|+|.|+|+|++ +|. .+..... .... ..+++|.|.++..+ |+|.|+|.|+|.+|
T Consensus 121 ~~~l~C~~~~~~p~~~i~W~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g 193 (212)
T 1f97_A 121 RAVLTCSEHDGSPPSEYSWFK-DGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAF------DSGEYYCQAQNGYG 193 (212)
T ss_dssp CEEEEEECSCCBSCCEEEEEE-TTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGG------GCEEEEEEEECSSS
T ss_pred eEEEEEEcccCcCCCEEEEEe-CCcccccccccccccccCceeEecCCCceEEEEecChh------hCcEEEEEEccccC
Confidence 3899999 7999999999985 777 6653221 1111 34678999888665 89999999999999
Q ss_pred ce-EEEEEEEEe
Q psy5697 129 VI-LSRFVHVKA 139 (145)
Q Consensus 129 ~~-~s~~v~v~~ 139 (145)
.. .+..++|..
T Consensus 194 ~~~~s~~~~l~V 205 (212)
T 1f97_A 194 TAMRSEAAHMDA 205 (212)
T ss_dssp CCEECCCEEEEE
T ss_pred CccccceEEEEE
Confidence 98 666666664
No 123
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.37 E-value=4.7e-12 Score=90.76 Aligned_cols=106 Identities=10% Similarity=0.083 Sum_probs=69.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC--ccCeEEEeeE-eccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN--RTRGLELTRQ-TRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a-~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|..........-.+. +. .++.++..+.... +..+.|.|.+ .|.|.|+|+|++ ||..+.
T Consensus 60 ~~d~G~Y~C~~~~~~~s~~~~l~---V~-------~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (176)
T 1f2q_A 60 FEDSGEYKCQHQQVNESEPVYLE---VF-------SDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYK-DGEALK 128 (176)
T ss_dssp GGGCEEEEEECTTSSCCCCEEEE---EE-------CSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEE-TTEECC
T ss_pred eecCEEEEEEcCCccccccEEEE---Ee-------CcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEE-CCEEEe
Confidence 67888888887653222210111 11 3455555554422 2339999999 577888999985 887763
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.. ..+++|.|.++..+ |+|.|+|.|.|..|...+..+.|.
T Consensus 129 ~~------~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~s~~~~l~ 168 (176)
T 1f2q_A 129 YW------YENHNISITNATVE------DSGTYYCTGKVWQLDYESEPLNIT 168 (176)
T ss_dssp SC------CCSSEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEE
T ss_pred ee------cCCCeEEECCCCcc------cCEEEEEEEEeCCcceEecCEEEE
Confidence 21 23568999888665 899999999998776655544444
No 124
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.36 E-value=1.7e-12 Score=96.40 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=45.8
Q ss_pred eEEEeeEec-cCCCEEEEEccCCeEeecccCceEEeeCCcEE---EcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEE
Q psy5697 61 GLELTRQTR-YEPSQLGWRFSNNTVIAYVKDLRIALSNGSLM---FPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 61 ~~L~C~a~G-~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~---i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v 135 (145)
+.|.|.+.| .|+|+|+|++.+|..+...........+|.+. +..+..+ |+|.|+|.|+|.+|.. .+..+
T Consensus 136 v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~------d~G~YtC~a~N~~g~~~~~~~v 209 (226)
T 4f80_A 136 IHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGS------SGEGVSCTIRSSLLGLEKTASI 209 (226)
T ss_dssp EEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----------CEEEEEEETTTTEEEEEEE
T ss_pred eeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechh------cCcEEEEEEEeCCCCeEEEEEE
Confidence 899999988 59999999876776655433333444556433 3234333 8999999999999987 34344
Q ss_pred EE
Q psy5697 136 HV 137 (145)
Q Consensus 136 ~v 137 (145)
.|
T Consensus 210 ~v 211 (226)
T 4f80_A 210 SI 211 (226)
T ss_dssp CC
T ss_pred EE
Confidence 44
No 125
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.36 E-value=2.9e-12 Score=101.49 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=70.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+......... ......+|.|...+.. .. +..+.|.|.+.|+|+|+|+|+ +||..+.
T Consensus 72 ~~D~G~Y~C~a~n~~g~~~~~~--------~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~-~~g~~l~ 142 (389)
T 2jll_A 72 LSDSGRYDCEAASRIGGHQKSM--------YLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWR-RDKLVLP 142 (389)
T ss_dssp GGGCEEEEEEEECSSCEEEEEE--------EEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEE-ETTEESS
T ss_pred hhhCEEEEEEEEeCCCCcceEE--------EEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEE-ECCccCC
Confidence 5677888887765443322111 1122345665554433 12 233899999999999999997 5888876
Q ss_pred cccC-ceEEeeC---CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE
Q psy5697 87 YVKD-LRIALSN---GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 132 (145)
Q Consensus 87 ~~~~-~~~~~~~---GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s 132 (145)
.... ......+ ++|.|.++..+ |+|.|+|.|.|..|...+
T Consensus 143 ~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~ 186 (389)
T 2jll_A 143 AKNTTNLKTYSTGRKMILEIAPTSDN------DFGRYNCTATNHIGTRFQ 186 (389)
T ss_dssp CTTCTTEEEEECSSCEEEEECCCSTT------SSEEEEEEEEETTEEEEE
T ss_pred cccCceEEEeccCCEEEEEECCCChh------hCEEEEEEEEcCCCcEEE
Confidence 4331 2233333 36999887655 899999999999999743
No 126
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.36 E-value=3.3e-12 Score=93.15 Aligned_cols=112 Identities=10% Similarity=-0.088 Sum_probs=64.3
Q ss_pred eceee-eecCceeEeeccccC-c--ccCCceeeeEEEeccCCCCCCCEEEEcCCCCCcc--CeEEEeeEeccCCCEEEEE
Q psy5697 5 HISTL-LADADTYIIADRSLF-P--RPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRT--RGLELTRQTRYEPSQLGWR 78 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~-p--~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~--g~~L~C~a~G~P~P~i~W~ 78 (145)
.|..+ ..|++.|.|...+.. . .....+. ..+. ....+|.+...|...... .+.|.|.+.|. +|.|+|+
T Consensus 61 ~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~--l~V~---~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~-~~~v~W~ 134 (198)
T 1ugn_A 61 PIPSITWEHTGRYRCYYGSDTAGRSESSDPLE--LVVT---GAYIKPTLSAQPSPVVNSGGNVTLQCDSQVA-FDGFILC 134 (198)
T ss_dssp EESSCCGGGCEEEEEEEEETTTEECCCCCCEE--EEEE---CSSCCCEEEEESCSEEETTCCEEEEEECSSC-CSEEEEE
T ss_pred EECCCCHHHCeEEEEEEECCCCCcccCCccEE--EEEc---ccccCCccccCCccccCCCCcEEEEEecCCC-CcEEEEE
Confidence 34333 678889999886543 2 1111111 1111 112356666555432223 39999999998 8999998
Q ss_pred ccCCeEeecccCceEEee----CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 79 FSNNTVIAYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 79 ~~dg~~i~~~~~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+ ||..+........... +++|.|.++..+ |+|.|+|.|+|..+.
T Consensus 135 k-~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~~ 182 (198)
T 1ugn_A 135 K-EGEDEHPQCLNSQPHARGSSRAIFSVGPVSPS------RRWWYRCYAYDSNSP 182 (198)
T ss_dssp E-C------CEEEC------CCEEEEEECCCCTT------SCEEEEEEEECTTST
T ss_pred E-CCCccCCccccccccCCCcceeEEEecccCcc------cCeEEEEEEEeCCCC
Confidence 5 7766532111111111 368999988765 899999999999874
No 127
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.4e-12 Score=103.44 Aligned_cols=104 Identities=13% Similarity=0.007 Sum_probs=67.1
Q ss_pred eecCc-eeEeeccccCcccCCceeeeEEEeccCCCCCCCEE-EEcCCCCCccCeEEEeeEeccCCCEEEEEccCCeEeec
Q psy5697 10 LADAD-TYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFR-IKSAPGGNRTRGLELTRQTRYEPSQLGWRFSNNTVIAY 87 (145)
Q Consensus 10 ~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~-i~~p~~~~~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~ 87 (145)
..|++ .|.|...+...... .........+|.+ +..+. .+..+.|.|.+.|+|.|+|+|+ +||..+..
T Consensus 221 ~~D~G~~Y~C~a~n~~g~~~--------~~~~l~V~~~P~i~~~~~~--~g~~v~l~C~~~g~P~p~i~W~-~~g~~l~~ 289 (347)
T 2ifg_A 221 SDLNRKNVTCWAENDVGRAE--------VSVQVNVSFPASVQLHTAV--EMHHWCIPFSVDGQPAPSLRWL-FNGSVLNE 289 (347)
T ss_dssp STTTTCCEEECCEETTEECC--------EEECCCCBEEEEEEECCCE--ESSSEEEEEEEEEESCCEEEEE-ETTEECCC
T ss_pred hHHCCCeEEEEEEcCCCCEE--------EEEEEEEcCCCeeeeccCc--cCceEEEEEEeeecCCCcEEEE-eCCEECCC
Confidence 45666 66666544322211 1122334456664 33332 1234899999999999999997 58888764
Q ss_pred ccCceE-Ee--------eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 88 VKDLRI-AL--------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 88 ~~~~~~-~~--------~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
...... .. .+|+|.|.++..+ |+|.|+|.|+|.+|..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~N~~G~~ 335 (347)
T 2ifg_A 290 TSFIFTEFLEPAANETVRHGCLRLNQPTHV------NNGNYTLLAANPFGQA 335 (347)
T ss_dssp CSSEEEEECCCCTTCCCEEEEEEESSCCGG------GCEEEEEEEEETTEEE
T ss_pred CcceeeEEEeecCCCcccceEEEECCCCcc------cCceEEEEEecCCCce
Confidence 332221 11 2567999888655 8999999999999986
No 128
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.35 E-value=7.2e-12 Score=92.10 Aligned_cols=117 Identities=10% Similarity=0.000 Sum_probs=68.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeE-eccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQ-TRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a-~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...... .....+. + .......+|.+...+......| +.|.|.+ .|.|.|.|+|++.+|..+.
T Consensus 81 ~~D~G~Y~C~~~~~~-~~~~~~~---l--~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~ 154 (222)
T 4i0k_A 81 VTDEGSYTCFVSIQD-FDSAAVS---L--QVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLT 154 (222)
T ss_dssp GGGCSCEEEEEEECC-CCCCCCC---C--CCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred cccCEEEEEEEEeCC-CceEEEE---E--EEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCC
Confidence 677788888765421 1100000 0 0011123466665554333333 8999999 9999999999865776654
Q ss_pred cccCce-EEeeCCc---EEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 87 YVKDLR-IALSNGS---LMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~-~~~~~Gs---L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
...... ....+|. |.|.++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 155 ~~~~~~~~~~~~~~~~~l~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 155 GNVTTSQMANERGLFDVHSVLRVVLG------ANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp SEEEEEEEECTTSCEEEEEEEEEECC------TTCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCcceeEEcCCCCeEEEEEEEEEEeC------CCCEEEEEEECCCCCCceEEEEEEe
Confidence 321111 2234454 677777655 8999999999999987 44455554
No 129
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.35 E-value=2.1e-12 Score=108.97 Aligned_cols=109 Identities=10% Similarity=-0.003 Sum_probs=70.6
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC---CCcc--CeEEEeeEeccCCCEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG---GNRT--RGLELTRQTRYEPSQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~---~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~ 84 (145)
..|++.|.|...+. ... . .......+|.+...|.. .... .+.|.|.+.|+|+|+|+|+ +||..
T Consensus 299 ~~DsG~Y~C~a~N~-~~~----~------~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~-k~g~~ 366 (527)
T 3qs9_E 299 RNDTGYYTCSSSKH-PSQ----S------ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWT-FSRKS 366 (527)
T ss_dssp GGGCEEEEEEETTE-EEE----E------EEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEE-ETTEE
T ss_pred cccCeEEEEEEEeC-CCc----e------EEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEE-ECCEE
Confidence 56777777777554 100 1 11122335655544432 2223 3899999999999999997 58888
Q ss_pred eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 85 IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 85 i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+..... ....+++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 367 l~~~~~--~~~~~~~L~I~~v~~~------D~G~YtC~A~N~~g~~~~~~~L~V~ 413 (527)
T 3qs9_E 367 FPCEQK--GLDNGYSISKFCNHKH------QPGEYIFHAENDDAQFTKMFTLNIR 413 (527)
T ss_dssp EECBCC--BCSSSSEEEEECCCTT------CCSCEEEEEEETTEEEEEEEEEC--
T ss_pred CcCCcc--cccCCcEEEEecCCcc------cCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 865432 2335668999888665 8999999999999987 34455554
No 130
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.35 E-value=9.8e-12 Score=82.01 Aligned_cols=83 Identities=16% Similarity=0.030 Sum_probs=59.0
Q ss_pred CCCCEEEEcCCC--CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG--GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~--~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~ 116 (145)
..+|.|++.+.+ ....| +.|.|.+. .|.|.|+|++ ||..+...... .+..+| +|.|.++..+ |+
T Consensus 5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k-~g~~i~~~~~~-~~~~~~~~~~L~I~~~~~~------D~ 75 (100)
T 2yuv_A 5 SSGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYK-NGQEIRPSTKY-IFEHKGCQRILFINNCQMT------DD 75 (100)
T ss_dssp SSSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEE-SSCBCCCBTTE-EEEEETTEEEEEEEEECTT------TC
T ss_pred CCCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEE-CCEECCCCCCE-EEEecCCEEEEEEcCCCcC------cC
Confidence 457899988886 23334 89999999 7999999985 77777654433 333333 5999888765 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|+|.| |.. .+..+.|..
T Consensus 76 G~Y~C~a----g~~~~~~~l~V~~ 95 (100)
T 2yuv_A 76 SEYYVTA----GDEKCSTELFVRS 95 (100)
T ss_dssp CEEEEEE----TTEEEEEEEEECC
T ss_pred EEEEEEE----CCceEEEEEEEec
Confidence 9999999 554 444555553
No 131
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.35 E-value=1.5e-12 Score=89.56 Aligned_cols=75 Identities=20% Similarity=0.120 Sum_probs=53.0
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeec------ccCceEEe--e--CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAY------VKDLRIAL--S--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~------~~~~~~~~--~--~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.+.|.|.+.|.|.|.|+|++.++..+.. ..+..... . +++|.|.++..+ |+|.|+|.|.|. |.
T Consensus 18 ~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~n~-g~ 90 (124)
T 3rbg_A 18 TLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQ------DEGVYKCLHYSD-SV 90 (124)
T ss_dssp CEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGG------GCEEEEEEEESS-SE
T ss_pred CEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChH------HCEEEEEEEEcC-CC
Confidence 3999999999999999998655544320 11111221 1 358999988765 899999999999 87
Q ss_pred e-EEEEEEEEecc
Q psy5697 130 I-LSRFVHVKADS 141 (145)
Q Consensus 130 ~-~s~~v~v~~~~ 141 (145)
. .+..+.|...+
T Consensus 91 ~~~~~~l~V~~~P 103 (124)
T 3rbg_A 91 STKEVKVIVLATM 103 (124)
T ss_dssp EEEEEEEEEECC-
T ss_pred CcEEEEEEEEeCC
Confidence 6 45567776544
No 132
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.35 E-value=5.1e-12 Score=100.02 Aligned_cols=88 Identities=13% Similarity=0.120 Sum_probs=60.9
Q ss_pred CCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEcc-CCeEeecc----cCceEEe---eCCcEEEcCCCCCCCCCCCC
Q psy5697 46 YPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFS-NNTVIAYV----KDLRIAL---SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 46 ~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~-dg~~i~~~----~~~~~~~---~~GsL~i~~~~~~~~~~~~d 115 (145)
+|.|+..+......| +.|.|.+.|+|.|.|+|++. +|..+... .+...+. .+++|.|.++..+ |
T Consensus 1 ~P~i~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D 74 (389)
T 2jll_A 1 QPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS------D 74 (389)
T ss_dssp CCEEEECCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGG------G
T ss_pred CCeEEecCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChh------h
Confidence 477776333233334 89999999999999999863 28777531 1122222 2458999988765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+|.|+|.|+|..|.. .+..+.|..
T Consensus 75 ~G~Y~C~a~n~~g~~~~~~~l~V~~ 99 (389)
T 2jll_A 75 SGRYDCEAASRIGGHQKSMYLDIEY 99 (389)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred CEEEEEEEEeCCCCcceEEEEEEEe
Confidence 999999999999987 344555553
No 133
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.35 E-value=1.1e-11 Score=91.96 Aligned_cols=106 Identities=12% Similarity=0.029 Sum_probs=68.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCcc--CeEEEeeEecc-CCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRT--RGLELTRQTRY-EPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~--g~~L~C~a~G~-P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+..... .+. .....+|.++..|...... .+.|.|.+.+. |.|+|+|+ +||..+.
T Consensus 63 ~~D~G~Y~C~a~n~~~s~--~~~--------l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~-k~g~~~~ 131 (204)
T 3sgj_C 63 VDDSGEYRCQTQLSTLSD--PVQ--------LEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYL-QNGKGRK 131 (204)
T ss_dssp GGGCEEEEEEETTSBCCC--CEE--------EEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEE-ETTEEEE
T ss_pred ccCCEEEEEEeCCCcccc--cEE--------EEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEE-ECCcEee
Confidence 578888888765421111 111 1112345566665543323 39999999666 56999997 5887753
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
. ...+++|.|.++..+ |+|.|+|.|+|..|...+..+.|.
T Consensus 132 ~------~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~~~~s~~~~l~ 171 (204)
T 3sgj_C 132 Y------FHHNSDFYIPKATLK------DSGSYFCRGLVGSKNVSSETVQIT 171 (204)
T ss_dssp E------EEECCCEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEE
T ss_pred c------ccCCceEEECcCCcc------cCEEEEEEEEeCCCceecCcEEEE
Confidence 2 234679999988765 899999999997665555544444
No 134
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.34 E-value=2.4e-12 Score=93.80 Aligned_cols=116 Identities=14% Similarity=0.023 Sum_probs=71.8
Q ss_pred eecCceeEeeccccCc--ccCCceeeeEEEeccCCCCCCCEEEEcCCCCCc--cCeEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFP--RPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNR--TRGLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+... .....+. ..+ .....+|.+...|..... ..++|.|.+.| +++.+.|++ ||..+
T Consensus 67 ~~D~G~Y~C~a~n~~g~~~~s~~~~--l~V---~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 139 (196)
T 3p2t_A 67 EDYAGRYRCYYRSPVGWSQPSDPLE--LVM---TGAYSKPTLSALPSPLVTSGKSVTLLCQSRS-PMDTFLLCK-ERAAH 139 (196)
T ss_dssp GGGCEEEEEEEEETTEEBCCCCCEE--EEE---ECSSCCCEEEEESCSEECTTCCEEEEEEEEE-EEEEEEEEE-TTCCC
T ss_pred cccCceEEEEEeCCCcccCCCccEE--EEe---cCCCCCCEEEeCCcceecCCCeEEEEEecCC-CCCEEEEEe-CCCcc
Confidence 5788888888755432 1111111 011 112346777766664323 33999999999 567999985 77655
Q ss_pred ecccCce---EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC----ceEEEEEEEE
Q psy5697 86 AYVKDLR---IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG----VILSRFVHVK 138 (145)
Q Consensus 86 ~~~~~~~---~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G----~~~s~~v~v~ 138 (145)
....... ....+++|.|.++..+ |+|.|+|.|+|.++ +..|..+.|.
T Consensus 140 ~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 193 (196)
T 3p2t_A 140 PLLCLRSEHGAQQHQAEFPMSPVTSV------HGGTYRCFSSHGFSHYLLSHPSDPLELI 193 (196)
T ss_dssp GGGSEEEEEEEEEEEEEEEECSCCGG------GCEEEEEEEECGGGTTEECCCCCCEEEE
T ss_pred cceeecccccccCcceEEEeCCCccc------CCCeEEEEEEcCCCCcccCCCCCCEEEE
Confidence 3221111 1234678999988765 89999999999998 3445545544
No 135
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.34 E-value=1.1e-12 Score=101.14 Aligned_cols=113 Identities=13% Similarity=0.056 Sum_probs=67.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC--CC--ccCeEEEeeEeccCCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG--GN--RTRGLELTRQTRYEPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~--~~--~~g~~L~C~a~G~P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+-.-... .. .........+|.+...+.+ .. +..+.|.|.+.|+|+| .|+|++ ++..
T Consensus 181 ~~d~g~Y~C~a~n~~~~~~--~~----~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k-~~~~ 253 (308)
T 4fom_A 181 FARGRRITCVVKHPALEKD--IR----YSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSR-LDGQ 253 (308)
T ss_dssp GGTTCEEEEEEECTTCSSC--EE----EEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCB-SSSC
T ss_pred ecCCccEEEEEEccCCCCc--eE----EeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEE-CCeE
Confidence 3566677776644211110 11 1112334556766555544 11 2338999999999999 699975 5555
Q ss_pred eecccCceEEeeCCc-EEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 85 IAYVKDLRIALSNGS-LMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 85 i~~~~~~~~~~~~Gs-L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+... ....+++ |.|.++..+ |+|.|+|.|+|.+|+. .+..+.|..
T Consensus 254 ~~~~----~~~~~~~~l~i~~v~~~------d~G~Y~C~A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 254 WPDG----LLASDNTLHFVHPLTFN------YSGVYICKVTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp CCSS----CBCSTTEEECCSCCCSC------CCSEEEEEEEETTEEEEEEEECCEEC
T ss_pred CCCc----EEEcCCeEEEECCCChh------hCEEEEEEEEeCCCcEEEEEEEEEEc
Confidence 5321 2233454 445556544 8999999999999987 444555553
No 136
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.34 E-value=2.2e-12 Score=92.54 Aligned_cols=82 Identities=16% Similarity=0.261 Sum_probs=58.7
Q ss_pred CCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC-cEEEcCCCCCCCCCCCCCeEEE
Q psy5697 45 HYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG-SLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 45 ~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G-sL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+|.|+..|.+ .. +..+.|.|.+.|+|.|.|+|++ +|..+...........+| +|.|.++..+ |+|.|+
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~ 78 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTR-NKILIKLFDTRYSIRENGQLLTILSVEDS------DDGIYC 78 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCTTCTTEEEEGGGTEEEESSCCGG------GCEEEE
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEccccCccEEEcCCccEEEEcCCCcc------cCeEEE
Confidence 45666655554 12 2338999999999999999985 777776433333333444 6999887655 899999
Q ss_pred EEEEcCCCceEEE
Q psy5697 121 CRASNEAGVILSR 133 (145)
Q Consensus 121 C~A~N~~G~~~s~ 133 (145)
|.|.|..|...+.
T Consensus 79 C~~~~~~~~~~~~ 91 (192)
T 2iep_A 79 CTANNGVGGAVES 91 (192)
T ss_dssp EEEECSSSCCEEE
T ss_pred EEEEcCCCceeEe
Confidence 9999999985433
No 137
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.33 E-value=9.3e-12 Score=89.32 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=61.0
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccC-CCEEEEEccCCeEeecccCceEEe----eCCcEEEcCCCCCCCCCCCCCe
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYE-PSQLGWRFSNNTVIAYVKDLRIAL----SNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P-~P~i~W~~~dg~~i~~~~~~~~~~----~~GsL~i~~~~~~~~~~~~d~G 117 (145)
++.|...|++ .. +..+.|.|.+.|.| .|.|+|++.||..+.......... .+++|.|.++..+ |+|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G 75 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANID------DAG 75 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGG------GCE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcc------cCE
Confidence 4456666665 22 33399999999988 899999865888776333222222 2358999888655 899
Q ss_pred EEEEEEEcCCCceEEEEEEEE
Q psy5697 118 VYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.|+|.|.|..|...+..+.|.
T Consensus 76 ~Y~C~~~~~~~~~~~~~~~l~ 96 (191)
T 1epf_A 76 IYKCVVTAEDGTQSEATVNVK 96 (191)
T ss_dssp EEEEEEEETTTEEEEEEEEEE
T ss_pred EEEEEEEcCCCcceEEEEEEE
Confidence 999999999976555555554
No 138
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=6.9e-12 Score=84.13 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=57.6
Q ss_pred CCCCEEEEcCCC----CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPG----GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDV 114 (145)
Q Consensus 44 ~~~P~~i~~p~~----~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~ 114 (145)
..+|.++..|.+ .. +..+.|.|.+. .|.|.|+|++ ||..+...... ....+| +|.|.++..+
T Consensus 8 ~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~~~-~~~~~~~~~~L~I~~v~~~------ 78 (113)
T 2cpc_A 8 TDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTK-DGEEVVESPAL-LLQKEDTVRRLVLPAVQLE------ 78 (113)
T ss_dssp CSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEE-TTEECCCBTTB-EEEECSSEEEEEESSCCTT------
T ss_pred ccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEE-CCEECccCCCE-EEEECCCEEEEEECCCCcc------
Confidence 445656666654 12 22389999995 8999999985 88887654433 333333 7999888765
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEe
Q psy5697 115 HSTVYRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 115 d~G~Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
|+|.|+|.|.| ...+..+.|..
T Consensus 79 D~G~Y~C~a~n---~~~~~~l~V~~ 100 (113)
T 2cpc_A 79 DSGEYLCEIDD---ESASFTVTVTE 100 (113)
T ss_dssp TCEEEEEESSS---CEEEEEEEEEC
T ss_pred cCEEEEEEEec---CcEEEEEEEec
Confidence 89999999999 23444566653
No 139
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.33 E-value=2.9e-12 Score=94.03 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=64.1
Q ss_pred CCCCCEEEEcC----CC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCc---eEEeeCCcEEEcCCCCCCCCC
Q psy5697 43 NEHYPFRIKSA----PG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDL---RIALSNGSLMFPPFPETGFRP 112 (145)
Q Consensus 43 ~~~~P~~i~~p----~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~---~~~~~~GsL~i~~~~~~~~~~ 112 (145)
...+|+|+..+ .. .. +..+.|.|.+.|.|.|.|+|++ +|..+...... .....+++|.|.++..+
T Consensus 12 ~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~---- 86 (231)
T 3ojm_B 12 NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQHWSLIMESVVPS---- 86 (231)
T ss_dssp -CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCGGGSTTCCEEEGGGTEEEECSCCGG----
T ss_pred CccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccccccccceeeecCcceEEEecCCcc----
Confidence 34567777666 33 22 2339999999999999999985 78877643322 23445568999988655
Q ss_pred CCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 113 DVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|+|.|+|.|+|..|.. .+..+.|..
T Consensus 87 --d~G~Y~C~~~n~~~~~~~~~~l~V~~ 112 (231)
T 3ojm_B 87 --DKGNYTCVVENEYGSINHTYHLDVVE 112 (231)
T ss_dssp --GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred --cCEEEEEEEecccCcccccEEEEEEc
Confidence 8999999999999987 344555553
No 140
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.33 E-value=8.2e-12 Score=92.33 Aligned_cols=116 Identities=12% Similarity=0.014 Sum_probs=66.1
Q ss_pred eecCceeEeeccccCcccCCc-eeeeEEEeccCCCCCCCEEEEcCCC--CCccC--eEEEeeEeccCC--CEEEEEccCC
Q psy5697 10 LADADTYIIADRSLFPRPLGY-LVGNIVYSSRSENEHYPFRIKSAPG--GNRTR--GLELTRQTRYEP--SQLGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~P~~i~~p~~--~~~~g--~~L~C~a~G~P~--P~i~W~~~dg 82 (145)
..|++.|.|...+......+. +. +.. ....+|.+...|+. ....| +.|.|.+.|.|. +.|+|++ +|
T Consensus 73 ~~D~G~Y~C~a~n~~~~~~s~~~~---l~v---~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~g 145 (213)
T 2x1w_L 73 ISYAGMVFCEAKINDESYQSIMYI---VVV---VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PS 145 (213)
T ss_dssp TTTCSEEEEEEC----CEECCCEE---EEE---CBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEEC-SC
T ss_pred hhcCceEEEEEEECCeeEEEEEEE---EEE---eCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEe-cC
Confidence 578889988875522111110 11 111 11234544444443 22333 999999999664 5899975 55
Q ss_pred eEeecccC-c-eE--------EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 83 TVIAYVKD-L-RI--------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 83 ~~i~~~~~-~-~~--------~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
..+..... . .. ....++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 146 SKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS------DQGLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp SSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CccceEEEeccccccccCccceeeeEEEEECCCCcc------cCEEEEEEEecCCCcEEEEEEEEEe
Confidence 54321100 0 00 112347999988765 8999999999999987 34455554
No 141
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.33 E-value=8.4e-12 Score=91.44 Aligned_cols=84 Identities=17% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeeccc--CceEEeeCCcEE----EcCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVK--DLRIALSNGSLM----FPPFPETGFRPD 113 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~--~~~~~~~~GsL~----i~~~~~~~~~~~ 113 (145)
...+|.|+..|.+ .. +..+.|.|.+.|+|.|.|+|++ ||..+.... ..+....+|++. |.++..
T Consensus 6 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~------ 78 (217)
T 2vr9_A 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKE------ 78 (217)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEE-TTEECCCSSSSSSEEECTTSCEEESSCCBSSSC------
T ss_pred ccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccCCCccceeEEecCCceEEEEEeccCCc------
Confidence 4568999999887 22 3339999999999999999985 788776432 234556677665 333433
Q ss_pred CCCeEEEEEEEcCCCceEEE
Q psy5697 114 VHSTVYRCRASNEAGVILSR 133 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~G~~~s~ 133 (145)
.|+|.|+|.|.|..|...+.
T Consensus 79 ~d~G~Y~C~~~n~~g~~~~~ 98 (217)
T 2vr9_A 79 QDGGEYWCVAKNRVGQAVSR 98 (217)
T ss_dssp BCCEEEEEEEEETTEEEECC
T ss_pred ccCceEEEEEecCCCccccc
Confidence 38999999999999987544
No 142
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.6e-12 Score=87.11 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=58.9
Q ss_pred CCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEee-C--CcEEEcCCCCCCCCCCCCCeEE
Q psy5697 46 YPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALS-N--GSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~-~--GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
++.|+..|.+ ....| +.|.|.+.|.|.|.|+|++ ||..+........... + .+|.|.++..+ |+|.|
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y 85 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHANELNEIDAQPGGYHVLTLRQLALK------DSGTI 85 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECCSSSCCBCCBTTTBCCBEECSCCTT------TCEEE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCCCCcEEEEEcCCCEEEEEEcCCChh------hCEEE
Confidence 4578888876 23333 8999999999999999985 8887765433222212 2 27999988765 89999
Q ss_pred EEEEEcCCCce-EEEEEEEEecc
Q psy5697 120 RCRASNEAGVI-LSRFVHVKADS 141 (145)
Q Consensus 120 ~C~A~N~~G~~-~s~~v~v~~~~ 141 (145)
+|.+ |.. .+..+.|...+
T Consensus 86 ~C~~----g~~~~~~~L~V~~~p 104 (115)
T 2cr6_A 86 YFEA----GDQRASAALRVTEKP 104 (115)
T ss_dssp EEEE----TTEECCEEEEEECCS
T ss_pred EEEE----CCeeEEEEEEEECCC
Confidence 9994 544 34566666433
No 143
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=88.53 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=56.0
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeeccc-CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVK-DLRIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~-~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
+|.|+..|.+ .. +..+.|.|.+.|.|.|.++|++ ++..+.... .......+++|.|.++..+ |+|.|+|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C 74 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTISDNRFAMLANNNLQILNINKS------DEGIYRC 74 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTSCEEETTCCGG------GCEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEE-CCccceeccCCeEEEecCCCEEEeeCCHh------HCcEEEE
Confidence 5778888877 22 2339999999999999999985 666654322 2335566789999988765 8999999
Q ss_pred EEEcCCCce
Q psy5697 122 RASNEAGVI 130 (145)
Q Consensus 122 ~A~N~~G~~ 130 (145)
.|.|..+..
T Consensus 75 ~~~~~~~~~ 83 (189)
T 2v5t_A 75 EGRVEARGE 83 (189)
T ss_dssp EEEETTTTE
T ss_pred EEEEcCCCc
Confidence 999998654
No 144
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.33 E-value=3e-12 Score=99.31 Aligned_cols=109 Identities=16% Similarity=0.090 Sum_probs=70.8
Q ss_pred ecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC--CCcc--CeEEEeeEeccCCCE-EEEEccCCeEe
Q psy5697 11 ADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG--GNRT--RGLELTRQTRYEPSQ-LGWRFSNNTVI 85 (145)
Q Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~--~~~~--g~~L~C~a~G~P~P~-i~W~~~dg~~i 85 (145)
.|++.|.|...+..... ..........+|.+...+.. .... .+.|.|.+.|+|.|. |+|++ +|..+
T Consensus 204 ~d~G~Y~C~a~n~~~~~--------~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~-~~~~~ 274 (331)
T 3u83_A 204 AHQQSLACIVNYHMDRF--------KESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTT-LNGSL 274 (331)
T ss_dssp GTTCEEEEEEEETTEEE--------EEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred cCCCEEEEEEecCCCcc--------eeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEE-CCCcc
Confidence 56677777765432221 11112333456665544433 2233 399999999999998 99985 66665
Q ss_pred ecccCceEEeeCCcEEEc-CCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 86 AYVKDLRIALSNGSLMFP-PFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~-~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
... ....+++|.|. ++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 275 ~~~----~~~~~~~L~i~~~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 275 PKG----VEAQNRTLFFKGPINYS------LAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp CTT----EEEETTEEEECSCCCGG------GCEEEEEEEEETTEEEEEEEEECCB
T ss_pred ccc----ceecCcEEEEeCCCccc------cCeEEEEEEEeccccceEEEEEEEe
Confidence 321 33467899998 77655 8999999999999997 33344444
No 145
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.33 E-value=5.4e-12 Score=96.80 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=55.0
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEe--eCCcEEEcC-CCCCCCCCCCCCeEEEEEEEcCCCce-EEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIAL--SNGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~--~~GsL~i~~-~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v 135 (145)
.+.|.|.+.|.|.|.|+|++ +|..+.......... ..++|.|.+ +..+ |+|.|+|.|+|.+|.. .+..+
T Consensus 121 ~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~------d~G~Y~C~a~N~~G~~~~~~~l 193 (305)
T 2nzi_A 121 VVSIKIPFSGKPDPVITWQK-GQDLIDNNGHYQVIVTRSFTSLVFPNGVERK------DAGFYVVCAKNRFGIDQKTVEL 193 (305)
T ss_dssp CEEEEEEEEEESCCEEEEEE-SSSBCCSSSSCEEEECSSEEEEEETTCCCST------TCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEECCCCCCEEEEEE-CCEECCCCCcEEEEEcCCceEEEEecCCccC------ccEEEEEEEEeCCCceeeEEEE
Confidence 38999999999999999985 777765433332222 234799987 7654 8999999999999997 44456
Q ss_pred EEEecc
Q psy5697 136 HVKADS 141 (145)
Q Consensus 136 ~v~~~~ 141 (145)
.|...+
T Consensus 194 ~v~~~P 199 (305)
T 2nzi_A 194 DVADVP 199 (305)
T ss_dssp EEEBCC
T ss_pred EEecCC
Confidence 665433
No 146
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.33 E-value=1.8e-12 Score=92.63 Aligned_cols=86 Identities=14% Similarity=0.174 Sum_probs=57.1
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEee----CCcEEEcCCCCCCCCCCCCCeE
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~ 118 (145)
+|.|+..|++ .. +..+.|.|.+.|.|.|.|+|++ ||..+........... +++|.|.++..+ |+|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~ 74 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQNLDQLYIPVSEQHWIGFLSLKSVERS------DAGR 74 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCSSEEEEEEEETTEEEEEEEESSCCGG------GCEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCCCCceEEEecCCCceEEEEEeecCcc------cCeE
Confidence 4566666665 22 2339999999999999999985 7877754322222222 258999888655 8999
Q ss_pred EEEEEEcCCCceEEE--EEEEE
Q psy5697 119 YRCRASNEAGVILSR--FVHVK 138 (145)
Q Consensus 119 Y~C~A~N~~G~~~s~--~v~v~ 138 (145)
|+|.|.|..|...+. .+.|.
T Consensus 75 Y~C~~~~~~~~~~~~~~~l~V~ 96 (182)
T 1rhf_A 75 YWCQVEDGGETEISQPVWLTVE 96 (182)
T ss_dssp EEEEESSCTTCEECCCEEEEEE
T ss_pred EEEEEEcCCCcEEEEEEEEEEe
Confidence 999999998876544 44443
No 147
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.32 E-value=9e-12 Score=81.58 Aligned_cols=69 Identities=10% Similarity=0.109 Sum_probs=49.7
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCeEE
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~Y 119 (145)
.|.|++.|.+ .. +..+.|.|.+ |.|.|.|+|+ +||..+........ ..+| +|.|.++..+ |+|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~-k~~~~l~~~~~~~~-~~~~~~~~L~I~~v~~~------D~G~Y 78 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQ-RGGSDISASNKYGL-ATEGTRHTLTVREVGPA------DQGSY 78 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEE-CSSSEECSSTTCEE-EEETTEEEEEESSCCTT------CCSEE
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEE-ECCEECCCCCcEEE-EEcCCEEEEEEcCCCcc------cCEEE
Confidence 3566666665 22 2339999999 8999999998 47887765443333 3333 6999888765 89999
Q ss_pred EEEE
Q psy5697 120 RCRA 123 (145)
Q Consensus 120 ~C~A 123 (145)
+|.|
T Consensus 79 ~C~a 82 (95)
T 2k1m_A 79 AVIA 82 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 148
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.32 E-value=6e-12 Score=91.27 Aligned_cols=56 Identities=7% Similarity=-0.005 Sum_probs=43.0
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 132 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s 132 (145)
+.|.|.+.|.|+|+|+|++ ||+++..... +.|..+..+ |+|.|+|.|+|.+|...+
T Consensus 113 v~L~C~~~g~p~p~i~W~~-~g~~l~~~~~---------~~i~~~~~~------d~G~Y~C~a~N~~g~~~~ 168 (176)
T 1hng_A 113 ATLTCEVLEGTDVELKLYQ-GKEHLRSLRQ---------KTMSYQWTN------LRAPFKCKAVNRVSQESE 168 (176)
T ss_dssp TEEEEECSSCSSCEEEEEE-TTEEEEEESS---------SEEEEECSC------CSSCEEEEEEETTEEEEE
T ss_pred EEEEEEecCCCCcEEEEEE-CCEECCCCCc---------EEEEEEEcc------CCeEEEEEEEecCCCcee
Confidence 8999999999999999985 8887754322 223333333 899999999999998744
No 149
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.32 E-value=2.1e-12 Score=99.05 Aligned_cols=80 Identities=10% Similarity=0.108 Sum_probs=56.4
Q ss_pred CCCEEEEcCCCCCccC--eEEEeeEeccCCC-EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 45 HYPFRIKSAPGGNRTR--GLELTRQTRYEPS-QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 45 ~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P-~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+|.|+.........| +.|.|.+.|.|+| .|+|++ ||..+............++|.|.++..+ |+|.|+|
T Consensus 221 ~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~g~~~~~~~~~~~~~~~~~L~I~~v~~~------d~G~Y~C 293 (312)
T 2y23_A 221 QGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHDFKDGICTLLITEFSKK------DAGIYEV 293 (312)
T ss_dssp HSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEE-TTEEEEEECCC----CEEEEEECSCSGG------GCEEEEE
T ss_pred cCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEee-CCEECCCCCcEEEECCEEEEEECcCCHH------HCEEEEE
Confidence 3466664433222233 8999999999998 999985 8888764332222222248999888765 8999999
Q ss_pred EEEcCCCceE
Q psy5697 122 RASNEAGVIL 131 (145)
Q Consensus 122 ~A~N~~G~~~ 131 (145)
.|+|.+|...
T Consensus 294 ~a~N~~G~~~ 303 (312)
T 2y23_A 294 ILKDDRGKDK 303 (312)
T ss_dssp EEESTTCCEE
T ss_pred EEEcCCCcee
Confidence 9999999983
No 150
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.32 E-value=2.2e-11 Score=87.51 Aligned_cols=68 Identities=9% Similarity=-0.015 Sum_probs=53.9
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.+.|.|.+.|.|.|+|+|++ +|..+ ...+++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|.
T Consensus 114 ~~~l~C~~~~~p~~~v~W~~-~~~~~--------~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 114 SLTLTLESPPGSSPSVQCRS-PRGKN--------IQGGKTLSVSQLELQ------DSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp CEEEEEECCTTCCCEEEEEC-TTSCE--------EEESSEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEcCCCCCCEEEEEe-CCCcc--------ccCceEEEEecCCcC------CCeEEEEEEEECCceEEEEEEEEEE
Confidence 38999999999999999985 55432 235789999988765 8999999999999987 55577776
Q ss_pred eccC
Q psy5697 139 ADSR 142 (145)
Q Consensus 139 ~~~~ 142 (145)
..++
T Consensus 179 ~~p~ 182 (184)
T 2ny1_B 179 AFQK 182 (184)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 5544
No 151
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.32 E-value=3.7e-12 Score=85.64 Aligned_cols=77 Identities=14% Similarity=0.114 Sum_probs=56.1
Q ss_pred CCCCCCCEEEEcCCC--CCccC--eEEEeeEeccCCCEEEEEccCCeEeecc-cCceEEeeCC---cEEEcCCCCCCCCC
Q psy5697 41 SENEHYPFRIKSAPG--GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYV-KDLRIALSNG---SLMFPPFPETGFRP 112 (145)
Q Consensus 41 ~~~~~~P~~i~~p~~--~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~-~~~~~~~~~G---sL~i~~~~~~~~~~ 112 (145)
.....+|.|++.+++ ....| +.|.|.+ +.|.|.|+|++ ||..+... ... .+..+| +|.|.++..+
T Consensus 10 ~~~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k-~g~~l~~~~~~~-~~~~~~~~~~L~I~~v~~~---- 82 (104)
T 1pd6_A 10 MDEKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLK-NGQEIQMSGSKY-IFESIGAKRTLTISQCSLA---- 82 (104)
T ss_dssp -CCSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEE-SSSEECCCSSSS-EEEEETTEEEEEECSCSSS----
T ss_pred CCccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEE-CCEECCCCCCeE-EEEecCCEEEEEECCCCcc----
Confidence 445667888887776 23333 9999999 89999999985 88887654 333 334455 8999888765
Q ss_pred CCCCeEEEEEEEcC
Q psy5697 113 DVHSTVYRCRASNE 126 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~ 126 (145)
|+|.|+|.|.|.
T Consensus 83 --D~G~Y~C~a~~~ 94 (104)
T 1pd6_A 83 --DDAAYQCVVGGE 94 (104)
T ss_dssp --SCEEEEEEETTE
T ss_pred --cCEEEEEEECCC
Confidence 899999999553
No 152
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.32 E-value=1.2e-11 Score=89.87 Aligned_cols=91 Identities=18% Similarity=0.176 Sum_probs=64.0
Q ss_pred CCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeeccc----CceEEeeCCcEEEcCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVK----DLRIALSNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~----~~~~~~~~GsL~i~~~~~~~~~~~~d 115 (145)
...+|.|+..|.+ .. +..+.|.|.+.|+|.|.|+|++ +|..+.... ..+....+|.+.+..+..... ...|
T Consensus 6 ~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d 83 (212)
T 2v9r_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRK-SRPD 83 (212)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCTTCSEEECTTSCEEESSCCCCSS-CCCS
T ss_pred ccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEeeccccccccceEEecCCcEEEEEEEecCC-Cccc
Confidence 3457888888877 22 3339999999999999999985 777765322 124556778887766532221 2238
Q ss_pred CeEEEEEEEcCCCceEEEEE
Q psy5697 116 STVYRCRASNEAGVILSRFV 135 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s~~v 135 (145)
+|.|+|.|.|..|...+..+
T Consensus 84 ~G~Y~C~~~n~~g~~~~~~~ 103 (212)
T 2v9r_A 84 EGVYVCVARNYLGEAVSHDA 103 (212)
T ss_dssp CEEEEEEEEETTEEEECCCE
T ss_pred CeEEEEEEECCCCceeecce
Confidence 99999999999998754433
No 153
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.31 E-value=3.6e-12 Score=95.67 Aligned_cols=124 Identities=13% Similarity=0.027 Sum_probs=74.9
Q ss_pred eeceee-eecCceeEeeccccCc--ccCCceeeeEEEeccCCCCCCCEEEEcCCCCCcc--CeEEEeeEeccCCCEEEEE
Q psy5697 4 FHISTL-LADADTYIIADRSLFP--RPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRT--RGLELTRQTRYEPSQLGWR 78 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~--g~~L~C~a~G~P~P~i~W~ 78 (145)
|.|..+ ..|++.|.|...+..- .....+. ..+ .....+|.+...|...+.. .++|.|.+.+.|.|++.|+
T Consensus 66 L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~--l~V---~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~ 140 (218)
T 1uct_A 66 FVIDHMDANKAGRYQCQYRIGHYRFRYSDTLE--LVV---TGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLA 140 (218)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCCEE--EEE---ECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEE
T ss_pred EEEcccccccCEEEEEEEEcCCCceeecCCEE--EEE---cCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEE
Confidence 344444 6788888888755321 1111111 011 1112467777666443333 3999998888899999998
Q ss_pred ccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC----ceEEEEEEEEecc
Q psy5697 79 FSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG----VILSRFVHVKADS 141 (145)
Q Consensus 79 ~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G----~~~s~~v~v~~~~ 141 (145)
| ||..+.. .......+++|.|.++..+ |+|.|+|.|+|..+ +..|..+.|....
T Consensus 141 k-~g~~~~~--~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 141 K-EGELSLP--QHQSGEHPANFSLGPVDLN------VSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp E-TTCSSCC--SEEECSSSEEEECCSCCGG------GCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred E-CCCcccc--cccCCCccCEEEEccCCcc------cCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 4 7766532 1122234668999988765 89999999999743 2345555555433
No 154
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.31 E-value=2.4e-12 Score=93.18 Aligned_cols=73 Identities=23% Similarity=0.395 Sum_probs=54.4
Q ss_pred CeEEEeeE-eccCCCEEEEEccCCeEeecccCc-------e--EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 60 RGLELTRQ-TRYEPSQLGWRFSNNTVIAYVKDL-------R--IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 60 g~~L~C~a-~G~P~P~i~W~~~dg~~i~~~~~~-------~--~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.+.|.|.+ .|+|.|.|+|++ +|..+...... + ....+++|.|.++..+ |+|.|+|.|+|.+|.
T Consensus 124 ~~~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~ 196 (209)
T 1nbq_A 124 RAVLTCSEQDGSPPSEYTWFK-DGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSAS------DTGEYSCEARNGYGT 196 (209)
T ss_dssp CEEECCCCCSCBSCCEEEEEE-TTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGG------GCCCEEEEEECSSSC
T ss_pred EEEEEEeCCCCCCCceeEEEE-CCeeCCCccccceeeeccceEEcCCcceEEEEecccc------CCeEEEEEEeCCcCc
Confidence 38999997 999999999985 77766532211 1 1124568999887655 899999999999999
Q ss_pred e-EEEEEEEEe
Q psy5697 130 I-LSRFVHVKA 139 (145)
Q Consensus 130 ~-~s~~v~v~~ 139 (145)
. .+..++|..
T Consensus 197 ~~~s~~v~l~V 207 (209)
T 1nbq_A 197 PMTSNAVRMEA 207 (209)
T ss_dssp CEECCCBCCEE
T ss_pred ccccccEEEEE
Confidence 8 666655543
No 155
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=6.6e-12 Score=83.03 Aligned_cols=87 Identities=11% Similarity=0.142 Sum_probs=61.3
Q ss_pred CCCCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~ 116 (145)
.+.+|.|+..|.+ ....| +.|.|. .|.|.|.|+|++ ||..+...... .+..+| +|.|.++..+ |+
T Consensus 5 ~~~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k-~~~~l~~~~~~-~~~~~~~~~~L~I~~v~~~------D~ 75 (103)
T 2dku_A 5 SSGANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRK-GLLELRASGKH-QPSQEGLTLRLTISALEKA------DS 75 (103)
T ss_dssp SCCCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEE-SSCBCCSSSSE-EEEEETTEEEEEEESCCTT------TC
T ss_pred CCCCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEe-CCEECCCCCeE-EEEeCCCEEEEEECCCCcc------cC
Confidence 3456777777776 23333 899999 599999999974 77777644333 333455 8999988765 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEeccC
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKADSR 142 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~~~~ 142 (145)
|.|+|. +|.. .+..+.|...+.
T Consensus 76 G~Y~C~----~g~~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 76 DTYTCD----IGQAQSRAQLLVQGRRS 98 (103)
T ss_dssp SEEEEE----CSSCBCCEEEEEECSCC
T ss_pred EEEEEE----eCCceEEEEEEEeCccC
Confidence 999998 6665 455677765443
No 156
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.31 E-value=1.4e-11 Score=93.73 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=62.4
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccC-CCEEEEEccCCeEeecccCceEEe----eCCcEEEcCCCCCCCCCCCCCe
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYE-PSQLGWRFSNNTVIAYVKDLRIAL----SNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P-~P~i~W~~~dg~~i~~~~~~~~~~----~~GsL~i~~~~~~~~~~~~d~G 117 (145)
+|.+...|++ .. +..+.|.|.+.|.| .|.|+|++.||..+.......... .+++|.|.++..+ |+|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G 75 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANID------DAG 75 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGG------GCE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCC------CCE
Confidence 4566777776 22 33499999999998 699999876887775432222222 2348999888655 899
Q ss_pred EEEEEEEcCCCceEEEEEEEE
Q psy5697 118 VYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.|+|.|.|..|...+..+.|.
T Consensus 76 ~Y~C~~~n~~g~~~~~~~~l~ 96 (291)
T 1qz1_A 76 IYKCVVTAEDGTQSEATVNVK 96 (291)
T ss_dssp EEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEEEEcCCCCeeEEEEEEE
Confidence 999999999987666655554
No 157
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.31 E-value=1.7e-12 Score=102.84 Aligned_cols=86 Identities=17% Similarity=0.256 Sum_probs=64.3
Q ss_pred CCCCCEEEEcCCC-CC--ccCeEEEeeEec-cCCCEEEEEccCCeEeeccc-CceEEeeCCcEEEcCCCCCCCCCCCCCe
Q psy5697 43 NEHYPFRIKSAPG-GN--RTRGLELTRQTR-YEPSQLGWRFSNNTVIAYVK-DLRIALSNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~--~~g~~L~C~a~G-~P~P~i~W~~~dg~~i~~~~-~~~~~~~~GsL~i~~~~~~~~~~~~d~G 117 (145)
...+|.|...|.+ .. +..+.|.|.+.| .|.|+|+|++ ||..+.... .......+|+|.|.++..+ |+|
T Consensus 3 v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G 75 (395)
T 1bih_A 3 VDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKK-DGKSYNWQEHNAALRKDEGSLVFLRPQAS------DEG 75 (395)
T ss_dssp --CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEE-SSSBCCTTTTTEEECTTSCCEEESSCCGG------GCE
T ss_pred cCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEE-CCcCcccccceEEEecCCceEEEecCCCC------CCc
Confidence 3567888888876 22 233999999999 9999999985 787776433 2234456789999988655 899
Q ss_pred EEEEEEEcCCCceEEEEE
Q psy5697 118 VYRCRASNEAGVILSRFV 135 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v 135 (145)
.|+|.|.|..|...++.+
T Consensus 76 ~Y~C~a~n~~g~~~s~~~ 93 (395)
T 1bih_A 76 HYQCFAETPAGVASSRVI 93 (395)
T ss_dssp EEEEEEEETTEEEECCCE
T ss_pred EEEEEEEeCCCeEEeEEE
Confidence 999999999998765433
No 158
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.31 E-value=2.3e-11 Score=86.02 Aligned_cols=106 Identities=9% Similarity=0.029 Sum_probs=68.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC--ccCeEEEeeE-eccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN--RTRGLELTRQ-TRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a-~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+..... .+. + ....+|.++..|.... +..+.|.|.+ .|.|.|.|+|++ ||..+.
T Consensus 60 ~~d~G~Y~C~~~~~~~s~--~~~---l-----~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (170)
T 3ry4_A 60 NNDSGEYTCQTGQTSLSD--PVH---L-----TVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ-NGKSQK 128 (170)
T ss_dssp GGGCEEEEEEETTSBCCC--CEE---E-----EEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEE-TTEEEE
T ss_pred cccCeEEEEEEeCCCceE--eEE---E-----EEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEE-CCeEcc
Confidence 567778888775421111 111 0 1112344555544322 2338999999 566779999985 877754
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
. ...+++|.|.++..+ |+|.|+|.|.|..|...|..+.|.
T Consensus 129 ~------~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s~~~~l~ 168 (170)
T 3ry4_A 129 F------SHLDPTFSIPQANHS------HSGDYHCTGNIGYTLFSSKPVTIT 168 (170)
T ss_dssp E------ESSCCEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEE
T ss_pred c------cCCCCeEEEEecccc------CCEEEEEEEEeCcCccccccEEEE
Confidence 2 224668999887655 899999999999998766666554
No 159
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.30 E-value=1.5e-11 Score=88.67 Aligned_cols=63 Identities=8% Similarity=0.075 Sum_probs=45.7
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCce---EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLR---IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~---~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+.+.|.+.|.|+|+|+|++ +|..+....... .....++|.|.++... |.|.|+|.|+|++|..
T Consensus 136 ~~~~c~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~YtC~a~N~~g~~ 201 (218)
T 4frw_A 136 LAASCTAEGSPAPSVTWDT-EVKGTTSSRSFKHSRSAAVTSEFHLVPSRSM------NGQPLTCVVSHPGLLQ 201 (218)
T ss_dssp EEEEEEEEEBSCCEEEEEE-SSCCEEEEEEEECSSSEEEEEEEEECCCGGG------TTCEEEEEEECTTCSS
T ss_pred cceeeeccCCcCceEEEEE-CCcccccCceEecCCcEEEEEEEEEeeCCHH------hCeEEEEEEEeCCCCe
Confidence 8999999999999999985 665554321100 0111236888876544 8999999999999986
No 160
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.30 E-value=1.3e-11 Score=90.50 Aligned_cols=72 Identities=8% Similarity=0.071 Sum_probs=46.7
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCc-eEEeeCCcEEEc---CCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDL-RIALSNGSLMFP---PFPETGFRPDVHSTVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~-~~~~~~GsL~i~---~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v 135 (145)
+.|.|.+.|+|.|.|+|++.+|..+...... .....+|.+.+. .+..+ |.|.|+|.|+|.+|.. .+..+
T Consensus 134 v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~------d~g~Y~C~a~n~~g~~~~~~~l 207 (222)
T 3sbw_C 134 HELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTT------TNEIFYCTFRRLDPEENHTAEL 207 (222)
T ss_dssp EEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECC------TTCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEecc------CCcEEEEEEEeCccceeeEEEE
Confidence 8999999999999999986557766432211 111234433332 22222 7999999999999987 44455
Q ss_pred EEE
Q psy5697 136 HVK 138 (145)
Q Consensus 136 ~v~ 138 (145)
.|.
T Consensus 208 ~v~ 210 (222)
T 3sbw_C 208 VIP 210 (222)
T ss_dssp ECC
T ss_pred Eec
Confidence 555
No 161
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.30 E-value=3.4e-11 Score=101.89 Aligned_cols=107 Identities=17% Similarity=0.111 Sum_probs=70.1
Q ss_pred eecCceeEeeccccCcccCC-ceeeeEEEeccCCCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLG-YLVGNIVYSSRSENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+......+ .+.-. |. ..|+.++..|.+ .... .+.|.|.+.|+|+|+|+|+ +||..+
T Consensus 529 ~~d~G~Y~C~a~n~~g~~~s~~~~l~-V~------~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~-~~g~~i 600 (642)
T 1e07_A 529 RNDARAYVCGIQNSVSANRSDPVTLD-VL------YGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWR-INGIPQ 600 (642)
T ss_pred hhcCceEEEEeEcCCCCccCCCEEEE-EE------eCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEE-ECCEEC
Confidence 45677777776554332211 11100 11 123344555554 2222 3899999999999999997 588775
Q ss_pred ecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 86 AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
. .+++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|+.
T Consensus 601 ~---------~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 601 Q---------HTQVLFIAKITPN------NNGTYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred c---------cCceEEECccccc------CCeEEEEEEEecccCcceeEEEEEEE
Confidence 3 2457999877655 8999999999999998 566676653
No 162
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.29 E-value=3.6e-11 Score=87.34 Aligned_cols=110 Identities=9% Similarity=0.005 Sum_probs=61.7
Q ss_pred eecCceeEeeccccCcccCCc---eeeeEEEeccCCCCCCCEEEEcCCCCCccCeEEEeeEe-ccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGY---LVGNIVYSSRSENEHYPFRIKSAPGGNRTRGLELTRQT-RYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g~~L~C~a~-G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+........ ..-...+. .....|.+...... .+..+.|.|.+. |+|.|+|+|++ ||..+
T Consensus 74 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~---~~~~~p~~~~~~~~-~g~~~~l~C~~~~g~P~p~i~W~k-~g~~l 148 (201)
T 1dr9_A 74 PSDEGTYECVVLKYEKDAFKREHLAEVTLSVK---ADFPTPSISDFEIP-TSNIRRIICSTSGGFPEPHLSWLE-NGEEL 148 (201)
T ss_dssp GGGCEEEEEEEEECCTTSCEEEEEEEEEEEEE---CCCCCCEEEEEECS-STTEEEEEEEEEEESSCEEEEEEE-SSCEE
T ss_pred chhCeEEEEEEEcCCCCccccccccEEEEEEc---CCCCCCceEeccCC-CCCeEEEEEecCCccCCCEEEEEE-CCEEC
Confidence 678888988876643322110 01010111 11123544332111 122379999995 99999999985 78887
Q ss_pred ecccCceEEeeC-CcEEE---cCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 86 AYVKDLRIALSN-GSLMF---PPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 86 ~~~~~~~~~~~~-GsL~i---~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
...........+ |.+.+ ..+..+ |+|.|+|.|+|..|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~v~~~------d~g~Y~C~a~n~~~~~ 191 (201)
T 1dr9_A 149 NAINTTVSQDPETELYAVSSKLDFNMT------TNHSFMCLIKYGHLRV 191 (201)
T ss_dssp CCSEEEEEECTTTCCEEEEEEEEEETT------SCEEEEEEEEETTCCE
T ss_pred ccccceEEecCCCcEEEEEEEEEEEec------CCCEEEEEEecCccee
Confidence 643222222233 33222 222222 8999999999999986
No 163
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.29 E-value=8.5e-12 Score=103.20 Aligned_cols=114 Identities=12% Similarity=-0.000 Sum_probs=73.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC----CC--ccCeEEEeeEeccCCCE-EEEEccCC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG----GN--RTRGLELTRQTRYEPSQ-LGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~----~~--~~g~~L~C~a~G~P~P~-i~W~~~dg 82 (145)
..|++.|.|...+....... ........+|.+...|.. .. +..+.|.|.+.|+|.|. |+|+ +||
T Consensus 282 ~~D~G~Y~C~a~n~~g~~~~--------~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~-k~g 352 (524)
T 2ec8_A 282 VNDSGVFMCYANNTFGSANV--------TTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWI-YMN 352 (524)
T ss_dssp TTTCEEEEEEEECSSCEEEE--------EEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEE-SSS
T ss_pred HHHCEEEEEEEEecCCceEE--------EEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEE-ECC
Confidence 46777888877554333211 111222356766665542 12 23399999999999999 9998 477
Q ss_pred eEeecccCceEEeeC-------CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 83 TVIAYVKDLRIALSN-------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 83 ~~i~~~~~~~~~~~~-------GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
..+...........+ ++|.|.++..+ |+|.|+|.|+|..|.. .+..+.|.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~~~~~l~V~ 410 (524)
T 2ec8_A 353 RTFTDKWEDYPKSENESNIRYVSELHLTRLKGT------EGGTYTFLVSNSDVNAAIAFNVYVN 410 (524)
T ss_dssp CBCSSSBCCEESCCSSSCCEEEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred eeccCCccceeEEccCCCceeEEEEEEeecCcc------cCeEEEEEEEecCceEEEEEEEEEe
Confidence 777644322222222 37999887655 8999999999999996 34455554
No 164
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.29 E-value=9.8e-12 Score=89.64 Aligned_cols=84 Identities=15% Similarity=0.001 Sum_probs=59.5
Q ss_pred CCCEEEEcCCCCC---ccCeEEEeeEeccCC--CEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 45 HYPFRIKSAPGGN---RTRGLELTRQTRYEP--SQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 45 ~~P~~i~~p~~~~---~~g~~L~C~a~G~P~--P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
.+|.+...+.... +..+.|.|.+.|.|. |.|+|+ ++|..+.... ....+++|.|.++..+ |+|.|
T Consensus 2 ~~P~i~~~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~-~~~~~~~~~~---~~~~~~~L~i~~~~~~------d~G~Y 71 (190)
T 2wv3_A 2 NEPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWT-KNGVELTATR---KNASNMEYRINKPRAE------DSGEY 71 (190)
T ss_dssp -CCEEEECCCEECCCSSSCEEEEEEEEECSSCEEEEEEE-ETTEECTTCC---BCCSEEEEEESSCCGG------GCEEE
T ss_pred CCCcccccceEEEccCCceEEEEEEeccCCCCceEEEEE-ECCEECcccc---eEeccEEEEEecCCcc------cCEEE
Confidence 3677777554432 233999999999998 899997 4788775432 1225578999888665 89999
Q ss_pred EEEEEcCCCce-EEEEEEEEe
Q psy5697 120 RCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 120 ~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+|.|.|. |.. .+..+.|..
T Consensus 72 ~C~~~n~-~~~~~~~~l~V~~ 91 (190)
T 2wv3_A 72 HCVYHFV-SAPKANATIEVKA 91 (190)
T ss_dssp EEEEEET-TEEEEEEEEEEEC
T ss_pred EEEEEeC-CcccccEEEEEec
Confidence 9999999 765 444555553
No 165
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.29 E-value=4.8e-12 Score=83.69 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=58.7
Q ss_pred CCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCc---EEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGS---LMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~Gs---L~i~~~~~~~~~~~~d~ 116 (145)
...+|.|+..|.+ .... .+.|.|.+.|.|.| |+|++ ||..+.... ...+..+|. |.|.++..+ |+
T Consensus 5 ~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~~~~-~~~~~~~~~~~~L~I~~v~~~------D~ 75 (103)
T 2e7b_A 5 SSGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLRPGD-KYSLRQEGAMLELVVRNLRPQ------DS 75 (103)
T ss_dssp CCCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCCCSS-SEEEEECSSEEEEEECSCCTT------TC
T ss_pred CCCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECCCCC-cEEEEEcCCEEEEEEccCCcc------cC
Confidence 3556777777766 2223 39999999999999 99985 777765433 234445664 999988765 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|.|+|. +|.. .+..+.|..
T Consensus 76 G~Y~C~----~g~~~~~~~l~V~~ 95 (103)
T 2e7b_A 76 GRYSCS----FGDQTTSATLTVTA 95 (103)
T ss_dssp CCEEEE----CSSCBCCBCEEEEC
T ss_pred EEEEEE----ECCcEEEEEEEEEe
Confidence 999998 4544 344566664
No 166
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.28 E-value=3.3e-11 Score=93.86 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=58.3
Q ss_pred CCCCCCEEEEcCCCC-CccCeEEEeeEeccCCC--EEEEEccCCeEeecccCc-eEEeeCCc------EEEcCCCCCCCC
Q psy5697 42 ENEHYPFRIKSAPGG-NRTRGLELTRQTRYEPS--QLGWRFSNNTVIAYVKDL-RIALSNGS------LMFPPFPETGFR 111 (145)
Q Consensus 42 ~~~~~P~~i~~p~~~-~~~g~~L~C~a~G~P~P--~i~W~~~dg~~i~~~~~~-~~~~~~Gs------L~i~~~~~~~~~ 111 (145)
....+|.+...+... .+..+.|.|.+.|.|+| +|+|+ +||+.+...... .....+|+ |.|.++..+
T Consensus 218 ~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~-k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~--- 293 (327)
T 2wng_A 218 TIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWL-ENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHR--- 293 (327)
T ss_dssp TBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEEE-ETTEEEEEEECCSCEECTTSCEEEEEEEEC---------
T ss_pred ccCCCCEEEEecCCcCCCCcEEEEEEEccccCCCcEEEEE-ECCeEccCcccCceEECCCCcEEEEEEEEEcccccc---
Confidence 345678776665542 23348999999996544 89997 588887642211 23344554 556554433
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy5697 112 PDVHSTVYRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 112 ~~~d~G~Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
|+|.|+|.|+|+.|...++.+.+++
T Consensus 294 ---d~G~Y~C~a~N~~~~~~s~~~~~~~ 318 (327)
T 2wng_A 294 ---DDVKLTCQVEHDGQPAVSKSHDLKV 318 (327)
T ss_dssp ----CCEEEEEEEETTCCCEEEEEECC-
T ss_pred ---CCCEEEEEEEeCCCCCchhheEEEe
Confidence 8999999999999999888777664
No 167
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.28 E-value=1.4e-11 Score=91.11 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=50.3
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceE-EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~-~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+.|.|.+.|.|.|.|+|++..+.++. +... ...+++|.|.++..+ |+|.|+|.|.|..|.. ....+.|.
T Consensus 19 v~L~C~~~g~P~p~i~W~~~~~~~~~---~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~l~V~ 89 (202)
T 1vca_A 19 VSLTCSTTGCESPFFSWRTQIDSPLN---GKVTNEGTTSTLTMNPVSFG------NEHSYLCTATCESRKLEKGIQVEIY 89 (202)
T ss_dssp EEEEEEEESCSSCEEEEEETTCCCCS---SEEEEETTEEEEEESSCCGG------GCSEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeecCCCCCeEEEECCCCCCcc---ceEEEcCCccEEEECcCCHH------HCEEEEEEEEECCceEeeEEEEEEE
Confidence 99999999999999999863333321 1111 122347999888655 8999999999999875 33355555
Q ss_pred ecc
Q psy5697 139 ADS 141 (145)
Q Consensus 139 ~~~ 141 (145)
..+
T Consensus 90 ~~p 92 (202)
T 1vca_A 90 SFP 92 (202)
T ss_dssp BCC
T ss_pred eCC
Confidence 433
No 168
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.28 E-value=4e-11 Score=80.55 Aligned_cols=81 Identities=11% Similarity=0.113 Sum_probs=57.0
Q ss_pred CCCEEEEcCCCC-Ccc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCeE
Q psy5697 45 HYPFRIKSAPGG-NRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 45 ~~P~~i~~p~~~-~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~ 118 (145)
.+|.|...|.+. ... .+.|.|.+.|. |.|+|++ ||..+....+ ..+..+| +|.|.++..+ |+|.
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~l~~~~~-~~~~~~~~~~~L~I~~v~~~------D~G~ 87 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWK-GHETLRDGDR-HSLRQDGARCELQIRGLVAE------DAGE 87 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEE-SSSBCCCSSS-EEEEEETTEEEEEECSCCST------TCEE
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEE-CCEECCCCCc-EEEEECCCEEEEEECCCChh------hCEE
Confidence 457888888772 233 39999999885 7899985 7777764433 3444455 7999988765 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEEe
Q psy5697 119 YRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|+|.| |.. .+..+.|..
T Consensus 88 Y~C~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 88 YLCMC----GKERTSAMLTVRA 105 (113)
T ss_dssp EEEEE----TTEEEEEEEEECC
T ss_pred EEEEe----CCCCEEEEEEEeC
Confidence 99999 544 344555553
No 169
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.27 E-value=9.1e-12 Score=90.27 Aligned_cols=120 Identities=13% Similarity=-0.012 Sum_probs=73.9
Q ss_pred eeceee-eecCceeEeeccccCccc--CCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEE
Q psy5697 4 FHISTL-LADADTYIIADRSLFPRP--LGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWR 78 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~ 78 (145)
|.|..+ ..|++.|.|...+..... ...+. ..+ .....+|.+...|......| +.|.|.+.|.| |.++|+
T Consensus 54 L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~--l~V---~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~-~~~~w~ 127 (184)
T 2gi7_A 54 LFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLE--LVA---TGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGF-DQFALY 127 (184)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEBCCCCCEE--EEE---ESSSCCCEEEEECCCSSCCTTCEEEEEECSSCC-CEEEEE
T ss_pred EEECcCChhhCceEEEEEEcCCCccCCCCCEE--EEe---cCcCCCCEEEeCCCceecCCCcEEEEEEcCCCC-cEEEEE
Confidence 344444 678899999876543211 11111 111 11234677777774433333 99999998755 799998
Q ss_pred ccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce----EEEEEEEE
Q psy5697 79 FSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI----LSRFVHVK 138 (145)
Q Consensus 79 ~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~----~s~~v~v~ 138 (145)
+ ||..+... ......+++|.|.++..+ |+|.|+|.|.|..+.. .|..+.|.
T Consensus 128 k-~g~~~~~~--~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 182 (184)
T 2gi7_A 128 K-EGDPAPYK--NPERWYRASFPIITVTAA------HSGTYRCYSFSSRDPYLWSAPSDPLELV 182 (184)
T ss_dssp E-CCCCTTSC--CCCEEEEESSSEEEETTC------CSEEEEEEEECTTSTTBCCCCCCCEEEE
T ss_pred E-CCCcCcce--ecCCCceEEEEEccCCcc------CCeEEEEEEEeCCCCcccCCCCCcEEEE
Confidence 5 77665421 122334668899888765 8999999999987632 34455543
No 170
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.27 E-value=1.3e-11 Score=82.25 Aligned_cols=84 Identities=11% Similarity=0.115 Sum_probs=56.9
Q ss_pred CCCCCEEEEcCCCC-Ccc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCc---EEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPGG-NRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGS---LMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p~~~-~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~Gs---L~i~~~~~~~~~~~~d~ 116 (145)
...+|.|+..|.+. ... .+.|.|.+.|. |.|+|++ +|..+....+. .+..+|. |.|.++..+ |+
T Consensus 5 ~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~~~~~~~~-~~~~~~~~~~L~I~~v~~~------D~ 74 (108)
T 2dm7_A 5 SSGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKK-GPETLRDGGRY-SLKQDGTRCELQIHDLSVA------DA 74 (108)
T ss_dssp SCCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEES-SSSBCCSSSSC-EEEEETTEEEEEESSCCTT------TC
T ss_pred cCCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEE-CCEECCCCCCE-EEEecCCEEEEEECCCCcc------cC
Confidence 45678887777662 223 39999999886 7899985 77776543333 3344554 999988765 89
Q ss_pred eEEEEEEEcCCCceEEEEEEEEe
Q psy5697 117 TVYRCRASNEAGVILSRFVHVKA 139 (145)
Q Consensus 117 G~Y~C~A~N~~G~~~s~~v~v~~ 139 (145)
|.|+|.|.|. ..+..+.|..
T Consensus 75 G~Y~C~a~n~---~~~~~l~V~~ 94 (108)
T 2dm7_A 75 GEYSCMCGQE---RTSATLTVRA 94 (108)
T ss_dssp SEEEEEETTE---EEEEECEEEC
T ss_pred EEEEEEEcCC---EEEEEEEEec
Confidence 9999999663 2334555553
No 171
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.25 E-value=5.6e-11 Score=90.37 Aligned_cols=118 Identities=14% Similarity=0.041 Sum_probs=72.8
Q ss_pred eecCceeEeeccccCcccCC-ceeeeEEEeccCCCCCCCEEEEcCCCC-Ccc--CeEEEeeEeccCC-CEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLG-YLVGNIVYSSRSENEHYPFRIKSAPGG-NRT--RGLELTRQTRYEP-SQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~P~~i~~p~~~-~~~--g~~L~C~a~G~P~-P~i~W~~~dg~~ 84 (145)
..|++.|.|...+....... .+. + ........+|.+...|... ... .+.|.|.+.|.|+ +.+.|+ +++..
T Consensus 153 ~~d~G~Y~C~a~n~~~~~~s~~~~---l-~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~-~~~~~ 227 (292)
T 4dkd_C 153 FIQSQDYQCSALMGGRKVMSISIR---L-KVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQ-HNNTK 227 (292)
T ss_dssp GGGCSEEEEEECSTTSCEECCCEE---E-EEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECC-BSSCC
T ss_pred HHHCeEEEEEEEeCCCceeEEEEE---E-EEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEe-CCCcc
Confidence 57888999988653322111 111 1 1111223478888888762 223 3899999999775 568886 46655
Q ss_pred eecccCce----EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 85 IAYVKDLR----IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 85 i~~~~~~~----~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+....... ....+++|.|.++..+ |+|.|+|.|+|.+|.. .+..+.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~~~~~l~V~ 280 (292)
T 4dkd_C 228 LAIPQQSDFHNNRYQKVLTLNLDQVDFQ------HAGNYSCVASNVQGKHSTSMFFRVV 280 (292)
T ss_dssp CCCCBEEEEETTEEEEEEEEEESSCCTT------SCEEEEEEEECSSCEEEEEEEECC-
T ss_pred cccCccceeccceeeeEEEEEECccChh------cCeEEEEEEecCCCCceeEEEEEEe
Confidence 43211111 1123458999988755 8999999999999996 34455554
No 172
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=5.7e-13 Score=105.66 Aligned_cols=122 Identities=13% Similarity=0.028 Sum_probs=77.6
Q ss_pred cceeceeeeecCceeEeeccccCc-c--cCCcee---eeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCC
Q psy5697 2 LNFHISTLLADADTYIIADRSLFP-R--PLGYLV---GNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEP 72 (145)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p-~--~~~~~~---~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~ 72 (145)
|+++-|.|.|||++.|+....... . +.+.+. -+.+.......+.+|.|...|.+ ....| +.|.|.+.|.|.
T Consensus 108 l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~~l~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~ 187 (347)
T 2ifg_A 108 LVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGL 187 (347)
T ss_dssp EECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSSCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSC
T ss_pred EEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCChHHhcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCC
Confidence 466778899999977655421100 0 000000 00011112345678999988877 33334 999999999999
Q ss_pred CEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCe-EEEEEEEcCCCce
Q psy5697 73 SQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHST-VYRCRASNEAGVI 130 (145)
Q Consensus 73 P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G-~Y~C~A~N~~G~~ 130 (145)
|.|+|++ ++..+...........+++|.|.++..+ |+| .|+|.|+|..|..
T Consensus 188 p~i~W~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~~Y~C~a~n~~g~~ 239 (347)
T 2ifg_A 188 EQAGWIL-TELEQSATVMKSGGLPSLGLTLANVTSD------LNRKNVTCWAENDVGRA 239 (347)
T ss_dssp CCCCEEE-SCCCSSEEECCCCCSSEEEEEEESCCST------TTTCCEEECCEETTEEC
T ss_pred CEEEEEc-CCceeecccccceecccceEEEeeCChH------HCCCeEEEEEEcCCCCE
Confidence 9999986 4433221111113345678999988765 899 9999999999987
No 173
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.25 E-value=6.1e-11 Score=85.03 Aligned_cols=71 Identities=14% Similarity=0.229 Sum_probs=54.3
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVH 136 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~ 136 (145)
.+.|.|.+.|.|. .|+|++.||..+....+. ....+| +|.|.++..+ |+|.|+|.|.|..|...+..+.
T Consensus 19 ~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~g~~~~~~~~ 90 (189)
T 2v44_A 19 SKFFTCTAIGEPE-SIDWYNPQGEKIISTQRV-VVQKEGVRSRLTIYNANIE------DAGIYRCQATDAKGQTQEATVV 90 (189)
T ss_dssp CEEEEEEEEECCS-EEEEECTTSCBCCCCSSE-EEEEETTEEEEEECSCCGG------GCEEEEEEEECTTSCEEEEEEE
T ss_pred cEEEEEEeecCCe-eEEEEeCCCCccCCCceE-EEECCCCeEEEEEccCCcc------cCeEEEEEEEeCCCCcEEEEEE
Confidence 3999999999988 999987678776544333 333344 8999888655 8999999999999987666555
Q ss_pred EE
Q psy5697 137 VK 138 (145)
Q Consensus 137 v~ 138 (145)
+.
T Consensus 91 l~ 92 (189)
T 2v44_A 91 LE 92 (189)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 174
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.25 E-value=1.9e-11 Score=90.70 Aligned_cols=88 Identities=13% Similarity=0.128 Sum_probs=62.2
Q ss_pred CCCCEEEEcCC----C-CCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCc---eEEeeCCcEEEcCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAP----G-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDL---RIALSNGSLMFPPFPETGFRPD 113 (145)
Q Consensus 44 ~~~P~~i~~p~----~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~---~~~~~~GsL~i~~~~~~~~~~~ 113 (145)
..+|+|++.+. . ....| +.|.|.+.|.|.|.|+|++ +|..+...... .....+++|.|.++..+
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~----- 82 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPS----- 82 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECCGGGSTTCCEEEGGGTEEEECSCCGG-----
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccCCCCcccceeeeccceEEEEEeCCcc-----
Confidence 45777776643 1 22233 8999999999999999985 78877643321 34455668999888655
Q ss_pred CCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 114 VHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|+|.|.|..|.. .+..+.|.
T Consensus 83 -d~G~Y~C~~~~~~~~~~~~~~l~V~ 107 (241)
T 3grw_A 83 -DRGNYTCVVENKFGSIRQTYTLDVL 107 (241)
T ss_dssp -GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -cCEEEEEEEeecCCceEEEEEEEEe
Confidence 8999999999999987 34455554
No 175
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.25 E-value=5.2e-12 Score=91.97 Aligned_cols=86 Identities=12% Similarity=0.063 Sum_probs=58.6
Q ss_pred CCCEEEEcCCCCCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceE-EeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 45 HYPFRIKSAPGGNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 45 ~~P~~i~~p~~~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~-~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+|.|...|...+.. .+.|.|.+.| |.|.+.|+| ||..+........ ...+++|.|.++..+ |+|.|+|
T Consensus 4 ~~P~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C 75 (196)
T 3p2t_A 4 PKPTLWAEPGSVISWGNSVTIWCQGTL-EAREYRLDK-EESPAPWDRQNPLEPKNKARFSIPSMTED------YAGRYRC 75 (196)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECCT-TCCEEEEEE-TTSCSCSEEECCCSSSSEEEEEESSCCGG------GCEEEEE
T ss_pred CCCEEEccCCCcCCCCCcEEEEeeCCC-CCCEEEEEE-CCCCCcccccccccCCceEEEEeccCCcc------cCceEEE
Confidence 367887777763333 3999999999 889999985 6665532110001 123468999888765 8999999
Q ss_pred EEEcCCCc-eEEEEEEEE
Q psy5697 122 RASNEAGV-ILSRFVHVK 138 (145)
Q Consensus 122 ~A~N~~G~-~~s~~v~v~ 138 (145)
.|.|..|. ..+..+.|.
T Consensus 76 ~a~n~~g~~~~s~~~~l~ 93 (196)
T 3p2t_A 76 YYRSPVGWSQPSDPLELV 93 (196)
T ss_dssp EEEETTEEBCCCCCEEEE
T ss_pred EEeCCCcccCCCccEEEE
Confidence 99999993 344444443
No 176
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.24 E-value=2.2e-11 Score=99.90 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=63.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC---CCccC--eEEEeeEeccCCCEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG---GNRTR--GLELTRQTRYEPSQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~---~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~ 84 (145)
..|++.|.|...+. .. .. .......+|.+...|.. ....| +.|.|.+.|+|+|+|+|+ +||..
T Consensus 299 ~~D~G~Y~C~A~N~---~~--~~------~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~-k~g~~ 366 (423)
T 3qs7_E 299 RNDTGYYTCSSSKH---PS--QS------ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWT-FSRKS 366 (423)
T ss_dssp TTTCEEEEEEETTE---EE--EE------EEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEE-ETTEE
T ss_pred HHHCEEEEEEEecC---CC--ce------EEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEE-ECCEE
Confidence 45667777776554 10 01 11222345666655532 22333 899999999999999997 58888
Q ss_pred eecccCceEEeeCC-cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 85 IAYVKDLRIALSNG-SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 85 i~~~~~~~~~~~~G-sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+..... ...++ .+.+..... .|+|.|+|.|+|.+|+. .+..+.|..
T Consensus 367 l~~~~~---~~~~~~~~~~~~~~~------~D~G~YtC~A~N~~G~~~~s~~L~v~~ 414 (423)
T 3qs7_E 367 FPCEQK---GLDNGYSISKFCNHK------HQPGEYIFHAENDDAQFTKMFTLNIRS 414 (423)
T ss_dssp EECBCC---BCSSSSEEEEECCCT------TCCSCEEEEEEETTEEEEEEEEEC---
T ss_pred CCCccc---cccCCcEEEEEeccc------ccCEEEEEEEEcCCceEEEEEEEEEec
Confidence 764321 00111 121122222 38999999999999998 555666653
No 177
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.24 E-value=8.7e-12 Score=90.66 Aligned_cols=114 Identities=16% Similarity=0.017 Sum_probs=68.4
Q ss_pred eecCceeEeeccccCc--ccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFP--RPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+..- .....+. ..+. ....+|.+...|...+..| +.|.|.+.| |+|.+.|+| ||..+
T Consensus 66 ~~D~G~Y~C~~~~~~~~~~~s~~~~--l~V~---~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 138 (188)
T 1oll_A 66 SRMAGQYSCIYRVGELWSEPSNLLD--LVVT---EMYDTPTLSVHPGPEVISGEKVTFYCRLDT-ATSMFLLLK-EGRSS 138 (188)
T ss_dssp GGGCEEEEEEEEETTEECCCCCCEE--EEEE---SCSCCCEEEEESCSEEETTCEEEEEEECSS-SCSEEEEEE-ESSSC
T ss_pred cccCeEEEEEecCCCCCCCCCCceE--EEec---ccCCCCeEEECCCCccccCCEEEEEEEcCC-CCCEEEEEE-CCccc
Confidence 5788888887643211 1111111 0111 1123677776664433333 899999987 568999985 66554
Q ss_pred ecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC--ceEEEEEEEE
Q psy5697 86 AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG--VILSRFVHVK 138 (145)
Q Consensus 86 ~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G--~~~s~~v~v~ 138 (145)
... ......+++|.|.++..+ |+|.|+|.|+|... +..|..+.|.
T Consensus 139 ~~~--~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~n~~~~~s~~S~~~~l~ 185 (188)
T 1oll_A 139 HVQ--RGYGKVQAEFPLGPVTTA------HRGTYRCFGSYNNHAWSFPSEPVKLL 185 (188)
T ss_dssp EEE--EEECSSEEEEEEEECCGG------GCEEEEEECEEETTEECCCCCCEEEE
T ss_pred ccc--ccCCCceeEEEECCCCcC------CCcEEEEEEEcCCCcCCCCCCcEEEE
Confidence 321 112234568999988765 89999999999752 3345555544
No 178
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.24 E-value=2.9e-11 Score=94.73 Aligned_cols=106 Identities=15% Similarity=0.060 Sum_probs=67.2
Q ss_pred eecCc-eeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccC-CCEEEEEccCCeE
Q psy5697 10 LADAD-TYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYE-PSQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P-~P~i~W~~~dg~~ 84 (145)
..|++ .|.|...+...... . ..+. .....+|.+...+.. .. +..+.|.|.+.|.| .|.|+|++ ||..
T Consensus 98 ~~D~Gs~Y~C~a~n~~g~~~---~-~~~~---~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k-~~~~ 169 (329)
T 3oq3_B 98 SNDSHRRYLCTVTTKNGDCV---Q-GIVR---SHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYK-NNQE 169 (329)
T ss_dssp GGGGGCCEEEEEECTTSCEE---E-EEEE---EEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEE-TTEE
T ss_pred hHhCCCcEEEEEEeCCCcee---e-EEEE---EEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEE-CCcc
Confidence 56888 88887755432211 0 1010 111223433333222 22 23499999999999 99999985 7777
Q ss_pred eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcC--CCce
Q psy5697 85 IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNE--AGVI 130 (145)
Q Consensus 85 i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~--~G~~ 130 (145)
+.... .+....+++|.|.++..+ |+|.|+|.|+|. .|..
T Consensus 170 l~~~~-~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~g~~ 210 (329)
T 3oq3_B 170 LIIDG-TKYSQSGQNLIIHNPELE------DSGRYDCYVHYDDVRIKN 210 (329)
T ss_dssp CCCSS-SSEEEETTEEEECSCCGG------GCEEEEEEEEECCTTSSS
T ss_pred CCCCC-ceEecCCCEEEEeecChh------hCEEEEEEEEecccCCCc
Confidence 75322 233334789999988765 899999999998 7654
No 179
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.23 E-value=2e-11 Score=88.46 Aligned_cols=80 Identities=10% Similarity=-0.033 Sum_probs=57.6
Q ss_pred CCCCCEEEEcCCCCCcc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 43 NEHYPFRIKSAPGGNRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 43 ~~~~P~~i~~p~~~~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
...+|.|...|...+.. .++|.|.+.| |.|.++|+| ||.. ....+++|.|.++..+ |+|.|+
T Consensus 5 ~~~~P~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~W~k-~g~~--------~~~~~~~L~i~~v~~~------D~G~Y~ 68 (184)
T 2gi7_A 5 PLPKPSLQALPSSLVPLEKPVTLRCQGPP-GVDLYRLEK-LSSS--------RYQDQAVLFIPAMKRS------LAGRYR 68 (184)
T ss_dssp CBCCCEEEEESCSEEETTCCEEEEEECST-TCSEEEEEE-TTTC--------CEESSSEEEESSCCGG------GCEEEE
T ss_pred CCCCCeEEeCCCccccCCCcEEEEEeCCC-CCCEEEEEE-CCcc--------ccCcccEEEECcCChh------hCceEE
Confidence 34567888777753333 3999999999 899999985 6543 1235678999988765 899999
Q ss_pred EEEEcCCCc-eEEEEEEEE
Q psy5697 121 CRASNEAGV-ILSRFVHVK 138 (145)
Q Consensus 121 C~A~N~~G~-~~s~~v~v~ 138 (145)
|.|.|..|. ..+..+.|.
T Consensus 69 C~a~n~~g~~~~s~~~~l~ 87 (184)
T 2gi7_A 69 CSYQNGSLWSLPSDQLELV 87 (184)
T ss_dssp EEEEETTEEBCCCCCEEEE
T ss_pred EEEEcCCCccCCCCCEEEE
Confidence 999999884 234333333
No 180
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.23 E-value=2.9e-11 Score=95.75 Aligned_cols=93 Identities=19% Similarity=0.234 Sum_probs=62.5
Q ss_pred CCCCCEEEEcC-CC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeeccc--CceEEeeCCcEEEcCCCCCCCCCCCCC
Q psy5697 43 NEHYPFRIKSA-PG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVK--DLRIALSNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 43 ~~~~P~~i~~p-~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~--~~~~~~~~GsL~i~~~~~~~~~~~~d~ 116 (145)
...+|.|...+ ++ .. +..+.|.|.+.|+|.|+|+|++ ||..+.... .......+|+|.|.-.... ....|+
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~--~~~~D~ 89 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR-NSRFFNIAKDPRVSMRRRSGTLVIDFRSGG--RPEEYE 89 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEE-TTEECCGGGCSSCBCCSSSCCCBCCCTTTC--CTTSSC
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEE-CCEEeeeecCCcceEecCCceEEEEeccCC--CCccCC
Confidence 34678777654 33 22 2338999999999999999984 888765322 2223345778877521110 122389
Q ss_pred eEEEEEEEcCCCceEEEEEEEE
Q psy5697 117 TVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|.|+|.|.|..|...+..+.|.
T Consensus 90 G~Y~C~a~n~~g~~~s~~~~l~ 111 (404)
T 3p3y_A 90 GEYQCFARNKFGTALSNRIRLQ 111 (404)
T ss_dssp EEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEEEcCCCeEeeeeEEEE
Confidence 9999999999999876666555
No 181
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.23 E-value=2.7e-11 Score=88.62 Aligned_cols=110 Identities=12% Similarity=0.156 Sum_probs=66.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCcc--CeEEEeeEec-cCCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRT--RGLELTRQTR-YEPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G-~P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+..... ++..+.-.......+|.+...++. .... .+.|.|.+.| .|+| +|+|++ ||..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~----~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~ 154 (213)
T 3d9a_L 80 TEDFGMYFCQQSNSWPYT----FGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSE 154 (213)
T ss_dssp GGGCEEEEEEECSSSSCE----ECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred hhhCEEEEEeeecCCcce----eCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEc-CCCc
Confidence 578889988886643322 111100001222346776665544 2112 3899999998 6666 899985 8887
Q ss_pred eecc-cCce--EEeeC------CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYV-KDLR--IALSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~-~~~~--~~~~~------GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+... .... ....+ ++|.|.++..+ |+|.|+|.|+|.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 155 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTSTS 203 (213)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------HCCEEEEEEECTTCSS
T ss_pred CcceeeecCCCccCCCCCEEEEEEEEEeccccC------CCCEEEEEEEEccCCC
Confidence 7543 1000 01112 37888877654 7999999999997764
No 182
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.22 E-value=1.2e-10 Score=91.18 Aligned_cols=71 Identities=15% Similarity=0.115 Sum_probs=50.5
Q ss_pred CeEEEeeEeccC---CC-EEEEEccCCeEeecccCceEEe-------eCCcEEEcCCCCCCCCCCCCCe-EEEEEEEcCC
Q psy5697 60 RGLELTRQTRYE---PS-QLGWRFSNNTVIAYVKDLRIAL-------SNGSLMFPPFPETGFRPDVHST-VYRCRASNEA 127 (145)
Q Consensus 60 g~~L~C~a~G~P---~P-~i~W~~~dg~~i~~~~~~~~~~-------~~GsL~i~~~~~~~~~~~~d~G-~Y~C~A~N~~ 127 (145)
.+.|.|.+.|.| +| .|+|++ ||..+.......... .+++|.|.++..+ |+| .|+|.|+|.+
T Consensus 245 ~~~l~C~~~g~p~~~~~i~v~W~~-~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~~Y~C~a~N~~ 317 (329)
T 3oq3_B 245 PANITCTAVSTSLLVDDVLIDWEN-PSGWIIGLDFGVYSILTSSGGITEATLYFENVTEE------YIGNTYTCRGHNYY 317 (329)
T ss_dssp CEEEEEEEEETTCCTTCCEEEEEC-TTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGG------GTTCEEEEEEECSS
T ss_pred CEEEEEEEEECCCCCCCcEEEEEE-CCeeeeccCCceeeeecccCceeEeEEEEEeccHH------HCCCcEEEEEEecC
Confidence 399999999998 88 999975 666642211111111 3568999888665 899 9999999999
Q ss_pred Cce-EEEEEEE
Q psy5697 128 GVI-LSRFVHV 137 (145)
Q Consensus 128 G~~-~s~~v~v 137 (145)
|.. .+..+.|
T Consensus 318 G~~~~~~~l~v 328 (329)
T 3oq3_B 318 FDKTLTTTVVL 328 (329)
T ss_dssp CEEEEEEEEEE
T ss_pred CceEEEEEEEe
Confidence 997 3334433
No 183
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.22 E-value=6.9e-11 Score=98.66 Aligned_cols=72 Identities=15% Similarity=0.015 Sum_probs=50.8
Q ss_pred CeEEEeeEe----ccCCCEEEEEccCCeEeecccC------ceEEeeC---CcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 60 RGLELTRQT----RYEPSQLGWRFSNNTVIAYVKD------LRIALSN---GSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 60 g~~L~C~a~----G~P~P~i~W~~~dg~~i~~~~~------~~~~~~~---GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
.+.|.|.+. |+|.|+|+|++ ||..+..... ......+ ++|.|.++..+ |+|.|+|.|+|.
T Consensus 459 ~v~L~C~~~~~~~~~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~ 531 (585)
T 2ocw_A 459 TLKVPCHFPCKFSSYEKYWCKWNN-TGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRA------DEGWYWCGVKQG 531 (585)
T ss_pred cEEEEEEecCCCCCCccEEEEEee-cCceeeeccCCCCCcceEEecCcccEEEEEECCCCcc------cCeEEEEEeEeC
Confidence 389999997 88999999975 7766542211 1111112 38999888765 899999999999
Q ss_pred CCceEEEEEEEE
Q psy5697 127 AGVILSRFVHVK 138 (145)
Q Consensus 127 ~G~~~s~~v~v~ 138 (145)
+|...+..++|.
T Consensus 532 ~G~~~~~~~~l~ 543 (585)
T 2ocw_A 532 HFYGETAAVYVA 543 (585)
T ss_pred CCccEEEEEEEE
Confidence 997754434443
No 184
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.22 E-value=6.3e-11 Score=85.74 Aligned_cols=77 Identities=16% Similarity=0.270 Sum_probs=52.6
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeE---------eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTV---------IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~---------i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.|+|.|.|+|++.+... +......+....+++|.|.++..+ |+|.|+|.|.|..|..
T Consensus 18 ~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~------D~G~Y~C~~~~~~g~~ 91 (212)
T 1f97_A 18 SIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRK------DNGEYTCMVSEEGGQN 91 (212)
T ss_dssp CEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGG------GCEEEEEEEEETTSSS
T ss_pred CEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcc------cCeEEEEEEEccCCCc
Confidence 3999999999999999998643321 111111234445689999988765 8999999999998843
Q ss_pred -EEE--EEEEEeccC
Q psy5697 131 -LSR--FVHVKADSR 142 (145)
Q Consensus 131 -~s~--~v~v~~~~~ 142 (145)
.+. .+.|...+.
T Consensus 92 ~~~~~~~l~V~~~p~ 106 (212)
T 1f97_A 92 YGEVSIHLTVLVPPS 106 (212)
T ss_dssp EEEEEEEEEEEBCCC
T ss_pred ccEEEEEEEEEcCCC
Confidence 333 444444433
No 185
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.22 E-value=7.5e-11 Score=88.38 Aligned_cols=87 Identities=17% Similarity=0.133 Sum_probs=55.4
Q ss_pred CCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEcc-CCeEeec-----------ccCceEEe-e--CCcEEEcCCCC
Q psy5697 46 YPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFS-NNTVIAY-----------VKDLRIAL-S--NGSLMFPPFPE 107 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~-dg~~i~~-----------~~~~~~~~-~--~GsL~i~~~~~ 107 (145)
+|.+...|.. .... .+.|.|.+.|.|+|.|+|++. +|..+.. ........ . .++|.|.++..
T Consensus 135 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 214 (247)
T 2ghw_B 135 ETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP 214 (247)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG
T ss_pred ceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH
Confidence 4566666655 2333 399999999999999999863 3443210 01111111 1 23699988876
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceEEE--EEEEE
Q psy5697 108 TGFRPDVHSTVYRCRASNEAGVILSR--FVHVK 138 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~G~~~s~--~v~v~ 138 (145)
+ |+|.|+|.|+|..+...+. .+.|.
T Consensus 215 ~------D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 E------DFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp G------GCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred H------HCEEEEEEEccCCCceEcCCEEEEEC
Confidence 5 8999999999976555433 44443
No 186
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.22 E-value=2e-11 Score=85.86 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=52.3
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeec------ccCceEEe----eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAY------VKDLRIAL----SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~------~~~~~~~~----~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+.|.|.+.|.|.|.|.|++.++..+.. ........ .+++|.|.++..+ |+|.|.|.|.|. |..
T Consensus 56 v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~n~-~~~ 128 (145)
T 1z9m_A 56 VVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALA------DEGEYTCSIFTM-PVR 128 (145)
T ss_dssp EEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGG------GCEEEEEEECSS-SCE
T ss_pred EEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChh------hCEEEEEEEEcC-CCc
Confidence 999999999999999998533222211 01111211 1458999988765 899999999999 876
Q ss_pred -EEEEEEEEeccCCCC
Q psy5697 131 -LSRFVHVKADSRIPM 145 (145)
Q Consensus 131 -~s~~v~v~~~~~~p~ 145 (145)
....+.|...++.|+
T Consensus 129 ~~~~~L~V~~~P~~P~ 144 (145)
T 1z9m_A 129 TAKSLVTVLGIPQKPI 144 (145)
T ss_dssp EEEEEEEEECCCC---
T ss_pred eEEEEEEEEeCCCCCc
Confidence 445677776666653
No 187
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.21 E-value=1e-10 Score=98.89 Aligned_cols=119 Identities=13% Similarity=0.078 Sum_probs=74.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCCeEeec
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAY 87 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~ 87 (145)
..|++.|.|...+..........-...+ .....+|.+...+......| +.|.|.+.+ |.|.|+|+ +||..+..
T Consensus 435 ~~d~G~Y~C~a~n~~g~~~~s~~~~v~v---~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~-~~g~~l~~ 509 (642)
T 1e07_A 435 EKNSGLYTCQANNSASGHSRTTVKTITV---SAELPKPSISSNNSKPVEDKDAVAFTCEPEA-QNTTYLWW-VNGQSLPV 509 (642)
T ss_pred hhhCeEEEEEEEcCCCCCcccceEEEEE---eccCCCceEecCCceeecCCCeEEEEEECCC-CCcEEEEE-ECCEeCCC
Confidence 4677788887766543222111101011 11123555544332222233 899999996 99999997 58888765
Q ss_pred ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE--EEEEEEe
Q psy5697 88 VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 139 (145)
Q Consensus 88 ~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s--~~v~v~~ 139 (145)
..+......+++|.|.++..+ |+|.|+|.|+|..|...+ ..+.|..
T Consensus 510 ~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 557 (642)
T 1e07_A 510 SPRLQLSNGNRTLTLFNVTRN------DARAYVCGIQNSVSANRSDPVTLDVLY 557 (642)
T ss_pred CCcEEEcCCCcEEEEeecChh------cCceEEEEeEcCCCCccCCCEEEEEEe
Confidence 443333334569999888655 899999999999998754 4555553
No 188
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.21 E-value=1.1e-10 Score=88.66 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=63.0
Q ss_pred CCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCeE
Q psy5697 45 HYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 45 ~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~ 118 (145)
.+|.|...|.+ .. +..+.|.|.+.|.|. .|+|++.||..+....+. ....+| +|.|.++..+ |+|.
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~-~~~~~~~~~~L~i~~~~~~------D~G~ 74 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRV-VVQKEGVRSRLTIYNANIE------DAGI 74 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTE-EEEEETTEEEEEECSCCGG------GCEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcE-EEecCCCEEEEEEccCCcc------cCEE
Confidence 46777777776 22 334999999999885 999987688776544333 333344 7999888655 8999
Q ss_pred EEEEEEcCCCceEEEEEEEE
Q psy5697 119 YRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 119 Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|+|.|.|..|...+..+.|.
T Consensus 75 Y~C~~~n~~g~~~~~~~~l~ 94 (291)
T 2wim_A 75 YRCQATDAKGQTQEATVVLE 94 (291)
T ss_dssp EEEEEECSSSCEEEEEEEEE
T ss_pred EEEEEecccCceEEEEEEEE
Confidence 99999999998866555554
No 189
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.21 E-value=4.9e-11 Score=95.66 Aligned_cols=71 Identities=20% Similarity=0.183 Sum_probs=53.1
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecc-cCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYV-KDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~-~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+.|.|.+.| |+|.|+|++.++..+... ...+....+|+|.|.++..+ |+|.|+|+|+|..|.. .+..+.|.
T Consensus 264 ~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~ 336 (361)
T 2xot_A 264 LTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVE------DGGVYTCYAMGETFNETLSVELKVY 336 (361)
T ss_dssp EEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTT------SCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEeecCeEEEeecCcc------cCEEEEEEEecCCCccEEEEEEEEE
Confidence 899999999 999999986555443321 11122228899999988765 8999999999999987 44456554
No 190
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.21 E-value=5.6e-11 Score=87.05 Aligned_cols=114 Identities=11% Similarity=0.107 Sum_probs=66.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEecc-CCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRY-EPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~-P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+..... ++..+.-.......+|.+...++. .. +..+.|.|.+.|. |+| +|+|++ ||..
T Consensus 79 ~~D~G~Y~C~~~~~~~~~----~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~ 153 (210)
T 1lk3_L 79 ADDTAIYFCQQSWNGPLT----FGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKI-DGTE 153 (210)
T ss_dssp GGGCEEEEEEECSSSSCE----ECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred HHHCeEEEEEEEcCCCce----eCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEe-CCcc
Confidence 578889998886543322 111110001122346777665554 11 2238999999984 554 899984 8887
Q ss_pred eecc-cCc--eEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEE
Q psy5697 85 IAYV-KDL--RIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRF 134 (145)
Q Consensus 85 i~~~-~~~--~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~ 134 (145)
+... ... .....+| +|.|.++..+ |+|.|+|.|+|..... +.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~~~~~~~ 207 (210)
T 1lk3_L 154 RRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYE------SHNLYTCEVVHKTSSSPVVKS 207 (210)
T ss_dssp CCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEECTTCSSCEEEE
T ss_pred CCCCceEccCCccCCCCCEEEEEEEEEChHHhc------cCCcEEEEEEecCCCCeeeee
Confidence 6532 000 0111233 5888776544 7999999999986643 4443
No 191
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.21 E-value=1e-10 Score=100.13 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=65.8
Q ss_pred CCCCCEEEEcCCCC-Ccc--CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCe
Q psy5697 43 NEHYPFRIKSAPGG-NRT--RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 43 ~~~~P~~i~~p~~~-~~~--g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G 117 (145)
....|.|+..+.+. ... .+.|.|.+.|.|.|+|+|+ +||..+...........++ +|.|..+... |+|
T Consensus 479 ~~~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~-k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~------D~G 551 (573)
T 3uto_A 479 SEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWH-KDDRELKQSVKYMKRYNGNDYGLTINRVKGD------DKG 551 (573)
T ss_dssp GGGSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEE-ETTEECCSSSSEEEEEETTEEEEEECSCCGG------GCE
T ss_pred cccCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEE-ECCEEcccCCcEEEEEcCCEEEEEEcCCCcc------cCc
Confidence 34578888888772 233 3899999999999999998 4888887655444444455 6888776544 899
Q ss_pred EEEEEEEcCCCce-EEEEEEE
Q psy5697 118 VYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 118 ~Y~C~A~N~~G~~-~s~~v~v 137 (145)
.|.|.|+|.+|+. ....+.|
T Consensus 552 ~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 552 EYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEeCCCcEEEEEEEEE
Confidence 9999999999998 3334544
No 192
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.21 E-value=9.3e-11 Score=86.25 Aligned_cols=117 Identities=9% Similarity=0.056 Sum_probs=67.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--e-EEEeeE-eccCCCEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--G-LELTRQ-TRYEPSQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~-~L~C~a-~G~P~P~i~W~~~dg~~ 84 (145)
..|++.|.|......... .... +.-........|.+...+.. ....| + .|.|.+ .|+|.|.|+|++ ||..
T Consensus 86 ~~D~G~Y~C~~~~~~~~~---~~~~-~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~~~ 160 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGT---AEAT-ARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NGQR 160 (231)
T ss_dssp GGGCEEEEEEEECGGGCE---EEEE-EEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TTEE
T ss_pred cccCceEEEEEEecCCCc---eEEE-EEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEE-CCcc
Confidence 578888888865543111 1111 00001112334777776665 22233 5 999999 999999999984 7887
Q ss_pred eeccc---CceEEe------eC------CcEEEcCCCCCCCCCCCCCeEEEEEEEc-----CCCceEEEEEEE
Q psy5697 85 IAYVK---DLRIAL------SN------GSLMFPPFPETGFRPDVHSTVYRCRASN-----EAGVILSRFVHV 137 (145)
Q Consensus 85 i~~~~---~~~~~~------~~------GsL~i~~~~~~~~~~~~d~G~Y~C~A~N-----~~G~~~s~~v~v 137 (145)
+.... ....+. .+ ++|.|.... . .|.|.|+|.|+| ..|...+..+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~-~-----dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l 227 (231)
T 2pet_A 161 LEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRK-D-----DRDASFHCAAHYSLPEGRHGRLDSPTFHL 227 (231)
T ss_dssp CCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCG-G-----GGGCEEEEEEEEECGGGCEEEEECCCEEC
T ss_pred CccccccccceeecceeEecCCCeEEEEEEEEEecch-h-----hCCceEEEEEEcCCcccccccccccceEE
Confidence 76433 111111 12 447765322 2 269999999999 455544444443
No 193
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.21 E-value=9.5e-12 Score=90.73 Aligned_cols=86 Identities=12% Similarity=0.000 Sum_probs=57.9
Q ss_pred CCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCCeEeecccC-ceEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 45 HYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKD-LRIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 45 ~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~-~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+|.|...|...+..| +.|.|.+.|.|. .|+|+| ||..+..... ......+++|.|.++..+ |+|.|+|
T Consensus 4 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C 75 (196)
T 2d3v_A 4 SKATLWAEPGSVISRGNSVTIRCQGTLEAQ-EYRLVK-EGSPEPWDTQNPLEPKNKARFSIPSMTEH------HAGRYRC 75 (196)
T ss_dssp CBCEEEEESCSEEETTCCEEEEEECCTTCC-EEEEEE-TTCSSCSEEECCCSSTTEEEEEESSCCGG------GCEEEEE
T ss_pred CCCEEEeCCCCcccCCCeEEEEEeCCCCCc-EEEEEE-CCCCCCcccccccCCccccEEEeccCChh------HCeEEEE
Confidence 4678887777533333 999999999876 999985 6665532110 001223458999988765 8999999
Q ss_pred EEEcCCCce-EEEEEEEE
Q psy5697 122 RASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 122 ~A~N~~G~~-~s~~v~v~ 138 (145)
.|.|..|.. .+..+.|.
T Consensus 76 ~a~n~~g~~~~s~~~~l~ 93 (196)
T 2d3v_A 76 YYYSPAGWSEPSDPLELV 93 (196)
T ss_dssp EEEETTEECBCCCCEEEE
T ss_pred EEeCCCCcCCcCccEEEE
Confidence 999998854 34433333
No 194
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.21 E-value=3.1e-11 Score=89.98 Aligned_cols=76 Identities=9% Similarity=0.113 Sum_probs=51.5
Q ss_pred CCEEEEcCCCCCcc--CeEEEeeEe-ccCCCEEEEEccCCeEeecccCceEEeeC--C--cEEEcCCCCCCCCCCCCCeE
Q psy5697 46 YPFRIKSAPGGNRT--RGLELTRQT-RYEPSQLGWRFSNNTVIAYVKDLRIALSN--G--SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 46 ~P~~i~~p~~~~~~--g~~L~C~a~-G~P~P~i~W~~~dg~~i~~~~~~~~~~~~--G--sL~i~~~~~~~~~~~~d~G~ 118 (145)
.|+|+........+ .+.|.|.+. +.|.|+|+|+ +||+++...+..+..... | +|.|.++..+ |+|.
T Consensus 3 ~p~~~~~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~-kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~------D~G~ 75 (207)
T 3rbs_A 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYI-FNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDE------DEGT 75 (207)
T ss_dssp ---CCEEEEEEECGGGCEEEEEECSCCCSCCEEEEE-ETTEEECSSSSCEEEECTTTCEEEEEESCCCGG------GCEE
T ss_pred CCeeecCCceEEEeCCeEEEEEEEecCCCCCEEEEE-ECCEECccCCCEEEEEeCCCCEEEEEECCCChh------hCEE
Confidence 35555544322222 389999985 5899999998 589998755444433332 4 6999888765 8999
Q ss_pred EEEEEEcCCCce
Q psy5697 119 YRCRASNEAGVI 130 (145)
Q Consensus 119 Y~C~A~N~~G~~ 130 (145)
|+|.|.| |..
T Consensus 76 Y~C~a~N--g~a 85 (207)
T 3rbs_A 76 YTFQLQD--GKA 85 (207)
T ss_dssp EEEEEEE--TTE
T ss_pred EEEEEEC--CCe
Confidence 9999999 544
No 195
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.20 E-value=8.7e-11 Score=85.78 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=64.7
Q ss_pred eceee-eecCceeEeeccccCccc----CCceeeeEEEeccCCCCCCCEEEEcCCC-CCccCeEEEeeEecc----CCCE
Q psy5697 5 HISTL-LADADTYIIADRSLFPRP----LGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTRGLELTRQTRY----EPSQ 74 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g~~L~C~a~G~----P~P~ 74 (145)
.|..+ ..|+++|.|......... ...+.-. |. ....+|.+.. |.. ..+..+.|.|.+.|. |+|+
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~-V~----~~~~~p~i~~-~~~~~~G~~v~L~C~~~~~~~~~p~p~ 158 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLE-VT----ALIEKPDIHF-LEPLESGRPTRLSCSLPGSCEAGPPLT 158 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEE-EE----CCCCCCEEC---CCCCTTCCEEEEEECTTCCSCSSCCE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEE-Ee----cCCCCCceec-CccccCCCeEEEEEEeccCCCCCCCce
Confidence 34444 678889988775431000 0111100 11 1123565433 332 122338999999874 9999
Q ss_pred EEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 75 LGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 75 i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|++ +|..... +. ...+++|.|.++..+ |.|.|+|.|+|..|.. .++.++|.
T Consensus 159 v~W~~-~~~~~~~-~~---~~~~~~L~i~~~~~~------~~g~Y~C~a~n~~~~~~~~~~v~l~ 212 (214)
T 2zg1_A 159 FSWTG-NALSPLD-PE---TTRSSELTLTPRPED------HGTNLTCQMKRQGAQVTTERTVQLN 212 (214)
T ss_dssp EEEES-STTSSSC-SS---CCCSSEEEECCCTTC------CSCEEEEEEECC----CCEEEEECC
T ss_pred EEEeC-CCCccCC-CC---ceeEEEEEEecccHH------cCcEEEEEEEeCCCCcceEEEEEEE
Confidence 99985 5543221 11 134668999776433 7899999999997654 55555553
No 196
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.20 E-value=4.9e-11 Score=88.28 Aligned_cols=80 Identities=16% Similarity=0.107 Sum_probs=58.7
Q ss_pred CCCCEEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 44 EHYPFRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
...+.|+..|.+ ... ..+.|.|.+.|+|.|.|+|++ +|..+... .+++|.|.++..+ |+|.|+
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~ 81 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIPNG-------NTSELIFNAVHVK------DAGFYV 81 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEE-TTEECTTC-------CSSEEEETTCCGG------GCEEEE
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECCCC-------CCCEEEEccCChh------hCeEeE
Confidence 345678888877 223 339999999999999999985 77765432 3568999888655 899999
Q ss_pred EEEEcCCCceEEEEEEE
Q psy5697 121 CRASNEAGVILSRFVHV 137 (145)
Q Consensus 121 C~A~N~~G~~~s~~v~v 137 (145)
|.|.|..|...+..+.+
T Consensus 82 C~~~n~~~~~~s~~~~l 98 (218)
T 3k0w_A 82 CRVNNNFTFEFSQWSQL 98 (218)
T ss_dssp EEEECTTCCEECCCEEE
T ss_pred EEEEcCCCCceeeEEEE
Confidence 99999999765543333
No 197
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.1e-10 Score=80.46 Aligned_cols=84 Identities=8% Similarity=-0.055 Sum_probs=60.2
Q ss_pred CCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccCCeEeeccc--C-------ceEEeeCC---cEEEcCCCCCCC
Q psy5697 46 YPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVK--D-------LRIALSNG---SLMFPPFPETGF 110 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~--~-------~~~~~~~G---sL~i~~~~~~~~ 110 (145)
+|.|++.+.+ .+..| +.|+|.++| .|+++|+ +||++|.... . ...+..+| +|.|.++..+
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~-knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~-- 82 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWF-LNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQ-- 82 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEE-ESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCST--
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEE-ECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHH--
Confidence 4688899888 33334 999999998 7899997 5899887543 0 22444455 7999988766
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy5697 111 RPDVHSTVYRCRASNEAGVILSRFVHVKAD 140 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~G~~~s~~v~v~~~ 140 (145)
|+|.|+|...+.. ..++.++|...
T Consensus 83 ----D~G~Y~~~~~~~~--~ssA~L~V~~~ 106 (112)
T 2e6q_A 83 ----DSGALVGFSCPGV--QDSAALTIQES 106 (112)
T ss_dssp ----TCSEEEEEEETTE--EEEEEEEEECS
T ss_pred ----HCccEEEEEECCe--eEEEEEEEeCC
Confidence 8999977554432 35678888744
No 198
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.19 E-value=2.8e-11 Score=88.53 Aligned_cols=111 Identities=10% Similarity=0.112 Sum_probs=66.9
Q ss_pred eecCceeEeeccccCcc--cCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccC-C-CEEEEEccCC
Q psy5697 10 LADADTYIIADRSLFPR--PLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYE-P-SQLGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P-~-P~i~W~~~dg 82 (145)
..|++.|.|........ ..+... . +.. ......+|.+...+.+ .. +..+.|.|.+.|.+ + ++|+|+ +||
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~~~-~-l~V-~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~-k~g 154 (213)
T 3mj8_L 79 AGDEADYYCQSWDGTNSAWVFGSGT-K-VTV-LGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWE-ADG 154 (213)
T ss_dssp GGGCEEEEEEEEETTTTEEEEBCCE-E-EEE-ECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEE-ETT
T ss_pred hhhCEEEEEEeccCCcceeEEcCce-E-EEE-eCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEE-cCC
Confidence 67888998887654331 100000 0 111 1122367888777765 22 23389999999974 3 399997 488
Q ss_pred eEeeccc--CceE-----EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 83 TVIAYVK--DLRI-----ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 83 ~~i~~~~--~~~~-----~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
..+.... .... ....++|.|.++..+ |+|.|+|.|+|..|..
T Consensus 155 ~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~~ 203 (213)
T 3mj8_L 155 TPITQGVKTTQPSKSDSKYMATSYLTMTADAWK------SRNTFICKVTHGGNTV 203 (213)
T ss_dssp EEECTTEEECCCEEETTEEEEEEEEEEESHHHH------SCSCEEEEEEETTEEE
T ss_pred cccCCCcccCCcCccCCcEEEEEEEEEeHHHcC------CCCEEEEEEEECCccE
Confidence 8875311 0001 111235778766544 7999999999999765
No 199
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.19 E-value=5e-11 Score=91.48 Aligned_cols=80 Identities=10% Similarity=0.100 Sum_probs=56.7
Q ss_pred CCCCEEEEcCCCCCccC--eEEEeeEecc-CCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 44 EHYPFRIKSAPGGNRTR--GLELTRQTRY-EPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 44 ~~~P~~i~~p~~~~~~g--~~L~C~a~G~-P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
..+|.|++.+......| +.|.|.+.|. |.|+|+|++ ||..+...........+++|.|.++..+ |+|.|+
T Consensus 5 ~~~P~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~ 77 (317)
T 2y25_A 5 FTGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHDFKDGICTLLITEFSKK------DAGIYE 77 (317)
T ss_dssp SSCCEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCSCC-----CCEEEEETTCCST------TCSCEE
T ss_pred cCCCcEeeeeeEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCCCcEEEECCeEEEEEccCCcc------cCeEEE
Confidence 35677775543223333 9999999998 889999984 7888764333222233448999888765 899999
Q ss_pred EEEEcCCCce
Q psy5697 121 CRASNEAGVI 130 (145)
Q Consensus 121 C~A~N~~G~~ 130 (145)
|.|+|..|..
T Consensus 78 C~~~n~~g~~ 87 (317)
T 2y25_A 78 VILKDDRGKD 87 (317)
T ss_dssp EEEESSSCEE
T ss_pred EEEECCCCcE
Confidence 9999999976
No 200
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.18 E-value=8.2e-11 Score=86.69 Aligned_cols=112 Identities=17% Similarity=0.155 Sum_probs=61.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEE-EeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEec-cCCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIV-YSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTR-YEPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G-~P~P-~i~W~~~dg~ 83 (145)
..|+++|.|.......... ..++..+ .........+|.+...++. ....| +.|.|.+.| +|.| +|+|+ +||.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~-~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~-~~g~ 165 (219)
T 1c1e_H 88 NEDMATYFCARGTTIVRAM-DYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN-SGSL 165 (219)
T ss_dssp GGGCEEEEEEEEETTTTEE-EEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEG-GGTB
T ss_pred cccCEEEEEEEeccCcccc-eeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEE-eCCc
Confidence 5788888888755321000 0111100 0011112345766554443 33333 899999999 9999 99996 5776
Q ss_pred EeecccCceEEe-----eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VIAYVKDLRIAL-----SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i~~~~~~~~~~-----~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.......... ..++|.|... .. |+|.|+|.|+|..|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~------d~g~Y~C~a~n~~~~~ 210 (219)
T 1c1e_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSS-PR------PSETVTCNVAHPASST 210 (219)
T ss_dssp CTTEEECCCEESSSCEEEEEEEEEESS-ST------TTSCCEEEEEEGGGTE
T ss_pred ccceEecCCcccCCeEEEEEEEEEecc-cC------CCCEEEEEEEeCCCCc
Confidence 532111111111 1135777322 11 5699999999998875
No 201
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.18 E-value=6.1e-11 Score=92.81 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=53.3
Q ss_pred eEEEeeE-----eccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC-Cce--EE
Q psy5697 61 GLELTRQ-----TRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA-GVI--LS 132 (145)
Q Consensus 61 ~~L~C~a-----~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~-G~~--~s 132 (145)
+.|.|.+ .|.|.|.|+|+ +||..+... .+....+.+|.|.++..+ |+|.|+|.|+|.. |.. .+
T Consensus 138 ~~l~C~~~~~~~~g~p~~~v~W~-k~~~~l~~~--~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~g~~~~~~ 208 (349)
T 4dep_C 138 QRITCPNVDGYFPSSVKPTITWY-MGCYKIQNF--NNVIPEGMNLSFLIALIS------NNGNYTCVVTYPENGRTFHLT 208 (349)
T ss_dssp EEEECCSCTTSSCTTSCCEEEEE-ETTEECCSC--SSEEEETTEEEEESCCGG------GCEEEEEEEEEEETTEEEEEE
T ss_pred EEEEcCCCcccccCCCCceEEEe-eCCEECCCc--cceeecCCEEEEeeeeec------CCcEEEEEEEEeeCCEEEEEE
Confidence 8999986 89999999998 488887532 233444557999988765 8999999999998 654 45
Q ss_pred EEEEEEe
Q psy5697 133 RFVHVKA 139 (145)
Q Consensus 133 ~~v~v~~ 139 (145)
..+.|..
T Consensus 209 ~~~~l~v 215 (349)
T 4dep_C 209 RTLTVKV 215 (349)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6665553
No 202
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.18 E-value=3.2e-11 Score=94.08 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=71.8
Q ss_pred eecCceeEeeccccCcccCCceeeeE-EEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeE---eccC-CCEEEEEccC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNI-VYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQ---TRYE-PSQLGWRFSN 81 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a---~G~P-~P~i~W~~~d 81 (145)
..|++.|.|...+............. +.........+|.++..+.. ....| +.|.|.+ .|+| +|.+.|+ +|
T Consensus 189 ~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~-~~ 267 (339)
T 3o4o_C 189 LEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWT-AN 267 (339)
T ss_dssp GGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEE-SS
T ss_pred HhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEE-EC
Confidence 56788888887654322111111111 11111223457888777665 23333 8999999 9999 9999997 57
Q ss_pred CeEeecc--------cCceEEeeCC------cEEEcCCCCCCCCCCCCC-eEEEEEEEcCCCce
Q psy5697 82 NTVIAYV--------KDLRIALSNG------SLMFPPFPETGFRPDVHS-TVYRCRASNEAGVI 130 (145)
Q Consensus 82 g~~i~~~--------~~~~~~~~~G------sL~i~~~~~~~~~~~~d~-G~Y~C~A~N~~G~~ 130 (145)
|..+... ........+| +|.|.++..+ |+ |.|+|.|+|.+|+.
T Consensus 268 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~------d~~G~Y~C~a~N~~G~~ 325 (339)
T 3o4o_C 268 DTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTRE------DLHMDFKCVVHNTLSFQ 325 (339)
T ss_dssp SSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCC------SCCCCCEEEEEETTEEE
T ss_pred CeecccccccccceecceEEecccCceEEEEEEEEEEechh------hcCccEEEEEEeccCce
Confidence 7665321 0112233455 7999888765 77 99999999999987
No 203
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.18 E-value=1.5e-10 Score=84.06 Aligned_cols=61 Identities=11% Similarity=0.067 Sum_probs=43.6
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCc---EEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGS---LMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~Gs---L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.|+|.|+|+|++ ++..+.. ......+|. +.|..+..+ |.|.|+|.|+|.+|..
T Consensus 120 ~v~l~C~~~g~P~p~v~W~~-~~~~~~~---~~~~~~~~~~~~~~i~~v~~~------d~G~Y~C~a~N~~g~~ 183 (202)
T 3bp6_B 120 EVQLTCQARGYPLAEVSWQN-VSVPANT---SHIRTPEGLYQVTSVLRLKPQ------PSRNFSCMFWNAHMKE 183 (202)
T ss_dssp CEEEEEEEEEBSCCEEEETT-CCSCCEE---EEEECTTSCEEEEEEEEECCC------TTCCEEEEEEETTTTE
T ss_pred eEEEEEEccccCCceEEEEe-CCCCccC---ceeeCCCCCEEEEEEEEEEcC------CCCEEEEEEEcCCccc
Confidence 38999999999999999964 6554421 122334443 334455433 7999999999999987
No 204
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.18 E-value=8.8e-11 Score=85.86 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=66.7
Q ss_pred eceee-eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEec-cCCCEEEEEc
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTR-YEPSQLGWRF 79 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G-~P~P~i~W~~ 79 (145)
.|..+ ..|++.|.|...+...... .++..+.-.......+|.+...++. .. +..+.|.|.+.| +|.|+|+|++
T Consensus 74 ~I~~v~~~D~G~Y~C~~~~~~~~~~--~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k 151 (213)
T 3nl4_L 74 TISDLECADAATYYCQSTYENPTYV--SFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEV 151 (213)
T ss_dssp EECSCCGGGCEEEEEEECCSSTTTC--EECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEE
T ss_pred EECCCChHHCEEEEEecCCCCceeE--EeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEe
Confidence 34444 6788899998866443200 1111010001114567777665554 22 223899999999 9999999974
Q ss_pred cCCeEeeccc---------CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 80 SNNTVIAYVK---------DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 80 ~dg~~i~~~~---------~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
||..+.... ........++|.|.++..+ |.|.|+|.|+ .|
T Consensus 152 -~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~Y~C~a~--~g 200 (213)
T 3nl4_L 152 -DGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYN------SHKEYTCKVT--QG 200 (213)
T ss_dssp -TTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEE--ET
T ss_pred -CCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcC------CCCeEEEEEE--eC
Confidence 887764211 0001112245778776544 7999999999 55
No 205
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.17 E-value=1.8e-10 Score=87.11 Aligned_cols=128 Identities=18% Similarity=0.164 Sum_probs=73.5
Q ss_pred eeceee-eecCceeEeeccccCcccCCceeeeE--EEecc-----------CCCCCCCEEEEcCCC-CC--ccCeEEEee
Q psy5697 4 FHISTL-LADADTYIIADRSLFPRPLGYLVGNI--VYSSR-----------SENEHYPFRIKSAPG-GN--RTRGLELTR 66 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~-----------~~~~~~P~~i~~p~~-~~--~~g~~L~C~ 66 (145)
++|..+ ..|+++|+|...+..+... ..++.. +.... .....+|.+...|.. .. +..+.|.|.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~-~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 161 (256)
T 3umt_A 83 LELRSLTSEDSAVYYCARDDRYPAWF-AYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCR 161 (256)
T ss_dssp EEECSCCGGGCEEEEEEECCSTTCCS-CEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEE
T ss_pred EEECCCCcccCEEEEEEEccCCCccc-cEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEE
Confidence 344444 6799999998866522111 111111 11110 011136777777765 22 333999999
Q ss_pred EeccCCCEEEEEccC-CeEee---c--------ccCceEEe-eC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 67 QTRYEPSQLGWRFSN-NTVIA---Y--------VKDLRIAL-SN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 67 a~G~P~P~i~W~~~d-g~~i~---~--------~~~~~~~~-~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
+.|.|.|.|.|++.+ |..+. . .+...... .. .+|.|.++..+ |+|.|+|.|.|..+...
T Consensus 162 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~~~~~~f 235 (256)
T 3umt_A 162 ASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESE------DFVDYYCLQYASSPPTF 235 (256)
T ss_dssp ESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGG------GCSEEEEEECSSSSCEE
T ss_pred EecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChh------HCEEEEEEEeeCCCcEE
Confidence 999999999998732 22221 0 01111111 12 25999988765 89999999999866554
Q ss_pred E--EEEEEE
Q psy5697 132 S--RFVHVK 138 (145)
Q Consensus 132 s--~~v~v~ 138 (145)
+ ..+.|.
T Consensus 236 g~gt~L~V~ 244 (256)
T 3umt_A 236 GGGTKLEIK 244 (256)
T ss_dssp CCCEEEEEC
T ss_pred CCCEEEEEE
Confidence 3 355554
No 206
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.17 E-value=5.5e-10 Score=83.03 Aligned_cols=117 Identities=14% Similarity=0.123 Sum_probs=66.6
Q ss_pred eecCceeEeeccccCcccCCceeeeEEE-eccCCCCCCCEEEEcCCCCC--ccCeEEEeeEecc-CC--CEEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVY-SSRSENEHYPFRIKSAPGGN--RTRGLELTRQTRY-EP--SQLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a~G~-P~--P~i~W~~~dg~ 83 (145)
..|+++|.|.........+ .++..+. ........+|.+...+.... +..+.|.|.+.|. |. |+|+|+ +||.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~--~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~-~~~~ 164 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNA--YWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWG-KSGK 164 (220)
T ss_dssp GGGCEEEEEEEEETTTEEE--EECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEES-CCCS
T ss_pred hhhCEEEEEEEeccccccc--eecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEe-cCCE
Confidence 6788888887754322110 1111110 01111234676665553222 2338999999998 76 799996 5766
Q ss_pred EeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy5697 84 VIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFV 135 (145)
Q Consensus 84 ~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v 135 (145)
.+...........+| .|.|.+.... |.|.|+|.|+|..|++....+
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~ytC~v~n~~~~~~~~~~ 216 (220)
T 2fbj_H 165 DITTVNFPPALASGGRYTMSNQLTLPAVECP------EGESVKCSVQHDSNPVQELDV 216 (220)
T ss_dssp SCEEEECCCEECSSSCEEEEEEEEECGGGSC------TTCEEEEEEEETTSCCEEEEE
T ss_pred ecceEecCceECCCCCEEEEEEEEECHHHcC------CCCeEEEEEEcCCCceEcCCC
Confidence 542111111222344 3666544322 799999999999999865544
No 207
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.17 E-value=1.2e-11 Score=96.86 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=51.6
Q ss_pred eecCceeEeeccccC-ccc---CCceeeeEEEeccCCCCCCCEEEEcCCC---CCccC--eEEEeeEe----ccCCCEEE
Q psy5697 10 LADADTYIIADRSLF-PRP---LGYLVGNIVYSSRSENEHYPFRIKSAPG---GNRTR--GLELTRQT----RYEPSQLG 76 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~-p~~---~~~~~~~~~~~~~~~~~~~P~~i~~p~~---~~~~g--~~L~C~a~----G~P~P~i~ 76 (145)
..|++.|.|...+.. ... ...+. ..+........+|.++..+.. ....| +.|.|.+. |+|.|.|+
T Consensus 186 ~~d~G~Y~C~a~n~~~g~~~~~~~~~~--l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~ 263 (349)
T 4dep_C 186 ISNNGNYTCVVTYPENGRTFHLTRTLT--VKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVW 263 (349)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEE--EEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEE
T ss_pred ecCCcEEEEEEEEeeCCEEEEEEEEEE--EEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEE
Confidence 567788888775532 211 11111 011111112336777666543 22233 89999999 78999999
Q ss_pred EEccCCeEeecc-cCceE-----------EeeCCcEEEcCCCCCCCCCCCCC-eEEEEEEEcCCCceE-EEEEEEE
Q psy5697 77 WRFSNNTVIAYV-KDLRI-----------ALSNGSLMFPPFPETGFRPDVHS-TVYRCRASNEAGVIL-SRFVHVK 138 (145)
Q Consensus 77 W~~~dg~~i~~~-~~~~~-----------~~~~GsL~i~~~~~~~~~~~~d~-G~Y~C~A~N~~G~~~-s~~v~v~ 138 (145)
|+ +||..+... ..... ....++|.|.++..+ |+ |.|+|.|+|.+|... +..+.|.
T Consensus 264 W~-~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 264 WT-IDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSE------DLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp EE-SSCC--------CCCCEEEECCTTCCEEEEECC-------------------CEEEEECSSCEEEEECC----
T ss_pred EE-ECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHH------HcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 98 577776541 11110 011235888877655 78 999999999999973 3355554
No 208
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.17 E-value=1.5e-10 Score=88.32 Aligned_cols=120 Identities=10% Similarity=0.029 Sum_probs=68.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCcc--CeEEEeeEeccCCC-----EEEEEcc-
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRT--RGLELTRQTRYEPS-----QLGWRFS- 80 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P-----~i~W~~~- 80 (145)
..|++.|.|...+..+......++..+ ...+..+|.++..|.. .... .+.|.|.+.|.|+| .|+|++.
T Consensus 88 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~---~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 164 (256)
T 1nqb_A 88 SEDSAVYYCARYDYYGSSYFDYWGQGT---TVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQK 164 (256)
T ss_dssp GGGCEEEEEEECCTTSSSSCSEECCCE---EEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred hhhCEEEEEEEeeccCccceeEEcCce---eeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEEC
Confidence 578889988886653320001111101 0111234566666655 2233 39999999999976 9999874
Q ss_pred CCeEeec------------ccCceEEe--eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE--EEEEEE
Q psy5697 81 NNTVIAY------------VKDLRIAL--SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVK 138 (145)
Q Consensus 81 dg~~i~~------------~~~~~~~~--~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s--~~v~v~ 138 (145)
+|..+.. ..+..... ..++|.|.++..+ |+|.|.|.|.|..+...+ ..+.|.
T Consensus 165 ~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 165 PGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE------DLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp TTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChH------HCEEEEEEEccCCceEECCCEEEEEE
Confidence 4543310 01111111 1237999888765 899999999997554433 244444
No 209
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.16 E-value=1.8e-10 Score=95.26 Aligned_cols=118 Identities=14% Similarity=0.007 Sum_probs=72.1
Q ss_pred eecCc-eeEeeccccCcccCC-ceeeeEEEeccCCCCCCCEEEEcCCCC-C--ccCeEEEeeEeccCCCE-EEEEccCCe
Q psy5697 10 LADAD-TYIIADRSLFPRPLG-YLVGNIVYSSRSENEHYPFRIKSAPGG-N--RTRGLELTRQTRYEPSQ-LGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~-~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~P~~i~~p~~~-~--~~g~~L~C~a~G~P~P~-i~W~~~dg~ 83 (145)
..|++ .|.|...+......+ .+. .........+|.|...|.+. . +..+.|.|.+.|.|.|. |+|++ +|.
T Consensus 177 ~~d~G~~Y~C~a~n~~~~~~s~~~~----l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~-~~~ 251 (524)
T 2ec8_A 177 RAYHRLCLHCSVDQEGKSVLSEKFI----LKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKR-ENS 251 (524)
T ss_dssp GGGTTCEEEEEEC----CCCCCCEE----CCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEE-TTC
T ss_pred hhhCCceEEEEEEECCceEEEEEEE----EEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEe-CCC
Confidence 56777 888877543222111 111 00111224678888777662 2 23399999999999997 99985 555
Q ss_pred Ee--ecccCce-----EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE-EEEEEEE
Q psy5697 84 VI--AYVKDLR-----IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVK 138 (145)
Q Consensus 84 ~i--~~~~~~~-----~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~-s~~v~v~ 138 (145)
.+ ....... ....+++|.|.++..+ |+|.|+|.|+|..|... +..+.|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~ 308 (524)
T 2ec8_A 252 QTKLQEKYNSWHHGDFNYERQATLTISSARVN------DSGVFMCYANNTFGSANVTTTLEVV 308 (524)
T ss_dssp SCCCCEEEEEEECSSSCEEEEEEEEESSCCTT------TCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCccccccccccccCCccceEEEEEECCCCHH------HCEEEEEEEEecCCceEEEEEEEEe
Confidence 52 2111111 1234568999888655 89999999999999974 3345554
No 210
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.16 E-value=1.3e-10 Score=87.89 Aligned_cols=133 Identities=15% Similarity=0.108 Sum_probs=73.6
Q ss_pred eeceee-eecCceeEeeccccCcccCCceeeeEEEecc---------CCCCCCCEEEEcCCC-CCc--cCeEEEeeEecc
Q psy5697 4 FHISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSR---------SENEHYPFRIKSAPG-GNR--TRGLELTRQTRY 70 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---------~~~~~~P~~i~~p~~-~~~--~g~~L~C~a~G~ 70 (145)
++|..+ ..|+++|.|...+......+... ...+... .....+|.+...|.. ... ..+.|.|.+.|.
T Consensus 82 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 160 (253)
T 3uzq_A 82 LHLSSLTSGDTAVYYCSRGWEGFAYWGQGT-LVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASEN 160 (253)
T ss_dssp EEECSCCGGGCEEEEEEECSSSCCEECCCE-EEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSC
T ss_pred EEeCCCCcccCEEEEEEEeeCCccEECCCc-EEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCc
Confidence 444444 68999999988663222111101 1011100 012235677777765 223 339999999999
Q ss_pred CCC----EEEEEccC-CeEee---c--------ccCceEE-eeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 71 EPS----QLGWRFSN-NTVIA---Y--------VKDLRIA-LSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 71 P~P----~i~W~~~d-g~~i~---~--------~~~~~~~-~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
|.| .|.|++.+ |.... . .+..... ... .+|.|.++..+ |+|.|.|.|.|..+...
T Consensus 161 ~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~n~~~~~f 234 (253)
T 3uzq_A 161 VDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEAD------DVATYFCQRSNEVPWTF 234 (253)
T ss_dssp CEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEECSSSSCCB
T ss_pred cccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHH------HCEEEEEEEccCCCcEE
Confidence 988 99998632 22211 0 0111111 122 26999988765 89999999999877664
Q ss_pred E--EEEEEEeccCC
Q psy5697 132 S--RFVHVKADSRI 143 (145)
Q Consensus 132 s--~~v~v~~~~~~ 143 (145)
. ..+.|....+.
T Consensus 235 g~gt~l~v~~~~~~ 248 (253)
T 3uzq_A 235 GGGTKLEIKRPLEH 248 (253)
T ss_dssp CCCEEEEECCC---
T ss_pred CCCEEEEEcCCCCC
Confidence 3 45666544443
No 211
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.16 E-value=4.5e-11 Score=87.08 Aligned_cols=55 Identities=11% Similarity=0.241 Sum_probs=45.8
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+.|.|.+ |.|+|+|+ +||..+..... .+++|.|.++..+ |+|.|+|.|+|..|+.
T Consensus 125 v~l~C~~---p~p~i~W~-k~g~~i~~~~~-----~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 125 VLLTCGL---TDKTIKWL-KDGSIISPLNA-----TKNTWNLGNNAKD------PRGTYQCQGAKETSNP 179 (186)
T ss_dssp EEEECSS---SCSCEEEE-ETTEECCCSSC-----CSSCCEEEETTSC------CEEEEEEEESSCEEEE
T ss_pred EEEEeeC---CCCeEEEE-ECCEECcccCC-----CcceEEECCCCcC------cCEEEEEEEEcCcCCc
Confidence 8999998 99999997 58888753221 4678999888765 8999999999999986
No 212
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.16 E-value=2.4e-10 Score=84.44 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=63.4
Q ss_pred eecCceeEeeccccC-cccCCceeee--EEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEecc-CCC-EEEEEccC
Q psy5697 10 LADADTYIIADRSLF-PRPLGYLVGN--IVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRY-EPS-QLGWRFSN 81 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~-p~~~~~~~~~--~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~-P~P-~i~W~~~d 81 (145)
..|+++|.|...... |... ..++. .+.. ......+|.+...++. ....| +.|.|.+.|. |.| +|+|+ +|
T Consensus 90 ~~D~G~Y~C~~~~~~~~~~~-~~~~~~~~l~V-~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~-~~ 166 (222)
T 1q9r_B 90 AEDSATYYCARDHDGYYERF-SYWGQGTLVTV-SAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN-SG 166 (222)
T ss_dssp GGGCEEEEEEECCCSSCCSC-CCBCCCEEEEE-CSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEG-GG
T ss_pred cccCeEEEEEEeccCCcccc-eEeCCceEEEe-ccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEe-cC
Confidence 578889999886532 1100 01111 1111 1122346766554433 22233 8999999996 999 99996 57
Q ss_pred CeEeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 82 NTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 82 g~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
|..+.... ......+| +|.|.+...+ | |.|+|.|+|.+|..
T Consensus 167 g~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~------d-g~y~C~a~n~~~~~ 213 (222)
T 1q9r_B 167 SLSSGVHT-FPAVLQSDLYTLSSSVTVPSSTWP------S-ETVTCNVAHPASST 213 (222)
T ss_dssp TBCTTEEE-EEEEEETTEEEEEEEEEEETTTTT------T-SCCEEEEEEGGGTE
T ss_pred CeEcceEe-ccccccCCcEEEEEEEEECchhcC------C-CeEEEEEEccCCCC
Confidence 76543211 11111233 5777655432 7 99999999999975
No 213
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.16 E-value=3.3e-10 Score=83.27 Aligned_cols=70 Identities=11% Similarity=-0.015 Sum_probs=48.9
Q ss_pred CCEEEEcCCCCCccCeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEc
Q psy5697 46 YPFRIKSAPGGNRTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASN 125 (145)
Q Consensus 46 ~P~~i~~p~~~~~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N 125 (145)
+|.+...+. .+.|.|.+.|.|.|+|+|++ ||+.+. . .+.+|.+.. .. .|+|.|+|+|+|
T Consensus 108 ~P~i~~~~~-----~v~L~C~~~~~p~~~~~W~~-~g~~l~-~-------~~~~i~~~~-~~------~d~G~Y~C~a~N 166 (182)
T 1hnf_A 108 KPKISWTCI-----NTTLTCEVMNGTDPELNLYQ-DGKHLK-L-------SQRVITHKW-TT------SLSAKFKCTAGN 166 (182)
T ss_dssp CCEEEEETT-----TTEEEEECSSCSSCEEEEEE-SSCEEE-E-------ESSCEEEEC-CS------CEEEEEEEEEEC
T ss_pred CCEEEEccC-----cEEEEeEccCCCCCEEEEEE-CCEECC-C-------CCcEEEEec-cc------CCCcEEEEEEEe
Confidence 466555432 38999999999999999984 777761 1 233444432 11 289999999999
Q ss_pred CCCceEEEEEE
Q psy5697 126 EAGVILSRFVH 136 (145)
Q Consensus 126 ~~G~~~s~~v~ 136 (145)
.+|...+..+.
T Consensus 167 ~~~~~~s~~~~ 177 (182)
T 1hnf_A 167 KVSKESSVEPV 177 (182)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCCcEEccee
Confidence 99998655433
No 214
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.8e-11 Score=79.82 Aligned_cols=66 Identities=14% Similarity=0.227 Sum_probs=48.2
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCC---cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHV 137 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v 137 (145)
+.|.|.+. .|.|.|+|+ +||..+....+. .+..+| +|.|.++..+ |+|.|+|.|.|.. .+..+.|
T Consensus 29 v~L~C~~~-~p~~~v~W~-k~g~~~~~~~~~-~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~~~~---~~~~l~V 96 (102)
T 2eo1_A 29 ATLSCEVA-QAQTEVTWY-KDGKKLSSSSKV-RVEAVGCTRRLVVQQAGQA------EAGEYSCEAGGQQ---LSFRLQV 96 (102)
T ss_dssp EEECCBCS-CSSSCCEEE-ETTEECCCCSSE-EEEEETTEEEEEETTCCTT------TCSCEEEEETTEE---CCEEEEE
T ss_pred EEEEEEec-CCCCceEEE-ECCEECCCCCCE-EEEEcCCEEEEEECCCCcc------cCEEEEEEcCCCc---EEEEEEE
Confidence 89999998 899999998 588887654433 333343 7999888665 8999999997643 2345555
Q ss_pred E
Q psy5697 138 K 138 (145)
Q Consensus 138 ~ 138 (145)
.
T Consensus 97 ~ 97 (102)
T 2eo1_A 97 A 97 (102)
T ss_dssp E
T ss_pred e
Confidence 4
No 215
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.16 E-value=2e-10 Score=86.87 Aligned_cols=82 Identities=10% Similarity=0.097 Sum_probs=53.2
Q ss_pred CCEEEEcCCC-CCc--cCeEEEeeEeccCC-CEEEEEccC-CeEeec-----------ccCceEE-eeCC--cEEEcCCC
Q psy5697 46 YPFRIKSAPG-GNR--TRGLELTRQTRYEP-SQLGWRFSN-NTVIAY-----------VKDLRIA-LSNG--SLMFPPFP 106 (145)
Q Consensus 46 ~P~~i~~p~~-~~~--~g~~L~C~a~G~P~-P~i~W~~~d-g~~i~~-----------~~~~~~~-~~~G--sL~i~~~~ 106 (145)
+|.++..|.. ... ..+.|.|.+.|.|. |.|.|++.. |..... ....... ..++ +|.|.++.
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 5677777776 223 33999999999997 999998632 222110 1111111 2222 59998887
Q ss_pred CCCCCCCCCCeEEEEEEEcCCCceEEE
Q psy5697 107 ETGFRPDVHSTVYRCRASNEAGVILSR 133 (145)
Q Consensus 107 ~~~~~~~~d~G~Y~C~A~N~~G~~~s~ 133 (145)
.+ |+|.|.|.|.|..+...+.
T Consensus 229 ~~------DsG~Y~C~~~~~~~~~~g~ 249 (256)
T 3juy_B 229 PE------DFALYYCQVYGASSYTFGQ 249 (256)
T ss_dssp GG------GCSEEEEEECCSSCCEECC
T ss_pred Hh------HCEEEEEEEeeCCCceEcC
Confidence 65 8999999999976655433
No 216
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.16 E-value=8.6e-11 Score=85.40 Aligned_cols=73 Identities=19% Similarity=0.045 Sum_probs=49.7
Q ss_pred CeEEEeeEeccCC-----CEEEEEccCCeEeecccCceEEee------CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 60 RGLELTRQTRYEP-----SQLGWRFSNNTVIAYVKDLRIALS------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 60 g~~L~C~a~G~P~-----P~i~W~~~dg~~i~~~~~~~~~~~------~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
.+.|.|.+.|.|. |.|+|++.++....... ...... +++|.|.++..+ |+|.|+|.|.|..|
T Consensus 19 ~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~-r~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~~~~ 91 (202)
T 3bp6_B 19 SVSLECDFDRRECTELEGIRASLQKVENDTSLQSE-RATLLEEQLPLGKALFHIPSVQVR------DSGQYRCLVICGAA 91 (202)
T ss_dssp CEEEEEEECTTC---CTTEEEEEEECC--CCCBCS-SCEECGGGGGGTEEEEEECSCCGG------GCEEEEEEEEETTE
T ss_pred cEEEEEEecCCCCCCccceEEEEEcCCCcccccCC-ceEEeeccccCCeeEEEECCCCHH------HCcEEEEEEEeCCC
Confidence 3999999999997 99999864544332222 223322 258999988765 89999999999999
Q ss_pred ce-EEEEEEEEe
Q psy5697 129 VI-LSRFVHVKA 139 (145)
Q Consensus 129 ~~-~s~~v~v~~ 139 (145)
.. ....+.|..
T Consensus 92 ~~~~~~~l~V~~ 103 (202)
T 3bp6_B 92 WDYKYLTVKVKA 103 (202)
T ss_dssp EEEEEEEEEEEB
T ss_pred cceEEEEEEecC
Confidence 76 333444444
No 217
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.16 E-value=1.6e-10 Score=84.48 Aligned_cols=110 Identities=15% Similarity=0.190 Sum_probs=64.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCC--EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPS--QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P--~i~W~~~dg~~ 84 (145)
..|++.|.|...+......+... . + ........+|.+...++. .. +..+.|.|.+.|.|+| +|+|++ ||..
T Consensus 82 ~~D~G~Y~C~~~~~~~~~~~~~~-~-l-~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~ 157 (212)
T 1q0x_L 82 TEDEAIYFCALWSNNKLVFGGGT-K-L-TVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKV-DGTP 157 (212)
T ss_dssp GGGCEEEEEEEECSSCEEECCCE-E-E-EECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred ccCCEEEEEEEecCchhhcCCCe-E-E-EEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEE-CCEe
Confidence 57888888887654322111000 0 1 111122357877665554 11 2238999999996554 899985 8888
Q ss_pred eecccC--ceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 85 IAYVKD--LRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 85 i~~~~~--~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+..... ......+| .|.|.+...+ |+|.|+|.|+|..+.
T Consensus 158 l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 158 VTAGMETTQPSKQSNNKYMASSYLTLTARAWE------RHSSYSCQVTHEGHS 204 (212)
T ss_dssp ECTTEEECCCEECTTSCEEEEEEEEEEHHHHT------TCCEEEEEEEETTEE
T ss_pred CCCCeecCCceeCCCCCEEEEEEEEEcHHHcc------CCCcEEEEEEeCCcc
Confidence 753211 01122233 4677655433 799999999998765
No 218
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.15 E-value=1.7e-10 Score=84.72 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=64.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEec-cCCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTR-YEPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G-~P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+.... ..++..+.-.......+|.+...++. .. +..+.|.|.+.| .|+| +|+|++ ||..
T Consensus 81 ~~D~G~Y~C~~~~~~~~---~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~ 156 (216)
T 2xzc_L 81 TGDEADYYCGTWDSSLN---PVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV-DNAL 156 (216)
T ss_dssp GGGCEEEEEEEECTTSC---EEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred cccCEEEEEEEEeCCCc---ceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEE-CCee
Confidence 57888998888654330 01111010001222357877665543 11 223899999999 5555 999984 8887
Q ss_pred eecc-cCce--EEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYV-KDLR--IALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~-~~~~--~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+... .... ....+| +|.|.+...+ |+|.|+|.|+|.....
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 157 QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYE------KHKVYACEVTHQGLSS 205 (216)
T ss_dssp CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHT------TCCEEEEEEECTTCSS
T ss_pred cCCCeeEecCcccCCCCCEEEEEEEEECHHHhC------CCCcEEEEEEcCCCCC
Confidence 6532 0000 111233 5777665433 7999999999997653
No 219
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.15 E-value=5.7e-10 Score=81.63 Aligned_cols=105 Identities=13% Similarity=0.036 Sum_probs=59.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC-cc-CeEEEeeEecc-CCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN-RT-RGLELTRQTRY-EPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~-~~-g~~L~C~a~G~-P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|...+........+. -.|+ .....|.+...+.... .. .+.|.|.+.|. |.|+|+|++ ||..+.
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~-L~V~----~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~-~g~~l~ 152 (193)
T 2if7_A 79 MEDTGSYRAQISTKTSAKLSSYT-LRIL----RQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEA-LGNTLS 152 (193)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEE-EEEE----CCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEE-TTEEEE
T ss_pred cccCceEEEEEEecCCCeEEEEE-EEEE----ccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEe-CCEEcC
Confidence 56777887776443222111111 0011 1112355555543211 22 38999999995 589999985 776642
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFV 135 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v 135 (145)
.++.|.|.... .+.|+|.|+|.|+|.+|.. +..+
T Consensus 153 ---------~~~~l~i~~~~-----~~~d~G~Y~C~a~N~~g~~-s~~~ 186 (193)
T 2if7_A 153 ---------SQPNLTVSWDP-----RISSEQDYTCIAENAVSNL-SFSV 186 (193)
T ss_dssp ---------SSSEEEEEECT-----TTCSCCEEEEEEEETTEEE-EEEE
T ss_pred ---------CCCeEEEEecc-----CcCCCCcEEEEEECCCCcc-cccc
Confidence 23356664221 2237999999999999987 4443
No 220
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.15 E-value=2.1e-11 Score=94.73 Aligned_cols=71 Identities=14% Similarity=0.165 Sum_probs=53.0
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVH 136 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~ 136 (145)
+.|.|.+.|+|.|.|+|+ ++|..+...... .....+++|.|.++..+ |+|.|+|.|.|..|.. .+..+.
T Consensus 141 v~l~C~~~g~p~~~v~W~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~ 213 (334)
T 1ry7_B 141 VRFRCPAAGNPTPSISWL-KNGREFRGEHRIGGIKLRHQQWSLVMESVVPS------DRGNYTCVVENKFGSIRQTYTLD 213 (334)
T ss_dssp EEEECCCCCSSCCEEECC-BTTBCCCTTSSTTCCCCCTTTTEEEECSCCGG------GCCCEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEccCCCCCeEEEE-ECCEECcccccccceecccceEEEEECCCCcc------cCEEEEEEEEeCCCCEEEEEEEE
Confidence 899999999999999997 577776543221 11223458999888665 8999999999999986 333555
Q ss_pred EE
Q psy5697 137 VK 138 (145)
Q Consensus 137 v~ 138 (145)
|.
T Consensus 214 V~ 215 (334)
T 1ry7_B 214 VL 215 (334)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 221
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.15 E-value=1.8e-10 Score=86.34 Aligned_cols=120 Identities=15% Similarity=0.161 Sum_probs=65.1
Q ss_pred eeceee-eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC--ccCeEEEeeEec-cCCC-EEEEE
Q psy5697 4 FHISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN--RTRGLELTRQTR-YEPS-QLGWR 78 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a~G-~P~P-~i~W~ 78 (145)
+.|..+ ..|++.|.|......... ... .......+|.+...+.... ...+.|.|.+.| +|.| +|+|+
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~----~~~----~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~ 155 (248)
T 3pv7_A 84 LRLPGIQLEEAGEYRCEVVVTPLKA----QGT----VQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWE 155 (248)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEE----EEE----EEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEE
T ss_pred EEeCCCCHHHCeEEEEEEEeCCccc----eeE----EEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEE
Confidence 344444 678899999864422111 111 1112223676666655422 223789999999 8999 99998
Q ss_pred ccCCeEeecc----cC----ceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 79 FSNNTVIAYV----KD----LRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 79 ~~dg~~i~~~----~~----~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+ ||+.+... .. ......+| +|.|.+... .|.|.|+|.|+|..|.. .+..+.|.
T Consensus 156 k-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~------~d~g~YtC~a~n~~~~~~~~~~v~l~ 223 (248)
T 3pv7_A 156 K-QTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQE------DPGTVYQCVVRHASLHTPLRSNFTLT 223 (248)
T ss_dssp E-ECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CC------CTTCEEEEEEECTTCSSCEEEEECC-
T ss_pred E-CCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccc------cCCCEEEEEEECCCCCCCcEEEEEEE
Confidence 5 66432110 00 01112233 355544322 27899999999999874 55555554
No 222
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.14 E-value=1.6e-10 Score=83.49 Aligned_cols=78 Identities=14% Similarity=0.223 Sum_probs=52.4
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeE---------eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTV---------IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~---------i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.|.|.|.|+|++.+... +......+....+++|.|.++..+ |+|.|+|.|.|..|..
T Consensus 21 ~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~g~~ 94 (209)
T 1nbq_A 21 PVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTRE------DTGTYTCMVSEEGGNS 94 (209)
T ss_dssp CCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTT------SCSEEEEEEEETTSSC
T ss_pred CEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHH------HCcEEEEEEecCCCCc
Confidence 3899999999999999998643321 111111123334589999988765 8999999999998743
Q ss_pred -E--EEEEEEEeccCC
Q psy5697 131 -L--SRFVHVKADSRI 143 (145)
Q Consensus 131 -~--s~~v~v~~~~~~ 143 (145)
. +..+.|...+.+
T Consensus 95 ~~~~~~~l~V~~~p~~ 110 (209)
T 1nbq_A 95 YGEVKVKLIVLVPPSK 110 (209)
T ss_dssp EECCEEECCEEBCCCC
T ss_pred cceEEEEEEEecCCcC
Confidence 2 334555544444
No 223
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.14 E-value=3.2e-11 Score=94.08 Aligned_cols=90 Identities=18% Similarity=0.154 Sum_probs=65.6
Q ss_pred CCCCCEEEEcCCC-CCc--cCeEEEeeEe-------ccCCCEEEEEccCCeE--eecccCceEEeeCCcEEEcCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNR--TRGLELTRQT-------RYEPSQLGWRFSNNTV--IAYVKDLRIALSNGSLMFPPFPETGF 110 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~--~g~~L~C~a~-------G~P~P~i~W~~~dg~~--i~~~~~~~~~~~~GsL~i~~~~~~~~ 110 (145)
.+..|.|...|.+ .+. ..+.|.|.+. |.|.|.|+|++ +|.. +......+....+++|.|.++..+
T Consensus 15 ~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~-- 91 (339)
T 3o4o_C 15 ARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHK-NDSARTVPGEEETRMWAQDGALWLLPALQE-- 91 (339)
T ss_dssp ---CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEE-SSCCSCCSCCSSSCEEEETTEEEESSBCTT--
T ss_pred chhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEE-CCCCcccCccccccEEeeCCeEEECCCCcc--
Confidence 3456899999887 233 3399999998 99999999985 6665 332223345577899999988765
Q ss_pred CCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 111 RPDVHSTVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
|+|.|+|.|.|..|.. .+..+.|..
T Consensus 92 ----D~G~Y~C~~~n~~g~~~~~~~l~V~~ 117 (339)
T 3o4o_C 92 ----DSGTYVCTTRNASYCDKMSIELRVFE 117 (339)
T ss_dssp ----CCEEEECCEEETTEEEEEEEEEEEEC
T ss_pred ----cCEEEEEEEECCcceEEEEEEEEEEc
Confidence 8999999999999976 444555553
No 224
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.14 E-value=2.7e-11 Score=98.06 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=43.8
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+.|.|.+.|+|+|.|+|++ ||..+ ..+|++. .+..+ |+|.|+|.|+|.+|+. .+..+.|.
T Consensus 388 ~~l~C~~~g~P~p~i~W~~-~g~~~---------~~~g~~~--~v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~ 448 (450)
T 1z7z_I 388 QTPMCQAWGNPLPELKCLK-DGTFP---------LPIGESV--TVTRD------LEGTYLCRARSTQGEVTREVTVNVL 448 (450)
T ss_dssp ECCCCCCEEESCCEEEEEE-TTTEE---------CCTTSCE--ECCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEecccCCCCcEEEEE-CCccc---------CCCCCeE--eEehh------hCeEEEEEEEeCCCceeEEEEEEEE
Confidence 8999999999999999985 65432 2344433 23322 8999999999999998 34455554
No 225
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.14 E-value=4.5e-11 Score=91.28 Aligned_cols=70 Identities=11% Similarity=0.052 Sum_probs=53.3
Q ss_pred CeEEEeeEeccCC-CEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCe-EEEEEEEcCCCceEEEEEEE
Q psy5697 60 RGLELTRQTRYEP-SQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHST-VYRCRASNEAGVILSRFVHV 137 (145)
Q Consensus 60 g~~L~C~a~G~P~-P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G-~Y~C~A~N~~G~~~s~~v~v 137 (145)
.+.|.|.+.| |. |.|+|+++||..+.... ......+++|.|.++..+ |+| .|+|.|.|..|...+..+.+
T Consensus 108 ~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~-~~~~~~~~~L~i~~v~~~------d~G~~Y~C~a~n~~~~~~s~~~~l 179 (290)
T 2o26_X 108 DALVRCPLTD-PQVSQYSLIECDGKSLPTDL-TFVPNPKAGITIKNVKRA------YHRLCVRCAAQRDGTWLHSDKFTL 179 (290)
T ss_dssp CEEECCCBSC-CSCEEEEEEETTSCCCCTTC-EEEEETTTEEEEESCCGG------GTTCEEEEEEEETTEEEECCCEEE
T ss_pred eEEEeCcCCC-CCCceEEEEeCCCcCCCCCC-ceeeCCCCCEEEecccHH------HCCCEEEEEEEECCceEEeEEEEE
Confidence 3999999997 88 99999767888875432 224445679999988665 899 99999999977766543333
No 226
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.13 E-value=1.7e-11 Score=89.83 Aligned_cols=79 Identities=10% Similarity=0.146 Sum_probs=52.0
Q ss_pred CCCEEEEcCCC-CCcc--CeEEEeeEecc-CC-CEEEEEccCCeEeecccCceEE-------eeCCcEEEcCCCCCCCCC
Q psy5697 45 HYPFRIKSAPG-GNRT--RGLELTRQTRY-EP-SQLGWRFSNNTVIAYVKDLRIA-------LSNGSLMFPPFPETGFRP 112 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~--g~~L~C~a~G~-P~-P~i~W~~~dg~~i~~~~~~~~~-------~~~GsL~i~~~~~~~~~~ 112 (145)
.+|.+...++. .... .+.|.|.+.|. |+ |.|+|++ ||..+......... ...++|.|.++..+
T Consensus 112 ~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~---- 186 (212)
T 1nfd_E 112 SSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKA-NGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWK---- 186 (212)
T ss_dssp BCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEE-TTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHH----
T ss_pred CCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEE-CCeEcCCCeecCCceecCCCceEEEEEEEchhhcC----
Confidence 56776665544 2222 38999999998 55 7999984 88887532111001 11245777766544
Q ss_pred CCCCeEEEEEEEcCCCce
Q psy5697 113 DVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|+|..+..
T Consensus 187 --d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 187 --SHNRVSCQVTHEGETV 202 (212)
T ss_dssp --TCSCEEEEEECTTTTC
T ss_pred --CCCeEEEEEEeCCceE
Confidence 7999999999998864
No 227
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.13 E-value=1.9e-10 Score=84.03 Aligned_cols=109 Identities=11% Similarity=0.163 Sum_probs=64.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC-cc-CeEEEeeEeccCCC--EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN-RT-RGLELTRQTRYEPS--QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~-~~-g~~L~C~a~G~P~P--~i~W~~~dg~~ 84 (145)
..|++.|.|...+..... ++..+.-.......+|.+...++. .. .. .+.|.|.+.|.|+| +|+|+ +||..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~----~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~-k~g~~ 154 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWT----FGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWK-VDGSE 154 (213)
T ss_dssp GGGCSEEEEEECSSSSCE----ECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEE-ETTEE
T ss_pred cccCEEEEEecccCCceE----EcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEE-ECCcc
Confidence 678999999886543221 111111111233567877776665 11 22 29999999997754 99997 48888
Q ss_pred eeccc-Cc--eEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 85 IAYVK-DL--RIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 85 i~~~~-~~--~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+.... .. .....+| +|.|.+...+ |.|.|+|.|+|+...
T Consensus 155 l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~------d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 155 KRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYE------RHNLYTCEVTHKTST 202 (213)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEEETTCS
T ss_pred cCCceEeccCceeCCCCcEEEEEEEEeCHHHhc------cCCeEEEEEEecccC
Confidence 75321 00 0112334 3555443222 699999999999654
No 228
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.13 E-value=8.3e-11 Score=88.14 Aligned_cols=87 Identities=9% Similarity=-0.030 Sum_probs=57.2
Q ss_pred CCCCEEEEcCCCCC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCce-EEeeCC--cEEEcCCCCCCCCCCCCCeE
Q psy5697 44 EHYPFRIKSAPGGN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLR-IALSNG--SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 44 ~~~P~~i~~p~~~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~-~~~~~G--sL~i~~~~~~~~~~~~d~G~ 118 (145)
..+|.|...|...+ +..++|.|.+.| |.|.|+|+| ||..+....... ....++ +|.|.++..+ |+|.
T Consensus 7 ~~~P~i~~~p~~~v~~G~~vtL~C~~~~-~~~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~ 78 (218)
T 1uct_A 7 FPMPFISAKSSPVIPLDGSVKIQCQAIR-EAYLTQLMI-IKNSTYREIGRRLKFWNETDPEFVIDHMDAN------KAGR 78 (218)
T ss_dssp SCCCCEEESSCSEEETTCCEEEEECCCT-TCSEEEEEE-EETTEEEECSEECC----CCCEEEECSCCGG------GCEE
T ss_pred CCCCEEEecCCCccCCCCCEEEEEEcCC-CCCEEEEEE-CCCcccccccccCCCCcceeeEEEEcccccc------cCEE
Confidence 45678877776533 233999999998 789999985 665543221111 112345 8999988765 8999
Q ss_pred EEEEEEcCCCce-EEEEEEEE
Q psy5697 119 YRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 119 Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|.|..|.. .+..+.|.
T Consensus 79 Y~C~a~n~~~~~~~s~~~~l~ 99 (218)
T 1uct_A 79 YQCQYRIGHYRFRYSDTLELV 99 (218)
T ss_dssp EEEEEEETTTEEEECCCEEEE
T ss_pred EEEEEEcCCCceeecCCEEEE
Confidence 999999998743 44434433
No 229
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.13 E-value=4.7e-10 Score=87.03 Aligned_cols=113 Identities=15% Similarity=0.114 Sum_probs=67.9
Q ss_pred eeceee-eecCceeEeecccc-----CcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC--ccCeEEEeeEeccCCCEE
Q psy5697 4 FHISTL-LADADTYIIADRSL-----FPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN--RTRGLELTRQTRYEPSQL 75 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a~G~P~P~i 75 (145)
+.|..+ ..|++.|.|..... +-.....+. ..+ .....+|.+...|.... +..+.|.|.+.+ |++.+
T Consensus 76 L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~--l~V---~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~-~~~~~ 149 (316)
T 3vh8_G 76 FNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVV--IMV---TGNHRKPSLLAHPGPLVKSGERVILQCWSDI-MFEHF 149 (316)
T ss_dssp EEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEE--EEE---ECSSCCCEEEEESCSEEETTCCEEEEEEESS-CCSEE
T ss_pred EEECCCCcccCeEEEEEEEcCCCCcceecCCCcEE--EEE---ecCCCCCeEEecCCCccCCCCeEEEEEcCCC-CCcEE
Confidence 344444 67889999975421 111111122 011 11234577777666533 233999999955 77899
Q ss_pred EEEccCCeEeecccCceE-E--eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 76 GWRFSNNTVIAYVKDLRI-A--LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 76 ~W~~~dg~~i~~~~~~~~-~--~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.|++ +|..+........ . ..+++|.|.++..+ |+|.|+|.|.|..|.
T Consensus 150 ~w~k-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 150 FLHK-EGISKDPSRLVGQIHDGVSKANFSIGPMMLA------LAGTYRCYGSVTHTP 199 (316)
T ss_dssp EEEE-TTCCSCCEEEECEEETTEEEEEEEECSCCGG------GCEEEEEEEECTTCT
T ss_pred EEEE-CCCccccceeeeeecCCCceEEEEECCCChh------hCceEEEEEecCCCC
Confidence 9975 6655432111111 1 23568999888765 899999999999985
No 230
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.13 E-value=1.9e-10 Score=86.74 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=49.7
Q ss_pred CeEEEeeE---eccCCCEEEEEccCCeEeec--------------------ccCceEE-----eeCCcEEEcCCCCCCCC
Q psy5697 60 RGLELTRQ---TRYEPSQLGWRFSNNTVIAY--------------------VKDLRIA-----LSNGSLMFPPFPETGFR 111 (145)
Q Consensus 60 g~~L~C~a---~G~P~P~i~W~~~dg~~i~~--------------------~~~~~~~-----~~~GsL~i~~~~~~~~~ 111 (145)
.+.|.|.+ .|.|.|.|+|++.++..... ....... ..+++|.|.++..+
T Consensus 135 ~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~--- 211 (268)
T 3mj6_A 135 TTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKES--- 211 (268)
T ss_dssp CEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGG---
T ss_pred cEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChh---
Confidence 38999999 78899999998755432110 0000111 23568999988765
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 112 PDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 112 ~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
|+|.|+|.|.|..|.. .+..+.|
T Consensus 212 ---D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 212 ---DQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp ---GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ---hCeEEEEEEEcCCceEEEEEEEEE
Confidence 8999999999999986 3445555
No 231
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.13 E-value=4.1e-10 Score=93.06 Aligned_cols=109 Identities=11% Similarity=0.075 Sum_probs=64.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCcc--CeEEEeeEecc-CCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRT--RGLELTRQTRY-EPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~-P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+..-.....+. . ........+|.+...++. .... .+.|.|.+.|. |.| +|+|++ ||..
T Consensus 187 ~~d~G~Y~C~a~n~~~~~~~~~~---~-~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k-~g~~ 261 (523)
T 2rcj_C 187 WKSHRSYSCQVTHEGSTVEKTVA---P-TECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNS-GALT 261 (523)
T ss_pred cCCCceEEEEEEecCccccccee---e-eecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEec-CCcc
Confidence 35777888877554322111111 0 011223456665533332 2223 39999999997 888 899974 7765
Q ss_pred eecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+...........+| +|.|.++..+ | |.|+|.|+|..|..
T Consensus 262 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 262 SGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSNT 306 (523)
T ss_pred cceEeCCcEecCCCcEEEEEEEEechhhcC------C-ceEEEEEEeCCCCc
Confidence 43211111222334 7888776543 8 99999999999986
No 232
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.13 E-value=1.2e-10 Score=86.74 Aligned_cols=74 Identities=11% Similarity=-0.012 Sum_probs=48.5
Q ss_pred EEEEcCCC-CCc--cCeEEEeeEeccCCCEEEEEccC-CeE---ee--------cccCceEEe---e--CCcEEEcCCCC
Q psy5697 48 FRIKSAPG-GNR--TRGLELTRQTRYEPSQLGWRFSN-NTV---IA--------YVKDLRIAL---S--NGSLMFPPFPE 107 (145)
Q Consensus 48 ~~i~~p~~-~~~--~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~--------~~~~~~~~~---~--~GsL~i~~~~~ 107 (145)
.+...|.+ ... ..+.|.|.+.|.|.|.|+|++.+ |.. +. ...+..... . .++|.|.++..
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 208 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH
Confidence 55555655 222 33999999999999999998743 211 10 001111211 1 24799988876
Q ss_pred CCCCCCCCCeEEEEEEEcCC
Q psy5697 108 TGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~ 127 (145)
+ |+|.|+|.|+|..
T Consensus 209 ~------D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 209 G------DSATYFCAAIDTN 222 (238)
T ss_dssp G------GCEEEEEEEEETT
T ss_pred H------HCEEEEEEEeeCC
Confidence 5 8999999999984
No 233
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.12 E-value=1.1e-10 Score=89.93 Aligned_cols=70 Identities=19% Similarity=0.278 Sum_probs=54.9
Q ss_pred CeEEEeeE------eccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEE-cCCCceE-
Q psy5697 60 RGLELTRQ------TRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRAS-NEAGVIL- 131 (145)
Q Consensus 60 g~~L~C~a------~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~-N~~G~~~- 131 (145)
.+.|.|.+ .|+|.|.|+|+ +||..+.... .+....+++|.|.++..+ |+|.|+|.|. |..|...
T Consensus 120 ~v~l~C~~~~~~~~~g~p~~~i~W~-k~~~~l~~~~-~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~~n~~g~~~~ 191 (315)
T 1itb_B 120 DGGLVCPYMEFFKNENNELPKLQWY-KDCKPLLLDN-IHFSGVKDRLIVMNVAEK------HRGNYTCHASYTYLGKQYP 191 (315)
T ss_dssp CEEEECSSCTTTCTTTTCCCCCEEE-ETTEECCCCS-SSEEEETTEEEESSCCGG------GCEEEEEEEEEEETTEEEE
T ss_pred CeEEEEecccccccCCCCCCEEEEE-ECCEECCCcc-ceEeecCceEEEEeceeh------hCcEEEEEEEcCCCCcEEE
Confidence 38999998 99999999997 5888875432 335566889999988765 8999999999 8999874
Q ss_pred -EEEEEE
Q psy5697 132 -SRFVHV 137 (145)
Q Consensus 132 -s~~v~v 137 (145)
+..+.+
T Consensus 192 ~~~~~~~ 198 (315)
T 1itb_B 192 ITRVIEF 198 (315)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 344444
No 234
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.12 E-value=2.3e-10 Score=82.77 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=52.4
Q ss_pred eEEEeeEec--cCCCEEEEEccCCeEee---------cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 61 GLELTRQTR--YEPSQLGWRFSNNTVIA---------YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 61 ~~L~C~a~G--~P~P~i~W~~~dg~~i~---------~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+.|.|.+.+ .|.|.|+|++ ++..+. ...+...+..+|+|.|.++..+ |+|.|+|.|.|..|.
T Consensus 14 v~L~c~~~~~~~~~~~i~W~k-~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~------D~G~Y~C~~~n~~g~ 86 (176)
T 1hng_A 14 INLNIPNFQMTDDIDEVRWER-GSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRD------DSGTYNVTVYSTNGT 86 (176)
T ss_dssp EEECCTTCCCCTTEEEEEEEE-TTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGG------GCEEEEEEEEETTCC
T ss_pred EEEcCCCCCcccccccEEEEe-CCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccc------cCEEEEEEEEeCCCC
Confidence 899996544 7788999985 665442 1122345567899999988765 899999999999999
Q ss_pred e-EEEEEEEE
Q psy5697 130 I-LSRFVHVK 138 (145)
Q Consensus 130 ~-~s~~v~v~ 138 (145)
. .+..+.|.
T Consensus 87 ~~~~~~~~l~ 96 (176)
T 1hng_A 87 RILNKALDLR 96 (176)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 7 55555554
No 235
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.12 E-value=1.4e-10 Score=87.32 Aligned_cols=110 Identities=12% Similarity=0.149 Sum_probs=65.0
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEecc-CC-CEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRY-EP-SQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~-P~-P~i~W~~~dg~~ 84 (145)
..|++.|.|...+..+.. ++..+.........+|.+...++. .. ...+.|.|.+.|. |+ ++|+|++ ||..
T Consensus 122 ~~D~G~Y~C~a~n~~~~~----~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~ 196 (254)
T 2c1o_A 122 AEDLGIYYCVQGSHFPPT----FGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSE 196 (254)
T ss_dssp GGGCSEEEEEECSSSSCE----EBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-SSSE
T ss_pred cccCEEEEEEEEcCcceE----ecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEE-CCCc
Confidence 678889999886543322 221111111222346776665544 11 1238999999995 44 4699985 7877
Q ss_pred eecc-cCceE--Eee------CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYV-KDLRI--ALS------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~-~~~~~--~~~------~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+... ..... ... .++|.|.++..+ |+|.|+|.|+|.....
T Consensus 197 l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 197 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTSTS 245 (254)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEECTTCSS
T ss_pred ccCcceeccccccCCCCcEEEEEEEEecccccc------CCCeEEEEEEcCCCCC
Confidence 6532 00000 011 236888776544 7999999999997763
No 236
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.12 E-value=3.4e-11 Score=87.72 Aligned_cols=76 Identities=11% Similarity=0.141 Sum_probs=54.5
Q ss_pred CCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCc-eEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 45 HYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDL-RIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 45 ~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~-~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+|.|...|......| +.|.|.+.|.|. .|+|+| ||..+...... .....+++|.|.++..+ |+|.|+|
T Consensus 4 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C 75 (198)
T 1ugn_A 4 PKPTLWAEPGSVITQGSPVTLRCQGGQETQ-EYRLYR-EKKTAPWITRIPQELVKKGQFPIPSITWE------HTGRYRC 75 (198)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECCTTCC-CEEEEE-SSSCCHHHHTSCHHHHTTTEEEESSCCGG------GCEEEEE
T ss_pred CCCeEeccCCCcccCCCcEEEEEEecCCCc-EEEEEE-CCccccccccccccCCcccEEEECCCCHH------HCeEEEE
Confidence 4677777776533333 999999999886 799985 77665321111 11235678999988765 8999999
Q ss_pred EEEcCC-C
Q psy5697 122 RASNEA-G 128 (145)
Q Consensus 122 ~A~N~~-G 128 (145)
.|.|.. |
T Consensus 76 ~a~n~~~g 83 (198)
T 1ugn_A 76 YYGSDTAG 83 (198)
T ss_dssp EEEETTTE
T ss_pred EEECCCCC
Confidence 999998 6
No 237
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.12 E-value=6.1e-10 Score=83.15 Aligned_cols=110 Identities=12% Similarity=0.049 Sum_probs=67.1
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCcc--CeEEEeeEeccCC-CE----EEEEccCC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRT--RGLELTRQTRYEP-SQ----LGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~--g~~L~C~a~G~P~-P~----i~W~~~dg 82 (145)
..|++.|.|............+. ..+ .....+|.+...+...... .+.|.|.+.|.|. |. ++|+ ++|
T Consensus 140 ~~d~G~Y~C~~~n~~~~~~~~~~--l~V---~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~-~~~ 213 (262)
T 3rjd_A 140 ISHNGTYHCSGMGKHRYTSAGIS--VTV---KELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFY-MGS 213 (262)
T ss_dssp GGGCEEEEEEEESSSEEEEECEE--EEE---ECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEE-ETT
T ss_pred hhhCEEEEEEEeCCCCccccceE--EEe---ccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEE-eCC
Confidence 56777888877554321111111 010 1112356666666432323 3899999999997 75 6776 477
Q ss_pred eEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE--EEEEEE
Q psy5697 83 TVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHV 137 (145)
Q Consensus 83 ~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~--s~~v~v 137 (145)
..+... ..+++|.|.++..+ |+|.|+|.|.|..|+.. |..+.|
T Consensus 214 ~~~~~~------~~~~~L~i~~v~~~------d~G~Y~C~a~n~~G~~~~~s~~~~l 258 (262)
T 3rjd_A 214 KTLRGR------NTSSEYQILTARRE------DSGLYWCEAATEDGNVLKRSPELEL 258 (262)
T ss_dssp EEEEEE------ESCCEEEESSCCGG------GCEEEEEEEEETTSSCEEECCCEEE
T ss_pred cEeccc------CCCceEEEEEechh------hCeEEEEEEEcccCceEEecCCeEE
Confidence 765421 24568999887655 89999999999999863 334444
No 238
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.11 E-value=1.1e-10 Score=80.66 Aligned_cols=76 Identities=17% Similarity=0.139 Sum_probs=52.8
Q ss_pred CeEEEeeEec-cCCCEEEEEccCCe---EeecccCce-EEe-eCC----cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 60 RGLELTRQTR-YEPSQLGWRFSNNT---VIAYVKDLR-IAL-SNG----SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 60 g~~L~C~a~G-~P~P~i~W~~~dg~---~i~~~~~~~-~~~-~~G----sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.+.|+|.|.| .|+|+|+|.|.+|+ ++......+ ... .+. .|.|.++..+ |+|.|+|.|.|..|.
T Consensus 31 ~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~s------DsG~YrCsAn~~~g~ 104 (122)
T 1xau_A 31 LFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLS------DNGSYSCSTNFNSQV 104 (122)
T ss_dssp CEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGG------GCEEEEEEEEETTEE
T ss_pred eEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEc------CCccEEEEeeCCCCc
Confidence 3899999965 78999999987763 332211111 111 122 6888888766 899999999999999
Q ss_pred eEEEEEEEEecc
Q psy5697 130 ILSRFVHVKADS 141 (145)
Q Consensus 130 ~~s~~v~v~~~~ 141 (145)
+.|..+++..-+
T Consensus 105 ieSHs~ti~V~~ 116 (122)
T 1xau_A 105 INSHSVTIHVRE 116 (122)
T ss_dssp EECCCEEEEEC-
T ss_pred eeeeEEEEEEEe
Confidence 977776666544
No 239
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.11 E-value=7.5e-11 Score=89.68 Aligned_cols=113 Identities=10% Similarity=-0.095 Sum_probs=68.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCC-EEEEcCCC-CC--ccCeEEEeeEeccCC--CEEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYP-FRIKSAPG-GN--RTRGLELTRQTRYEP--SQLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P-~~i~~p~~-~~--~~g~~L~C~a~G~P~--P~i~W~~~dg~ 83 (145)
..|++.|.|...+........+. .....+| .++..+.+ .. +..+.|.|.+.| |. |.|+|++.+|.
T Consensus 60 ~~d~G~Y~C~~~n~~~~~~~~~~--------l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~ 130 (292)
T 4dkd_C 60 FQNTGTYRCTEPGDPLGGSAAIH--------LYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGR 130 (292)
T ss_dssp GGGCSCEEECCCC----CCEEEC--------CEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGC
T ss_pred cccCEEEEEEEccCCCCcceEEE--------EEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCC
Confidence 56778888877553322211111 1111222 23444443 22 233899999998 65 88999876676
Q ss_pred EeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 84 VIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 84 ~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.+.... ......+++|.|.++..+ |+|.|+|.|.|..|...+..+.|.
T Consensus 131 ~~~~~~-~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~s~~~~l~ 178 (292)
T 4dkd_C 131 PLMRHT-NYSFSPWHGFTIHRAKFI------QSQDYQCSALMGGRKVMSISIRLK 178 (292)
T ss_dssp CCCSSC-CEECCSSSCCEETTCCGG------GCSEEEEEECSTTSCEECCCEEEE
T ss_pred ccccCC-cccccCCceEEECCCCHH------HCeEEEEEEEeCCCceeEEEEEEE
Confidence 664332 234445677999887655 899999999999997755444433
No 240
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.11 E-value=4.2e-10 Score=85.39 Aligned_cols=114 Identities=8% Similarity=-0.053 Sum_probs=68.6
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCC-EEEEcCCC-CC--ccCeEEEeeEeccCCCE-EEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYP-FRIKSAPG-GN--RTRGLELTRQTRYEPSQ-LGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P-~~i~~p~~-~~--~~g~~L~C~a~G~P~P~-i~W~~~dg~~ 84 (145)
..|++.|.|...+........+. + ....+| .++..+.. .. +..+.|.|.+.|.|.|. |+|++.+|..
T Consensus 60 ~~d~G~Y~C~~~~~~~~~~~~~~---l-----~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~ 131 (289)
T 3ejj_X 60 FKNTGTYRCTELEDPMAGSTTIH---L-----YVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQ 131 (289)
T ss_dssp GGGCEEEEEECCC-----CEEEE---E-----EECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEE
T ss_pred cccCEEEEEEEeccCCcceeEEE---E-----EEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCee
Confidence 57888888886543222211111 1 111122 14555543 22 23399999999988876 9998778877
Q ss_pred eecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEE--EEEEE
Q psy5697 85 IAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR--FVHVK 138 (145)
Q Consensus 85 i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~--~v~v~ 138 (145)
+.... ......+++|.|.++..+ |+|.|+|.|.|..+...+. .+.|.
T Consensus 132 ~~~~~-~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 132 VLRKT-VYFFSPWRGFIIRKAKVL------DSNTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp CCTTC-CEEEETTTEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cCCCc-cEEECCCCCEEEeecccc------cCEEEEEEEEeCCCccccccEEEEEE
Confidence 75433 334556789999988665 8999999999543333333 44444
No 241
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.11 E-value=2.8e-10 Score=86.20 Aligned_cols=60 Identities=18% Similarity=0.183 Sum_probs=44.4
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+.|.|.+.|+|.|.|+|++ +|. ....+|++.. +..+ |+|.|+|.|+|.+|+. .+..+.|+
T Consensus 203 ~~l~C~~~g~P~p~i~W~~-~~~---------~~~~~g~~~~--v~~~------d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 203 QTPMCQAWGNPLPELKCLK-DGT---------FPLPIGESVT--VTRD------LEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp ECCCCCCEEESCCEEEEEE-TTT---------EECCTTSCEE--CCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEeECccCCCCeEEEEE-CCc---------ccCCCCcEEE--eehh------hCeEEEEEEECCCCcEEEEEEEEEe
Confidence 8999999999999999986 554 2234565543 3322 8999999999999987 34455554
No 242
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.11 E-value=3.3e-10 Score=87.35 Aligned_cols=86 Identities=12% Similarity=0.063 Sum_probs=54.3
Q ss_pred CCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEcc-CCeEeec------------ccCceEEee--CCcEEEcCCCC
Q psy5697 46 YPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFS-NNTVIAY------------VKDLRIALS--NGSLMFPPFPE 107 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~-dg~~i~~------------~~~~~~~~~--~GsL~i~~~~~ 107 (145)
+|.+.+.|.. .... .+.|.|.+.|.| |.|+|++. +|..+.. ..+...... .++|.|.++..
T Consensus 162 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 240 (282)
T 1qok_A 162 ENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEA 240 (282)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCCh
Confidence 4566666655 2333 399999999999 99999874 4543310 111111112 23799988876
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceE--EEEEEEE
Q psy5697 108 TGFRPDVHSTVYRCRASNEAGVIL--SRFVHVK 138 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~G~~~--s~~v~v~ 138 (145)
+ |+|.|.|.|.|..+... ...+.|.
T Consensus 241 ~------DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 241 E------DAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp G------GCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred h------HCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 5 89999999999754443 2344444
No 243
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.10 E-value=5.3e-10 Score=80.83 Aligned_cols=114 Identities=11% Similarity=0.038 Sum_probs=63.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC-ccC-eEEEee-EeccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN-RTR-GLELTR-QTRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~-~~g-~~L~C~-a~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|...+.......... ......+|.+...+.. .. ..+ ..+.|. +.|.|+|.+.|.+ ++..+
T Consensus 92 ~~D~G~Y~C~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~-~~~~~ 163 (225)
T 4fmk_A 92 VEDEGNYTCEFATFPNGTRRGVT-------WLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWIS-SLGGE 163 (225)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEE-------EEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEEC-SSCCE
T ss_pred HHHCcceEEEEEeCCCcceeeee-------eeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEE-CCccc
Confidence 67888888876443222110000 1112234444444433 22 222 455554 6788999999975 44433
Q ss_pred ecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 86 AYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 86 ~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.... ......+| +|.|.++..+ |.|.|+|.|+|++|.. .+..++|.
T Consensus 164 ~~~~-~~~~~~~~~~~~~s~L~i~~~~~~------d~g~YtC~a~N~~~~~~~~~~v~l~ 216 (225)
T 4fmk_A 164 AKDT-QEPGIQAGTVTIISRYSLVPVGRA------DGVKVTCRVEHESFEEPILLPVTLS 216 (225)
T ss_dssp EEEE-EEECSSTTCEEEEEEEEECCCGGG------TTCEEEEEEECTTCSSCEEEEEECC
T ss_pred cCCc-ceEEecCCCEEEEEEEEEeeCCHH------HCCEEEEEEEcCCCCeEEEEEEEEE
Confidence 2211 11223343 4888776544 8999999999999876 55566553
No 244
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.09 E-value=3e-10 Score=86.19 Aligned_cols=84 Identities=11% Similarity=0.072 Sum_probs=57.0
Q ss_pred CEEEEcCCC--CCccC--eEEEeeEeccCCC--EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 47 PFRIKSAPG--GNRTR--GLELTRQTRYEPS--QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 47 P~~i~~p~~--~~~~g--~~L~C~a~G~P~P--~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
|+.+..|.. .+..| +.|.|.+ |.|.| .|+|++.++ .+ ........++.|.|.++..+ |+|.|.
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~-~l---~~~~~~~~~~~L~I~~v~~~------d~G~Y~ 75 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDT-SL---GAVQSDTGRSVLTVRNASLS------AAGTRV 75 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTT-TT---CCEEEESSEEEEEECSCCGG------GCEEEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccc-cc---CcEEecCCccEEEECccCcc------cCceEE
Confidence 555554433 22233 9999999 99999 999986543 22 11222333447999988765 899999
Q ss_pred EEEEcCCCce-EEEEEEEEecc
Q psy5697 121 CRASNEAGVI-LSRFVHVKADS 141 (145)
Q Consensus 121 C~A~N~~G~~-~s~~v~v~~~~ 141 (145)
|.|.|..|+. .+..++|...+
T Consensus 76 C~a~n~~~~~~~~~~ltV~~~P 97 (210)
T 1gsm_A 76 CVGSCGGRTFQHTVQLLVYAFP 97 (210)
T ss_dssp EEEEETTEEEEEEEEEEEEBCC
T ss_pred EEEEeCCCceEEEEEEEEEecC
Confidence 9999999886 44567666544
No 245
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.09 E-value=3.6e-10 Score=83.55 Aligned_cols=119 Identities=13% Similarity=0.203 Sum_probs=68.0
Q ss_pred eceee-eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEecc-C-CCEEEEE
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRY-E-PSQLGWR 78 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~-P-~P~i~W~ 78 (145)
+|..+ ..|++.|.|..........+... ...+ .....+|.+...+++ .. +..+.|.|.+.|. | .|+|+|+
T Consensus 97 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~l~V---~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~ 172 (237)
T 3sob_L 97 TISSLQPEDFATYYCQQSYTTPPTFGQGT-KVEI---KRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWK 172 (237)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCE-EEEE---ECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EECCCChhhCeEEEEeeccCCceEEcCcE-EEEE---ecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEE
Confidence 33333 67888999987553321111111 1111 114567877666554 11 2239999999984 4 5899998
Q ss_pred ccCCeEeeccc-C--ceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEE
Q psy5697 79 FSNNTVIAYVK-D--LRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRF 134 (145)
Q Consensus 79 ~~dg~~i~~~~-~--~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~ 134 (145)
+||..+.... . ......+| +|.|.+...+ |.|.|+|.|+|+.... ....
T Consensus 173 -k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 173 -VDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYE------KHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp -ETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHT------TCCEEEEEEECTTCSSCEEEE
T ss_pred -ECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHcc------CCCcEEEEEeeCCCCCceeee
Confidence 4887765310 0 00111233 3666554333 7999999999997654 4433
No 246
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.09 E-value=3.4e-10 Score=82.71 Aligned_cols=77 Identities=10% Similarity=0.119 Sum_probs=50.1
Q ss_pred CEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeE---eecc--------cCceEEeeC---CcEEEcCCCCC
Q psy5697 47 PFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTV---IAYV--------KDLRIALSN---GSLMFPPFPET 108 (145)
Q Consensus 47 P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~~--------~~~~~~~~~---GsL~i~~~~~~ 108 (145)
|.+.+.|.+ .+ +..+.|.|.+.|.|.|.|+|++.+ |.. +... ........+ .+|.|.++..+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 344555554 22 233999999999999999998742 221 1100 111222222 27999988765
Q ss_pred CCCCCCCCeEEEEEEEcCCCc
Q psy5697 109 GFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
|+|.|+|.|.|..|.
T Consensus 82 ------D~G~Y~C~~~~~~~~ 96 (213)
T 3nl4_L 82 ------DAATYYCQSTYENPT 96 (213)
T ss_dssp ------GCEEEEEEECCSSTT
T ss_pred ------HCEEEEEecCCCCce
Confidence 899999999998874
No 247
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.09 E-value=3.7e-10 Score=87.88 Aligned_cols=113 Identities=12% Similarity=-0.012 Sum_probs=61.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCC--EEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPS--QLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P--~i~W~~~dg~~i 85 (145)
..|++.|.|...+.........++..+.-.......+|.+. .|......| +.|.|.+.|.|+| +|+|++ ||..+
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~-~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k-~g~~l 160 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFK-NGNEL 160 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE-CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee-ccccccCCCCEEEEEEEEeCccCCCcEEEEEE-CCEEc
Confidence 67888998887554322100001000000011123345543 444333333 8999999999987 999984 88887
Q ss_pred ecccCceEE-eeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 86 AYVKDLRIA-LSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 86 ~~~~~~~~~-~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
......... ..+| +|.|.... ..|.|.|+|.|+|..|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~------~d~~g~Y~C~a~n~~~~~ 206 (327)
T 2wng_A 161 SDFQTNVDPVGESVSYSIHSTAKVVLTR------EDVHSQVICEVAHVTLQG 206 (327)
T ss_dssp CCEEEEEECSSCCSCEEEEEEEEEECCT------TGGGCEEEEEEECTTSCS
T ss_pred cccccccccccCCCceEEEEEEEEechh------cCcCceEEEEEeccccCC
Confidence 532211010 1223 35554322 225799999999998863
No 248
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.09 E-value=7.5e-10 Score=81.08 Aligned_cols=108 Identities=17% Similarity=0.104 Sum_probs=62.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEecc-CCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRY-EPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~-P~P-~i~W~~~dg~~ 84 (145)
..|+++|.|...+.+....+ . . +.. ......+|.+...++. ....| +.|.|.+.|. |.| +|+|+ ++|..
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~-~--~-l~V-~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~-~~~~~ 160 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQG-T--L-VTV-SAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN-SGSLS 160 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCC-E--E-EEE-CCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEG-GGTBC
T ss_pred cccCEEEEEEEecCcccccc-e--E-EEe-ccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEe-eCCcc
Confidence 67888998888653211110 0 1 111 1122356766555433 33333 8999999998 888 99996 46654
Q ss_pred eecccCceEE-----eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYVKDLRIA-----LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~~~~~~~-----~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+......... ...++|.|.+.... | |.|+|.|+|.+|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------~-g~Y~C~a~n~~~~~ 204 (210)
T 3d9a_H 161 SGVHTFPAVLQSDLYTLSSSVTVPSSTWP------S-ETVTCNVAHPASST 204 (210)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEEGGGTT------T-SCCEEEEEEGGGTE
T ss_pred cceEEcCCccCCCcEEEEEEEEEcHHHcC------C-CcEEEEEEeCCCCc
Confidence 3211111111 11235777665321 5 99999999999985
No 249
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.09 E-value=6.4e-10 Score=85.37 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=61.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCC--------CCCCCEEEEcCCC-CCc--cCeEEEeeEeccC--CCEEE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSE--------NEHYPFRIKSAPG-GNR--TRGLELTRQTRYE--PSQLG 76 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P--~P~i~ 76 (145)
..|.+.|.|...+......+... ...+..... ...++.++..|.+ ... ..+.|.|.+.|.| .|.|+
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~-~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 169 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGT-KVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIH 169 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCE-EEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred hhhCEEEEEEEecCCcccccCCE-EEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEE
Confidence 67888999988664322111101 001111100 0123455566655 223 3399999999988 59999
Q ss_pred EEccC-CeEe---e-------------cccCceEEeeC-----CcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 77 WRFSN-NTVI---A-------------YVKDLRIALSN-----GSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 77 W~~~d-g~~i---~-------------~~~~~~~~~~~-----GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
|++.+ |... . ..++......+ .+|.|.++..+ |+|.|+|.|.|..
T Consensus 170 W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 170 WVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAE------DTAVYYCARFVFF 236 (276)
T ss_dssp EEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG------GCEEEEEEEECSS
T ss_pred EEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChh------HCEEEEEEEEcCc
Confidence 98743 2221 0 01111222221 27999988765 8999999999983
No 250
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.08 E-value=4.3e-10 Score=82.25 Aligned_cols=109 Identities=17% Similarity=0.035 Sum_probs=64.3
Q ss_pred eeceee-eecCceeEeecccc-Cc----ccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEE
Q psy5697 4 FHISTL-LADADTYIIADRSL-FP----RPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQL 75 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~-~p----~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i 75 (145)
|.|..+ ..|++.|.|..... .+ +....+. ..+. ....+|.+...|...+..| ++|.|.+.| |.|.+
T Consensus 65 l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~--l~V~---~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~ 138 (201)
T 1nkr_A 65 FSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLD--IVII---GLYEKPSLSAQPGPTVLAGENVTLSCSSRS-SYDMY 138 (201)
T ss_dssp EEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEE--EEEE---CSSCCCEEEEESCSEECTTCEEEEEEEESS-CCSEE
T ss_pred EEeccCCcccCeEEEEeEecCCCCccccCCCCCEE--EEee---ccCCCCceecCCCCccCCCCeEEEEEeCCC-CCceE
Confidence 334433 57888998886432 11 1111111 1111 1124678777776433333 999999988 67999
Q ss_pred EEEccCCeEeecccCceEEe---eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 76 GWRFSNNTVIAYVKDLRIAL---SNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 76 ~W~~~dg~~i~~~~~~~~~~---~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.|+| ||..+.......... .+++|.|.++. |+|.|+|.|+|..
T Consensus 139 ~w~k-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--------d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 139 HLSR-EGEAHERRLPAGPKVNGTFQADFPLGPAT--------HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEE-TTCSSCEEEECEEEETTEEEEEEEEEECC--------SCEEEEEEEEETT
T ss_pred EEEE-CCcccCcccccccccCCceEEEEEeCCcC--------CCeeEEEEEEcCC
Confidence 9985 776543211111111 24689997663 7999999999764
No 251
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.08 E-value=2.6e-09 Score=79.71 Aligned_cols=106 Identities=10% Similarity=-0.024 Sum_probs=67.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCCC--ccCeEEEeeE-eccCCCEEEEEccCCeEee
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGN--RTRGLELTRQ-TRYEPSQLGWRFSNNTVIA 86 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~--~~g~~L~C~a-~G~P~P~i~W~~~dg~~i~ 86 (145)
..|++.|.|......... .+. .. ...+|..+..+.... +..+.|.|.+ .|.|.|.++|++ ||..+.
T Consensus 57 ~~d~G~Y~C~~~~~~~s~--~~~--l~------v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~ 125 (262)
T 3rjd_A 57 VNDSGEYRCQRGLSGRSD--PIQ--LE------IHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFK 125 (262)
T ss_dssp GGGCEEEEEEESSSCCCC--CEE--EE------EECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEE
T ss_pred cccCeEEEEEEecCCccc--cEE--EE------EeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEE-CCcccc
Confidence 567778888765422211 111 01 112344443333322 2339999999 899999999984 777764
Q ss_pred cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 87 YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 87 ~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
. ...+++|.|.++..+ |+|.|+|.|.|..|.. ....+.|.
T Consensus 126 ~------~~~~~~l~i~~~~~~------d~G~Y~C~~~n~~~~~~~~~~l~V~ 166 (262)
T 3rjd_A 126 F------FHWNSNLTILKTNIS------HNGTYHCSGMGKHRYTSAGISVTVK 166 (262)
T ss_dssp E------EEECCCEEESSCCGG------GCEEEEEEEESSSEEEEECEEEEEE
T ss_pred c------cCCCCeEEEEECChh------hCEEEEEEEeCCCCccccceEEEec
Confidence 2 224678999887655 8999999999999765 33355554
No 252
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.08 E-value=8.6e-10 Score=83.64 Aligned_cols=90 Identities=17% Similarity=0.136 Sum_probs=56.7
Q ss_pred CCCCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeEee---c-----------ccCceEE----eeCCcEE
Q psy5697 44 EHYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTVIA---Y-----------VKDLRIA----LSNGSLM 101 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~i~---~-----------~~~~~~~----~~~GsL~ 101 (145)
..+|.+.+.|.. .. +..+.|.|.+.|. .|.|.|++.+ +.... . .+..... ..+++|.
T Consensus 135 ~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 213 (256)
T 3tf7_C 135 GSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLT 213 (256)
T ss_dssp ---CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEE
T ss_pred cCccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEE
Confidence 346677777765 22 3339999999997 8899998632 22111 0 0011111 1234799
Q ss_pred EcCCCCCCCCCCCCCeEEEEEEEcCCCceE---EEEEEEEec
Q psy5697 102 FPPFPETGFRPDVHSTVYRCRASNEAGVIL---SRFVHVKAD 140 (145)
Q Consensus 102 i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~---s~~v~v~~~ 140 (145)
|.++..+ |+|.|+|.|+|..|.+. ...+.|...
T Consensus 214 I~~v~~~------DsG~Y~C~a~n~~g~~~fG~gt~l~v~~~ 249 (256)
T 3tf7_C 214 LESASPS------QTSLYFCASSDAPGQLYFGEGSKLTVLEL 249 (256)
T ss_dssp ESSCCGG------GCEEEEEEEEEETTEEEECCCEEEEEECG
T ss_pred ECCCCHH------HCEEEEEEecCCCCccEECCCeEEEEEcc
Confidence 9988766 89999999999999873 345666643
No 253
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.08 E-value=1.4e-10 Score=84.18 Aligned_cols=86 Identities=8% Similarity=-0.015 Sum_probs=57.4
Q ss_pred CCCEEEEcCCCCCc--cCeEEEeeEeccCCCEEEEEccCCeEeecc-cCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 45 HYPFRIKSAPGGNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYV-KDLRIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 45 ~~P~~i~~p~~~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~-~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+|.|...|...+. ..++|.|.+.| +++.+.|+ +||..+... ........+++|.|.++..+ |+|.|+|
T Consensus 3 ~~P~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~-k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C 74 (188)
T 1oll_A 3 PKPFIWAEPHFMVPKEKQVTICCQGNY-GAVEYQLH-FEGSLFAVDRPKPPERINKVKFYIPDMNSR------MAGQYSC 74 (188)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECCT-TCCEEEEE-ETTEEEEEECCSSCTTCCEEEEEESSCCGG------GCEEEEE
T ss_pred CCCEEEeecCCcCCCCCCEEEEEecCC-CCCEEEEE-ECCCcccccccccCCCcceeEEEeCcCCcc------cCeEEEE
Confidence 36788877776333 33999999987 45899997 577765421 11111224568999988765 8999999
Q ss_pred EEEcCCCce-EEEEEEEE
Q psy5697 122 RASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 122 ~A~N~~G~~-~s~~v~v~ 138 (145)
.|.|..|.. .+..+.|.
T Consensus 75 ~~~~~~~~~~~s~~~~l~ 92 (188)
T 1oll_A 75 IYRVGELWSEPSNLLDLV 92 (188)
T ss_dssp EEEETTEECCCCCCEEEE
T ss_pred EecCCCCCCCCCCceEEE
Confidence 999987643 34444433
No 254
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.08 E-value=7.2e-10 Score=90.87 Aligned_cols=70 Identities=13% Similarity=0.150 Sum_probs=48.7
Q ss_pred CeEEEeeEec-cCCCEEEEEccCCeEeecccCc--------eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTR-YEPSQLGWRFSNNTVIAYVKDL--------RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G-~P~P~i~W~~~dg~~i~~~~~~--------~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.| .|+|.|+|++ ||..+...... +....+++|.|.++..+ |+|.|+|.|+|. ..
T Consensus 244 ~v~L~C~~~g~~p~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~A~N~--~~ 314 (423)
T 3qs7_E 244 PLWIRCKAVHVNHGFGLTWEL-ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN------DTGYYTCSSSKH--PS 314 (423)
T ss_dssp CEEEEEEEEESSSCCCEEEEE-SSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTT------TCEEEEEEETTE--EE
T ss_pred eEEEEEEEEcCCCCcEEEEEE-CCEEccccceeecccccCCceeEEEEEEEEeecCHH------HCEEEEEEEecC--CC
Confidence 3999999999 7789999985 66665432101 11233458999988765 899999999999 22
Q ss_pred EEEEEEEE
Q psy5697 131 LSRFVHVK 138 (145)
Q Consensus 131 ~s~~v~v~ 138 (145)
.+..+.|.
T Consensus 315 ~~~~L~V~ 322 (423)
T 3qs7_E 315 QSALVTIV 322 (423)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEE
Confidence 34444444
No 255
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.08 E-value=1.6e-10 Score=87.77 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=48.6
Q ss_pred EEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEcc-CCeEee---c---------ccCceEEeeC--CcEEEcCCCCCC
Q psy5697 48 FRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFS-NNTVIA---Y---------VKDLRIALSN--GSLMFPPFPETG 109 (145)
Q Consensus 48 ~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~-dg~~i~---~---------~~~~~~~~~~--GsL~i~~~~~~~ 109 (145)
.+.+.|.. ....| +.|.|.+.|.|+|.|+|++. +|..+. . ..+......+ ++|.|.++..+
T Consensus 141 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~- 219 (257)
T 1f3r_B 141 KLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPE- 219 (257)
T ss_dssp CSCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGG-
T ss_pred EEEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChh-
Confidence 44455544 23333 99999999999999999873 344321 0 0111111122 37999888765
Q ss_pred CCCCCCCeEEEEEEEcCC
Q psy5697 110 FRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 110 ~~~~~d~G~Y~C~A~N~~ 127 (145)
|+|.|.|.|.|..
T Consensus 220 -----D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 220 -----DVATYFCYQYNNG 232 (257)
T ss_dssp -----GCSEEEEEEESSS
T ss_pred -----hCEEEEEEEeCCC
Confidence 8999999999975
No 256
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.08 E-value=2.1e-10 Score=83.83 Aligned_cols=114 Identities=13% Similarity=0.133 Sum_probs=68.2
Q ss_pred ceee-eecCceeEeeccccCcc--cCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccC--CCEEEE
Q psy5697 6 ISTL-LADADTYIIADRSLFPR--PLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYE--PSQLGW 77 (145)
Q Consensus 6 ~~~~-~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P--~P~i~W 77 (145)
|..+ ..|++.|.|........ ...... +. .......+|.+...|.. .. +..+.|.|.+.|.+ .|+|+|
T Consensus 72 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~---l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 147 (211)
T 3tv3_L 72 VSGLQTDDEAVYYCGSLVGNWDVIFGGGTK---LT-VLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAW 147 (211)
T ss_dssp EESCCGGGCEEEEEEEEETTTEEEECCCEE---EE-ECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceeECCCce---EE-EeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEE
Confidence 3343 67888998887654331 110011 11 11223367887777765 22 23399999999964 589999
Q ss_pred EccCCeEeeccc--CceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 78 RFSNNTVIAYVK--DLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 78 ~~~dg~~i~~~~--~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+ +||..+.... .......+| .|.|.++..+ |.|.|+|.|+|..|..
T Consensus 148 ~-k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~Y~C~v~~~~~~~ 201 (211)
T 3tv3_L 148 K-ADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWK------SHRSYSCQVTHEGSTV 201 (211)
T ss_dssp E-ETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHH------HSSCEEEEEEETTEEE
T ss_pred E-ECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhC------CCCeEEEEEEECCCCE
Confidence 7 5888875311 011122233 4667654332 6999999999999765
No 257
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.08 E-value=1.8e-10 Score=88.06 Aligned_cols=120 Identities=17% Similarity=0.044 Sum_probs=71.0
Q ss_pred eeceee-eecCceeEeeccccC--cccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEE
Q psy5697 4 FHISTL-LADADTYIIADRSLF--PRPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWR 78 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~ 78 (145)
|.|..+ ..|++.|.|...+.. -+....+. ..+. ....+|.+...|...+..| ++|.|.+.+. .+++.|+
T Consensus 62 L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~--L~V~---~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~-~~~~~w~ 135 (242)
T 1p6f_A 62 FYIPDMNSRMAGQYSCIYRVGELWSEPSNLLD--LVVT---EMYDTPTLSVHPGPEVISGEKVTFYCRLDTA-TSMFLLL 135 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEECCCCCCEE--EEEE---CCSCCCEEEEESCSEEETTCEEEEEEECTTS-CSEEEEE
T ss_pred EEecCCCcccCeEEEEEEecCCccccCCcceE--EEee---cccCCCceEccCCCccCCCCcEEEEEecCCC-CCEEEEE
Confidence 445444 678888888764321 11111122 1111 1123677777765433333 9999999875 5799998
Q ss_pred ccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC--CceEEEEEEEE
Q psy5697 79 FSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA--GVILSRFVHVK 138 (145)
Q Consensus 79 ~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~--G~~~s~~v~v~ 138 (145)
| ||..+... ......+++|.|.++..+ |+|.|+|.|.|.. .+..|..+.|.
T Consensus 136 k-~g~~~~~~--~~~~~~~~~l~I~~v~~~------d~G~Y~C~a~n~~~~~s~~S~~~~l~ 188 (242)
T 1p6f_A 136 K-EGRSSHVQ--RGYGKVQAEFPLGPVTTA------HRGTYRCFGSYNNHAWSFPSEPVKLL 188 (242)
T ss_dssp E-CSSSCEEE--EEECSSEEEEEEEECCGG------GCEEEEEEEEEETTEECCCCCCEEEE
T ss_pred E-CCCccCcc--ccCCCceEEEEeCCCccc------cCEEEEEEEECCCCcccCCCCCEEEE
Confidence 5 77654321 112233468999988765 8999999999975 23344444444
No 258
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.07 E-value=4.1e-10 Score=90.46 Aligned_cols=110 Identities=12% Similarity=0.138 Sum_probs=67.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEec-cCCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTR-YEPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G-~P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+......+.-. . +.. .....+|.+...++. .. ...+.|.|.+.| .|+| +|+|++ ||..
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~-~-l~V--~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~ 158 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGT-K-LDL--KRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSE 158 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCE-E-EEE--CCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-TTEE
T ss_pred CcCCeeEEEEEecCCCccccCce-e-EEe--cCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEE-CCEE
Confidence 57888898888664332211101 0 111 222357776665543 11 223899999988 7888 999985 8887
Q ss_pred eecccCc-eEE--ee------CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYVKDL-RIA--LS------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~~~~-~~~--~~------~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+...... ... .. .++|.|.++..+ |+|.|+|.|.|..|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 159 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTSTS 207 (438)
T ss_dssp ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEEETTCSS
T ss_pred cCCCceeccccccCCCCcEEEEEEEEEeCcccC------CCCeEEEEEEecccCC
Confidence 7533000 011 11 236888877654 8999999999999984
No 259
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.07 E-value=1e-09 Score=90.60 Aligned_cols=112 Identities=13% Similarity=0.230 Sum_probs=67.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEE-EeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCCC--EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIV-YSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEPS--QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P--~i~W~~~dg~ 83 (145)
..|++.|.|...+...... .++..+ .........+|.+...|.. .. +..+.|.|.+.|.|+| +|+|+ +||.
T Consensus 79 ~~D~G~Y~C~a~n~~g~~~--~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~-k~g~ 155 (523)
T 2rcj_C 79 AEDESDYYCASWNSSDNSY--VFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWK-ADGS 155 (523)
T ss_pred hhhCEEEEEEEccCCCccc--cccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEe-cCCC
Confidence 6788888888765432110 011100 0001111356777666655 22 2238999999999875 99997 4887
Q ss_pred EeecccCce--EEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VIAYVKDLR--IALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i~~~~~~~--~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+....... ....+| +|.|.++..+ |+|.|+|.|+|..|..
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~~ 204 (523)
T 2rcj_C 156 PVKAGVETTKPSKQSNNKYAASSYLSLTPEQWK------SHRSYSCQVTHEGSTV 204 (523)
T ss_pred CCCCceEeccccccCCCCEEEEEEEEEechhcC------CCceEEEEEEecCccc
Confidence 764321110 111233 5888777554 8999999999999875
No 260
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.07 E-value=4.8e-10 Score=88.57 Aligned_cols=72 Identities=10% Similarity=-0.053 Sum_probs=51.0
Q ss_pred CeEEEeeEec-----cCCCEEEEEccCCeEeecc-------cCceEEe-----------eC--CcEEEcCCCCCCCCCCC
Q psy5697 60 RGLELTRQTR-----YEPSQLGWRFSNNTVIAYV-------KDLRIAL-----------SN--GSLMFPPFPETGFRPDV 114 (145)
Q Consensus 60 g~~L~C~a~G-----~P~P~i~W~~~dg~~i~~~-------~~~~~~~-----------~~--GsL~i~~~~~~~~~~~~ 114 (145)
.+.|.|.+.| +|.|.|+|+ +||..+... .....+. .+ ++|.|.++..+
T Consensus 193 ~v~l~C~~~~~~~~~~P~p~i~W~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------ 265 (363)
T 1wio_A 193 QVEFSFPLAFTVEKLTGSGELWWQ-AERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQ------ 265 (363)
T ss_dssp CEEEECCCCCCCCSSCEEEEEEEE-ESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGG------
T ss_pred EEEEEEEEecccccCCCceeEEEe-cCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcC------
Confidence 3899998888 899999997 477665431 2122221 33 38999888655
Q ss_pred CCeEEEEEEEcC--CCce-EEEEEEEE
Q psy5697 115 HSTVYRCRASNE--AGVI-LSRFVHVK 138 (145)
Q Consensus 115 d~G~Y~C~A~N~--~G~~-~s~~v~v~ 138 (145)
|+|.|+|.|+|. .|.. .+..+.|.
T Consensus 266 d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 266 YAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp GCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred cCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 899999999999 9976 33344443
No 261
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.06 E-value=3.8e-10 Score=83.15 Aligned_cols=114 Identities=10% Similarity=0.042 Sum_probs=63.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-C-CccCe-EEEeeEe-ccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-G-NRTRG-LELTRQT-RYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~-~~~g~-~L~C~a~-G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|......... . ..........+|.+...+.. . .+..+ .|.|.+. |+|.|+|+|++ |+...
T Consensus 87 ~~D~G~Y~C~~~~~~~~~---~----~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k-~~~~~ 158 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGS---R----SVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHS-DLGGM 158 (221)
T ss_dssp CCCCSCBEEEEEESSSCS---C----EEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEEC-SSSCC
T ss_pred hHHCeEEEEEEEeCCCCc---e----EEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEe-CCCCC
Confidence 567777777654321111 1 11122334457766655443 2 22236 5999987 99999999975 43221
Q ss_pred ecccC-----ceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy5697 86 AYVKD-----LRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 86 ~~~~~-----~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v 137 (145)
..... ........+|.|.+...+ |.|.|+|.|+|+.+.. .+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 159 PQTSQVPGFLSGTVTVTSLWILVPSSQV------DGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp CCCEEECCCCBTTBCCEEEEECCCCSCC------CCCCEEEEECCSCSSSCEEEEECC
T ss_pred CccceeecCCCCcEEEEEEEEEeCCHHH------CCCeEEEEEECCCCCCCeEEEEEE
Confidence 11000 000011235777765443 8999999999999875 4444433
No 262
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.06 E-value=1.4e-09 Score=74.41 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=51.8
Q ss_pred CeEEEeeEeccCCCEEEEEccCCe----Ee-----------e--cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNT----VI-----------A--YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~----~i-----------~--~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.+.|.|.....+.+.|+|+|.+.. .| . ...++..+..||+|.|.+++.+ |+|.|+|.
T Consensus 17 ~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~------D~G~Ytc~ 90 (111)
T 2qsq_A 17 EVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQN------DAGFYTLH 90 (111)
T ss_dssp CEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGG------GCEEEEEE
T ss_pred CEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCccc------CCeEEEEE
Confidence 399999853344568999874311 11 1 1123456788999999999876 89999999
Q ss_pred EEcCCCceEEEEEEEEec
Q psy5697 123 ASNEAGVILSRFVHVKAD 140 (145)
Q Consensus 123 A~N~~G~~~s~~v~v~~~ 140 (145)
+.|..|......+.++..
T Consensus 91 v~~~~~~~~~~~~~L~V~ 108 (111)
T 2qsq_A 91 VIKSDLVNEEATGQFRVY 108 (111)
T ss_dssp EEETTSCCEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEEEe
Confidence 999988655555555543
No 263
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.06 E-value=9.9e-10 Score=74.16 Aligned_cols=82 Identities=12% Similarity=0.134 Sum_probs=54.0
Q ss_pred CCCCEEEEcCCCCCccC--eEEEeeEeccCCC-----EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCC
Q psy5697 44 EHYPFRIKSAPGGNRTR--GLELTRQTRYEPS-----QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 44 ~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P-----~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~ 116 (145)
..+|.+...|...+..| ++|.|.+.+.|.+ ++.|+ +||..+.. ...+++|.|.++..+ |+
T Consensus 6 ~~kP~l~~~p~~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~-k~g~~l~~------~~~~~~l~i~~v~~~------ds 72 (108)
T 4hwn_A 6 FPAPILRAVPSAEPQAGSPMTLSCQTKLPLQRSAARLLFSFY-KDGRIVQS------RGLSSEFQIPTASED------HS 72 (108)
T ss_dssp CCCCEEEEESCSSCBTTCCEEEEEEC---------CCEEEEE-ETTEEEEE------EESCCEEEESSCCGG------GC
T ss_pred CCCCEEEecCCCcCCCCCcEEEEEcccCCCCCcCcceEEEEE-ECCcCccC------CCcccEEEeCccCcc------cC
Confidence 34577777776533333 9999999887765 49998 48877642 224568999888765 89
Q ss_pred eEEEEEEEcCCCce--EEEEEEEE
Q psy5697 117 TVYRCRASNEAGVI--LSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~--~s~~v~v~ 138 (145)
|.|+|.|.|..|.. .|..+.|.
T Consensus 73 G~Y~C~~~~~~~~~~~~S~~l~L~ 96 (108)
T 4hwn_A 73 GSYWCEAATEDNQVWKQSPQLEIR 96 (108)
T ss_dssp EEEEEEEECTTSSSEEECCCEEEC
T ss_pred eEEEEEEEeCCCceeccCCCEEEE
Confidence 99999999998743 44445544
No 264
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.06 E-value=8.7e-10 Score=81.30 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=62.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEE-eccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEecc-CCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVY-SSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRY-EPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~-P~P-~i~W~~~dg~ 83 (145)
..|+++|.|......... ..+|..+. ........+|.+...++. .. +..+.|.|.+.|. |.| +|+|++ ++.
T Consensus 90 ~~D~G~Y~C~~~~~~~~~--~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~ 166 (220)
T 1pz5_B 90 AEDTGIYYCTRGGAVGAM--DYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNY-GAL 166 (220)
T ss_dssp GGGCEEEEEEEECTTSSE--EEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGG-GTC
T ss_pred HHHCEEEEEEEecCCccc--ceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEec-CCc
Confidence 578889988875532110 01111110 111122356766554433 22 2338999999998 999 999975 554
Q ss_pred Ee--ecccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VI--AYVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i--~~~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+ ...+.. ......++|.|.+... |.|.|+|.|+|.+|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-------~~g~Y~C~a~n~~~~~ 211 (220)
T 1pz5_B 167 SSGVRTVSSVLQSGFYSLSSLVTVPSSTW-------PSQTVICNVAHPASKV 211 (220)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECGGGT-------TTSCCEEEEEEGGGTE
T ss_pred ccceEEcCCcccCCeEEEEEEEEEcchhc-------CCceEEEEEEECCccE
Confidence 21 011111 0112245688865532 2499999999999975
No 265
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.06 E-value=1.5e-09 Score=79.03 Aligned_cols=55 Identities=9% Similarity=0.093 Sum_probs=41.4
Q ss_pred eEEEeeE-eccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE
Q psy5697 61 GLELTRQ-TRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 132 (145)
Q Consensus 61 ~~L~C~a-~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s 132 (145)
+.|.|.+ .| |.|+|+|+ +||..+.. ..+.+|.+.. . .|+|.|+|.|+|.+|...+
T Consensus 118 v~L~C~~~~g-p~p~i~W~-~~~~~l~~-------~~~~~l~~~~--~------~d~g~Y~C~a~N~~~~~~~ 173 (180)
T 2dru_A 118 ATLTCEVLEG-TDVELKLY-QGKEHLRS-------LRQKTMSYQW--T------NLRAPFKCKAVNRVSQESE 173 (180)
T ss_dssp TEEEEECSSC-TTCEEEEE-ETTEEEEE-------ESSSEEEEEC--S------CCSSCEEEEEEETTEEEEE
T ss_pred EEEEEEeCCC-CCCEEEEE-ECCeECcC-------CCCCEEEEEE--h------hcCccEEEEEecCcCcccc
Confidence 8999999 77 99999997 47777641 2344666522 1 2899999999999998743
No 266
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.05 E-value=3.3e-10 Score=85.19 Aligned_cols=105 Identities=10% Similarity=0.008 Sum_probs=53.2
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCc--cCeEEEeeEeccC-----CCEEEEEccC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNR--TRGLELTRQTRYE-----PSQLGWRFSN 81 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P-----~P~i~W~~~d 81 (145)
..|++.|.|... |... .........+|.+.+.|.. ... ..+.|.|.+.|.| .|.|+|++.+
T Consensus 13 ~~dsg~Y~C~a~-------g~~~----~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 81 (254)
T 2c1o_A 13 PGTSVKLSCKAS-------GYSF----TNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQR 81 (254)
T ss_dssp ------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEEC
T ss_pred CCccEEEEEcCc-------hhhh----hhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeC
Confidence 467778888774 1111 1111111225667776765 223 3399999999999 4999998633
Q ss_pred -CeEee-----------cccCceEEe-eCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 82 -NTVIA-----------YVKDLRIAL-SNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 82 -g~~i~-----------~~~~~~~~~-~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
|..+. ..+...... ..+ +|.|.++..+ |+|.|+|.|.|..+...
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~ 140 (254)
T 2c1o_A 82 PGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAE------DLGIYYCVQGSHFPPTF 140 (254)
T ss_dssp TTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCSEEEEEECSSSSCEE
T ss_pred CCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcc------cCEEEEEEEEcCcceEe
Confidence 43221 011122222 222 7999988765 89999999999977543
No 267
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.05 E-value=9.6e-10 Score=83.03 Aligned_cols=133 Identities=13% Similarity=0.070 Sum_probs=71.9
Q ss_pred eceee-eecCceeEeeccccCcccCCceeeeE----EEec-------cCCCCCCCEEEEcCCC-CC--ccCeEEEeeEec
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGNI----VYSS-------RSENEHYPFRIKSAPG-GN--RTRGLELTRQTR 69 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~----~~~~-------~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G 69 (145)
+|..+ ..|+++|+|...+..+... ..++.. |... ......+|.+...|.. .. +..+.|.|.+.|
T Consensus 89 ~I~~v~~~DsG~Y~C~~~n~~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 167 (257)
T 3gkz_A 89 QLKSVSSEDTATYYCSYFDSDDYAM-EYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASS 167 (257)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTC-EEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESS
T ss_pred EECCCChhhCEEEEEEEecCCCcce-eEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEcc
Confidence 34444 6789999998866421111 011110 1111 0011234566666654 22 333999999999
Q ss_pred cCCC-EEEEEcc-CCeEee---c--------c-cCceEEeeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE-
Q psy5697 70 YEPS-QLGWRFS-NNTVIA---Y--------V-KDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS- 132 (145)
Q Consensus 70 ~P~P-~i~W~~~-dg~~i~---~--------~-~~~~~~~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s- 132 (145)
.|.| .|.|++. +|..+. . . .+....... .+|.|.++..+ |+|.|.|.|.|.......
T Consensus 168 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~~~~~~fg~ 241 (257)
T 3gkz_A 168 SVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAE------DAASYFCHQWSSFPFTFGS 241 (257)
T ss_dssp CCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEECSSSSCEECC
T ss_pred CccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChH------HCEEEEEEEccCCceEEcC
Confidence 9988 9999863 232211 0 0 111111112 25999988765 899999999997655533
Q ss_pred -EEEEEEeccCCC
Q psy5697 133 -RFVHVKADSRIP 144 (145)
Q Consensus 133 -~~v~v~~~~~~p 144 (145)
..+.|...++-|
T Consensus 242 gt~l~v~~~~~~~ 254 (257)
T 3gkz_A 242 GTKLEIKRAPHHH 254 (257)
T ss_dssp CEEEEECCC----
T ss_pred CEEEEEEeCCCCC
Confidence 356665544433
No 268
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.05 E-value=5.3e-10 Score=81.65 Aligned_cols=73 Identities=14% Similarity=0.090 Sum_probs=49.2
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEee-----------cccCceEEe-eCC--cEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVIA-----------YVKDLRIAL-SNG--SLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i~-----------~~~~~~~~~-~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.+.|.|.+.|.|.|.|+|++.+ |..+. ..+...... ..+ +|.|.++..+ |+|.|+|.|.
T Consensus 18 ~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~ 91 (213)
T 3d9a_L 18 SVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE------DFGMYFCQQS 91 (213)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEC
T ss_pred cEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChh------hCEEEEEeee
Confidence 3999999999999999998643 32210 111122222 222 8999988765 8999999999
Q ss_pred cCCCceEEE--EEEEE
Q psy5697 125 NEAGVILSR--FVHVK 138 (145)
Q Consensus 125 N~~G~~~s~--~v~v~ 138 (145)
|..|...+. .+.|.
T Consensus 92 ~~~~~~~~~~~~l~V~ 107 (213)
T 3d9a_L 92 NSWPYTFGGGTKLEIK 107 (213)
T ss_dssp SSSSCEECCCEEEEEC
T ss_pred cCCcceeCCCEEEEEe
Confidence 998865432 44443
No 269
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.05 E-value=1.7e-10 Score=84.02 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=44.4
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcC-CCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~-~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+.|.|.+.| |++ |+|+ +||..+... .+++|.|.+ +..+ |+|.|+|.|.|..|..
T Consensus 17 v~L~C~~~~-~~~-i~W~-k~g~~l~~~-------~~~~L~I~~~~~~~------D~G~Y~C~a~n~~g~~ 71 (186)
T 1jbj_A 17 VELTCPLDS-DEN-LKWE-KNGQELPQK-------HDKHLVLQDFSEVE------DSGYYVCYTPASNKNT 71 (186)
T ss_dssp EEEECSSCC-CTT-CEEE-ETTEEECSC-------CCSEEEEESCCTTT------SCEEEEEECSSCCCCC
T ss_pred EEEEEeCCC-CCc-eEEE-ECCEECCCC-------CCCEEEECCCCccc------cCEEEEEEEEeCCCcE
Confidence 899999999 555 9997 588887532 356899998 7655 8999999999999984
No 270
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.04 E-value=2.1e-09 Score=77.69 Aligned_cols=92 Identities=10% Similarity=0.100 Sum_probs=57.9
Q ss_pred eecCceeEeeccccCcccCCceeeeE-EEeccCCCCCCCEEEEcCCCCCccCeEEEeeEeccCCCEEEEEccCCeEeecc
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNI-VYSSRSENEHYPFRIKSAPGGNRTRGLELTRQTRYEPSQLGWRFSNNTVIAYV 88 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~P~~i~~p~~~~~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~ 88 (145)
..|+++|.|...+.... ..... |.. ....|.+...... ..|.|.+.|.|.|+|+|+ +||+.+...
T Consensus 69 ~~DsG~Y~C~~~n~~~~----~~~~L~V~~----~~~~p~i~~~~~~-----~~L~C~~~~~p~p~i~W~-~~~~~l~~~ 134 (171)
T 1ccz_A 69 SSDEDEYEMESPNITDT----MKFFLYVLE----MVSKPMIYWECSN-----ATLTCEVLEGTDVELKLY-QGKEHLRSL 134 (171)
T ss_dssp GGGCEEEEEECTTCCSC----EEEEEEEEC----CCCCCEEEEETTT-----TEEEEECSSCSSCEEEEE-ETTEEEEEE
T ss_pred hhhCceEEEEEeCCCCc----EEEEEEEEC----cCCCCEEEEecCC-----cEEEEEeCCCCCcEEEEE-ECCEECcCC
Confidence 57888888877543221 11111 211 1234665544322 479999999999999997 588877532
Q ss_pred cCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 89 KDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 89 ~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.. .+|.+.. ..|+|.|+|.|+|.+|..
T Consensus 135 ~~-------~~l~~~~--------~~~~g~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 135 RQ-------KTMSYQW--------TNLRAPFKCKAVNRVSQE 161 (171)
T ss_dssp SS-------SEEEEEC--------SCCSSCEEEEEEETTEEE
T ss_pred cc-------eEEEEec--------cCCCceEEEEEEcccCcc
Confidence 21 2333321 127999999999999986
No 271
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.04 E-value=5.6e-10 Score=90.29 Aligned_cols=76 Identities=7% Similarity=-0.077 Sum_probs=53.3
Q ss_pred CC-EEEEcCCC-CCccC--eEEEeeEeccCCC---EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeE
Q psy5697 46 YP-FRIKSAPG-GNRTR--GLELTRQTRYEPS---QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 46 ~P-~~i~~p~~-~~~~g--~~L~C~a~G~P~P---~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~ 118 (145)
+| .+...|.+ ....| +.|.|.+.|.|+| +|+|+ +||..+...... ....+++|.|.++..+ |+|.
T Consensus 85 ~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~-k~g~~l~~~~~~-~~~~~~~L~i~~~~~~------d~G~ 156 (450)
T 1z7z_I 85 TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLL-RGEKELKREPAV-GEPAEVTTTVLVRRDH------HGAN 156 (450)
T ss_dssp CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEE-ETTEEEEEEECC-TTTEEEEEEEECCSSC------SSCE
T ss_pred CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEe-eCCEEeeccccc-ccccceEEEEEeeccc------cCce
Confidence 44 34355554 22233 8999999999998 99998 488877533211 1123458999877554 8999
Q ss_pred EEEEEEcCCCc
Q psy5697 119 YRCRASNEAGV 129 (145)
Q Consensus 119 Y~C~A~N~~G~ 129 (145)
|+|.|.|.+|.
T Consensus 157 Y~C~a~n~~g~ 167 (450)
T 1z7z_I 157 FSCRTELDLRP 167 (450)
T ss_dssp EEEEEEEECGG
T ss_pred EEEEEEcccCC
Confidence 99999999885
No 272
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.04 E-value=1.7e-10 Score=84.44 Aligned_cols=114 Identities=13% Similarity=0.190 Sum_probs=60.2
Q ss_pred eecCceeEeeccccCcccCCceeeeEE-EeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEec-cCCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIV-YSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTR-YEPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G-~P~P-~i~W~~~dg~ 83 (145)
..|++.|.|.............++..+ .........+|.+...++. .. ...+.|.|.+.| .|+| +|+|++ ||.
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k-~g~ 162 (218)
T 3s96_B 84 PEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKA-NGT 162 (218)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTE
T ss_pred cccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEE-CCE
Confidence 678888888875432200000011000 0011122356777665544 21 223899999999 6777 999985 888
Q ss_pred EeecccCc-eEEeeCCc------EEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VIAYVKDL-RIALSNGS------LMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i~~~~~~-~~~~~~Gs------L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+...... .....+|+ |.|.+...+ |.|.|+|.|+|..|..
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~------d~g~Y~C~a~n~~~~~ 210 (218)
T 3s96_B 163 PITQGVDTSNPTKEGNKFMASSFLHLTSDQWR------SHNSFTCQVTHEGDTV 210 (218)
T ss_dssp EC--------------CEEEEEEEEEEHHHHH------TCSCEEEEEEETTEEE
T ss_pred ECcCceecCcccccCCcEEEEEEEEEeHHHcc------CCCeEEEEEEeCCCcc
Confidence 87532111 11112443 555443222 6999999999998865
No 273
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.03 E-value=4.5e-10 Score=84.74 Aligned_cols=110 Identities=12% Similarity=0.149 Sum_probs=64.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEecc-CCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRY-EPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~-P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|......+.. ++..+.-.......+|.+...++. .. +..+.|.|.+.|. |+| +|+|++ ||..
T Consensus 118 ~~D~G~Y~C~~~~~~~~~----~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~ 192 (252)
T 3bkj_L 118 AEDLGVYYCFQASLVPLT----FGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSE 192 (252)
T ss_dssp GGGCEEEEEEECSBSSCE----ECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred cccCEEEEEEEEcCCccE----ECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEE-CCee
Confidence 678889988876543321 111110001122346776665544 11 2238999999995 544 899985 8887
Q ss_pred eecc-cCc--eEEeeCCc------EEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAYV-KDL--RIALSNGS------LMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~~-~~~--~~~~~~Gs------L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+... ... .....+|+ |.|.++..+ |+|.|+|.|+|.....
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 193 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTSTS 241 (252)
T ss_dssp ECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHH------HCCEEEEEEECTTCSS
T ss_pred cCCCeeeecCcccCCCCCEEEEEEEEEcchhcc------CCCeEEEEEEeCCCCC
Confidence 6532 000 01123443 788766433 7999999999987653
No 274
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.03 E-value=3.5e-09 Score=78.71 Aligned_cols=115 Identities=10% Similarity=0.108 Sum_probs=64.8
Q ss_pred eceee-eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCc--cCeEEEeeEeccCC--CEEEEE
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNR--TRGLELTRQTRYEP--SQLGWR 78 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~--~g~~L~C~a~G~P~--P~i~W~ 78 (145)
+|..+ ..|++.|.|...+......+... ...+........++.++..|.. ... ..+.|.|.+.|.|. |.|+|+
T Consensus 78 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~-~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~ 156 (240)
T 1moe_A 78 IIDPVEADDVATYYCQQTNEDPYTFGGGT-KLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWV 156 (240)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCCBCCCE-EEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEE
T ss_pred EEcCCChhhCEEEEEEEccCCceeecCCE-EEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEE
Confidence 34333 67888999988665432211111 1111111111134456666665 223 33999999999984 699998
Q ss_pred ccC-CeEee----------------cccCceEEeeC-----CcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 79 FSN-NTVIA----------------YVKDLRIALSN-----GSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 79 ~~d-g~~i~----------------~~~~~~~~~~~-----GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
+.+ |..+. ..+.......+ .+|.|.++..+ |+|.|.|.|.+.
T Consensus 157 k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~~~ 220 (240)
T 1moe_A 157 KQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSE------DTAVYYCAPFGY 220 (240)
T ss_dssp EECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEEECST
T ss_pred EECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHH------HCEEEEEEEEec
Confidence 742 22210 01111122211 37999988765 899999999953
No 275
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=79.05 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=50.0
Q ss_pred CeEEEeeEecc-CCCEEEEEccCCeEeecccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceE
Q psy5697 60 RGLELTRQTRY-EPSQLGWRFSNNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 60 g~~L~C~a~G~-P~P~i~W~~~dg~~i~~~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
++.|.|.+.|. |.|.|+|++ ||..+....+......++ +|.|.++..+ |+|.|+|.|.|..|...
T Consensus 19 ~~~l~C~~~~~~p~~~i~W~~-~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~~~n~~~~~~ 86 (212)
T 2r15_A 19 GIQLYSFVTYYVEDLKVNWSH-NGSAIRYSDRVKTGVTGEQIWLQINEPTPN------DKGKYVMELFDGKTGHQ 86 (212)
T ss_dssp EEEEEEEBSSCCSSCEEEEEE-TTEECCCCSSEEEEEETTEEEEEEESCCGG------GCEEEEEEEECSSCEEE
T ss_pred eEEEEEEEeccCCCceEEEEE-CCEEccCCCeEEEEEeCCEEEEEECCCCcc------cCEEEEEEEecCCcceE
Confidence 47999999996 589999984 888876544433334444 4999888765 89999999999998763
No 276
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.03 E-value=4.6e-09 Score=77.55 Aligned_cols=119 Identities=11% Similarity=0.043 Sum_probs=67.2
Q ss_pred eeceee-eecCceeEeeccccCcccCCceeeeEEEe-ccCCCCCCCEEE-EcCCCC-CccCeEEEeeEec-cCC--CEEE
Q psy5697 4 FHISTL-LADADTYIIADRSLFPRPLGYLVGNIVYS-SRSENEHYPFRI-KSAPGG-NRTRGLELTRQTR-YEP--SQLG 76 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~P~~i-~~p~~~-~~~g~~L~C~a~G-~P~--P~i~ 76 (145)
++|..+ ..|+++|.|....... +..++..+.- .......+|.+. ..|... .+..+.|.|.+.| .|. ++|+
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~---~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~~~~~P~~~~~v~ 159 (221)
T 3m8o_H 83 LQMNSLKSDDTAMYYCVIRGDVY---NRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVT 159 (221)
T ss_dssp EEECSCCGGGCEEEEEEEESCTT---CCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEEEEEBSSCSEEEE
T ss_pred EEECCCCHHHCEEEEEEEECCCh---hheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEEEeeECCCCEEEE
Confidence 344444 6788999998755310 0112211111 111234566655 344433 1223899999998 786 4999
Q ss_pred EEccCCeEeecccCceEE-eeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEE
Q psy5697 77 WRFSNNTVIAYVKDLRIA-LSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 132 (145)
Q Consensus 77 W~~~dg~~i~~~~~~~~~-~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s 132 (145)
|+ +||..+......... ..+| +|.|.+.... |.|.|+|.|+|..|....
T Consensus 160 W~-~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~ytC~v~~~~~~~~~ 215 (221)
T 3m8o_H 160 WS-ESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCL------AGKSVTCHVKHYTNPSQD 215 (221)
T ss_dssp ES-CCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSC------TTCEEEEEEEETTSCCEE
T ss_pred EE-ECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcC------CCCeEEEEEEECCCCcee
Confidence 96 577665321111111 1223 4777665433 789999999999987643
No 277
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.02 E-value=5.1e-10 Score=94.40 Aligned_cols=60 Identities=12% Similarity=0.144 Sum_probs=45.0
Q ss_pred CeEEEeeEe-ccCCCEEEEEccCCeEeecccCc--------eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 60 RGLELTRQT-RYEPSQLGWRFSNNTVIAYVKDL--------RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 60 g~~L~C~a~-G~P~P~i~W~~~dg~~i~~~~~~--------~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
.+.|.|.+. |.|.|+|+|++ ||..+...... +....+++|.|.++..+ |+|.|+|.|+|.
T Consensus 244 ~v~L~C~~~~g~p~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~N~ 312 (527)
T 3qs9_E 244 PLWIRCKAVHVNHGFGLTWEL-ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN------DTGYYTCSSSKH 312 (527)
T ss_dssp CEEEEEEEEESSSCCCEEEEC-SSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGG------GCEEEEEEETTE
T ss_pred eEEEEEEEccCCCCeEEEEEE-CCEECCCCceeeeeeeccCcceeeEEEEEEccCCcc------cCeEEEEEEEeC
Confidence 499999996 99999999985 66665432111 11233457999988765 899999999999
No 278
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.02 E-value=6e-10 Score=80.56 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=48.4
Q ss_pred CeEEEeeEeccCCCE---EEEEccCCeEeecc-c-------------Cce----------EEeeCCcEEEcCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEPSQ---LGWRFSNNTVIAYV-K-------------DLR----------IALSNGSLMFPPFPETGFRP 112 (145)
Q Consensus 60 g~~L~C~a~G~P~P~---i~W~~~dg~~i~~~-~-------------~~~----------~~~~~GsL~i~~~~~~~~~~ 112 (145)
.+.|.|.+.|.|.|. |+|+|.++..+... . ... ....+++|.|.++..+
T Consensus 18 ~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~---- 93 (225)
T 4fmk_A 18 TVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRVE---- 93 (225)
T ss_dssp CEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCGG----
T ss_pred CEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCHH----
Confidence 399999999988874 89987655433210 0 000 0123568999988765
Q ss_pred CCCCeEEEEEEEcCCCceEEEEE
Q psy5697 113 DVHSTVYRCRASNEAGVILSRFV 135 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~~s~~v 135 (145)
|+|.|+|.|.|..|.......
T Consensus 94 --D~G~Y~C~~~~~~~~~~~~~~ 114 (225)
T 4fmk_A 94 --DEGNYTCEFATFPNGTRRGVT 114 (225)
T ss_dssp --GCEEEEEEEEEETTEEEEEEE
T ss_pred --HCcceEEEEEeCCCcceeeee
Confidence 899999999999887654433
No 279
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.02 E-value=2.9e-09 Score=80.06 Aligned_cols=111 Identities=9% Similarity=0.013 Sum_probs=59.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccC------CCCCCCEEEEcCCC-CCccC--eEEEeeEeccC--CCEEEEE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRS------ENEHYPFRIKSAPG-GNRTR--GLELTRQTRYE--PSQLGWR 78 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P--~P~i~W~ 78 (145)
..|+++|.|...+......+...--.|..+.. ....++.++..|+. ....| +.|.|.+.|.| .|.|.|+
T Consensus 80 ~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 159 (242)
T 2znx_A 80 TEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXI 159 (242)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEE
T ss_pred hHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeE
Confidence 57888999988654321111101000111111 00123344555443 33333 99999999987 5899998
Q ss_pred ccC-CeEee---c------------ccCceEEee-----CCcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 79 FSN-NTVIA---Y------------VKDLRIALS-----NGSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 79 ~~d-g~~i~---~------------~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
+.+ |..+. . ......... .++|.|.++..+ |+|.|.|.|.|.
T Consensus 160 k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~~~ 222 (242)
T 2znx_A 160 RKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE------DTATYYCANXDG 222 (242)
T ss_dssp EECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGG------GCEEEEEEETTS
T ss_pred eeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcC------cCEEEEEeccCC
Confidence 743 33221 0 111112211 138999988765 899999999995
No 280
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.02 E-value=8.2e-11 Score=77.03 Aligned_cols=49 Identities=18% Similarity=0.214 Sum_probs=39.6
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCC-CCCCCCCCCCCeEEEEEEEc
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPF-PETGFRPDVHSTVYRCRASN 125 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~-~~~~~~~~~d~G~Y~C~A~N 125 (145)
++|.|.+.|.|+ |+|+| ||..+... .+++|.|.++ ..+ |+|.|+|.|.+
T Consensus 17 v~L~C~~~g~P~--i~W~k-dg~~l~~~-------~~~~L~I~~v~~~~------DsG~Y~C~A~t 66 (82)
T 3r08_E 17 VELTCPLDSDEN--LKWEK-NGQELPQK-------HDKHLVLQDFSEVE------DSGYYVCYTPA 66 (82)
T ss_dssp EEEECSSCCCSS--CEEEE-TTEECTTC-------CSSCCBCCSCCTTT------TCSCEEEECSS
T ss_pred EEEEEECCCCCc--EEEEE-CCEECcCC-------CCCEEEECccCccC------cCEEEEEEEcc
Confidence 899999999984 99974 88887432 4678999885 434 89999999976
No 281
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.01 E-value=1.2e-09 Score=91.06 Aligned_cols=115 Identities=9% Similarity=-0.059 Sum_probs=68.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccC-CCEEEEEccCCeE-
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYE-PSQLGWRFSNNTV- 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P-~P~i~W~~~dg~~- 84 (145)
..|++.|.|...+...... .........+|.|...|.. .. +..+.|.|.+.|.| ++.|+|++.++..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~--------~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~ 155 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLS--------FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYP 155 (585)
T ss_pred cccCEEEEEEcccCCCCce--------EEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCc
Confidence 5677777776643322111 1111223445666666655 22 23399999999755 6789998754321
Q ss_pred --eec--------ccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 85 --IAY--------VKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 85 --i~~--------~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+.+ ..+...+..+| +|.|.++..+ |+|.|+|.|.|..|.. .+..+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (585)
T 2ocw_A 156 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLS------DAGQYLCQAGDDSNSNKKNADLQVL 220 (585)
T ss_pred eEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChh------HCeEEEEEeccCCccccceEEEEEc
Confidence 111 11222333334 6999888765 8999999999999986 34455554
No 282
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.01 E-value=1.7e-09 Score=72.28 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=43.5
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---eec--------ccCceEEe-eC--CcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IAY--------VKDLRIAL-SN--GSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~--------~~~~~~~~-~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.+.|.|.+.|.|.|.|.|++.+ |.. +.. .+...... .. .+|.|.++..+ |+|.|.|.|.
T Consensus 18 ~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~ 91 (108)
T 1jhl_L 18 TITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPE------DFAMYICQQH 91 (108)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTT------CCSEEEEEEC
T ss_pred CEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHH------HCEEEEEEEc
Confidence 3999999999999999998753 221 110 11111222 12 37999988766 8999999999
Q ss_pred cCCC
Q psy5697 125 NEAG 128 (145)
Q Consensus 125 N~~G 128 (145)
|...
T Consensus 92 n~~~ 95 (108)
T 1jhl_L 92 NEYP 95 (108)
T ss_dssp SSSS
T ss_pred cCCc
Confidence 9843
No 283
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.01 E-value=5.6e-10 Score=81.64 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=46.1
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEe---e--------cccCceEEe-eC--CcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVI---A--------YVKDLRIAL-SN--GSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i---~--------~~~~~~~~~-~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.+.|.|.+.|.|.|.|+|++.+ |..+ . ..+...... .+ .+|.|.++..+ |+|.|+|.|.
T Consensus 17 ~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~ 90 (210)
T 1lk3_L 17 KLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEAD------DTAIYFCQQS 90 (210)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEC
T ss_pred CEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHH------HCeEEEEEEE
Confidence 3999999999999999998643 3221 0 111122222 22 28999988765 8999999999
Q ss_pred cCCCceE
Q psy5697 125 NEAGVIL 131 (145)
Q Consensus 125 N~~G~~~ 131 (145)
|..|...
T Consensus 91 ~~~~~~~ 97 (210)
T 1lk3_L 91 WNGPLTF 97 (210)
T ss_dssp SSSSCEE
T ss_pred cCCCcee
Confidence 9988653
No 284
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.01 E-value=9e-10 Score=80.40 Aligned_cols=79 Identities=11% Similarity=0.104 Sum_probs=50.7
Q ss_pred CEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeE---eec--------ccCceEEe---eCCcEEEcCCCCC
Q psy5697 47 PFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTV---IAY--------VKDLRIAL---SNGSLMFPPFPET 108 (145)
Q Consensus 47 P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~--------~~~~~~~~---~~GsL~i~~~~~~ 108 (145)
|.+.+.|.. .. +..+.|.|.+.|.|.|.|+|++.+ +.. +.. ........ .+++|.|.++..+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 344555554 22 333999999999999999998632 211 100 01111211 2238999988765
Q ss_pred CCCCCCCCeEEEEEEEcCCCceE
Q psy5697 109 GFRPDVHSTVYRCRASNEAGVIL 131 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~G~~~ 131 (145)
|+|.|+|.|.|..|...
T Consensus 82 ------D~G~Y~C~~~~~~~~~~ 98 (213)
T 3r06_A 82 ------DIGSYYCQQYYNYPWTF 98 (213)
T ss_dssp ------GCSEEEEEECSSSSCEE
T ss_pred ------cCEEEEEecccCCceEE
Confidence 89999999999877553
No 285
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.01 E-value=6.8e-10 Score=81.74 Aligned_cols=117 Identities=16% Similarity=0.120 Sum_probs=62.7
Q ss_pred eceee-eecCceeEeeccccCcccCCceeeeEEE-eccCCCCCCCEEEEcCCC-CCccC--eEEEeeEeccCCC--EEEE
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGNIVY-SSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRYEPS--QLGW 77 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P--~i~W 77 (145)
+|..+ ..|+++|.|.......... ..++..+. ........+|.+...++. ....| +.|.|.+.|.|++ +++|
T Consensus 78 ~I~~v~~~D~G~Y~C~~~~~~~~~~-~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W 156 (215)
T 3nl4_H 78 KITSPTTEDTATYFCVRKYGSEWGG-DLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTW 156 (215)
T ss_dssp EESSCCGGGCEEEEEEEECSSSSCE-EEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEE
T ss_pred EECCCCcccCEEEEEEEecCCCccc-eEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEE
Confidence 34444 6788899988755322100 01211111 111123456766644443 33333 8999999997554 5779
Q ss_pred EccCCeEeecccCceEEeeCCcEEE---cCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 78 RFSNNTVIAYVKDLRIALSNGSLMF---PPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 78 ~~~dg~~i~~~~~~~~~~~~GsL~i---~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+ +||..+...........+|++.+ ..+... | |.|+|.|+|..|..
T Consensus 157 ~-~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~------d-g~ytC~v~~~~~~~ 204 (215)
T 3nl4_H 157 N-SGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSS------S-QPVTCNVAHPATNT 204 (215)
T ss_dssp G-GGTBCTTEEECCCEECTTSCEEEEEEEEECC----------CCEEEEEEGGGTE
T ss_pred e-eCCEECCeEecCceECCCCCEEEEEEEEEecc------C-CEEEEEEEeCCCCc
Confidence 6 57764432211223445676666 334332 6 99999999999875
No 286
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.01 E-value=1e-09 Score=81.11 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=53.5
Q ss_pred CCCEEEEcCCC-CC--ccCeEEEeeEeccCCCE-EEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 45 HYPFRIKSAPG-GN--RTRGLELTRQTRYEPSQ-LGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 45 ~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~-i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+|.+...|.+ .. +..+.|.|.+.|.|.|. |+|++ ||..+... .++|.|.++..+ |+|.|+
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~~--------~~~L~i~~v~~~------D~G~Y~ 70 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISSQ--------ASSYFIDAATVD------DSGEYR 70 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESCC--------SSEEEESSCCGG------GCEEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEcccC--------ccEEEEeccccc------CCEEEE
Confidence 45777777775 22 33499999999999887 99985 77776432 278999888665 899999
Q ss_pred EEEEcCCCc
Q psy5697 121 CRASNEAGV 129 (145)
Q Consensus 121 C~A~N~~G~ 129 (145)
|.|.|...+
T Consensus 71 C~a~n~~~s 79 (204)
T 3sgj_C 71 CQTQLSTLS 79 (204)
T ss_dssp EEETTSBCC
T ss_pred EEeCCCccc
Confidence 999996444
No 287
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.00 E-value=9.2e-10 Score=85.37 Aligned_cols=113 Identities=17% Similarity=0.020 Sum_probs=64.5
Q ss_pred eecCceeEeeccccCcc-----cCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCC
Q psy5697 10 LADADTYIIADRSLFPR-----PLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~-----~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg 82 (145)
..|++.|.|...+.... ....+. ..+ .....+|.+...|......| +.|.|.+.+ |.+.+.|++ ||
T Consensus 183 ~~D~G~Y~C~a~n~~g~~~~s~~s~~~~--l~V---~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~-~~~~~~W~k-~g 255 (316)
T 3vh8_G 183 LALAGTYRCYGSVTHTPYQLSAPSDPLD--IVV---TGPYEKPSLSAQPGPKVQAGESVTLSCSSRS-SYDMYHLSR-EG 255 (316)
T ss_dssp GGGCEEEEEEEECTTCTTBCCCCCCCEE--EEE---ECSSCCCEEEEESCSCCCTTSCCEEEEEESS-CCSEEEEEE-TT
T ss_pred hhhCceEEEEEecCCCCccccCCCCCEE--EEe---cCCCCCCeEEeCCCCeecCCCcEEEEEECCC-CCcEEEEEE-CC
Confidence 57888999987654221 111112 111 11235677777766533333 999999985 889999985 77
Q ss_pred eEeecccCceEEeeC----CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc----eEEEEEEEE
Q psy5697 83 TVIAYVKDLRIALSN----GSLMFPPFPETGFRPDVHSTVYRCRASNEAGV----ILSRFVHVK 138 (145)
Q Consensus 83 ~~i~~~~~~~~~~~~----GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~----~~s~~v~v~ 138 (145)
..+.... ....... ++|.|.++. |+|.|+|.|+|..+. ..|..+.|.
T Consensus 256 ~~~~~~~-~~~~~~~~~~~~~L~i~~v~--------D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 310 (316)
T 3vh8_G 256 GAHERRL-PAVRKVNRTFQADFPLGPAT--------HGGTYRCFGSFRHSPYEWSDPSDPLLVS 310 (316)
T ss_dssp SSCCEEE-ECEECTTSCEEEEEECC-------------CEEEEEEEBTTBTTEECCCCCCEEC-
T ss_pred CcCCCce-eceeccCCceeEEEEcCCcC--------CCEEEEEEeecCCCchhccCCCCcEEEE
Confidence 6543211 1111112 478886653 799999999998875 234445444
No 288
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.00 E-value=1.3e-09 Score=77.85 Aligned_cols=72 Identities=11% Similarity=0.048 Sum_probs=55.1
Q ss_pred CCCCEEEEcCCC-CCccC--eEEEeeEeccCCCE-EEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 44 EHYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQ-LGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 44 ~~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~-i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
..+|.+...|.. ....| +.|.|.+.|.|.|. ++|++ ||..+.. .+++|.|.++..+ |+|.|
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~~--------~~~~L~i~~~~~~------d~G~Y 69 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLISS--------QASSYFIDAATVN------DSGEY 69 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEE-TTEEEES--------SCSEEEESSCCGG------GCEEE
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEE-CCEEccC--------CceEEEEeCCCcc------cCEEE
Confidence 346788878776 33333 89999999999887 89984 7776542 3568999888665 89999
Q ss_pred EEEEEcCCCce
Q psy5697 120 RCRASNEAGVI 130 (145)
Q Consensus 120 ~C~A~N~~G~~ 130 (145)
+|.|.|..++.
T Consensus 70 ~C~~~n~~~s~ 80 (175)
T 1fnl_A 70 RCQTNLSTLSD 80 (175)
T ss_dssp EEECSSSCCCC
T ss_pred EEEeeCCcccc
Confidence 99999977643
No 289
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.99 E-value=1.5e-09 Score=81.36 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=61.7
Q ss_pred eceee-eecCceeEeeccccCcccCCceeeeEEEecc------------CCCCCCCEEEEcCCC-CC--ccCeEEEeeEe
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSR------------SENEHYPFRIKSAPG-GN--RTRGLELTRQT 68 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~------------~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~ 68 (145)
+|..+ ..|++.|+|...+......+...--.+.... .....+|.++..|+. .. +..+.|.|.+.
T Consensus 77 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 156 (250)
T 3esu_F 77 TISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDS 156 (250)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECC
T ss_pred EEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEec
Confidence 34444 6789999999866433321111100011100 001134455566655 22 23399999999
Q ss_pred ccC--CCEEEEEccC-CeEeec----------------ccCceEEeeCC-----cEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 69 RYE--PSQLGWRFSN-NTVIAY----------------VKDLRIALSNG-----SLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 69 G~P--~P~i~W~~~d-g~~i~~----------------~~~~~~~~~~G-----sL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
|.| .|.|.|++.. |..+.. .++......++ +|.|.++..+ |+|.|+|.|.
T Consensus 157 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~ 230 (250)
T 3esu_F 157 GYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSV------DSAVYFCARS 230 (250)
T ss_dssp STTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG------GCEEEEEEEE
T ss_pred CCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcc------cCEEEEEEEe
Confidence 988 8999998642 322210 01111222111 6999988765 8999999999
Q ss_pred c
Q psy5697 125 N 125 (145)
Q Consensus 125 N 125 (145)
|
T Consensus 231 ~ 231 (250)
T 3esu_F 231 G 231 (250)
T ss_dssp C
T ss_pred c
Confidence 8
No 290
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.99 E-value=3.5e-10 Score=83.86 Aligned_cols=115 Identities=13% Similarity=0.213 Sum_probs=57.6
Q ss_pred eeceee-eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEeccCC-C-EEEE
Q psy5697 4 FHISTL-LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTRYEP-S-QLGW 77 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G~P~-P-~i~W 77 (145)
++|..+ ..|++.|.|...+......+... ...+ .....+|.+...++. .. +..+.|.|.+.|.++ | +|+|
T Consensus 95 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~l~V---~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 170 (233)
T 3bqu_C 95 FTIENMLSEDVADYYCLQSDNLPYTFGGGT-NLEI---KRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKW 170 (233)
T ss_dssp EC-----CCCCSEEEEEECSSSSCCBCCCC-BC------CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEE
T ss_pred EEECCCCHHHCEEEEEEEecCCceeecCCE-EEEE---eCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEE
Confidence 344444 67899999988654332111000 0000 111246777665544 11 223999999999654 3 7999
Q ss_pred EccCCeEeecc-cCce--EEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 78 RFSNNTVIAYV-KDLR--IALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 78 ~~~dg~~i~~~-~~~~--~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
++ ||..+... .... ....+| +|.|.+...+ |.|.|+|.|+|....
T Consensus 171 ~k-~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 171 KI-DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTST 224 (233)
T ss_dssp EE-C-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCCEEEEEEEC---
T ss_pred EE-CCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhC------CCCCEEEEEEeCCCC
Confidence 85 77766432 0000 011223 4667655433 799999999998654
No 291
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.99 E-value=1.4e-09 Score=79.82 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=53.8
Q ss_pred eEEEeeE--eccCCCEEEEEcc-CCeEeec---------ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 61 GLELTRQ--TRYEPSQLGWRFS-NNTVIAY---------VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 61 ~~L~C~a--~G~P~P~i~W~~~-dg~~i~~---------~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
++|.|.+ .+.|.|.|+|++. ++..+.. ..+...+..+|+|.|.+++.+ |+|.|+|.|.|..|
T Consensus 17 v~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~------DsG~Y~c~~~n~~g 90 (182)
T 1hnf_A 17 INLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTD------DQDIYKVSIYDTKG 90 (182)
T ss_dssp EEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGG------GCEEEEEEEEETTS
T ss_pred EEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChh------hCEEEEEEEEeCCC
Confidence 8999964 3567899999851 6666521 123446678999999998765 89999999999999
Q ss_pred ceE-EEEEEEEec
Q psy5697 129 VIL-SRFVHVKAD 140 (145)
Q Consensus 129 ~~~-s~~v~v~~~ 140 (145)
... ++.+.|...
T Consensus 91 ~~~~~~~~~L~V~ 103 (182)
T 1hnf_A 91 KNVLEKIFDLKIQ 103 (182)
T ss_dssp CEEEEEEEEEEEE
T ss_pred ceeEEEEEEEEEc
Confidence 874 355555433
No 292
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.98 E-value=5.4e-10 Score=75.02 Aligned_cols=85 Identities=13% Similarity=0.012 Sum_probs=55.6
Q ss_pred CCCEEEEcCCCCCccC--eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 45 HYPFRIKSAPGGNRTR--GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 45 ~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.+|.+...|...+..| ++|.|.+.+. .+.+.|++ +|+.+.... ......+.+|.|.++..+ |+|.|+|.
T Consensus 4 ~kP~i~~~p~~~v~~G~~VtL~C~~~~~-~~~~~w~k-~g~~~~~~~-~~~~~~~~~l~I~~v~~~------dsG~Y~C~ 74 (105)
T 2vsd_A 4 PQPSLSLHPSQGVSLGDTVTLRCHLPRM-AAWVQLWL-NGTLRFDKE-KDKEQDAAEFSFAVTNLE------DAGTYQCR 74 (105)
T ss_dssp CCCEEEEESCSSCCTTCEEEEEEECCSS-CEEEEEEE-TTEEEEEEE-ECTTCSEEEEEEECCSGG------GCEEEEEE
T ss_pred CCCEEEeCCCCCcCcCCCEEEEEEcCCC-CcEEEEEE-CCccceeee-ccCCCCEEEEEECCCCHH------HCeEEEEE
Confidence 3577777776644444 9999999886 47899985 776543110 000011237899888765 89999999
Q ss_pred EEcCCC---ceEEEEEEEE
Q psy5697 123 ASNEAG---VILSRFVHVK 138 (145)
Q Consensus 123 A~N~~G---~~~s~~v~v~ 138 (145)
+.|... +..|..+.+.
T Consensus 75 ~~n~~~~~~s~~Sdpl~L~ 93 (105)
T 2vsd_A 75 YQVSEPLWTSNQSDPVELV 93 (105)
T ss_dssp EEEETTEEECCCCCCEEEC
T ss_pred EEcCCCCcccCCCCCEEEE
Confidence 999753 3345555554
No 293
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.98 E-value=1.5e-09 Score=83.82 Aligned_cols=109 Identities=16% Similarity=0.024 Sum_probs=65.7
Q ss_pred eeceee-eecCceeEeecccc-Cc----ccCCceeeeEEEeccCCCCCCCEEEEcCCCCCccC--eEEEeeEeccCCCEE
Q psy5697 4 FHISTL-LADADTYIIADRSL-FP----RPLGYLVGNIVYSSRSENEHYPFRIKSAPGGNRTR--GLELTRQTRYEPSQL 75 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~-~p----~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~g--~~L~C~a~G~P~P~i 75 (145)
|.|..+ ..|++.|.|..... .+ .....+. ..+. ....+|.+...|...+..| ++|.|.+.|. ++++
T Consensus 64 L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~--L~V~---~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~-~~~~ 137 (257)
T 1b6u_A 64 FSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLD--IVIT---GLYEKPSLSAQPGPTVLAGESVTLSCSSRSS-YDMY 137 (257)
T ss_dssp EEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEE--EEEE---CSSCCCEEECSSCTTCBTTCEEEEEEECSSC-CSEE
T ss_pred EEeecCCcccCEEEEEeEeccCCCccccccCCCEE--Eecc---cCCCCcceEccCCCccCCCCEEEEEEeCCCC-CcEE
Confidence 455544 57889999986432 11 1111222 1111 1234678777776544444 9999999986 4899
Q ss_pred EEEccCCeEeecccCceEE---eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 76 GWRFSNNTVIAYVKDLRIA---LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 76 ~W~~~dg~~i~~~~~~~~~---~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.|+| ||+.+......... ..+++|.|.++. |+|.|+|.|+|..
T Consensus 138 ~w~k-~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--------D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 138 HLSR-EGEAHERRFSAGPKVNGTFQADFPLGPAT--------HGGTYRCFGSFRD 183 (257)
T ss_dssp EEEE-TTSSCEECCBCBCCSSSCCBEEEEEEECC--------SCEEEEEEEECSS
T ss_pred EEEE-CCcccCcccccccccCCceeEEEEecccc--------cCEEEEEEEEcCC
Confidence 9985 77655422111111 124589997763 7999999999864
No 294
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.98 E-value=7e-10 Score=82.68 Aligned_cols=73 Identities=15% Similarity=0.053 Sum_probs=49.2
Q ss_pred CeEEEe---eEeccCCCEEEEEccCCeEee--------------cc--cCce-EEeeC--CcEEEcCCCCCCCCCCCCCe
Q psy5697 60 RGLELT---RQTRYEPSQLGWRFSNNTVIA--------------YV--KDLR-IALSN--GSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 60 g~~L~C---~a~G~P~P~i~W~~~dg~~i~--------------~~--~~~~-~~~~~--GsL~i~~~~~~~~~~~~d~G 117 (145)
.++|.| .+.|.|.|.|+|+| +|..+. .. .+.. ..... .+|.|.++..+ |+|
T Consensus 10 ~v~L~C~~~~v~~~p~~~V~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G 82 (203)
T 4fa8_A 10 RVTLTSYWRRVSLGPEIEVSWFK-LGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANIS------HDG 82 (203)
T ss_dssp CEEEEEECSSTTCSTTSEEEEEE-EETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGG------GCE
T ss_pred CEEEEeeeeccCCCCCcEEEEEE-cCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHH------HCe
Confidence 399999 47899999999985 442211 00 0111 11122 37999888765 899
Q ss_pred EEEEEEEcCCCce-EEEEEEEEe
Q psy5697 118 VYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 118 ~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
.|+|.|+|..|.. .+..+.|..
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~ 105 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVVK 105 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEEEecC
Confidence 9999999999987 344566654
No 295
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.98 E-value=1.9e-09 Score=85.07 Aligned_cols=64 Identities=8% Similarity=-0.020 Sum_probs=49.0
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
.+.|.|.+.|.|.|.|+|++ +|..+ ...+++|.|.++..+ |+|.|+|.|.|..+.. .+..+.|.
T Consensus 113 ~v~l~C~~~~~p~~~v~W~~-~~~~~--------~~~~~~L~i~~v~~~------d~G~Y~C~a~~~~~~~~~~~~l~v~ 177 (363)
T 1wio_A 113 SLTLTLESPPGSSPSVQCRS-PRGKN--------IQGGKTLSVSQLELQ------DSGTWTCTVLQNQKKVEFKIDIVVL 177 (363)
T ss_dssp CEEEEEECCTTCCCCEEEEC-SSSCE--------EEESSEEEECSBCGG------GCEECEEEEEETTEEEEECCEECEE
T ss_pred CEEEEEEcCCCCCCeEEEEc-CCCcc--------cccceEEEEeeCChh------cCCEEEEEEecCCCeEEEEEEEEEe
Confidence 38999999999999999985 54332 235679999888765 8999999999987665 33345554
No 296
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.97 E-value=8.9e-10 Score=81.34 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=41.3
Q ss_pred CeEEEeeEeccCC---CEEEEEccCCeEeecccCce------EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRYEP---SQLGWRFSNNTVIAYVKDLR------IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~P~---P~i~W~~~dg~~i~~~~~~~------~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.|.|+ ++|+|++ ||..+....... ......+|.|.+... .|.|.|+|.|+|.+|..
T Consensus 108 ~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~------d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 108 PITVKCSVADVYPFDRLEIDLLK-GDHLMKSQEFLEDADRKSLETKSLEVTFTPVIE------DIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp CEEEEEEEEEEBSGGGEEEEEEE-TTEEEEEEECCSCCSSCCCEEEEEEEEECCCGG------GTTCEEEEEEEECSCCC
T ss_pred CEEEEEEECCcCCCCCeEEEEEe-CCeECcccccccccCcCcceEEEEEEEEEeeec------cCCCeEEEEEEccccCC
Confidence 3899999998754 4899984 777765321100 011122456655432 27899999999999873
No 297
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.97 E-value=4.9e-10 Score=82.67 Aligned_cols=72 Identities=8% Similarity=-0.060 Sum_probs=49.5
Q ss_pred cCeEEEeeEeccCCCEEEEEcc--CCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy5697 59 TRGLELTRQTRYEPSQLGWRFS--NNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVH 136 (145)
Q Consensus 59 ~g~~L~C~a~G~P~P~i~W~~~--dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~ 136 (145)
..+.|.|.+.| |.|.|+|++. ||..+.... ......+++|.|.++..+ |+|.|+|.|.|..+...+..+.
T Consensus 25 ~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~-~~~~~~~~~l~I~~v~~~------D~G~Y~C~a~n~~~~~~s~~~~ 96 (213)
T 2x1w_L 25 KTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN-RISWDSKKGFTIPSYMIS------YAGMVFCEAKINDESYQSIMYI 96 (213)
T ss_dssp CEEEECCCBSS-TTCCEEEEEETTTEEECCCSS-SCEEETTTEEEEEGGGTT------TCSEEEEEEC----CEECCCEE
T ss_pred ccEEEeeccCC-CCcEEEEEhhcCCCccccCCC-cccccCCccEEEccCChh------cCceEEEEEEECCeeEEEEEEE
Confidence 33899999988 8899999875 677665432 223445678999988766 8999999999976665554344
Q ss_pred EE
Q psy5697 137 VK 138 (145)
Q Consensus 137 v~ 138 (145)
|.
T Consensus 97 l~ 98 (213)
T 2x1w_L 97 VV 98 (213)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 298
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.97 E-value=5.5e-09 Score=77.73 Aligned_cols=115 Identities=12% Similarity=0.160 Sum_probs=63.0
Q ss_pred eecCceeEeeccccCc---ccCCceeeeEEEe-ccCCCCCCCEEEE-cCCCCCcc--CeEEEeeEecc-CCC-EEEEEcc
Q psy5697 10 LADADTYIIADRSLFP---RPLGYLVGNIVYS-SRSENEHYPFRIK-SAPGGNRT--RGLELTRQTRY-EPS-QLGWRFS 80 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p---~~~~~~~~~~~~~-~~~~~~~~P~~i~-~p~~~~~~--g~~L~C~a~G~-P~P-~i~W~~~ 80 (145)
..|.++|.|....... .. ..++..+.- .......+|.+.. .|...... .+.|.|.+.|. |.| +|+|++.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~--~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 165 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPN--DYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYK 165 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCE--EEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred HHHCEEEEEEEeccccCcccc--eeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEcc
Confidence 6788899888754310 00 012111110 1112234565543 34332223 38999999998 877 9999865
Q ss_pred CCeEeec---ccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 81 NNTVIAY---VKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 81 dg~~i~~---~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
||..+.. .+.. .......+|.|.+... ...|.|.|+|.|+|..|..
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~----~~~d~g~y~C~v~n~~~~~ 217 (223)
T 1dee_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDV----AQGTNEHVVCKVQHPNGNK 217 (223)
T ss_dssp TSCBCSCEEECCCEEETTEEEEEEEEEEECTTT----TSTTCCEEEEEEECTTCCE
T ss_pred CCCccceeEECCccccCCeEEEEEEEEEcHHHh----ccCCCCEEEEEEEeCCCCC
Confidence 8877643 1100 0011123466654321 0026899999999999975
No 299
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.97 E-value=1.1e-09 Score=80.08 Aligned_cols=75 Identities=8% Similarity=0.012 Sum_probs=51.0
Q ss_pred CCCEEEEcCCCCC--ccCeEEEeeEeccCCCEEEEEccCCeEeecccCc-eEE--eeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 45 HYPFRIKSAPGGN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVKDL-RIA--LSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 45 ~~P~~i~~p~~~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~-~~~--~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
.+|.|...|.... +..++|.|.+.+ |.|.|+|+| ||..+...... ... ..+++|.|.++..+ |+|.|
T Consensus 7 ~~P~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~------D~G~Y 78 (201)
T 1nkr_A 7 RKPSLLAHPGPLVKSEETVILQCWSDV-MFEHFLLHR-EGMFNDTLRLIGEHHDGVSKANFSISRMTQD------LAGTY 78 (201)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEEESS-CCSEEEEEE-ESSSCEEEEEECEEETTEEEEEEEESSCCGG------GCEEE
T ss_pred CCCeEEEEcCCccCCCCcEEEEEeccC-CCCEEEEEE-CCCcCCcceeeeecCCCCceEEEEeccCCcc------cCeEE
Confidence 4677777776433 233999999985 889999985 66554311100 011 23568999888765 89999
Q ss_pred EEEEEcCC
Q psy5697 120 RCRASNEA 127 (145)
Q Consensus 120 ~C~A~N~~ 127 (145)
+|.|.|..
T Consensus 79 ~C~a~~~~ 86 (201)
T 1nkr_A 79 RCYGSVTH 86 (201)
T ss_dssp EEEEEBTT
T ss_pred EEeEecCC
Confidence 99999863
No 300
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.97 E-value=4.3e-09 Score=79.21 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=42.0
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEeeC-----CcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALSN-----GSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~~-----GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|.| .|.|.|++.+ +..+. ..++......+ .+|.|.++..+ |
T Consensus 151 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D 224 (256)
T 3ux9_B 151 SLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAE------D 224 (256)
T ss_dssp CEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred eEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChh------h
Confidence 399999999988 8999998743 32221 00111122211 14999988765 8
Q ss_pred CeEEEEEEEcCC
Q psy5697 116 STVYRCRASNEA 127 (145)
Q Consensus 116 ~G~Y~C~A~N~~ 127 (145)
+|.|+|.|.|..
T Consensus 225 sG~Y~C~~~~~~ 236 (256)
T 3ux9_B 225 TAVYYCARYIDF 236 (256)
T ss_dssp CEEEEEEEEETT
T ss_pred CEEEEEEEEcCC
Confidence 999999999974
No 301
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.96 E-value=5.3e-10 Score=82.79 Aligned_cols=79 Identities=14% Similarity=0.244 Sum_probs=49.0
Q ss_pred CCCEEEEcCCC-C--CccCeEEEeeEeccCCC--EEEEEccCCeEeecccCc--eEEeeCC------cEEEcCCCCCCCC
Q psy5697 45 HYPFRIKSAPG-G--NRTRGLELTRQTRYEPS--QLGWRFSNNTVIAYVKDL--RIALSNG------SLMFPPFPETGFR 111 (145)
Q Consensus 45 ~~P~~i~~p~~-~--~~~g~~L~C~a~G~P~P--~i~W~~~dg~~i~~~~~~--~~~~~~G------sL~i~~~~~~~~~ 111 (145)
.+|.+...++. . .+..+.|.|.+.|.++| +|+|++ ||..+...... .....+| +|.|.+...+
T Consensus 134 ~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~--- 209 (234)
T 2j6e_L 134 AAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKA-DGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWK--- 209 (234)
T ss_dssp CCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEE-TTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTT---
T ss_pred CCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEE-CCEECCCCccccCceECCCCCEEEEEEEEECHHHcC---
Confidence 45655544433 1 12248999999996543 999985 88877532100 0111222 4666655433
Q ss_pred CCCCCeEEEEEEEcCCCce
Q psy5697 112 PDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 112 ~~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|+|..+..
T Consensus 210 ---d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 210 ---SHRSYSCQVTHEGSTV 225 (234)
T ss_dssp ---TSCCEEEEEEBTTBCC
T ss_pred ---CCCeEEEEEEeCCCce
Confidence 8999999999998764
No 302
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.96 E-value=3.9e-09 Score=79.07 Aligned_cols=111 Identities=12% Similarity=0.089 Sum_probs=59.8
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccC------CCCCCCEEEEcCCC-CCcc--CeEEEeeEeccC--CCEEEEE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRS------ENEHYPFRIKSAPG-GNRT--RGLELTRQTRYE--PSQLGWR 78 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~~P~~i~~p~~-~~~~--g~~L~C~a~G~P--~P~i~W~ 78 (145)
..|+++|.|...+..+...+...--.|..... ....++.++..++. .... .+.|.|.+.|.| .|.|.|+
T Consensus 85 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 164 (247)
T 1svz_A 85 AEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWV 164 (247)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEE
T ss_pred HHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEE
Confidence 57888999988664332111100000111100 00123444444443 3333 399999999986 5799998
Q ss_pred ccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 79 FSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 79 ~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
+.+ |..+. ..++...... .++|.|.++..+ |+|.|.|.|.|.
T Consensus 165 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~n~ 228 (247)
T 1svz_A 165 KQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNE------DTATYFCVRDRH 228 (247)
T ss_dssp EECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGG------GCEEEEEEEEEG
T ss_pred EeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChh------HCEEEEEEEecc
Confidence 743 22110 0011112211 238999988765 899999999996
No 303
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.96 E-value=5.2e-10 Score=82.19 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=51.8
Q ss_pred CeEEEeeEeccCC-CEEEEEccCC--e--Eeec----c---cCceE----------EeeCCcEEEcCCCCCCCCCCCCCe
Q psy5697 60 RGLELTRQTRYEP-SQLGWRFSNN--T--VIAY----V---KDLRI----------ALSNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 60 g~~L~C~a~G~P~-P~i~W~~~dg--~--~i~~----~---~~~~~----------~~~~GsL~i~~~~~~~~~~~~d~G 117 (145)
.+.|.|.+.|.|. |.|+|++.+. . .+.. . ..... ...+|+|.|.++..+ |+|
T Consensus 17 ~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G 90 (231)
T 2pet_A 17 SVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVG------DER 90 (231)
T ss_dssp CEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGG------GCE
T ss_pred CEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcc------cCc
Confidence 3999999999995 9999986432 2 2210 0 11112 455678999988765 899
Q ss_pred EEEEEEEcCC-Cce-EEEEEEEEeccC
Q psy5697 118 VYRCRASNEA-GVI-LSRFVHVKADSR 142 (145)
Q Consensus 118 ~Y~C~A~N~~-G~~-~s~~v~v~~~~~ 142 (145)
.|+|.|.|.. |.. .+..+.|...+.
T Consensus 91 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 117 (231)
T 2pet_A 91 DYVCVVRAGAAGTAEATARLNVFAKPE 117 (231)
T ss_dssp EEEEEEECGGGCEEEEEEEEEEEBCCC
T ss_pred eEEEEEEecCCCceEEEEEEEEEecCC
Confidence 9999999998 554 333555554443
No 304
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.96 E-value=1.1e-09 Score=87.87 Aligned_cols=111 Identities=15% Similarity=0.112 Sum_probs=64.0
Q ss_pred eecCceeEeeccccCcc-cCCceeeeEE-EeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEecc-CCC-EEEEEccCC
Q psy5697 10 LADADTYIIADRSLFPR-PLGYLVGNIV-YSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRY-EPS-QLGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~-~~~~~~~~~~-~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~-P~P-~i~W~~~dg 82 (145)
..|++.|.|...+.... ... .+|..+ .........+|.+...++. ....| +.|.|.+.|. |.| +|+|+ +||
T Consensus 306 ~~D~G~Y~C~a~n~~~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~-~~g 383 (438)
T 1qgc_4 306 SADTAMYYCVRREDGGDEGFA-YWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWN-SGS 383 (438)
T ss_dssp GGGCCEEEEEECCSSSCCCCC-SBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEG-GGT
T ss_pred hhhCEEEEEEEEccCCCccce-eeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEe-cCC
Confidence 57888999988652110 000 011100 0111122356765555443 22233 8999999998 988 99996 577
Q ss_pred eEeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 83 TVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 83 ~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
..+...... ....+| .|.|.+...+ | |.|+|.|+|++|..
T Consensus 384 ~~~~~~~~~-~~~~~g~~~~~s~L~i~~~~~~------d-g~Y~C~a~n~~g~~ 429 (438)
T 1qgc_4 384 LSSGVHTFP-AVLQSDLYTLSSSVTVPSSTWP------S-ETVTCNVAHPASST 429 (438)
T ss_dssp CCSSEEECC-CEEETTEEEEEEEEEEEEEHHH------H-SCCEEEEEEGGGTE
T ss_pred CCCceeecC-ccccCCcEEEEEEEEEehhhcC------C-ceEEEEEEeCCCCc
Confidence 765421111 111234 4777655332 6 99999999999985
No 305
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.95 E-value=1.1e-09 Score=94.74 Aligned_cols=90 Identities=12% Similarity=0.051 Sum_probs=61.9
Q ss_pred CCCEEEEcCCC-CCccC--eEEEeeEeccCCCEEE-EEc-cCCeEeecccCceEEe---eCCcEEEcCCCCCCCCCCCCC
Q psy5697 45 HYPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLG-WRF-SNNTVIAYVKDLRIAL---SNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~-W~~-~dg~~i~~~~~~~~~~---~~GsL~i~~~~~~~~~~~~d~ 116 (145)
.+|.|. .|++ .+..| +.|.|.|.|+|.|.|+ |++ +||..+.... ...+. ..++|.|.++... |+
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~-~~~~~~~~~~~~l~I~~~~~~------d~ 235 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKE-IKVTSSRRFIASFNVVNTTKR------DA 235 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEE-EEECCSSEEEEEEEECSCCTT------TC
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccc-eEEeccccceEEEEEcccccc------cC
Confidence 567777 4555 23333 9999999999999998 864 5887765321 11111 1368999888765 89
Q ss_pred eEEEEEEEcCCCce--EEEEEEEEeccC
Q psy5697 117 TVYRCRASNEAGVI--LSRFVHVKADSR 142 (145)
Q Consensus 117 G~Y~C~A~N~~G~~--~s~~v~v~~~~~ 142 (145)
|.|+|.|.|.+|.. ....+.|...+.
T Consensus 236 g~Y~c~A~n~~G~~~s~~~~l~V~~~P~ 263 (731)
T 2v5y_A 236 GKYRCMIRTEGGVGISNYAELVVKEPPV 263 (731)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEECCCC
T ss_pred eEEEEEEECCCCCcceeeEEEEEecCCC
Confidence 99999999999983 334566654433
No 306
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.94 E-value=3e-09 Score=83.74 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=61.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEE-EeccCCCCCCCEEEEcCCC-CCccC--eEEEeeEecc-CC-CEEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIV-YSSRSENEHYPFRIKSAPG-GNRTR--GLELTRQTRY-EP-SQLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G~-P~-P~i~W~~~dg~ 83 (145)
..|++.|.|....... .++..+ .........+|.+...+++ ....| +.|.|.+.|. |. |+|+|+ +||.
T Consensus 88 ~~D~G~Y~C~~~n~~~-----~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~-k~g~ 161 (344)
T 1za6_B 88 SEDTAVYFCTRSLNMA-----YWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN-SGAL 161 (344)
T ss_dssp GGGCEEEEEEETTTTC-----EECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEET-TTTB
T ss_pred cccCEEEEEEEecCcc-----eecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEe-cCCc
Confidence 6688888888765211 111111 0111122356765544433 33333 8999999998 64 799996 5776
Q ss_pred EeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+...........+| +|.|.++..+ | |.|+|.|+|..|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 162 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSNT 207 (344)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEETTHHH------H-BCEEEEEEEGGGTE
T ss_pred cCceeECCCeECCCCCEEEEEEEEEcHHHcC------C-CcEEEEEEeCCCCc
Confidence 532100001111223 6777655332 6 99999999999874
No 307
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.94 E-value=1.4e-08 Score=76.11 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=64.6
Q ss_pred eecCceeEeeccc--c-CcccCCceeeeEEEe-ccCCCCCCCEEE-EcCCCC--Cc-cCeEEEeeEecc-CCC-EEEEEc
Q psy5697 10 LADADTYIIADRS--L-FPRPLGYLVGNIVYS-SRSENEHYPFRI-KSAPGG--NR-TRGLELTRQTRY-EPS-QLGWRF 79 (145)
Q Consensus 10 ~~~~~~~~~~~~~--~-~p~~~~~~~~~~~~~-~~~~~~~~P~~i-~~p~~~--~~-~g~~L~C~a~G~-P~P-~i~W~~ 79 (145)
..|.++|.|.... - .+... .+|..+.- .......+|.+. ..|... .+ ..+.|.|.+.|. |.| +|+|++
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~--~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~ 164 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWN--YWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKY 164 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCS--EECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEE
T ss_pred cccCEEEEEEEecCCcCCchhh--hcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEc
Confidence 6788899998752 1 11100 12211111 011123456544 344432 23 348999999986 887 999986
Q ss_pred cCCeEeecc---cCce---EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEE
Q psy5697 80 SNNTVIAYV---KDLR---IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVH 136 (145)
Q Consensus 80 ~dg~~i~~~---~~~~---~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~ 136 (145)
.||..+... +... ......+|.|.+... ...|.|.|.|.|+|..|.. ....+.
T Consensus 165 ~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~----~~~d~g~ytC~v~n~~~~~~~~~~i~ 224 (232)
T 1dn0_B 165 KNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDV----MAGTDEHVVCKVQHPNGNKEKNVPLP 224 (232)
T ss_dssp TTSCEECCEEECCCEEETTEEEEEEEEEECTTCC-------CCCEEEEEEECTTCCEEEEEECC
T ss_pred CCCCceeeEEECCccccCCcEEEEEEEEEcHHHh----cccCCCeEEEEEEeCCCCcceeEecC
Confidence 588776431 1000 111123577755431 0026899999999999986 433333
No 308
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.94 E-value=1.8e-09 Score=78.81 Aligned_cols=66 Identities=11% Similarity=0.133 Sum_probs=45.3
Q ss_pred CeEEEeeEeccC---CCEEEEEccC-CeEee-----------cccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 60 RGLELTRQTRYE---PSQLGWRFSN-NTVIA-----------YVKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 60 g~~L~C~a~G~P---~P~i~W~~~d-g~~i~-----------~~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+.|.|.+.|.| .|.|+|++.+ |..+. ..+..... ..++ +|.|.++..+ |+|.|+|
T Consensus 17 ~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C 90 (212)
T 1q0x_L 17 TVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTE------DEAIYFC 90 (212)
T ss_dssp CEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEE
T ss_pred CEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCcc------CCEEEEE
Confidence 399999999998 4899998643 33321 11111222 2222 8999988765 8999999
Q ss_pred EEEcCCCceE
Q psy5697 122 RASNEAGVIL 131 (145)
Q Consensus 122 ~A~N~~G~~~ 131 (145)
.|.|..|...
T Consensus 91 ~~~~~~~~~~ 100 (212)
T 1q0x_L 91 ALWSNNKLVF 100 (212)
T ss_dssp EEECSSCEEE
T ss_pred EEecCchhhc
Confidence 9999987543
No 309
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.94 E-value=2.6e-09 Score=78.82 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=50.8
Q ss_pred CEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeEe---e--------cccCceEE-e--eCCcEEEcCCCCC
Q psy5697 47 PFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTVI---A--------YVKDLRIA-L--SNGSLMFPPFPET 108 (145)
Q Consensus 47 P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~i---~--------~~~~~~~~-~--~~GsL~i~~~~~~ 108 (145)
+.+.+.|.. .. +..+.|.|.+.|.|.|.|.|++.+ |... . ........ . .+++|.|.++..+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 445555554 22 333999999999999999998743 2111 0 00111111 1 2347999988765
Q ss_pred CCCCCCCCeEEEEEEEcCCCce
Q psy5697 109 GFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|.|..|..
T Consensus 105 ------D~G~Y~C~~~~~~~~~ 120 (237)
T 3sob_L 105 ------DFATYYCQQSYTTPPT 120 (237)
T ss_dssp ------GCEEEEEEECSSSSCE
T ss_pred ------hCeEEEEeeccCCceE
Confidence 8999999999988754
No 310
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.93 E-value=3.1e-09 Score=71.62 Aligned_cols=62 Identities=15% Similarity=0.098 Sum_probs=42.7
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEee---------cccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVIA---------YVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i~---------~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
.+.|.|.+.+.+ +.|.|++.+ |..+. ...+......++ +|.|.++..+ |+|.|.|.+
T Consensus 18 ~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~ 90 (113)
T 1h5b_A 18 DSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLE------DSGTYFCAA 90 (113)
T ss_dssp CEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGG------GCEEEEEEE
T ss_pred cEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChh------hCEEEEEEE
Confidence 399999999865 799998754 22111 111222222222 8999988765 899999999
Q ss_pred EcCCC
Q psy5697 124 SNEAG 128 (145)
Q Consensus 124 ~N~~G 128 (145)
.|..|
T Consensus 91 ~n~~~ 95 (113)
T 1h5b_A 91 EASSG 95 (113)
T ss_dssp ECSSS
T ss_pred ecCCC
Confidence 99887
No 311
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.93 E-value=1e-08 Score=74.19 Aligned_cols=73 Identities=23% Similarity=0.227 Sum_probs=50.7
Q ss_pred CeEEEeeEeccCCCEEEEEccCC----eEee-------------cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNN----TVIA-------------YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg----~~i~-------------~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.+.|.|.+.|.|.+.|+|++.+. ..+. ...+...+..+|+|.|.++..+ |+|.|+|.
T Consensus 16 ~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~------D~G~Y~C~ 89 (208)
T 3r4d_A 16 NVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMK------DMGVYTLD 89 (208)
T ss_dssp CEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGG------GCEEEEEE
T ss_pred cEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccccc------CCeEEEEE
Confidence 39999999999999999986421 1110 0112234556789999988765 89999999
Q ss_pred EEcCCCceEEEEEEEE
Q psy5697 123 ASNEAGVILSRFVHVK 138 (145)
Q Consensus 123 A~N~~G~~~s~~v~v~ 138 (145)
+.|..+...+..+.+.
T Consensus 90 ~~~~~~~~~~~~~~l~ 105 (208)
T 3r4d_A 90 MTDENYRRTQATVRFH 105 (208)
T ss_dssp EECSSCEEEEEEEEEE
T ss_pred EEcccCceeEEEEEEE
Confidence 9999765444444433
No 312
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.93 E-value=5e-09 Score=75.55 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=52.9
Q ss_pred CeEEEeeEeccC----CCEEEEEcc---------------CCeEeec----ccCceEEe------eCCcEEEcCCCCCCC
Q psy5697 60 RGLELTRQTRYE----PSQLGWRFS---------------NNTVIAY----VKDLRIAL------SNGSLMFPPFPETGF 110 (145)
Q Consensus 60 g~~L~C~a~G~P----~P~i~W~~~---------------dg~~i~~----~~~~~~~~------~~GsL~i~~~~~~~~ 110 (145)
.+.|.|.+.|.| .|.|+|++. +|..+.. ..+..... .+++|.|.++..+
T Consensus 17 ~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~-- 94 (214)
T 3jz7_A 17 TAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLS-- 94 (214)
T ss_dssp CEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCGG--
T ss_pred CEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCChh--
Confidence 399999999988 579999863 3333321 11222222 2468999988765
Q ss_pred CCCCCCeEEEEEEEcCCCce-EEEEEEEEeccCC
Q psy5697 111 RPDVHSTVYRCRASNEAGVI-LSRFVHVKADSRI 143 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~~~~~~ 143 (145)
|+|.|+|.|.|..|.. .+..+.|...+.+
T Consensus 95 ----D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 124 (214)
T 3jz7_A 95 ----DIGTYQCKVKKAPGVANKKFLLTVLVKPSG 124 (214)
T ss_dssp ----GCEEEEEEEEETTEEEEEEEEEEEECCCBS
T ss_pred ----hCeEEEEEEEeCCCccccEEEEEEEcCCCC
Confidence 8999999999999976 4445666544433
No 313
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.93 E-value=2.1e-09 Score=77.68 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=49.8
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeec-----------ccCceEE-eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAY-----------VKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~-----------~~~~~~~-~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.++|.|.+.+ |.|.|+|++ ++..+.. .++.... ..+|+|.|.+++.+ |+|.|+|.|.|..
T Consensus 12 ~VtL~c~~~~-~~~~i~W~~-~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~------DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 12 NVTFHVPSNV-PLKEVLWKK-QKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSS------DEDEYEMESPNIT 83 (171)
T ss_dssp CEEECCCCSS-CCSCEEEEE-TTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGG------GCEEEEEECTTCC
T ss_pred CEEEcCCCCC-CcceEEEEe-CCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChh------hCceEEEEEeCCC
Confidence 3999999955 999999986 4443321 1111122 36789999988765 8999999999999
Q ss_pred CceEEEEEEEEec
Q psy5697 128 GVILSRFVHVKAD 140 (145)
Q Consensus 128 G~~~s~~v~v~~~ 140 (145)
| .....+.|...
T Consensus 84 ~-~~~~~L~V~~~ 95 (171)
T 1ccz_A 84 D-TMKFFLYVLEM 95 (171)
T ss_dssp S-CEEEEEEEECC
T ss_pred C-cEEEEEEEECc
Confidence 9 33335555543
No 314
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.92 E-value=6.1e-09 Score=80.02 Aligned_cols=69 Identities=9% Similarity=0.004 Sum_probs=45.9
Q ss_pred eEEEee-EeccCCCEEEEEccCCeEeecccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEE
Q psy5697 61 GLELTR-QTRYEPSQLGWRFSNNTVIAYVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 61 ~~L~C~-a~G~P~P~i~W~~~dg~~i~~~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v 135 (145)
+.|.|. +.|+|.|+|+|+ +||..+...... ......+.|.|.++... |.|.|+|.|+|..|.. .+..+
T Consensus 132 ~~l~C~~~~g~P~~~i~W~-~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~------d~g~Y~C~a~n~~~~~~~~~~~ 204 (308)
T 4fom_A 132 VAAICIAATGKPVAHIDWE-GDLGEMESTTTSFPNETATIISQYKLFPTRFA------RGRRITCVVKHPALEKDIRYSF 204 (308)
T ss_dssp EEEEEEEEEEBSCCEEEEC-CCSSBCCEEEEECTTSCEEEEEEEEECCCGGG------TTCEEEEEEECTTCSSCEEEEE
T ss_pred EEEEEEecCCcCCceEEEE-ECCcccccccceeeeecccccccceEEeeeec------CCccEEEEEEccCCCCceEEeE
Confidence 899997 579999999997 466665421100 01111235788766543 8999999999998875 44444
Q ss_pred E
Q psy5697 136 H 136 (145)
Q Consensus 136 ~ 136 (145)
.
T Consensus 205 ~ 205 (308)
T 4fom_A 205 I 205 (308)
T ss_dssp E
T ss_pred E
Confidence 3
No 315
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.91 E-value=2.1e-09 Score=76.99 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=48.8
Q ss_pred CeEEEee-EeccCC-CEEEEEccCCeEeec--ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTR-QTRYEP-SQLGWRFSNNTVIAY--VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~-a~G~P~-P~i~W~~~dg~~i~~--~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|. +.|.|. |.|+|++ ++..+.. .........+++|.|.++..+ |+|.|+|.|.|..|..
T Consensus 25 ~v~L~C~~~~~~p~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 25 GMVLLCDPPYHFPDDLSYRWLL-NEFPVFITMDKRRFVSQTNGNLYIANVEAS------DKGNYSCFVSSPSITK 92 (201)
T ss_dssp CEEECCCCCSEESSCCEEEEEE-SSTTCBCCCSSSEEECTTTCCEEESSCCGG------GCEEEEEEEEEGGGTE
T ss_pred CEEEeccccccCCCceEEEEEE-CCceeeeeeCCCeEEEcCCCeEEECcCCcc------cCeEEEEEEEecCCCc
Confidence 3999999 999999 9999985 5555431 122223345779999988765 8999999999987765
No 316
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.91 E-value=3.1e-09 Score=79.62 Aligned_cols=66 Identities=15% Similarity=0.128 Sum_probs=45.2
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---ee--------cccCceEEee-C--CcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IA--------YVKDLRIALS-N--GSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~--------~~~~~~~~~~-~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.++|.|.+.|.|.|.|.|++.+ +.. +. ..++...... + .+|.|.++..+ |+|.|.|.|.
T Consensus 21 ~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~ 94 (250)
T 3esu_F 21 RVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE------DIGTYFCQQG 94 (250)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEC
T ss_pred cEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh------hCEEEEEEEe
Confidence 3999999999999999998743 111 10 0111111111 2 27999988765 8999999999
Q ss_pred cCCCceE
Q psy5697 125 NEAGVIL 131 (145)
Q Consensus 125 N~~G~~~ 131 (145)
|..|...
T Consensus 95 n~~~~~~ 101 (250)
T 3esu_F 95 NTLPWTF 101 (250)
T ss_dssp SSSSCEE
T ss_pred eCCCceE
Confidence 9977653
No 317
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.90 E-value=4e-09 Score=73.87 Aligned_cols=73 Identities=10% Similarity=0.099 Sum_probs=48.0
Q ss_pred EEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeE---eecccCceEEeeCC---cEEEcCCCCCCCCCCCCCe
Q psy5697 48 FRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTV---IAYVKDLRIALSNG---SLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 48 ~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G 117 (145)
.+++.|.. .. +..+.|.|.+.|. +.+.|++.+ |+. +...++......++ +|.|.++..+ |+|
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~------DsG 90 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYE------DNG 90 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGG------GCE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChH------HCE
Confidence 45566655 22 2339999999998 999999753 322 11112222222233 5999988765 899
Q ss_pred EEEEEEEcCCC
Q psy5697 118 VYRCRASNEAG 128 (145)
Q Consensus 118 ~Y~C~A~N~~G 128 (145)
.|.|.|.|..|
T Consensus 91 ~Y~C~a~n~~g 101 (133)
T 3khq_A 91 IYFCKQKCDSA 101 (133)
T ss_dssp EEEEEESSCC-
T ss_pred EEEEEEEeCCC
Confidence 99999999987
No 318
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.90 E-value=3e-09 Score=79.10 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=48.2
Q ss_pred CeEEEeeEeccC----CCEEEEEccC-CeE---eec--------ccCceEEe-eCC--cEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYE----PSQLGWRFSN-NTV---IAY--------VKDLRIAL-SNG--SLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P----~P~i~W~~~d-g~~---i~~--------~~~~~~~~-~~G--sL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|.+.|.| .|.|.|++.+ |.. +.. .+...... .++ +|.|.++..+ |+|.|+
T Consensus 18 ~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~ 91 (240)
T 1moe_A 18 RATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEAD------DVATYY 91 (240)
T ss_dssp CEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEE
T ss_pred CEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChh------hCEEEE
Confidence 399999999999 8999998743 221 110 01111221 222 7999988765 899999
Q ss_pred EEEEcCCCceE--EEEEEEE
Q psy5697 121 CRASNEAGVIL--SRFVHVK 138 (145)
Q Consensus 121 C~A~N~~G~~~--s~~v~v~ 138 (145)
|.|.|..|... ...+.|.
T Consensus 92 C~~~n~~~~~~~~~~~l~V~ 111 (240)
T 1moe_A 92 CQQTNEDPYTFGGGTKLEIK 111 (240)
T ss_dssp EEECSSSSCCBCCCEEEEEC
T ss_pred EEEccCCceeecCCEEEEEe
Confidence 99999977643 2344544
No 319
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.90 E-value=1.1e-09 Score=78.15 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=50.8
Q ss_pred CCCEEEEcCCC-CCcc--CeEEEeeEeccCCC-EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 45 HYPFRIKSAPG-GNRT--RGLELTRQTRYEPS-QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P-~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+|.+...|.. .... .+.|.|.+.|.|.| .|+|++ ||..+.. .+++|.|.++..+ |+|.|+
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~~--------~~~~L~i~~v~~~------d~G~Y~ 67 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSEE--------TNSSLNIVNAKFE------DSGEYK 67 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEE-TTEECSC--------CSSEEEECSCCGG------GCEEEE
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEE-CCeECCC--------CceEEEEecccee------cCEEEE
Confidence 35667777766 2233 39999999999987 699974 7766532 3568999888665 899999
Q ss_pred EEEEcCCCce
Q psy5697 121 CRASNEAGVI 130 (145)
Q Consensus 121 C~A~N~~G~~ 130 (145)
|.|.|..++.
T Consensus 68 C~~~~~~~s~ 77 (176)
T 1f2q_A 68 CQHQQVNESE 77 (176)
T ss_dssp EECTTSSCCC
T ss_pred EEcCCccccc
Confidence 9999987754
No 320
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.90 E-value=4.5e-09 Score=80.60 Aligned_cols=79 Identities=13% Similarity=0.179 Sum_probs=52.3
Q ss_pred CCEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccC-Ce---Eeec--------ccCceEEeeCC---cEEEcCCCC
Q psy5697 46 YPFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSN-NT---VIAY--------VKDLRIALSNG---SLMFPPFPE 107 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~d-g~---~i~~--------~~~~~~~~~~G---sL~i~~~~~ 107 (145)
.+.+.+.|.+ .+.. .++|.|.+.|.|.|.|.|++.+ +. .+.. .+.......++ +|.|.++..
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 3456666665 2333 3999999999999999998743 21 1211 11122222222 899998876
Q ss_pred CCCCCCCCCeEEEEEEEcCCCce
Q psy5697 108 TGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+ |+|.|+|.|.|..|..
T Consensus 92 ~------DsG~Y~C~~~n~~~~~ 108 (276)
T 3auv_A 92 E------DFATYYCQQHYTTPPT 108 (276)
T ss_dssp G------GCEEEEEEECSSSSCC
T ss_pred h------hCEEEEEEEecCCccc
Confidence 5 8999999999987653
No 321
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.89 E-value=3e-09 Score=77.61 Aligned_cols=63 Identities=10% Similarity=0.153 Sum_probs=44.5
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEee---c--------ccCceE---EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVIA---Y--------VKDLRI---ALSNGSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i~---~--------~~~~~~---~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.+.|.|.+.|.|.|.|+|++.+ |.... . ..+... ...+++|.|.++..+ |+|.|+|.|.
T Consensus 17 ~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~ 90 (213)
T 3mj8_L 17 KATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG------DEADYYCQSW 90 (213)
T ss_dssp CEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEE
T ss_pred CEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh------hCEEEEEEec
Confidence 3999999999999999998732 22111 0 111111 122347999988765 8999999999
Q ss_pred cCCC
Q psy5697 125 NEAG 128 (145)
Q Consensus 125 N~~G 128 (145)
|..|
T Consensus 91 ~~~~ 94 (213)
T 3mj8_L 91 DGTN 94 (213)
T ss_dssp ETTT
T ss_pred cCCc
Confidence 9998
No 322
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.89 E-value=5.5e-09 Score=69.46 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=46.6
Q ss_pred CeEEEeeE-eccCCCE----EEEEccCCeE-ee----------cccCceEEee--------CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQ-TRYEPSQ----LGWRFSNNTV-IA----------YVKDLRIALS--------NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a-~G~P~P~----i~W~~~dg~~-i~----------~~~~~~~~~~--------~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+ .+.|.+. |.|++.+... +. ...+...... +++|.|.+++.+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~------D 90 (118)
T 3udw_C 17 SVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVE------D 90 (118)
T ss_dssp CEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGG------G
T ss_pred cEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChH------H
Confidence 39999999 6666554 9998752111 10 0011122222 568999988766 8
Q ss_pred CeEEEEEEEc-CCCce-EEEEEEEEe
Q psy5697 116 STVYRCRASN-EAGVI-LSRFVHVKA 139 (145)
Q Consensus 116 ~G~Y~C~A~N-~~G~~-~s~~v~v~~ 139 (145)
+|.|.|.+.| ..|.. ....+.|.+
T Consensus 91 ~G~Y~C~v~~~~~~~~~~~~~L~V~~ 116 (118)
T 3udw_C 91 EGNYTCLFVTFPQGSRSVDIWLRVLA 116 (118)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CeEEEEEEEECCCCCccceEEEEEEe
Confidence 9999999999 67754 333455543
No 323
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.89 E-value=1.6e-08 Score=74.74 Aligned_cols=64 Identities=13% Similarity=0.036 Sum_probs=43.9
Q ss_pred eEEEeeEeccCCC---EEEEEccCC----------eEeeccc-----CceEEe------eCCcEEEcCCCCCCCCCCCCC
Q psy5697 61 GLELTRQTRYEPS---QLGWRFSNN----------TVIAYVK-----DLRIAL------SNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 61 ~~L~C~a~G~P~P---~i~W~~~dg----------~~i~~~~-----~~~~~~------~~GsL~i~~~~~~~~~~~~d~ 116 (145)
+.|.|.+.|.|.| .|+|+|.+. ..+.... ...... .+++|.|.++..+ |+
T Consensus 22 v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~------D~ 95 (226)
T 4f80_A 22 ADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS------DS 95 (226)
T ss_dssp EEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG------GC
T ss_pred EEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH------HC
Confidence 9999999998876 799986432 2211110 011111 1237999988765 89
Q ss_pred eEEEEEEEcCCCce
Q psy5697 117 TVYRCRASNEAGVI 130 (145)
Q Consensus 117 G~Y~C~A~N~~G~~ 130 (145)
|.|+|.|.|..|..
T Consensus 96 G~Y~C~a~n~~~~~ 109 (226)
T 4f80_A 96 GKYLCYFQDGDFYE 109 (226)
T ss_dssp EEEEEEEEETTEEE
T ss_pred eeEEEEEECCCcEE
Confidence 99999999998876
No 324
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.89 E-value=4.8e-09 Score=78.82 Aligned_cols=76 Identities=12% Similarity=-0.006 Sum_probs=49.3
Q ss_pred EEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeE---eec--------ccCceEE-eeC--CcEEEcCCCCCCC
Q psy5697 49 RIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTV---IAY--------VKDLRIA-LSN--GSLMFPPFPETGF 110 (145)
Q Consensus 49 ~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~--------~~~~~~~-~~~--GsL~i~~~~~~~~ 110 (145)
+.+.|.+ .+ +..++|.|.+.|.|.|.|.|++.+ |.. +.. ..+.... ..+ ++|.|.++..+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~-- 81 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE-- 81 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG--
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH--
Confidence 4455554 22 233999999999999999998743 221 110 1111122 122 37999988765
Q ss_pred CCCCCCeEEEEEEEcCCCce
Q psy5697 111 RPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|.|.|.|..+..
T Consensus 82 ----D~G~Y~C~~~n~~~~~ 97 (242)
T 2znx_A 82 ----DFGMYFCQQSNSXPYT 97 (242)
T ss_dssp ----GCEEEEEEECSSSSCE
T ss_pred ----HCEEEEEeEecCCceE
Confidence 8999999999986643
No 325
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.89 E-value=5.7e-09 Score=77.93 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=58.5
Q ss_pred eecCceeEeeccccCcccCCceeeeEEE-eccCCCCCCCEEEE-cCCCCC--ccCeEEEeeEecc-CCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVY-SSRSENEHYPFRIK-SAPGGN--RTRGLELTRQTRY-EPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~P~~i~-~p~~~~--~~g~~L~C~a~G~-P~P-~i~W~~~dg~ 83 (145)
..|+++|.|........ .+|..+. ........+|.+.. .|.... +..+.|.|.+.|. |.| +|+|+ +||.
T Consensus 88 ~~D~G~Y~C~~~~~~~~----~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~-~~g~ 162 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFP----YWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWN-SGSL 162 (227)
T ss_dssp GGGCEEEEEEEEETTEE----EECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEG-GGTB
T ss_pred cccCEEEEEEECCCCce----EEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEe-cCCC
Confidence 57888888877543211 1111110 00111234565544 343322 2338999999996 877 99996 4666
Q ss_pred Eeec--ccCce---EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VIAY--VKDLR---IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i~~--~~~~~---~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.. .+... .....++|.|.+...+ | |.|+|.|+|..+..
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------~-g~Y~C~a~n~~~~~ 207 (227)
T 1mju_H 163 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWP------S-QSITCNVAHPASST 207 (227)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECTTTTT------T-SCCEEEEEEGGGTE
T ss_pred cCCcEECCceecCCeEEEEEEEEEchhhcC------C-CeEEEEEEECCCCc
Confidence 5321 11110 1112336777654322 5 99999999987653
No 326
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.88 E-value=3.3e-09 Score=78.72 Aligned_cols=64 Identities=8% Similarity=-0.002 Sum_probs=45.2
Q ss_pred CeEEEeeEec---cCCCEEEEEccCCeEe-----------------------------ecccCceEEee--CCcEEEcCC
Q psy5697 60 RGLELTRQTR---YEPSQLGWRFSNNTVI-----------------------------AYVKDLRIALS--NGSLMFPPF 105 (145)
Q Consensus 60 g~~L~C~a~G---~P~P~i~W~~~dg~~i-----------------------------~~~~~~~~~~~--~GsL~i~~~ 105 (145)
.+.|.|.+.| .|.|.|+|++. +... ....+...... +++|.|.++
T Consensus 19 ~v~L~C~~~~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v 97 (250)
T 2fbo_J 19 TVELPCSYQLANDTQPPVISWLKG-ASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLTHV 97 (250)
T ss_dssp CEEECCEEEECSCCSCCEEEEEEE-EETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEEECSC
T ss_pred eEEEEEEeEcCCCCCceEEEEEeC-CCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEEEeeC
Confidence 3999999998 99999999864 3221 00111112222 358999988
Q ss_pred CCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 106 PETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 106 ~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
..+ |+|.|+|.|.|..|..
T Consensus 98 ~~~------D~G~Y~C~~~~~~~~~ 116 (250)
T 2fbo_J 98 HPQ------DGGRYWCQVAQWSIRT 116 (250)
T ss_dssp CGG------GCEEEEEEEECTTCCS
T ss_pred Chh------hCeEEEEEeccCccCC
Confidence 765 8999999999998854
No 327
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.88 E-value=1.9e-09 Score=80.65 Aligned_cols=110 Identities=14% Similarity=0.104 Sum_probs=61.7
Q ss_pred eecCceeEeeccccCcccCCceeee---EEEeccCCCCCCCEEE-EcCCCC-C--ccCeEEEeeEeccCCC--EEEEEcc
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGN---IVYSSRSENEHYPFRI-KSAPGG-N--RTRGLELTRQTRYEPS--QLGWRFS 80 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~P~~i-~~p~~~-~--~~g~~L~C~a~G~P~P--~i~W~~~ 80 (145)
..|+++|.|......... ...++. ..+........+|.+. ..|... . +..+.|.|.+.|.|+| +|+|++
T Consensus 86 ~~D~G~Y~C~~~~~~~~~-~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k- 163 (246)
T 4dzb_B 86 PEDSSFYICSARTSGDFG-EQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV- 163 (246)
T ss_dssp GGGCEEEEEEECCSSGGG-CCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-
T ss_pred HHHCEEEEEEEecCCCCc-ceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE-
Confidence 678889998875421100 001111 1111111123456544 444431 2 2338999999998876 999975
Q ss_pred CCeEeecccCceEEe---------eCCc------EEEcCCCCCCCCCCCC-CeEEEEEEEcCCCc
Q psy5697 81 NNTVIAYVKDLRIAL---------SNGS------LMFPPFPETGFRPDVH-STVYRCRASNEAGV 129 (145)
Q Consensus 81 dg~~i~~~~~~~~~~---------~~Gs------L~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G~ 129 (145)
||..+.... .... .+|+ |.|.+...+ | .|.|+|.|+|....
T Consensus 164 ~g~~l~~~~--~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~------d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 164 NGKEVHSGV--CTDPQPLKEQPALNDSRYALSSRLRVSATFWQ------NPRNHFRCQVQFYGLS 220 (246)
T ss_dssp TTEEECTTE--EECSSCEESSTTSTTCCEEEEEEEEEEHHHHT------CTTCEEEEEEEECCBC
T ss_pred CCEECCCCc--ccccccccccccCCCCCEEEEEEEEECHHHhc------cCCCeEEEEEEecCCC
Confidence 888875321 1110 2454 556543222 4 89999999998654
No 328
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.88 E-value=1.1e-08 Score=78.30 Aligned_cols=61 Identities=16% Similarity=0.180 Sum_probs=41.6
Q ss_pred CeEEEeeEeccCC--CEEEEEccC-CeE---eec-------------ccCceEEe-----eCCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEP--SQLGWRFSN-NTV---IAY-------------VKDLRIAL-----SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P~--P~i~W~~~d-g~~---i~~-------------~~~~~~~~-----~~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|.|. |.|.|++.+ |.. +.. ..+..... ..++|.|.++..+ |
T Consensus 155 ~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D 228 (264)
T 2gjj_A 155 SVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSE------D 228 (264)
T ss_dssp CEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred cEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcc------c
Confidence 3999999999985 899998753 321 210 01111111 1237999888765 8
Q ss_pred CeEEEEEEEcC
Q psy5697 116 STVYRCRASNE 126 (145)
Q Consensus 116 ~G~Y~C~A~N~ 126 (145)
+|.|.|.|.|.
T Consensus 229 sG~Y~C~a~n~ 239 (264)
T 2gjj_A 229 SADYYCVRSGN 239 (264)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEecC
Confidence 99999999996
No 329
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.88 E-value=1.6e-08 Score=78.07 Aligned_cols=106 Identities=12% Similarity=0.119 Sum_probs=61.4
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CCcc-C-eEEEeeE-eccCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GNRT-R-GLELTRQ-TRYEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~~~-g-~~L~C~a-~G~P~P~i~W~~~dg~~i 85 (145)
..|++.|.|-.... +. +... .........+|.+...+.. .... + +.+.|.+ .|+|.|+|+|++ |+..+
T Consensus 88 ~~D~G~Y~C~v~~~-~~--~~~~----~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~-~~~~~ 159 (313)
T 4fqp_A 88 VEDEGNYTCLFVTF-PQ--GSRS----VDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHS-DLGGM 159 (313)
T ss_dssp GGGCEEEEEEEECS-SS--CEEE----EEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEE-TTCCE
T ss_pred hhhCEEEEEEEeec-cC--ccee----eeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeec-CCccc
Confidence 67788888854221 11 1111 1112233456766655554 2222 2 7889986 589999999985 66555
Q ss_pred ecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 86 AYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 86 ~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.... ......+| .|.|.+... .|.|.|+|.|+|..|..
T Consensus 160 ~~~~-~~~~~~~~~~~~~s~l~i~~~~~------~d~g~Y~C~a~n~~~~~ 203 (313)
T 4fqp_A 160 PNTS-QVPGFLSGTVTVTSLWILVPSSQ------VDGKNVTCKVEHESFEK 203 (313)
T ss_dssp EEEE-EEECSSTTCEEEEEEEEECCCGG------GTTCEEEEEEECTTSSS
T ss_pred cccc-eeeeecccccccceeeeeccccc------ccCeeEEEEEEccCcCc
Confidence 4221 11222333 366665443 28999999999998765
No 330
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.87 E-value=7.5e-09 Score=70.94 Aligned_cols=75 Identities=15% Similarity=0.072 Sum_probs=47.5
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---ee-c-------ccCceEE-ee--CCcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IA-Y-------VKDLRIA-LS--NGSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~-~-------~~~~~~~-~~--~GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.++|.|.+.|.|.+.|.|++.+ |.. +- . .++.... .. +.+|.|.++..+ |+|.|.|.+.
T Consensus 18 ~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~ 91 (120)
T 1mqk_L 18 TVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPE------DFGSYYCQHH 91 (120)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEC
T ss_pred cEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHH------HCEEEEEEEE
Confidence 3999999999999999999753 321 11 0 1111121 12 237999988765 8999999999
Q ss_pred cCC-Cce--EEEEEEEEec
Q psy5697 125 NEA-GVI--LSRFVHVKAD 140 (145)
Q Consensus 125 N~~-G~~--~s~~v~v~~~ 140 (145)
|.. ... ....+.|...
T Consensus 92 ~~~~~~~fg~gt~L~V~~~ 110 (120)
T 1mqk_L 92 YGTPPLTFGGGTKLEIKRE 110 (120)
T ss_dssp SSSSSCCBCCCEEEEEC--
T ss_pred eCCCceEECCCeEEEEecC
Confidence 864 222 2345555543
No 331
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.87 E-value=5.1e-09 Score=77.88 Aligned_cols=111 Identities=14% Similarity=0.102 Sum_probs=59.5
Q ss_pred eecCceeEeeccccCccc--CC-ceeeeE--EEeccCCCCCCCEEE-EcCCCCCccC--eEEEeeEecc-CCC-EEEEEc
Q psy5697 10 LADADTYIIADRSLFPRP--LG-YLVGNI--VYSSRSENEHYPFRI-KSAPGGNRTR--GLELTRQTRY-EPS-QLGWRF 79 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~--~~-~~~~~~--~~~~~~~~~~~P~~i-~~p~~~~~~g--~~L~C~a~G~-P~P-~i~W~~ 79 (145)
..|+++|.|......... .. ..+|.. +... .....+|.+. ..|......| +.|.|.+.|. |.| +|+|+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~-~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~- 165 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVS-PASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN- 165 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEE-SCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECC-
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecc-cCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEe-
Confidence 578889988875532100 00 011111 1111 1122456544 4444333233 8999999997 877 99997
Q ss_pred cCCeEeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 80 SNNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 80 ~dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+||..+...........+| +|.|.+.... | |.|+|.|+|..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSN 214 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTT------C-CCCCEEEEEGGGT
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcC------C-CcEEEEEEcCCCC
Confidence 4665432100011112333 4777655322 6 9999999998764
No 332
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.87 E-value=9.3e-09 Score=79.72 Aligned_cols=87 Identities=14% Similarity=0.105 Sum_probs=52.5
Q ss_pred CCEEEEcCCC-CCcc--CeEEEeeEeccCCC------EEEEEccC-CeE---eecc--------cCceEE-eeC--CcEE
Q psy5697 46 YPFRIKSAPG-GNRT--RGLELTRQTRYEPS------QLGWRFSN-NTV---IAYV--------KDLRIA-LSN--GSLM 101 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~--g~~L~C~a~G~P~P------~i~W~~~d-g~~---i~~~--------~~~~~~-~~~--GsL~ 101 (145)
+|.+.+.|.. .... .+.|.|.+.|.|.| .|.|++.+ |.. +... ...... ... ++|.
T Consensus 159 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 238 (291)
T 2gki_A 159 DLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLT 238 (291)
T ss_dssp CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cceEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEE
Confidence 3445555544 2223 39999999999987 99999753 321 1100 111111 122 3799
Q ss_pred EcCCCCCCCCCCCCCeEEEEEEEcCCCceE--EEEEEEE
Q psy5697 102 FPPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHVK 138 (145)
Q Consensus 102 i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~--s~~v~v~ 138 (145)
|.++..+ |+|.|.|.|.|...... ...+.|+
T Consensus 239 I~~v~~~------DsG~Y~C~a~~~~~~~fg~gt~l~v~ 271 (291)
T 2gki_A 239 ISSVQAE------DLAVYYCKQSYYHMYTFGSGTKLEIK 271 (291)
T ss_dssp ESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ECCCCHH------HCEEEEEEEccCCceEEcCCEEEEEE
Confidence 9988765 89999999999644332 2344444
No 333
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.87 E-value=2.4e-09 Score=81.79 Aligned_cols=69 Identities=12% Similarity=0.196 Sum_probs=49.6
Q ss_pred eEEEeeE-eccCCCEEEEEccCCeEeecccCceEEeeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy5697 61 GLELTRQ-TRYEPSQLGWRFSNNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVH 136 (145)
Q Consensus 61 ~~L~C~a-~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~ 136 (145)
+.|.|.. .|.|.|.|+|+ +||..+....+......+ .+|.|.++..+ |+|.|+|.|.|..|...+..+.
T Consensus 19 v~l~~~~~~~~p~~~v~W~-k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~~~n~~g~~~s~~l~ 90 (312)
T 2y23_A 19 ISLNFECDKMTPKSEFSWS-KDYVSTEDSPRLEVESKGNKTKMTFKDLGMD------DLGIYSCDVTDTDGIASSYLID 90 (312)
T ss_dssp EEEEEECSSCCTTCCEEEE-ETTEECTTCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEESSSCCCCEEEEEC
T ss_pred EEEEEEEeCCCCCcEEEEE-ECCEECCCCCCEEEEEeCCEEEEEECcCCcc------CCEEEEEEEEeCCCcEEEEEEE
Confidence 5555554 68999999998 588887654433333333 38999888665 8999999999999976554443
No 334
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.87 E-value=1.2e-08 Score=75.12 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=63.7
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCC-C--ccCeEEEeeEecc-CC-CEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGG-N--RTRGLELTRQTRY-EP-SQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~-~--~~g~~L~C~a~G~-P~-P~i~W~~~dg~~ 84 (145)
..|++.|.|...+..... ...+ ..........+|.+...+... . +..+.|.|.+.|. |+ ++|+|+ +||..
T Consensus 77 ~~D~G~Y~C~a~~~~~~~--~~~~--~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~-k~g~~ 151 (207)
T 2vol_A 77 WLNGKEFKCRVNSAAFPA--PIEK--TISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWE-SNGQP 151 (207)
T ss_dssp HHTTCCEEEEEECTTCSS--CEEE--EECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEE-ETTEE
T ss_pred cCCCCEEEEEEEccCCCC--ceEE--EeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEE-ECCEe
Confidence 458888988875532221 1111 111112445678776555442 1 2238999999995 54 399997 48887
Q ss_pred eecccCc-eEEeeCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 85 IAYVKDL-RIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 85 i~~~~~~-~~~~~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+...... .....+|++.+.. +... ...|.|.|+|.|+|....
T Consensus 152 l~~~~~~~~~~~~~g~~~~~s~l~i~~~---~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 152 AENYKNTQPIMDTDGSYFVYSKLNVQKS---NWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp CSCEEECCCEECTTSCEEEEEEEEEEHH---HHSSCCEEEEEEECTTSG
T ss_pred ccCcccCCceECCCCCEEEEEEEEECHH---HcCCCCEEEEEEECCCCC
Confidence 6532111 1234566554421 1111 112689999999999653
No 335
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.86 E-value=4.5e-09 Score=76.76 Aligned_cols=63 Identities=10% Similarity=0.125 Sum_probs=43.5
Q ss_pred CeEEEeeEecc-CCCEEEEEccC-CeE---ee-c-----------ccCceEE-ee--CCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 60 RGLELTRQTRY-EPSQLGWRFSN-NTV---IA-Y-----------VKDLRIA-LS--NGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 60 g~~L~C~a~G~-P~P~i~W~~~d-g~~---i~-~-----------~~~~~~~-~~--~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
.+.|.|.+.|. |.|.|+|++.+ |.. +. . .++.... .. +++|.|.++..+ |+|.|
T Consensus 17 ~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y 90 (218)
T 3s96_B 17 SAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPE------DEAIY 90 (218)
T ss_dssp CEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGG------GCEEE
T ss_pred cEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcc------cCEEE
Confidence 39999999999 99999998732 111 10 0 0011111 12 236999988765 89999
Q ss_pred EEEEEcCCC
Q psy5697 120 RCRASNEAG 128 (145)
Q Consensus 120 ~C~A~N~~G 128 (145)
+|.|.|..|
T Consensus 91 ~C~~~~~~~ 99 (218)
T 3s96_B 91 ICGVGDTIK 99 (218)
T ss_dssp EEEEEEEET
T ss_pred EEEEecCCC
Confidence 999999987
No 336
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.86 E-value=1.2e-08 Score=74.89 Aligned_cols=63 Identities=10% Similarity=0.086 Sum_probs=44.2
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|.| .|.|.|++.+ |..+. ...+...... +++|.|.++..+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D 90 (219)
T 1c1e_H 17 TVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNE------D 90 (219)
T ss_dssp CEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGG------G
T ss_pred cEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcc------c
Confidence 399999999986 7999998753 43321 0111122221 348999988765 8
Q ss_pred CeEEEEEEEcCCC
Q psy5697 116 STVYRCRASNEAG 128 (145)
Q Consensus 116 ~G~Y~C~A~N~~G 128 (145)
+|.|+|.|.|..|
T Consensus 91 ~G~Y~C~~~~~~~ 103 (219)
T 1c1e_H 91 MATYFCARGTTIV 103 (219)
T ss_dssp CEEEEEEEEETTT
T ss_pred CEEEEEEEeccCc
Confidence 9999999999874
No 337
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.86 E-value=7.4e-09 Score=77.88 Aligned_cols=74 Identities=14% Similarity=0.222 Sum_probs=50.4
Q ss_pred CeEEEeeEe---ccCCCEEEEEccCCeE----e--e----------cccCceEE-----eeCCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQT---RYEPSQLGWRFSNNTV----I--A----------YVKDLRIA-----LSNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~---G~P~P~i~W~~~dg~~----i--~----------~~~~~~~~-----~~~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+. |.|.|.|+|++.++.. + . ...+.... ..+++|.|.++..+ |
T Consensus 22 ~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D 95 (268)
T 3mj6_A 22 SVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKA------D 95 (268)
T ss_dssp CEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGG------G
T ss_pred cEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHh------H
Confidence 399999998 8999999998743311 0 0 00111121 12378999988765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+|.|+|.|.|..+.. .+..+.|..
T Consensus 96 ~G~Y~C~~~~~~~~~~~~~~~~l~V 120 (268)
T 3mj6_A 96 EGIYTCEIRLKNESMVMKKPVELWV 120 (268)
T ss_dssp CEEEEEEEEETTCCCEEEEEEEEEE
T ss_pred CEEEEEEEEecCCcceEEEEEEEEE
Confidence 999999999987765 555666654
No 338
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.85 E-value=1.5e-08 Score=67.66 Aligned_cols=71 Identities=17% Similarity=0.111 Sum_probs=48.6
Q ss_pred eEEEeeE-eccCCCEEEEEccCCeEeec-------------ccCceEEe-eCCcEEEcCCCCCCCCCCCCCeEEEEEEEc
Q psy5697 61 GLELTRQ-TRYEPSQLGWRFSNNTVIAY-------------VKDLRIAL-SNGSLMFPPFPETGFRPDVHSTVYRCRASN 125 (145)
Q Consensus 61 ~~L~C~a-~G~P~P~i~W~~~dg~~i~~-------------~~~~~~~~-~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N 125 (145)
++|.|.. .+.+.+.+.|++.+|+.+.. .++..... .+++|.|.+++.+ |+|.|.|.+.|
T Consensus 21 v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~------DsG~Y~C~v~~ 94 (110)
T 2ptt_A 21 VTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKE------DKGTYYMRVLR 94 (110)
T ss_dssp EEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGG------GCEEEEEEEES
T ss_pred EEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcc------cCeEEEEEEEc
Confidence 9999998 88899999999855543210 11111222 4679999998766 89999999998
Q ss_pred CCCceEEEEEEE
Q psy5697 126 EAGVILSRFVHV 137 (145)
Q Consensus 126 ~~G~~~s~~v~v 137 (145)
.........+.|
T Consensus 95 ~~~~~~~~~L~V 106 (110)
T 2ptt_A 95 ETENELKITLEV 106 (110)
T ss_dssp SSBCCEEEEEEE
T ss_pred CCCcEEEEEEEE
Confidence 764333333443
No 339
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.85 E-value=4.6e-09 Score=76.72 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=47.3
Q ss_pred CeEEEeeEec-cCCCEEEEEccCCeEeec--------------cc---CceEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 60 RGLELTRQTR-YEPSQLGWRFSNNTVIAY--------------VK---DLRIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 60 g~~L~C~a~G-~P~P~i~W~~~dg~~i~~--------------~~---~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+.|.|.+.+ .|.+.|+|++ +|..+.. .+ +...+..+++|.|.+++.+ |+|.|+|
T Consensus 15 ~v~L~C~~~~~~~~~~v~W~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~------D~G~Y~C 87 (193)
T 2if7_A 15 SVTLPLEFPAGEKVNFITWLF-NETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKME------DTGSYRA 87 (193)
T ss_dssp CEEECCCCCCCSCCCEEEEEE-TTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGG------GCEEEEE
T ss_pred eEEEeccCCCcccccEEEEEE-CCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcc------cCceEEE
Confidence 3999999976 5668999985 5654420 00 1223345789999998765 8999999
Q ss_pred EEEcCCCce
Q psy5697 122 RASNEAGVI 130 (145)
Q Consensus 122 ~A~N~~G~~ 130 (145)
.|.|..|..
T Consensus 88 ~~~~~~~~~ 96 (193)
T 2if7_A 88 QISTKTSAK 96 (193)
T ss_dssp EEECSSCEE
T ss_pred EEEecCCCe
Confidence 999999875
No 340
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.85 E-value=1.6e-08 Score=69.18 Aligned_cols=71 Identities=15% Similarity=0.112 Sum_probs=52.9
Q ss_pred CeEEEeeEec-cCCCEEEEEccCC---eEeecccCceEEeeCC-----cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTR-YEPSQLGWRFSNN---TVIAYVKDLRIALSNG-----SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G-~P~P~i~W~~~dg---~~i~~~~~~~~~~~~G-----sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
...|+|.+.| .+.|+++|-|.+| .+++... ..-...| .|.|.++-.+ |+|.|+|.|.+..|.+
T Consensus 28 ~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~--q~w~E~~N~s~fvLhf~~V~~s------DsGsYRCsAn~~sg~i 99 (120)
T 2aw2_A 28 PFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQ--TSWKEEKNISFFILHFEPVLPN------DNGSYRCSANFQSNLI 99 (120)
T ss_dssp CEEEEEEEECSSSCCEEEEEEECSSCEEECCSSC--EEEEECSSCEEEEEEESSCCGG------GCEEEEEEEEETTEEE
T ss_pred eEEEEccEEeccCCCceEEEecCCceEEECcccc--ccceecCCeeEEEEEEeeeeEc------CCcceEEEeeCCCCcE
Confidence 3899999999 7999999998887 4444321 1112233 4777777665 8999999999999999
Q ss_pred EEEEEEEE
Q psy5697 131 LSRFVHVK 138 (145)
Q Consensus 131 ~s~~v~v~ 138 (145)
.|..+++.
T Consensus 100 eSHsvtI~ 107 (120)
T 2aw2_A 100 ESHSTTLY 107 (120)
T ss_dssp ECCCEEEE
T ss_pred EeeEEEEE
Confidence 87766655
No 341
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.85 E-value=7.3e-09 Score=78.02 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=50.5
Q ss_pred CEEEEcCCC-CC--ccCeEEEeeEeccC-----CCEEEEEccC-CeEe---e--------cccCceEEeeCC---cEEEc
Q psy5697 47 PFRIKSAPG-GN--RTRGLELTRQTRYE-----PSQLGWRFSN-NTVI---A--------YVKDLRIALSNG---SLMFP 103 (145)
Q Consensus 47 P~~i~~p~~-~~--~~g~~L~C~a~G~P-----~P~i~W~~~d-g~~i---~--------~~~~~~~~~~~G---sL~i~ 103 (145)
+.+.+.|.. .. +..+.|.|.+.|.| .|.|+|++.+ |..+ . ..++......++ +|.|.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 445554554 22 23399999999998 7999998743 2211 0 011122222222 89999
Q ss_pred CCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 104 PFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 104 ~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
++..+ |+|.|+|.|.|..+..
T Consensus 115 ~v~~~------D~G~Y~C~~~~~~~~~ 135 (252)
T 3bkj_L 115 RVEAE------DLGVYYCFQASLVPLT 135 (252)
T ss_dssp SCCGG------GCEEEEEEECSBSSCE
T ss_pred CCCcc------cCEEEEEEEEcCCccE
Confidence 88765 8999999999997754
No 342
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.85 E-value=1.3e-08 Score=82.79 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=49.2
Q ss_pred CCCEEEEcCCC-CCcc--CeEEEeeEecc-CC-CEEEEEccCCeEeecccCceEEeeCC------cEEEcCCCCCCCCCC
Q psy5697 45 HYPFRIKSAPG-GNRT--RGLELTRQTRY-EP-SQLGWRFSNNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPD 113 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~--g~~L~C~a~G~-P~-P~i~W~~~dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~ 113 (145)
.+|.+...++. .... .+.|.|.+.|. |. |.|+|+ +||..+...........+| +|.|.++..+
T Consensus 131 ~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~-k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~----- 204 (457)
T 1hzh_H 131 KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG----- 204 (457)
T ss_dssp BCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEET-TTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGG-----
T ss_pred CCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEE-eCCEeccceEcCceECCCCCEEEEEEEEecccccC-----
Confidence 46665544433 2223 38999999998 64 899996 5775432111111122334 6888766433
Q ss_pred CCCeEEEEEEEcCCCce
Q psy5697 114 VHSTVYRCRASNEAGVI 130 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~G~~ 130 (145)
| |.|+|.|+|..|..
T Consensus 205 -d-G~Y~C~a~n~~~~~ 219 (457)
T 1hzh_H 205 -T-QTYICNVNHKPSNT 219 (457)
T ss_dssp -T-SCCEEEEEEGGGTE
T ss_pred -C-ceEEEEEEeCCCCc
Confidence 7 99999999998874
No 343
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.84 E-value=5.8e-09 Score=80.62 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=45.1
Q ss_pred eEEEee-EeccCCCEEEEEcc-CCeEeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-E
Q psy5697 61 GLELTR-QTRYEPSQLGWRFS-NNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-L 131 (145)
Q Consensus 61 ~~L~C~-a~G~P~P~i~W~~~-dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~ 131 (145)
+.|.|. +.|.|.|+|+|++. ++.... ......+| .|.|.++..+ |+|.|+|.|+|..|.. .
T Consensus 153 ~~l~C~~~~~~p~~~i~W~~~~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~~ 222 (331)
T 3u83_A 153 LVATCTSANGKPPSVVSWETRLKGEAEY----QEIRNPNGTVTVISRYRLVPSREA------HQQSLACIVNYHMDRFKE 222 (331)
T ss_dssp EEEEEEEEEEBSCCEEEEEESSCCEEEE----EEEECTTSCEEEEEEEEECCCGGG------TTCEEEEEEEETTEEEEE
T ss_pred EEEEEEecCCcCCceEEEEcCCCCcccc----ceeECCCCcEEEEEEEEEEecccc------CCCEEEEEEecCCCccee
Confidence 899998 99999999999863 232211 11122233 4666655443 8999999999999985 3
Q ss_pred EEEEEEE
Q psy5697 132 SRFVHVK 138 (145)
Q Consensus 132 s~~v~v~ 138 (145)
+..+.|.
T Consensus 223 ~~~l~V~ 229 (331)
T 3u83_A 223 SLTLNVQ 229 (331)
T ss_dssp EEECCEE
T ss_pred eEEEEEe
Confidence 3344443
No 344
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.84 E-value=4.6e-09 Score=80.12 Aligned_cols=86 Identities=9% Similarity=0.019 Sum_probs=57.0
Q ss_pred CCCCEEEEcCCCCCc--cCeEEEeeEeccCCCEEEEEccCCeEeecc-cCceEEeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 44 EHYPFRIKSAPGGNR--TRGLELTRQTRYEPSQLGWRFSNNTVIAYV-KDLRIALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 44 ~~~P~~i~~p~~~~~--~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~-~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
..+|.|...|...+. ..++|.|.+.+ +.+.+.|+| ||..+... ........+++|.|.++..+ |+|.|+
T Consensus 5 ~~kP~i~~~P~~~v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~ 76 (242)
T 1p6f_A 5 LPKPFIWAEPHFMVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFAVDRPKPPERINKVKFYIPDMNSR------MAGQYS 76 (242)
T ss_dssp CCCCEEEEESCSEEETTCCEEEEEECCT-TCCEEEEEE-TTEEEEEECCSSCTTCCEEEEEECSCCGG------GCEEEE
T ss_pred CCCCEEEeeCCCccCCCCcEEEEEeeCC-CCcEEEEEE-CCCccccccccccCCcceeEEEecCCCcc------cCeEEE
Confidence 346888888776333 33999999987 568999984 77765421 11111123568999888765 899999
Q ss_pred EEEEcCCCce-EEEEEEE
Q psy5697 121 CRASNEAGVI-LSRFVHV 137 (145)
Q Consensus 121 C~A~N~~G~~-~s~~v~v 137 (145)
|.+.|..|.. .|..+.|
T Consensus 77 C~~~~~~~~s~~S~~~~L 94 (242)
T 1p6f_A 77 CIYRVGELWSEPSNLLDL 94 (242)
T ss_dssp EEEEETTEECCCCCCEEE
T ss_pred EEEecCCccccCCcceEE
Confidence 9999986643 3443333
No 345
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.83 E-value=3.9e-08 Score=68.11 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=47.1
Q ss_pred CeEEEeeEeccCC---CEEEEEccCC-eEee--------------cccCceEEee------CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEP---SQLGWRFSNN-TVIA--------------YVKDLRIALS------NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P~---P~i~W~~~dg-~~i~--------------~~~~~~~~~~------~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.+.+. +.|.|++.+. ..+. ...+...... +.+|.|.+++.+ |
T Consensus 23 ~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~------D 96 (139)
T 1pko_A 23 EAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFS------D 96 (139)
T ss_dssp CEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGG------G
T ss_pred CEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHH------H
Confidence 3999999988664 7999987542 1111 0011122222 237999988766 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+|.|+|.+.|..|.. ....+.|.
T Consensus 97 ~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 97 EGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEEEcCCCceEEEEEEEEe
Confidence 999999999999865 23355554
No 346
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.83 E-value=8.2e-09 Score=76.95 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=60.9
Q ss_pred eecCceeEeeccccCcccCCceeee---EEEeccCCCCCCCEEE-EcCCC-CC--ccCeEEEeeEec-cCCC-EEEEEcc
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGN---IVYSSRSENEHYPFRI-KSAPG-GN--RTRGLELTRQTR-YEPS-QLGWRFS 80 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~P~~i-~~p~~-~~--~~g~~L~C~a~G-~P~P-~i~W~~~ 80 (145)
..|+++|.|........ ...++. ..+........+|.+. ..|.. .. +..+.|.|.+.| .|+| +|+|+ +
T Consensus 84 ~~D~G~Y~C~~~~~~~~--~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~-~ 160 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGD--EQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWW-V 160 (240)
T ss_dssp GGGCEEEEEEEESSTTB--CCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE-E
T ss_pred hhHCEEEEEEEccCCCc--ceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEE-E
Confidence 67888998887521000 001111 1111111223556554 44443 11 223899999999 6667 79997 4
Q ss_pred CCeEeecccCc---eEEeeCCc------EEEcCCCCCCCCCCCC-CeEEEEEEEcCCC
Q psy5697 81 NNTVIAYVKDL---RIALSNGS------LMFPPFPETGFRPDVH-STVYRCRASNEAG 128 (145)
Q Consensus 81 dg~~i~~~~~~---~~~~~~Gs------L~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G 128 (145)
||+.+...... .....+|+ |.|.+...+ | .|.|+|.|+|...
T Consensus 161 ~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 161 NGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWH------NPRNHFRCQVQFHGL 212 (240)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHS------CTTCEEEEEEEECCB
T ss_pred CCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhc------cCCCEEEEEEEcCCC
Confidence 88887532110 12233554 666654332 4 6799999999865
No 347
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.83 E-value=8.1e-09 Score=72.72 Aligned_cols=70 Identities=11% Similarity=0.046 Sum_probs=50.6
Q ss_pred CCEEEEcCCC-CCccC--eEEEeeEeccC-CCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 46 YPFRIKSAPG-GNRTR--GLELTRQTRYE-PSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~g--~~L~C~a~G~P-~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
+|.+...|.. ....| +.|.|.+.|.| .+.++|++ ||..+... .+.+.|.++..+ |+|.|+|
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~~--------~~~~~~~~~~~~------d~G~Y~C 68 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPTH--------TQPSYRFKANNN------DSGEYTC 68 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEE-TTEECTTC--------CSSEEEEECCGG------GCEEEEE
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEE-CCeEcccC--------ccceEEEecccc------cCeEEEE
Confidence 4667777765 22333 89999999998 68999985 88776432 345666666544 8999999
Q ss_pred EEEcCCCce
Q psy5697 122 RASNEAGVI 130 (145)
Q Consensus 122 ~A~N~~G~~ 130 (145)
.|.|..++.
T Consensus 69 ~~~~~~~s~ 77 (170)
T 3ry4_A 69 QTGQTSLSD 77 (170)
T ss_dssp EETTSBCCC
T ss_pred EEeCCCceE
Confidence 999876654
No 348
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.83 E-value=9.5e-09 Score=76.93 Aligned_cols=65 Identities=12% Similarity=0.140 Sum_probs=44.6
Q ss_pred CeEEEeeEeccC-----CCEEEEEccC-CeEe---ec---------ccCceEEeeCC--cEEEcCCCCCCCCCCCCCeEE
Q psy5697 60 RGLELTRQTRYE-----PSQLGWRFSN-NTVI---AY---------VKDLRIALSNG--SLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 60 g~~L~C~a~G~P-----~P~i~W~~~d-g~~i---~~---------~~~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y 119 (145)
.++|.|.+.|.| .|.|.|++.+ |..+ .. ..+......++ +|.|.++..+ |+|.|
T Consensus 18 ~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y 91 (247)
T 1svz_A 18 QASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE------DLGIY 91 (247)
T ss_dssp CEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEE
T ss_pred CEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHH------HCEEE
Confidence 399999999999 7999998743 2211 10 11111122222 7999988765 89999
Q ss_pred EEEEEcCCCce
Q psy5697 120 RCRASNEAGVI 130 (145)
Q Consensus 120 ~C~A~N~~G~~ 130 (145)
.|.|.|..+..
T Consensus 92 ~C~~~n~~~~~ 102 (247)
T 1svz_A 92 YCFQGSHFPPT 102 (247)
T ss_dssp EEEECSSSSCE
T ss_pred EEEEccCCccE
Confidence 99999997653
No 349
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.82 E-value=1.1e-08 Score=77.48 Aligned_cols=62 Identities=10% Similarity=0.083 Sum_probs=43.2
Q ss_pred eEEEeeEeccC--CCEEEEEccC-CeE---eec------------ccCceEEee---C--CcEEEcCCCCCCCCCCCCCe
Q psy5697 61 GLELTRQTRYE--PSQLGWRFSN-NTV---IAY------------VKDLRIALS---N--GSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 61 ~~L~C~a~G~P--~P~i~W~~~d-g~~---i~~------------~~~~~~~~~---~--GsL~i~~~~~~~~~~~~d~G 117 (145)
++|.|.+.|.| .|.|.|++.+ |.. +.. ..+...... + ++|.|.++..+ |+|
T Consensus 18 v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------DsG 91 (257)
T 1f3r_B 18 LSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD------DTG 91 (257)
T ss_dssp EEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT------CCE
T ss_pred EEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc------cCE
Confidence 99999999996 7999998742 221 100 111222221 2 38999988766 899
Q ss_pred EEEEEEEcCCC
Q psy5697 118 VYRCRASNEAG 128 (145)
Q Consensus 118 ~Y~C~A~N~~G 128 (145)
.|.|.|.|..|
T Consensus 92 ~Y~C~a~n~~g 102 (257)
T 1f3r_B 92 TYYCTRDLYGG 102 (257)
T ss_dssp EEEEEEESSSS
T ss_pred EEEEEEccccc
Confidence 99999999976
No 350
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.82 E-value=1.2e-08 Score=77.76 Aligned_cols=72 Identities=10% Similarity=0.087 Sum_probs=46.0
Q ss_pred EEEcCCC-CCcc--CeEEEeeEeccCC--CEEEEEccC-CeEee------------------cccCceEEee-----CCc
Q psy5697 49 RIKSAPG-GNRT--RGLELTRQTRYEP--SQLGWRFSN-NTVIA------------------YVKDLRIALS-----NGS 99 (145)
Q Consensus 49 ~i~~p~~-~~~~--g~~L~C~a~G~P~--P~i~W~~~d-g~~i~------------------~~~~~~~~~~-----~Gs 99 (145)
++..|.. .... .+.|.|.+.|.|+ |.|.|++.+ |..+. ..++...... .++
T Consensus 154 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 233 (268)
T 1x9q_A 154 KLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVY 233 (268)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred EEECCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEE
Confidence 4455544 2233 3999999999875 899998642 33221 0111112211 247
Q ss_pred EEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 100 LMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 100 L~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
|.|.++..+ |+|.|.|.|.|.
T Consensus 234 L~I~~v~~~------DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 234 LQMNNLRVE------DTGIYYCTGASY 254 (268)
T ss_dssp EEECSCCGG------GCEEEEEEEEET
T ss_pred EEECCCCHH------HCEEEEEEEccC
Confidence 999988765 899999999985
No 351
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.82 E-value=2.8e-08 Score=75.30 Aligned_cols=116 Identities=14% Similarity=0.123 Sum_probs=63.7
Q ss_pred eceee-eecCceeEeeccccC-cccCCceeeeEEEe-ccCCCCCCCEEEEcCCC-CCccC--eEEEeeEec-cCCC-EEE
Q psy5697 5 HISTL-LADADTYIIADRSLF-PRPLGYLVGNIVYS-SRSENEHYPFRIKSAPG-GNRTR--GLELTRQTR-YEPS-QLG 76 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~-~~~~~~~~P~~i~~p~~-~~~~g--~~L~C~a~G-~P~P-~i~ 76 (145)
+|+.+ ..|.++|.|...... +.. ..+|..+.- .......+|.+...++. ....| +.|.|.+.| +|.| +|+
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~--~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 159 (253)
T 3liz_H 82 QMSSLKSEDTAMYYCTRDPAGRAWF--AYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 159 (253)
T ss_dssp EECSCCGGGCEEEEEEECCBTTTBC--CEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEE
T ss_pred EECCCChhhCEEEEEEEecCCccee--eEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEE
Confidence 34444 678899999875532 100 122221111 11133456766644433 22223 899999998 8877 999
Q ss_pred EEccCCeEeec--ccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 77 WRFSNNTVIAY--VKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 77 W~~~dg~~i~~--~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
|+ +||..+.. .+.. ......++|.|.+.... | |.|+|.|+|..+..
T Consensus 160 W~-~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d-g~ytC~v~~~~~~~ 210 (253)
T 3liz_H 160 WN-SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWP------S-ETVTCNVAHPASST 210 (253)
T ss_dssp EG-GGTBCTTEEECCCEEETTEEEEEEEEEEETTSTT------T-SCCEEEEEEGGGTE
T ss_pred EE-eCCeecceEeCCccccCCeEEEEEEEEEcHHHCC------C-ceEEEEEEECCCCc
Confidence 96 46653210 0000 01112256777665432 7 99999999999865
No 352
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.82 E-value=1e-08 Score=68.66 Aligned_cols=61 Identities=13% Similarity=0.189 Sum_probs=42.2
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---eec--------ccCceEE-eeC--CcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IAY--------VKDLRIA-LSN--GSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~--------~~~~~~~-~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.++|.|.+.|.|.+.|.|++.+ |.. +.. .++.... ... .+|.|.++..+ |+|.|.|.+.
T Consensus 20 ~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~ 93 (109)
T 2q20_A 20 RVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPE------DIATYYCQQY 93 (109)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEC
T ss_pred cEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChh------hCEEEEEEEe
Confidence 3999999999999999999754 221 110 1111121 222 37999988765 8999999999
Q ss_pred cC
Q psy5697 125 NE 126 (145)
Q Consensus 125 N~ 126 (145)
|.
T Consensus 94 ~~ 95 (109)
T 2q20_A 94 DN 95 (109)
T ss_dssp SS
T ss_pred eC
Confidence 86
No 353
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.82 E-value=2.4e-08 Score=80.78 Aligned_cols=109 Identities=14% Similarity=0.104 Sum_probs=60.2
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEE-EEcCCCCCccC--eEEEeeEecc-CCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFR-IKSAPGGNRTR--GLELTRQTRY-EPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~-i~~p~~~~~~g--~~L~C~a~G~-P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+.......... +. .......+|.+ ...|......| +.|.|.+.|. |.| +|+|+ +||..
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~---l~-V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~-k~~~~ 161 (434)
T 1igy_B 87 SDDSAVYYCVREGEVPYWGQGTT---VT-VSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN-SGSLS 161 (434)
T ss_dssp GGGCSEECCCCSSSSCCCCCCEE---CE-ECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEET-TTTBC
T ss_pred hHHCEEEEEEEEccccccCCceE---EE-EccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEe-eCCcC
Confidence 66888888887652111000000 10 01112234544 44444333333 8999999997 777 99996 56654
Q ss_pred eec--ccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 85 IAY--VKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 85 i~~--~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+.. .+.. ......++|.|.++..+ | |.|+|.|+|..|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d-g~Y~C~a~n~~~~~ 205 (434)
T 1igy_B 162 SGVHTFPAVLQSDLYTLSSSVTVPSSPRP------S-ETVTCNVAHPASST 205 (434)
T ss_dssp SSEEECCCEECSSCEEEEEEEEEETTTTT------S-SCCEEEEECTTTTC
T ss_pred CCeEecCceecCCcEEEEEEEEEcchhcC------C-CcEEEEEEeCCCCc
Confidence 211 1100 00111245788665432 7 99999999999985
No 354
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.82 E-value=9.7e-09 Score=75.00 Aligned_cols=73 Identities=19% Similarity=0.156 Sum_probs=47.0
Q ss_pred eEEEeeEeccCCC-----EEEEEccCCeEeec--------------ccCceEEee------CCcEEEcCCCCCCCCCCCC
Q psy5697 61 GLELTRQTRYEPS-----QLGWRFSNNTVIAY--------------VKDLRIALS------NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 61 ~~L~C~a~G~P~P-----~i~W~~~dg~~i~~--------------~~~~~~~~~------~GsL~i~~~~~~~~~~~~d 115 (145)
+.|.|.+.|.|.+ .|+|++. +..+.. ..+...... +.+|.|.++..+ |
T Consensus 19 v~L~C~~~~~p~~~~~~~~v~W~~~-~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~------D 91 (222)
T 3sbw_C 19 MTIECKFPVEKQLDLAALIVYWEME-DKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ------D 91 (222)
T ss_dssp EEEEEECCCCSSCCTTTCEEEEEET-TEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG------G
T ss_pred EEEEeEecCCCCCCCccEEEEEEEC-CcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc------c
Confidence 9999999998844 9999864 322210 011222222 238999988765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEecc
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKADS 141 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~~~ 141 (145)
+|.|+|.|.| .|.. ....+.|.+..
T Consensus 92 ~G~Y~C~~~~-~~~~~~~~~l~V~~~~ 117 (222)
T 3sbw_C 92 AGVYRCMISY-GGADYKRITVKVNAPY 117 (222)
T ss_dssp CEEEEEEEES-SSEEEEEEEEEEEBCC
T ss_pred CeEEEEEEEe-CCCceeEEEEEEECCC
Confidence 9999999999 5544 33345555443
No 355
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.81 E-value=4.1e-09 Score=78.26 Aligned_cols=80 Identities=14% Similarity=0.111 Sum_probs=50.9
Q ss_pred CCCCEEEEcCCC-C--CccC--eEEEeeEecc---CC-CEEEEEccCCeEeecccC-ce------EEeeCCcEEEcCCCC
Q psy5697 44 EHYPFRIKSAPG-G--NRTR--GLELTRQTRY---EP-SQLGWRFSNNTVIAYVKD-LR------IALSNGSLMFPPFPE 107 (145)
Q Consensus 44 ~~~P~~i~~p~~-~--~~~g--~~L~C~a~G~---P~-P~i~W~~~dg~~i~~~~~-~~------~~~~~GsL~i~~~~~ 107 (145)
..+|.+...|++ . ...| +.|.|.+.|. |+ |.|+|++ +|..+..... .. .....++|.|.++..
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~ 85 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFV-NNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW 85 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEE-TTEEECCCEEEEEEETTTTEEEEEEEEECCHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEE-CCccccCcccccccccCCCeEEEEEEEEEcHHHc
Confidence 445655555555 2 3333 9999999998 44 8999985 6665532110 00 111234688877655
Q ss_pred CCCCCCCCCeEEEEEEEcCCCce
Q psy5697 108 TGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+ |+|.|+|.|.|..|..
T Consensus 86 ~------D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 86 M------SGKEFKCKVNNKDLPS 102 (218)
T ss_dssp H------TTCCEEEEEEETTCSS
T ss_pred C------CCCeEEEEEECCcCCC
Confidence 4 8999999999998864
No 356
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.81 E-value=1.5e-09 Score=80.42 Aligned_cols=79 Identities=8% Similarity=-0.054 Sum_probs=45.0
Q ss_pred CCEEEEcCCC-CCccC--eEEEeeEeccCCCEEEEEccC-CeEe---e--------cccCceEE---eeCCcEEEcCCCC
Q psy5697 46 YPFRIKSAPG-GNRTR--GLELTRQTRYEPSQLGWRFSN-NTVI---A--------YVKDLRIA---LSNGSLMFPPFPE 107 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~g--~~L~C~a~G~P~P~i~W~~~d-g~~i---~--------~~~~~~~~---~~~GsL~i~~~~~ 107 (145)
.+.+.+.|.. ....| +.|.|.+.|.|.|.|+|++.+ |..+ . ..+..... ..+.+|.|.++..
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 3455565655 23333 899999999999999998643 2221 0 00111111 1122799988876
Q ss_pred CCCCCCCCCeEEEEEEEcCCCce
Q psy5697 108 TGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+ |+|.|+|.|.|..|..
T Consensus 103 ~------D~G~Y~C~~~~~~~~~ 119 (233)
T 3bqu_C 103 E------DVADYYCLQSDNLPYT 119 (233)
T ss_dssp C------CCSEEEEEECSSSSCC
T ss_pred H------HCEEEEEEEecCCcee
Confidence 5 8999999999987754
No 357
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.81 E-value=2.7e-08 Score=74.03 Aligned_cols=78 Identities=15% Similarity=0.074 Sum_probs=46.3
Q ss_pred CCCEEEEcCCC-CCccC--eEEEeeEecc-CCC-EEEEEccCCeEeecccCceEE-----eeCCcEEEcCCCCCCCCCCC
Q psy5697 45 HYPFRIKSAPG-GNRTR--GLELTRQTRY-EPS-QLGWRFSNNTVIAYVKDLRIA-----LSNGSLMFPPFPETGFRPDV 114 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~g--~~L~C~a~G~-P~P-~i~W~~~dg~~i~~~~~~~~~-----~~~GsL~i~~~~~~~~~~~~ 114 (145)
.+|.+...++. ....| +.|.|.+.|. |.| +|+|++ +|..+......... ...++|.|.+...
T Consensus 129 ~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~------- 200 (228)
T 3bae_H 129 TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS-GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW------- 200 (228)
T ss_dssp BCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGG-GTCCTTEEEEEEEEETTEEEEEEEEEEETTTT-------
T ss_pred CCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEee-CCcccCceEcCceeCCCcEEEEEEEEEEhhhc-------
Confidence 46765544433 22233 8999999997 888 999964 66543110000111 1123577765432
Q ss_pred CCeEEEEEEEcCCCce
Q psy5697 115 HSTVYRCRASNEAGVI 130 (145)
Q Consensus 115 d~G~Y~C~A~N~~G~~ 130 (145)
|.|.|+|.|+|..|..
T Consensus 201 d~g~YtC~~~n~~~~~ 216 (228)
T 3bae_H 201 PSESITCNVAHPASST 216 (228)
T ss_dssp TTSCCEEEEEEGGGTE
T ss_pred CCCcEEEEEEECCCCC
Confidence 3499999999999875
No 358
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.81 E-value=5.2e-09 Score=79.17 Aligned_cols=76 Identities=11% Similarity=0.073 Sum_probs=40.1
Q ss_pred CEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeE---ee-cc------------c-CceEE----eeCCcEE
Q psy5697 47 PFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTV---IA-YV------------K-DLRIA----LSNGSLM 101 (145)
Q Consensus 47 P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~-~~------------~-~~~~~----~~~GsL~ 101 (145)
|.+.+.|.+ .+ +..++|.|.+.|.|.|.|.|++.+ +.. +. .. + +.... ..+.+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 444455554 22 233999999999999999998732 111 11 00 0 11111 1234799
Q ss_pred EcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 102 FPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 102 i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
|.++..+ |+|.|.|.|.|..|
T Consensus 83 I~~v~~~------DsG~Y~C~~~~~~~ 103 (259)
T 3omz_A 83 LRNLIEN------DSGVYYCATWDQNY 103 (259)
T ss_dssp ESSCCGG------GCEEEEEEEECTTS
T ss_pred ECCCCcc------cCEEEEEEEeeCCc
Confidence 9988766 89999999999987
No 359
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.81 E-value=1.8e-08 Score=75.25 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=43.2
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .|.|.|++.+ |.... ...+...... .++|.|.++..+ |
T Consensus 19 ~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D 92 (247)
T 2ghw_B 19 SLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE------D 92 (247)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred cEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH------H
Confidence 399999999998 6899998742 22110 0111222222 137999988765 8
Q ss_pred CeEEEEEEEcCCCc
Q psy5697 116 STVYRCRASNEAGV 129 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~ 129 (145)
+|.|+|.|.|..+.
T Consensus 93 ~G~Y~C~~~n~~~~ 106 (247)
T 2ghw_B 93 TAVYYCARDRSYYL 106 (247)
T ss_dssp CEEEEEEEEETTEE
T ss_pred CEEEEEeeeccCCc
Confidence 99999999998443
No 360
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.80 E-value=1.9e-08 Score=74.59 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=63.6
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-CC--ccCeEEEeeEec-cCCC-EEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-GN--RTRGLELTRQTR-YEPS-QLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~~--~~g~~L~C~a~G-~P~P-~i~W~~~dg~~ 84 (145)
..|++.|.|...+..... ...+ ..........+|.+...++. .. +..+.|.|.+.| +|+| +|+|+ +||..
T Consensus 85 ~~D~g~Y~C~~~~~~~~~--~~~~--~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~-k~g~~ 159 (218)
T 2rgs_A 85 WMSGKEFKCKVNNKDLPS--PIER--TISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWT-SNGHT 159 (218)
T ss_dssp HHTTCCEEEEEEETTCSS--CEEE--EECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEE-ETTEE
T ss_pred cCCCCeEEEEEECCcCCC--cceE--EEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEE-ECCEe
Confidence 457788888775431111 1121 11111244567877655544 21 223899999999 6776 99997 58887
Q ss_pred eecccCc-eEEeeCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 85 IAYVKDL-RIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 85 i~~~~~~-~~~~~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+...... .....+|++.+.. +... ...|.|.|+|.|+|....
T Consensus 160 ~~~~~~~~~~~~~~gt~~~~s~l~v~~~---~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 160 EENYKDTAPVLDSDGSYFIYSKLNMKTS---KWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp ECCEEECCCEECTTSCEEEEEEEEEEHH---HHHHCSCEEEEEECTTSG
T ss_pred ccCceecccEECCCCCEEEEEEEEECHH---HcCCCCeEEEEEEcCCCC
Confidence 6432111 1234566655432 1111 011489999999999765
No 361
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.80 E-value=2.8e-08 Score=66.28 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=47.7
Q ss_pred CeEEEeeEeccCC----CEEEEEccCC------eEee-------------cccCceEEeeC------CcEEEcCCCCCCC
Q psy5697 60 RGLELTRQTRYEP----SQLGWRFSNN------TVIA-------------YVKDLRIALSN------GSLMFPPFPETGF 110 (145)
Q Consensus 60 g~~L~C~a~G~P~----P~i~W~~~dg------~~i~-------------~~~~~~~~~~~------GsL~i~~~~~~~~ 110 (145)
.+.|.|.+.+.|. +.|.|++.+. ..+. ...+......+ ++|.|.++..+
T Consensus 22 ~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~-- 99 (126)
T 1eaj_A 22 TAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLS-- 99 (126)
T ss_dssp CEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECSCCGG--
T ss_pred CEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECcCChH--
Confidence 3999999998775 4599986431 2221 01122233333 68999988766
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 111 RPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
|+|.|.|.+.|..|.. ...++|.
T Consensus 100 ----D~G~Y~C~v~~~~~~~-~~~~~L~ 122 (126)
T 1eaj_A 100 ----DIGTYQCKVKKAPGVA-NKKIHLV 122 (126)
T ss_dssp ----GCEEEEEEEEETTEEE-EEEEEEE
T ss_pred ----HCeEEEEEEEcCCccC-CcEEEEE
Confidence 8999999999998864 3444444
No 362
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.79 E-value=1.1e-08 Score=74.77 Aligned_cols=62 Identities=10% Similarity=0.009 Sum_probs=42.2
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee---------------cccCceEEee---C--CcEEEcCCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA---------------YVKDLRIALS---N--GSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~---------------~~~~~~~~~~---~--GsL~i~~~~~~~~~~~~d~ 116 (145)
.+.|.|.+.|.| .|.|+|++.+ |.... ...+...... . .+|.|.++..+ |+
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D~ 90 (210)
T 3d9a_H 17 TLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE------DT 90 (210)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG------GC
T ss_pred cEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcc------cC
Confidence 399999999986 4999998643 32211 0112222221 1 28999988765 89
Q ss_pred eEEEEEEEcCC
Q psy5697 117 TVYRCRASNEA 127 (145)
Q Consensus 117 G~Y~C~A~N~~ 127 (145)
|.|+|.|.|..
T Consensus 91 G~Y~C~~~~~~ 101 (210)
T 3d9a_H 91 ATYYCANWDGD 101 (210)
T ss_dssp EEEEEEETTSS
T ss_pred EEEEEEEecCc
Confidence 99999999974
No 363
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.79 E-value=1.7e-08 Score=76.06 Aligned_cols=67 Identities=9% Similarity=0.124 Sum_probs=44.7
Q ss_pred CeEEEeeEeccC--CCEEEEEcc-CCeEee----------------cccCceEEeeCC-----cEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFS-NNTVIA----------------YVKDLRIALSNG-----SLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~-dg~~i~----------------~~~~~~~~~~~G-----sL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.+ .|.|.|++. ++..+. ..++......++ +|.|.++..+ |
T Consensus 18 ~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D 91 (253)
T 3uzq_A 18 SVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSG------D 91 (253)
T ss_dssp CEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred cEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcc------c
Confidence 399999999965 889999873 232211 011112222222 4999988765 8
Q ss_pred CeEEEEEEEcCCCceEE
Q psy5697 116 STVYRCRASNEAGVILS 132 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s 132 (145)
+|.|+|.|.|..+...+
T Consensus 92 sG~Y~C~~~~~~~~~~~ 108 (253)
T 3uzq_A 92 TAVYYCSRGWEGFAYWG 108 (253)
T ss_dssp CEEEEEEECSSSCCEEC
T ss_pred CEEEEEEEeeCCccEEC
Confidence 99999999998776543
No 364
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.79 E-value=4e-09 Score=77.63 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=48.8
Q ss_pred EEEEcCCC-C-Ccc--CeEEEeeEeccC----CCEEEEEccCCeEeeccc-Cce------EEeeCCcEEEcCCCCCCCCC
Q psy5697 48 FRIKSAPG-G-NRT--RGLELTRQTRYE----PSQLGWRFSNNTVIAYVK-DLR------IALSNGSLMFPPFPETGFRP 112 (145)
Q Consensus 48 ~~i~~p~~-~-~~~--g~~L~C~a~G~P----~P~i~W~~~dg~~i~~~~-~~~------~~~~~GsL~i~~~~~~~~~~ 112 (145)
+++..|.. . ... .+.|.|.+.|.| .+.|+|++ ++..+.... ... .....++|.|.++..+
T Consensus 4 v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~---- 78 (207)
T 2vol_A 4 VFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFV-DDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWL---- 78 (207)
T ss_dssp EEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEEECCCEEECCCEETTTEEEEEEEEECCHHHHH----
T ss_pred EEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEE-CCccccccccCCCcCcCCCcEEEEEEEEEehhHcC----
Confidence 55555553 2 233 399999999995 24999986 555543110 000 1112346888776554
Q ss_pred CCCCeEEEEEEEcCCCce
Q psy5697 113 DVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|.|..|..
T Consensus 79 --D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 79 --NGKEFKCRVNSAAFPA 94 (207)
T ss_dssp --TTCCEEEEEECTTCSS
T ss_pred --CCCEEEEEEEccCCCC
Confidence 8999999999999864
No 365
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.78 E-value=5.8e-08 Score=66.13 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=49.8
Q ss_pred CeEEEeeEec--cCCCEEEEEccCCeEeec------------ccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEE-
Q psy5697 60 RGLELTRQTR--YEPSQLGWRFSNNTVIAY------------VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRAS- 124 (145)
Q Consensus 60 g~~L~C~a~G--~P~P~i~W~~~dg~~i~~------------~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~- 124 (145)
.++|.|...+ .+.+.|.|++.+ ..+.. .++......+++|.|.+++.+ |+|.|+|.+.
T Consensus 20 ~v~L~C~~~~~~~~~~~v~W~k~~-~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~------D~G~Y~C~v~~ 92 (117)
T 3q0h_A 20 SIILQCHLSSTTAQVTQVNWEQQD-QLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVN------DTGEYFCIYHT 92 (117)
T ss_dssp CEEECEEEESCCCEEEEEEEEETT-EEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGG------GCEEEEEEEEE
T ss_pred CEEEEEEecCCCCCEEEEEEEeCC-EEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChh------hCEEEEEEEEE
Confidence 3999999988 445689998743 33221 122223345679999998766 8999999865
Q ss_pred cCCCce-EEEEEEEEeccC
Q psy5697 125 NEAGVI-LSRFVHVKADSR 142 (145)
Q Consensus 125 N~~G~~-~s~~v~v~~~~~ 142 (145)
|..|.. ....+.|.+++.
T Consensus 93 ~~~g~~~~~~~L~V~~pp~ 111 (117)
T 3q0h_A 93 YPDGTYTGRIFLEVLESSV 111 (117)
T ss_dssp ETTCCEEEEEEEEEECC--
T ss_pred CCCCCeEEEEEEEEEccCc
Confidence 566776 344666665543
No 366
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.78 E-value=1.7e-08 Score=67.39 Aligned_cols=62 Identities=8% Similarity=0.002 Sum_probs=42.7
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---eec--------ccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IAY--------VKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~~--------~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.++|.|.+.|.|.+.|.|++.+ |.. +.. .++.... ..++ +|.|.++..+ |+|.|.|.+.
T Consensus 18 ~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~ 91 (107)
T 1i8k_A 18 KVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSE------DVGDYYCLQS 91 (107)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEEC
T ss_pred CEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHH------HCEEEEEEEe
Confidence 3999999999999999998753 221 210 1111122 2223 7999988765 8999999999
Q ss_pred cCC
Q psy5697 125 NEA 127 (145)
Q Consensus 125 N~~ 127 (145)
|..
T Consensus 92 ~~~ 94 (107)
T 1i8k_A 92 FNV 94 (107)
T ss_dssp SSS
T ss_pred eCC
Confidence 863
No 367
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.77 E-value=6.6e-08 Score=79.29 Aligned_cols=85 Identities=8% Similarity=0.006 Sum_probs=49.0
Q ss_pred CCCEEEEcCCC-C-CccCeEEEeeEecc-CC-C-EEEEEccCCeEeecccCceEE-eeCC------cEEEcCCCCCCCCC
Q psy5697 45 HYPFRIKSAPG-G-NRTRGLELTRQTRY-EP-S-QLGWRFSNNTVIAYVKDLRIA-LSNG------SLMFPPFPETGFRP 112 (145)
Q Consensus 45 ~~P~~i~~p~~-~-~~~g~~L~C~a~G~-P~-P-~i~W~~~dg~~i~~~~~~~~~-~~~G------sL~i~~~~~~~~~~ 112 (145)
.+|.+...+.. . .+..+.|.|.+.|. |. | +|+|+ ++|............ ..+| .|.|.+...+
T Consensus 126 ~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~-~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~---- 200 (475)
T 1iga_A 126 TSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWS-ESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCL---- 200 (475)
T ss_pred cCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEEEc-CCCcccceEeCCceecCCCCcEEEEEEEEechhHcC----
Confidence 35655444332 2 22238999999998 65 5 99997 465432110000011 1233 4666544322
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEE
Q psy5697 113 DVHSTVYRCRASNEAGVILSRFVH 136 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~~s~~v~ 136 (145)
|+|.|+|.|+|..|...+..+.
T Consensus 201 --d~g~Y~C~a~n~~~~~~~~~v~ 222 (475)
T 1iga_A 201 --AGKSVTCHVKHYTNPSQDVTVP 222 (475)
T ss_pred --CCceEEEEEEECCCCceeeeEe
Confidence 7999999999999865444444
No 368
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.77 E-value=7.9e-09 Score=74.80 Aligned_cols=64 Identities=11% Similarity=0.182 Sum_probs=46.7
Q ss_pred eEEEeeEe----ccCCCEEEEEccCCeEeec-----------ccCceE--EeeCCcEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 61 GLELTRQT----RYEPSQLGWRFSNNTVIAY-----------VKDLRI--ALSNGSLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 61 ~~L~C~a~----G~P~P~i~W~~~dg~~i~~-----------~~~~~~--~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
+.|.|.+. |.|.|.+.|++ ++..+.. ..+... ...+++|.|.++..+ |+|.|+|.|
T Consensus 12 v~L~C~~~~~~~~~~~~~~~W~~-~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~ 84 (201)
T 1dr9_A 12 ATLSCGHNVSVEELAQTRIYWQK-EKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPS------DEGTYECVV 84 (201)
T ss_dssp EEECCSCCCCTTHHHHCEEEEEE-TTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGG------GCEEEEEEE
T ss_pred EEEecccCCCcccccccEEEEEe-CCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccch------hCeEEEEEE
Confidence 89999995 66889999975 7776521 111111 123569999988765 899999999
Q ss_pred EcCCCceE
Q psy5697 124 SNEAGVIL 131 (145)
Q Consensus 124 ~N~~G~~~ 131 (145)
.|..|...
T Consensus 85 ~~~~g~~~ 92 (201)
T 1dr9_A 85 LKYEKDAF 92 (201)
T ss_dssp EECCTTSC
T ss_pred EcCCCCcc
Confidence 99988763
No 369
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.77 E-value=3e-08 Score=77.24 Aligned_cols=76 Identities=11% Similarity=0.057 Sum_probs=49.3
Q ss_pred EEEEcCCC-CC--ccCeEEEeeEecc-CCC---EEEEEccCCeEeecccCceEEe------eCCcEEEcCCCCCCCCCCC
Q psy5697 48 FRIKSAPG-GN--RTRGLELTRQTRY-EPS---QLGWRFSNNTVIAYVKDLRIAL------SNGSLMFPPFPETGFRPDV 114 (145)
Q Consensus 48 ~~i~~p~~-~~--~~g~~L~C~a~G~-P~P---~i~W~~~dg~~i~~~~~~~~~~------~~GsL~i~~~~~~~~~~~~ 114 (145)
+++..|.. .. +..+.|.|.+.|. |.| +|+|++.+|..+.......... .+++|.|.++..+
T Consensus 115 v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~------ 188 (323)
T 2wqr_A 115 AYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWI------ 188 (323)
T ss_dssp EEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHH------
T ss_pred EEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHcc------
Confidence 55555543 12 3349999999997 567 9999876666553221111111 2346898877654
Q ss_pred CCeEEEEEEEcCCCc
Q psy5697 115 HSTVYRCRASNEAGV 129 (145)
Q Consensus 115 d~G~Y~C~A~N~~G~ 129 (145)
|+|.|+|.|.|..+.
T Consensus 189 D~G~Y~C~a~n~~~~ 203 (323)
T 2wqr_A 189 EGETYQCRVTHPHLP 203 (323)
T ss_dssp TTCCEEEEEECTTSS
T ss_pred CCCCEEEEEECCCCC
Confidence 899999999999753
No 370
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.77 E-value=3.5e-08 Score=79.95 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=60.6
Q ss_pred eecCceeEeeccccCcccCCceeeeEEE-eccCCCCCCCEEE-EcCCCCCcc--CeEEEeeEecc-CCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVY-SSRSENEHYPFRI-KSAPGGNRT--RGLELTRQTRY-EPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~P~~i-~~p~~~~~~--g~~L~C~a~G~-P~P-~i~W~~~dg~ 83 (145)
..|.+.|.|...+..... ..++..+. ........+|.+. ..|...... .+.|.|.+.|. |.| +|+|+ +||.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~--~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~-~~~~ 164 (444)
T 1igt_B 88 SEDTAMYYCARHGGYYAM--DYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWN-SGSL 164 (444)
T ss_dssp GGGCEEEEEEEECSSSCE--EEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEG-GGTB
T ss_pred HHHCEEEEEEEecCCccc--ccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEe-cCCC
Confidence 568888888775432110 01111110 0111123356444 444433223 38999999996 877 99996 4665
Q ss_pred Eee--cccCc---eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 84 VIA--YVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 84 ~i~--~~~~~---~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+. ..+.. ......++|.|.++..+ | |.|+|.|+|..|..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d-g~Y~C~a~n~~~~~ 209 (444)
T 1igt_B 165 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWP------S-QSITCNVAHPASST 209 (444)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECSTTTT------T-SCCEEEEEETTTTE
T ss_pred CCCeEecCccccCCcEEEEEEEEEchhhcC------C-CeEEEEEEeCCCCc
Confidence 421 11110 01111246788665432 7 99999999999985
No 371
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.77 E-value=1.8e-08 Score=76.58 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=44.3
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .|.|.|++.+ |..+. ..++...... +++|.|.++..+ |
T Consensus 17 ~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D 90 (256)
T 1nqb_A 17 SVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSE------D 90 (256)
T ss_dssp CEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred cEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChh------h
Confidence 399999999986 7899998742 32211 0112222221 237999988765 8
Q ss_pred CeEEEEEEEcCCCc
Q psy5697 116 STVYRCRASNEAGV 129 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~ 129 (145)
+|.|+|.|.|..|.
T Consensus 91 sG~Y~C~~~n~~g~ 104 (256)
T 1nqb_A 91 SAVYYCARYDYYGS 104 (256)
T ss_dssp CEEEEEEECCTTSS
T ss_pred CEEEEEEEeeccCc
Confidence 99999999999873
No 372
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.77 E-value=3.3e-08 Score=74.67 Aligned_cols=69 Identities=10% Similarity=0.084 Sum_probs=49.2
Q ss_pred CeEEEeeEec-cCCC--EEEEEccCCeEeecccCceEEeeCCcEEEcCC---CCCCCCCCCCCe--EEEEEEEcCCCce-
Q psy5697 60 RGLELTRQTR-YEPS--QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPF---PETGFRPDVHST--VYRCRASNEAGVI- 130 (145)
Q Consensus 60 g~~L~C~a~G-~P~P--~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~---~~~~~~~~~d~G--~Y~C~A~N~~G~~- 130 (145)
.+.|.|.+.| .|.| +|+|++ ||..+.. .....+++|.+..+ ..+ |+| .|+|.|.|..|..
T Consensus 20 ~v~l~C~~~g~~p~p~~~v~W~k-~~~~l~~----~~~~~~~~~~~~~~~~~~~~------d~g~g~Y~C~a~n~~~~~~ 88 (265)
T 2oz4_A 20 QGTVVCSLDGLFPVSEAQVHLAL-GDQRLNP----TVTYGNDSFSAKASVSVTAE------DEGTQRLTCAVILGNQSQE 88 (265)
T ss_dssp EEEEEEEEESCSCGGGCEEEEEE-TTEECCC----EEEECSSEEEEEEEEEECGG------GCEEEEEEEEEEETTEEEE
T ss_pred CEEEEEEccCCCCCcceEEEEEe-CCEECCc----eEeeCCCeEEEEeecccccc------cCCcceEEEEEecCCCCcE
Confidence 3899999999 8888 999985 7777642 23344556776554 322 667 5999999999986
Q ss_pred EEEEEEEEe
Q psy5697 131 LSRFVHVKA 139 (145)
Q Consensus 131 ~s~~v~v~~ 139 (145)
.+..+.|..
T Consensus 89 ~~~~l~V~~ 97 (265)
T 2oz4_A 89 TLQTVTIYS 97 (265)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 444566653
No 373
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.76 E-value=3.7e-08 Score=74.38 Aligned_cols=75 Identities=7% Similarity=-0.058 Sum_probs=48.2
Q ss_pred CCEEEEcCCC-CCcc--CeEEEeeEecc-CCCEEEEEccC-CeEeec-----------ccCceEEe-----eCCcEEEcC
Q psy5697 46 YPFRIKSAPG-GNRT--RGLELTRQTRY-EPSQLGWRFSN-NTVIAY-----------VKDLRIAL-----SNGSLMFPP 104 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~--g~~L~C~a~G~-P~P~i~W~~~d-g~~i~~-----------~~~~~~~~-----~~GsL~i~~ 104 (145)
+|.+++.|.. .... .+.|.|.+.+. |.|.+.|++.+ +..+.. .++..... .+.+|.|.+
T Consensus 136 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 215 (259)
T 3omz_A 136 AQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISA 215 (259)
T ss_dssp -CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESS
T ss_pred CeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECC
Confidence 4677777765 2233 39999999886 89999998743 222110 01111221 124699998
Q ss_pred CCCCCCCCCCCCeEEEEEEEcC
Q psy5697 105 FPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 105 ~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
+..+ |+|.|.|.|++.
T Consensus 216 v~~~------DsG~Y~C~~~~~ 231 (259)
T 3omz_A 216 LQLE------DSAKYFCALGES 231 (259)
T ss_dssp CCGG------GCSEEEEEEESC
T ss_pred CChh------HCEEEEEEEeCc
Confidence 8765 899999999864
No 374
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.76 E-value=1.8e-08 Score=77.10 Aligned_cols=87 Identities=11% Similarity=0.079 Sum_probs=54.8
Q ss_pred CEEEEcCCC-CCc--cCeEEEeeEeccC------CCEEEEEccC-CeEe---ec--------ccCceEE-ee--CCcEEE
Q psy5697 47 PFRIKSAPG-GNR--TRGLELTRQTRYE------PSQLGWRFSN-NTVI---AY--------VKDLRIA-LS--NGSLMF 102 (145)
Q Consensus 47 P~~i~~p~~-~~~--~g~~L~C~a~G~P------~P~i~W~~~d-g~~i---~~--------~~~~~~~-~~--~GsL~i 102 (145)
+.+.+.|.+ .+. ..++|.|.+.|.| .|.|.|++.+ |..+ .. ..+.... .. +++|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 455565655 222 3399999999998 7999998743 3221 10 1111122 22 238999
Q ss_pred cCCCCCCCCCCCCCeEEEEEEEcCCCceE--EEEEEEEe
Q psy5697 103 PPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHVKA 139 (145)
Q Consensus 103 ~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~--s~~v~v~~ 139 (145)
.++..+ |+|.|.|.|.|..+... ...+.|..
T Consensus 86 ~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 118 (264)
T 2gjj_A 86 GSVKAE------DLAVYYCQQYSNYPWTFGGGTRLEIKR 118 (264)
T ss_dssp SSCCGG------GCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CCCCHH------HCEEEEEEEecCCccEecCCEEEEEEc
Confidence 988765 89999999999876432 23455543
No 375
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.76 E-value=1.7e-08 Score=69.16 Aligned_cols=61 Identities=10% Similarity=0.187 Sum_probs=42.2
Q ss_pred CeEEEeeEeccCCCEEEEEccC-Ce---Eeec--------ccCceE-EeeC--CcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NT---VIAY--------VKDLRI-ALSN--GSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~---~i~~--------~~~~~~-~~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.++|.|.+.|.|.+.|.|++.+ |. .+.. .++... ...+ .+|.|.+++.+ |+|.|.|.+.
T Consensus 20 ~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~ 93 (119)
T 2e27_L 20 KVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPE------DAATYYCLQY 93 (119)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGG------GCEEEEEEEC
T ss_pred CEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChH------HCEEEEEEEc
Confidence 3999999999999999999743 22 1210 011111 1222 27999988765 8999999999
Q ss_pred cC
Q psy5697 125 NE 126 (145)
Q Consensus 125 N~ 126 (145)
|.
T Consensus 94 ~~ 95 (119)
T 2e27_L 94 DN 95 (119)
T ss_dssp GG
T ss_pred cC
Confidence 86
No 376
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.76 E-value=1.8e-08 Score=72.26 Aligned_cols=67 Identities=12% Similarity=0.061 Sum_probs=44.9
Q ss_pred CeEEEeeEeccCCCE---EEEEccCCeEeec------c-----------cCceE------EeeCCcEEEcCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEPSQ---LGWRFSNNTVIAY------V-----------KDLRI------ALSNGSLMFPPFPETGFRPD 113 (145)
Q Consensus 60 g~~L~C~a~G~P~P~---i~W~~~dg~~i~~------~-----------~~~~~------~~~~GsL~i~~~~~~~~~~~ 113 (145)
.+.|.|.+.|.|.|. |+|+|.+ ..+.. . .+... ...+++|.|.++..+
T Consensus 16 ~v~L~C~v~~~~~~~~~~V~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~----- 89 (218)
T 4frw_A 16 DAKLPCFYRGDSGEQVGQVAWARVD-AGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA----- 89 (218)
T ss_dssp CEEECCEECCCTTCEEEEEEEEEEC-SSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGG-----
T ss_pred CEEEEEEEEcCCCCCccEEEEEECC-CCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHH-----
Confidence 399999999999774 8998633 22110 0 00001 112457999988765
Q ss_pred CCCeEEEEEEEcCCCceEEE
Q psy5697 114 VHSTVYRCRASNEAGVILSR 133 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~G~~~s~ 133 (145)
|+|.|.|.+.|..+.....
T Consensus 90 -D~G~Y~C~~~~~~~~~~~~ 108 (218)
T 4frw_A 90 -DEGEYECRVSTFPAGSFQA 108 (218)
T ss_dssp -GCEEEEEEEEEETTEEEEE
T ss_pred -HCCceeEEEEeccCceeee
Confidence 8999999999988876444
No 377
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.76 E-value=5.3e-08 Score=64.99 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=46.7
Q ss_pred EEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccC-Ce---Eeec--------ccCceEEe-eC--CcEEEcCCCCCCC
Q psy5697 49 RIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSN-NT---VIAY--------VKDLRIAL-SN--GSLMFPPFPETGF 110 (145)
Q Consensus 49 ~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~d-g~---~i~~--------~~~~~~~~-~~--GsL~i~~~~~~~~ 110 (145)
+.+.|.+ .+.. .++|.|.+.+.|.+.|.|++.+ |. .+.. .++..... .+ .+|.|.++..+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~-- 81 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAE-- 81 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTT--
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChh--
Confidence 3444554 2333 3999999999999999998743 22 1210 11111111 12 27999988766
Q ss_pred CCCCCCeEEEEEEEcCC
Q psy5697 111 RPDVHSTVYRCRASNEA 127 (145)
Q Consensus 111 ~~~~d~G~Y~C~A~N~~ 127 (145)
|+|.|.|.+.|..
T Consensus 82 ----DsG~Y~C~~~~~~ 94 (108)
T 1qfw_M 82 ----DFADYHCGQTYNH 94 (108)
T ss_dssp ----CCSEEEEEECSSS
T ss_pred ----hCEEEEEEEccCC
Confidence 8999999999863
No 378
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.76 E-value=1e-07 Score=70.28 Aligned_cols=112 Identities=12% Similarity=0.073 Sum_probs=59.3
Q ss_pred eecCceeEeeccccCcccCCceeee--EEEeccCCCCCCCEEEE-cCCCCCc--cCeEEEeeEecc-CCC-EEEEEccCC
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGN--IVYSSRSENEHYPFRIK-SAPGGNR--TRGLELTRQTRY-EPS-QLGWRFSNN 82 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~P~~i~-~p~~~~~--~g~~L~C~a~G~-P~P-~i~W~~~dg 82 (145)
..|+++|.|.......... .+|. .+.. ......+|.+.. .|..... ..+.|.|.+.|. |.| +|+|++ +|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~--~~~~~~~L~V-~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g 162 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFD--YWGPGTMVTV-SSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNS-GA 162 (215)
T ss_dssp GGGCEEEEEEECCSSSCSC--CBCCCEEEEE-CSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGG-GT
T ss_pred cccCEEEEEEEecCCcccc--eEcCCEEEEe-cCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEcc-CC
Confidence 6788899998865421100 1111 1111 112234565544 4333222 338999999997 888 999964 66
Q ss_pred eEeecccCceEEeeCCcEEEcC-CCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 83 TVIAYVKDLRIALSNGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 83 ~~i~~~~~~~~~~~~GsL~i~~-~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
..+...... ....+|+..+.. +... ...| |.|+|.|+|..|..
T Consensus 163 ~~~~~~~~~-~~~~~g~~~~~s~L~~~---~~~~-g~ytC~v~n~~~~~ 206 (215)
T 1c5d_H 163 LSSDVHTFP-AVLQSGLYTLTSSVTSS---TWPS-QTVTCNVAHPASST 206 (215)
T ss_dssp TCCSCCBCC-CEEETTEEEEEEEEEES---STTT-SCCEEEEEEGGGTE
T ss_pred ccCceEecC-cccCCCCEEEEEEEecc---cCCC-CeEEEEEEeCCCCc
Confidence 543211111 112235433211 1111 1114 99999999999875
No 379
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.75 E-value=9.5e-09 Score=85.97 Aligned_cols=71 Identities=21% Similarity=0.373 Sum_probs=52.9
Q ss_pred eEEEeeE-eccCCCEEEEEccCCeEee-----------cccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 61 GLELTRQ-TRYEPSQLGWRFSNNTVIA-----------YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 61 ~~L~C~a-~G~P~P~i~W~~~dg~~i~-----------~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
++|.|.+ .|.|.|.|+|++. +..+. ...+......+|+|.|.+++.+ |+|.|+|.|.|..|
T Consensus 384 v~L~C~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~------D~G~Y~C~~~n~~~ 456 (581)
T 3o3u_N 384 LVLKCKGAPKKPPQRLEWKLN-TGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQ------DEGIFRCQAMNRNG 456 (581)
T ss_dssp EEECCTTCCSSSSCEEEEEEE-ETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGG------GCEEEEEEEECTTS
T ss_pred EEEeeeecCCCCCceEEEEEc-CCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccc------cCeEEEEEEEcCCC
Confidence 8999999 8999999999864 33210 0122345667889999988765 89999999999999
Q ss_pred ceEEEEEEEE
Q psy5697 129 VILSRFVHVK 138 (145)
Q Consensus 129 ~~~s~~v~v~ 138 (145)
...+..+.|.
T Consensus 457 ~~~~~~~~l~ 466 (581)
T 3o3u_N 457 KETKSNYRVR 466 (581)
T ss_dssp CEEEEEEEEE
T ss_pred ceeEEEEEEE
Confidence 8744444443
No 380
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.75 E-value=1.9e-08 Score=79.08 Aligned_cols=73 Identities=14% Similarity=0.182 Sum_probs=47.5
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|.+ .|.|+|++.+ |..+. ...+...+.. +++|.|.++..+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D 90 (344)
T 1za6_B 17 SVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSE------D 90 (344)
T ss_dssp CEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred cEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcc------c
Confidence 399999999984 7899998753 43221 0112222222 238999988765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+|.|+|.|.|..+.. ....+.|.
T Consensus 91 ~G~Y~C~~~n~~~~~~~~~~l~V~ 114 (344)
T 1za6_B 91 TAVYFCTRSLNMAYWGQGTLVTVS 114 (344)
T ss_dssp CEEEEEEETTTTCEECCCEEEEEC
T ss_pred CEEEEEEEecCcceecCcEEEEEe
Confidence 999999999976543 23344444
No 381
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.75 E-value=1.9e-08 Score=75.15 Aligned_cols=74 Identities=18% Similarity=0.134 Sum_probs=48.2
Q ss_pred CeEEEeeEeccCCCE-----EEEEccCCeEe-----ec-ccCceEE-------------eeCCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEPSQ-----LGWRFSNNTVI-----AY-VKDLRIA-------------LSNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P~P~-----i~W~~~dg~~i-----~~-~~~~~~~-------------~~~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|.|+|. |+|++.++... .. ....... ..+.+|.|.++..+ |
T Consensus 20 ~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~------D 93 (248)
T 3pv7_A 20 NVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLE------E 93 (248)
T ss_dssp CEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGG------G
T ss_pred CEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHH------H
Confidence 399999999999987 99987532211 00 0000000 12336999988765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEe
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVKA 139 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~~ 139 (145)
+|.|+|.|.|..|.. ....+.|..
T Consensus 94 ~G~Y~C~~~~~~~~~~~~~~L~V~~ 118 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKAQGTVQLEVVA 118 (248)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred CeEEEEEEEeCCccceeEEEEEEec
Confidence 999999999998875 333455543
No 382
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.75 E-value=3e-08 Score=75.49 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=51.3
Q ss_pred CCEEEEcCCC-CCccC--eEEEeeEeccC-----CCEEEEEccC-CeE---eec--------ccCceEE-eeC--CcEEE
Q psy5697 46 YPFRIKSAPG-GNRTR--GLELTRQTRYE-----PSQLGWRFSN-NTV---IAY--------VKDLRIA-LSN--GSLMF 102 (145)
Q Consensus 46 ~P~~i~~p~~-~~~~g--~~L~C~a~G~P-----~P~i~W~~~d-g~~---i~~--------~~~~~~~-~~~--GsL~i 102 (145)
.+.+.+.|.+ .+..| ++|.|.+.|.| .+.|.|++.+ |.. +.. .++.... ..+ ++|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 3556666665 33333 99999999998 5999998753 321 110 1111122 222 37999
Q ss_pred cCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 103 PPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 103 ~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.++..+ |+|.|.|.|.|..+.
T Consensus 95 ~~v~~~------DsG~Y~C~~~~~~~~ 115 (268)
T 1x9q_A 95 NRVEAE------DLGVYFCSQSTHVPW 115 (268)
T ss_dssp SSCCGG------GCEEEEEEECSSSSC
T ss_pred CCCChh------HCEEEEEEEecCCCc
Confidence 988765 899999999998664
No 383
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.74 E-value=3.4e-08 Score=74.87 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=61.8
Q ss_pred eceee-eecCceeEeeccccC-cccCCceeeeEEEeccCCCCCCCEEE-EcCCC-CC--ccCeEEEeeEeccCCC--EEE
Q psy5697 5 HISTL-LADADTYIIADRSLF-PRPLGYLVGNIVYSSRSENEHYPFRI-KSAPG-GN--RTRGLELTRQTRYEPS--QLG 76 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~P~~i-~~p~~-~~--~~g~~L~C~a~G~P~P--~i~ 76 (145)
+|..+ ..|+++|.|...... ....+... ...+........+|.+. ..|.. .. +..+.|.|.+.|.|+| +|+
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~-~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 181 (268)
T 3pl6_D 103 KIQRTERGDSAVYLCATSALGDTQYFGPGT-RLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 181 (268)
T ss_dssp EECSCCGGGCEEEEEEEESSSSSCEECCCE-EEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred EECCCCcccCEEEEEEEecCCCceeeCCcE-EEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEE
Confidence 34344 678899999875421 11100000 11111112233467544 44443 11 2338999999997765 999
Q ss_pred EEccCCeEeecccCceEE---------eeCCc------EEEcCCCCCCCCCCCC-CeEEEEEEEcCCCc
Q psy5697 77 WRFSNNTVIAYVKDLRIA---------LSNGS------LMFPPFPETGFRPDVH-STVYRCRASNEAGV 129 (145)
Q Consensus 77 W~~~dg~~i~~~~~~~~~---------~~~Gs------L~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G~ 129 (145)
|++ ||+.+.... ... ..+|+ |.|.+...+ | .|.|+|.|+|....
T Consensus 182 W~~-~g~~l~~~~--~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~------d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 182 WWV-NGKEVHSGV--CTDPQPLKEQPALNDSRYSLSSRLRVSATFWQ------NPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEE-SSSEECTTE--EECSSCEESSTTCTTCCEEEEEEEEEEHHHHS------CTTCEEEEEEEECCBC
T ss_pred EEE-CCEECCCCe--EeccccccccccCCCCcEEEEEEEEEcHHHhc------cCCCEEEEEEEcCCCC
Confidence 975 888775321 110 02343 444432211 4 89999999998654
No 384
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.74 E-value=7.4e-08 Score=80.53 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=63.4
Q ss_pred eecCceeEeeccccCccc-CCceeeeEEEeccCCCCCCCEEEEcCCCCCcc-C-eEEEeeEec-cCCCEEEEEccCCeEe
Q psy5697 10 LADADTYIIADRSLFPRP-LGYLVGNIVYSSRSENEHYPFRIKSAPGGNRT-R-GLELTRQTR-YEPSQLGWRFSNNTVI 85 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~P~~i~~p~~~~~~-g-~~L~C~a~G-~P~P~i~W~~~dg~~i 85 (145)
..|.+.|.|...+..... ..... -.|.. ....|.+...+...... . +.|.|.+.| +|.|+|+|+ +||+++
T Consensus 441 ~~D~G~Y~C~~~n~~~~~~~~~~~-l~V~~----~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~-~~g~~l 514 (581)
T 3o3u_N 441 IQDEGIFRCQAMNRNGKETKSNYR-VRVYQ----IPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWH-LDGKPL 514 (581)
T ss_dssp GGGCEEEEEEEECTTSCEEEEEEE-EEEEB----CCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEE-ETTEEC
T ss_pred cccCeEEEEEEEcCCCceeEEEEE-EEEEc----CCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEE-ECCEEC
Confidence 678888988876533222 11111 00111 12345544333322222 2 568999998 699999997 588887
Q ss_pred ecccCceEE----e---eCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 86 AYVKDLRIA----L---SNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 86 ~~~~~~~~~----~---~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
........+ . .+| +|.|.++.+++ +.|.|+|.|+|.++..
T Consensus 515 ~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d-----~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 515 VPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGD-----PRPTFSCSFSPGLPRH 567 (581)
T ss_dssp CTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSC-----SCCCEEEEEECSSCSS
T ss_pred CCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccC-----CCceEEEEEeccCCCC
Confidence 643222111 1 223 58887765432 5899999999997543
No 385
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.74 E-value=3.6e-08 Score=75.84 Aligned_cols=63 Identities=11% Similarity=0.207 Sum_probs=44.0
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .|.|.|++.+ |..+. ..++...... +++|.|.++..+ |
T Consensus 43 ~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D 116 (282)
T 1qok_A 43 SVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSE------D 116 (282)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred eEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChh------h
Confidence 399999999996 6999998753 22111 0111222221 247999988765 8
Q ss_pred CeEEEEEEEcCCC
Q psy5697 116 STVYRCRASNEAG 128 (145)
Q Consensus 116 ~G~Y~C~A~N~~G 128 (145)
+|.|+|.|.|..|
T Consensus 117 sG~Y~C~~~n~~g 129 (282)
T 1qok_A 117 TAVYYCNEGTPTG 129 (282)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEeccCCC
Confidence 9999999999987
No 386
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.73 E-value=1.9e-08 Score=75.04 Aligned_cols=115 Identities=13% Similarity=0.103 Sum_probs=61.8
Q ss_pred eceee-eecCceeEeeccccCcccCCceeee---EEEeccCCCCCCCEE-EEcCCCC-C--ccCeEEEeeEecc-CCC-E
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGN---IVYSSRSENEHYPFR-IKSAPGG-N--RTRGLELTRQTRY-EPS-Q 74 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~P~~-i~~p~~~-~--~~g~~L~C~a~G~-P~P-~ 74 (145)
+|..+ ..|++.|.|....... .....++. ..+........+|.+ +..|... . +..+.|.|.+.|. |+| +
T Consensus 79 ~I~~v~~~D~G~Y~C~~~~~~~-~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 157 (245)
T 4ei6_B 79 KIQPTALEDSAVYFCASSFWGA-YAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 157 (245)
T ss_dssp EECSCCGGGCEEEEEEEECSST-TCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EECCCCHhHCEEEEEEEccCCC-cceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeE
Confidence 34444 7788899988753110 00001111 111111112345654 4444431 1 2338999999994 545 8
Q ss_pred EEEEccCCeEeecccCceEEe---------eCCc------EEEcCCCCCCCCCCCC-CeEEEEEEEcCCCc
Q psy5697 75 LGWRFSNNTVIAYVKDLRIAL---------SNGS------LMFPPFPETGFRPDVH-STVYRCRASNEAGV 129 (145)
Q Consensus 75 i~W~~~dg~~i~~~~~~~~~~---------~~Gs------L~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G~ 129 (145)
|+|++ ||..+.... .... .+|+ |.|.+...+ | .|.|+|.|+|....
T Consensus 158 v~W~~-~g~~l~~~~--~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 158 LSWWV-NGKEVHSGV--CTDPQPLKEQPALNDSRYALSSRLRVSATFWQ------NPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EEEEE-TTEEECTTE--EECSSCEESSTTSTTCCEEEEEEEEEEHHHHS------CTTCEEEEEEEECCBC
T ss_pred EEEEE-CCEECCCCc--ccccccccccccCCCCCEEEEEEEEEcHHHhc------cCCCeEEEEEEECCCC
Confidence 99975 888875321 1100 2443 566543222 4 89999999998543
No 387
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.73 E-value=3.8e-08 Score=76.61 Aligned_cols=108 Identities=16% Similarity=0.189 Sum_probs=61.4
Q ss_pred eecCceeEeeccccC-cccCCceeeeEEEeccCCCCCCCEEEE-cCCC-CC-ccCeEEEeeEecc-CCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLF-PRPLGYLVGNIVYSSRSENEHYPFRIK-SAPG-GN-RTRGLELTRQTRY-EPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~P~~i~-~p~~-~~-~~g~~L~C~a~G~-P~P-~i~W~~~dg~ 83 (145)
..|++.|.|...+.. ... .. ...........+|.+.. .+.. .. +..+.|.|.+.|. |++ +|+|+ +||.
T Consensus 187 ~~D~G~Y~C~a~n~~~~~~---~~--~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~-k~g~ 260 (323)
T 2wqr_A 187 WIEGETYQCRVTHPHLPRA---LM--RSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWL-HNEV 260 (323)
T ss_dssp HHTTCCEEEEEECTTSSSC---EE--EEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEE-ETTE
T ss_pred ccCCCCEEEEEECCCCCCC---ee--eEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEE-ECCE
Confidence 357778888765432 111 11 11111112345675544 3332 22 2238999999995 443 89997 5888
Q ss_pred EeecccCc---eEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 84 VIAYVKDL---RIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 84 ~i~~~~~~---~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.+...... .....+| +|.|.++..+ |.|.|+|.|+|..+.
T Consensus 261 ~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 261 QLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWE------QKDEFICRAVHEAAS 309 (323)
T ss_dssp ECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHH------HCCCEEEEEECTTST
T ss_pred ECCCCceeecCcccCCCCcEEEEEEEEEChHHcc------CCCEEEEEEEeCCCC
Confidence 87532100 1112233 5777665433 789999999999876
No 388
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.73 E-value=3.9e-08 Score=66.16 Aligned_cols=61 Identities=15% Similarity=0.107 Sum_probs=41.2
Q ss_pred CeEEEeeEecc--CCCEEEEEccC-Ce----EeecccCceEEe--e--CCcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 60 RGLELTRQTRY--EPSQLGWRFSN-NT----VIAYVKDLRIAL--S--NGSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 60 g~~L~C~a~G~--P~P~i~W~~~d-g~----~i~~~~~~~~~~--~--~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
.++|.|.+.|. |.+.+.|++.+ |. .+....+..... . +.+|.|.++..+ |+|.|.|.+.|.
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~~~ 88 (111)
T 2ywz_A 17 SLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVE------DSGTYKCQADYS 88 (111)
T ss_dssp CEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEEEEEC
T ss_pred CEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChh------cCEEEEEEEEcC
Confidence 39999999987 67899998742 32 121111221111 1 237999988765 899999999993
No 389
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.72 E-value=1.7e-08 Score=76.59 Aligned_cols=79 Identities=9% Similarity=0.042 Sum_probs=48.9
Q ss_pred CCC-EEEEcCCCC--CccC--eEEEeeEecc---CCC-EEEEEccCCeEeecc-cCceEEe------eCCcEEEcCCCCC
Q psy5697 45 HYP-FRIKSAPGG--NRTR--GLELTRQTRY---EPS-QLGWRFSNNTVIAYV-KDLRIAL------SNGSLMFPPFPET 108 (145)
Q Consensus 45 ~~P-~~i~~p~~~--~~~g--~~L~C~a~G~---P~P-~i~W~~~dg~~i~~~-~~~~~~~------~~GsL~i~~~~~~ 108 (145)
.+| +++..|... ...| +.|.|.+.|. |.| .|+|++.+ ..+... ....... ..++|.|.++..+
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~ 92 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDD-VEVHTAQTHAPEKQSNSTLRSVSELPIVERDWL 92 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESS-CEECCCEECCCEECTTSCEEEEEEEECCHHHHH
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECC-ccccCcccccceEcCCCcEEEEEEEEEEhhHcc
Confidence 344 555544333 3344 8999999998 888 99998644 443211 0001111 2236888766544
Q ss_pred CCCCCCCCeEEEEEEEcCCCce
Q psy5697 109 GFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|.|..|..
T Consensus 93 ------D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 93 ------NGKTFKCKVNSGAFPA 108 (239)
T ss_dssp ------TTCCEEEEEECSSSSS
T ss_pred ------CCCeEEEEEecccCCC
Confidence 7999999999999864
No 390
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.72 E-value=2e-08 Score=73.27 Aligned_cols=61 Identities=11% Similarity=0.052 Sum_probs=42.4
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEee-----------cccCceE-EeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVIA-----------YVKDLRI-ALSNG--SLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i~-----------~~~~~~~-~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.+.|.|.+.|.|.|.|+|++.+ |..+. ..+.... ...++ +|.|.++..+ |+|.|+|.|.
T Consensus 16 ~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~ 89 (212)
T 1nfd_E 16 TVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPE------DEAAYYCLSS 89 (212)
T ss_dssp CCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGG------GCSEEEEEEE
T ss_pred cEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcc------cCEEEEEEEE
Confidence 3899999999999999998643 43321 0011222 22223 7999988765 8999999999
Q ss_pred cC
Q psy5697 125 NE 126 (145)
Q Consensus 125 N~ 126 (145)
|.
T Consensus 90 n~ 91 (212)
T 1nfd_E 90 YG 91 (212)
T ss_dssp ET
T ss_pred cc
Confidence 83
No 391
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.72 E-value=1.6e-08 Score=74.99 Aligned_cols=63 Identities=11% Similarity=0.170 Sum_probs=40.5
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEee--------------ccc-CceEEe---eCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVIA--------------YVK-DLRIAL---SNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i~--------------~~~-~~~~~~---~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|. .|.|.|.|+|++.+ |.... ..+ +..... .+.+|.|.++..+ |+|.|+
T Consensus 17 ~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~------DsG~Y~ 89 (238)
T 2p1y_A 17 KVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPS------QTSVYF 89 (238)
T ss_dssp CEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGG------GCEEEE
T ss_pred EEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcc------cCeeEE
Confidence 3999999 89999999998742 22110 011 111221 1347999988765 899999
Q ss_pred EEEEcCCCc
Q psy5697 121 CRASNEAGV 129 (145)
Q Consensus 121 C~A~N~~G~ 129 (145)
|.|.|..|.
T Consensus 90 C~~~~~~g~ 98 (238)
T 2p1y_A 90 CASGDLGQT 98 (238)
T ss_dssp EEEEC----
T ss_pred EEEEeCCCc
Confidence 999999773
No 392
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.72 E-value=2.2e-08 Score=75.08 Aligned_cols=81 Identities=7% Similarity=-0.071 Sum_probs=51.1
Q ss_pred CCCCCCE-EEEcCCC-C--CccCeEEEeeEecc-CC-C-EEEEEccCCeEe-ecccCceEEeeCC------cEEEcCCCC
Q psy5697 42 ENEHYPF-RIKSAPG-G--NRTRGLELTRQTRY-EP-S-QLGWRFSNNTVI-AYVKDLRIALSNG------SLMFPPFPE 107 (145)
Q Consensus 42 ~~~~~P~-~i~~p~~-~--~~~g~~L~C~a~G~-P~-P-~i~W~~~dg~~i-~~~~~~~~~~~~G------sL~i~~~~~ 107 (145)
....+|. ++..|.. . .+..+.|.|.+.|. |. | .|+|+ +||..+ ...........+| +|.|.++..
T Consensus 8 ~~~~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~-~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~ 86 (231)
T 2w59_A 8 QSCSPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWT-REKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDW 86 (231)
T ss_dssp ----CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEE-CSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHH
T ss_pred CCCCCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEE-cCCeeccccccccceECCCCcEEEEEEEEecchhc
Confidence 3345564 4566655 2 23349999999995 74 6 99998 588766 3222111222344 488876654
Q ss_pred CCCCCCCCCeEEEEEEEcCCCc
Q psy5697 108 TGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 108 ~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+ |+|.|+|.|.|..+.
T Consensus 87 ~------D~g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 87 L------SGERFTCTVQHEELP 102 (231)
T ss_dssp H------TTCCEEEEEECTTCS
T ss_pred c------CCCEEEEEEEcCCCC
Confidence 3 799999999999875
No 393
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.72 E-value=7.3e-08 Score=70.00 Aligned_cols=61 Identities=20% Similarity=0.140 Sum_probs=43.3
Q ss_pred eEEEeeEec-cCCCEEEEEccCCeEee-------------cccCceEE-eeCCcEEEcCCCCCCCCCCCCCeEEEEEEEc
Q psy5697 61 GLELTRQTR-YEPSQLGWRFSNNTVIA-------------YVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASN 125 (145)
Q Consensus 61 ~~L~C~a~G-~P~P~i~W~~~dg~~i~-------------~~~~~~~~-~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N 125 (145)
++|.|.+.+ .+.+.|.|++.++..+. ..++...+ ..+|+|.|.+++.+ |+|.|+|.+.|
T Consensus 17 vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~------D~G~Y~C~v~~ 90 (180)
T 2dru_A 17 VTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKE------DRGDYYMRMLH 90 (180)
T ss_dssp EEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGG------GCEEEEEEEES
T ss_pred EEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHH------HCeEEEEEEEc
Confidence 999999865 34799999874333321 01122233 46789999988765 89999999988
Q ss_pred CC
Q psy5697 126 EA 127 (145)
Q Consensus 126 ~~ 127 (145)
..
T Consensus 91 ~~ 92 (180)
T 2dru_A 91 ET 92 (180)
T ss_dssp SS
T ss_pred CC
Confidence 76
No 394
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.72 E-value=2.2e-08 Score=73.45 Aligned_cols=109 Identities=14% Similarity=0.109 Sum_probs=60.0
Q ss_pred CceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCC-C-Ccc-CeEEEeeEecc-CC-CEEEEEccCCeEeec
Q psy5697 13 ADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPG-G-NRT-RGLELTRQTRY-EP-SQLGWRFSNNTVIAY 87 (145)
Q Consensus 13 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~-~-~~~-g~~L~C~a~G~-P~-P~i~W~~~dg~~i~~ 87 (145)
++.|.|...+..... ...+. + ........+|.+...++. . ... .+.|.|.+.|. |+ ++|+|+ +||..+..
T Consensus 80 ~g~Y~C~a~n~~~~~--~~~~~-v-~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~-k~g~~~~~ 154 (207)
T 1l6x_A 80 GKEYKCKVSNKALPA--PIEKT-I-SKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWE-SNGQPENN 154 (207)
T ss_dssp TCCEEEEEECTTSSS--CEEEE-E-CCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE-ETTEEECC
T ss_pred CceEEEEEEcCcCCc--ceEEE-e-ccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEE-ECCeeccC
Confidence 778888775532211 11211 1 111134556765544443 1 122 28999999995 54 399997 48887753
Q ss_pred ccC-ceEEeeCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 88 VKD-LRIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 88 ~~~-~~~~~~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
... ......+|++.+.. +... ...|.|.|+|.|+|....
T Consensus 155 ~~~~~~~~~~~gt~~~~s~l~i~~~---~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 155 YKTTPPVLDSDGSFFLYSKLTVDKS---RWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHH---HHHTTCCEEEEEECTTSG
T ss_pred ccccCceECCCCCEEEEEEEEECHH---HcCCCCEEEEEEEcCCcC
Confidence 211 11234567655432 2111 012589999999998654
No 395
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.72 E-value=2e-08 Score=76.07 Aligned_cols=63 Identities=16% Similarity=0.094 Sum_probs=43.4
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---ee----------cccCceEE--e--eCCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IA----------YVKDLRIA--L--SNGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~----------~~~~~~~~--~--~~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.++|.|.+.|.|.|.|.|++.+ +.. +. ...+.... . .+++|.|.++..+ |+|.|.|
T Consensus 20 ~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~------DsG~Y~C 93 (256)
T 3tf7_C 20 SLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRS------DSAVYFC 93 (256)
T ss_dssp CEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGG------GCSEEEE
T ss_pred eEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcc------cCEEEEE
Confidence 3999999999999999998732 211 11 01111111 1 1237999988765 8999999
Q ss_pred EEEcCCC
Q psy5697 122 RASNEAG 128 (145)
Q Consensus 122 ~A~N~~G 128 (145)
.|.|..|
T Consensus 94 ~~~~~~~ 100 (256)
T 3tf7_C 94 AVSAKGT 100 (256)
T ss_dssp EEECTTC
T ss_pred EEecCCC
Confidence 9999876
No 396
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.71 E-value=1.3e-08 Score=72.87 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=44.6
Q ss_pred eEEEeeEeccCCCEEEEEccCCe-Eeecc-----------cCceEEe----eCC--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNT-VIAYV-----------KDLRIAL----SNG--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~-~i~~~-----------~~~~~~~----~~G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
+.|.|.+.|.|.|.|+|++.+.. .+... ....... .+| +|.|.++..+ |+|.|+|.
T Consensus 13 v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~ 86 (184)
T 2ny1_B 13 VELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIE------DSDTYICE 86 (184)
T ss_dssp EEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGG------GCEEEEEE
T ss_pred EEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHH------HCEEEEEE
Confidence 89999999999999999864432 22110 1111111 334 5999988765 89999999
Q ss_pred EEcCCCce
Q psy5697 123 ASNEAGVI 130 (145)
Q Consensus 123 A~N~~G~~ 130 (145)
|.|..|.+
T Consensus 87 ~~~~~~~~ 94 (184)
T 2ny1_B 87 VEDQKEEV 94 (184)
T ss_dssp ETTEEEEE
T ss_pred EEcCCCcE
Confidence 99997744
No 397
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.71 E-value=1.3e-08 Score=82.49 Aligned_cols=83 Identities=12% Similarity=0.085 Sum_probs=54.1
Q ss_pred CCEE-EEcCCCCC--cc--CeEEEeeEeccC----CCEEEEEccCCeEeecccC-ceEEee------CCcEEEcCCCCCC
Q psy5697 46 YPFR-IKSAPGGN--RT--RGLELTRQTRYE----PSQLGWRFSNNTVIAYVKD-LRIALS------NGSLMFPPFPETG 109 (145)
Q Consensus 46 ~P~~-i~~p~~~~--~~--g~~L~C~a~G~P----~P~i~W~~~dg~~i~~~~~-~~~~~~------~GsL~i~~~~~~~ 109 (145)
+|.+ +..|.... .. .+.|.|.+.|.| .++|+|++ ||..+..... ...... .++|.|.++..+
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~- 315 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFV-NNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWM- 315 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHH-
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEE-CCccccCcccccceeCCCCcEEEEEEEEEcHHHhc-
Confidence 6765 45443322 23 389999999994 36999985 7776643211 112222 347898877654
Q ss_pred CCCCCCCeEEEEEEEcCCCce-EEEEE
Q psy5697 110 FRPDVHSTVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 110 ~~~~~d~G~Y~C~A~N~~G~~-~s~~v 135 (145)
|+|.|+|.|.|..|.. ..+.+
T Consensus 316 -----d~G~Y~C~a~n~~~~~~~~~~v 337 (444)
T 1igt_B 316 -----SGKEFKCKVNNKDLPAPIERTI 337 (444)
T ss_dssp -----TTCEEEEEEECTTCSSCEEEEE
T ss_pred -----cCCcEEEEEEcCCCCCceEEEE
Confidence 8999999999999976 34444
No 398
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.71 E-value=1.7e-08 Score=77.75 Aligned_cols=62 Identities=11% Similarity=0.099 Sum_probs=41.1
Q ss_pred CeEEEeeEec-cC-CCEEEEEcc-CCeEeec-----------ccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTRQTR-YE-PSQLGWRFS-NNTVIAY-----------VKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~a~G-~P-~P~i~W~~~-dg~~i~~-----------~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.+.|.|.+.| .+ .+.+.|++. +|..+.. .+..... ..++ +|.|.++..+ |+|.|.|.
T Consensus 156 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~ 229 (280)
T 3fku_X 156 TATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPE------DEADYYCS 229 (280)
T ss_dssp CEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGG------GCSEEEEE
T ss_pred CEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHH------HCEEEEEE
Confidence 3999999999 55 489999863 2322210 0111111 2222 5999888765 89999999
Q ss_pred EEcCC
Q psy5697 123 ASNEA 127 (145)
Q Consensus 123 A~N~~ 127 (145)
+.|..
T Consensus 230 ~~~~~ 234 (280)
T 3fku_X 230 TWDSS 234 (280)
T ss_dssp EEETT
T ss_pred EecCC
Confidence 99987
No 399
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.71 E-value=1e-07 Score=81.50 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=46.8
Q ss_pred CeEEEeeEec--cCCCEEEEEccCCeEeecccCc----------eEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 60 RGLELTRQTR--YEPSQLGWRFSNNTVIAYVKDL----------RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 60 g~~L~C~a~G--~P~P~i~W~~~dg~~i~~~~~~----------~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.+.|.|.+.| .|.+.|+|++ +|..+...... ......++|.|.++..+ |+|.|+|.|.|..
T Consensus 241 ~v~L~C~~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~~~~ 313 (772)
T 3v2a_R 241 KLVLNCTARTELNVGIDFNWEY-PSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS------DQGLYTCAASSGL 313 (772)
T ss_dssp CEEEEEEEEECTTCCCEEEEEC-C--------CEEEEC-----CCCEEEEEEEEESSCCST------TCSEEEEEEECSS
T ss_pred cEEEEEEEecCCCCceeEEEec-CCccCCCceeeeccccccccccceEEEEEEEECcCCcC------CCeEEEEEEEcCC
Confidence 3999999998 5567899985 55543321111 01123347999887655 8999999999999
Q ss_pred Cce-EEEEEEEEe
Q psy5697 128 GVI-LSRFVHVKA 139 (145)
Q Consensus 128 G~~-~s~~v~v~~ 139 (145)
|.. .+..+.|..
T Consensus 314 ~~~~~~~~l~V~~ 326 (772)
T 3v2a_R 314 MTKKNSTFVRVHE 326 (772)
T ss_dssp CEEEEEEEEEEEC
T ss_pred cceeEEEEEEEeC
Confidence 975 344565554
No 400
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.71 E-value=1.9e-08 Score=73.28 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=41.9
Q ss_pred eEEEeeEeccCCCEEEEEccC-CeEee---c--------ccCceE---EeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEc
Q psy5697 61 GLELTRQTRYEPSQLGWRFSN-NTVIA---Y--------VKDLRI---ALSNGSLMFPPFPETGFRPDVHSTVYRCRASN 125 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~d-g~~i~---~--------~~~~~~---~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N 125 (145)
+.|.|.+. |.|.|.|++.+ |..+. . ...... ...+++|.|.++..+ |+|.|+|.|.|
T Consensus 18 v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~ 89 (211)
T 3tv3_L 18 ITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTD------DEAVYYCGSLV 89 (211)
T ss_dssp EEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGG------GCEEEEEEEEE
T ss_pred EEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChh------HCEEEEEEEec
Confidence 99999998 99999998732 22211 0 111111 112337999988766 89999999999
Q ss_pred CCC
Q psy5697 126 EAG 128 (145)
Q Consensus 126 ~~G 128 (145)
..|
T Consensus 90 ~~~ 92 (211)
T 3tv3_L 90 GNW 92 (211)
T ss_dssp TTT
T ss_pred CCC
Confidence 998
No 401
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.70 E-value=2.6e-08 Score=74.23 Aligned_cols=118 Identities=14% Similarity=0.134 Sum_probs=59.6
Q ss_pred eceee-eecCceeEeeccccCcccC---CceeeeEEEe-ccCCCCCCCEEEE-cCCCCCccC--eEEEeeEeccCCC--E
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPL---GYLVGNIVYS-SRSENEHYPFRIK-SAPGGNRTR--GLELTRQTRYEPS--Q 74 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~-~~~~~~~~P~~i~-~p~~~~~~g--~~L~C~a~G~P~P--~ 74 (145)
+|..+ ..|.++|.|.......... ..+++..+.. .......+|.+.. .|......| +.|.|.+.|.+++ +
T Consensus 86 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~ 165 (232)
T 3qhz_H 86 TMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (232)
T ss_dssp EECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCE
T ss_pred EECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeE
Confidence 44444 6788899998754310000 0112221111 1113345676663 443322223 8999999986543 5
Q ss_pred EEEEccCCeEeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 75 LGWRFSNNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 75 i~W~~~dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
++|+ ++|..+...........+| +|.|.+... .| |.|+|.|+|..+..
T Consensus 166 v~W~-~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~------~~-g~ytC~v~~~~~~~ 219 (232)
T 3qhz_H 166 VSWN-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL------GT-QTYICNVNHKPSNT 219 (232)
T ss_dssp EEEG-GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGG------GT-CCCEEEEEEGGGTE
T ss_pred EEEE-ECCEecceeeccceeCCCCCEEEEEEEEEchhhc------CC-CEEEEEEEeCCCCc
Confidence 7896 4665322111111122233 466655432 26 99999999998775
No 402
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.70 E-value=8.2e-08 Score=69.76 Aligned_cols=64 Identities=19% Similarity=0.064 Sum_probs=43.2
Q ss_pred CeEEEeeEecc-------CCCEEEEEccCCe-----Eee----------cccCceEEee-----CCcEEEcCCCCCCCCC
Q psy5697 60 RGLELTRQTRY-------EPSQLGWRFSNNT-----VIA----------YVKDLRIALS-----NGSLMFPPFPETGFRP 112 (145)
Q Consensus 60 g~~L~C~a~G~-------P~P~i~W~~~dg~-----~i~----------~~~~~~~~~~-----~GsL~i~~~~~~~~~~ 112 (145)
.+.|.|.+.+. |.+.|.|++.+.. .+. ...+...... +++|.|.++..+
T Consensus 17 ~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~---- 92 (214)
T 2zg1_A 17 CVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARME---- 92 (214)
T ss_dssp CEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCGG----
T ss_pred cEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCHh----
Confidence 39999999875 6899999864321 111 0111222222 348999988765
Q ss_pred CCCCeEEEEEEEcCCCc
Q psy5697 113 DVHSTVYRCRASNEAGV 129 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~ 129 (145)
|+|.|+|.+.|..|.
T Consensus 93 --D~G~Y~C~~~~~~~~ 107 (214)
T 2zg1_A 93 --DTGSYFFRVERGRDV 107 (214)
T ss_dssp --GCEEEEEEEEETTTE
T ss_pred --hCceEEEEEEcCCCc
Confidence 899999999998743
No 403
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.70 E-value=4.5e-08 Score=72.68 Aligned_cols=63 Identities=10% Similarity=0.093 Sum_probs=44.1
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .+.|.|++.+ |..+. ..++...... +++|.|.++..+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D 90 (225)
T 1op3_H 17 SLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE------D 90 (225)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred CEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh------h
Confidence 399999999988 7999998754 32211 0112222221 248999988765 8
Q ss_pred CeEEEEEEEcCCC
Q psy5697 116 STVYRCRASNEAG 128 (145)
Q Consensus 116 ~G~Y~C~A~N~~G 128 (145)
+|.|.|.+.|..|
T Consensus 91 ~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 91 TAIYYCARKGSDR 103 (225)
T ss_dssp CEEEEEEEECCSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999999976
No 404
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.69 E-value=1.2e-08 Score=78.68 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=49.2
Q ss_pred CCCEEEEcCCCCC--ccCeEEEeeEeccCCCEEEEEccCCeEeeccc---CceEEeeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 45 HYPFRIKSAPGGN--RTRGLELTRQTRYEPSQLGWRFSNNTVIAYVK---DLRIALSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 45 ~~P~~i~~p~~~~--~~g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~---~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
.+|.|...|...+ +..++|.|.+.+ +.+.|.|+| ||..+.... .......+++|.|.++..+ |+|.|
T Consensus 6 ~kP~i~~~P~~~V~~G~~VtL~C~~~~-~~~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y 77 (257)
T 1b6u_A 6 RKPSLLAHPGPLVKSEETVILQCWSDV-RFQHFLLHR-EGKFKDTLHLIGEHHDGVSKANFSIGPMMQD------LAGTY 77 (257)
T ss_dssp CCCEECCBSCSEEESSCCEEEEEEESS-CCSEEEEEE-ESTTCEEEEEECBCCTTCEEEEEEECSCCTT------TCEEE
T ss_pred CCCEEEEcCCCEecCCCCEEEEEecCC-CCcEEEEEE-CCCCCCcceeeeeccCCCceEEEEeecCCcc------cCEEE
Confidence 3567766665422 233999999986 678999985 554432110 0000123568999888765 89999
Q ss_pred EEEEEcCC
Q psy5697 120 RCRASNEA 127 (145)
Q Consensus 120 ~C~A~N~~ 127 (145)
+|.|.|..
T Consensus 78 ~C~a~~~~ 85 (257)
T 1b6u_A 78 RCYGSVTH 85 (257)
T ss_dssp EEEEECSS
T ss_pred EEeEeccC
Confidence 99999763
No 405
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.68 E-value=5e-08 Score=72.73 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=43.4
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee-----c-----------ccCceEEe-----eCCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA-----Y-----------VKDLRIAL-----SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~-----~-----------~~~~~~~~-----~~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .+.|.|++.+ |..+. . .++..... .+++|.|.+++.+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D 90 (227)
T 1mju_H 17 SVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSD------D 90 (227)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG------G
T ss_pred CEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcc------c
Confidence 399999999988 7999998754 32211 0 11222222 1248999988765 8
Q ss_pred CeEEEEEEEcCCC
Q psy5697 116 STVYRCRASNEAG 128 (145)
Q Consensus 116 ~G~Y~C~A~N~~G 128 (145)
+|.|.|.+.|..+
T Consensus 91 ~G~Y~C~~~~~~~ 103 (227)
T 1mju_H 91 SAVYYCANKLGWF 103 (227)
T ss_dssp CEEEEEEEEETTE
T ss_pred CEEEEEEECCCCc
Confidence 9999999999743
No 406
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.68 E-value=1.3e-07 Score=64.44 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=43.2
Q ss_pred CeEEEeeEeccCCC----EEEEEccC---------------CeEeec---ccCceEEeeC--------------CcEEEc
Q psy5697 60 RGLELTRQTRYEPS----QLGWRFSN---------------NTVIAY---VKDLRIALSN--------------GSLMFP 103 (145)
Q Consensus 60 g~~L~C~a~G~P~P----~i~W~~~d---------------g~~i~~---~~~~~~~~~~--------------GsL~i~ 103 (145)
.+.|.|...+.+.+ .|.|++.+ |..+.. ..+......+ .+|.|.
T Consensus 19 ~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~~sL~I~ 98 (128)
T 3r0n_A 19 TVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATLALH 98 (128)
T ss_dssp CEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSBCCEEEC
T ss_pred CEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCCeEEEEc
Confidence 39999999998877 89998742 222211 1112222222 289999
Q ss_pred CCCCCCCCCCCCCeEEEEEEEc-CCCce
Q psy5697 104 PFPETGFRPDVHSTVYRCRASN-EAGVI 130 (145)
Q Consensus 104 ~~~~~~~~~~~d~G~Y~C~A~N-~~G~~ 130 (145)
+++.+ |+|.|.|.+.+ ..|..
T Consensus 99 ~v~~~------D~G~Y~C~v~~~~~g~~ 120 (128)
T 3r0n_A 99 GLTVE------DEGNYTCEFATFPKGSV 120 (128)
T ss_dssp SCCGG------GCEEEEEEEEEETTEEE
T ss_pred cCCch------hCeEEEEEEEeCCCCCc
Confidence 98766 89999997654 56765
No 407
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.67 E-value=3.7e-08 Score=72.28 Aligned_cols=66 Identities=14% Similarity=0.150 Sum_probs=44.1
Q ss_pred eEEEeeEeccCC--C--EEEEEccCCeEeeccc-CceEEeeCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 61 GLELTRQTRYEP--S--QLGWRFSNNTVIAYVK-DLRIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 61 ~~L~C~a~G~P~--P--~i~W~~~dg~~i~~~~-~~~~~~~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+.|.|.+.|.|+ | .|+|++ ||.++.... .......+|++.+.. +...+ ..|+|.|+|.|.|..|..
T Consensus 21 v~L~C~~~g~~p~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d---~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 21 PEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQD---WLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CEEEEEEEEECSSSCCCEEEEEE-TTEEECCCEECCCEECTTSCEEEEEEEECCHHH---HHTTCCEEEEEECTTSSS
T ss_pred eEEEEEEecccCCCCCeEEEEEE-CCccccCcccCCceeccCCcEEEEEEEEEEHHH---ccCCceEEEEEEcCcCCc
Confidence 999999999874 4 999985 777664321 112345567766643 22221 114999999999998875
No 408
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.67 E-value=3.3e-08 Score=76.04 Aligned_cols=112 Identities=13% Similarity=0.088 Sum_probs=52.0
Q ss_pred eecCceeEeeccccCc-------ccCC-ceeeeEEEe-ccCCCCCCCEEEE-cCCCCCcc--CeEEEeeEecc-CCC-EE
Q psy5697 10 LADADTYIIADRSLFP-------RPLG-YLVGNIVYS-SRSENEHYPFRIK-SAPGGNRT--RGLELTRQTRY-EPS-QL 75 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p-------~~~~-~~~~~~~~~-~~~~~~~~P~~i~-~p~~~~~~--g~~L~C~a~G~-P~P-~i 75 (145)
..|.++|.|....... .... ..+|..+.- .......+|.+.. .|...... .+.|.|.+.|. |.| +|
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v 167 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 167 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEE
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEE
Confidence 6788899988755321 0000 022221111 1111234565543 33322222 38999999996 888 99
Q ss_pred EEEccCCeEeecccCceEEeeCCc------EEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 76 GWRFSNNTVIAYVKDLRIALSNGS------LMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 76 ~W~~~dg~~i~~~~~~~~~~~~Gs------L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+|+ +||..+...........+|+ |.|.+... .| |.|+|.|+|..+.
T Consensus 168 ~W~-k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~------~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 168 SWN-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL------GT-QTYICNVNHKPSN 219 (257)
T ss_dssp EET-TTTCCSSCEECCCEECTTSCEEEEEECCCC--------------CEEEEEEEGGGT
T ss_pred EEe-eCCCcCCcEecCCeEcCCCCEEEEEEEEEccccc------CC-CeEEEEEEecCCC
Confidence 996 57765321111112233443 44433221 15 9999999997554
No 409
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.67 E-value=9.2e-08 Score=65.43 Aligned_cols=62 Identities=8% Similarity=0.063 Sum_probs=41.7
Q ss_pred CeEEEeeEe---ccCCCEEEEEccCCeE----eec------------------------ccCceEEee--CCcEEEcCCC
Q psy5697 60 RGLELTRQT---RYEPSQLGWRFSNNTV----IAY------------------------VKDLRIALS--NGSLMFPPFP 106 (145)
Q Consensus 60 g~~L~C~a~---G~P~P~i~W~~~dg~~----i~~------------------------~~~~~~~~~--~GsL~i~~~~ 106 (145)
.++|.|.+. +.+.+.|.|++.+... +.. ..+...... +++|.|.++.
T Consensus 21 ~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~sL~I~~v~ 100 (135)
T 1xt5_A 21 TVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLTHVH 100 (135)
T ss_dssp CEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTSCCEEECSCC
T ss_pred CEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCCCeEEECCCC
Confidence 399999975 4789999999754221 110 001112222 3689999887
Q ss_pred CCCCCCCCCCeEEEEEEEcCC
Q psy5697 107 ETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 107 ~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
.+ |+|.|.|.+.|..
T Consensus 101 ~~------D~G~Y~C~v~~~~ 115 (135)
T 1xt5_A 101 PQ------DGGRYWCQVAQWS 115 (135)
T ss_dssp GG------GCEEEEEEEECSS
T ss_pred hh------hCcEEEEEEEcCC
Confidence 66 8999999999964
No 410
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.66 E-value=3.8e-08 Score=74.78 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=62.7
Q ss_pred eceee-eecCceeEeeccccCcccCCceeee---EEEeccCCCCCCCEE-EEcCCC-CC--ccCeEEEeeEec-cCCC-E
Q psy5697 5 HISTL-LADADTYIIADRSLFPRPLGYLVGN---IVYSSRSENEHYPFR-IKSAPG-GN--RTRGLELTRQTR-YEPS-Q 74 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~P~~-i~~p~~-~~--~~g~~L~C~a~G-~P~P-~ 74 (145)
+|..+ ..|+++|.|......... ...++. ..+........+|.+ +..|.. .. +..+.|.|.+.| .|.| +
T Consensus 104 ~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 182 (270)
T 3qib_D 104 EIQSSEAGDSALYLCASSLNWSQD-TQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 182 (270)
T ss_dssp EESSCCGGGCEEEEEEEESCTTCC-CCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EECCCCHhHCeEEEEEEecCCCcc-ceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeE
Confidence 33333 678899999875421100 011111 111112223346654 444443 11 233899999999 7777 8
Q ss_pred EEEEccCCeEeecccCce-------EEeeCCc------EEEcCCCCCCCCCCCC-CeEEEEEEEcCCCc
Q psy5697 75 LGWRFSNNTVIAYVKDLR-------IALSNGS------LMFPPFPETGFRPDVH-STVYRCRASNEAGV 129 (145)
Q Consensus 75 i~W~~~dg~~i~~~~~~~-------~~~~~Gs------L~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G~ 129 (145)
|+|++ ||+.+....... ....+|+ |.|.+...+ | .|.|+|.|+|....
T Consensus 183 v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 183 LSWWV-NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ------NPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EEEEE-TTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHH------STTCEEEEEEEECCBC
T ss_pred EEEEE-CCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhc------cCCCeEEEEEEecCCC
Confidence 99974 888875321000 0002343 444433211 4 89999999998653
No 411
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.66 E-value=3.4e-08 Score=73.66 Aligned_cols=63 Identities=16% Similarity=0.166 Sum_probs=43.0
Q ss_pred CeEEEeeEeccCCCEEEEEcc---------------CCeEeecc--cCceEEe--e--CCcEEEcCCCCCCCCCCCCCeE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFS---------------NNTVIAYV--KDLRIAL--S--NGSLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~---------------dg~~i~~~--~~~~~~~--~--~GsL~i~~~~~~~~~~~~d~G~ 118 (145)
.+.|.|.+.|.|.|.|.|++. ++...... ++..... . +.+|.|.++..+ |+|.
T Consensus 18 ~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~------D~G~ 91 (246)
T 4dzb_B 18 SVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE------DSSF 91 (246)
T ss_dssp CEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGG------GCEE
T ss_pred cEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHH------HCEE
Confidence 399999999999999999862 11111110 0111221 1 237999988765 8999
Q ss_pred EEEEEEcCCC
Q psy5697 119 YRCRASNEAG 128 (145)
Q Consensus 119 Y~C~A~N~~G 128 (145)
|.|.|.|..+
T Consensus 92 Y~C~~~~~~~ 101 (246)
T 4dzb_B 92 YICSARTSGD 101 (246)
T ss_dssp EEEEECCSSG
T ss_pred EEEEEecCCC
Confidence 9999998765
No 412
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.65 E-value=1.4e-07 Score=62.78 Aligned_cols=64 Identities=9% Similarity=0.062 Sum_probs=44.5
Q ss_pred eEEEeeEeccCCC-----EEEEEccCCeEee---c-----------ccCceE-EeeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 61 GLELTRQTRYEPS-----QLGWRFSNNTVIA---Y-----------VKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 61 ~~L~C~a~G~P~P-----~i~W~~~dg~~i~---~-----------~~~~~~-~~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
+.|.|...+.|.+ .|.|++.+..++. . ..+... ...+++|.|.+++.+ |+|.|.
T Consensus 12 v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~------D~G~Y~ 85 (110)
T 1ncn_A 12 ADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIK------DKGLYQ 85 (110)
T ss_dssp EEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGG------GCEEEE
T ss_pred EEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChH------HCEEEE
Confidence 9999999887765 4999875432120 0 011112 234579999998766 899999
Q ss_pred EEEEcCCCce
Q psy5697 121 CRASNEAGVI 130 (145)
Q Consensus 121 C~A~N~~G~~ 130 (145)
|.+.|..|..
T Consensus 86 C~v~~~~~~~ 95 (110)
T 1ncn_A 86 CIIHHKKPTG 95 (110)
T ss_dssp EEEEEECSSS
T ss_pred EEEEcCCCCc
Confidence 9999998764
No 413
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.65 E-value=5.8e-08 Score=74.43 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=60.5
Q ss_pred eecCceeEeeccccCc-ccCCceeee---EEEeccCCCCCCCEEEE-cCCC-C--CccCeEEEeeEeccCC--CEEEEEc
Q psy5697 10 LADADTYIIADRSLFP-RPLGYLVGN---IVYSSRSENEHYPFRIK-SAPG-G--NRTRGLELTRQTRYEP--SQLGWRF 79 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p-~~~~~~~~~---~~~~~~~~~~~~P~~i~-~p~~-~--~~~g~~L~C~a~G~P~--P~i~W~~ 79 (145)
..|+++|.|...+... ......++. ..+........+|.+.. .|.. . .+..+.|.|.+.|.++ |+|+|++
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 188 (279)
T 2wbj_D 109 PEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 188 (279)
T ss_dssp GGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEE
T ss_pred ccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEE
Confidence 5788899888765211 000001111 11111111234675544 3433 1 1234899999999844 7999985
Q ss_pred cCCeEeecccCce---E--E--eeCCc------EEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 80 SNNTVIAYVKDLR---I--A--LSNGS------LMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 80 ~dg~~i~~~~~~~---~--~--~~~Gs------L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
||+++....... . + ..+|+ |.|.+.... .+.|.|+|.|+|....
T Consensus 189 -~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~-----d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 189 -NGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQ-----NPRNHFRCQVQFYGLS 245 (279)
T ss_dssp -TTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTT-----CTTCEEEEEEEECCBC
T ss_pred -CCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhc-----cCCCEEEEEEEeCCCC
Confidence 888775321000 0 0 13444 555443221 1467899999998664
No 414
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.65 E-value=6.7e-08 Score=71.11 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=43.1
Q ss_pred eEEEeeEeccC--CCEEEEEccC-CeE---ee---------------cccCceEEee-----CCcEEEcCCCCCCCCCCC
Q psy5697 61 GLELTRQTRYE--PSQLGWRFSN-NTV---IA---------------YVKDLRIALS-----NGSLMFPPFPETGFRPDV 114 (145)
Q Consensus 61 ~~L~C~a~G~P--~P~i~W~~~d-g~~---i~---------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~ 114 (145)
+.|.|.+.|.| .+.|.|++.+ |.. +. ..++...... +++|.|.++..+
T Consensus 18 v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------ 91 (222)
T 1q9r_B 18 LRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAE------ 91 (222)
T ss_dssp EEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG------
T ss_pred EEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCcc------
Confidence 99999999987 7899998743 321 10 0111222222 238999988765
Q ss_pred CCeEEEEEEEcCCC
Q psy5697 115 HSTVYRCRASNEAG 128 (145)
Q Consensus 115 d~G~Y~C~A~N~~G 128 (145)
|+|.|.|.|.|..|
T Consensus 92 D~G~Y~C~~~~~~~ 105 (222)
T 1q9r_B 92 DSATYYCARDHDGY 105 (222)
T ss_dssp GCEEEEEEECCCSS
T ss_pred cCeEEEEEEeccCC
Confidence 89999999999875
No 415
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.65 E-value=3e-08 Score=72.61 Aligned_cols=63 Identities=11% Similarity=0.040 Sum_probs=41.4
Q ss_pred CeEEEeeE-eccC-CCEEEEEccC-CeEee-----------cccCceEEe-eC--CcEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTRQ-TRYE-PSQLGWRFSN-NTVIA-----------YVKDLRIAL-SN--GSLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~a-~G~P-~P~i~W~~~d-g~~i~-----------~~~~~~~~~-~~--GsL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.+.|.|.+ .+.| .|.|+|++.+ |..+. ..+...... .+ .+|.|.++..+ |+|.|+|.
T Consensus 17 ~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~ 90 (216)
T 2xzc_L 17 KVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTG------DEADYYCG 90 (216)
T ss_dssp CEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGG------GCEEEEEE
T ss_pred eEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcc------cCEEEEEE
Confidence 39999995 5543 6899998743 32211 011112222 22 27999988765 89999999
Q ss_pred EEcCCC
Q psy5697 123 ASNEAG 128 (145)
Q Consensus 123 A~N~~G 128 (145)
|.|..|
T Consensus 91 ~~~~~~ 96 (216)
T 2xzc_L 91 TWDSSL 96 (216)
T ss_dssp EECTTS
T ss_pred EEeCCC
Confidence 999987
No 416
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.65 E-value=7.9e-08 Score=71.76 Aligned_cols=62 Identities=15% Similarity=0.018 Sum_probs=42.0
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeEee-------------cc-cCceEEe-e--CCcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTVIA-------------YV-KDLRIAL-S--NGSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~i~-------------~~-~~~~~~~-~--~GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+.|.|.+.|.|.+.|.|++.+ +.... .. .+..... . +.+|.|.+++.+ |+|.|.|
T Consensus 18 ~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~------D~G~Y~C 91 (245)
T 3nfj_J 18 PLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS------DSGFYLC 91 (245)
T ss_dssp CEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG------GCEEEEE
T ss_pred CEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh------hCEEEEE
Confidence 3999999999999999998732 21110 00 1111111 1 237999988766 8999999
Q ss_pred EEEcCC
Q psy5697 122 RASNEA 127 (145)
Q Consensus 122 ~A~N~~ 127 (145)
.|.|..
T Consensus 92 ~~~~~~ 97 (245)
T 3nfj_J 92 AWSVSV 97 (245)
T ss_dssp EEECCT
T ss_pred EEeecc
Confidence 999943
No 417
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.65 E-value=9e-08 Score=70.32 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=44.0
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeE---ee-c--------------ccCceEEe---eCC--cEEEcCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTV---IA-Y--------------VKDLRIAL---SNG--SLMFPPFPETGFRPD 113 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~---i~-~--------------~~~~~~~~---~~G--sL~i~~~~~~~~~~~ 113 (145)
.+.|.|.+.|.| .+.|.|++.+ |.. +. . ..+..... ..+ +|.|.++..+
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~----- 91 (220)
T 1pz5_B 17 SMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAE----- 91 (220)
T ss_dssp CEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG-----
T ss_pred eEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCHH-----
Confidence 399999999987 7999998743 321 10 0 01222222 123 8999988765
Q ss_pred CCCeEEEEEEEcCCCc
Q psy5697 114 VHSTVYRCRASNEAGV 129 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~G~ 129 (145)
|+|.|+|.+.|..|.
T Consensus 92 -D~G~Y~C~~~~~~~~ 106 (220)
T 1pz5_B 92 -DTGIYYCTRGGAVGA 106 (220)
T ss_dssp -GCEEEEEEEECTTSS
T ss_pred -HCEEEEEEEecCCcc
Confidence 899999999998654
No 418
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=1.4e-07 Score=65.36 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=51.2
Q ss_pred CeEEEeeEecc-CCCEEEEEccCCe---Eeeccc-----CceEE-------eeCCcEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 60 RGLELTRQTRY-EPSQLGWRFSNNT---VIAYVK-----DLRIA-------LSNGSLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 60 g~~L~C~a~G~-P~P~i~W~~~dg~---~i~~~~-----~~~~~-------~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
.++|.|.+.+. |.+.|.|++.++. .+.... +.... ..+.+|.|.+++.+ |+|.|.|.+
T Consensus 25 ~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~ 98 (136)
T 2d9c_A 25 SATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA------DAGTYYCVK 98 (136)
T ss_dssp CEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTT------TCEEEEEEE
T ss_pred CEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHH------HCEEEEEEE
Confidence 39999999887 6789999986542 122111 11000 01358999988766 899999999
Q ss_pred EcCCC----ce---EEEEEEEEeccCCC
Q psy5697 124 SNEAG----VI---LSRFVHVKADSRIP 144 (145)
Q Consensus 124 ~N~~G----~~---~s~~v~v~~~~~~p 144 (145)
.|..+ .. ....+.|......|
T Consensus 99 ~~~~~~~~~~~~~g~~t~L~V~~~~s~P 126 (136)
T 2d9c_A 99 FRKGSPDDVEFKSGAGTELSVRAKPSAP 126 (136)
T ss_dssp EECCSSSCEEEEECCCEEEEEECCCCCC
T ss_pred EeCCCCcccceeeCCCeEEEEEeCCCCC
Confidence 98654 11 23567777655555
No 419
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.65 E-value=1.6e-07 Score=70.63 Aligned_cols=76 Identities=8% Similarity=0.040 Sum_probs=47.6
Q ss_pred CCCEEEEcCCC-CCcc--CeEEEeeEecc--CCCEEEEEccC-CeE---ee------------cccCceEEeeC---C--
Q psy5697 45 HYPFRIKSAPG-GNRT--RGLELTRQTRY--EPSQLGWRFSN-NTV---IA------------YVKDLRIALSN---G-- 98 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~--g~~L~C~a~G~--P~P~i~W~~~d-g~~---i~------------~~~~~~~~~~~---G-- 98 (145)
.+++.+.+|+. .+.. .++|.|.+.|. |.+.|.|++.+ +.. +. ..++......+ +
T Consensus 7 ~~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 86 (257)
T 3gkz_A 7 DKEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQV 86 (257)
T ss_dssp --CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEE
T ss_pred CccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceE
Confidence 34566666665 2233 39999999995 48999998743 211 10 01111122211 2
Q ss_pred cEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 99 SLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 99 sL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
+|.|.++..+ |+|.|+|.|.|.
T Consensus 87 ~L~I~~v~~~------DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 87 YLQLKSVSSE------DTATYYCSYFDS 108 (257)
T ss_dssp EEEECSCCGG------GCEEEEEEEECT
T ss_pred EEEECCCChh------hCEEEEEEEecC
Confidence 6999988765 899999999997
No 420
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.64 E-value=8.4e-08 Score=68.22 Aligned_cols=65 Identities=11% Similarity=0.001 Sum_probs=43.4
Q ss_pred eEEEeeEeccCCC--EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy5697 61 GLELTRQTRYEPS--QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P~P--~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
+.|.|.+.|.|.| .++|+ +||..+...... ..+..|.|. . ..|+|.|+|.|.|... .+..+.|.
T Consensus 16 v~l~C~~~~~~~p~~~~~W~-k~~~~l~~~~~~---~~~~~l~i~--~------~~d~G~Y~C~~~n~~~--~~~~l~V~ 81 (184)
T 3b5h_A 16 ILLTCSLNDSATEVTGHRWL-KGGVVLKEDALP---GQKTEFKVD--S------DDQWGEYSCVFLPEPM--GTANIQLH 81 (184)
T ss_dssp EEEEEEEESCSSCCCEEEEE-SSSEEEECTTCC---CSEEEEEEC--G------GGCCEEEEEEEESTTS--CEEEEEEC
T ss_pred EEEEEECCCCCCCceEEEEE-eCCEEeeccccc---CCcEEEEEe--c------hhhCeEEEEEEECCcC--cEEEEEEe
Confidence 8999999999998 99998 488887643211 112245543 2 2289999999999433 34455554
Q ss_pred e
Q psy5697 139 A 139 (145)
Q Consensus 139 ~ 139 (145)
.
T Consensus 82 ~ 82 (184)
T 3b5h_A 82 G 82 (184)
T ss_dssp C
T ss_pred c
Confidence 3
No 421
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.64 E-value=9.7e-08 Score=71.95 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=41.5
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEeeC-----CcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALSN-----GSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~~-----GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .+.|.|++.+ +..+. ..++......+ .+|.|.++..+ |
T Consensus 19 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~------D 92 (256)
T 3umt_A 19 SVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE------D 92 (256)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG------G
T ss_pred CEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc------c
Confidence 399999999987 7999998632 32211 01111222221 24999988765 8
Q ss_pred CeEEEEEEEcC
Q psy5697 116 STVYRCRASNE 126 (145)
Q Consensus 116 ~G~Y~C~A~N~ 126 (145)
+|.|.|.|.|.
T Consensus 93 sG~Y~C~~~~~ 103 (256)
T 3umt_A 93 SAVYYCARDDR 103 (256)
T ss_dssp CEEEEEEECCS
T ss_pred CEEEEEEEccC
Confidence 99999999998
No 422
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.63 E-value=4.8e-08 Score=72.96 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=59.0
Q ss_pred eecCceeEeeccccCc-ccCCceeee---EEEeccCCCCCCCEEE-EcCCCC-C--ccCeEEEeeEecc-CCC-EEEEEc
Q psy5697 10 LADADTYIIADRSLFP-RPLGYLVGN---IVYSSRSENEHYPFRI-KSAPGG-N--RTRGLELTRQTRY-EPS-QLGWRF 79 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p-~~~~~~~~~---~~~~~~~~~~~~P~~i-~~p~~~-~--~~g~~L~C~a~G~-P~P-~i~W~~ 79 (145)
..|+++|.|....... ......++. ..+........+|.+. ..|... . +..+.|.|.+.|. |+| +|+|+
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~- 161 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWW- 161 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE-
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEE-
Confidence 6788999998865100 000001111 1111111233466554 444331 1 2238999999995 545 78997
Q ss_pred cCCeEeecccCce--EE-----eeCC------cEEEcCCCCCCCCCCCC-CeEEEEEEEcCCCc
Q psy5697 80 SNNTVIAYVKDLR--IA-----LSNG------SLMFPPFPETGFRPDVH-STVYRCRASNEAGV 129 (145)
Q Consensus 80 ~dg~~i~~~~~~~--~~-----~~~G------sL~i~~~~~~~~~~~~d-~G~Y~C~A~N~~G~ 129 (145)
+||..+....... .. ..+| .|.|.+.... | .|.|+|.|+|....
T Consensus 162 k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ------NPRNHFRCQVQFYGLS 219 (245)
T ss_dssp ETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHT------CTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhc------cCCCeEEEEEEECCCC
Confidence 5888875321000 00 0234 3455433221 4 66999999998654
No 423
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.63 E-value=7.9e-08 Score=72.30 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=46.3
Q ss_pred CCCCCEEEEcCCC-CCccC--eEEEeeEec-cCCC-EEEEEccCCeEeecccCceEEeeCC------cEEEcCCCCCCCC
Q psy5697 43 NEHYPFRIKSAPG-GNRTR--GLELTRQTR-YEPS-QLGWRFSNNTVIAYVKDLRIALSNG------SLMFPPFPETGFR 111 (145)
Q Consensus 43 ~~~~P~~i~~p~~-~~~~g--~~L~C~a~G-~P~P-~i~W~~~dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~ 111 (145)
...+|.+...++. ....| +.|.|.+.| .|+| .++|+ ++|..+...........+| +|.|.+...
T Consensus 137 ~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~-~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~---- 211 (239)
T 3tv3_H 137 STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL---- 211 (239)
T ss_dssp CCBCCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEG-GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGT----
T ss_pred CCcCCEEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEE-ECCccCceEecCceECCCCCEEEEEEEEEchhhc----
Confidence 3456766644443 22223 899999998 5545 48896 4665332111111222234 466655432
Q ss_pred CCCCCeEEEEEEEcCCCce
Q psy5697 112 PDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 112 ~~~d~G~Y~C~A~N~~G~~ 130 (145)
.| |.|.|.|+|..+..
T Consensus 212 --~~-~~ytC~v~h~~~~~ 227 (239)
T 3tv3_H 212 --GT-QTYICNVNHKPSNT 227 (239)
T ss_dssp --TT-CCCEEEEEEGGGTE
T ss_pred --CC-CEEEEEEEECCCCc
Confidence 26 99999999998765
No 424
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.63 E-value=4.7e-08 Score=67.26 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=42.3
Q ss_pred CeEEEeeEecc-CCCEEEEEccCCe---Eeeccc-----CceE----E---eeCCcEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 60 RGLELTRQTRY-EPSQLGWRFSNNT---VIAYVK-----DLRI----A---LSNGSLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 60 g~~L~C~a~G~-P~P~i~W~~~dg~---~i~~~~-----~~~~----~---~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
.++|.|.+.|. |.+.|.|++.++. .+.... +... . ..+.+|.|.++..+ |+|.|.|.+
T Consensus 20 ~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~ 93 (127)
T 2jju_A 20 SATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA------DAGTYYCVK 93 (127)
T ss_dssp CEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGG------GCEEEEEEE
T ss_pred CEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHH------HCEEEEEEE
Confidence 39999999887 7789999975532 122111 1111 0 12458999988765 899999999
Q ss_pred EcCC
Q psy5697 124 SNEA 127 (145)
Q Consensus 124 ~N~~ 127 (145)
.|.-
T Consensus 94 ~~~~ 97 (127)
T 2jju_A 94 FRKG 97 (127)
T ss_dssp EECC
T ss_pred EcCC
Confidence 9863
No 425
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.62 E-value=3.8e-08 Score=73.24 Aligned_cols=63 Identities=8% Similarity=0.040 Sum_probs=43.9
Q ss_pred CeEEEeeEeccCC----CEEEEEccC-CeEe---ec------------ccCceEEee-----CCcEEEcCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEP----SQLGWRFSN-NTVI---AY------------VKDLRIALS-----NGSLMFPPFPETGFRPDV 114 (145)
Q Consensus 60 g~~L~C~a~G~P~----P~i~W~~~d-g~~i---~~------------~~~~~~~~~-----~GsL~i~~~~~~~~~~~~ 114 (145)
.++|.|.+.|.|. +.|.|++.+ |..+ .. .++...... +++|.|.++..+
T Consensus 17 ~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------ 90 (228)
T 3bae_H 17 TLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTA------ 90 (228)
T ss_dssp CEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGG------
T ss_pred eEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcc------
Confidence 3999999999986 999998643 3221 10 111222221 248999988765
Q ss_pred CCeEEEEEEEcCCC
Q psy5697 115 HSTVYRCRASNEAG 128 (145)
Q Consensus 115 d~G~Y~C~A~N~~G 128 (145)
|+|.|.|.+.|..|
T Consensus 91 D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 91 DTATYYCARRGFYG 104 (228)
T ss_dssp GCEEEEEEEEEEST
T ss_pred cCEEEEEEEecCCC
Confidence 89999999999876
No 426
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.62 E-value=1.9e-07 Score=69.87 Aligned_cols=115 Identities=11% Similarity=0.056 Sum_probs=61.0
Q ss_pred eecCceeEeeccccCcccCCceeee---EEEeccCCCCCCCEEE-EcCCC-CC--ccCeEEEeeEecc-CCC-EEEEEcc
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGN---IVYSSRSENEHYPFRI-KSAPG-GN--RTRGLELTRQTRY-EPS-QLGWRFS 80 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~P~~i-~~p~~-~~--~~g~~L~C~a~G~-P~P-~i~W~~~ 80 (145)
..|+++|.|.............++. ..+........+|.+. ..|.. .. +..+.|.|.+.|. |+| +|+|++
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~- 159 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV- 159 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE-
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEE-
Confidence 6788899998765421000001111 1111111123467554 44543 22 2348999999996 755 999975
Q ss_pred CCeEeecccC---ceEEeeCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 81 NNTVIAYVKD---LRIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 81 dg~~i~~~~~---~~~~~~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
||..+..... ......+|++.+.. +...+ ...+.|.|+|.|+|..
T Consensus 160 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~--~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 160 NGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATF--WHNPRNHFRCQVQFHG 210 (238)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEECCCHHH--HTCTTCEEEEEEEECC
T ss_pred CCEECCCceecccceEeCCCCCEEEEEEEEEcHHH--hccCCCeEEEEEEcCC
Confidence 8888753211 11223566654422 22110 0113678999999984
No 427
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.62 E-value=1.2e-07 Score=63.73 Aligned_cols=73 Identities=14% Similarity=0.259 Sum_probs=43.7
Q ss_pred CeEEEeeEec----cCCCEEEEEccCC--e-E--ee-c------------ccCceEEe-----eCCcEEEcCCCCCCCCC
Q psy5697 60 RGLELTRQTR----YEPSQLGWRFSNN--T-V--IA-Y------------VKDLRIAL-----SNGSLMFPPFPETGFRP 112 (145)
Q Consensus 60 g~~L~C~a~G----~P~P~i~W~~~dg--~-~--i~-~------------~~~~~~~~-----~~GsL~i~~~~~~~~~~ 112 (145)
.+.|.|...+ .+.+.|.|++.+. . . +. . .++..... .+++|.|.+++.+
T Consensus 16 ~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~---- 91 (124)
T 1neu_A 16 QVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYS---- 91 (124)
T ss_dssp CEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCCGG----
T ss_pred eEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCChh----
Confidence 3999999864 3578999986432 1 1 11 0 01111221 2468999988766
Q ss_pred CCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 113 DVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 113 ~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|+|.|.|.+.|..|.. .+..++|.
T Consensus 92 --D~G~Y~C~v~~~~~~~~~~~~v~L~ 116 (124)
T 1neu_A 92 --DNGTFTCDVKNPPDIVGKTSQVTLY 116 (124)
T ss_dssp --GCEEEEEEEEC----CCEEEEEEEE
T ss_pred --hCEEEEEEEEcCCCCcCcEeeEEEE
Confidence 8999999999998763 34444444
No 428
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.62 E-value=1.3e-07 Score=71.09 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=43.9
Q ss_pred CeEEEeeEecc-CC-CEEEEEccCCe-EeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRY-EP-SQLGWRFSNNT-VIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~-P~-P~i~W~~~dg~-~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.|. |. |+|+|++ ||. .+...........+| +|.|.+.. .+ |.|+|.|.|..|..
T Consensus 149 ~v~L~C~~~g~~P~~~~v~W~~-~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~-------~~-g~y~C~v~n~~~~~ 219 (242)
T 1hxm_B 149 AGTYLCLLEKFFPDVIKIHWEE-KKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKS-------LD-KEHRCIVRHENNKN 219 (242)
T ss_dssp CEEEEEEEEEESSCCEEEEEEE-SSSCCCCCCEECCCEECSSSEEEEEEEEECTGG-------GG-SCEEEEEEETTSGG
T ss_pred CceEEEEEeeEECCCeEEEEEc-CCCEeecCccccceecCCCcEEEEEEEEEcccc-------CC-CEEEEEEEeCCCCC
Confidence 38999999997 64 7999985 554 443211000111333 56665331 13 99999999999976
Q ss_pred -EEEEEEE
Q psy5697 131 -LSRFVHV 137 (145)
Q Consensus 131 -~s~~v~v 137 (145)
.+..+.+
T Consensus 220 ~~~~~~~~ 227 (242)
T 1hxm_B 220 GVDQEIIF 227 (242)
T ss_dssp GSCEEEEE
T ss_pred CceeEeec
Confidence 5666655
No 429
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.61 E-value=2.7e-07 Score=63.65 Aligned_cols=72 Identities=14% Similarity=0.100 Sum_probs=46.2
Q ss_pred CeEEEeeEeccCCC---EEEEEccCCe----------Eeec-----ccCceEEee------CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEPS---QLGWRFSNNT----------VIAY-----VKDLRIALS------NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P~P---~i~W~~~dg~----------~i~~-----~~~~~~~~~------~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|..+..+.+ .|.|+|.+.. .... ..+...... +.+|.|.+++.+ |
T Consensus 22 ~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~------D 95 (125)
T 4gos_A 22 DGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLT------D 95 (125)
T ss_dssp CEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGG------G
T ss_pred CEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChH------H
Confidence 39999998755443 6999874321 1110 111112221 238999998766 8
Q ss_pred CeEEEEEEEcCCCceEEEEEEEE
Q psy5697 116 STVYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
+|.|+|.+.|..|.. ...+.|+
T Consensus 96 ~G~Y~C~v~~~~g~~-~~~v~Lk 117 (125)
T 4gos_A 96 AGTYKCYIITSKGKG-NANLEYK 117 (125)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEE
T ss_pred CEEEEEEEEeCCCeE-EEEEEEE
Confidence 999999999999886 3445444
No 430
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.61 E-value=1.3e-07 Score=71.18 Aligned_cols=76 Identities=11% Similarity=0.165 Sum_probs=48.4
Q ss_pred CCCEEEEcCCC-CCcc--CeEEEeeEecc--CCCEEEEEccC-CeEee----c------------ccCceEEee---CC-
Q psy5697 45 HYPFRIKSAPG-GNRT--RGLELTRQTRY--EPSQLGWRFSN-NTVIA----Y------------VKDLRIALS---NG- 98 (145)
Q Consensus 45 ~~P~~i~~p~~-~~~~--g~~L~C~a~G~--P~P~i~W~~~d-g~~i~----~------------~~~~~~~~~---~G- 98 (145)
.+|.+...+.. ++.. .++|.|.+.|. |.|.|.|++.+ +..+. . .++...... .+
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 45677777776 2333 39999999994 78999998632 22110 0 011122221 12
Q ss_pred -cEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 99 -SLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 99 -sL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
+|.|.++..+ |+|.|.|.|.|.
T Consensus 85 ~~L~I~~v~~~------DsG~Y~C~~~~~ 107 (256)
T 3juy_B 85 AYMELRSLRSA------DTAVYYCARVGE 107 (256)
T ss_dssp EEEEECSCCGG------GCEEEEEEECCC
T ss_pred EEEEECCCCcc------cCEEEEEeEEec
Confidence 5999988765 899999999997
No 431
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.61 E-value=1.6e-07 Score=63.05 Aligned_cols=61 Identities=13% Similarity=0.169 Sum_probs=42.1
Q ss_pred eEEEeeEeccCCCEEEEEccC-Ce---Eeec--------ccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeEEEEEEEc
Q psy5697 61 GLELTRQTRYEPSQLGWRFSN-NT---VIAY--------VKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRCRASN 125 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~d-g~---~i~~--------~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~N 125 (145)
++|.|.+.+.+.+.+.|++.+ |. .+.. .++.... ..++ +|.|.++..+ |+|.|.|.+.|
T Consensus 22 v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~~ 95 (111)
T 1i3g_L 22 VSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSE------DLADYFCQQYS 95 (111)
T ss_dssp EEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCSEEEEEECS
T ss_pred EEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHH------HCEEEEEEEec
Confidence 999999999999999998754 22 1210 1111111 2223 7999988765 89999999998
Q ss_pred CC
Q psy5697 126 EA 127 (145)
Q Consensus 126 ~~ 127 (145)
..
T Consensus 96 ~~ 97 (111)
T 1i3g_L 96 SY 97 (111)
T ss_dssp SS
T ss_pred CC
Confidence 73
No 432
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.61 E-value=2.7e-08 Score=86.78 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=51.7
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc-----e-EEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV-----I-LSRF 134 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~-----~-~s~~ 134 (145)
+.|+|.+.| |.|+|+|++ +|.++......+....++.|.|..+..+ |+|.|+|.|+|..|. . ....
T Consensus 551 ~~L~C~~~s-p~a~v~W~~-~~~~l~~~~~~~~~~~~~~LlI~~v~~~------DsG~Y~C~A~e~~~~~~~~~~~~~~~ 622 (663)
T 1olz_A 551 AELKCSQKS-NLARVFWKF-QNGVLKAESPKYGLMGRKNLLIFNLSEG------DSGVYQCLSEERVKNKTVFQVVAKHV 622 (663)
T ss_dssp EEECCCCSC-TTCEEEEEE-SSSBCCCCSSSBCCTTTTCEEECSCCGG------GCEEEEEEEEEECSSSEEEEEEEEEE
T ss_pred EEEEccCCC-CCCcEEEEE-CCeeccccCcceEEecCCeEEEEecCcc------cCeEEEEEEEECccCCCceEEEEEEE
Confidence 899999999 999999985 6666653332333345789999887654 899999999999522 2 3335
Q ss_pred EEEEeccCC
Q psy5697 135 VHVKADSRI 143 (145)
Q Consensus 135 v~v~~~~~~ 143 (145)
+.|..++++
T Consensus 623 l~V~v~P~~ 631 (663)
T 1olz_A 623 LEVKVVPKP 631 (663)
T ss_dssp EEEEC----
T ss_pred EEEEeCCcc
Confidence 566655554
No 433
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.60 E-value=7e-08 Score=71.19 Aligned_cols=62 Identities=16% Similarity=0.056 Sum_probs=42.4
Q ss_pred eEEEeeEeccCC-C-EEEEEccC-CeEe---e--------cccCceEE-eeC--CcEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 61 GLELTRQTRYEP-S-QLGWRFSN-NTVI---A--------YVKDLRIA-LSN--GSLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 61 ~~L~C~a~G~P~-P-~i~W~~~d-g~~i---~--------~~~~~~~~-~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
+.|.|.+.|.|+ + .|+|++.+ |..+ . ..+..... ..+ ++|.|.++..+ |+|.|+|.|
T Consensus 37 v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~ 110 (234)
T 2j6e_L 37 VTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSE------DEADYYCAT 110 (234)
T ss_dssp EEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCST------TCSEEEEEE
T ss_pred EEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHH------HCEEEEEEE
Confidence 899999999764 5 79998743 3221 0 01111122 122 38999988765 899999999
Q ss_pred EcCCC
Q psy5697 124 SNEAG 128 (145)
Q Consensus 124 ~N~~G 128 (145)
.|..|
T Consensus 111 ~~~~~ 115 (234)
T 2j6e_L 111 WDDSL 115 (234)
T ss_dssp EETTT
T ss_pred EcCCc
Confidence 99988
No 434
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.59 E-value=2.7e-07 Score=68.08 Aligned_cols=110 Identities=12% Similarity=0.081 Sum_probs=62.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEE-EcCCC-CCccC--eEEEeeEecc-CC-CEEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRI-KSAPG-GNRTR--GLELTRQTRY-EP-SQLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i-~~p~~-~~~~g--~~L~C~a~G~-P~-P~i~W~~~dg~ 83 (145)
..|.+.|.|......-.. ..... + .. .....+|.+. ..+.. ....| +.|.|.|.|. |+ ++|+|+ +||.
T Consensus 75 ~~D~g~Y~C~~~~~~~~~--~~~~~-i-~~-~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~-k~g~ 148 (214)
T 1ow0_A 75 WNHGKTFTCTAAYPESKT--PLTAT-L-SK-SGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWL-QGSQ 148 (214)
T ss_dssp HHHTCEEEEEECCSSCSS--CEEEE-E-EC-CSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEE-ETTE
T ss_pred cCCCCeEEEEEecCCCCC--ceeEe-e-cc-CCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEE-ECCE
Confidence 357889999876532111 11111 1 11 2345677654 44433 22233 8999999996 53 499997 5888
Q ss_pred EeecccCc---eEEe---eCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 84 VIAYVKDL---RIAL---SNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 84 ~i~~~~~~---~~~~---~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
.+...... .... .+|++.+.. +...+ ..+.|.|+|.|+|..-
T Consensus 149 ~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~---~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 149 ELPREKYLTWASRQEPSQGTTTFAVTSILRVAAED---WKKGDTFSCMVGHEAL 199 (214)
T ss_dssp ECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHH---HHHTCCEEEEEECTTC
T ss_pred ECCCCceeecCCcccccCCCCcEEEEEEEEECHHH---ccCCCEEEEEEECCCC
Confidence 87643111 1334 567666542 22210 0137899999999864
No 435
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.59 E-value=1.8e-07 Score=69.19 Aligned_cols=64 Identities=8% Similarity=0.043 Sum_probs=43.8
Q ss_pred CeEEEeeEecc-CC-CEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRY-EP-SQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~-P~-P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
++.|.|.+.|. |. |+|+|++ | ..+...........+|++.+.+... ..|.|.|.|.|+|..+.+
T Consensus 134 ~~~l~C~~~g~~P~~~~v~W~~-~-~~l~~~~~~~~~~~~g~y~~~~~~~-----~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 134 GTNVACLVKDFYPKEVTISLRS-S-KKIVEFDPAIVISPSGKYSAVKLGQ-----YGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp TTEEEEEEEEESSSCCEEEEEC-S-SEEEECCCEEEECTTSSEEEEECEE-----ESSTTTCEEEEEETTEEE
T ss_pred CCeEEEEEeeEeCCCeEEEEec-C-CcccCCccceEEcCCCcEEEEEeec-----ccCCCcEEEEEEECCccE
Confidence 37999999986 44 7999975 5 5665432222335678777754321 126899999999998865
No 436
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.59 E-value=2.7e-08 Score=72.74 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=43.1
Q ss_pred CeEEEeeEeccCC-----CEEEEEccCCeE-ee----------cccCceEEee------CCcEEEcCCCCCCCCCCCCCe
Q psy5697 60 RGLELTRQTRYEP-----SQLGWRFSNNTV-IA----------YVKDLRIALS------NGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 60 g~~L~C~a~G~P~-----P~i~W~~~dg~~-i~----------~~~~~~~~~~------~GsL~i~~~~~~~~~~~~d~G 117 (145)
.+.|.|.+.|.|. +.|+|++.+... +. ...+...... +++|.|.++..+ |+|
T Consensus 12 ~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~------D~G 85 (222)
T 4i0k_A 12 DATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT------DEG 85 (222)
T ss_dssp CEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG------GCS
T ss_pred CeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc------cCE
Confidence 3999999999876 899998754322 11 1111122222 568999988765 899
Q ss_pred EEEEEEEcCC
Q psy5697 118 VYRCRASNEA 127 (145)
Q Consensus 118 ~Y~C~A~N~~ 127 (145)
.|+|.+.|..
T Consensus 86 ~Y~C~~~~~~ 95 (222)
T 4i0k_A 86 SYTCFVSIQD 95 (222)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEeCC
Confidence 9999999863
No 437
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.59 E-value=1.5e-07 Score=64.52 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=51.0
Q ss_pred eEEEeeE-eccCCCEEEEEccCCeEeec------------ccCceEEe-eCCcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 61 GLELTRQ-TRYEPSQLGWRFSNNTVIAY------------VKDLRIAL-SNGSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 61 ~~L~C~a-~G~P~P~i~W~~~dg~~i~~------------~~~~~~~~-~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
++|.|.. ...+.+.|.|++.+...+.. ..+..... .+|+|.|.+++.+ |+|.|.|...|.
T Consensus 22 VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~------DsG~Y~c~v~~~ 95 (121)
T 2edo_A 22 VTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKE------DNSTYIMRVLKK 95 (121)
T ss_dssp EEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGG------GCSEEEEEEEET
T ss_pred EEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHH------HCeEEEEEEEcC
Confidence 9999987 45567899999754322211 11112333 6789999998766 899999999988
Q ss_pred CCceEEE--EEEEEeccCCC
Q psy5697 127 AGVILSR--FVHVKADSRIP 144 (145)
Q Consensus 127 ~G~~~s~--~v~v~~~~~~p 144 (145)
.+..... .++|.+...-|
T Consensus 96 ~~~~~~~~~~L~V~~~~~~P 115 (121)
T 2edo_A 96 TGNEQEWKIKLQVLDPVPKP 115 (121)
T ss_dssp TTEEEECCEECEEECCSCCC
T ss_pred CCcEEEEEEEEEEECCCCCC
Confidence 7654444 44444443333
No 438
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.59 E-value=3.1e-07 Score=60.23 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=45.8
Q ss_pred CeEEEeeEeccCCC---EEEEEccCC--------------eEeec-ccCceEEe-----eCCcEEEcCCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYEPS---QLGWRFSNN--------------TVIAY-VKDLRIAL-----SNGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 60 g~~L~C~a~G~P~P---~i~W~~~dg--------------~~i~~-~~~~~~~~-----~~GsL~i~~~~~~~~~~~~d~ 116 (145)
.+.|.|...+.+.+ .|.|++.+. ..+.. ..+..... .+.+|.|.+++.+ |+
T Consensus 11 ~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~------D~ 84 (109)
T 2oyp_A 11 NAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLD------DH 84 (109)
T ss_dssp CEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGG------GC
T ss_pred CEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCCh------hC
Confidence 39999999887644 499987431 11110 11111221 1258999988766 89
Q ss_pred eEEEEEEEcCCCce-EEEEEEEE
Q psy5697 117 TVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 117 G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
|.|.|.+.|..|.. .+..+.|.
T Consensus 85 G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 85 GTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp EEEEEEECCSSTTCCEEEEEEEE
T ss_pred eEEEEEEEcCCcccceEEEEEEE
Confidence 99999999987654 33444443
No 439
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.59 E-value=8.7e-08 Score=70.71 Aligned_cols=53 Identities=13% Similarity=0.317 Sum_probs=41.7
Q ss_pred eEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 61 GLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
+.|.|.+ |.|+|+|+ +||..+... ...+++|.|.++..+ |+|.|+|.|.|...
T Consensus 21 v~L~C~~---p~~~i~W~-k~g~~l~~~-----~~~~~~L~i~~v~~~------DsG~Y~C~~~~~~s 73 (204)
T 1sy6_A 21 VLLTCDA---EAKNITWF-KDGKMIGFL-----TEDKKKWNLGSNAKD------PRGMYQCKGSQNKS 73 (204)
T ss_dssp EEEEECS---CSSEEEEE-ETTEEEEEE-----ESSCCCEEEEEGGGC------CEEEEEEESSSSCC
T ss_pred EEEEEcC---CCCEEEEE-ECCEECCCC-----CCCCCeEEeCCCCcC------CCEEEEEEecCCCC
Confidence 8999998 89999998 488877532 124678999988765 89999999877543
No 440
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.58 E-value=2.2e-07 Score=68.79 Aligned_cols=64 Identities=14% Similarity=0.143 Sum_probs=43.8
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeE---ee-c------------ccCceEEee---C--CcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTV---IA-Y------------VKDLRIALS---N--GSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~---i~-~------------~~~~~~~~~---~--GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .+.|.|++.+ |.. +. . .++...... . .+|.|.++..+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D 90 (220)
T 2fbj_H 17 SLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE------D 90 (220)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG------G
T ss_pred cEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChh------h
Confidence 399999999987 7899998743 321 11 0 112222222 2 38999988765 8
Q ss_pred CeEEEEEEEcCCCc
Q psy5697 116 STVYRCRASNEAGV 129 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~ 129 (145)
+|.|.|.+.|..+.
T Consensus 91 sG~Y~C~~~~~~~~ 104 (220)
T 2fbj_H 91 TALYYCARLHYYGY 104 (220)
T ss_dssp CEEEEEEEEETTTE
T ss_pred CEEEEEEEeccccc
Confidence 99999999998653
No 441
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.58 E-value=3.2e-07 Score=68.29 Aligned_cols=60 Identities=18% Similarity=0.035 Sum_probs=40.2
Q ss_pred CeEEEeeEeccCCCEEEEEcc-------------CCeEeecc--c-CceEEee----CCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFS-------------NNTVIAYV--K-DLRIALS----NGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~-------------dg~~i~~~--~-~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
.++|.| +.|.|.+.|.|++. ++...... + +...... +.+|.|.+++.+ |+|.|
T Consensus 19 ~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~------D~G~Y 91 (245)
T 4ei6_B 19 MVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALE------DSAVY 91 (245)
T ss_dssp CEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGG------GCEEE
T ss_pred CEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHh------HCEEE
Confidence 399999 88999999999862 12111111 0 1222222 227999988765 89999
Q ss_pred EEEEEcC
Q psy5697 120 RCRASNE 126 (145)
Q Consensus 120 ~C~A~N~ 126 (145)
.|.|.|.
T Consensus 92 ~C~~~~~ 98 (245)
T 4ei6_B 92 FCASSFW 98 (245)
T ss_dssp EEEEECS
T ss_pred EEEEccC
Confidence 9999964
No 442
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.58 E-value=3.9e-07 Score=62.21 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=44.0
Q ss_pred eEEEeeEeccCC---CEEEEEccCC-e---Eee------------cccCceEEe------eCCcEEEcCCCCCCCCCCCC
Q psy5697 61 GLELTRQTRYEP---SQLGWRFSNN-T---VIA------------YVKDLRIAL------SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 61 ~~L~C~a~G~P~---P~i~W~~~dg-~---~i~------------~~~~~~~~~------~~GsL~i~~~~~~~~~~~~d 115 (145)
++|.|...+.+. +.|.|+|.+. . .+. ..++..... .+.+|.|.+++.+ |
T Consensus 18 v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~------D 91 (123)
T 4gjt_B 18 AKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA------D 91 (123)
T ss_dssp EEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSS------S
T ss_pred EEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChH------H
Confidence 999999988765 4689987431 1 110 001111111 1347999998776 8
Q ss_pred CeEEEEEEEc-CCCceEEEEEEEEe
Q psy5697 116 STVYRCRASN-EAGVILSRFVHVKA 139 (145)
Q Consensus 116 ~G~Y~C~A~N-~~G~~~s~~v~v~~ 139 (145)
+|.|.|.+.+ ..|.. +..+.|..
T Consensus 92 sG~Y~C~v~t~~~g~~-~~~~~L~V 115 (123)
T 4gjt_B 92 EGEYECRVSTFPAGSF-QARLRLRV 115 (123)
T ss_dssp CSEEEEEEEESSSCEE-EEEEEEEC
T ss_pred CEEEEEEEEECCCCeE-EeEEEEEE
Confidence 9999998776 46654 34444443
No 443
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.57 E-value=1.1e-07 Score=71.84 Aligned_cols=117 Identities=12% Similarity=0.095 Sum_probs=62.6
Q ss_pred eeceee-eecCceeEeeccccCc-ccCCceeeeE---EEeccCCCCCCCEEEEcCCC-C-Cc--cCeEEEeeEec-cCCC
Q psy5697 4 FHISTL-LADADTYIIADRSLFP-RPLGYLVGNI---VYSSRSENEHYPFRIKSAPG-G-NR--TRGLELTRQTR-YEPS 73 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p-~~~~~~~~~~---~~~~~~~~~~~P~~i~~p~~-~-~~--~g~~L~C~a~G-~P~P 73 (145)
++|+.+ ..|+++|.|....... ......++.. .+........+|.+...++. . .. ..+.|.|.+.| .|+|
T Consensus 76 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 155 (253)
T 3to4_D 76 LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 155 (253)
T ss_dssp CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCc
Confidence 455555 7899999998753211 0000112111 11112223356755544332 1 11 23899999999 7777
Q ss_pred -EEEEEccCCeEeecccCce--EE-----eeCCc------EEEcCCCCCCCCCCCC-CeEEEEEEEcCC
Q psy5697 74 -QLGWRFSNNTVIAYVKDLR--IA-----LSNGS------LMFPPFPETGFRPDVH-STVYRCRASNEA 127 (145)
Q Consensus 74 -~i~W~~~dg~~i~~~~~~~--~~-----~~~Gs------L~i~~~~~~~~~~~~d-~G~Y~C~A~N~~ 127 (145)
+|+|++ ||+.+....... .. ..+|+ |.|.+.... | .|.|+|.|+|..
T Consensus 156 i~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~------d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 156 VELSWWV-NGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQ------NPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEEEEE-TTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHT------CTTCEEEEEEEECC
T ss_pred EEEEEEE-CCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhc------cCCCEEEEEEEeCC
Confidence 899975 888875321000 00 03453 444332111 3 679999999984
No 444
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.57 E-value=1.3e-07 Score=65.04 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=47.3
Q ss_pred CeEEEeeEeccC----CCEEEEEccC-CeE---eec--------cc-CceEEeeCC--cEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYE----PSQLGWRFSN-NTV---IAY--------VK-DLRIALSNG--SLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P----~P~i~W~~~d-g~~---i~~--------~~-~~~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|.+.+.+ .+.|.|++.+ +.. +-. .+ +.......+ +|.|.+++.+ |+|.|.
T Consensus 18 ~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~------DsG~Y~ 91 (126)
T 4ffy_L 18 RATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETD------DAATYY 91 (126)
T ss_dssp CEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG------GCEEEE
T ss_pred CEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHH------HCEEEE
Confidence 399999999988 6889999743 211 110 01 111112223 7999988765 899999
Q ss_pred EEEEcCCCceE--EEEEEEE
Q psy5697 121 CRASNEAGVIL--SRFVHVK 138 (145)
Q Consensus 121 C~A~N~~G~~~--s~~v~v~ 138 (145)
|.+.|...... ...+.|.
T Consensus 92 C~~~~~~~~~fg~gT~L~V~ 111 (126)
T 4ffy_L 92 CQQNNEDPYTFGGGTKLEIK 111 (126)
T ss_dssp EEECSSSSCEECCCEEEEEE
T ss_pred EEEecCCCcEECCCEEEEEe
Confidence 99999765443 3455555
No 445
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.57 E-value=2.1e-07 Score=69.75 Aligned_cols=108 Identities=9% Similarity=0.038 Sum_probs=58.4
Q ss_pred ecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEE-EcCCCCC-ccC-eEEEeeEecc-C-CCEEEEEccCCeEe
Q psy5697 11 ADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRI-KSAPGGN-RTR-GLELTRQTRY-E-PSQLGWRFSNNTVI 85 (145)
Q Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i-~~p~~~~-~~g-~~L~C~a~G~-P-~P~i~W~~~dg~~i 85 (145)
.|.+.|.|......-. ..+... + ........+|.+. ..|.... ..+ +.|.|.|.|. | .++|+|+ +||+.+
T Consensus 87 ~D~g~Y~C~~~~~~~~--~~~~~~-v-~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~-k~g~~l 161 (231)
T 2w59_A 87 LSGERFTCTVQHEELP--LPLSKS-V-YRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWL-RDHRAV 161 (231)
T ss_dssp HTTCCEEEEEECTTCS--SCEEEE-E-CCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE-ETTEEC
T ss_pred cCCCEEEEEEEcCCCC--CceEEE-E-ecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEE-ECCEEC
Confidence 4667787776543211 112211 1 1111123567544 4444311 123 8999999996 4 3799997 588887
Q ss_pred ecccCce---EEe--------eC-Cc------EEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 86 AYVKDLR---IAL--------SN-GS------LMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 86 ~~~~~~~---~~~--------~~-Gs------L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
....... ... .+ |+ |.|.+... .|.|.|+|.|+|....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~------~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 162 PATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKW------NGGTVFACMAVHEALP 217 (231)
T ss_dssp CGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHH------HTTCCEEEEEECTTST
T ss_pred CCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHc------CCCCcEEEEEEcCCCC
Confidence 6432111 111 34 54 44543221 2589999999999765
No 446
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.57 E-value=1.2e-07 Score=63.52 Aligned_cols=61 Identities=20% Similarity=0.276 Sum_probs=41.4
Q ss_pred CeEEEeeEeccC----CCEEEEEccC-Ce-E--eec--------ccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYE----PSQLGWRFSN-NT-V--IAY--------VKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P----~P~i~W~~~d-g~-~--i~~--------~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|.+.+.+ .+.+.|++.+ |. + +.. .++.... ..++ +|.|.++..+ |+|.|.
T Consensus 18 ~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~------DsG~Y~ 91 (111)
T 1j05_L 18 RATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEAD------DVATYY 91 (111)
T ss_dssp CEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG------GCEEEE
T ss_pred CEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcc------cCEEEE
Confidence 399999999988 6889998753 32 1 110 0111121 2223 7999988765 899999
Q ss_pred EEEEcC
Q psy5697 121 CRASNE 126 (145)
Q Consensus 121 C~A~N~ 126 (145)
|.+.|.
T Consensus 92 C~~~~~ 97 (111)
T 1j05_L 92 CQQTNE 97 (111)
T ss_dssp EEECSS
T ss_pred EEEecC
Confidence 999986
No 447
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.57 E-value=3e-07 Score=69.61 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=62.9
Q ss_pred eecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCC-C--ccCeEEEeeEec-cCC-CEEEEEccCCeE
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGG-N--RTRGLELTRQTR-YEP-SQLGWRFSNNTV 84 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~-~--~~g~~L~C~a~G-~P~-P~i~W~~~dg~~ 84 (145)
..|.+.|.|......... ...+ ..........+|.+...++.. . ...+.|.|.+.| +|+ .+|+|+ +||+.
T Consensus 91 ~~D~g~Y~C~~~~~~~~~--~~~~--~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~-k~g~~ 165 (239)
T 1i1c_A 91 WLNGKTFKCKVNSGAFPA--PIEK--SISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWK-MNGQP 165 (239)
T ss_dssp HHTTCCEEEEEECSSSSS--CEEE--EECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE-ETTEE
T ss_pred ccCCCeEEEEEecccCCC--CcEE--EEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEE-ECCEE
Confidence 447778888775532221 1111 111112445678766555441 1 123899999999 455 389997 58888
Q ss_pred eecccCc-eEEeeCCcEEEcC---CCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 85 IAYVKDL-RIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 85 i~~~~~~-~~~~~~GsL~i~~---~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+...... .....+|++.+.. +...+ ..|.|.|+|.|+|..-.
T Consensus 166 l~~~~~~~~~~~~dgt~~~~s~l~v~~~~---~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 166 QENYKNTPPTMDTDGSYFLYSKLNVKKET---WQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp CSSEEECCCEECTTSCEEEEEEEEEEHHH---HHTTCCEEEEEECTTSG
T ss_pred CCCceecCceECCCCCEEEEEEEEEChhh---cCCCCEEEEEEECCCCC
Confidence 7532111 1234567655432 22110 11589999999999754
No 448
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.57 E-value=1.3e-07 Score=72.37 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=49.0
Q ss_pred CCEEEEcCCC-CC--ccCeEEEeeEeccCCCEEEEEccC-CeE---ee---c----------ccCceEEee----CCcEE
Q psy5697 46 YPFRIKSAPG-GN--RTRGLELTRQTRYEPSQLGWRFSN-NTV---IA---Y----------VKDLRIALS----NGSLM 101 (145)
Q Consensus 46 ~P~~i~~p~~-~~--~~g~~L~C~a~G~P~P~i~W~~~d-g~~---i~---~----------~~~~~~~~~----~GsL~ 101 (145)
.+.+++.|.. .+ +..+.|.|.+.|.|.+.|+|++.+ |.. +. . .++...... +.+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 3455555554 22 233999999999999999998753 221 10 0 111122221 23899
Q ss_pred EcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 102 FPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 102 i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
|.+++.+ |+|.|.|.|.|..
T Consensus 104 I~~v~~~------D~G~Y~C~~~~~~ 123 (279)
T 2wbj_D 104 VTSAHPE------DSSFYICSARDLT 123 (279)
T ss_dssp ESSCCGG------GCEEEEEEEEETT
T ss_pred EccCCcc------CCEEEEEEEcccc
Confidence 9988765 8999999999953
No 449
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.57 E-value=1.6e-07 Score=69.23 Aligned_cols=63 Identities=10% Similarity=0.114 Sum_probs=42.5
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEe---e------------cccCceEEee---CC--cEEEcCCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVI---A------------YVKDLRIALS---NG--SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i---~------------~~~~~~~~~~---~G--sL~i~~~~~~~~~~~~d~ 116 (145)
.+.|.|.+.|.| .+.|.|++.+ |... . ..++...... .+ +|.|.++..+ |+
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D~ 90 (215)
T 1c5d_H 17 TLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTE------DT 90 (215)
T ss_dssp CEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGG------GC
T ss_pred cEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcc------cC
Confidence 399999999986 5899998753 3211 0 0111222221 22 8999988765 89
Q ss_pred eEEEEEEEcCCC
Q psy5697 117 TVYRCRASNEAG 128 (145)
Q Consensus 117 G~Y~C~A~N~~G 128 (145)
|.|.|.+.|..|
T Consensus 91 G~Y~C~~~~~~~ 102 (215)
T 1c5d_H 91 AIYFCTREDGWN 102 (215)
T ss_dssp EEEEEEECCSSS
T ss_pred EEEEEEEecCCc
Confidence 999999999853
No 450
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.57 E-value=1.6e-07 Score=72.09 Aligned_cols=110 Identities=13% Similarity=0.062 Sum_probs=58.3
Q ss_pred eecCceeEeeccccCcccCCceeeeEEE-eccCCCCCCCEEEE-cCCCCCccC--eEEEeeEecc-CCC-EEEEEccCCe
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGNIVY-SSRSENEHYPFRIK-SAPGGNRTR--GLELTRQTRY-EPS-QLGWRFSNNT 83 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~P~~i~-~p~~~~~~g--~~L~C~a~G~-P~P-~i~W~~~dg~ 83 (145)
..|+++|.|......... ..++..+. ........+|.+.. .|......| +.|.|.+.|. |.| +|+|+ +||.
T Consensus 94 ~~DsG~Y~C~~~~~~~~~--~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~-k~g~ 170 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGF--DYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWN-SGSL 170 (261)
T ss_dssp GGGCEEEEEEEECTTSSE--EEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEG-GGTC
T ss_pred cccCeEEEEEEecCCCcc--eEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEe-cCCC
Confidence 678888888875531000 01111110 01111234565554 443322223 8999999985 877 99996 4665
Q ss_pred Eeec--ccCce---EEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 84 VIAY--VKDLR---IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 84 ~i~~--~~~~~---~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
.+.. .+... ......+|.|.+.... | |.|+|.|+|....
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 171 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWP------S-QSITCNVAHPASS 214 (261)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTTTT------T-SCCEEEEEEGGGT
T ss_pred cCceEecCceecCCcEEEEEEEEEeccccC------C-CEEEEEEEECCCC
Confidence 5421 11100 1111236777654322 5 9999999997654
No 451
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.57 E-value=4.1e-08 Score=76.47 Aligned_cols=62 Identities=13% Similarity=0.045 Sum_probs=45.6
Q ss_pred CeEEEeeEecc-----CCCEEEEEccCCeEeecccCceEEeeC----CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 60 RGLELTRQTRY-----EPSQLGWRFSNNTVIAYVKDLRIALSN----GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 60 g~~L~C~a~G~-----P~P~i~W~~~dg~~i~~~~~~~~~~~~----GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
.+.|.|.+.|+ |.|.|.|+ .||..+... ......+ ++|.|.++..+ |+|.|+|.|.|..+.+
T Consensus 17 ~v~l~C~~~~~~~~~~~~~~i~W~-~~g~~l~~~--~~~~~~~~~~~~~L~i~~~~~~------d~g~y~c~~~~~~~~~ 87 (313)
T 2d9q_B 17 PITASCIIKQNCSHLDPEPQILWR-LGAELQPGG--RQQRLSDGTQESIITLPHLNHT------QAFLSCSLNWGNSLQI 87 (313)
T ss_dssp CEEEEECCCTTSCSSCSCSCCEEE-SSSCBCTTC--EECCCSSSCCCEEEEESCCCSS------EEEEEEEEESSSSEEE
T ss_pred CEEEEEEECCCCCCCCcccceEEE-eCCEECCcc--ceEEEecCeEEEEEEEeccCCC------ccceEEeeecCCCcee
Confidence 39999999998 78999997 588776422 1122233 45999888655 7999999998766654
No 452
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.56 E-value=4.9e-08 Score=74.09 Aligned_cols=65 Identities=8% Similarity=0.048 Sum_probs=41.9
Q ss_pred CeEEEeeEeccCCCEEEEEccCCeEeecccCceEEeeC----CcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce--EEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSNNTVIAYVKDLRIALSN----GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--LSR 133 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~dg~~i~~~~~~~~~~~~----GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~--~s~ 133 (145)
.+.|.|.+.|. |+|++ +|..+.. ......+ ++|.|.++..+ |+|.|+|.|.|..|.. .+.
T Consensus 17 ~v~L~C~~~~~----v~W~~-~~~~~~~---~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~~~~~ 82 (289)
T 3mjg_X 17 TFVLTCSGSAP----VVWER-MSQEPPQ---EMAKAQDGTFSSVLTLTNLTGL------DTGEYFCTHNDSRGLETDERK 82 (289)
T ss_dssp CEEEEEEESSC----CEEEB-TTBCCSE---EEEECTTSCEEEEEEECSCCGG------GCEEEEEECCC------CCCE
T ss_pred cEEEEEeccce----EEEEC-CCCCccc---ceeccCCCceeEEEEEccCChh------hCEEEEEEEcccCCCCcCcEE
Confidence 39999999995 99985 6666521 1122222 47999888665 8999999999999873 334
Q ss_pred EEEEE
Q psy5697 134 FVHVK 138 (145)
Q Consensus 134 ~v~v~ 138 (145)
.+.|.
T Consensus 83 ~~~v~ 87 (289)
T 3mjg_X 83 RLYIF 87 (289)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 55554
No 453
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=97.97 E-value=7.9e-09 Score=69.44 Aligned_cols=60 Identities=15% Similarity=0.034 Sum_probs=41.5
Q ss_pred eEEEeeEeccCCCEEEEEccC-CeEee-----------cccCceEEe-----eCCcEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSN-NTVIA-----------YVKDLRIAL-----SNGSLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~d-g~~i~-----------~~~~~~~~~-----~~GsL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
++|.|.+.+.|.+.|.|++.+ |.... ...+..... .+.+|.|.++..+ |+|.|.|.+
T Consensus 17 v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~ 90 (110)
T 1u3h_A 17 AILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPG------DSATYFCAA 90 (110)
Confidence 899999999999999998753 32211 011111111 1348999888765 899999999
Q ss_pred EcC
Q psy5697 124 SNE 126 (145)
Q Consensus 124 ~N~ 126 (145)
.|.
T Consensus 91 ~~~ 93 (110)
T 1u3h_A 91 SAN 93 (110)
Confidence 986
No 454
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.55 E-value=6.4e-08 Score=72.72 Aligned_cols=64 Identities=16% Similarity=0.165 Sum_probs=43.4
Q ss_pred CeEEEeeEecc--CCCEEEEEccC-CeEee---c--------ccCceEEeeC-C--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTRQTRY--EPSQLGWRFSN-NTVIA---Y--------VKDLRIALSN-G--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~a~G~--P~P~i~W~~~d-g~~i~---~--------~~~~~~~~~~-G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.++|.|.+.|. |.|.|.|++.+ +.... . .++......+ + +|.|.++..+ |+|.|.|.
T Consensus 19 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~ 92 (256)
T 3ux9_B 19 RVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSE------DEADYYCQ 92 (256)
T ss_dssp CEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGG------GCEEEEEE
T ss_pred cEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChh------hCEEEEEE
Confidence 39999999998 89999998743 22111 0 1111122222 2 7999988765 89999999
Q ss_pred EEcCCCc
Q psy5697 123 ASNEAGV 129 (145)
Q Consensus 123 A~N~~G~ 129 (145)
|.|..|.
T Consensus 93 ~~~~~~~ 99 (256)
T 3ux9_B 93 VRDNNEN 99 (256)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9997653
No 455
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.55 E-value=3.9e-08 Score=72.25 Aligned_cols=63 Identities=11% Similarity=-0.038 Sum_probs=41.7
Q ss_pred eEEEeeEec-cCCCE----EEEEccCCeEee-----c-------ccCceEEe--------eCCcEEEcCCCCCCCCCCCC
Q psy5697 61 GLELTRQTR-YEPSQ----LGWRFSNNTVIA-----Y-------VKDLRIAL--------SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 61 ~~L~C~a~G-~P~P~----i~W~~~dg~~i~-----~-------~~~~~~~~--------~~GsL~i~~~~~~~~~~~~d 115 (145)
+.|.|.+.+ .|.|. |+|++. +.... . ..+..... .+++|.|.++..+ |
T Consensus 17 v~L~C~~~~~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~------D 89 (221)
T 3eow_R 17 VTLPCYLQVPNMEVTHVSQLTWARH-GESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE------D 89 (221)
T ss_dssp CEEECCCCCCSSSCCCEEEEEECBS-SSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC------C
T ss_pred EEEEeeeccCCCCCccceEEEEEeC-CCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH------H
Confidence 999999954 55554 999864 32110 0 01111222 3668999988766 8
Q ss_pred CeEEEEEEEcCC-Cce
Q psy5697 116 STVYRCRASNEA-GVI 130 (145)
Q Consensus 116 ~G~Y~C~A~N~~-G~~ 130 (145)
+|.|+|.+.|.. |..
T Consensus 90 ~G~Y~C~~~~~~~~~~ 105 (221)
T 3eow_R 90 EGSYTCLFVTFPQGSR 105 (221)
T ss_dssp CSCBEEEEEESSSCSC
T ss_pred CeEEEEEEEeCCCCce
Confidence 999999999987 544
No 456
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.54 E-value=2.2e-07 Score=61.96 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=40.6
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeE----eecccCceEEe--e--CCcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTV----IAYVKDLRIAL--S--NGSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~----i~~~~~~~~~~--~--~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
.++|.|.+.+.+ .+.|.|++.+ |.. +....+..... . +.+|.|.++..+ |+|.|.|.+.|.
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~------DsG~Y~C~~~~~ 88 (108)
T 2coq_A 17 SLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVE------DSGTYKCKAYRR 88 (108)
T ss_dssp CEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEEEEEE
T ss_pred CEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcc------cCEEEEEEEEeC
Confidence 399999998874 6899998753 321 11111221111 1 237999988765 899999999983
No 457
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.54 E-value=3.8e-07 Score=68.10 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=44.4
Q ss_pred CeEEEeeEecc-CC-CEEEEEccCCeEeecccCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-
Q psy5697 60 RGLELTRQTRY-EP-SQLGWRFSNNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI- 130 (145)
Q Consensus 60 g~~L~C~a~G~-P~-P~i~W~~~dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~- 130 (145)
.+.|.|.+.|. |. ++|+|++.||+.+...........+| +|.|.+.. . .|.|+|.|+|..+..
T Consensus 147 ~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~------~--~~~ytC~v~~~~~~~~ 218 (230)
T 1ypz_F 147 TGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERA------M--GKEHRCIVKHENNKGG 218 (230)
T ss_dssp CEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGG------T--TSCEEEEEECSSCTTT
T ss_pred cceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhh------C--CCEEEEEEEECCCCCc
Confidence 38999999987 75 69999865887664211001112344 46664331 1 389999999998754
Q ss_pred EEEEEEE
Q psy5697 131 LSRFVHV 137 (145)
Q Consensus 131 ~s~~v~v 137 (145)
.+..+..
T Consensus 219 ~~~~~~f 225 (230)
T 1ypz_F 219 ADQAIFF 225 (230)
T ss_dssp SCEEEEE
T ss_pred eeEeeec
Confidence 4555544
No 458
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.53 E-value=3.1e-07 Score=65.47 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=48.0
Q ss_pred CEEEEcCCC-CCcc--CeEEEeeEeccCCCEEEEEccC-Ce---Eeec--------ccCceE-EeeCC--cEEEcCCCCC
Q psy5697 47 PFRIKSAPG-GNRT--RGLELTRQTRYEPSQLGWRFSN-NT---VIAY--------VKDLRI-ALSNG--SLMFPPFPET 108 (145)
Q Consensus 47 P~~i~~p~~-~~~~--g~~L~C~a~G~P~P~i~W~~~d-g~---~i~~--------~~~~~~-~~~~G--sL~i~~~~~~ 108 (145)
+.+.+.|.. .+.. .++|.|.+.+.+.+.|.|++.+ +. .+.. .+.... ...++ +|.|.+++.+
T Consensus 17 ~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~ 96 (146)
T 2yc1_B 17 IVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPE 96 (146)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHH
Confidence 445555554 2223 3999999999988999999754 21 1211 011111 11222 6999888765
Q ss_pred CCCCCCCCeEEEEEEEcCC
Q psy5697 109 GFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 109 ~~~~~~d~G~Y~C~A~N~~ 127 (145)
|+|+|.|.+.|..
T Consensus 97 ------DsG~Y~C~~~~~~ 109 (146)
T 2yc1_B 97 ------DFAIYYCQQYRYS 109 (146)
T ss_dssp ------GCSEEEEEECSSS
T ss_pred ------HCEEEEEEEecCC
Confidence 8999999999874
No 459
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.52 E-value=1.5e-07 Score=71.00 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=60.4
Q ss_pred eecCceeEeeccccCcccCCceeee---EEEeccCCCCCCCEEEEc-CCC-CC--ccCeEEEeeEecc-CC-CEEEEEcc
Q psy5697 10 LADADTYIIADRSLFPRPLGYLVGN---IVYSSRSENEHYPFRIKS-APG-GN--RTRGLELTRQTRY-EP-SQLGWRFS 80 (145)
Q Consensus 10 ~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~P~~i~~-p~~-~~--~~g~~L~C~a~G~-P~-P~i~W~~~ 80 (145)
..|+++|.|......... ..+|. ..+........+|.+... |.. .. +..+.|.|.+.|. |. ++|+|++
T Consensus 85 ~~D~G~Y~C~~~~~~~~~--~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~- 161 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYE--QYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV- 161 (252)
T ss_dssp SCCCEEEEEEEESSTTSC--CEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-
T ss_pred hhhCEEEEEEEecCCccc--eeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEE-
Confidence 678889998775431000 01111 111111222457766544 432 11 2338999999996 75 4999975
Q ss_pred CCeEeecccCce---E--E--eeCCc------EEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 81 NNTVIAYVKDLR---I--A--LSNGS------LMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 81 dg~~i~~~~~~~---~--~--~~~Gs------L~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
||+.+....... . . ..+|+ |.|.+.... .|.|.|+|.|+|....
T Consensus 162 ~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~-----d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 162 NGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQ-----NPRNHFRCQVQFYGLS 218 (252)
T ss_dssp TTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHT-----CTTCEEEEEEEECCBC
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhc-----cCCCEEEEEEEcCCCC
Confidence 888775321000 0 0 13454 555432211 1478999999998654
No 460
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.52 E-value=2.2e-07 Score=68.93 Aligned_cols=62 Identities=13% Similarity=0.069 Sum_probs=42.7
Q ss_pred eEEEeeEeccC--CCEEEEEccC-CeE---ee-------------cccCceEEee-----CCcEEEcCCCCCCCCCCCCC
Q psy5697 61 GLELTRQTRYE--PSQLGWRFSN-NTV---IA-------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 61 ~~L~C~a~G~P--~P~i~W~~~d-g~~---i~-------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d~ 116 (145)
+.|.|.+.|.| .+.|.|++.+ |.. +. ..++...... +.+|.|.++..+ |+
T Consensus 18 v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D~ 91 (223)
T 1dee_B 18 LRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE------DT 91 (223)
T ss_dssp EEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG------GC
T ss_pred EEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH------HC
Confidence 99999999987 5899998743 321 10 0112222221 237999988765 89
Q ss_pred eEEEEEEEcCCC
Q psy5697 117 TVYRCRASNEAG 128 (145)
Q Consensus 117 G~Y~C~A~N~~G 128 (145)
|.|.|.+.|..|
T Consensus 92 G~Y~C~~~~~~~ 103 (223)
T 1dee_B 92 AVYYCAKVKFYD 103 (223)
T ss_dssp EEEEEEEESSSS
T ss_pred EEEEEEEecccc
Confidence 999999999864
No 461
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.51 E-value=4e-07 Score=66.66 Aligned_cols=63 Identities=8% Similarity=0.067 Sum_probs=42.0
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee---------------cccCceEEeeCC---cEEEcCCCCCCCCCCCCCeE
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA---------------YVKDLRIALSNG---SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~---------------~~~~~~~~~~~G---sL~i~~~~~~~~~~~~d~G~ 118 (145)
.+.|.|.+.|.+ .+.|.|++.+ |.... ..++......++ +|.|.++..+ |+|.
T Consensus 16 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~ 89 (215)
T 3nl4_H 16 PLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE------DTAT 89 (215)
T ss_dssp CEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG------GCEE
T ss_pred cEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc------cCEE
Confidence 399999998844 7899998643 22111 011111222222 5999988765 8999
Q ss_pred EEEEEEcCCC
Q psy5697 119 YRCRASNEAG 128 (145)
Q Consensus 119 Y~C~A~N~~G 128 (145)
|.|.+.|..|
T Consensus 90 Y~C~~~~~~~ 99 (215)
T 3nl4_H 90 YFCVRKYGSE 99 (215)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEecCCC
Confidence 9999999976
No 462
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.50 E-value=2.6e-07 Score=72.53 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=49.6
Q ss_pred eEEEeeEeccC-CCEEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 61 GLELTRQTRYE-PSQLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 61 ~~L~C~a~G~P-~P~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
++|.|.+.|.| .|.|+|++++ ..+.. ...+....+++|.|.++..+ |+|.|+|.+ .|.. .+..+.|.
T Consensus 24 v~l~C~~~~~~~~~~i~W~~~~-~~~~~-~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~---~g~~~~~~~L~V~ 92 (325)
T 1n26_A 24 VTLTCPGVEPEDNATVHWVLRK-PAAGS-HPSRWAGMGRRLLLRSVQLH------DSGNYSCYR---AGRPAGTVHLLVD 92 (325)
T ss_dssp EEEECTTSCTTCCSEEEEEEEC-SSSSC-CCEEEEEESSEEEECSCCGG------GCEEEEEES---SSSCSCEEEEEEC
T ss_pred EEEEeCCCCCCCCceEEEEECC-ccCCc-cccccccccceEEecccchh------hCeEeEEEe---CCEEeeeEEEEec
Confidence 99999999866 7999998644 33321 12234456789999988655 899999993 6776 45566666
Q ss_pred eccC
Q psy5697 139 ADSR 142 (145)
Q Consensus 139 ~~~~ 142 (145)
.++.
T Consensus 93 ~pP~ 96 (325)
T 1n26_A 93 VPPE 96 (325)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 4443
No 463
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.50 E-value=2.9e-07 Score=69.99 Aligned_cols=85 Identities=14% Similarity=0.179 Sum_probs=46.8
Q ss_pred CCCCCEEEEcCC-CCCc--cCeEEEeeEec-cC-CCEEEEEccCCeEeecccCceEEeeCC------cEEEcCCCCCCCC
Q psy5697 43 NEHYPFRIKSAP-GGNR--TRGLELTRQTR-YE-PSQLGWRFSNNTVIAYVKDLRIALSNG------SLMFPPFPETGFR 111 (145)
Q Consensus 43 ~~~~P~~i~~p~-~~~~--~g~~L~C~a~G-~P-~P~i~W~~~dg~~i~~~~~~~~~~~~G------sL~i~~~~~~~~~ 111 (145)
...+|.+...++ .... ..+.|.|.+.| .| +++++|+ ++|..+...........+| +|.|.+...
T Consensus 138 ~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~-~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~---- 212 (248)
T 3u2s_H 138 STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL---- 212 (248)
T ss_dssp CCBCCEEEEECCC------CEEEEEEEEEEEBSSCCEEEEG-GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGB----
T ss_pred CCCCCEEEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEe-ECCccCceeecCceECCCCCEEEEEEEEEChhhc----
Confidence 345676654443 3222 23899999988 55 4679996 4665322111111222344 455554322
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEE
Q psy5697 112 PDVHSTVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 112 ~~~d~G~Y~C~A~N~~G~~-~s~~v 135 (145)
.| |.|+|.|+|..+.. ....+
T Consensus 213 --~~-~~ytC~v~h~~~~~~~~~~l 234 (248)
T 3u2s_H 213 --GT-QTYICNVNHKPSNTKVDKKV 234 (248)
T ss_dssp --TT-BCCEEEEEEGGGTEEEEEEC
T ss_pred --CC-CeEEEEEEECCCCcceEEEE
Confidence 15 99999999998765 33333
No 464
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.50 E-value=5.1e-07 Score=62.80 Aligned_cols=64 Identities=14% Similarity=0.030 Sum_probs=42.9
Q ss_pred CeEEEeeEecc--CCCEEEEEcc-CCeE---e-ecccCceEEee----CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCC
Q psy5697 60 RGLELTRQTRY--EPSQLGWRFS-NNTV---I-AYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 128 (145)
Q Consensus 60 g~~L~C~a~G~--P~P~i~W~~~-dg~~---i-~~~~~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G 128 (145)
.++|.|.+.+. +.+.+.|++. .|+. + ....+...... +.+|.|.+++.+ |+|.|.|.+.|..+
T Consensus 17 svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~------DsG~Y~C~~~~~~~ 90 (126)
T 3moq_A 17 SLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVE------DSGTYKCQAFYVFF 90 (126)
T ss_dssp CEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEEEEEEEE
T ss_pred CEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChH------hCEEEEEEEEEcCC
Confidence 39999999886 6789999974 2322 1 11111111111 227999888765 89999999999866
Q ss_pred c
Q psy5697 129 V 129 (145)
Q Consensus 129 ~ 129 (145)
.
T Consensus 91 ~ 91 (126)
T 3moq_A 91 A 91 (126)
T ss_dssp T
T ss_pred C
Confidence 3
No 465
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.49 E-value=4.2e-07 Score=70.27 Aligned_cols=57 Identities=11% Similarity=0.179 Sum_probs=41.7
Q ss_pred CeEEEeeEec-------cCCCEEEEEccCCeEeecccCceEEeeC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 60 RGLELTRQTR-------YEPSQLGWRFSNNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 60 g~~L~C~a~G-------~P~P~i~W~~~dg~~i~~~~~~~~~~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
.+.|.|.+.| .|.|.|+|+ +||..+... +. .+..+ ++|.|.++... .|.|+|.|.|.
T Consensus 21 ~v~l~C~~~~~~~~~~~~p~p~i~W~-~~g~~i~~~-~~-~~~~~~~~~L~i~~~~~~-------~g~Y~C~a~~~ 86 (303)
T 1i1r_A 21 NFTAVCVLKEKCMDYFHVNANYIVWK-TNHFTIPKE-QY-TIINRTASSVTFTDIASL-------NIQLTCNILTF 86 (303)
T ss_dssp CEEEEEEECHHHHHHHTCCGGGEEEE-ETTEECCGG-GC-EEEETTEEEEEECSCCCS-------EEEEEEEEEET
T ss_pred CEEEEEEECCccccccCCChhheEEE-ECCEECChh-he-eeeCCcEEEEEEcCcCCC-------ceEEEEecccC
Confidence 3999999996 489999997 588887543 22 33332 36999877532 59999999884
No 466
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.49 E-value=5.9e-07 Score=59.86 Aligned_cols=72 Identities=13% Similarity=-0.003 Sum_probs=46.0
Q ss_pred eEEEeeEec-cCCCEEEEEccC-Ce-----E-eec--------ccCceEE-----eeCCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 61 GLELTRQTR-YEPSQLGWRFSN-NT-----V-IAY--------VKDLRIA-----LSNGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 61 ~~L~C~a~G-~P~P~i~W~~~d-g~-----~-i~~--------~~~~~~~-----~~~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
+.|.|...+ .+.+.+.|++.+ +. . +.. ..+.... ..+.+|.|.+++.+ |+|.|
T Consensus 15 v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~------DsG~Y 88 (116)
T 2or8_A 15 VTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVES------DSGLY 88 (116)
T ss_dssp EEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGG------GCEEE
T ss_pred EEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcc------cCEEE
Confidence 999999876 456789999754 10 0 100 0111111 12348999988765 89999
Q ss_pred EEEEEcCCCce-EEEEEEEE
Q psy5697 120 RCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 120 ~C~A~N~~G~~-~s~~v~v~ 138 (145)
.|.+.|..+.. ....++|.
T Consensus 89 ~C~v~~~~~~~~~~~~~~l~ 108 (116)
T 2or8_A 89 CCRVEIPGWFNDQKVTFSLQ 108 (116)
T ss_dssp EEEECCSSTTCCEEEEEEEE
T ss_pred EEEEEcCCcccccEEEEEEE
Confidence 99999986543 35556665
No 467
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.48 E-value=1.5e-07 Score=63.60 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=41.8
Q ss_pred CeEEEeeEecc-CCCEEEEEccCCe---Eeeccc-----CceEE-----eeC--CcEEEcCCCCCCCCCCCCCeEEEEEE
Q psy5697 60 RGLELTRQTRY-EPSQLGWRFSNNT---VIAYVK-----DLRIA-----LSN--GSLMFPPFPETGFRPDVHSTVYRCRA 123 (145)
Q Consensus 60 g~~L~C~a~G~-P~P~i~W~~~dg~---~i~~~~-----~~~~~-----~~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A 123 (145)
.++|.|.+.+. |.+.|.|++.++. .+.... +.... ..+ .+|.|.++..+ |+|.|.|.+
T Consensus 24 ~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~ 97 (120)
T 2yz1_A 24 STVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPE------DAGTYYCVK 97 (120)
T ss_dssp CEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGG------GCEEEEEEE
T ss_pred CEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHH------HCEEEEEEE
Confidence 39999999876 7789999976532 221110 11101 112 47999988765 899999999
Q ss_pred EcCC
Q psy5697 124 SNEA 127 (145)
Q Consensus 124 ~N~~ 127 (145)
.|..
T Consensus 98 ~~~~ 101 (120)
T 2yz1_A 98 FQKG 101 (120)
T ss_dssp EECC
T ss_pred EcCC
Confidence 9874
No 468
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.48 E-value=2.3e-07 Score=62.41 Aligned_cols=62 Identities=18% Similarity=0.263 Sum_probs=41.5
Q ss_pred CeEEEeeEeccCC------CEEEEEccC-Ce---Eeec--------ccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeE
Q psy5697 60 RGLELTRQTRYEP------SQLGWRFSN-NT---VIAY--------VKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 60 g~~L~C~a~G~P~------P~i~W~~~d-g~---~i~~--------~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~ 118 (145)
.++|.|.+.+.+. +.+.|++.+ |. .+.. .++.... ..++ +|.|.++..+ |+|.
T Consensus 18 ~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~------DsG~ 91 (114)
T 1eeq_A 18 RATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAE------DVAV 91 (114)
T ss_dssp CEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG------GCEE
T ss_pred eEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcc------cCEE
Confidence 3999999999883 899999753 22 1210 1111111 2223 7999988765 8999
Q ss_pred EEEEEEcCC
Q psy5697 119 YRCRASNEA 127 (145)
Q Consensus 119 Y~C~A~N~~ 127 (145)
|.|.+.|..
T Consensus 92 Y~C~~~~~~ 100 (114)
T 1eeq_A 92 YYCQQYYSH 100 (114)
T ss_dssp EEEEECSSS
T ss_pred EEEEEeeCC
Confidence 999999863
No 469
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.47 E-value=6.2e-07 Score=73.47 Aligned_cols=76 Identities=11% Similarity=-0.018 Sum_probs=48.0
Q ss_pred CCEE-EEcCCCC-Ccc--CeEEEeeEeccCC---CEEEEEccCCeEeecc-cCceEEe------eCCcEEEcCCCCCCCC
Q psy5697 46 YPFR-IKSAPGG-NRT--RGLELTRQTRYEP---SQLGWRFSNNTVIAYV-KDLRIAL------SNGSLMFPPFPETGFR 111 (145)
Q Consensus 46 ~P~~-i~~p~~~-~~~--g~~L~C~a~G~P~---P~i~W~~~dg~~i~~~-~~~~~~~------~~GsL~i~~~~~~~~~ 111 (145)
+|.+ +..|... ... .+.|.|.+.|.|+ +.|+| . ++ .+... ....... ..++|.|.++..+
T Consensus 246 ~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~-~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~--- 319 (475)
T 1iga_A 246 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PS-SGKSAVQGPPERDLCGCYSVSSVLPGCAEPWN--- 319 (475)
T ss_pred CcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CC-CcCCccccCceECCCCCEEEEEEEEEchHHhc---
Confidence 5554 5544432 123 3899999999865 79999 3 32 22211 1111111 2346888877654
Q ss_pred CCCCCeEEEEEEEcCCCce
Q psy5697 112 PDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 112 ~~~d~G~Y~C~A~N~~G~~ 130 (145)
|+|.|+|.|.|..|..
T Consensus 320 ---d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 320 ---HGKTFTCTAAYPESKT 335 (475)
T ss_pred ---cCCcEEEEEEcCCCCC
Confidence 8999999999999986
No 470
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.45 E-value=3.6e-07 Score=70.08 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=43.6
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee----c------------ccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA----Y------------VKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~----~------------~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .+.|.|++.+ |..+. . ..+...... +.+|.|.++..+ |
T Consensus 23 ~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D 96 (261)
T 2xqy_G 23 SVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSE------D 96 (261)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG------G
T ss_pred CEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcc------c
Confidence 399999999988 7999998753 32211 0 111222221 248999988765 8
Q ss_pred CeEEEEEEEcCCC
Q psy5697 116 STVYRCRASNEAG 128 (145)
Q Consensus 116 ~G~Y~C~A~N~~G 128 (145)
+|.|.|.+.|..+
T Consensus 97 sG~Y~C~~~~~~~ 109 (261)
T 2xqy_G 97 SAVYYCGRLGYVY 109 (261)
T ss_dssp CEEEEEEEECTTS
T ss_pred CeEEEEEEecCCC
Confidence 9999999999754
No 471
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.45 E-value=7.8e-07 Score=66.08 Aligned_cols=59 Identities=12% Similarity=0.114 Sum_probs=39.2
Q ss_pred CeEEEeeEeccCCCEEEEEccC-Ce------------Eeec--ccCceEEee----CCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NT------------VIAY--VKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~------------~i~~--~~~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|.+.+ |.+.|.|++.+ +. .... .++...... +.+|.|.+++.+ |+|.|+
T Consensus 19 ~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~------D~G~Y~ 91 (240)
T 3q5y_A 19 RSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELE------DSAMYF 91 (240)
T ss_dssp CEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGG------GCEEEE
T ss_pred cEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChh------HCEEEE
Confidence 3999999988 89999998721 11 1110 111222222 237999988765 899999
Q ss_pred EEEEc
Q psy5697 121 CRASN 125 (145)
Q Consensus 121 C~A~N 125 (145)
|.|.+
T Consensus 92 C~~~~ 96 (240)
T 3q5y_A 92 CASSL 96 (240)
T ss_dssp EEEES
T ss_pred EEEcc
Confidence 99984
No 472
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.44 E-value=5.3e-07 Score=67.64 Aligned_cols=62 Identities=8% Similarity=0.031 Sum_probs=42.0
Q ss_pred CeEEEeeEecc--CCCEEEEEccC-CeE---eec-------------ccCceEEe-e----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRY--EPSQLGWRFSN-NTV---IAY-------------VKDLRIAL-S----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~--P~P~i~W~~~d-g~~---i~~-------------~~~~~~~~-~----~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|. +.+.|.|++.+ |.. +.. ..+..... . +.+|.|.++..+ |
T Consensus 18 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D 91 (242)
T 1hxm_B 18 TARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQ------D 91 (242)
T ss_dssp CEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGG------G
T ss_pred cEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcc------c
Confidence 39999999996 78999998743 321 110 11122222 1 237999888765 8
Q ss_pred CeEEEEEEEcCC
Q psy5697 116 STVYRCRASNEA 127 (145)
Q Consensus 116 ~G~Y~C~A~N~~ 127 (145)
+|.|.|.+.|..
T Consensus 92 ~G~Y~C~~~~~~ 103 (242)
T 1hxm_B 92 IATYYCALWEAQ 103 (242)
T ss_dssp CEEEEEEEEEEC
T ss_pred CEEEEEeeecCC
Confidence 999999999974
No 473
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.44 E-value=4.9e-07 Score=61.01 Aligned_cols=61 Identities=10% Similarity=-0.041 Sum_probs=40.8
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeE---ee-cccCceEEe--eC--CcEEEcCCCCCCCCCCCCCeEEEEEEEcC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTV---IA-YVKDLRIAL--SN--GSLMFPPFPETGFRPDVHSTVYRCRASNE 126 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~---i~-~~~~~~~~~--~~--GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~ 126 (145)
.+.|.|.+.+.+ .+.+.|++.+ |.. +. ...+..... .. .+|.|.++..+ |+|.|.|.+.|.
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~------DsG~Y~C~~~~~ 88 (113)
T 1sq2_N 17 SLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVE------DGGTYRCGLGVA 88 (113)
T ss_dssp CEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEEECBT
T ss_pred CEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChh------hCEEEEEEEEeC
Confidence 399999999877 6799998743 322 11 111221111 12 27999988765 899999999984
No 474
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.43 E-value=1.6e-06 Score=69.70 Aligned_cols=111 Identities=12% Similarity=0.060 Sum_probs=61.1
Q ss_pred ecCceeEeeccccCcccCCceeeeEEEeccCCCCCCCEEEEcCCCC---CccCeEEEeeEeccC--CCEEEEEccCCeEe
Q psy5697 11 ADADTYIIADRSLFPRPLGYLVGNIVYSSRSENEHYPFRIKSAPGG---NRTRGLELTRQTRYE--PSQLGWRFSNNTVI 85 (145)
Q Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~i~~p~~~---~~~g~~L~C~a~G~P--~P~i~W~~~dg~~i 85 (145)
.|.+.|.|......... .+.. ..........+|.+...++.. ....+.|.|.|.|.+ .++|+|+ +||+.+
T Consensus 243 ~D~g~Y~C~~~~~~~~~--~~~~--~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~-k~g~~~ 317 (376)
T 2aty_A 243 LNGKEFKCRVNSAAFPA--PIEK--TISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQ-WNGQPA 317 (376)
T ss_pred cCCCEEEEEEecCCCCC--ceEE--EEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEE-ECCEEC
Confidence 36677887764432211 1111 111222445678776666552 223389999999964 4589997 588876
Q ss_pred ecccCce-EEeeCCcEEEc---CCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 86 AYVKDLR-IALSNGSLMFP---PFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 86 ~~~~~~~-~~~~~GsL~i~---~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
....... ....+|+..+. .+... ...|.|.|+|.|+|..-.
T Consensus 318 ~~~~~~~~~~~~dgty~~~s~L~i~~~---~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 318 ENYKNTQPIMNTNESYFVYSKLNVQKS---NWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred CCeEeCCceECCCCCEEEEEEEEEcHH---HhCCCCcEEEEEEeCCCC
Confidence 4321111 22445543221 12221 112589999999998643
No 475
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=98.43 E-value=1.2e-06 Score=65.27 Aligned_cols=117 Identities=15% Similarity=0.155 Sum_probs=61.2
Q ss_pred eeceee-eecCceeEeeccccCc--c-cCCceeeeEEEe-ccCCCCCCCEEEE-cCCCCCcc--CeEEEeeEecc-C-CC
Q psy5697 4 FHISTL-LADADTYIIADRSLFP--R-PLGYLVGNIVYS-SRSENEHYPFRIK-SAPGGNRT--RGLELTRQTRY-E-PS 73 (145)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~p--~-~~~~~~~~~~~~-~~~~~~~~P~~i~-~p~~~~~~--g~~L~C~a~G~-P-~P 73 (145)
++|+.+ ..|.++|.|....... . .-...+|..+.- .......+|.+.. .|...... .+.|.|.+.|. | ++
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~ 160 (230)
T 3n9g_H 81 MELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 160 (230)
T ss_dssp EEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCC
T ss_pred EEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCE
Confidence 344444 7888899998754210 0 000022221111 1112345676654 33332223 38999999984 4 35
Q ss_pred EEEEEccCCeEeecc--cCceEEeeCC------cEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 74 QLGWRFSNNTVIAYV--KDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 74 ~i~W~~~dg~~i~~~--~~~~~~~~~G------sL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+|+| ||..+... ........+| +|.|.+.... | |.|+|.|+|..+..
T Consensus 161 ~v~W---~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------~-~~ytC~v~h~~~~~ 215 (230)
T 3n9g_H 161 TVSW---NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSNT 215 (230)
T ss_dssp EEEE---GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBT------T-BCCEEEEEEGGGTE
T ss_pred EEEE---CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcC------C-CeEEEEEEECCCCc
Confidence 6999 34333210 0001122334 5777654322 7 99999999998765
No 476
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.42 E-value=5.3e-07 Score=69.21 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=43.3
Q ss_pred eEEEeeEeccC--CCEEEEEccC-CeEee----------------cccCceEEee-----CCcEEEcCCCCCCCCCCCCC
Q psy5697 61 GLELTRQTRYE--PSQLGWRFSN-NTVIA----------------YVKDLRIALS-----NGSLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 61 ~~L~C~a~G~P--~P~i~W~~~d-g~~i~----------------~~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d~ 116 (145)
++|.|.+.|.| .+.|.|++.+ |..+. ..++...... +.+|.|.++..+ |+
T Consensus 18 v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------Ds 91 (257)
T 3bn9_D 18 LRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE------DT 91 (257)
T ss_dssp EEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG------GC
T ss_pred EEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh------hC
Confidence 99999999987 7899998754 32111 0111222221 237999988765 89
Q ss_pred eEEEEEEEcCCC
Q psy5697 117 TVYRCRASNEAG 128 (145)
Q Consensus 117 G~Y~C~A~N~~G 128 (145)
|.|.|.+.|..|
T Consensus 92 G~Y~C~~~~~~g 103 (257)
T 3bn9_D 92 AVYYCARPYLTY 103 (257)
T ss_dssp EEEEEEEECCSS
T ss_pred EEEEEEEecCCC
Confidence 999999999876
No 477
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.41 E-value=9.6e-07 Score=64.90 Aligned_cols=62 Identities=8% Similarity=0.134 Sum_probs=41.3
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee------------------cccCceEEeeCC-----cEEEcCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA------------------YVKDLRIALSNG-----SLMFPPFPETGFRPD 113 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~------------------~~~~~~~~~~~G-----sL~i~~~~~~~~~~~ 113 (145)
.+.|.|.+.|.+ .+.|.|++.+ |.... ..++......++ +|.|.++..+
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~----- 91 (221)
T 3m8o_H 17 SLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKSD----- 91 (221)
T ss_dssp CEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCGG-----
T ss_pred CEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCHH-----
Confidence 399999999855 7899998643 32110 011122222222 5999988766
Q ss_pred CCCeEEEEEEEcCC
Q psy5697 114 VHSTVYRCRASNEA 127 (145)
Q Consensus 114 ~d~G~Y~C~A~N~~ 127 (145)
|+|.|.|.+.|..
T Consensus 92 -DsG~Y~C~~~~~~ 104 (221)
T 3m8o_H 92 -DTAMYYCVIRGDV 104 (221)
T ss_dssp -GCEEEEEEEESCT
T ss_pred -HCEEEEEEEECCC
Confidence 8999999999974
No 478
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.40 E-value=1.4e-06 Score=64.36 Aligned_cols=61 Identities=13% Similarity=0.004 Sum_probs=41.1
Q ss_pred eEEEeeEeccCCCEEEEEccC-Ce---Eee------cccCceEEeeC------CcEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 61 GLELTRQTRYEPSQLGWRFSN-NT---VIA------YVKDLRIALSN------GSLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 61 ~~L~C~a~G~P~P~i~W~~~d-g~---~i~------~~~~~~~~~~~------GsL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
+.|.|.+.+.+ +.|.|++.+ |. .+. ...+......+ .+|.|.+++.+ |+|.|.|.+.
T Consensus 19 v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~ 91 (207)
T 1ypz_E 19 SALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLE------DSGTYFCAAD 91 (207)
T ss_dssp EEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGG------GCEEEEEEEE
T ss_pred EEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHH------HCEEEEEEEe
Confidence 99999998865 699998743 32 111 01122222222 37999988765 8999999999
Q ss_pred cCCC
Q psy5697 125 NEAG 128 (145)
Q Consensus 125 N~~G 128 (145)
|..|
T Consensus 92 ~~~~ 95 (207)
T 1ypz_E 92 TWHI 95 (207)
T ss_dssp CBCC
T ss_pred cCCc
Confidence 9853
No 479
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.39 E-value=4.2e-07 Score=70.30 Aligned_cols=62 Identities=15% Similarity=0.212 Sum_probs=42.4
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeE---ee-------------ccc-CceEEe----eCCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTV---IA-------------YVK-DLRIAL----SNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~---i~-------------~~~-~~~~~~----~~GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|.| .|.|.|++.+ |.. +. ..+ +..... .+++|.|.++..+ |
T Consensus 39 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D 112 (291)
T 2gki_A 39 SVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSE------D 112 (291)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGG------G
T ss_pred CEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHH------H
Confidence 399999999988 6899998743 221 10 011 111111 1247999988765 8
Q ss_pred CeEEEEEEEcCC
Q psy5697 116 STVYRCRASNEA 127 (145)
Q Consensus 116 ~G~Y~C~A~N~~ 127 (145)
+|.|.|.+.|..
T Consensus 113 sG~Y~C~~~~~~ 124 (291)
T 2gki_A 113 SAVYYCARGAYK 124 (291)
T ss_dssp CEEEEEEEECGG
T ss_pred CEEEEEEEeccc
Confidence 999999999985
No 480
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.38 E-value=1.3e-06 Score=58.09 Aligned_cols=75 Identities=11% Similarity=-0.058 Sum_probs=48.3
Q ss_pred CeEEEeeEeccC-CCEEEEEccC-CeE---eec-------ccCceEE---eeCC--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTRQTRYE-PSQLGWRFSN-NTV---IAY-------VKDLRIA---LSNG--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~a~G~P-~P~i~W~~~d-g~~---i~~-------~~~~~~~---~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.++|.|...+.. .+.+.|++.+ +.. +-. ..+.... ..++ +|.|.++..+ |+|.|.|.
T Consensus 13 ~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~------DsG~Y~C~ 86 (110)
T 2q87_A 13 SLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEE------DAGTYWCG 86 (110)
T ss_dssp CEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGG------GCEEEEEE
T ss_pred cEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHH------HCEEEEEE
Confidence 399999987754 4799999753 221 100 1111122 1223 7999888765 89999999
Q ss_pred EEcCC-C--ceEEEEEEEEec
Q psy5697 123 ASNEA-G--VILSRFVHVKAD 140 (145)
Q Consensus 123 A~N~~-G--~~~s~~v~v~~~ 140 (145)
+.|.. | ......++|...
T Consensus 87 ~~~~~~g~~~~~~~~v~v~V~ 107 (110)
T 2q87_A 87 VDTPWLQDFHDPVVEVEVSVF 107 (110)
T ss_dssp EECTTSCCBCCCSEEEEEEEC
T ss_pred EecCccCccCCccEEEEEEEe
Confidence 99997 6 345566666654
No 481
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.37 E-value=8.7e-07 Score=59.41 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=41.3
Q ss_pred CeEEEeeEeccC-----CCEEEEEccC-Ce---Eeec--------ccCceEE-eeCC--cEEEcCCCCCCCCCCCCCeEE
Q psy5697 60 RGLELTRQTRYE-----PSQLGWRFSN-NT---VIAY--------VKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 60 g~~L~C~a~G~P-----~P~i~W~~~d-g~---~i~~--------~~~~~~~-~~~G--sL~i~~~~~~~~~~~~d~G~Y 119 (145)
.++|.|.+.+.+ .+.+.|++.. |. .+.. .++.... ..++ +|.|.+++.+ |+|.|
T Consensus 18 ~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~------DsG~Y 91 (113)
T 1dlf_L 18 QASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE------DLGVY 91 (113)
T ss_dssp CEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG------GCEEE
T ss_pred CEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChH------HCEEE
Confidence 399999999887 4899998743 22 1210 1111111 2223 7999988765 89999
Q ss_pred EEEEEcCC
Q psy5697 120 RCRASNEA 127 (145)
Q Consensus 120 ~C~A~N~~ 127 (145)
.|.+.|..
T Consensus 92 ~C~~~~~~ 99 (113)
T 1dlf_L 92 FCSQSTHV 99 (113)
T ss_dssp EEEECSSS
T ss_pred EEEEecCC
Confidence 99999863
No 482
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.37 E-value=7.8e-07 Score=68.40 Aligned_cols=61 Identities=8% Similarity=0.125 Sum_probs=40.8
Q ss_pred CeEEEeeEecc--CCCEEEEEccC-CeEee----c------------ccCceEEeeC-----CcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRY--EPSQLGWRFSN-NTVIA----Y------------VKDLRIALSN-----GSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~--P~P~i~W~~~d-g~~i~----~------------~~~~~~~~~~-----GsL~i~~~~~~~~~~~~d 115 (145)
.++|.|.+.|. |.+.|.|++.+ +.... . .++......+ .+|.|.++..+ |
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~------D 90 (280)
T 3fku_X 17 SVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSE------D 90 (280)
T ss_dssp CEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCST------T
T ss_pred cEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh------h
Confidence 39999999987 67899998643 21110 0 0111122211 27999988766 8
Q ss_pred CeEEEEEEEcC
Q psy5697 116 STVYRCRASNE 126 (145)
Q Consensus 116 ~G~Y~C~A~N~ 126 (145)
+|.|.|.+.|.
T Consensus 91 sG~Y~C~~~~~ 101 (280)
T 3fku_X 91 TAVYYCARSPS 101 (280)
T ss_dssp CEECCEEECSS
T ss_pred CEEEEEEEecC
Confidence 99999999997
No 483
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.37 E-value=9.4e-07 Score=66.79 Aligned_cols=60 Identities=17% Similarity=0.046 Sum_probs=40.4
Q ss_pred CeEEEeeEeccCCCEEEEEcc-CCeEe------------ec--cc-CceEEee----CCcEEEcCCCCCCCCCCCCCeEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFS-NNTVI------------AY--VK-DLRIALS----NGSLMFPPFPETGFRPDVHSTVY 119 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~-dg~~i------------~~--~~-~~~~~~~----~GsL~i~~~~~~~~~~~~d~G~Y 119 (145)
.++|.|.+. .|.+.|.|++. +|... .. .+ +...... +++|.|.+++.+ |+|.|
T Consensus 43 ~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~------D~G~Y 115 (268)
T 3pl6_D 43 YVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERG------DSAVY 115 (268)
T ss_dssp CEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGG------GCEEE
T ss_pred CEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcc------cCEEE
Confidence 399999987 58999999873 22211 00 00 1222222 447999988765 89999
Q ss_pred EEEEEcC
Q psy5697 120 RCRASNE 126 (145)
Q Consensus 120 ~C~A~N~ 126 (145)
.|.+.|.
T Consensus 116 ~C~~~~~ 122 (268)
T 3pl6_D 116 LCATSAL 122 (268)
T ss_dssp EEEEESS
T ss_pred EEEEecC
Confidence 9999985
No 484
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.37 E-value=1.1e-06 Score=65.58 Aligned_cols=60 Identities=13% Similarity=0.064 Sum_probs=40.6
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeE---ee------------cccCceEEee---CC--cEEEcCCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTV---IA------------YVKDLRIALS---NG--SLMFPPFPETGFRPDVHS 116 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~---i~------------~~~~~~~~~~---~G--sL~i~~~~~~~~~~~~d~ 116 (145)
.+.|.|.+.|.| .+.|.|++.+ |.. +. ..++...... ++ +|.|.++..+ |+
T Consensus 17 ~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D~ 90 (232)
T 1dn0_B 17 TLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAA------DT 90 (232)
T ss_dssp CEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG------GC
T ss_pred cEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcc------cC
Confidence 399999999986 6899998753 321 10 0112222221 23 8999988765 89
Q ss_pred eEEEEEEEc
Q psy5697 117 TVYRCRASN 125 (145)
Q Consensus 117 G~Y~C~A~N 125 (145)
|.|.|.+.+
T Consensus 91 G~Y~C~~~~ 99 (232)
T 1dn0_B 91 AVYYCARPP 99 (232)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEec
Confidence 999999993
No 485
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.36 E-value=1.2e-07 Score=76.56 Aligned_cols=73 Identities=16% Similarity=0.237 Sum_probs=46.9
Q ss_pred CeEEEeeEeccC--CCEEEEEccC-CeEee---c-------------ccCceEEee-----CCcEEEcCCCCCCCCCCCC
Q psy5697 60 RGLELTRQTRYE--PSQLGWRFSN-NTVIA---Y-------------VKDLRIALS-----NGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 60 g~~L~C~a~G~P--~P~i~W~~~d-g~~i~---~-------------~~~~~~~~~-----~GsL~i~~~~~~~~~~~~d 115 (145)
.+.|.|.+.|.+ .+.|.|++.+ |..+. . ..+...... +++|.|.++..+ |
T Consensus 16 ~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------D 89 (434)
T 1igy_B 16 SVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSD------D 89 (434)
T ss_dssp CEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGG------G
T ss_pred CEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChH------H
Confidence 399999999975 7899998753 33211 0 111222222 238999988765 8
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEE
Q psy5697 116 STVYRCRASNEAGVI-LSRFVHVK 138 (145)
Q Consensus 116 ~G~Y~C~A~N~~G~~-~s~~v~v~ 138 (145)
+|.|+|.|.|..+.. ....+.|.
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~l~V~ 113 (434)
T 1igy_B 90 SAVYYCVREGEVPYWGQGTTVTVS 113 (434)
T ss_dssp CSEECCCCSSSSCCCCCCEECEEC
T ss_pred CEEEEEEEEccccccCCceEEEEc
Confidence 999999999965433 23344443
No 486
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.36 E-value=2e-06 Score=57.32 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=44.6
Q ss_pred eEEEeeEeccCC-CEEEEEccCC-e---Eeec--------ccCceEEe---eCC--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 61 GLELTRQTRYEP-SQLGWRFSNN-T---VIAY--------VKDLRIAL---SNG--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 61 ~~L~C~a~G~P~-P~i~W~~~dg-~---~i~~--------~~~~~~~~---~~G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
++|.|...+.+. ..+.|++.+. . .+-. ..+..... .++ +|.|.+++.+ |+|.|.|.
T Consensus 19 v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~------DsG~Y~C~ 92 (113)
T 1zox_A 19 LTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMS------DAGIYWCG 92 (113)
T ss_dssp EEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGG------GCEEEEEE
T ss_pred EEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHH------HCEEEEEe
Confidence 999999987544 4699997542 1 1210 01111121 233 7999888765 89999999
Q ss_pred EEcCCCceEEEEEEEE
Q psy5697 123 ASNEAGVILSRFVHVK 138 (145)
Q Consensus 123 A~N~~G~~~s~~v~v~ 138 (145)
+.|.. ...+..+.|.
T Consensus 93 v~~~~-~~~~~~v~L~ 107 (113)
T 1zox_A 93 ITKGG-LDPMFKVTVN 107 (113)
T ss_dssp ECCSS-SCCEEEEEEE
T ss_pred eEcCC-CCccEEEEEE
Confidence 99974 4444555554
No 487
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.35 E-value=8.2e-07 Score=66.31 Aligned_cols=61 Identities=18% Similarity=0.187 Sum_probs=40.8
Q ss_pred CeEEEeeEeccCCCEEEEEccC-CeE---ee-----------cccCceEEe----eCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NTV---IA-----------YVKDLRIAL----SNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~~---i~-----------~~~~~~~~~----~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|.+.+ +.+.|.|++.+ |.. +. ..++..... .+++|.|.+++.+ |+|.|.
T Consensus 16 ~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~------D~G~Y~ 88 (238)
T 1bec_A 16 KVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPS------QTSVYF 88 (238)
T ss_dssp CEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGG------GCEEEE
T ss_pred cEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcc------cCEEEE
Confidence 3999999954 78999998753 321 10 011111221 1238999988765 899999
Q ss_pred EEEEcCC
Q psy5697 121 CRASNEA 127 (145)
Q Consensus 121 C~A~N~~ 127 (145)
|.+.|..
T Consensus 89 C~~~~~~ 95 (238)
T 1bec_A 89 CASGGGR 95 (238)
T ss_dssp EEEESCT
T ss_pred EEEecCC
Confidence 9999985
No 488
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.34 E-value=6.2e-07 Score=72.87 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=52.3
Q ss_pred CCEE-EEcCCCC--C--ccCeEEEeeEeccCCC----EEEEEccCCeEeeccc-CceEEeeCCcEEEcCCCCCCCCCCCC
Q psy5697 46 YPFR-IKSAPGG--N--RTRGLELTRQTRYEPS----QLGWRFSNNTVIAYVK-DLRIALSNGSLMFPPFPETGFRPDVH 115 (145)
Q Consensus 46 ~P~~-i~~p~~~--~--~~g~~L~C~a~G~P~P----~i~W~~~dg~~i~~~~-~~~~~~~~GsL~i~~~~~~~~~~~~d 115 (145)
+|.+ +..|... . +..+.|.|.+.|.|++ +|+|++ ||..+.... .......+|++.+..... . ...|
T Consensus 247 ~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~~l~--i-~~~d 322 (457)
T 1hzh_H 247 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVVSVLT--V-LHQD 322 (457)
T ss_dssp SCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEE-TTEEECCCEEEEEEECTTSCEEEEEEEC--C-CHHH
T ss_pred CceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEe-CCccccccccccceecCCCcEEEEEEEE--E-CHHH
Confidence 5665 5544331 2 2338999999999764 999984 777764321 112345577777653210 0 1114
Q ss_pred ---CeEEEEEEEcCCCce-EEEEE
Q psy5697 116 ---STVYRCRASNEAGVI-LSRFV 135 (145)
Q Consensus 116 ---~G~Y~C~A~N~~G~~-~s~~v 135 (145)
+|.|+|.|.|..+.. .+..+
T Consensus 323 ~~d~G~Y~C~a~n~~~~~~~~~~v 346 (457)
T 1hzh_H 323 WLNGKEYKCKVSNKALPAPIEKTI 346 (457)
T ss_dssp HHHTCCEEEEEECTTSSSCEEEEE
T ss_pred ccCCCcEEEEEeCCCCCCcceEEE
Confidence 999999999986654 33333
No 489
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.34 E-value=9.5e-07 Score=66.54 Aligned_cols=63 Identities=8% Similarity=-0.033 Sum_probs=42.4
Q ss_pred CeEEEeeEeccCCCEEEEEcc-CCeE---eec-----------ccC-ceEEeeCCc--EEEcCCCCCCCCCCCCCeEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFS-NNTV---IAY-----------VKD-LRIALSNGS--LMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~-dg~~---i~~-----------~~~-~~~~~~~Gs--L~i~~~~~~~~~~~~d~G~Y~C 121 (145)
.+.|.|.+.+.+.+.|.|++. .|.. +.. .++ ......++. |.|.+++.+ |+|.|.|
T Consensus 18 ~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~------DsG~Y~C 91 (253)
T 3to4_D 18 AVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMS------QGRTLYC 91 (253)
T ss_dssp CEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCS------SCEEEEE
T ss_pred cEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChh------hCeEEEE
Confidence 399999999999999999863 2221 100 011 112222222 999988766 8999999
Q ss_pred EEEcCCC
Q psy5697 122 RASNEAG 128 (145)
Q Consensus 122 ~A~N~~G 128 (145)
.+.|..+
T Consensus 92 ~~~~~~~ 98 (253)
T 3to4_D 92 TSSADHW 98 (253)
T ss_dssp EEECSCC
T ss_pred EEecCCC
Confidence 9998765
No 490
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.34 E-value=5.7e-07 Score=59.97 Aligned_cols=62 Identities=15% Similarity=0.188 Sum_probs=40.7
Q ss_pred CeEEEee-EeccC-CCEEEEEccCCeE--eec--------ccCceEEe---eCC--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 60 RGLELTR-QTRYE-PSQLGWRFSNNTV--IAY--------VKDLRIAL---SNG--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 60 g~~L~C~-a~G~P-~P~i~W~~~dg~~--i~~--------~~~~~~~~---~~G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
.++|.|. +.+.+ .+.+.|++.+..+ +-. .++..... ..+ +|.|.++..+ |+|.|.|.
T Consensus 17 ~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~ 90 (109)
T 1pew_A 17 TVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTE------DEADYYCQ 90 (109)
T ss_dssp CEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEE
T ss_pred CEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChh------hCEEEEEE
Confidence 3999999 88876 5899999755221 100 01111221 222 7999988765 89999999
Q ss_pred EEcCC
Q psy5697 123 ASNEA 127 (145)
Q Consensus 123 A~N~~ 127 (145)
+.|..
T Consensus 91 ~~~~~ 95 (109)
T 1pew_A 91 SYDAR 95 (109)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99863
No 491
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.32 E-value=2.7e-06 Score=58.33 Aligned_cols=75 Identities=13% Similarity=0.060 Sum_probs=46.0
Q ss_pred CEEEEcCCC-CC--ccCeEEEeeEe-------ccCCCEEEEEccCC-e----Eeec----------ccCceEEee-----
Q psy5697 47 PFRIKSAPG-GN--RTRGLELTRQT-------RYEPSQLGWRFSNN-T----VIAY----------VKDLRIALS----- 96 (145)
Q Consensus 47 P~~i~~p~~-~~--~~g~~L~C~a~-------G~P~P~i~W~~~dg-~----~i~~----------~~~~~~~~~----- 96 (145)
.++++.|.. .+ +..+.|.|... +.+.+.+.|++.+. . .+.. .++......
T Consensus 7 ~~~~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~ 86 (132)
T 1nko_A 7 DYSLTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTK 86 (132)
T ss_dssp GCEEEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGT
T ss_pred CeEEeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCC
Confidence 345555554 22 23399999987 45678999997532 1 1211 111222222
Q ss_pred CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCC
Q psy5697 97 NGSLMFPPFPETGFRPDVHSTVYRCRASNEA 127 (145)
Q Consensus 97 ~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~ 127 (145)
+.+|.|.+++.+ |+|.|.|.+.+..
T Consensus 87 ~~sL~I~~v~~~------DsG~Y~C~v~~~~ 111 (132)
T 1nko_A 87 NCTLSIRDARMS------DAGRYFFRMEKGN 111 (132)
T ss_dssp BCCEEECSCCGG------GCEEEEEEEEETT
T ss_pred ceEEEEcccCcc------cCeeEEEEEEcCC
Confidence 228999988766 8999999999864
No 492
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.31 E-value=2e-06 Score=60.99 Aligned_cols=72 Identities=18% Similarity=0.244 Sum_probs=46.2
Q ss_pred CeEEEeeEeccCCCEEEEEccC-Ce---Eeec--------ccCc-eEEeeCC--cEEEcCCCCCCCCCCCCCeEEEEEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NT---VIAY--------VKDL-RIALSNG--SLMFPPFPETGFRPDVHSTVYRCRAS 124 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~---~i~~--------~~~~-~~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~A~ 124 (145)
.++|.|.+.+.+.+.+.|++.+ |+ .+-. .+.. .....++ +|.|.+++.+ |+|.|.|.+.
T Consensus 17 ~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~------DsG~Y~C~~~ 90 (143)
T 3u6r_L 17 RATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPE------DFAVYYCQQR 90 (143)
T ss_dssp CEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG------GCEEEEEEEC
T ss_pred CEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCccc------CCEEEEEEEe
Confidence 3999999999888899999753 22 1211 1111 1112222 7999888765 8999999999
Q ss_pred cCCCce--EEEEEEEE
Q psy5697 125 NEAGVI--LSRFVHVK 138 (145)
Q Consensus 125 N~~G~~--~s~~v~v~ 138 (145)
|.. .. ....+.|.
T Consensus 91 ~~~-~~fg~gt~L~V~ 105 (143)
T 3u6r_L 91 SDW-VTFGGGTKVEIK 105 (143)
T ss_dssp SSB-CEECCCEEEEEC
T ss_pred cCC-CEECCCEEEEEC
Confidence 875 22 22455555
No 493
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.29 E-value=2e-06 Score=69.03 Aligned_cols=63 Identities=11% Similarity=0.065 Sum_probs=40.9
Q ss_pred eEEEeeEecc-CCC---EEEEEccCCeEeecc-cCceEEee------CCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCc
Q psy5697 61 GLELTRQTRY-EPS---QLGWRFSNNTVIAYV-KDLRIALS------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 129 (145)
Q Consensus 61 ~~L~C~a~G~-P~P---~i~W~~~dg~~i~~~-~~~~~~~~------~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 129 (145)
+.|.|.+.|. |.| +|+|++.+ ..+... ........ ..+|.|.++..+ |+|.|+|.|.|..+.
T Consensus 186 v~L~C~~~g~~P~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~------D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 186 PKVTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTQPREEQFNSTFRSVSELPIMHQDWL------NGKEFKCRVNSAAFP 258 (376)
T ss_pred eEEEEEEeccccCCCccEEEEEECC-ccccCcccCCCCcccCCcEEEEEEEEechHhcc------CCCEEEEEEecCCCC
Confidence 8999999998 444 69998644 333211 11111112 226888665443 899999999999875
Q ss_pred e
Q psy5697 130 I 130 (145)
Q Consensus 130 ~ 130 (145)
.
T Consensus 259 ~ 259 (376)
T 2aty_A 259 A 259 (376)
T ss_pred C
Confidence 3
No 494
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.29 E-value=5.3e-07 Score=61.20 Aligned_cols=61 Identities=10% Similarity=0.163 Sum_probs=41.6
Q ss_pred CeEEEeeEeccC----CCEEEEEccC---CeEeec----ccCceEEe------eC--CcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYE----PSQLGWRFSN---NTVIAY----VKDLRIAL------SN--GSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P----~P~i~W~~~d---g~~i~~----~~~~~~~~------~~--GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.+.|.|.+.+.+ .+.|.|++.+ |+.+.. ..+..... .+ .+|.|.+++.+ |+|.|.
T Consensus 24 ~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~------DsG~Y~ 97 (120)
T 3noi_A 24 SAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGH------DASIYV 97 (120)
T ss_dssp CEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGG------GCEEEE
T ss_pred CEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChh------hCEEEE
Confidence 399999998876 6789999865 444331 11111111 22 38999988766 899999
Q ss_pred EEEEcC
Q psy5697 121 CRASNE 126 (145)
Q Consensus 121 C~A~N~ 126 (145)
|.+...
T Consensus 98 C~v~~~ 103 (120)
T 3noi_A 98 CRVEVL 103 (120)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999853
No 495
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.28 E-value=1.2e-06 Score=60.49 Aligned_cols=64 Identities=14% Similarity=0.056 Sum_probs=42.3
Q ss_pred eEEEeeEeccC-CCEEEEEccC-Ce---Ee-ec--------ccCceEEe--eC---CcEEEcCCCCCCCCCCCCCeEEEE
Q psy5697 61 GLELTRQTRYE-PSQLGWRFSN-NT---VI-AY--------VKDLRIAL--SN---GSLMFPPFPETGFRPDVHSTVYRC 121 (145)
Q Consensus 61 ~~L~C~a~G~P-~P~i~W~~~d-g~---~i-~~--------~~~~~~~~--~~---GsL~i~~~~~~~~~~~~d~G~Y~C 121 (145)
+.|.|.+.+.+ ...+.|++.+ |+ .+ .. .++..... .+ .+|.|.+++.+ |+|.|.|
T Consensus 19 vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~------Dsg~Y~C 92 (129)
T 3rrq_A 19 ATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRN------DSGTYLC 92 (129)
T ss_dssp EEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGG------GCEEEEE
T ss_pred EEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChh------HCEEEEE
Confidence 99999998876 5789998642 21 11 10 01111221 11 27999888765 8999999
Q ss_pred EEEcCCCce
Q psy5697 122 RASNEAGVI 130 (145)
Q Consensus 122 ~A~N~~G~~ 130 (145)
.+.|..+..
T Consensus 93 ~~~~~~~~~ 101 (129)
T 3rrq_A 93 GAISLAPKL 101 (129)
T ss_dssp EEEECGGGC
T ss_pred EEEecCCCc
Confidence 999988765
No 496
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.27 E-value=1.5e-06 Score=58.87 Aligned_cols=72 Identities=11% Similarity=0.092 Sum_probs=45.7
Q ss_pred eEEEeeEeccC---CCEEEEEccC-Ce-E--eec--------ccCce-EEeeCC--cEEEcCCCCCCCCCCCCCeEEEEE
Q psy5697 61 GLELTRQTRYE---PSQLGWRFSN-NT-V--IAY--------VKDLR-IALSNG--SLMFPPFPETGFRPDVHSTVYRCR 122 (145)
Q Consensus 61 ~~L~C~a~G~P---~P~i~W~~~d-g~-~--i~~--------~~~~~-~~~~~G--sL~i~~~~~~~~~~~~d~G~Y~C~ 122 (145)
+.|.|.+.+.+ .+.+.|++.. |+ + +.. .++.. ....++ +|.|.+++.+ |+|.|.|.
T Consensus 18 v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~------DsG~Y~C~ 91 (120)
T 1oaq_L 18 VTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTE------DEAIYFCA 91 (120)
T ss_dssp EEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGG------GCEEEEEE
T ss_pred EEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChh------hCeEEEEE
Confidence 99999999887 6899998742 22 1 110 11111 122233 7999988765 89999999
Q ss_pred EEcCCCceE--EEEEEEE
Q psy5697 123 ASNEAGVIL--SRFVHVK 138 (145)
Q Consensus 123 A~N~~G~~~--s~~v~v~ 138 (145)
+.|..+... ...+.|.
T Consensus 92 ~~~~~~~~fg~gt~L~V~ 109 (120)
T 1oaq_L 92 LWYSNHLVFGGGTKLTVL 109 (120)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EccCCCcEECCCEEEEEc
Confidence 998754322 2355554
No 497
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.27 E-value=1.8e-06 Score=57.77 Aligned_cols=72 Identities=10% Similarity=-0.032 Sum_probs=44.7
Q ss_pred CeEEEeeEecc--CCCEEEEEccC-------CeEe-------e-cccCceEEe-----eCCcEEEcCCCCCCCCCCCCCe
Q psy5697 60 RGLELTRQTRY--EPSQLGWRFSN-------NTVI-------A-YVKDLRIAL-----SNGSLMFPPFPETGFRPDVHST 117 (145)
Q Consensus 60 g~~L~C~a~G~--P~P~i~W~~~d-------g~~i-------~-~~~~~~~~~-----~~GsL~i~~~~~~~~~~~~d~G 117 (145)
.++|.|...+. ....+.|++.+ ...+ . ...+..... .+.+|.|.+++.+ |+|
T Consensus 14 ~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~------DsG 87 (115)
T 2or7_A 14 PVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVG------DGG 87 (115)
T ss_dssp CEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGG------GCE
T ss_pred CEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHH------HCE
Confidence 39999998753 35789999754 1111 1 011111111 1348999988766 899
Q ss_pred EEEEEEEcCCCceEEEEEEEE
Q psy5697 118 VYRCRASNEAGVILSRFVHVK 138 (145)
Q Consensus 118 ~Y~C~A~N~~G~~~s~~v~v~ 138 (145)
.|.|.+.+..... ...+.|.
T Consensus 88 ~Y~C~v~~~~~~~-~~~v~L~ 107 (115)
T 2or7_A 88 PYCCVVEIPGAFH-FVDYMLE 107 (115)
T ss_dssp EEEEEECCTTSCE-EEEEEEE
T ss_pred EEEEEEECCCcee-EEEEEEE
Confidence 9999998764433 4555555
No 498
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.26 E-value=3.6e-06 Score=56.45 Aligned_cols=60 Identities=8% Similarity=0.050 Sum_probs=41.0
Q ss_pred CeEEEeeEeccCCCEEEEEccC-Ce---Eee-c----------ccCceE-E---eeCCcEEEcCCCCCCCCCCCCCeEEE
Q psy5697 60 RGLELTRQTRYEPSQLGWRFSN-NT---VIA-Y----------VKDLRI-A---LSNGSLMFPPFPETGFRPDVHSTVYR 120 (145)
Q Consensus 60 g~~L~C~a~G~P~P~i~W~~~d-g~---~i~-~----------~~~~~~-~---~~~GsL~i~~~~~~~~~~~~d~G~Y~ 120 (145)
.++|.|...+.+.+.+.|++.+ |+ .+- . .+..+. . ..+ +|.|.++..+ |+|.|.
T Consensus 18 ~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~~~------Dsg~Y~ 90 (112)
T 1fo0_B 18 AVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVANMS------QGRTLY 90 (112)
T ss_dssp CEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEESCC------SCEEEE
T ss_pred cEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCCHh------HCEEEE
Confidence 3999999988888999999753 32 111 0 010111 1 123 8999988766 899999
Q ss_pred EEEEcC
Q psy5697 121 CRASNE 126 (145)
Q Consensus 121 C~A~N~ 126 (145)
|.+.+.
T Consensus 91 C~~~~~ 96 (112)
T 1fo0_B 91 CTCSAD 96 (112)
T ss_dssp EEEESS
T ss_pred EEEEcC
Confidence 999875
No 499
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.25 E-value=3.9e-06 Score=63.33 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=63.1
Q ss_pred eceee-eecCceeEeeccccC-----cccCCceeeeEE---EeccCCCCCCCEEEEcCCCCCccCeEEEeeEecc-CCC-
Q psy5697 5 HISTL-LADADTYIIADRSLF-----PRPLGYLVGNIV---YSSRSENEHYPFRIKSAPGGNRTRGLELTRQTRY-EPS- 73 (145)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~-----p~~~~~~~~~~~---~~~~~~~~~~P~~i~~p~~~~~~g~~L~C~a~G~-P~P- 73 (145)
+|+.+ ..|.++|.|...... ... ..+|..+ +........+|.+.... .++.|.|.+.|. |.|
T Consensus 78 ~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~--~~~g~gt~L~V~~~~~~~~~P~v~~~~-----~~~~L~C~~~g~~P~~i 150 (229)
T 1hxm_A 78 KILAPSERDEGSYYCACDTLGMGGEYTDK--LIFGKGTRVTVEPRSQPHTKPSVFVMK-----NGTNVACLVKEFYPKDI 150 (229)
T ss_dssp EESSCCGGGCEEEEEEEECCCCSSSCCCC--CEEBCCEEEEEECCSCCCBCCEEEEEE-----ETTEEEEEEESCBSSCC
T ss_pred EECcCCHhHCeEEEEEEecCCCcccccch--hhcCccEEEEEeccCCCCcCCcEEEcC-----CCCeEEEEEEEEeCCCE
Confidence 34444 678889999875431 111 1222211 11111223456433321 136899999985 554
Q ss_pred EEEEEccCCeEeecccCceEEeeCCcEEEcCCCCCCCCCCCCCeEEEEEEEcCCCce
Q psy5697 74 QLGWRFSNNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 130 (145)
Q Consensus 74 ~i~W~~~dg~~i~~~~~~~~~~~~GsL~i~~~~~~~~~~~~d~G~Y~C~A~N~~G~~ 130 (145)
+|+|++ | +.+...........+|++.+..... ..+.|.|.|.+.|..+..
T Consensus 151 ~v~W~~-~-~~~~~~~~~~~~~~dg~y~~~~~~~-----~~~~~~ytC~V~h~~~~~ 200 (229)
T 1hxm_A 151 RINLVS-S-KKITEFDPAIVISPSGKYNAVKLGK-----YEDSNSVTCSVQHDNKTV 200 (229)
T ss_dssp EEEEEC-S-SEEEECCCEEEECTTSSEEEEEEEE-----ETTTTTCEEEEEETTEEE
T ss_pred EEEEec-C-CEEecCccceEECCCCcEEEEECcc-----cCCCCcEEEEEEeCCCCc
Confidence 899975 5 5665332222334567877764321 126899999999998754
No 500
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.25 E-value=2e-06 Score=57.82 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=40.4
Q ss_pred CeEEEeeEecc-CCCEEEEEccC-CeE---eec-----------ccCceEEe---eCC--cEEEcCCCCCCCCCCCCCeE
Q psy5697 60 RGLELTRQTRY-EPSQLGWRFSN-NTV---IAY-----------VKDLRIAL---SNG--SLMFPPFPETGFRPDVHSTV 118 (145)
Q Consensus 60 g~~L~C~a~G~-P~P~i~W~~~d-g~~---i~~-----------~~~~~~~~---~~G--sL~i~~~~~~~~~~~~d~G~ 118 (145)
.++|.|.+.+. +.+.+.|++.+ |.. +.. .++..... .++ +|.|.+++.+ |+|.
T Consensus 17 ~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~------DsG~ 90 (116)
T 1tvd_A 17 EVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTE------DSAT 90 (116)
T ss_dssp CEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGG------GCEE
T ss_pred eEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChH------HCEE
Confidence 39999999875 67889998743 221 110 01111221 233 7999888765 8999
Q ss_pred EEEEEEcC
Q psy5697 119 YRCRASNE 126 (145)
Q Consensus 119 Y~C~A~N~ 126 (145)
|.|.+.|.
T Consensus 91 Y~C~~~~~ 98 (116)
T 1tvd_A 91 YYCAFTLP 98 (116)
T ss_dssp EEEEEECT
T ss_pred EEEEEeCC
Confidence 99999985
Done!