Your job contains 1 sequence.
>psy57
MEKEENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT
TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQ
KAWRQSQSNKPFSCE
The BLAST search returned 18 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy57
(135 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 532 2.8e-49 1
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 436 4.3e-39 1
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 436 4.3e-39 1
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 435 5.4e-39 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 435 5.5e-39 1
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 429 2.4e-38 1
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 426 4.9e-38 1
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 421 1.5e-37 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 419 2.4e-37 1
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 418 3.5e-37 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 416 5.1e-37 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 409 2.6e-36 1
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 400 2.5e-35 1
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 396 6.7e-35 1
UNIPROTKB|F1LXY9 - symbol:Lama2 "Protein Lama2" species:1... 298 1.5e-25 1
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 298 1.6e-24 1
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 298 1.6e-24 1
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 298 1.6e-24 1
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 297 2.0e-24 1
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 297 2.0e-24 1
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 297 2.0e-24 1
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 296 2.6e-24 1
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 296 2.6e-24 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 295 3.3e-24 1
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 294 4.1e-24 1
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 290 1.1e-23 1
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 290 1.1e-23 1
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 289 1.4e-23 1
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 289 1.4e-23 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 287 2.3e-23 1
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 275 4.4e-22 1
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 265 2.3e-21 1
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 268 2.4e-21 1
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 260 7.8e-21 1
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 258 1.2e-20 1
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 258 1.3e-20 1
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 256 2.1e-20 1
WB|WBGene00006746 - symbol:unc-6 species:6239 "Caenorhabd... 249 2.5e-20 1
UNIPROTKB|P34710 - symbol:unc-6 "Netrin unc-6" species:62... 249 2.5e-20 1
UNIPROTKB|F1SS89 - symbol:NTN1 "Netrin-1" species:9823 "S... 239 3.5e-20 1
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 253 4.3e-20 1
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 253 4.3e-20 1
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 248 1.4e-19 1
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 248 1.5e-19 1
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 247 1.8e-19 1
UNIPROTKB|F1N0T1 - symbol:Bt.54919 "Uncharacterized prote... 247 1.9e-19 1
ZFIN|ZDB-GENE-990415-168 - symbol:ntn1b "netrin 1b" speci... 240 2.3e-19 1
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 246 2.3e-19 1
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 246 2.4e-19 1
UNIPROTKB|Q2HXW4 - symbol:NTN1 "Netrin-1" species:9823 "S... 239 2.9e-19 1
UNIPROTKB|F1N0C7 - symbol:NTN1 "Uncharacterized protein" ... 239 2.9e-19 1
UNIPROTKB|F1PSP7 - symbol:NTN1 "Uncharacterized protein" ... 239 2.9e-19 1
UNIPROTKB|O95631 - symbol:NTN1 "Netrin-1" species:9606 "H... 239 2.9e-19 1
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 244 3.4e-19 1
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 243 4.9e-19 1
MGI|MGI:105088 - symbol:Ntn1 "netrin 1" species:10090 "Mu... 236 6.2e-19 1
RGD|619809 - symbol:Ntn1 "netrin 1" species:10116 "Rattus... 236 6.2e-19 1
UNIPROTKB|F1LPC8 - symbol:Ntn1 "Netrin-1" species:10116 "... 236 6.2e-19 1
UNIPROTKB|Q90922 - symbol:NTN1 "Netrin-1" species:9031 "G... 236 6.2e-19 1
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 242 6.6e-19 1
ZFIN|ZDB-GENE-990415-169 - symbol:ntn1a "netrin 1a" speci... 234 1.0e-18 1
UNIPROTKB|Q90923 - symbol:NTN3 "Netrin-3" species:9031 "G... 221 2.4e-17 1
ZFIN|ZDB-GENE-050310-2 - symbol:ntn2 "netrin 2" species:7... 214 1.4e-16 1
UNIPROTKB|E2R3Q6 - symbol:NTN3 "Uncharacterized protein" ... 203 2.1e-15 1
MGI|MGI:1341188 - symbol:Ntn3 "netrin 3" species:10090 "M... 203 2.1e-15 1
FB|FBgn0015773 - symbol:NetA "Netrin-A" species:7227 "Dro... 159 2.4e-15 2
RGD|619811 - symbol:Ntn3 "netrin 3" species:10116 "Rattus... 196 2.5e-15 1
UNIPROTKB|G3V6X3 - symbol:Ntn3 "Netrin 2-like (Chicken)" ... 198 7.2e-15 1
UNIPROTKB|G3N0E7 - symbol:NTN3 "Uncharacterized protein" ... 197 9.2e-15 1
UNIPROTKB|O00634 - symbol:NTN3 "Netrin-3" species:9606 "H... 196 1.2e-14 1
UNIPROTKB|F1SUI0 - symbol:NTN3 "Uncharacterized protein" ... 196 1.2e-14 1
ZFIN|ZDB-GENE-060503-794 - symbol:ush2a "Usher syndrome 2... 207 1.3e-14 1
UNIPROTKB|E1BP05 - symbol:USH2A "Uncharacterized protein"... 205 2.1e-14 1
UNIPROTKB|O75445 - symbol:USH2A "Usherin" species:9606 "H... 201 5.5e-14 1
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 191 9.5e-14 1
MGI|MGI:1341292 - symbol:Ush2a "Usher syndrome 2A (autoso... 196 1.9e-13 1
UNIPROTKB|F1MMK1 - symbol:LAMB3 "Uncharacterized protein"... 183 8.3e-13 1
UNIPROTKB|Q01635 - symbol:LAMB1 "Laminin subunit beta-1" ... 169 2.0e-12 1
UNIPROTKB|F1NZ77 - symbol:USH2A "Uncharacterized protein"... 186 2.1e-12 1
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 179 3.7e-12 1
UNIPROTKB|F1LZW7 - symbol:Ntng1 "Protein Ntng1" species:1... 165 4.2e-12 1
UNIPROTKB|F1PFM5 - symbol:LAMB3 "Uncharacterized protein"... 176 4.6e-12 1
UNIPROTKB|P07942 - symbol:LAMB1 "Laminin subunit beta-1" ... 178 4.7e-12 1
MGI|MGI:96743 - symbol:Lamb1 "laminin B1" species:10090 "... 178 4.7e-12 1
RGD|1306311 - symbol:Lamb1 "laminin, beta 1" species:1011... 178 4.8e-12 1
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 177 6.0e-12 1
RGD|628777 - symbol:Ush2a "Usher syndrome 2A (autosomal r... 176 6.3e-12 1
UNIPROTKB|A1A4H7 - symbol:MGC139448 "Uncharacterized prot... 169 6.3e-12 1
UNIPROTKB|F1S575 - symbol:NTNG2 "Uncharacterized protein"... 168 8.4e-12 1
UNIPROTKB|F1NK85 - symbol:NTN1 "Netrin-1" species:9031 "G... 164 9.9e-12 1
UNIPROTKB|F1NEW2 - symbol:NTN1 "Netrin-1" species:9031 "G... 164 1.0e-11 1
UNIPROTKB|Q9Y2I2 - symbol:NTNG1 "Netrin-G1" species:9606 ... 168 1.1e-11 1
UNIPROTKB|F1LYH8 - symbol:Ntng1 "Protein Ntng1" species:1... 165 1.1e-11 1
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 174 1.3e-11 1
RGD|1563465 - symbol:Ntng1 "netrin G1" species:10116 "Rat... 165 1.3e-11 1
UNIPROTKB|F1LX88 - symbol:Ntng1 "Protein Ntng1" species:1... 165 1.3e-11 1
UNIPROTKB|F1LYF9 - symbol:Ntng1 "Protein Ntng1" species:1... 165 1.4e-11 1
UNIPROTKB|F1LWK9 - symbol:Ntng1 "Protein Ntng1" species:1... 165 1.7e-11 1
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 172 2.0e-11 1
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 172 2.0e-11 1
WARNING: Descriptions of 53 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 532 (192.3 bits), Expect = 2.8e-49, P = 2.8e-49
Identities = 93/133 (69%), Positives = 108/133 (81%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I + LL+ RPS N+FNST LQEWTRATNVR+RLLRTKNLLGHLMS+A QDPT TR
Sbjct: 199 ENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTR 258
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRI-CRCQHNTCGHNCEVCCPGYEQKA 122
RYFYSIKDISIGGRC CNGHAD CD+ DP+ P + CRCQH+TCG C CCPG+EQK
Sbjct: 259 RYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKK 318
Query: 123 WRQSQSNKPFSCE 135
WRQ+ + +PF+CE
Sbjct: 319 WRQNTNARPFNCE 331
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 436 (158.5 bits), Expect = 4.3e-39, P = 4.3e-39
Identities = 76/132 (57%), Positives = 94/132 (71%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP NF S L+E+T+ATNVRLR LRT LLGHLM A +DPT TR
Sbjct: 226 ENGEIVVSLVNGRPGAMNFSYSPLLREFTKATNVRLRFLRTNTLLGHLMGKALRDPTVTR 285
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC C+GHAD CD DP DP+ C CQHNTCG C+ CCPG+ Q+ W
Sbjct: 286 RYYYSIKDISIGGRCVCHGHADACDAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPW 345
Query: 124 RQSQSNKPFSCE 135
+ + +N C+
Sbjct: 346 KPATANSANECQ 357
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 436 (158.5 bits), Expect = 4.3e-39, P = 4.3e-39
Identities = 77/133 (57%), Positives = 98/133 (73%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMAD-QDPTTT 62
E ++ I +L+HRPS + F S LQ +TRATNVRLRLL T+ L GHLM M + +DPT T
Sbjct: 223 ENAEMVIRILEHRPSSRQFATSEALQNFTRATNVRLRLLGTRTLQGHLMDMNEWRDPTVT 282
Query: 63 RRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKA 122
RRYFY+IK+I IGGRC CNGHA CDIL+P+ P +CRC+HNTCG CE CCPG+ QK
Sbjct: 283 RRYFYAIKEIMIGGRCVCNGHAVTCDILEPQRPKSLLCRCEHNTCGDMCERCCPGFVQKQ 342
Query: 123 WRQSQSNKPFSCE 135
W+ + ++ F+CE
Sbjct: 343 WQAATAHNNFTCE 355
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 435 (158.2 bits), Expect = 5.4e-39, P = 5.4e-39
Identities = 75/132 (56%), Positives = 96/132 (72%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP NF S L+++T+ATN+RLR LRT LLGHLM A +DPT TR
Sbjct: 208 ENGEIVVSLVNGRPGAMNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTR 267
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC C+GHADVCD DP DP+ C CQHNTCG +C+ CCPG+ Q+ W
Sbjct: 268 RYYYSIKDISIGGRCVCHGHADVCDAKDPTDPFRLQCACQHNTCGGSCDRCCPGFNQQPW 327
Query: 124 RQSQSNKPFSCE 135
R + ++ C+
Sbjct: 328 RPATTDSANECQ 339
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 435 (158.2 bits), Expect = 5.5e-39, P = 5.5e-39
Identities = 74/132 (56%), Positives = 97/132 (73%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP +NF S L+++T+ATN+RLR LRT LLGHLM A +DPT TR
Sbjct: 230 ENGEIVVSLVNGRPGARNFSYSPVLRDFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTR 289
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC C+GHADVCD DP DP+ C CQHNTCG +C+ CCPG+ Q+ W
Sbjct: 290 RYYYSIKDISIGGRCVCHGHADVCDAKDPSDPFRLQCACQHNTCGGSCDRCCPGFNQQPW 349
Query: 124 RQSQSNKPFSCE 135
+ + ++ C+
Sbjct: 350 KPATTDSANECQ 361
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 429 (156.1 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 74/132 (56%), Positives = 96/132 (72%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP NF S L+++T+ATN+RLR LRT LLGHLM A +DPT TR
Sbjct: 231 ENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTR 290
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC C+GHADVCD DP DP+ C CQHNTCG +C+ CCPG+ Q+ W
Sbjct: 291 RYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPW 350
Query: 124 RQSQSNKPFSCE 135
+ + ++ C+
Sbjct: 351 KPATTDSANECQ 362
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 426 (155.0 bits), Expect = 4.9e-38, P = 4.9e-38
Identities = 74/132 (56%), Positives = 94/132 (71%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP NF S L+ +T+ATN+RLR L+T LLGHLM A +DPT TR
Sbjct: 208 ENGEIVVSLVNGRPGAMNFSYSPLLRNFTKATNIRLRFLQTNTLLGHLMGKALRDPTVTR 267
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC C+GHADVCD DP DPY C CQHNTCG +C+ CCPG+ Q W
Sbjct: 268 RYYYSIKDISIGGRCVCHGHADVCDAKDPSDPYRLQCDCQHNTCGGSCDRCCPGFNQFPW 327
Query: 124 RQSQSNKPFSCE 135
+ + ++ C+
Sbjct: 328 KPATADSANECQ 339
Score = 104 (41.7 bits), Expect = 0.00074, P = 0.00074
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 65 YFYSIKDISIGG--RCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGY 118
Y+ K + +G C CNGH+D C L P IC CQHNT G +CE C GY
Sbjct: 1826 YYRDTKGLFLGKCIPCHCNGHSDQC--L----PGSGICLNCQHNTEGDHCEQCKDGY 1876
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 421 (153.3 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 74/132 (56%), Positives = 93/132 (70%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP KNF S L+E+T+ATN+RL LRT LLGHL+S A +DPT TR
Sbjct: 222 ENGEIVVSLVNGRPGAKNFTYSPSLREFTKATNIRLHFLRTNTLLGHLISKAQRDPTVTR 281
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC C+GHA+VC+ E+ Y C CQHNTCG C+ CCPGY QK W
Sbjct: 282 RYYYSIKDISIGGRCVCHGHAEVCNAKSAENQYQFHCECQHNTCGETCDRCCPGYNQKQW 341
Query: 124 RQSQSNKPFSCE 135
+ + + CE
Sbjct: 342 QPATAGNINICE 353
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 419 (152.6 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 74/132 (56%), Positives = 94/132 (71%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E ++ +SL++ RP KNF S L+E+T+ATN+RLR LRT LLGHL+S A +DPT TR
Sbjct: 128 ENGEVVVSLINGRPGAKNFTFSHALREFTKATNIRLRFLRTNTLLGHLISKAQRDPTVTR 187
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC CNGHA+VC+ +PE + C CQHNTCG C+ CC GY Q+ W
Sbjct: 188 RYYYSIKDISIGGRCVCNGHAEVCNANNPEKLFR--CECQHNTCGDTCDRCCMGYNQRRW 245
Query: 124 RQSQSNKPFSCE 135
R + + CE
Sbjct: 246 RPATGKQSNECE 257
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 418 (152.2 bits), Expect = 3.5e-37, P = 3.5e-37
Identities = 73/132 (55%), Positives = 92/132 (69%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP NF S L+E+T+ATN+RLR LRT LLGHLM +DPT TR
Sbjct: 218 ENGEIVVSLVNGRPGAMNFSYSPVLREFTKATNIRLRFLRTNTLLGHLMGKTLRDPTVTR 277
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
+Y+YSIKDISIGGRC CNGHA+ C+ DP DPY C CQHNTCG +C+ CCPG+ Q W
Sbjct: 278 KYYYSIKDISIGGRCVCNGHAEACNAQDPNDPYKLQCDCQHNTCGTSCDGCCPGFNQFPW 337
Query: 124 RQSQSNKPFSCE 135
+ + + CE
Sbjct: 338 KPATTYSANECE 349
Score = 105 (42.0 bits), Expect = 0.00058, P = 0.00058
Identities = 26/73 (35%), Positives = 34/73 (46%)
Query: 65 YFYSIKDISIGG--RCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQK 121
Y+ K + +G C CNGH+D C LD IC C+HNT G++CE C G+
Sbjct: 1828 YYRDNKGLFLGKCVPCNCNGHSDQC--LDGSG----ICVNCRHNTAGNHCEKCLGGFHHN 1881
Query: 122 AWRQSQSNKPFSC 134
S SC
Sbjct: 1882 NTVDGHSVSCSSC 1894
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 416 (151.5 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 73/132 (55%), Positives = 95/132 (71%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E ++ +SL++ RP KNF S L+E+T+ATN+RLR LRT LLGHL+S A +DPT TR
Sbjct: 225 ENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLRFLRTNTLLGHLISKAQRDPTVTR 284
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGG+C CNGHA+VC+I +PE + C CQH+TCG C+ CC GY Q+ W
Sbjct: 285 RYYYSIKDISIGGQCVCNGHAEVCNINNPEKLFR--CECQHHTCGETCDRCCTGYNQRRW 342
Query: 124 RQSQSNKPFSCE 135
R + + CE
Sbjct: 343 RPAAWEQSHECE 354
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 409 (149.0 bits), Expect = 2.6e-36, P = 2.6e-36
Identities = 71/132 (53%), Positives = 94/132 (71%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP K+F S L+E+T+ATN+RLR LRT LLGHL+S A++DPT TR
Sbjct: 128 ENGEIVVSLINGRPGAKHFAFSDTLREFTKATNIRLRFLRTNTLLGHLISKAERDPTVTR 187
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDIS+GGRC CNGHA+ C +PE + C+CQH+TCG C CC GY Q+ W
Sbjct: 188 RYYYSIKDISVGGRCVCNGHAEACSADNPEKQFR--CKCQHHTCGDTCNRCCAGYNQRPW 245
Query: 124 RQSQSNKPFSCE 135
R + ++ CE
Sbjct: 246 RPAAQDQHNECE 257
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 400 (145.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 70/132 (53%), Positives = 91/132 (68%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E +I +SL++ RP K F S L+E+T+ATN+RLR LRT LLGHL+S A++DPT TR
Sbjct: 222 ENGEIVVSLINGRPGAKKFAFSDTLREFTKATNIRLRFLRTNTLLGHLISKAERDPTVTR 281
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDIS+GGRC CNGHA+ C +PE + C CQH+TCG C CC GY Q+ W
Sbjct: 282 RYYYSIKDISVGGRCVCNGHAEACSADNPEKQFR--CECQHHTCGDTCNRCCAGYNQRRW 339
Query: 124 RQSQSNKPFSCE 135
+ + + CE
Sbjct: 340 QPAGQEQHNECE 351
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 396 (144.5 bits), Expect = 6.7e-35, P = 6.7e-35
Identities = 73/134 (54%), Positives = 94/134 (70%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E ++ +SL++ RP KNF S L+E+T+ATN+RL LRT LLGHL+S A +DPT TR
Sbjct: 225 ENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLCFLRTNTLLGHLISKAQRDPTVTR 284
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
RY+YSIKDISIGGRC CNGHA C+ +PE + C CQH+TCG C+ CC GY Q+ W
Sbjct: 285 RYYYSIKDISIGGRCVCNGHAQECNANNPEKLFQ--CECQHHTCGKTCDRCCAGYNQRRW 342
Query: 124 RQS---QSNKPFSC 134
R + QSN+ +C
Sbjct: 343 RPATWEQSNECEAC 356
>UNIPROTKB|F1LXY9 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005605 "basal lamina" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] RGD:1308889 GO:GO:0007411 GO:GO:0042383
GO:GO:0005605 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
IPI:IPI00781912 Ensembl:ENSRNOT00000061512 ArrayExpress:F1LXY9
Uniprot:F1LXY9
Length = 661
Score = 298 (110.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 172 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 229
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 230 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPATNKSR-CECEHNTCGESCDRCCPGF 287
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 288 HQKPWRAGTFLTKTECE 304
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 298 (110.0 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 173 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 230
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 231 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPATNKSR-CECEHNTCGESCDRCCPGF 288
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 289 HQKPWRAGTFLTKTECE 305
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 298 (110.0 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 206 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 263
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 264 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPATNKSR-CECEHNTCGESCDRCCPGF 321
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 322 HQKPWRAGTFLTKSECE 338
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 298 (110.0 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 210 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 267
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 268 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPATNKSR-CECEHNTCGDSCDQCCPGF 325
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 326 HQKPWRAGTFLTKTECE 342
Score = 105 (42.0 bits), Expect = 0.00049, P = 0.00049
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 78 CRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGY 118
C+CNGH+ +CD PE IC+ CQH+T G CE C GY
Sbjct: 1420 CQCNGHSSLCD---PETS---ICQNCQHHTAGDFCERCALGY 1455
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 297 (109.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 173 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 230
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 231 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPVTNKSR-CECEHNTCGDSCDQCCPGF 288
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 289 HQKPWRAGTFLTKSECE 305
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 297 (109.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 173 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 230
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 231 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPVTNKSR-CECEHNTCGDSCDQCCPGF 288
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 289 HQKPWRAGTFLTKTECE 305
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 297 (109.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I ISL++ RPS + S L E+T A +RLR R + L LM A +DP
Sbjct: 178 ENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 235
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YS+KDIS+GG C C GHA C LDP R C C+HNTCG +C+ CCPG+
Sbjct: 236 PIVTRRYYYSVKDISVGGMCICYGHARACP-LDPVTNKSR-CECEHNTCGDSCDQCCPGF 293
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR CE
Sbjct: 294 HQKPWRAGTFLTKTECE 310
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 296 (109.3 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/137 (44%), Positives = 83/137 (60%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L E+T A +RLRL R + L LM+++ D D
Sbjct: 200 EHGEIHTSLINGRPSADD--PSPQLLEFTSARYIRLRLQRIRTLNADLMTLSHRDLRDLD 257
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C+GHA C D E+ C+C+HNTCG +C+ CCPG+
Sbjct: 258 PIVTRRYYYSIKDISVGGMCICSGHASSCP-WD-EEAKQLQCQCEHNTCGESCDRCCPGF 315
Query: 119 EQKAWRQSQSNKPFSCE 135
Q+ WR + CE
Sbjct: 316 HQQPWRPGTISSSNQCE 332
Score = 118 (46.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 66 FYSIKDISIGGRCR---CNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQK 121
+Y + I GG C+ C+GH+ CDI H IC C HNT G +CE C PG+
Sbjct: 734 YYRVDGILFGGICQPCECHGHSSECDI-------HGICSGCTHNTTGDHCEQCLPGFYGT 786
Query: 122 AWRQSQSN-KPFSC 134
R + + +P +C
Sbjct: 787 PSRGTPGDCQPCAC 800
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 296 (109.3 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 62/137 (45%), Positives = 82/137 (59%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L E+T A +RLRL R + L LM+++ D D
Sbjct: 200 EHGEIHTSLINGRPSADD--PSPQLLEFTSARYIRLRLQRIRTLNADLMTLSHRDLRDLD 257
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C GHA C D E+ C+C+HNTCG +C+ CCPGY
Sbjct: 258 PIVTRRYYYSIKDISVGGMCICYGHASSCP-WD-EEAKQLQCQCEHNTCGESCDRCCPGY 315
Query: 119 EQKAWRQSQSNKPFSCE 135
Q+ WR + CE
Sbjct: 316 HQQPWRPGTISSGNECE 332
Score = 121 (47.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 66 FYSIKDISIGGRCR---CNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQK 121
+Y + I GG C+ C+GHA CDI H IC C HNT G +CE C PG+
Sbjct: 734 YYRVDGILFGGICQPCECHGHASECDI-------HGICSVCTHNTTGDHCEQCLPGFYGT 786
Query: 122 AWRQSQSN-KPFSC 134
R + + +P +C
Sbjct: 787 PSRGTPGDCQPCAC 800
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 295 (108.9 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 62/137 (45%), Positives = 78/137 (56%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPT--- 60
E +I SL++ RPS + S L E+T A +RLR R + L LM A +DPT
Sbjct: 172 ENGEIHTSLINGRPSADD--PSRTLLEFTSARFIRLRFQRIRTLNADLMMFAHKDPTEID 229
Query: 61 --TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
TRRY+YSIKDIS+GG C C+GHA C LDP +C+C+HNTCG C+ CCPG+
Sbjct: 230 PIVTRRYYYSIKDISVGGMCICSGHAKACP-LDPVTN-KSVCQCEHNTCGETCDRCCPGF 287
Query: 119 EQKAWRQSQSNKPFSCE 135
QK W CE
Sbjct: 288 NQKPWHAGTFLVKHQCE 304
Score = 105 (42.0 bits), Expect = 0.00049, P = 0.00049
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 78 CRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
C+C+GH+ +CD P +C+ CQHNT G +CE C G+ + +P +C
Sbjct: 1385 CQCHGHSTMCD------PKTSVCQNCQHNTAGQHCERCALGFYGIIQGSPEDCQPCAC 1436
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 294 (108.6 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 63/137 (45%), Positives = 81/137 (59%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L E+T A +RLRL R + L LM+++ D D
Sbjct: 146 EHGEIHTSLINGRPSADDL--SPKLLEFTSARYIRLRLQRIRTLNADLMTLSHRDPIDLD 203
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDISIGG C C GHA C D E C+C+HNTCG +C CCPGY
Sbjct: 204 PIVTRRYYYSIKDISIGGMCICYGHASSCP-WD-ETTKKLQCQCEHNTCGESCSRCCPGY 261
Query: 119 EQKAWRQSQSNKPFSCE 135
Q+ WR + +CE
Sbjct: 262 HQQPWRPGTVSAGNTCE 278
Score = 122 (48.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
C CN H+D CD PE + C H+T G +C+VC PGY K + P +C
Sbjct: 1356 CNCNNHSDACD---PETG--KCLNCSHSTTGEHCDVCAPGYYGKVTGSASDCSPCAC 1407
Score = 119 (46.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 66 FYSIKDISIGGRCR---CNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGY 118
+Y + I GG C+ C+GHA CDI H +C C+HNT G +CE C PG+
Sbjct: 680 YYRVDGILFGGICQPCECHGHAAECDI-------HGVCSVCKHNTTGDHCEQCAPGF 729
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 290 (107.1 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 59/137 (43%), Positives = 80/137 (58%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L ++T A +RLRL R + L LM+++ D D
Sbjct: 194 EHGEIHTSLINGRPSSDDL--SPKLLDFTSARYIRLRLQRIRTLNADLMTLSHRDPKDLD 251
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C GHA C + + C+C+HNTCG C CCPGY
Sbjct: 252 PIVTRRYYYSIKDISVGGMCICYGHASSCPWDEGTKKFQ--CQCEHNTCGDRCNRCCPGY 309
Query: 119 EQKAWRQSQSNKPFSCE 135
Q+ WR + +CE
Sbjct: 310 HQQPWRPGTVSSGNTCE 326
Score = 122 (48.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 66 FYSIKDISIGGRCR---CNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQK 121
+Y + I GG C+ C+GHA CD+ H +C CQHNT G +CE C PG+
Sbjct: 682 YYRVDGILFGGICQPCECHGHAAECDV-------HGVCFACQHNTTGEHCERCLPGFYGL 734
Query: 122 AWRQSQSN-KPFSC 134
R + + +P +C
Sbjct: 735 PSRGTPGDCQPCAC 748
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
C CN H+D CD PE + C HNT G +C+ C PGY K + P +C
Sbjct: 1357 CNCNNHSDTCD---PETG--KCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCTC 1408
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 290 (107.1 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 61/137 (44%), Positives = 81/137 (59%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQ-----D 58
E +I SL++ RPS + S +L E+T A +RLRL R + L LM+++ + D
Sbjct: 193 EHGEIHTSLINGRPSADDL--SPKLLEFTSARYIRLRLQRIRTLNADLMTLSHREPKELD 250
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C GHA C D E C+C+HNTCG +C CCPGY
Sbjct: 251 PIVTRRYYYSIKDISVGGMCICYGHASSCP-WD-ETTKKLQCQCEHNTCGESCNRCCPGY 308
Query: 119 EQKAWRQSQSNKPFSCE 135
Q+ WR + +CE
Sbjct: 309 HQQPWRPGTVSSGNTCE 325
Score = 112 (44.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 66 FYSIKDISIGGRCR---CNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQK 121
+Y + I GG C+ C+GHA C++ H +C C HNT G +CE C PG+ +
Sbjct: 727 YYRVDGILFGGICQPCECHGHAAECNV-------HGVCIACAHNTTGVHCEQCLPGFYGE 779
Query: 122 AWRQSQSN-KPFSC 134
R + + +P +C
Sbjct: 780 PSRGTPGDCQPCAC 793
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 289 (106.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 62/137 (45%), Positives = 81/137 (59%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L ++T A +RLRL R + L LM+++ + D
Sbjct: 174 EHGEIHTSLINGRPSADD--PSQKLLDFTSARYIRLRLQRIRTLNADLMTLSHHDPKELD 231
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C GHA C LD E C+C+HNTCG +C CCPGY
Sbjct: 232 PIVTRRYYYSIKDISVGGMCICYGHARSCP-LD-EITKKLQCQCEHNTCGESCNRCCPGY 289
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR + CE
Sbjct: 290 HQKPWRPGTISAGNKCE 306
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 66 FYSIKDISIGG---RCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPG-YEQ 120
+Y + I GG C+CNGHA CD +C CQHNT G C+ C PG Y
Sbjct: 708 YYRVDGILFGGICQPCKCNGHATECDT-------QGVCFACQHNTTGPFCDQCLPGFYGS 760
Query: 121 KAWRQSQSNKPFSC 134
+ + +P +C
Sbjct: 761 PSQGTPEDCQPCAC 774
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 289 (106.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 62/137 (45%), Positives = 81/137 (59%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L ++T A +RLRL R + L LM+++ + D
Sbjct: 174 EHGEIHTSLINGRPSADD--PSQKLLDFTSARYIRLRLQRIRTLNADLMTLSHHDPKELD 231
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C GHA C LD E C+C+HNTCG +C CCPGY
Sbjct: 232 PIVTRRYYYSIKDISVGGMCICYGHARSCP-LD-EITKKLQCQCEHNTCGESCNRCCPGY 289
Query: 119 EQKAWRQSQSNKPFSCE 135
QK WR + CE
Sbjct: 290 HQKPWRPGTISAGNKCE 306
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 66 FYSIKDISIGG---RCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPG-YEQ 120
+Y + I GG C+CNGHA CD +C CQHNT G C+ C PG Y
Sbjct: 708 YYRVDGILFGGICQPCKCNGHATECDT-------QGVCFACQHNTTGPFCDQCLPGFYGS 760
Query: 121 KAWRQSQSNKPFSC 134
+ + +P +C
Sbjct: 761 PSQGTPEDCQPCAC 774
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 287 (106.1 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 61/139 (43%), Positives = 81/139 (58%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + + L E+T A +RLRL R + L LM+++ D D
Sbjct: 200 EHGEIHTSLINGRPSADDL--TPELLEFTSARFIRLRLQRIRTLNADLMTLSYRDPKDVD 257
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRI--CRCQHNTCGHNCEVCCP 116
P TRRY+YSIKDIS+GG C C GHA C P DP + C C+HNTCG +C CCP
Sbjct: 258 PIVTRRYYYSIKDISVGGMCICYGHAQSC----PWDPVTKKLQCVCEHNTCGESCNECCP 313
Query: 117 GYEQKAWRQSQSNKPFSCE 135
GY Q+ W+ + +CE
Sbjct: 314 GYHQEPWQPGTLSDGNTCE 332
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 275 (101.9 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 59/136 (43%), Positives = 80/136 (58%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSM---ADQ-DP 59
E +I SL++ RP +N S LQ++TRA VRLRL+ + L LM + +D D
Sbjct: 220 ENGEIHTSLVNGRPGAEN--TSLELQKFTRARFVRLRLISPRTLNADLMIINKKSDSLDK 277
Query: 60 TTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYE 119
+ T RYFYSI DISIGG+C C GHA+ C DP + C C+HNTCG +C CCP +
Sbjct: 278 SVTMRYFYSISDISIGGQCICYGHAESCPS-DPVTGQFK-CECRHNTCGESCNRCCPLFN 335
Query: 120 QKAWRQSQSNKPFSCE 135
Q W+ ++ P C+
Sbjct: 336 QLPWKPGTNSHPNVCQ 351
Score = 108 (43.1 bits), Expect = 0.00023, P = 0.00023
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 63 RRYFYSIKDISIGG---RCRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGY 118
R Y DI++ G C C+GH+ C+ P +C C+HNT G CE C PGY
Sbjct: 1522 REYLNQADDIALIGWSEPCSCHGHSQTCN------PDTSVCTDCEHNTFGDFCEHCLPGY 1575
Query: 119 EQKAWRQSQSNKPFSC 134
A R+ +N C
Sbjct: 1576 IGDA-REGGANACTKC 1590
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 265 (98.3 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 51/128 (39%), Positives = 74/128 (57%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQ+W AT++R+ L R N G + DP + Y+Y
Sbjct: 204 VAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRL-NTFGDEVF---NDPKVLKSYYY 259
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHR-ICRCQHNTCGHNCEVCCPGYEQKAWRQS 126
+I D ++GGRC+CNGHA C ++ Y + +C C+HNT G +C VC P Y + WR++
Sbjct: 260 AISDFAVGGRCKCNGHASEC----VKNEYSKLVCNCKHNTEGADCNVCKPFYNDRPWRRA 315
Query: 127 QSNKPFSC 134
+ P C
Sbjct: 316 TAENPNEC 323
Score = 127 (49.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/70 (40%), Positives = 36/70 (51%)
Query: 49 GHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCG 108
G+L +Q RR ++ S RC CNGH+D CD PE +C CQHNT G
Sbjct: 679 GYLGQHCEQCDQGFRRSRPELRRFSTCERCNCNGHSDTCD---PETG---MCNCQHNTAG 732
Query: 109 HNCEVCCPGY 118
+CE C G+
Sbjct: 733 LSCERCKDGF 742
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 268 (99.4 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 55/125 (44%), Positives = 72/125 (57%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S L +T A +RL+ R + L LM++A D D
Sbjct: 195 ENGEIHTSLINGRPSADD--PSPTLLNFTSARFIRLQFQRIRTLNADLMTLALHDPRDID 252
Query: 59 PTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
P TRRY+YSIKDIS+GG C C GHA C + + C C+HNTCG +C+ CCP Y
Sbjct: 253 PIVTRRYYYSIKDISVGGMCICYGHAKACPLNTHTKKFS--CECEHNTCGESCDRCCPAY 310
Query: 119 EQKAW 123
QK W
Sbjct: 311 NQKPW 315
Score = 122 (48.0 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 77 RCRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
RC+CNGH+D CD PE IC+ CQHNT G CE C G+ + KP +C
Sbjct: 1396 RCQCNGHSDSCD---PETS---ICQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCAC 1448
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 260 (96.6 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 50/128 (39%), Positives = 73/128 (57%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + DP + Y+Y
Sbjct: 219 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRL-NTFGDEVF---NDPKVLKSYYY 274
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+I D ++GGRC+CNGHA C + + D +C C+HNT G +CE C P + + WR++
Sbjct: 275 AISDFAVGGRCKCNGHASEC-VKNEFDKL--VCNCKHNTYGVDCEKCLPFFNDRPWRRAT 331
Query: 128 SNKPFSCE 135
+ C+
Sbjct: 332 AESASECQ 339
Score = 113 (44.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
C CNGH++ CD PE +C C+ NT G NCE C GY
Sbjct: 723 CTCNGHSETCD---PESG---VCNCRDNTAGPNCEKCSDGY 757
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 258 (95.9 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 50/127 (39%), Positives = 72/127 (56%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + DP + Y+Y
Sbjct: 98 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRL-NTFGDEVF---NDPKVLKSYYY 153
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+I D ++GGRC+CNGHA C + + D +C C+HNT G +CE C P + + WR++
Sbjct: 154 AISDFAVGGRCKCNGHASEC-VKNEFDKL--VCNCKHNTYGVDCEKCLPFFNDRPWRRAT 210
Query: 128 SNKPFSC 134
+ C
Sbjct: 211 AESASEC 217
Score = 110 (43.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH++ CD PE +C C+ NT G +CE C GY + S S+ +P C
Sbjct: 602 CTCNGHSETCD---PETG---VCDCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPCPC 653
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 258 (95.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 50/127 (39%), Positives = 72/127 (56%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + DP + Y+Y
Sbjct: 219 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRL-NTFGDEVF---NDPKVLKSYYY 274
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+I D ++GGRC+CNGHA C + + D +C C+HNT G +CE C P + + WR++
Sbjct: 275 AISDFAVGGRCKCNGHASEC-VKNEFDKL--VCNCKHNTYGVDCEKCLPFFNDRPWRRAT 331
Query: 128 SNKPFSC 134
+ C
Sbjct: 332 AESASEC 338
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
C CNGH++ CD PE +C C+ NT G +CE C GY
Sbjct: 723 CTCNGHSETCD---PETG---VCNCRDNTAGPHCEKCSDGY 757
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 256 (95.2 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 50/127 (39%), Positives = 72/127 (56%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + DP + Y+Y
Sbjct: 220 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRL-NTFGDEVF---NDPKVLKSYYY 275
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+I D ++GGRC+CNGHA C + + D +C C+HNT G +CE C P + + WR++
Sbjct: 276 AISDFAVGGRCKCNGHASEC-MKNEFDKL--VCNCKHNTYGVDCEKCLPFFNDRPWRRAT 332
Query: 128 SNKPFSC 134
+ C
Sbjct: 333 AESASEC 339
Score = 109 (43.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH++ CD PE +C C+ NT G +CE C GY + + S+ +P C
Sbjct: 724 CACNGHSETCD---PETG---VCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPC 775
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 249 (92.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 49/137 (35%), Positives = 76/137 (55%)
Query: 6 NKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQ-------- 57
N++ L++RPS +NF NS LQ+W AT++++ R L +++
Sbjct: 211 NRVAFPFLENRPSAQNFENSPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNET 270
Query: 58 DPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPG 117
D +RYFYS+ ++++GGRC+CNGHA C I D Y C C+HNT G CE+C P
Sbjct: 271 DDEVKQRYFYSMGELAVGGRCKCNGHASRC-IFDKMGRY--TCDCKHNTAGTECEMCKPF 327
Query: 118 YEQKAWRQSQSNKPFSC 134
+ + W ++ +N SC
Sbjct: 328 HYDRPWGRATANSANSC 344
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 249 (92.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 49/137 (35%), Positives = 76/137 (55%)
Query: 6 NKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQ-------- 57
N++ L++RPS +NF NS LQ+W AT++++ R L +++
Sbjct: 211 NRVAFPFLENRPSAQNFENSPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNET 270
Query: 58 DPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPG 117
D +RYFYS+ ++++GGRC+CNGHA C I D Y C C+HNT G CE+C P
Sbjct: 271 DDEVKQRYFYSMGELAVGGRCKCNGHASRC-IFDKMGRY--TCDCKHNTAGTECEMCKPF 327
Query: 118 YEQKAWRQSQSNKPFSC 134
+ + W ++ +N SC
Sbjct: 328 HYDRPWGRATANSANSC 344
>UNIPROTKB|F1SS89 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0060603 "mammary gland duct morphogenesis" evidence=IEA]
[GO:0045773 "positive regulation of axon extension" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0030517
"negative regulation of axon extension" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0005604 GO:GO:0040023 GO:GO:0030517
GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00690000102103 EMBL:CU656027
Ensembl:ENSSSCT00000019582 OMA:PTRATIS Uniprot:F1SS89
Length = 356
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/129 (36%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 FYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 253 (94.1 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 49/128 (38%), Positives = 73/128 (57%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + DP + Y+Y
Sbjct: 218 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRL-NTFGDEVF---NDPKVLKSYYY 273
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHR-ICRCQHNTCGHNCEVCCPGYEQKAWRQS 126
+I D ++GGRC+CNGHA C ++ + + +C C+HNT G +CE C P + + WR++
Sbjct: 274 AISDFAVGGRCKCNGHASEC----VKNEFGKLVCNCKHNTYGVDCEKCLPFFNDRPWRRA 329
Query: 127 QSNKPFSC 134
+ C
Sbjct: 330 TAESANQC 337
Score = 106 (42.4 bits), Expect = 0.00019, P = 0.00019
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH++ CD PE +C C+ NT G +CE C GY + + S+ +P C
Sbjct: 722 CTCNGHSETCD---PETG---VCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC 773
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 253 (94.1 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 50/127 (39%), Positives = 71/127 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + DP + Y+Y
Sbjct: 219 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVSLNRL-NTFGDEVF---NDPKVLKSYYY 274
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+I D ++GGRC+CNGHA C I + +C C+HNT G +CE C P + + WR++
Sbjct: 275 AISDFAVGGRCKCNGHASEC-IRNELGKL--VCNCKHNTFGDDCEKCLPFFNDRPWRRAT 331
Query: 128 SNKPFSC 134
+ C
Sbjct: 332 AESANEC 338
Score = 104 (41.7 bits), Expect = 0.00031, P = 0.00031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
C CNGH++ CD PE +C C+ NT G +CE C GY
Sbjct: 723 CTCNGHSETCD---PETG---MCDCRDNTAGSHCEKCSDGY 757
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 248 (92.4 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 48/127 (37%), Positives = 69/127 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF S LQEW +T + + L R N G + +DP + Y+Y
Sbjct: 211 VAFSTLEGRPSAYNFEESPVLQEWVTSTELLISLDRL-NTFGDDIF---KDPKVLQSYYY 266
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
++ D S+GGRC+CNGHA C P++ CRCQHNT G +CE C P ++ + W +
Sbjct: 267 AVSDFSVGGRCKCNGHASECG---PDEEGQLACRCQHNTTGPDCERCLPFFQDRPWARGT 323
Query: 128 SNKPFSC 134
+ C
Sbjct: 324 AEAANEC 330
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 248 (92.4 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 51/128 (39%), Positives = 69/128 (53%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
I S L+ RPS F S LQ+W A+ +R+ L R N G + +DP R Y+Y
Sbjct: 221 IAFSTLEGRPSAHAFEESEVLQKWVTASAIRISLNRM-NTFGDEVF---KDPQVLRSYYY 276
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHR-ICRCQHNTCGHNCEVCCPGYEQKAWRQS 126
+I D ++GGRC+CNGHA C D +R +CRC+HNT G +C C P Y + WR
Sbjct: 277 AISDFAVGGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSG 336
Query: 127 QSNKPFSC 134
S + C
Sbjct: 337 TSVEANEC 344
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 247 (92.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 48/127 (37%), Positives = 69/127 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF S LQEW +T++ + L R N G + +DP + Y+Y
Sbjct: 214 VAFSTLEGRPSAYNFEESPVLQEWVTSTDILISLDRL-NTFGDDIF---KDPRVLQSYYY 269
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
++ D S+GGRC+CNGHA C+ P CRCQHNT G +CE C P ++ + W +
Sbjct: 270 AVSDFSVGGRCKCNGHASECE---PNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGT 326
Query: 128 SNKPFSC 134
+ C
Sbjct: 327 AEDANEC 333
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 247 (92.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 48/127 (37%), Positives = 69/127 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF S LQEW +T + + L R N G + +DP + Y+Y
Sbjct: 218 VAFSTLEGRPSAYNFEESPVLQEWVTSTELLVSLDRL-NTFGDDIF---KDPKVLQSYYY 273
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
++ D S+GGRC+CNGHA C P++ CRCQHNT G +CE C P ++ + W +
Sbjct: 274 AVSDFSVGGRCKCNGHASECG---PDEEGRLACRCQHNTTGTDCERCLPFFQDRPWARGT 330
Query: 128 SNKPFSC 134
+ C
Sbjct: 331 AEAANEC 337
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 240 (89.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 48/129 (37%), Positives = 74/129 (57%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++++ T N L H ++D + R Y
Sbjct: 217 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIKV----TFNRL-HTFGDENEDDSELARDSY 271
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D E + +C C+HNT G C+ C P + + W++
Sbjct: 272 FYAVSDLQVGGRCKCNGHASKC-VKDREG--NLVCECKHNTAGPECDRCKPFHYDRPWQR 328
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 329 ATAREANEC 337
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 246 (91.7 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 48/127 (37%), Positives = 68/127 (53%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF S LQEW +T + + L R N G + +DP + Y+Y
Sbjct: 205 VAFSTLEGRPSAYNFEESPGLQEWVTSTELLISLDRL-NTFGDDIF---KDPKVLQSYYY 260
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
++ D S+GGRC+CNGHA C P+ CRCQHNT G +CE C P ++ + W +
Sbjct: 261 AVSDFSVGGRCKCNGHASECG---PDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGT 317
Query: 128 SNKPFSC 134
+ C
Sbjct: 318 AEAAHEC 324
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 246 (91.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 48/119 (40%), Positives = 70/119 (58%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF NS LQEW AT++R+ L R N G + +P + Y+Y
Sbjct: 218 VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRL-NTFGDEVF---NEPKVLKSYYY 273
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQS 126
+I D ++GGRC+CNGHA C + + D +C C+HNT G +CE C P + + WR++
Sbjct: 274 AISDFAVGGRCKCNGHASEC-VKNEFDKL--MCNCKHNTYGVDCEKCLPFFNDRPWRRA 329
Score = 106 (42.4 bits), Expect = 0.00019, P = 0.00019
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH++ CD PE +C C+ NT G +CE C GY + + S+ +P C
Sbjct: 722 CTCNGHSETCD---PETG---VCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC 773
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 47/129 (36%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 FYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 47/129 (36%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 217 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 271
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 272 FYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 328
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 329 ATAREANEC 337
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 47/129 (36%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 FYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 47/129 (36%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 FYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 244 (91.0 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 47/127 (37%), Positives = 69/127 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF S LQEW T++ + L R N G + +DP + Y+Y
Sbjct: 205 VAFSTLEGRPSAYNFDGSPTLQEWVTVTDLLISLNRL-NTFGDDIF---KDPKVLQSYYY 260
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+I D S+GGRC+CNGHA C P++ +C C+HNT G +C+ C P Y+ + W +
Sbjct: 261 AISDFSVGGRCKCNGHASECA---PDEAGRLVCVCEHNTAGTDCQHCQPFYQDRPWARGT 317
Query: 128 SNKPFSC 134
+ C
Sbjct: 318 AEAANEC 324
Score = 104 (41.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
C+C+G+ D+ + + + R RC HNT G C+ C PG+ A S + K SC
Sbjct: 814 CQCHGNVDLNAVGNCDSVSGRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASC 870
Score = 33 (16.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 12 LLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTK--NLLGHLMSMADQDPTTTRRYFYSI 69
LL H S F+S W ++ ++ + N+ HL + T R F++
Sbjct: 83 LLHHNASFLTDFHSQEESTWWQSQSMAFGIQHPNSVNITLHLGK--SYEITYVRLKFHTS 140
Query: 70 K--DISIGGRCRCNG 82
+ +I R R +G
Sbjct: 141 RPESFAIYKRSRADG 155
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 47/127 (37%), Positives = 68/127 (53%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S L+ RPS NF S LQEW +T++ + L R N G + +DP + Y+Y
Sbjct: 214 VAFSTLEGRPSAYNFEESPVLQEWVTSTDLLISLDRL-NTFGDDIF---KDPRVLQSYYY 269
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
++ D S+GGRC+CNGHA C P + C CQHNT G +CE C P ++ + W +
Sbjct: 270 AVSDFSVGGRCKCNGHASACG---PNEAGQLACHCQHNTTGVDCERCLPFFQDRPWARGT 326
Query: 128 SNKPFSC 134
+ C
Sbjct: 327 AEDANEC 333
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 236 (88.1 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 46/129 (35%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
+Y++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 YYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 236 (88.1 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 46/129 (35%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
+Y++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 YYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 236 (88.1 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 46/129 (35%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++R+ R H ++D + R Y
Sbjct: 218 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSY 272
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
+Y++ D+ +GGRC+CNGHA C + D +D +C C+HNT G C+ C P + + W++
Sbjct: 273 YYAVSDLQVGGRCKCNGHAARC-VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQR 329
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 330 ATAREANEC 338
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 236 (88.1 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 45/129 (34%), Positives = 73/129 (56%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RP+ +F NS LQ+W AT++++ R H ++D + R Y
Sbjct: 220 IAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRL-----HTFGDENEDDSELARDSY 274
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D +D + +C C+HNT G C+ C P + + W++
Sbjct: 275 FYAVSDLQVGGRCKCNGHASRC-VRDRDD--NLVCDCKHNTAGPECDRCKPFHYDRPWQR 331
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 332 ATAREANEC 340
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 242 (90.2 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 51/135 (37%), Positives = 70/135 (51%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
+ +I S L+ RPS NF S LQEW AT++R+ L R L D +
Sbjct: 230 DGEIAFSTLEGRPSGINFERSGELQEWVTATDIRITLDRLNTFGDELFG----DSQVLKS 285
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDPEDPYHR----ICRCQHNTCGHNCEVCCPGYEQ 120
YFY+I DI++G RC+CNGHA C P H +C C+HNT G +C+ C P Y
Sbjct: 286 YFYAISDIAVGARCKCNGHASKCV---PSTGMHGERTLVCECRHNTDGPDCDRCLPLYND 342
Query: 121 KAWRQSQSNKPFSCE 135
W++S S + C+
Sbjct: 343 LKWKRSTSTEVNECK 357
Score = 106 (42.4 bits), Expect = 0.00019, P = 0.00019
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
C C+GHAD+CD R C CQHNT G NC+ C G+
Sbjct: 744 CDCHGHADICD-----SETGR-CICQHNTHGDNCDQCAKGF 778
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 45/129 (34%), Positives = 72/129 (55%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR--Y 65
I S LD RPS +F NS LQ+W AT++++ R H ++D + R Y
Sbjct: 217 IAFSTLDGRPSAHDFDNSPVLQDWVTATDIKVTFSRL-----HTFGDENEDDSELARDSY 271
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQ 125
FY++ D+ +GGRC+CNGHA C + D + + +C C+HNT G C+ C P + + W++
Sbjct: 272 FYAVSDLQVGGRCKCNGHASRC-VKDRDG--NLVCECKHNTAGPECDRCKPFHYDRPWQR 328
Query: 126 SQSNKPFSC 134
+ + + C
Sbjct: 329 ATAREANEC 337
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 221 (82.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 46/130 (35%), Positives = 71/130 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRT---KNLLGHLMSMADQDPTTTRR 64
I S LD RPS ++F +S LQ+W AT++R+ R + L G D T
Sbjct: 190 IAFSTLDGRPSAQDFDSSPVLQDWVTATDIRVVFSRPHLFRELGGREAGEEDGGAGATP- 248
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
Y+YS+ ++ +GGRC+CNGHA C + D E +C C+HNT G C+ C P + + W+
Sbjct: 249 YYYSVGELQVGGRCKCNGHASRC-VKDKEQKL--VCDCKHNTEGPECDRCKPFHYDRPWQ 305
Query: 125 QSQSNKPFSC 134
++ + + C
Sbjct: 306 RASAREANEC 315
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 43/132 (32%), Positives = 71/132 (53%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQD-----PTTT 62
I S LD RPS K+F +S LQ+W T++R+ R ++ MS + + P +
Sbjct: 204 IAFSTLDGRPSGKDFDSSPVLQDWVTVTDIRVVFSRPQHTRALPMSGRESEDALGAPGSL 263
Query: 63 RRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKA 122
Y+Y++ D +GGRC+CNGHA C + + + +C C+HNT G C+ C P + +
Sbjct: 264 PTYYYAVGDFQVGGRCKCNGHASRC-VREKDGKL--LCECKHNTEGPECDRCKPFHYDRP 320
Query: 123 WRQSQSNKPFSC 134
W+++ + C
Sbjct: 321 WQRATGKEANEC 332
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 44/127 (34%), Positives = 69/127 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S+ D P + +S LQ+W AT++++ L R +LG +D T Y Y
Sbjct: 191 LAFSVQDGSPPGLDLDSSPVLQDWVTATDIQVVLTRPA-VLGD-----SRDSIATGPYSY 244
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
S ++ +GGRC+CNGHA C +LD + H IC CQH T G +C C P Y + W+++
Sbjct: 245 SATELQVGGRCKCNGHASRC-LLDTQG--HLICDCQHGTEGPDCGRCKPFYCDRPWQRAT 301
Query: 128 SNKPFSC 134
+ + +C
Sbjct: 302 AREAHAC 308
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 44/127 (34%), Positives = 66/127 (51%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S+ D P + NS LQ+W AT++R+ L R + G +D T Y Y
Sbjct: 191 LAFSVQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPA-IQGDT-----RDGGVTVPYSY 244
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
S ++ +GGRC+CNGHA C +LD H +C CQH T G +C C P Y + W+++
Sbjct: 245 SATELQVGGRCKCNGHASRC-LLDTHG--HLVCDCQHGTEGPDCSRCKPFYCDRPWQRAT 301
Query: 128 SNKPFSC 134
+ +C
Sbjct: 302 GQEAHAC 308
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 159 (61.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 67 YSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQS 126
Y+I D S+GGRC+CNGHA C D + C C HNT G +CE C P + + W ++
Sbjct: 302 YAISDFSVGGRCKCNGHASKCST-DASGQLN--CECSHNTAGRDCERCKPFHFDRPWARA 358
Query: 127 QSNKPFSCE 135
+ + C+
Sbjct: 359 TAKEANECK 367
Score = 70 (29.7 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 6 NKITISLLDHRPSMKNFFNSTRLQEWTRATNVRL 39
++I S L+ RPS ++ +S LQ+W AT++R+
Sbjct: 210 SRIAFSTLEGRPSSRDLDSSPVLQDWVTATDIRV 243
>RGD|619811 [details] [associations]
symbol:Ntn3 "netrin 3" species:10116 "Rattus norvegicus"
[GO:0005102 "receptor binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0007411 "axon guidance" evidence=NAS] RGD:619811
GO:GO:0007411 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67
UniGene:Rn.95949 EMBL:AY028418 IPI:IPI00193993 UCSC:RGD:619811
InParanoid:Q924Z8 Genevestigator:Q924Z8 Uniprot:Q924Z8
Length = 333
Score = 196 (74.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S D P + NS LQ+W AT++R+ L R + G +D T Y Y
Sbjct: 191 LAFSAQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPA-IQGDT-----RDGGVTVPYSY 244
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
S ++ +GGRC+CNGH+ C ++D H +C CQH T G +C C P Y + W+++
Sbjct: 245 SATELQVGGRCKCNGHSSRC-LMDTHG--HLVCDCQHGTEGPDCSRCKPFYCDRPWQRAT 301
Query: 128 SNKPFSC 134
+ +C
Sbjct: 302 GQEAHAC 308
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S+ D P + NS LQ+W AT++R+ L R + G +D T Y Y
Sbjct: 191 LAFSVQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPA-IQGDT-----RDGGVTVPYSY 244
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
S ++ +GGRC+CNGH+ C ++D H +C CQH T G +C C P Y + W+++
Sbjct: 245 SATELQVGGRCKCNGHSSRC-LMDTHG--HLVCDCQHGTEGPDCSRCKPFYCDRPWQRAT 301
Query: 128 SNKPFSC 134
+ +C
Sbjct: 302 GQEAHAC 308
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 197 (74.4 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 44/128 (34%), Positives = 70/128 (54%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLM-SMADQDPTTTRRYF 66
+ S+ D P + +S LQ+W AT++++ L R +LG +MA T Y
Sbjct: 191 LAFSVQDGSPPGLDLDSSPVLQDWVTATDIQVVLTRPA-VLGDTRGAMA------TAPYS 243
Query: 67 YSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQS 126
YS ++ +GGRC+CNGHA C +LDP+ H C C+H T G +C C P Y + W+++
Sbjct: 244 YSATELQVGGRCKCNGHASRC-LLDPQG--HLTCDCRHGTEGPDCSRCKPFYCDRPWQRA 300
Query: 127 QSNKPFSC 134
+ + +C
Sbjct: 301 TAREAHAC 308
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 44/127 (34%), Positives = 66/127 (51%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S+ D P + +S LQ+W AT+VR+ L R G M P Y Y
Sbjct: 191 LAFSMQDSSPPGLDLDSSPVLQDWVTATDVRVVLTRPSTA-GDPRDMEAVVP-----YSY 244
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
+ D+ +GGRC+CNGHA C +LD + H IC C+H T G +C C P Y + W+++
Sbjct: 245 AATDLQVGGRCKCNGHASRC-LLDTQG--HLICDCRHGTEGPDCGRCKPFYCDRPWQRAT 301
Query: 128 SNKPFSC 134
+ + +C
Sbjct: 302 ARESHAC 308
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/127 (33%), Positives = 68/127 (53%)
Query: 8 ITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFY 67
+ S+ D P + +S LQ+W AT++++ L R +LG +D Y Y
Sbjct: 191 LAFSVQDGSPPGLDLDSSPVLQDWVTATDIQVVLTRP-TVLGDT-----RDAAAVVSYSY 244
Query: 68 SIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQ 127
S ++ +GGRC+CNGHA C +LD + H IC C+H T G +C C P Y + W+++
Sbjct: 245 SATELQVGGRCKCNGHASKC-LLDTQG--HLICDCRHGTEGPDCGRCKPFYCDRPWQRAT 301
Query: 128 SNKPFSC 134
+ + +C
Sbjct: 302 AREAHAC 308
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 49/132 (37%), Positives = 73/132 (55%)
Query: 8 ITISLLDHRPSMK----NFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
IT S+L P+++ +F+NS LQE+ RAT+VR++L G + QD T
Sbjct: 464 ITFSMLTPEPNLRPGYNDFYNSAALQEFVRATHVRIQLH------GQYHT---QDATVPF 514
Query: 64 RY-FYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKA 122
R+ +Y++ +I+I GRC C+GHAD CD PY C + +T G NCE C P + K
Sbjct: 515 RHRYYAVDEITISGRCECHGHADSCDT--SVSPYRCACLPESHTHGANCERCIPLFNDKP 572
Query: 123 WRQSQSNKPFSC 134
+R + F+C
Sbjct: 573 FRPGDQIQAFNC 584
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 205 (77.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 46/132 (34%), Positives = 68/132 (51%)
Query: 8 ITISLL----DHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
+T S+L + RP NF+N+ LQE+ +AT VRL H + P + R
Sbjct: 452 VTFSVLTPGPNQRPGYNNFYNTPSLQEFVKATQVRLHF--------HGQYHTTETPVSPR 503
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
+Y + +I+I GRC+C GHA+ CD PY +C + T G +C+ C P Y K +
Sbjct: 504 HRYYGVNEITITGRCQCYGHANHCDTTS--QPYRCLCSQESFTEGLHCDRCLPLYNNKPF 561
Query: 124 RQSQSNKPFSCE 135
RQS F+C+
Sbjct: 562 RQSDHVHAFNCK 573
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 201 (75.8 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 8 ITISLL----DHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
+T S+L ++RP NF+N+ LQE+ +AT +R H + R
Sbjct: 452 VTFSILTPGPNYRPGYNNFYNTPSLQEFVKATQIRFHF--------HGQYYTTETAVNLR 503
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
+Y++ +I+I GRC+C+GHAD CD PY +C + T G +C+ C P Y K +
Sbjct: 504 HRYYAVDEITISGRCQCHGHADNCDTTS--QPYRCLCSQESFTEGLHCDRCLPLYNDKPF 561
Query: 124 RQSQSNKPFSCE 135
RQ F+C+
Sbjct: 562 RQGDQVYAFNCK 573
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 191 (72.3 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 34 ATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPE 93
AT++R+ L R N G + DP + Y+Y+I D ++GGRC+CNGHA C I +
Sbjct: 1 ATDIRVSLNRL-NTFGDEVF---NDPKVLKSYYYAISDFAVGGRCKCNGHASEC-IRNEL 55
Query: 94 DPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
+C C+HNT G +CE C P + + WR++ + C
Sbjct: 56 GKL--VCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANEC 94
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
C CNGH++ CD PE +C C+ NT G +CE C GY
Sbjct: 479 CTCNGHSETCD---PETG---MCDCRDNTAGSHCEKCSDGY 513
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 196 (74.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 15 HRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISI 74
HRP +F+NS+ LQE+ RAT +RL GH + R +Y++ +I +
Sbjct: 460 HRPGYNDFYNSSVLQEFMRATQIRLHFHGQYYPAGHTVDW--------RHQYYAVDEIIV 511
Query: 75 GGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
GRC+C+GHA+ CD PY +C T G C+ C P Y K +R + F+C
Sbjct: 512 SGRCQCHGHAETCD--RTRRPYRCLCSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNAFNC 569
Query: 135 E 135
+
Sbjct: 570 K 570
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 183 (69.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 7 KITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF 66
K+ ++L+D + S ++QE TN+R+ TK L + P+ +
Sbjct: 188 KVQLNLMDLASGIPAT-QSQKIQELGEITNLRVNF--TK--LAPVPQRGYHPPSA----Y 238
Query: 67 YSIKDISIGGRCRCNGHADVC--DILDPEDP-----YHRICRCQHNTCGHNCEVCCPGYE 119
Y++ + + G C C+GHAD C P P H +C CQHNT G NCE C P Y
Sbjct: 239 YAVSQLRLHGSCLCHGHADRCAPSSRTPASPSSAVQVHEVCVCQHNTAGPNCERCAPFYN 298
Query: 120 QKAWRQSQSNKPFSCE 135
+ WR ++ P C+
Sbjct: 299 NRPWRPAEDQDPHECQ 314
>UNIPROTKB|Q01635 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0031175 "neuron projection development"
evidence=ISS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISS] [GO:0005201 "extracellular matrix
structural constituent" evidence=ISS] [GO:0005604 "basement
membrane" evidence=ISS] [GO:0005606 "laminin-1 complex"
evidence=ISS] [GO:0005607 "laminin-2 complex" evidence=ISS]
[GO:0005615 "extracellular space" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=ISS] [GO:0043259 "laminin-10 complex"
evidence=ISS] [GO:0007162 "negative regulation of cell adhesion"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] GO:GO:0048471 GO:GO:0005615 PROSITE:PS00022
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0005201 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
EMBL:L00962 IPI:IPI00593712 PIR:B45067 UniGene:Gga.53713
STRING:Q01635 eggNOG:NOG241384 HOGENOM:HOG000007552
HOVERGEN:HBG082837 InParanoid:Q01635 OrthoDB:EOG44BB1B
GO:GO:0005607 GO:GO:0043257 Uniprot:Q01635
Length = 303
Score = 169 (64.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD +++ + S R+Q + TN+R++ + L +L+ D +
Sbjct: 134 EGEVIYRVLDPAFRIEDPY-SPRIQNLLKITNLRVKFTKLHTLGDNLL---DSRMEIREK 189
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y+I D+ + G C C GHA C ++ E H C C+HNT G NCE C Y
Sbjct: 190 YYYAIYDMVVRGNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYH 249
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 250 DLPWRPAEGRNSNACK 265
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 186 (70.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 41/132 (31%), Positives = 69/132 (52%)
Query: 8 ITISLL----DHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
+T S+L +HRP +F+N+ LQE+ +AT VR+ + R + H ++ R
Sbjct: 451 LTFSVLTPEPNHRPGYNDFYNTPSLQEFVKATQVRIHM-RGQY---H----TNESWVNFR 502
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
+Y + ++++ GRC C+GHAD CD +PY +C + T G C+ C P Y K +
Sbjct: 503 HRYYGVNEVTVSGRCNCHGHADNCDTA--MEPYRCLCIKESYTEGIQCDRCLPLYNDKPF 560
Query: 124 RQSQSNKPFSCE 135
R ++C+
Sbjct: 561 RPGDQVHAYNCK 572
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 179 (68.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD +++ + S R+Q + TN+RL L + L +L+ D P +
Sbjct: 198 EGEVIFRVLDPAIRIEDPY-SPRIQNQLKITNLRLNLTKLHTLGDNLL---DSRPEIKEK 253
Query: 65 YFYSIKDISIGGRCRCNGHADVCDIL-----DPEDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ + G C C GHA C + D E H C C+HNT G NCE C Y
Sbjct: 254 YYYAMYELVVRGNCFCYGHASECAPIEGIRDDIEGMVHGRCVCKHNTKGLNCEQCDDFYN 313
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 314 DLPWRPAEGRNTNACK 329
>UNIPROTKB|F1LZW7 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] RGD:1563465
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 IPI:IPI00564318
Ensembl:ENSRNOT00000051174 ArrayExpress:F1LZW7 Uniprot:F1LZW7
Length = 282
Score = 165 (63.1 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA +
Sbjct: 170 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATM 223
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 224 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 256
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 176 (67.0 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTR 63
E K+ + ++D + S +++E TN+R+ R L + P+
Sbjct: 185 EGGKVQLHIMDLASGIPAT-QSQKIRELGEITNLRVNFTR----LAPVPQRGYHPPSA-- 237
Query: 64 RYFYSIKDISIGGRCRCNGHADVCDILD--PEDP-----YHRICRCQHNTCGHNCEVCCP 116
+Y++ + + GRC C+GHAD C P P H +C CQHNT G NCE C P
Sbjct: 238 --YYAVSQLRLQGRCLCHGHADRCAPQPGAPAGPSTTVQVHDVCVCQHNTAGPNCERCAP 295
Query: 117 GYEQKAWRQSQSNKPFSCE 135
Y + WR + P C+
Sbjct: 296 FYNNQPWRPADDQDPHECQ 314
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 178 (67.7 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ LD +++ + S R+Q + TN+R++ ++ L +L+ D +
Sbjct: 202 EGEVIFRALDPAFKIEDPY-SPRIQNLLKITNLRIKFVKLHTLGDNLL---DSRMEIREK 257
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ D+ + G C C GHA C +D E H C C+HNT G NCE+C Y
Sbjct: 258 YYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYH 317
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 318 DLPWRPAEGRNSNACK 333
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 22/42 (52%), Positives = 24/42 (57%)
Query: 78 CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGY 118
C+CNGHAD CD + E C CQ T GHNCE C GY
Sbjct: 867 CQCNGHADDCDPVTGE------CLNCQDYTMGHNCERCLAGY 902
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 178 (67.7 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ LD +++ + S R+Q + TN+R++ ++ L +L+ D +
Sbjct: 202 EGEVIFRALDPAFKIEDPY-SPRIQNLLKITNLRIKFVKLHTLGDNLL---DSRMEIREK 257
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ D+ + G C C GHA C +D E H C C+HNT G NCE+C Y
Sbjct: 258 YYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYH 317
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 318 DLPWRPAEGRNSNACK 333
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 178 (67.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ LD +++ + S R+Q + TN+R++ ++ L +L+ D +
Sbjct: 250 EGEVIFRALDPAFKIEDPY-SPRIQNLLKITNLRIKFVKLHTLGDNLL---DSRMEIREK 305
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ D+ + G C C GHA C +D E H C C+HNT G NCE+C Y
Sbjct: 306 YYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYH 365
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 366 DLPWRPAEGRNSNACK 381
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 78 CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGY 118
C+CNGHA+ CD + E C CQ T GHNCE C GY
Sbjct: 915 CQCNGHAEDCDTVTGE------CLSCQDYTTGHNCERCLAGY 950
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 177 (67.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ LD +++ + S R+Q + TN+R++ ++ L +L+ D +
Sbjct: 215 EGEVIFRALDPAFRIEDPY-SPRIQNLLKITNLRIKFVKLHTLGDNLL---DSRMEIREK 270
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ D+ + G C C GHA C +D E H C C+HNT G NCE+C Y
Sbjct: 271 YYYAVYDMVVRGNCFCYGHASECAPVDGFSEEVEGMVHGHCMCRHNTKGLNCELCMDFYH 330
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 331 DLPWRPAEGRNSNACK 346
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 78 CRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGY 118
C+CNGHA+ CD + E C CQ T GHNCE C GY
Sbjct: 880 CQCNGHAEDCDSVTGE------CSSCQDYTTGHNCERCLAGY 915
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 176 (67.0 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 41/121 (33%), Positives = 60/121 (49%)
Query: 15 HRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISI 74
HRP +F+NS+ LQE+ AT +RL + L D +R +Y++ +I+I
Sbjct: 459 HRPGDYDFYNSSLLQEFMTATQIRLYF---RGLFYPAWHTVD-----SRHRYYAVDEITI 510
Query: 75 GGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
GRC+C+GHA+ CD PY +C T G C C P Y K +R F+C
Sbjct: 511 IGRCQCHGHAETCD--RTRRPYRCLCSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNC 568
Query: 135 E 135
+
Sbjct: 569 K 569
>UNIPROTKB|A1A4H7 [details] [associations]
symbol:MGC139448 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046658 "anchored to plasma membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:DAAA02007617 EMBL:DAAA02007618
EMBL:DAAA02007619 EMBL:DAAA02007620 EMBL:DAAA02007621
EMBL:DAAA02007622 EMBL:DAAA02007623 EMBL:DAAA02007624 EMBL:BC126499
IPI:IPI00829534 RefSeq:NP_001073838.1 UniGene:Bt.34180
Ensembl:ENSBTAT00000019313 GeneID:787473 KEGG:bta:787473
OMA:ELAHPPD NextBio:20928482 Uniprot:A1A4H7
Length = 461
Score = 169 (64.5 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA V
Sbjct: 252 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELRLARYFYAISDIKVHGRCKCNLHATV 305
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 306 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 338
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 168 (64.2 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA V
Sbjct: 175 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVHGRCKCNLHATV 228
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 229 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 261
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 69 IKDISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKA 122
I IS G C C GH++ C +D + IC C+HNT G +CE+C GY + A
Sbjct: 278 IPSISSIGNCECFGHSNRCSYIDLLNTV--ICVSCKHNTRGQHCELCRLGYFRNA 330
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 164 (62.8 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
Y+YS+ ++ +GGRC+CNGHA C + D E +C C+HNT G C+ C P + + W+
Sbjct: 1 YYYSVGELQVGGRCKCNGHASRC-VKDKEQKL--VCDCKHNTEGPECDRCKPFHYDRPWQ 57
Query: 125 QSQSNKPFSC 134
++ + + C
Sbjct: 58 RASAREANEC 67
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 164 (62.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
Y+YS+ ++ +GGRC+CNGHA C + D E +C C+HNT G C+ C P + + W+
Sbjct: 4 YYYSVGELQVGGRCKCNGHASRC-VKDKEQKL--VCDCKHNTEGPECDRCKPFHYDRPWQ 60
Query: 125 QSQSNKPFSC 134
++ + + C
Sbjct: 61 RASAREANEC 70
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA V
Sbjct: 252 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATV 305
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 306 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 338
Score = 108 (43.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 69 IKDISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQ-S 126
I IS G C C GH++ C +D + IC C+HNT G +CE+C GY + A Q
Sbjct: 355 IPSISSIGNCECFGHSNRCSYIDLLNTV--ICVSCKHNTRGQHCELCRLGYFRNASAQLD 412
Query: 127 QSNKPFSC 134
N C
Sbjct: 413 DENVCIEC 420
>UNIPROTKB|F1LYH8 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
IPI:IPI00560761 Ensembl:ENSRNOT00000042019 ArrayExpress:F1LYH8
Uniprot:F1LYH8
Length = 378
Score = 165 (63.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA +
Sbjct: 170 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATM 223
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 224 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 256
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ LD +++ + S R+Q + TN+R++ ++ L +L+ D +
Sbjct: 214 EGEVIFRALDPAFRIEDPY-SPRIQNLLKITNLRIKFVKLHTLGDNLL---DSRMEIREK 269
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ D+ + G C C GHA C +D E H C C+HNT G NCE C Y
Sbjct: 270 YYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCEQCMDFYH 329
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 330 DLPWRPAEGRNSNACK 345
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 22/42 (52%), Positives = 24/42 (57%)
Query: 78 CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGY 118
C+CNGHAD CD + E C CQ T GHNCE C GY
Sbjct: 879 CQCNGHADDCDSVTGE------CLSCQDYTTGHNCERCLAGY 914
>RGD|1563465 [details] [associations]
symbol:Ntng1 "netrin G1" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:1563465 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 IPI:IPI00369129
Ensembl:ENSRNOT00000045113 UCSC:RGD:1563465 ArrayExpress:F1M3C7
Uniprot:F1M3C7
Length = 398
Score = 165 (63.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA +
Sbjct: 170 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATM 223
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 224 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 256
>UNIPROTKB|F1LX88 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00559428 ProteinModelPortal:F1LX88
Ensembl:ENSRNOT00000043455 ArrayExpress:F1LX88 Uniprot:F1LX88
Length = 401
Score = 165 (63.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA +
Sbjct: 170 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATM 223
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 224 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 256
>UNIPROTKB|F1LYF9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00565565 Ensembl:ENSRNOT00000050140
ArrayExpress:F1LYF9 Uniprot:F1LYF9
Length = 412
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA +
Sbjct: 170 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATM 223
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 224 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 256
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 69 IKDISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQ 125
I IS G C C GH++ C +D + IC C+HNT G +CE+C GY + A Q
Sbjct: 273 IPSISSIGNCECFGHSNRCSYIDLLNTV--ICVSCKHNTRGQHCELCRLGYFRNASAQ 328
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 165 (63.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA +
Sbjct: 170 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATM 223
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 224 C-VYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 256
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 69 IKDISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQ-S 126
I IS G C C GH++ C +D + IC C+HNT G +CE+C GY + A Q
Sbjct: 273 IPSISSIGNCECFGHSNRCSYIDLLNTV--ICVSCKHNTRGQHCELCRLGYFRNASAQLD 330
Query: 127 QSNKPFSC 134
N C
Sbjct: 331 DENVCIEC 338
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 7 KITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF 66
++ + +LD ++N + S +Q+ TN+R+ + L L+ D + +Y+
Sbjct: 197 EVVLKVLDPSFEIENPY-SPYIQDLVTLTNLRINFTKLHTLGDALLGRRQND--SLDKYY 253
Query: 67 YSIKDISIGGRCRCNGHADVC--------DILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
Y++ ++ + G C CNGHA C D+ P H C CQHNT G NCE C +
Sbjct: 254 YALYEMIVRGSCFCNGHASECRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFF 313
Query: 119 EQKAWRQS---QSNKPFSC 134
+ WR + Q N SC
Sbjct: 314 QDAPWRPAADLQDNACRSC 332
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD +++ + S R+Q + TN+R++ + L +L+ D +
Sbjct: 199 EGEVIFRVLDPAFRIEDPY-SPRIQNMLKITNLRVKFTKLHTLGDNLL---DSRIEIKEK 254
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y+I D+ + G C C GHA C +D E H C C HNT G NCE C Y
Sbjct: 255 YYYAIYDMVVRGNCFCYGHASECAPVDGTGEAVEGMVHGHCMCNHNTIGLNCERCQDFYH 314
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 315 DLPWRPAEGRNTNACK 330
Score = 100 (40.3 bits), Expect = 0.00092, P = 0.00092
Identities = 21/41 (51%), Positives = 23/41 (56%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGY 118
C CNGHA+ CD P+ CR H T GHNCE C GY
Sbjct: 863 CTCNGHAEQCD---PQTGQCLSCR-DHTT-GHNCERCLGGY 898
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 166 (63.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF--YSIKDISIGGRCRCNG 82
S + QE + TN+R++LL+ ++ DP ++F Y+I D + G C CNG
Sbjct: 212 SAKAQEQLKITNLRVQLLKRQSC-----PCQRNDPNAKPQHFTHYAIYDFIVKGSCFCNG 266
Query: 83 HADVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKP 131
HAD C +D P +H + C C+HNT G +C+ C P Y + W + ++ P
Sbjct: 267 HADQCVPVDGFKPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYNDRPWEAADGKTGSP 326
Query: 132 FSC 134
C
Sbjct: 327 KEC 329
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKP 131
C+CNGHAD C DI E +R +C CQHNT G +C+ C PG+ + R + P
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSA--P 389
Query: 132 FSCE 135
+C+
Sbjct: 390 DACK 393
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 174 (66.3 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLL---RTKNLLGHLMSMADQDPT 60
E + SLL +RP + S L ++ +R+RL T N L + D P+
Sbjct: 326 ENGVLHASLLKNRPGATD--QSPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDS-PS 382
Query: 61 TTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQ 120
+ FYS+ + + R CNGHA+ P+DP + C CQHNTCG CE CCP ++
Sbjct: 383 LEKHSFYSLSQLKVSARLDCNGHANRSHE-SPDDPLMQ-CICQHNTCGAQCEQCCPLFQD 440
Query: 121 KAWR 124
+ ++
Sbjct: 441 RPYQ 444
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 168 (64.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 6 NKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRY 65
+K+ S+ D ++ ++ + + + + TN+R+ + L H+M + P++
Sbjct: 184 SKVKFSVQDLASTITTSYSQS-VNKLGQFTNLRINFTQ----LPHIMHHNYRSPSS---- 234
Query: 66 FYSIKDISIGGRCRCNGHADVCDILDPEDPY----------HRICRCQHNTCGHNCEVCC 115
FY++ ++ + G C CNGHAD C + DP+ H C CQHNT G NC C
Sbjct: 235 FYAVTEMQVLGSCFCNGHADRC--IPSRDPHAMDNCSLPQVHGRCECQHNTAGPNCGHCA 292
Query: 116 PGYEQKAWRQSQSNKPFSCE 135
Y + W ++ N P C+
Sbjct: 293 ALYNDRPWAPAEDNDPHECQ 312
Score = 101 (40.6 bits), Expect = 0.00045, P = 0.00045
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 78 CRCNGHADVCDILDPEDPYHR-------ICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSN 129
C CNGH+ C DPE +H +C CQHNT G+NCE C Y + RQ ++
Sbjct: 314 CNCNGHSASCHF-DPE-VFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQ-RQDLTH 370
Query: 130 KPFSCE 135
P +C+
Sbjct: 371 -PEACQ 375
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 169 (64.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD +++ + S R+Q + TN+R++ + L +L+ D +
Sbjct: 193 EGEVIYRVLDPAFRIEDPY-SPRIQNLLKITNLRVKFTKLHTLGDNLL---DSRMEIREK 248
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDP-----EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y+I D+ + G C C GHA C ++ E H C C+HNT G NCE C Y
Sbjct: 249 YYYAIYDMVVRGNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYH 308
Query: 120 QKAWRQSQSNKPFSCE 135
WR ++ +C+
Sbjct: 309 DLPWRPAEGRNSNACK 324
Score = 101 (40.6 bits), Expect = 0.00072, P = 0.00072
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 77 RCRCNGHADVC--DI---LDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNK 130
+C CNGH+ C D+ + + +C CQHNT G NCE C P Y Q R +
Sbjct: 325 KCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRD-- 382
Query: 131 PFSCE 135
P CE
Sbjct: 383 PDVCE 387
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 169 (64.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ + LD + + ++ST +Q TN+R+ R L L++ ++P +
Sbjct: 197 EGEVVLKALDPSFDIHDPYDST-IQGLITLTNLRVNFTRLLTLGDTLLTRRKRNPQD--K 253
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILDPE--DPY------HRICRCQHNTCGHNCEVCCP 116
Y+Y++ ++ + G C CNGHA C +D D + H C CQHNT G+NCE C
Sbjct: 254 YYYALYEMVVRGSCFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQD 313
Query: 117 GYEQKAWR 124
Y WR
Sbjct: 314 FYHDAPWR 321
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 162 (62.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHA 84
S Q+ + TN+RL LL+ + + + ++ P R Y+I D+ I G C CNGHA
Sbjct: 190 SPEAQDLLKLTNLRLLLLKRQECPCRGLGLVEK-PQ--RFAHYAIYDLIIRGSCFCNGHA 246
Query: 85 DVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWR--QSQSNKPFS 133
+ C++ + P H++ C C+HNT G +CE C P Y + W+ ++ P
Sbjct: 247 EECELANRTVPAKAQSRLHKVHGKCVCRHNTAGDHCEKCAPLYNDQPWKPGDGKTGAPNE 306
Query: 134 CE 135
C+
Sbjct: 307 CK 308
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 77 RCRCNGHADVC--DI---LDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQ---KAWRQSQ 127
+CRC+ HAD C D+ L +C C+HNT GH C+ C PGY + K ++
Sbjct: 309 KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAE 368
Query: 128 SNKPFSCE 135
KP SC+
Sbjct: 369 VCKPCSCQ 376
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 162 (62.1 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF--YSIKDISIGGRCRCNG 82
S ++QE + TN+R++LL+ ++ D T ++F Y+I D + G C CNG
Sbjct: 212 SAKVQEQLKITNLRVQLLKRQSC-----PCQRNDLTAKPQHFTHYAIYDFIVKGSCFCNG 266
Query: 83 HADVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKP 131
HAD C +D P +H + C C+HNT G +C+ C P Y + W + ++ P
Sbjct: 267 HADQCIPVDGFRPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYNDRPWEAADGKTGSP 326
Query: 132 FSC 134
C
Sbjct: 327 KEC 329
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKP 131
C+CNGHAD C DI E +R +C CQHNT G +C+ C PG+ + R + P
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSA--P 389
Query: 132 FSCE 135
+C+
Sbjct: 390 DACK 393
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 161 (61.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 27 RLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADV 86
+L+++ T++R+RLLR +G + D RYFY+I DI + GRC+CN HA
Sbjct: 252 KLRDFFTVTDLRIRLLRPA--VGEIFV----DELHLARYFYAISDIKVRGRCKCNLHATS 305
Query: 87 CDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
C + D C C+HNT G +C C Y+ + W
Sbjct: 306 C-LYDNSK---LTCECEHNTTGPDCGKCKKNYQGRPW 338
Score = 108 (43.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 69 IKDISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQ-S 126
I IS G C C GH++ C +D + IC C+HNT G +CE+C GY + A Q
Sbjct: 355 IPSISSIGNCECFGHSNRCSYIDLLNTV--ICVSCKHNTRGQHCELCRLGYFRNASAQLD 412
Query: 127 QSNKPFSC 134
N C
Sbjct: 413 DENVCIEC 420
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHA 84
ST Q + TN+R+RLL ++ H + +P +Y++ D + G C CNGHA
Sbjct: 188 STEAQAQLKVTNLRVRLLERQSCPCHPL-----EPPALPAPYYAVYDFIVKGSCFCNGHA 242
Query: 85 DVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKPFS 133
D C + P +H + C C+HNT G +C+ C P Y + W+ + ++ P
Sbjct: 243 DHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAADGKTGAPRE 302
Query: 134 CE 135
C+
Sbjct: 303 CQ 304
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 78 CRCNGHADVC--DI---LDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQ---KAWRQSQS 128
C+CNGHAD C D+ L + +C CQHNT G +C+ C PG+ + K + +
Sbjct: 306 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA 365
Query: 129 NKPFSC 134
KP SC
Sbjct: 366 CKPCSC 371
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 89 (36.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 67 YSIKDISIGGRCRCNGHADVC 87
Y++ D ++GGRC+CNGHA C
Sbjct: 394 YAVSDFAVGGRCKCNGHASEC 414
Score = 88 (36.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 100 CRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSCE 135
C C+HNT G CE C P Y + W ++ N C+
Sbjct: 461 CACKHNTAGPECERCKPFYFDRPWGRATDNDANECK 496
Score = 60 (26.2 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 7 KITISLLDHRPSMKNFFNSTRLQEWTRATNVRL 39
+ + L+ RPS + +S LQ+W AT++R+
Sbjct: 212 RFAFNTLEGRPSANDLDSSLVLQDWVTATDIRV 244
Score = 52 (23.4 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 100 CRCQHNTCGHNCEVCCPGYEQ 120
C C+ G C C GY+Q
Sbjct: 580 CPCKEGVTGLTCNRCARGYQQ 600
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 164 (62.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + ++S R+Q + TN+R+ L R L +L+ D +
Sbjct: 214 EGEVIYRVLDPAIPIPDPYSS-RIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 269
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILD--P---EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ + G C C GHA C P E H C C+HNT G NCE C Y
Sbjct: 270 YYYALYELVVRGNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYR 329
Query: 120 QKAWRQSQSNKPFSC 134
WR ++ +C
Sbjct: 330 DLPWRPAEDGHSHAC 344
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 75 GGRCR---CNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQS 126
GGRC+ C+G+ D D D DP+ C RC H+T G +C C PG+ +A RQS
Sbjct: 980 GGRCQLCECSGNIDPMDP-DACDPHTGQCLRCLHHTEGPHCAHCKPGFHGQAARQS 1034
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF--YSIKDISIGGRCRCNG 82
S ++QE + TN+R+RLL+ ++ D +F Y+I D + G C CNG
Sbjct: 18 SAKVQEQLKITNLRVRLLKRQSC-----PCQRNDLNAKPHHFTHYAIYDFIVKGSCFCNG 72
Query: 83 HADVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKP 131
HAD C ++ P +H + C C+HNT G +C+ C P Y + W + ++ P
Sbjct: 73 HADQCLPVEGFRPVKAPGAFHVVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAP 132
Query: 132 FSC 134
C
Sbjct: 133 NEC 135
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKP 131
C+CNGHAD C DI E +R +C CQHNT G +C+ C PG+ + R + P
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSA--P 195
Query: 132 FSCE 135
+C+
Sbjct: 196 DACK 199
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 161 (61.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 7 KITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF 66
K+ ++L+D + S ++QE TN+R+ R L + P+ +
Sbjct: 188 KVQLNLMDLVSGIPAT-QSQKIQEVGEITNLRVNFTR----LAPVPQRGYHPPSA----Y 238
Query: 67 YSIKDISIGGRCRCNGHADVCD-----ILDPEDPY--HRICRCQHNTCGHNCEVCCPGYE 119
Y++ + + G C C+GHAD C P H +C CQHNT G NCE C P Y
Sbjct: 239 YAVSQLRLQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYN 298
Query: 120 QKAWRQSQSNKPFSCE 135
+ WR ++ C+
Sbjct: 299 NRPWRPAEGQDAHECQ 314
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 155 (59.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF--YSIKDISIGGRCRCNG 82
S ++QE + TN+R+RLL+ ++ D +F Y+I D + G C CNG
Sbjct: 18 SAKVQEQLKITNLRVRLLKRQSC-----PCQRNDLNAKPHHFTHYAIYDFIVKGSCFCNG 72
Query: 83 HADVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKP 131
HAD C ++ P +H + C C+HNT G +C+ C P Y + W + ++ P
Sbjct: 73 HADQCLPVEGFRPVKAPGAFHVVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAP 132
Query: 132 FSC 134
C
Sbjct: 133 NEC 135
Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKP 131
C+CNGHAD C DI E +R +C CQHNT G +C+ C PG+ + R + P
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSA--P 195
Query: 132 FSCE 135
+C+
Sbjct: 196 DACK 199
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 157 (60.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 17 PSMKNFFNS-TRLQ------EWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSI 69
P ++N N TRL+ E+ T++R+RLLR LG + +YFY+I
Sbjct: 225 PDLRNMDNLYTRLESAKGLKEFFTLTDLRMRLLRPA--LGGTYVQREN----LYKYFYAI 278
Query: 70 KDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+I + GRC+CN HA++C + + C C+HNT G +C C + ++WR
Sbjct: 279 SNIEVTGRCKCNLHANLCSVREGSLQ----CECEHNTTGPDCGKCKRSFRTRSWR 329
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 28 LQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVC 87
L+E+ T++R+RLLR LG + +YFY+I +I + GRC+CN HA++C
Sbjct: 243 LKEFFTFTDLRMRLLRPA--LGGTYVQREN----LYKYFYAISNIEVIGRCKCNLHANLC 296
Query: 88 DILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+ + C C+HNT G +C C + +AWR
Sbjct: 297 TVREGSLQ----CECEHNTTGPDCGKCKKNFRTRAWR 329
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + ++S R+Q + TN+R+ L R L +L+ D +
Sbjct: 217 EGEVIYRVLDPAIPIPDPYSS-RIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 272
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILD--P---EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ I G C C GHA C P E H C C+HNT G NCE C Y+
Sbjct: 273 YYYALYELVIRGNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQ 332
Query: 120 QKAWRQSQSNKPFSC 134
W ++ +C
Sbjct: 333 DLPWHPAEDGHTHAC 347
Score = 110 (43.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 75 GGRCR---CNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQS 126
GGRC+ C+G+ D D D DP+ C RC HNT G +C C PG+ +A RQS
Sbjct: 981 GGRCQLCECSGNIDPMDP-DACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQS 1035
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + ++S R+Q + TN+R+ L R L +L+ D +
Sbjct: 217 EGEVIYRVLDPAIPIPDPYSS-RIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 272
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILD--P---EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ I G C C GHA C P E H C C+HNT G NCE C Y+
Sbjct: 273 YYYALYELVIRGNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQ 332
Query: 120 QKAWRQSQSNKPFSC 134
W ++ +C
Sbjct: 333 DLPWHPAEDGHTHAC 347
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + + S R+Q + TN+R+ L R L +L+ D +
Sbjct: 217 EGEVIYRVLDPAIPIPDPY-SPRIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 272
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILD--P---EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ + G C C GHA C P E H C C+HNT G NCE C Y
Sbjct: 273 YYYALYELVVRGNCFCYGHASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYH 332
Query: 120 QKAWRQSQSNKPFSC 134
WR ++ +C
Sbjct: 333 DLPWRPAEDGHSHAC 347
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHA 84
S ++QE + TN+R++LL+ ++ + ++ T Y+I D + G C CNGHA
Sbjct: 212 SAKVQEQLKITNLRVQLLKRQSCPCQRNDLNEEPQHFTH---YAIYDFIVKGSCFCNGHA 268
Query: 85 DVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKPFS 133
D C + P +H + C C+HNT G +C+ C P Y + W + ++ P
Sbjct: 269 DQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAADGKTGAPNE 328
Query: 134 C 134
C
Sbjct: 329 C 329
Score = 109 (43.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGYEQ---KAWRQSQS 128
C+CNGHAD C D+ E +R +C CQHNT G C+ C PG+ + + + +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 129 NKPFSC 134
KP SC
Sbjct: 392 CKPCSC 397
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHA 84
S ++QE + TN+R+RLL+ ++ + D + Y++ D + G C CNGHA
Sbjct: 212 SAKVQEQLKITNLRVRLLKRQSCP---CQINDLNAKPHHFMHYAVYDFIVKGSCFCNGHA 268
Query: 85 DVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--QSNKPFS 133
D C ++ P +H + C C+HNT G +C+ C P Y + W + ++ P
Sbjct: 269 DQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNE 328
Query: 134 C 134
C
Sbjct: 329 C 329
Score = 109 (43.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKP 131
C+CNGHAD C D+ E +R +C CQHNT G +C+ C PG+ + R + P
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSA--P 389
Query: 132 FSCE 135
+C+
Sbjct: 390 DACK 393
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 155 (59.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 28 LQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVC 87
L+E+ T++R+RLLR LG + +YFY+I +I + GRC+CN HA++C
Sbjct: 243 LKEFFTFTDLRMRLLRPA--LGGTYVQREN----LYKYFYAISNIEVIGRCKCNLHANLC 296
Query: 88 DILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+ + C C+HNT G +C C + +AWR
Sbjct: 297 TVREGSLQ----CECEHNTTGPDCGRCKKNFRTRAWR 329
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 154 (59.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 17 PSMKNFFNS-TRLQ------EWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSI 69
P ++N N TRL+ E+ T++R+RLLR LG + +YFY+I
Sbjct: 225 PDLRNMDNLYTRLESAKGLKEFFTLTDLRMRLLRPA--LGGTYVQREN----LYKYFYAI 278
Query: 70 KDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+I + GRC+CN HA++C + + C C+HNT G +C C + ++WR
Sbjct: 279 SNIEVIGRCKCNLHANLCSMREGSLQ----CECEHNTTGPDCGKCKKNFRTRSWR 329
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 154 (59.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 19 MKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRC 78
M+N + + ++QE + TN+R++LL+ ++ + + T Y+I D + G C
Sbjct: 207 MENPYGA-KVQEQLKITNLRVQLLKRQSCPCQRNHLNAEPQHFTH---YAIYDFIVKGSC 262
Query: 79 RCNGHADVCDILDPEDP------YHRI---CRCQHNTCGHNCEVCCPGYEQKAWRQS--Q 127
CNGHAD C +D P +H + C C+HNT G +C+ C P Y + W + +
Sbjct: 263 FCNGHADQCIPIDGFRPVKAPGAFHVVHGKCICKHNTAGTHCQHCAPLYNDRPWEAADGK 322
Query: 128 SNKPFSC 134
+ P C
Sbjct: 323 TGSPNEC 329
Score = 109 (43.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 78 CRCNGHADVC--DILDPEDPYHR---ICR-CQHNTCGHNCEVCCPGY 118
C+CNGHAD C DI E +R +C CQHNT G +C+ C PG+
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGF 378
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 153 (58.9 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 13 LDHRPSMKNFFNSTR-LQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKD 71
L + S+ ++T+ L+++ T++R+RLLR G + D RYFY+I D
Sbjct: 237 LHNMASLYGQLDTTKKLRDFFTITDLRIRLLRPAT--GEIYV----DEQHLARYFYAISD 290
Query: 72 ISIGGR--CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAW 123
I + GR C+CN HA C E+ +C C+HNT G +C C Y+ + W
Sbjct: 291 IRVYGRNRCKCNLHATGCK----EENKRLLCECEHNTTGPDCGKCKKNYQGRPW 340
Score = 103 (41.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 45 KNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQ 103
KN G S P I IS G C C GH++ C ++ + IC C+
Sbjct: 333 KNYQGRPWSPGSYLPIPKGTANICIPSISSIGNCECFGHSNRCSYIELLNTV--ICVSCK 390
Query: 104 HNTCGHNCEVCCPGYEQKA 122
HNT G +CE+C GY + A
Sbjct: 391 HNTRGQHCELCRLGYFRNA 409
Score = 36 (17.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 8 ITIS-LLDHRPSMKNFFNSTRLQEWTRATNV 37
+T+S ++ H PS+ ++ + Q +T V
Sbjct: 14 VTVSSMMQHYPSVWGHYDVCKTQIYTEEGKV 44
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 152 (58.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 17 PSMKNFFNS-TRLQ------EWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSI 69
P ++N N TRL+ ++ T++R+RLLR LG + +YFY+I
Sbjct: 162 PELRNMDNLYTRLESAKGLKDFFTLTDLRMRLLRPA--LGGTYVQREN----LYKYFYAI 215
Query: 70 KDISIGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+I + GRC+CN HA++C + + C C HNT G +C C + ++WR
Sbjct: 216 SNIEVTGRCKCNLHANLCSVREGSLQ----CECDHNTTGPDCGKCKRSFRTRSWR 266
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 158 (60.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 39/136 (28%), Positives = 63/136 (46%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + + S R+Q + TN+R+ L R L +L+ D +
Sbjct: 216 EGEVIYRVLDPAIPIPDPY-SPRIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 271
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILD--P---EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ + G C C GHA C P E H C C+HNT G NCE C Y
Sbjct: 272 YYYALYELVVRGNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYH 331
Query: 120 QKAWRQSQSNKPFSCE 135
W ++ +C+
Sbjct: 332 DLPWHPAEDGHSHACK 347
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 158 (60.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 39/136 (28%), Positives = 63/136 (46%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + + S R+Q + TN+R+ L R L +L+ D +
Sbjct: 218 EGEVIYRVLDPAIPIPDPY-SPRIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 273
Query: 65 YFYSIKDISIGGRCRCNGHADVCDILD--P---EDPYHRICRCQHNTCGHNCEVCCPGYE 119
Y+Y++ ++ + G C C GHA C P E H C C+HNT G NCE C Y
Sbjct: 274 YYYALYELVVRGNCFCYGHASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYH 333
Query: 120 QKAWRQSQSNKPFSCE 135
W ++ +C+
Sbjct: 334 DLPWHPAEDRHSHACK 349
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 155 (59.6 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 7 KITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF 66
K+ ++L+D ++ S ++QE TN+R+ TK L + P+ +
Sbjct: 188 KVQLNLMDLASAIPAS-QSKKIQELGDITNLRVNF--TK--LAPVPQRGSYPPSA----Y 238
Query: 67 YSIKDISIGGRCRCNGHADVCDILDPEDP-----YHRICRCQHNTCGHNCEVCCPGYEQK 121
+++ + + G C C+GHAD C +P + +C CQHNT G NC+ C P Y +
Sbjct: 239 FAVSQLRLQGSCFCHGHADRC-APNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNR 297
Query: 122 AWRQSQSNKPFSCE 135
WR ++ C+
Sbjct: 298 PWRPAEGQDTHECQ 311
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 157 (60.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHA 84
S +QE R TN+R+ L + L +L+ D +Y+Y++ ++ + G C C+GHA
Sbjct: 215 SPDIQELLRVTNLRVNLTKLHTLGDNLL---DSRREVLHKYYYAVDELVMRGSCFCHGHA 271
Query: 85 DVCDILD---PEDP--YHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
C P P H C C+H+T G NCE C Y + WR ++ + +C
Sbjct: 272 AECAPAPGAPPSVPGMIHGRCVCKHHTQGLNCERCEDFYHELPWRPAEGSSTNAC 326
Score = 100 (40.3 bits), Expect = 0.00092, P = 0.00092
Identities = 25/56 (44%), Positives = 29/56 (51%)
Query: 75 GGRCR-CNGHADVCDILDPEDPYHRI--C-RCQHNTCGHNCEVCCPGYEQKAWRQS 126
GG CR C H ++ D DPE R C RC +NT G +C C PGY A R S
Sbjct: 957 GGHCRPCQCHNNI-DTTDPEACDRRTGQCLRCLYNTAGPHCAECQPGYYGDAMRHS 1011
>UNIPROTKB|Q91429 [details] [associations]
symbol:laminin alpha 1 chain "Laminin alpha 1 chain"
species:9031 "Gallus gallus" [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] GO:GO:0005615
GO:GO:0005911 GO:GO:0007166 GO:GO:0005201 GO:GO:0043208
GeneTree:ENSGT00700000104140 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOGENOM:HOG000293201
OrthoDB:EOG4K3KVB GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 EMBL:S80617 IPI:IPI00822472
UniGene:Gga.49380 STRING:Q91429 Ensembl:ENSGALT00000036889
InParanoid:Q91429 Uniprot:Q91429
Length = 174
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 4 EENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMA-----DQD 58
E +I SL++ RPS + S +L ++T A +RLRL R + L LM+++ + D
Sbjct: 98 EHGEIHTSLINGRPSADD--PSQKLLDFTSARYIRLRLQRIRTLNADLMTLSHHDPKELD 155
Query: 59 PTTTRRYFYSIKDISIGG 76
P TRRY+YSIKDIS+GG
Sbjct: 156 PIVTRRYYYSIKDISVGG 173
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 153 (58.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/137 (29%), Positives = 65/137 (47%)
Query: 7 KITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYF 66
K+ ++L+D ++ S ++QE TN+R+ TK L + P+ YF
Sbjct: 188 KVQLNLMDLASAIPAS-QSKKIQELGDITNLRVNF--TK--LAPVPQRGSYPPSA---YF 239
Query: 67 YSIKDISIGGRCRCNGHADVCDILDPEDP--------YHRICRCQHNTCGHNCEVCCPGY 118
++ + + G C C+GHAD C +P P + +C CQHNT G NC+ C P Y
Sbjct: 240 -AVSQLRLQGSCFCHGHADRC-APNPGGPTGSTTAVQVNDVCVCQHNTAGPNCDRCAPFY 297
Query: 119 EQKAWRQSQSNKPFSCE 135
+ WR ++ C+
Sbjct: 298 NNRPWRPAEGQDIHECQ 314
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 155 (59.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 36/116 (31%), Positives = 55/116 (47%)
Query: 28 LQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVC 87
+Q + TN+R+++ + L +L+ D +Y+Y I ++ + G C C GHA C
Sbjct: 241 VQNQLKMTNLRIQMTKLHKLGDNLL---DSRLENEEKYYYGISNMVVRGSCSCYGHASQC 297
Query: 88 DILDP-------EDPY-HRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSCE 135
LDP ED H C C HNT G NCE C + W+ + K +C+
Sbjct: 298 LPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACK 353
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 153 (58.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 33 RATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDP 92
+ TN+R + L L+ D P +Y+Y+I +I + G C C GHA C +DP
Sbjct: 233 KITNLRFNFTKLHTLGDDLL---DYRPEIDEKYYYAIYEIVVRGSCSCYGHASRCIPIDP 289
Query: 93 E----------DPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
D H C C HNT G NCE C Y WR + ++ C
Sbjct: 290 HVSPNTVMERADIVHGRCECMHNTEGLNCEKCKAFYNDLPWRPAIGDEKNEC 341
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 67 YSIKDISIGGRCRCNGHADVCDILDP----EDPY--HRI---CRCQHNTCGHNCEVCCPG 117
Y+I D+ I G C CNGHA+ C++ + Y H++ C C+HNT G +CE C P
Sbjct: 196 YAIYDLIIRGSCFCNGHAEECELANRTAYNSASYVKHQVHGKCVCRHNTAGDHCEKCAPL 255
Query: 118 YEQKAWR--QSQSNKPFSCE 135
Y + W+ ++ P C+
Sbjct: 256 YNDQPWKPGDGKTGAPNECK 275
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 77 RCRCNGHADVC--DI---LDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQ---KAWRQSQ 127
+CRC+ HAD C D+ L +C C+HNT GH C+ C PGY + K ++
Sbjct: 276 KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAE 335
Query: 128 SNKPFSCE 135
KP SC+
Sbjct: 336 VCKPCSCQ 343
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 135 (52.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 36/108 (33%), Positives = 51/108 (47%)
Query: 25 STRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRRYFYSIKDISIGGRCRCNGHA 84
ST + TNVR+RLL+ + +AD + T R Y+I D+ + G C C+GHA
Sbjct: 201 STDARSLLGVTNVRIRLLQPHSCP---CPIADANAATPR---YAISDLILKGGCLCHGHA 254
Query: 85 DVC--------DILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
D C + H C C+H+T G +CE C Y + WR
Sbjct: 255 DQCVPTGGKHNSKTFGKHVVHGKCSCRHHTAGDHCERCHRLYNDRPWR 302
Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 78 CRCNGHADVCDI-----LDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPF 132
C+CNGHA+ C L + +C C HNT G +C+ C G+ + + S P
Sbjct: 317 CKCNGHAESCHFDESIWLRSGQQHGGVCDCLHNTTGQHCQHCQSGFYRDP--EKPSTAPD 374
Query: 133 SC 134
SC
Sbjct: 375 SC 376
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 133 (51.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 58 DPTTTRRYFYSIKDISIGGRCRCNGHADVCDILDPEDP------YHRI---CRCQHNTCG 108
+P +Y++ D + G C CNGHAD C + P +H + C C+HNT G
Sbjct: 175 EPPALPAPYYAVYDFIVKGSCFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTAG 234
Query: 109 HNCEVCCPGYEQKAWRQS--QSNKPFSCE 135
+C+ C P Y + W+ + ++ P C+
Sbjct: 235 PHCQHCAPLYNDRPWQAADGKTGAPRECQ 263
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 78 CRCNGHADVC--DI---LDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQ---KAWRQSQS 128
C+CNGHAD C D+ L + +C CQHNT G +C+ C PG+ + K + +
Sbjct: 265 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA 324
Query: 129 NKPFSC 134
KP SC
Sbjct: 325 CKPCSC 330
>UNIPROTKB|G5E6L9 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 EMBL:DAAA02047467
Ensembl:ENSBTAT00000063836 Uniprot:G5E6L9
Length = 446
Score = 128 (50.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 74 IGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFS 133
+ GRC+C+GHA C D P CRC+H+T G CE C P + WR + P
Sbjct: 173 VRGRCQCHGHAARCAARD-RPPR---CRCRHHTTGPGCESCQPSHRDWPWRPATPRHPHP 228
Query: 134 C 134
C
Sbjct: 229 C 229
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 128 (50.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 74 IGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFS 133
+ GRC+C+GHA C D P CRC+H+T G CE C P + WR + P
Sbjct: 153 VRGRCQCHGHAARCAARD-RPPR---CRCRHHTTGPGCESCQPSHRDWPWRPATPRHPHP 208
Query: 134 C 134
C
Sbjct: 209 C 209
>RGD|1565197 [details] [associations]
symbol:Ntn5 "netrin 5" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 RGD:1565197 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OrthoDB:EOG402WS1
IPI:IPI00367517 Ensembl:ENSRNOT00000028524 UCSC:RGD:1565197
Uniprot:D3ZT86
Length = 448
Score = 124 (48.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 74 IGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFS 133
+ GRC+C+GHA C + P CRC+H+T G CE C P + WR + P
Sbjct: 169 VRGRCQCHGHAARC-AARAQPPR---CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHP 224
Query: 134 C 134
C
Sbjct: 225 C 225
>MGI|MGI:2685330 [details] [associations]
symbol:Ntn5 "netrin 5" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:2685330 GO:GO:0005576
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 EMBL:AC167242 HOGENOM:HOG000286017
GeneTree:ENSGT00700000104042 CTD:126147 eggNOG:NOG327968
HOVERGEN:HBG096704 OMA:GGPFLLT OrthoDB:EOG402WS1 EMBL:AK142898
EMBL:BC150901 IPI:IPI00876295 IPI:IPI00923643 RefSeq:NP_001028528.2
UniGene:Mm.291240 ProteinModelPortal:Q3UQ22 SMR:Q3UQ22 PRIDE:Q3UQ22
Ensembl:ENSMUST00000107742 GeneID:243967 KEGG:mmu:243967
InParanoid:Q3UQ22 NextBio:386070 CleanEx:MM_GM484
Genevestigator:Q3UQ22 Uniprot:Q3UQ22
Length = 452
Score = 124 (48.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 74 IGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFS 133
+ GRC+C+GHA C + P CRC+H+T G CE C P + WR + P
Sbjct: 169 VRGRCQCHGHAARC-ATRAQPPR---CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHP 224
Query: 134 C 134
C
Sbjct: 225 C 225
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 124 (48.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 74 IGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFS 133
+ GRC+C+GHA C + P CRC+H+T G CE C P + WR + P
Sbjct: 153 VRGRCQCHGHAARC-AARAQPPR---CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHP 208
Query: 134 C 134
C
Sbjct: 209 C 209
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 117 (46.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 74 IGGRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFS 133
+ GRC+C+GHA C P CRC+H+T G CE C P + WR + P
Sbjct: 153 VRGRCQCHGHAARC-AARARPPR---CRCRHHTTGLGCESCRPSHRDWPWRPATPWHPHP 208
Query: 134 C 134
C
Sbjct: 209 C 209
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 116 (45.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 76 GRCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSC 134
GRC+C+GHA C P C C+H+T G CE C P + WR + P C
Sbjct: 155 GRCQCHGHAARC-AARARPPR---CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPC 209
>UNIPROTKB|F5H520 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 HGNC:HGNC:6487
ChiTaRS:LAMB2 GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AC135506 IPI:IPI00743203 ProteinModelPortal:F5H520 SMR:F5H520
PRIDE:F5H520 Ensembl:ENST00000494831 ArrayExpress:F5H520
Bgee:F5H520 Uniprot:F5H520
Length = 151
Score = 98 (39.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 5 ENKITISLLDHRPSMKNFFNSTRLQEWTRATNVRLRLLRTKNLLGHLMSMADQDPTTTRR 64
E ++ +LD + + ++S R+Q + TN+R+ L R L +L+ D +
Sbjct: 65 EGEVIYRVLDPAIPIPDPYSS-RIQNLLKITNLRVNLTRLHTLGDNLL---DPRREIREK 120
Query: 65 YFYSIKDISIGGRCRCNGHADVC 87
Y+Y++ ++ + G C C GHA C
Sbjct: 121 YYYALYELVVRGNCFCYGHASEC 143
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 115 (45.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 78 CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH+D+C PE C RCQHNT G CE+C GY A + + +P +C
Sbjct: 1563 CECNGHSDLCH---PETG---ACSRCQHNTAGEFCELCATGYYGDATAGTPEDCQPCAC 1615
Score = 110 (43.8 bits), Expect = 0.00017, P = 0.00017
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 77 RCRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQKAWRQS-QSNKPFSC 134
RC C+GH++ C+ PE C+ CQH+T G +CE C PGY A R + Q +P C
Sbjct: 1158 RCNCHGHSETCE---PETG---ACQSCQHHTEGASCEQCQPGYYGDAQRGTPQDCQPCPC 1211
Score = 105 (42.0 bits), Expect = 0.00059, P = 0.00059
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 78 CRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGHA CD + Y CQHNT G C+ C PG+ A + + + +P C
Sbjct: 764 CNCNGHASSCDPV-----YGHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRPCPC 816
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 78 CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH+D+C PE C +CQHN G CE+C PGY A + + +P +C
Sbjct: 1563 CECNGHSDLCH---PETG---ACSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQPCAC 1615
Score = 104 (41.7 bits), Expect = 0.00090, P = 0.00090
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 77 RCRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSCE 135
RC C+GH++ C+ PE C+ CQH+T G CE C PGY + +Q P C+
Sbjct: 1158 RCSCHGHSEACE---PETG---ACQGCQHHTEGPRCEQCQPGY----YGDAQRGTPQDCQ 1207
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 109 (43.4 bits), Expect = 0.00026, P = 0.00026
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 77 RCRCNGHADVCDILDPEDPYHRICR-CQHNTCGHNCEVCCPGYEQKAWRQSQSNKPFSCE 135
RC C+GH +VC+ PE C+ CQH+T G CE C PGY + +Q P C+
Sbjct: 1137 RCSCHGHTEVCE---PETG---ACQECQHHTEGPRCEQCQPGY----YGDAQRGTPHDCQ 1186
Score = 106 (42.4 bits), Expect = 0.00055, P = 0.00055
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 78 CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWRQSQSN-KPFSC 134
C CNGH+D+C PE C +CQH+ G CE C PGY A + + +P +C
Sbjct: 1543 CECNGHSDLCH---PETG---ACSQCQHHAAGEFCEQCAPGYYGDATAGTPEDCQPCAC 1595
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 105 (42.0 bits), Expect = 0.00053, P = 0.00053
Identities = 22/48 (45%), Positives = 24/48 (50%)
Query: 77 RCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+C CNGHA CD Y CQHNT G CE C PG+ A R
Sbjct: 954 KCECNGHASQCD-----KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 105 (42.0 bits), Expect = 0.00053, P = 0.00053
Identities = 22/48 (45%), Positives = 24/48 (50%)
Query: 77 RCRCNGHADVCDILDPEDPYHRICRCQHNTCGHNCEVCCPGYEQKAWR 124
+C CNGHA CD Y CQHNT G CE C PG+ A R
Sbjct: 954 KCECNGHASQCD-----KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 101 (40.6 bits), Expect = 0.00065, P = 0.00065
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 65 YFYSIKDISIGG--RCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGY 118
Y+ IK G C CNGH++ C D +C CQHNT G +CE C GY
Sbjct: 49 YYRDIKSFPAGRCVPCNCNGHSNRCQ--DGSG----VCINCQHNTAGEHCERCQEGY 99
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 101 (40.6 bits), Expect = 0.00070, P = 0.00070
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 65 YFYSIKDISIGGR--CRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGY 118
Y+ IK G C CNGH++ C D +C CQHNT G +CE C GY
Sbjct: 63 YYRDIKSFPAGRSVPCNCNGHSNRCQ--DGSG----VCINCQHNTAGEHCERCKRGY 113
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 103 (41.3 bits), Expect = 0.00088, P = 0.00088
Identities = 26/65 (40%), Positives = 28/65 (43%)
Query: 72 ISIGGRCRCNGHADVCDILDPEDPYHRIC-RCQHNTCGHNCEVCCPGYEQKAWR-QSQSN 129
+ I C CNGHA CD P C CQH T G CE C PG+ R Q
Sbjct: 682 LGICAGCNCNGHASACD------PVSGHCLSCQHKTEGAQCEKCKPGFFGDPSRGQYDDC 735
Query: 130 KPFSC 134
KP C
Sbjct: 736 KPCPC 740
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.450 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 135 135 0.00091 102 3 11 22 0.38 31
30 0.44 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 153
No. of states in DFA: 604 (64 KB)
Total size of DFA: 169 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.71u 0.10s 13.81t Elapsed: 00:00:01
Total cpu time: 13.73u 0.10s 13.83t Elapsed: 00:00:01
Start: Thu Aug 15 15:29:56 2013 End: Thu Aug 15 15:29:57 2013
WARNINGS ISSUED: 1