Query psy5700
Match_columns 315
No_of_seqs 271 out of 2067
Neff 5.3
Searched_HMMs 46136
Date Sat Aug 17 00:26:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5700.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5700hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2670|consensus 100.0 6.7E-76 1.5E-80 556.4 15.3 213 1-220 1-222 (433)
2 COG0148 Eno Enolase [Carbohydr 100.0 8.1E-72 1.8E-76 540.1 20.4 207 2-222 3-217 (423)
3 PTZ00081 enolase; Provisional 100.0 5.1E-67 1.1E-71 520.9 22.1 211 1-220 2-228 (439)
4 PLN00191 enolase 100.0 1.6E-66 3.5E-71 519.3 22.2 210 1-220 26-243 (457)
5 PTZ00378 hypothetical protein; 100.0 7E-61 1.5E-65 479.3 18.9 187 1-204 49-243 (518)
6 cd03313 enolase Enolase: Enola 100.0 1.6E-56 3.4E-61 442.2 20.1 193 5-209 1-194 (408)
7 PRK08350 hypothetical protein; 100.0 3.4E-56 7.4E-61 426.6 18.4 163 2-205 3-165 (341)
8 PRK00077 eno enolase; Provisio 100.0 1.2E-55 2.7E-60 437.8 19.8 199 1-212 2-201 (425)
9 TIGR01060 eno phosphopyruvate 100.0 3.3E-55 7.1E-60 434.8 17.2 196 3-211 1-197 (425)
10 PF03952 Enolase_N: Enolase, N 100.0 3E-52 6.5E-57 355.4 14.3 131 2-134 1-132 (132)
11 KOG2670|consensus 100.0 1.1E-32 2.4E-37 262.2 5.4 90 221-310 1-106 (433)
12 PF03952 Enolase_N: Enolase, N 100.0 8.7E-32 1.9E-36 229.6 8.2 89 222-310 1-104 (132)
13 COG0148 Eno Enolase [Carbohydr 100.0 1E-30 2.2E-35 254.2 8.4 88 222-310 3-105 (423)
14 PTZ00081 enolase; Provisional 99.9 4.5E-28 9.7E-33 241.9 9.5 86 221-306 2-102 (439)
15 PLN00191 enolase 99.9 1E-26 2.3E-31 233.1 9.4 88 221-309 26-127 (457)
16 PRK00077 eno enolase; Provisio 99.9 1.1E-24 2.4E-29 216.8 9.7 90 221-310 2-106 (425)
17 TIGR01060 eno phosphopyruvate 99.9 1.2E-24 2.6E-29 216.5 8.8 87 223-309 1-102 (425)
18 PTZ00378 hypothetical protein; 99.9 2.5E-23 5.5E-28 209.4 11.6 106 185-309 19-145 (518)
19 cd03313 enolase Enolase: Enola 99.9 1.4E-23 3.1E-28 207.8 8.6 86 225-310 1-101 (408)
20 PRK08350 hypothetical protein; 99.9 1.8E-22 3.9E-27 194.4 8.3 74 222-309 3-90 (341)
21 PF00113 Enolase_C: Enolase, C 99.8 1.7E-19 3.8E-24 172.2 6.8 73 143-222 2-82 (295)
22 cd03327 MR_like_2 Mandelate ra 97.9 0.00011 2.4E-09 71.4 10.8 101 2-135 1-102 (341)
23 PRK15072 bifunctional D-altron 97.6 0.00054 1.2E-08 68.2 11.6 122 1-153 1-123 (404)
24 TIGR01502 B_methylAsp_ase meth 97.5 0.0013 2.9E-08 66.1 12.1 87 62-154 85-172 (408)
25 cd03321 mandelate_racemase Man 97.3 0.003 6.6E-08 61.6 12.4 123 1-153 1-137 (355)
26 cd03317 NAAAR N-acylamino acid 97.3 0.0016 3.5E-08 63.2 10.2 70 57-135 51-120 (354)
27 PF02746 MR_MLE_N: Mandelate r 97.3 0.0025 5.5E-08 52.4 9.5 91 17-135 26-117 (117)
28 cd03322 rpsA The starvation se 97.2 0.0031 6.8E-08 61.8 11.6 108 2-135 1-109 (361)
29 cd03314 MAL Methylaspartate am 96.9 0.0092 2E-07 59.3 11.7 82 65-153 51-135 (369)
30 PRK14017 galactonate dehydrata 96.9 0.0084 1.8E-07 59.2 11.4 105 1-135 1-107 (382)
31 PRK15440 L-rhamnonate dehydrat 96.9 0.0049 1.1E-07 61.6 9.4 65 67-135 83-149 (394)
32 cd03325 D-galactonate_dehydrat 96.7 0.021 4.6E-07 55.7 11.7 105 2-135 1-106 (352)
33 cd03316 MR_like Mandelate race 96.6 0.019 4.1E-07 55.6 10.8 123 2-154 1-134 (357)
34 TIGR02534 mucon_cyclo muconate 96.5 0.023 4.9E-07 55.7 10.5 97 17-135 27-124 (368)
35 cd03329 MR_like_4 Mandelate ra 96.3 0.051 1.1E-06 53.3 11.9 63 66-135 58-120 (368)
36 TIGR01928 menC_lowGC/arch o-su 96.1 0.044 9.6E-07 53.0 10.2 95 17-135 21-116 (324)
37 COG4948 L-alanine-DL-glutamate 96.1 0.046 9.9E-07 53.6 10.4 75 72-155 64-139 (372)
38 cd03328 MR_like_3 Mandelate ra 96.1 0.054 1.2E-06 53.0 10.7 66 67-135 54-120 (352)
39 cd03318 MLE Muconate Lactonizi 96.0 0.056 1.2E-06 52.8 10.3 69 58-135 56-125 (365)
40 cd03324 rTSbeta_L-fuconate_deh 94.3 0.65 1.4E-05 46.8 12.4 65 69-135 64-135 (415)
41 cd03323 D-glucarate_dehydratas 93.7 0.89 1.9E-05 45.4 11.8 66 66-135 54-130 (395)
42 cd03319 L-Ala-DL-Glu_epimerase 93.5 0.85 1.8E-05 43.6 11.0 64 62-135 54-117 (316)
43 TIGR03247 glucar-dehydr glucar 93.5 0.56 1.2E-05 47.7 10.2 62 72-135 63-133 (441)
44 cd03326 MR_like_1 Mandelate ra 93.1 0.47 1E-05 47.3 8.8 63 68-135 60-134 (385)
45 PF05034 MAAL_N: Methylasparta 87.7 1.7 3.7E-05 38.7 6.3 99 19-136 52-155 (159)
46 PRK15129 L-Ala-D/L-Glu epimera 79.2 10 0.00022 36.6 8.5 60 60-135 53-112 (321)
47 PLN02980 2-oxoglutarate decarb 72.4 30 0.00065 41.0 11.3 30 106-135 1035-1064(1655)
48 cd00308 enolase_like Enolase-s 56.7 11 0.00023 34.3 3.1 25 111-135 44-68 (229)
49 COG3799 Mal Methylaspartate am 40.6 39 0.00086 33.5 4.3 102 64-174 88-194 (410)
50 PRK05105 O-succinylbenzoate sy 36.6 84 0.0018 30.4 6.0 58 57-133 51-108 (322)
51 PF08670 MEKHLA: MEKHLA domain 34.5 65 0.0014 28.3 4.3 90 145-244 50-141 (148)
52 PRK15072 bifunctional D-altron 33.8 89 0.0019 31.2 5.8 28 221-250 1-28 (404)
53 PF06545 DUF1116: Protein of u 30.0 1.1E+02 0.0025 28.6 5.3 62 57-129 99-161 (216)
54 PTZ00340 O-sialoglycoprotein e 27.5 1.4E+02 0.003 29.8 5.8 88 106-206 80-171 (345)
55 cd03315 MLE_like Muconate lact 20.9 1E+02 0.0023 28.5 3.4 25 111-135 45-69 (265)
56 PF14535 AMP-binding_C_2: AMP- 20.0 1E+02 0.0022 24.3 2.7 46 190-235 51-96 (96)
No 1
>KOG2670|consensus
Probab=100.00 E-value=6.7e-76 Score=556.37 Aligned_cols=213 Identities=74% Similarity=1.080 Sum_probs=205.4
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCceEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
|.|.+|+||+||||||||||||+++|++|++||+||||||||.|||+||||+|+++|+||||.+||.|||+.|+|+|+++
T Consensus 1 m~~~kv~aR~I~dSRGnPTVEVdL~T~~G~fRaavPSGAStGi~EAlELrDgdK~~y~GkgV~kaV~niN~~i~pali~~ 80 (433)
T KOG2670|consen 1 MSIIKVKARQIYDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSKYMGKGVLKAVGNINNTIAPALIKK 80 (433)
T ss_pred CCceeeehhhhhhcCCCCceeEEEEecCcceEeecCCCCccchhhhhheecCCcceecchhHHHHHHHHHHHHHHHHHcc
Confidence 66778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCC-CcccceeeeEeecCccCC
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS-NIILPVPAFNVINGGSHA 159 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~-~~~lP~P~~nvinGG~ha 159 (315)
+++++||+.||++|++||||+|||++|+|+||+||||+|||+|..+++|||+||+++.|+. ++.||+|.|||||||+||
T Consensus 81 ~~dv~~Q~~iD~~mi~LDGTeNKsklGaNaIlgvSlavckagAa~k~vplykhia~lag~~~~~vlPVPaFNVlNGGsHA 160 (433)
T KOG2670|consen 81 NLDVTDQKAIDNFMIELDGTENKSKLGANAILGVSLAVCKAGAAEKGVPLYKHIADLAGNKQPYVLPVPAFNVLNGGSHA 160 (433)
T ss_pred CCChhhHHHHHHHHHhccCCcccccccchhhHHHHHHHHhhhhhhcCCcHHHHHHHhcCCCCceEecccceeeecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999987 689999999999999999
Q ss_pred CCcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCccee--------eccCCcc
Q psy5700 160 GNKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQVFV--------RFYSSVR 220 (315)
Q Consensus 160 ~n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~~~~--------~~~~s~r 220 (315)
||+|+||||||.|+| |.|| +|||||++||||+||.++++|||..+-. |+.++++
T Consensus 161 Gn~lAmQEfMIlP~g-----a~sf--~eamr~GsevYh~LK~vik~kyG~~a~nVGDEGGfAPnI~~~~ 222 (433)
T KOG2670|consen 161 GNKLAMQEFMILPVG-----ADSF--AEAMRMGSEVYHHLKSVIKEKYGADATNVGDEGGFAPNIQTNE 222 (433)
T ss_pred cchhhhhhheecccC-----chhH--HHHHHHhHHHHHHHHHHHHHHhCccccccccccCcCCCccchH
Confidence 999999999999999 9999 9999999999999999999999986533 7777765
No 2
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-72 Score=540.11 Aligned_cols=207 Identities=59% Similarity=0.866 Sum_probs=198.1
Q ss_pred CeeEEEEeEEeCCCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 2 PISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 2 ~I~~v~ar~IlDsrG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
.|++|++|+||||||||||||||+|++|. +||+||||||||.+||+|+||+| +||.||||.+||++||++|+|+|+
T Consensus 3 ~I~~i~aReIlDSRGnpTVEveV~~~~g~~g~a~vPSGAStG~~EavElrdgd-~ry~gkGV~~AV~nVn~~Iap~Li-- 79 (423)
T COG0148 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGD-SRYLGKGVLKAVANVNEIIAPALI-- 79 (423)
T ss_pred ccceeEEEEEEcCCCCceEEEEEEEcCCCcceeecCCCCCCCCceeEEecCCc-cccccccHHHHHHHHHHHHHHHHc--
Confidence 39999999999999999999999999886 79999999999999999999999 899999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEeecCccCCC
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (315)
|+|++||..||++|+++|||+|||++|+|+|||||||+|||||+++++|||+||+ |...++||+||+||||||+||+
T Consensus 80 G~da~dQ~~ID~~lielDGT~Nks~lGaNailgVSlAvAkAAA~~l~~PLy~YlG---G~~a~~lPvPm~NvinGG~HA~ 156 (423)
T COG0148 80 GLDATDQALIDSLLIELDGTENKSKLGANAILGVSLAVAKAAAASLGIPLYRYLG---GLNALVLPVPMMNVINGGAHAD 156 (423)
T ss_pred CCCcccHHHHHHHHHHccCCCcccccccHHHHHHHHHHHHHHHHhcCCcHHHHhc---CccccccccceeeeecccccCC
Confidence 7999999999999999999999999999999999999999999999999999996 7678899999999999999999
Q ss_pred CcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCccee-------eccCCccce
Q psy5700 161 NKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQVFV-------RFYSSVRMP 222 (315)
Q Consensus 161 n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~~~~-------~~~~s~r~~ 222 (315)
|.+|||||||+|.| +.+| +|+++|++||||+||++|+++ |..+.+ |.++++...
T Consensus 157 n~~d~QEFmI~p~g-----a~sf--~ealr~~~ev~h~lk~~l~~~-g~~t~vGDEGgfAP~l~~~eea 217 (423)
T COG0148 157 NNLDIQEFMIMPVG-----AESF--KEALRAGAEVFHHLKKLLKEK-GLSTGVGDEGGFAPNLKSNEEA 217 (423)
T ss_pred CCccceeEEEeecC-----hHHH--HHHHHHHHHHHHHHHHHHhhc-CccccccCCcccCCCCCccHHH
Confidence 99999999999999 9999 999999999999999999999 887765 777777643
No 3
>PTZ00081 enolase; Provisional
Probab=100.00 E-value=5.1e-67 Score=520.88 Aligned_cols=211 Identities=65% Similarity=0.962 Sum_probs=199.9
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCceEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
|+|++|++|+||||||||||||||+|++|++||+||||||||.+||+||||+|+++|+||||.+||++||+.|+|+|+
T Consensus 2 ~~I~~v~~r~i~dSrg~ptvev~v~~~~G~~~a~~psgastG~~Ea~elrd~~~~~y~g~gv~~Av~~v~~~i~~~Li-- 79 (439)
T PTZ00081 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVENVNEIIAPALI-- 79 (439)
T ss_pred cEEEEEEEEEEecCCCCceEEEEEEECCCCEEEecccCCCCceeeEeeccCCCccccCCccHHHHHHHHHHHHHHHHc--
Confidence 679999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHh-hcCCCC-----CCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCC--CCcccceeeeEe
Q psy5700 81 SFEVTQQKEIDEFMIK-LDGTEN-----KSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN--SNIILPVPAFNV 152 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~-ldgT~n-----ks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~--~~~~lP~P~~nv 152 (315)
|++++||++||++|++ ||||+| |+++|+|+|+|||||+|||+|+.+++|||+||++++|. .+++||+||+||
T Consensus 80 G~d~~dq~~iD~~l~~~ldgt~n~~~~~ks~lGanailavS~A~a~AaA~~~~~PLy~yL~~~~g~~~~~~~lP~P~~ni 159 (439)
T PTZ00081 80 GKDVTDQKKLDKLMVEQLDGTKNEWGWCKSKLGANAILAVSMAVARAAAAAKGVPLYKYLAQLAGKPTDKFVLPVPCFNV 159 (439)
T ss_pred CCChhhHHHHHHHHHHhccCCcccccccccccchHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCCccCCccccceeEEe
Confidence 8999999999999999 999999 99999999999999999999999999999999887664 467899999999
Q ss_pred ecCccCCCCcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCc-cee-------eccCCcc
Q psy5700 153 INGGSHAGNKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQ-VFV-------RFYSSVR 220 (315)
Q Consensus 153 inGG~ha~n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~-~~~-------~~~~s~r 220 (315)
||||+|++|+++||||||+|.+ +.+| .|+|||++||||+||++|+++||.. +.+ |.++++.
T Consensus 160 inGG~ha~~~~~~qefmi~P~g-----a~s~--~ea~~~~~ev~~~l~~il~~~~g~~~~~vgdeGgfap~~~~~e 228 (439)
T PTZ00081 160 INGGKHAGNKLAFQEFMIAPVG-----APSF--KEALRMGAEVYHSLKSVIKKKYGLDATNVGDEGGFAPNIKDPE 228 (439)
T ss_pred ccCcccccccccceEEeeccCC-----CCCH--HHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCcCCCCCCHH
Confidence 9999999999999999999999 9999 9999999999999999999999875 323 5565554
No 4
>PLN00191 enolase
Probab=100.00 E-value=1.6e-66 Score=519.35 Aligned_cols=210 Identities=70% Similarity=1.038 Sum_probs=199.2
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCceEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
|+|++|++|+||||||||||||||+|++|.+||+||||||||.+||+|+||++++ |+|+||.+||++||+.|+|+|+
T Consensus 26 ~~I~~v~~r~ildsrG~PtVeveV~~~~G~~~a~~psgastG~~Ea~elrd~~~~-~~g~gv~~Av~~v~~~ia~~Li-- 102 (457)
T PLN00191 26 ATITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALELRDGDKD-YLGKGVLKAVKNVNEIIAPALI-- 102 (457)
T ss_pred CeeeEEEEEEEEcCCCCeEEEEEEEECCCCEEEEeccCCCCCcceeeeccCCCcc-cCCccHHHHHHHHHHHHHHHHc--
Confidence 4699999999999999999999999999988999999999999999999999987 9999999999999999999998
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEeecCccCCC
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (315)
|++++||++||++|+++|||+||+++|+|+|+|||||+|||+|+.+++|||+||++++|....+||+||+||||||+|++
T Consensus 103 G~~~~dq~~iD~~l~~ldgt~nk~~lGanailavS~A~a~AaA~~~~~PLy~~l~~~gg~~~~~lP~p~~niinGG~ha~ 182 (457)
T PLN00191 103 GMDPTDQTQIDNFMLELDGTPNKGKLGANAILAVSLAVCKAGAAEKGVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAG 182 (457)
T ss_pred CCChhhHHHHHHHHHHccCCCCccccchhHHHHHHHHHHHHHHHHcCCcHHHHHHhhCCCCCccccceeEEeecCccccc
Confidence 89999999999999999999999999999999999999999999999999999988877667799999999999999999
Q ss_pred CcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCc-cee-------eccCCcc
Q psy5700 161 NKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQ-VFV-------RFYSSVR 220 (315)
Q Consensus 161 n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~-~~~-------~~~~s~r 220 (315)
|.++||||||+|.+ +.+| +|+|||++||||+||++|+++||.. +.+ |.++++.
T Consensus 183 ~~~~~qefmi~P~g-----a~s~--~ea~~~~~ev~~~l~~il~~~~g~~~~~vgdeGg~ap~~~~~~ 243 (457)
T PLN00191 183 NKLAMQEFMILPVG-----ASSF--KEAMQMGSEVYHHLKAVIKKKYGQDACNVGDEGGFAPNIQDNK 243 (457)
T ss_pred cccchheeeecCCC-----CCCH--HHHHHHHHHHHHHHHHHHHHhcCCCcCccCCCCCcCCCCCCHH
Confidence 99999999999999 9999 9999999999999999999999885 433 5555554
No 5
>PTZ00378 hypothetical protein; Provisional
Probab=100.00 E-value=7e-61 Score=479.34 Aligned_cols=187 Identities=22% Similarity=0.316 Sum_probs=174.8
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCceEEEEeecCCCCcceeeeEeecCCccc-c-ccccchhhHhhHHHhHHHHHH
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAH-Y-HGKGVTKAVGFINNDIAPALL 78 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g~~~a~~PsGaS~g~~Ea~el~d~~~~~-~-~GkgV~~Av~~vn~~i~p~Li 78 (315)
++|++|++||||||||||||||+|+|.+|.. |||||||| ||+||||+++.+ | .||||.+||+ +.|+|+|+
T Consensus 49 ~~I~~i~areIlDSrGnPTVev~v~l~~G~~---vPSGAStG--EA~elRDgd~~~~~g~gkgV~~Av~---~~i~p~Li 120 (518)
T PTZ00378 49 DEIRALVHNEVLSPAGETVLRFTLELLNGME---VSSGALLS--PSHGERDGEADATLDPAEYTTEALQ---NSYFPRLL 120 (518)
T ss_pred CeeeEEEEEEEEcCCCCeeEEEEEEECCCCE---ECCCCccc--ceeeeecCCcccccCCCccHHHHHH---hhhHHHHc
Confidence 4699999999999999999999999999964 99999999 999999999876 8 8999999999 57999999
Q ss_pred hCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCC----CCcccceeeeEeec
Q psy5700 79 KESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN----SNIILPVPAFNVIN 154 (315)
Q Consensus 79 ~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~----~~~~lP~P~~nvin 154 (315)
|++++||++||++|+++|||+||+++|+|+|+|||||+|||||+++++|||+||+.+.+. .++.||+|||||||
T Consensus 121 --g~~~~dQ~~iD~~Li~lDGT~nks~lGaNailavS~A~akAAA~~~~~PLy~yL~~~~~~~~~~~~~~lP~P~~Niin 198 (518)
T PTZ00378 121 --QLGARDQREFDSTLRAALSTSPLANVGSAVQWALSIVASLAAARCRSVPLFQYLRALFGSLTSVETFSMPQLCITFFG 198 (518)
T ss_pred --CCChHhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHcCCCHHHHhhccccccccCCCcccCccceEeec
Confidence 899999999999999999999999999999999999999999999999999999865432 46789999999999
Q ss_pred CccCCCCcCcceEEEEeecCCccccc--cccChHHHHHHHHHHHHHHHHHHH
Q psy5700 155 GGSHAGNKLAMQEFMILPTGKLRRVA--SSFLLREAMKIGSEVYHHLKKVIN 204 (315)
Q Consensus 155 GG~ha~n~l~iQEfmiiP~g~~~~~a--~s~~~~Eai~~~~eVy~~lk~il~ 204 (315)
||+||+|+++||||||+|.| + .+| +|+|||++||||+|++.+.
T Consensus 199 GG~HA~n~l~iQEFmI~P~g-----a~g~s~--~ealr~~~evyh~L~~~~~ 243 (518)
T PTZ00378 199 PGNPSTARLALKSVLFSPVM-----PSGTVL--RERMQKIFAAFHHFCQSHN 243 (518)
T ss_pred CccCCCCCCCceEEEEeeCC-----CCCCCH--HHHHHHHHHHHHHHhhccc
Confidence 99999999999999999998 8 899 9999999999999966443
No 6
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=100.00 E-value=1.6e-56 Score=442.21 Aligned_cols=193 Identities=66% Similarity=0.967 Sum_probs=185.6
Q ss_pred EEEEeEEeCCCCCceEEEEEEECCc-eEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCCCC
Q psy5700 5 KIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFE 83 (315)
Q Consensus 5 ~v~ar~IlDsrG~pTvEveV~~~~g-~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g~~ 83 (315)
+|++||||||||+|||||+|+|++| +++++||||+|+|.|||+|+||+|+.+|.|+||.+|+++||+.|+|+|+ |+|
T Consensus 1 ~v~~r~i~dsrg~ptvev~v~~~~g~~g~a~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~i~~~iap~Li--G~d 78 (408)
T cd03313 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVKNVNEIIAPALI--GMD 78 (408)
T ss_pred CeEEEEEecCCCCceEEEEEEECCCCEEEEeecCCCCCCcceeeecCCCCcccccCCcHHHHHHHHHHHHHHHHc--CCC
Confidence 5899999999999999999999877 5899999999999999999999999999999999999999999999998 899
Q ss_pred ccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEeecCccCCCCcC
Q psy5700 84 VTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKL 163 (315)
Q Consensus 84 ~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~n~l 163 (315)
+.||++||++|+++|||+||+++|+||++|||||+|+|+|+.+|+|||+||+ |....+||+|++||||||+|+++++
T Consensus 79 ~~dq~~id~~l~~~dgt~~~~~~G~nAi~avsiAl~da~A~~~g~PLy~~Lg---g~~~~~lpvp~~nvi~GG~ha~~~~ 155 (408)
T cd03313 79 VTDQRAIDKLLIELDGTPNKSKLGANAILGVSLAVAKAAAAALGLPLYRYLG---GLAAYVLPVPMFNVINGGAHAGNKL 155 (408)
T ss_pred hhhHHHHHHHHHHhcCCCcccccchHHHHHHHHHHHHHHHHHcCCcHHHHhc---CCCCcccceeeEEEecCcccccCcc
Confidence 9999999999999999999999999999999999999999999999999996 5556689999999999999999999
Q ss_pred cceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCC
Q psy5700 164 AMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRK 209 (315)
Q Consensus 164 ~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~ 209 (315)
+||||||+|.+ +.+| +|+++++.++||++|++|++++|.
T Consensus 156 ~iqe~~i~p~~-----~~~~--~ea~~~~~~~~~~lK~~l~~~~g~ 194 (408)
T cd03313 156 DFQEFMIVPVG-----APSF--SEALRMGAEVYHTLKKVLKKKGGL 194 (408)
T ss_pred ccccccccccC-----ccCH--HHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999999999 9999 999999999999999999999763
No 7
>PRK08350 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-56 Score=426.64 Aligned_cols=163 Identities=34% Similarity=0.546 Sum_probs=153.8
Q ss_pred CeeEEEEeEEeCCCCCceEEEEEEECCceEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCC
Q psy5700 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (315)
Q Consensus 2 ~I~~v~ar~IlDsrG~pTvEveV~~~~g~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g 81 (315)
+|.+|+|||||||||||||||||+|++|++||+||| |+|+.+|+ +||.+||++||+.|+|+|+ |
T Consensus 3 ~I~~i~aReIlDSRGnPTVEveV~~~~g~gra~vPS-------------D~d~~ry~-~gV~~AV~nVn~~Iap~Li--G 66 (341)
T PRK08350 3 VIENIIGRVAVLRGGKYSVEVDVITDSGFGRFAAPI-------------DENPSLYI-AEAHRAVSEVDEIIGPELI--G 66 (341)
T ss_pred eeEEEEEEEEEcCCCCceEEEEEEECCcEEEEEecC-------------CCCccccc-chHHHHHHHHHHHHHHHHc--C
Confidence 599999999999999999999999999999999999 67778899 9999999999999999999 8
Q ss_pred CCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEeecCccCCCC
Q psy5700 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGN 161 (315)
Q Consensus 82 ~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~n 161 (315)
++++||++||++|+++|||+|||++|+|||||||||+|||||+.+++|||+||+ |.....||+|||||||||
T Consensus 67 ~d~~dQ~~ID~~mielDGT~nKs~lGaNAiLavS~A~akAaA~~~~~PLy~ylg---g~~~~~lPvP~~NiiNGG----- 138 (341)
T PRK08350 67 FDASEQELIDSYLWEIDGTEDFSHIGANTALAVSVAVAKAAANSKNMPLYSYIG---GTFTTELPVPILEFAEDE----- 138 (341)
T ss_pred CCHHHHHHHHHHHHhccCCccccccCchhhHHHHHHHHHHHHHHcCCcHHHHhc---CCCCCccCccceeeecCC-----
Confidence 999999999999999999999999999999999999999999999999999995 545678999999999998
Q ss_pred cCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHH
Q psy5700 162 KLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINT 205 (315)
Q Consensus 162 ~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~ 205 (315)
++ ||||+| +|+|| ++||||+||++|++
T Consensus 139 --~~-EFmI~p-------------~ea~~-~~ev~~~lk~il~~ 165 (341)
T PRK08350 139 --NF-EYYVLV-------------RDLME-ITDVVDAVNKILEN 165 (341)
T ss_pred --ce-EEEECc-------------hHhhh-hHHHHHHHHHHHhh
Confidence 45 999998 56888 78999999999987
No 8
>PRK00077 eno enolase; Provisional
Probab=100.00 E-value=1.2e-55 Score=437.82 Aligned_cols=199 Identities=59% Similarity=0.897 Sum_probs=189.6
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCc-eEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHh
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g-~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~ 79 (315)
|+|++|++|+||||||+|||||+|+|++| +++++||||+|||.|||+|+||+|+++|+||||.+|+++||+.|+|+|+
T Consensus 2 ~~I~~v~~r~i~dsrg~ptvev~v~~~~g~~g~a~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~v~~~iap~Li- 80 (425)
T PRK00077 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLGKGVLKAVENVNEEIAPALI- 80 (425)
T ss_pred CeEEEEEEEEEEcCCCCeEEEEEEEECCCCEEEEEEeccCCCCcceeeecCCCCccccCCcCHHHHHHHHHHHHHHHHc-
Confidence 46999999999999999999999999999 5899999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEeecCccCC
Q psy5700 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (315)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (315)
|+||.||++||+.|+++|||+|++++|+|+++|||||+|+|+|+.+|+|||+||+ |....++|+|++|+||||+|+
T Consensus 81 -G~d~~d~~~id~~l~~ldgt~~~~~~G~nAi~avsiAl~da~ak~~g~PLy~lLG---G~~~~~~pvp~~n~i~GG~ha 156 (425)
T PRK00077 81 -GLDALDQRAIDKAMIELDGTPNKSKLGANAILGVSLAVAKAAADSLGLPLYRYLG---GPNAKVLPVPMMNIINGGAHA 156 (425)
T ss_pred -CCChhhHHHHHHHHHHhhCccccCccchHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCcccccceeEEEEcccccc
Confidence 8999999999999999999999999999999999999999999999999999996 544557999999999999999
Q ss_pred CCcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCcce
Q psy5700 160 GNKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQVF 212 (315)
Q Consensus 160 ~n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~~~ 212 (315)
+++++||||||+|.+ +.+| +|+++++.++||++|++|+++ |..+.
T Consensus 157 ~~~~~~qe~~i~p~~-----~~~~--~ea~~~~~~~~~~lK~~l~~~-g~~~~ 201 (425)
T PRK00077 157 DNNVDIQEFMIMPVG-----APSF--KEALRMGAEVFHTLKKVLKEK-GLSTA 201 (425)
T ss_pred cCchhhhHhhcCCcc-----cCCH--HHHHHHHHHHHHHHHHHHHhc-CCCCc
Confidence 999999999999999 9999 999999999999999999988 65443
No 9
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=100.00 E-value=3.3e-55 Score=434.79 Aligned_cols=196 Identities=61% Similarity=0.924 Sum_probs=187.2
Q ss_pred eeEEEEeEEeCCCCCceEEEEEEECCc-eEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCC
Q psy5700 3 ISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (315)
Q Consensus 3 I~~v~ar~IlDsrG~pTvEveV~~~~g-~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g 81 (315)
|++|++|+||||||+|||||||+|++| ++|++||||||||.|||+|+||+|+++|+||||.+|+++|++.|+|+|+ |
T Consensus 1 i~~i~~r~i~dsrg~ptvev~v~~~~g~~g~~~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~i~~~iap~Li--G 78 (425)
T TIGR01060 1 IKDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKGVLKAVENVNDIIAPALI--G 78 (425)
T ss_pred CcEEEEEEEecCCCCceEEEEEEECCCCEEEEeccCCCCCCcceeeeccCCCccccCCcCHHHHHHHHHHHHHHHHc--C
Confidence 789999999999999999999999988 5899999999999999999999999899999999999999999999999 7
Q ss_pred CCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEeecCccCCCC
Q psy5700 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGN 161 (315)
Q Consensus 82 ~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~n 161 (315)
+||.||++||+.|+++|+|++|+++|+|+++|||||+++|+|+.+|+|||+||+ |....+||+|++|+||||+|+++
T Consensus 79 ~d~~d~~~id~~l~~~d~t~~~~~~G~nAi~avs~Al~da~ak~~g~Ply~lLG---G~~~~~lPvp~~n~i~GG~~a~~ 155 (425)
T TIGR01060 79 MDAFDQREIDQIMIELDGTPNKSKLGANAILGVSMAVAKAAAKSLGLPLYRYLG---GKNAYVLPVPMMNIINGGAHADN 155 (425)
T ss_pred CCHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCCceeeEEEEeecccccccC
Confidence 999999999999999999999999999999999999999999999999999996 54456899999999999999999
Q ss_pred cCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy5700 162 KLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQV 211 (315)
Q Consensus 162 ~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~~ 211 (315)
.+++|||||+|.+ +.+| +|+++++.++|++||++|++| |...
T Consensus 156 ~~~~qe~~i~p~~-----a~~~--~e~~~~~~~g~~~lK~~l~~~-~~~~ 197 (425)
T TIGR01060 156 NLDFQEFMIMPVG-----AKSF--REALRMGAEVFHALKKLLKEK-GLAT 197 (425)
T ss_pred ccCHHHHhccccc-----hHHH--HHHHHHHHHHHHHHHHHHHhc-CCCC
Confidence 9999999999999 9999 999999999999999999887 5443
No 10
>PF03952 Enolase_N: Enolase, N-terminal domain; InterPro: IPR020811 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ]. In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3OTR_F 3QTP_A 1PDY_A 1PDZ_A 3TQP_B 2PTZ_A 2PTW_A ....
Probab=100.00 E-value=3e-52 Score=355.35 Aligned_cols=131 Identities=63% Similarity=0.906 Sum_probs=115.9
Q ss_pred CeeEEEEeEEeCCCCCceEEEEEEECCc-eEEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 2 PISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 2 ~I~~v~ar~IlDsrG~pTvEveV~~~~g-~~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
+|++|++||||||||+|||||||+|++| ++|++||||+|+|.|||+|+||+++++|+||||.+||+|||+.|+|+|+
T Consensus 1 ~I~~v~~r~IlDsrG~PTVEveV~~~~g~~~ra~~PsGaStG~~Ea~elrD~~~~~~~gkgV~~Av~~vn~~i~~~L~-- 78 (132)
T PF03952_consen 1 TITKVKAREILDSRGNPTVEVEVFTSNGNVGRASVPSGASTGSHEAVELRDGDPERYGGKGVSKAVENVNEIIAPALI-- 78 (132)
T ss_dssp BEEEEEEEEEE-TTS-EEEEEEEEETTEEEEEEE--B-SSSSSSS-B---B-STTSGGGTBHHHHHHHHHHTHHHHHT--
T ss_pred CeEEEEEEEEEcCCCCceEEEEEEECCcccceeccccccCCCccccccccCCCcceecCcccchhhhhHHHHHHHHHH--
Confidence 6999999999999999999999999999 6999999999999999999999999999999999999999999999998
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHH
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHL 134 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi 134 (315)
|++++||++||++|+++|||+||+++|+|+++|+|||+|||+|+.+++|||+||
T Consensus 79 g~~~~dQ~~iD~~L~~lDgT~nk~~lGaNa~lavS~A~a~AaA~~~~~pL~~~l 132 (132)
T PF03952_consen 79 GLDPTDQEEIDQILIELDGTPNKSRLGANAILAVSLAVAKAAAAAKGIPLYRYL 132 (132)
T ss_dssp TSBTT-HHHHHHHHHHHHTSTTSTTT-HHHHHHHHHHHHHHHHHHHTS-HHHHH
T ss_pred hcchhhHHHhCccceeccCChhhhcccchHHHHHHHHHHHHHHHHcCCChhhcC
Confidence 799999999999999999999999999999999999999999999999999997
No 11
>KOG2670|consensus
Probab=99.97 E-value=1.1e-32 Score=262.24 Aligned_cols=90 Identities=74% Similarity=1.035 Sum_probs=85.6
Q ss_pred ceeeEEEeeeeecCCCCccEEEEEEECCceEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh-
Q psy5700 221 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK- 299 (315)
Q Consensus 221 ~~I~~v~ar~ilDSRG~pTVev~v~~~~g~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~- 299 (315)
|.|.+|+||+|+|||||||||||++|++|++||+||||||||+|||+|||||||.+|+||||++||+|||+.|+|+|++
T Consensus 1 m~~~kv~aR~I~dSRGnPTVEVdL~T~~G~fRaavPSGAStGi~EAlELrDgdK~~y~GkgV~kaV~niN~~i~pali~~ 80 (433)
T KOG2670|consen 1 MSIIKVKARQIYDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSKYMGKGVLKAVGNINNTIAPALIKK 80 (433)
T ss_pred CCceeeehhhhhhcCCCCceeEEEEecCcceEeecCCCCccchhhhhheecCCcceecchhHHHHHHHHHHHHHHHHHcc
Confidence 4455699999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---------------hcCCCCCCCCC
Q psy5700 300 ---------------EVGTSNNFSSN 310 (315)
Q Consensus 300 ---------------~~dgt~~~s~~ 310 (315)
++|||+|-|+-
T Consensus 81 ~~dv~~Q~~iD~~mi~LDGTeNKskl 106 (433)
T KOG2670|consen 81 NLDVTDQKAIDNFMIELDGTENKSKL 106 (433)
T ss_pred CCChhhHHHHHHHHHhccCCcccccc
Confidence 69999998873
No 12
>PF03952 Enolase_N: Enolase, N-terminal domain; InterPro: IPR020811 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ]. In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3OTR_F 3QTP_A 1PDY_A 1PDZ_A 3TQP_B 2PTZ_A 2PTW_A ....
Probab=99.97 E-value=8.7e-32 Score=229.62 Aligned_cols=89 Identities=57% Similarity=0.771 Sum_probs=75.6
Q ss_pred eeeEEEeeeeecCCCCccEEEEEEECCc-eEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh-
Q psy5700 222 PISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK- 299 (315)
Q Consensus 222 ~I~~v~ar~ilDSRG~pTVev~v~~~~g-~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~- 299 (315)
+|++|++||||||||+|||||+|++++| ++|++||||||||.|||+||||+++.+|+||||.+||++||+.|+|+|++
T Consensus 1 ~I~~v~~r~IlDsrG~PTVEveV~~~~g~~~ra~~PsGaStG~~Ea~elrD~~~~~~~gkgV~~Av~~vn~~i~~~L~g~ 80 (132)
T PF03952_consen 1 TITKVKAREILDSRGNPTVEVEVFTSNGNVGRASVPSGASTGSHEAVELRDGDPERYGGKGVSKAVENVNEIIAPALIGL 80 (132)
T ss_dssp BEEEEEEEEEE-TTS-EEEEEEEEETTEEEEEEE--B-SSSSSSS-B---B-STTSGGGTBHHHHHHHHHHTHHHHHTTS
T ss_pred CeEEEEEEEEEcCCCCceEEEEEEECCcccceeccccccCCCccccccccCCCcceecCcccchhhhhHHHHHHHHHHhc
Confidence 5899999999999999999999999999 58999999999999999999999988999999999999999999999988
Q ss_pred -------------hcCCCCCCCCC
Q psy5700 300 -------------EVGTSNNFSSN 310 (315)
Q Consensus 300 -------------~~dgt~~~s~~ 310 (315)
++|||+|+|+-
T Consensus 81 ~~~dQ~~iD~~L~~lDgT~nk~~l 104 (132)
T PF03952_consen 81 DPTDQEEIDQILIELDGTPNKSRL 104 (132)
T ss_dssp BTT-HHHHHHHHHHHHTSTTSTTT
T ss_pred chhhHHHhCccceeccCChhhhcc
Confidence 89999999873
No 13
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1e-30 Score=254.23 Aligned_cols=88 Identities=59% Similarity=0.777 Sum_probs=84.9
Q ss_pred eeeEEEeeeeecCCCCccEEEEEEECCce-EEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh-
Q psy5700 222 PISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK- 299 (315)
Q Consensus 222 ~I~~v~ar~ilDSRG~pTVev~v~~~~g~-~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~- 299 (315)
.|++|.+|+||||||||||||+|+|++|+ +||+||||||||+|||+||||+| .+|.||||++||+|||++|+|+|++
T Consensus 3 ~I~~i~aReIlDSRGnpTVEveV~~~~g~~g~a~vPSGAStG~~EavElrdgd-~ry~gkGV~~AV~nVn~~Iap~LiG~ 81 (423)
T COG0148 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGD-SRYLGKGVLKAVANVNEIIAPALIGL 81 (423)
T ss_pred ccceeEEEEEEcCCCCceEEEEEEEcCCCcceeecCCCCCCCCceeEEecCCc-cccccccHHHHHHHHHHHHHHHHcCC
Confidence 59999999999999999999999999997 69999999999999999999999 7999999999999999999999998
Q ss_pred -------------hcCCCCCCCCC
Q psy5700 300 -------------EVGTSNNFSSN 310 (315)
Q Consensus 300 -------------~~dgt~~~s~~ 310 (315)
++|||+|||+-
T Consensus 82 da~dQ~~ID~~lielDGT~Nks~l 105 (423)
T COG0148 82 DATDQALIDSLLIELDGTENKSKL 105 (423)
T ss_pred CcccHHHHHHHHHHccCCCccccc
Confidence 99999999984
No 14
>PTZ00081 enolase; Provisional
Probab=99.95 E-value=4.5e-28 Score=241.94 Aligned_cols=86 Identities=70% Similarity=0.981 Sum_probs=83.8
Q ss_pred ceeeEEEeeeeecCCCCccEEEEEEECCceEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh-
Q psy5700 221 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK- 299 (315)
Q Consensus 221 ~~I~~v~ar~ilDSRG~pTVev~v~~~~g~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~- 299 (315)
|+|++|++|+||||||||||||+|+|++|.+||+||||||||.|||+||||+|+.+|.||||.+||+|||+.|+|+|++
T Consensus 2 ~~I~~v~~r~i~dSrg~ptvev~v~~~~G~~~a~~psgastG~~Ea~elrd~~~~~y~g~gv~~Av~~v~~~i~~~LiG~ 81 (439)
T PTZ00081 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVENVNEIIAPALIGK 81 (439)
T ss_pred cEEEEEEEEEEecCCCCceEEEEEEECCCCEEEecccCCCCceeeEeeccCCCccccCCccHHHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999988999999999999999999999988999999999999999999999988
Q ss_pred -------------h-cCCCCC
Q psy5700 300 -------------E-VGTSNN 306 (315)
Q Consensus 300 -------------~-~dgt~~ 306 (315)
+ +|||+|
T Consensus 82 d~~dq~~iD~~l~~~ldgt~n 102 (439)
T PTZ00081 82 DVTDQKKLDKLMVEQLDGTKN 102 (439)
T ss_pred ChhhHHHHHHHHHHhccCCcc
Confidence 7 999999
No 15
>PLN00191 enolase
Probab=99.93 E-value=1e-26 Score=233.10 Aligned_cols=88 Identities=67% Similarity=0.930 Sum_probs=84.8
Q ss_pred ceeeEEEeeeeecCCCCccEEEEEEECCceEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh-
Q psy5700 221 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK- 299 (315)
Q Consensus 221 ~~I~~v~ar~ilDSRG~pTVev~v~~~~g~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~- 299 (315)
|+|++|++|+||||||||||||+|+|++|.+|++||||||||.|||+||||+++. |.||||.+||++||+.|+|+|++
T Consensus 26 ~~I~~v~~r~ildsrG~PtVeveV~~~~G~~~a~~psgastG~~Ea~elrd~~~~-~~g~gv~~Av~~v~~~ia~~LiG~ 104 (457)
T PLN00191 26 ATITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALELRDGDKD-YLGKGVLKAVKNVNEIIAPALIGM 104 (457)
T ss_pred CeeeEEEEEEEEcCCCCeEEEEEEEECCCCEEEEeccCCCCCcceeeeccCCCcc-cCCccHHHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999988999999999999999999999986 99999999999999999999988
Q ss_pred -------------hcCCCCCCCC
Q psy5700 300 -------------EVGTSNNFSS 309 (315)
Q Consensus 300 -------------~~dgt~~~s~ 309 (315)
++|||+|+|+
T Consensus 105 ~~~dq~~iD~~l~~ldgt~nk~~ 127 (457)
T PLN00191 105 DPTDQTQIDNFMLELDGTPNKGK 127 (457)
T ss_pred ChhhHHHHHHHHHHccCCCCccc
Confidence 8999999885
No 16
>PRK00077 eno enolase; Provisional
Probab=99.91 E-value=1.1e-24 Score=216.78 Aligned_cols=90 Identities=60% Similarity=0.780 Sum_probs=85.6
Q ss_pred ceeeEEEeeeeecCCCCccEEEEEEECCc-eEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh
Q psy5700 221 MPISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 299 (315)
Q Consensus 221 ~~I~~v~ar~ilDSRG~pTVev~v~~~~g-~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~ 299 (315)
|+|++|++|+||||||||||||+|+|++| ++|++||||||||+|||+||||+|+.+|.||||.+||.+||+.|+|+|++
T Consensus 2 ~~I~~v~~r~i~dsrg~ptvev~v~~~~g~~g~a~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~v~~~iap~LiG 81 (425)
T PRK00077 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLGKGVLKAVENVNEEIAPALIG 81 (425)
T ss_pred CeEEEEEEEEEEcCCCCeEEEEEEEECCCCEEEEEEeccCCCCcceeeecCCCCccccCCcCHHHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999 58999999999999999999999988999999999999999999999988
Q ss_pred --------------hcCCCCCCCCC
Q psy5700 300 --------------EVGTSNNFSSN 310 (315)
Q Consensus 300 --------------~~dgt~~~s~~ 310 (315)
++|||.|||+.
T Consensus 82 ~d~~d~~~id~~l~~ldgt~~~~~~ 106 (425)
T PRK00077 82 LDALDQRAIDKAMIELDGTPNKSKL 106 (425)
T ss_pred CChhhHHHHHHHHHHhhCccccCcc
Confidence 67999999864
No 17
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=99.91 E-value=1.2e-24 Score=216.47 Aligned_cols=87 Identities=62% Similarity=0.807 Sum_probs=82.3
Q ss_pred eeEEEeeeeecCCCCccEEEEEEECCc-eEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh--
Q psy5700 223 ISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK-- 299 (315)
Q Consensus 223 I~~v~ar~ilDSRG~pTVev~v~~~~g-~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~-- 299 (315)
|++|++||||||||||||||+|+|++| ++|++||||||||+|||+||||+|+.+|.||||.+||.+||+.|+|+|++
T Consensus 1 i~~i~~r~i~dsrg~ptvev~v~~~~g~~g~~~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~i~~~iap~LiG~d 80 (425)
T TIGR01060 1 IKDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKGVLKAVENVNDIIAPALIGMD 80 (425)
T ss_pred CcEEEEEEEecCCCCceEEEEEEECCCCEEEEeccCCCCCCcceeeeccCCCccccCCcCHHHHHHHHHHHHHHHHcCCC
Confidence 789999999999999999999999998 47999999999999999999999988999999999999999999999988
Q ss_pred ------------hcCCCCCCCC
Q psy5700 300 ------------EVGTSNNFSS 309 (315)
Q Consensus 300 ------------~~dgt~~~s~ 309 (315)
++|||.|+++
T Consensus 81 ~~d~~~id~~l~~~d~t~~~~~ 102 (425)
T TIGR01060 81 AFDQREIDQIMIELDGTPNKSK 102 (425)
T ss_pred HHHHHHHHHHHHhcCCcCCcch
Confidence 5689998874
No 18
>PTZ00378 hypothetical protein; Provisional
Probab=99.89 E-value=2.5e-23 Score=209.37 Aligned_cols=106 Identities=19% Similarity=0.217 Sum_probs=89.5
Q ss_pred hHHHHHHHHH-----HHHHHHHHHHHhcCCcceeeccCCccceeeEEEeeeeecCCCCccEEEEEEECCceEEeeeecCC
Q psy5700 185 LREAMKIGSE-----VYHHLKKVINTQVRKQVFVRFYSSVRMPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGA 259 (315)
Q Consensus 185 ~~Eai~~~~e-----Vy~~lk~il~~~~g~~~~~~~~~s~r~~I~~v~ar~ilDSRG~pTVev~v~~~~g~~ra~vPSGA 259 (315)
+.||++-++. ++.-|-+++++|= -.+.|++|++||||||||||||||+|+|++|.. |||||
T Consensus 19 l~ea~~~~v~~~~~d~~~~l~~~f~~~~-----------~~~~I~~i~areIlDSrGnPTVev~v~l~~G~~---vPSGA 84 (518)
T PTZ00378 19 LTEAARSCVDAHPARPKEYLAAYFREKC-----------SGDEIRALVHNEVLSPAGETVLRFTLELLNGME---VSSGA 84 (518)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhhc-----------CCCeeeEEEEEEEEcCCCCeeEEEEEEECCCCE---ECCCC
Confidence 4677776655 5555666666652 235599999999999999999999999999964 99999
Q ss_pred CCcceeeEEeccCCccc-c-ccchHHHHHhhhhhchHHHHhh--------------hcCCCCCCCC
Q psy5700 260 STGIYEALELRDNDKAH-Y-HGKGVTKAVGFINNDIAPALLK--------------EVGTSNNFSS 309 (315)
Q Consensus 260 StG~~EA~elrD~~~~~-~-~GkgV~~Av~~vn~~I~paL~~--------------~~dgt~~~s~ 309 (315)
||| ||+||||+|+.+ | .||||++||+ +.|+|+|++ ++|||+|+|+
T Consensus 85 StG--EA~elRDgd~~~~~g~gkgV~~Av~---~~i~p~Lig~~~~dQ~~iD~~Li~lDGT~nks~ 145 (518)
T PTZ00378 85 LLS--PSHGERDGEADATLDPAEYTTEALQ---NSYFPRLLQLGARDQREFDSTLRAALSTSPLAN 145 (518)
T ss_pred ccc--ceeeeecCCcccccCCCccHHHHHH---hhhHHHHcCCChHhHHHHHHHHHHhcCCCcccc
Confidence 999 999999999764 8 8999999999 478999987 8999999986
No 19
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=99.89 E-value=1.4e-23 Score=207.81 Aligned_cols=86 Identities=64% Similarity=0.815 Sum_probs=81.1
Q ss_pred EEEeeeeecCCCCccEEEEEEECCc-eEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh----
Q psy5700 225 KIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK---- 299 (315)
Q Consensus 225 ~v~ar~ilDSRG~pTVev~v~~~~g-~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~---- 299 (315)
+|++||||||||||||||+|+|++| ++|++||||||||+|||+||||+|+.+|.|+||.+||.+||+.|+|+|++
T Consensus 1 ~v~~r~i~dsrg~ptvev~v~~~~g~~g~a~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~i~~~iap~LiG~d~~ 80 (408)
T cd03313 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVKNVNEIIAPALIGMDVT 80 (408)
T ss_pred CeEEEEEecCCCCceEEEEEEECCCCEEEEeecCCCCCCcceeeecCCCCcccccCCcHHHHHHHHHHHHHHHHcCCChh
Confidence 4899999999999999999999987 58999999999999999999999988999999999999999999999998
Q ss_pred ----------hcCCCCCCCCC
Q psy5700 300 ----------EVGTSNNFSSN 310 (315)
Q Consensus 300 ----------~~dgt~~~s~~ 310 (315)
++|||+|+|+-
T Consensus 81 dq~~id~~l~~~dgt~~~~~~ 101 (408)
T cd03313 81 DQRAIDKLLIELDGTPNKSKL 101 (408)
T ss_pred hHHHHHHHHHHhcCCCccccc
Confidence 56999999864
No 20
>PRK08350 hypothetical protein; Provisional
Probab=99.87 E-value=1.8e-22 Score=194.39 Aligned_cols=74 Identities=31% Similarity=0.439 Sum_probs=70.7
Q ss_pred eeeEEEeeeeecCCCCccEEEEEEECCceEEeeeecCCCCcceeeEEeccCCccccccchHHHHHhhhhhchHHHHhh--
Q psy5700 222 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK-- 299 (315)
Q Consensus 222 ~I~~v~ar~ilDSRG~pTVev~v~~~~g~~ra~vPSGAStG~~EA~elrD~~~~~~~GkgV~~Av~~vn~~I~paL~~-- 299 (315)
.|++|+|||||||||||||||+|+|++|++||+||| |+|+.+|+ |||++||+|||+.|+|+|++
T Consensus 3 ~I~~i~aReIlDSRGnPTVEveV~~~~g~gra~vPS-------------D~d~~ry~-~gV~~AV~nVn~~Iap~LiG~d 68 (341)
T PRK08350 3 VIENIIGRVAVLRGGKYSVEVDVITDSGFGRFAAPI-------------DENPSLYI-AEAHRAVSEVDEIIGPELIGFD 68 (341)
T ss_pred eeEEEEEEEEEcCCCCceEEEEEEECCcEEEEEecC-------------CCCccccc-chHHHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999999999999988999999 77877899 99999999999999999988
Q ss_pred ------------hcCCCCCCCC
Q psy5700 300 ------------EVGTSNNFSS 309 (315)
Q Consensus 300 ------------~~dgt~~~s~ 309 (315)
++|||+|+|+
T Consensus 69 ~~dQ~~ID~~mielDGT~nKs~ 90 (341)
T PRK08350 69 ASEQELIDSYLWEIDGTEDFSH 90 (341)
T ss_pred HHHHHHHHHHHHhccCCccccc
Confidence 9999999986
No 21
>PF00113 Enolase_C: Enolase, C-terminal TIM barrel domain; InterPro: IPR020810 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ]. In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3TQP_B 2PU1_A 1OEP_A 2PA6_A 1PDY_A 1PDZ_A 3UJ2_E ....
Probab=99.78 E-value=1.7e-19 Score=172.21 Aligned_cols=73 Identities=53% Similarity=0.864 Sum_probs=60.6
Q ss_pred cccceeeeEeecCccCCCCcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCCcc--------eee
Q psy5700 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRKQV--------FVR 214 (315)
Q Consensus 143 ~~lP~P~~nvinGG~ha~n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~~~--------~~~ 214 (315)
++||+|||||||||+||+|+|+||||||+|.| +.|| +|+|+|++||||+||++|++|||..+ ++|
T Consensus 2 ~~lPvP~~nvinGG~ha~~~l~~QEfmI~P~g-----a~s~--~eal~~~~eVy~~Lk~il~~k~G~~~t~vgDeGGfaP 74 (295)
T PF00113_consen 2 YTLPVPMFNVINGGKHAGNKLDFQEFMIVPVG-----ADSF--SEALRMGAEVYHALKKILKKKGGKFATNVGDEGGFAP 74 (295)
T ss_dssp EEE-EEEEEEEE-GGGSSSSCSSSEEEEEETT------SSH--HHHHHHHHHHHHHHHHHHHHHH-GGGGSBETTSSB--
T ss_pred cccCcceEEEEcCccCCCCcccceEEEEEecc-----CCCH--HHHHHhhhHHHHHHHHHHhhcccccccccCcccccCC
Confidence 68999999999999999999999999999999 9999 99999999999999999999987632 237
Q ss_pred ccCCccce
Q psy5700 215 FYSSVRMP 222 (315)
Q Consensus 215 ~~~s~r~~ 222 (315)
++++++..
T Consensus 75 ~~~~~eea 82 (295)
T PF00113_consen 75 NIDDNEEA 82 (295)
T ss_dssp SBSSHHHH
T ss_pred CCcchhHH
Confidence 77776533
No 22
>cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=97.87 E-value=0.00011 Score=71.36 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=71.6
Q ss_pred CeeEEEEeEEeCCCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 2 PISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 2 ~I~~v~ar~IlDsrG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
+|++|...- .++=|+|+|++|+ |.+ |+. . + ..++..+++.|+|.|+
T Consensus 1 kI~~i~~~~-------~~v~V~i~td~Gi~G~G-----------E~~----~------~---~~~~~~i~~~l~p~li-- 47 (341)
T cd03327 1 KIKSVRTRV-------GWLFVEIETDDGTVGYA-----------NTT----G------G---PVACWIVDQHLARFLI-- 47 (341)
T ss_pred CeEEEEEEE-------EEEEEEEEECCCCeEEe-----------cCC----C------c---hHHHHHHHHHHHHHhC--
Confidence 578888753 2577999999885 432 210 0 0 1224567778999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
|.||.+.+.+.+.|.........+.....++.|+.+|+.-+.++..|+|+|++|+
T Consensus 48 G~dp~~~~~~~~~l~~~~~~~~~~~~~~~a~said~AlwDl~gK~~g~Pv~~LLG 102 (341)
T cd03327 48 GKDPSDIEKLWDQMYRATLAYGRKGIAMAAISAVDLALWDLLGKIRGEPVYKLLG 102 (341)
T ss_pred CCCchHHHHHHHHHHhhccccCCccHHHhHHHHHHHHHHHhcccccCCCHHHHcC
Confidence 7899999999888855432111122334689999999999999999999999995
No 23
>PRK15072 bifunctional D-altronate/D-mannonate dehydratase; Provisional
Probab=97.62 E-value=0.00054 Score=68.24 Aligned_cols=122 Identities=20% Similarity=0.297 Sum_probs=80.8
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHh
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~ 79 (315)
|+|++|....+ ..+++.+=|+|+|++|. |.+-++. .+.+ ......+.+.++|.|+
T Consensus 1 mkI~~v~~~~~--~~~~~~vlVri~td~G~~G~GE~~~--------------------~~~~-~~~~~~~~~~l~p~l~- 56 (404)
T PRK15072 1 MKIVDAEVIVT--CPGRNFVTLKITTDDGVTGLGDATL--------------------NGRE-LAVASYLQDHVCPLLI- 56 (404)
T ss_pred CeeEEEEEEEE--CCCCcEEEEEEEeCCCCeEEEeccc--------------------CCch-HHHHHHHHHHHHHHcC-
Confidence 89999999765 34467788999999985 5432211 0001 1223456778999998
Q ss_pred CCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeeeEee
Q psy5700 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (315)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~nvi 153 (315)
|.++.+-+.+.+.|.+.. .-........++.|+.+|+.=+.|+..|+|||+.|+ |.. +-++|+.+.+
T Consensus 57 -G~d~~~~e~~~~~l~~~~-~~~~~~~~~~a~aaID~AlwDl~gK~~g~Pl~~LLG---G~~--r~~v~~y~~~ 123 (404)
T PRK15072 57 -GRDAHRIEDIWQYLYRGA-YWRRGPVTMSAIAAVDMALWDIKAKAAGMPLYQLLG---GAS--REGVMVYGHA 123 (404)
T ss_pred -CCChhHHHHHHHHHHHhc-ccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCc--cCceEEEEeC
Confidence 789998888877774421 000011123478999999999999999999999995 432 3445555543
No 24
>TIGR01502 B_methylAsp_ase methylaspartate ammonia-lyase. This model describes methylaspartate ammonia-lyase, also called beta-methylaspartase (EC 4.3.1.2). It follows methylaspartate mutase (composed of S and E subunits) in one of several possible pathways of glutamate fermentation.
Probab=97.47 E-value=0.0013 Score=66.08 Aligned_cols=87 Identities=24% Similarity=0.352 Sum_probs=61.2
Q ss_pred chhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhH-HHhHHHHHHhhHHhcCChhHHHHHhhcCC
Q psy5700 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAI-LGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (315)
Q Consensus 62 V~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNai-lavSlAvakAaA~~~~iPLy~yi~~l~g~ 140 (315)
....+..+++.|+|.|+ |.|+++.+++-+.|...-. +.. + ..++ .|+++|+.-+.|+..|+|||+.|+...|.
T Consensus 85 ~~~~~~~i~~~laP~Li--G~d~~~~~~l~~~~~~~~~--~~~-~-~~a~kaavd~AL~D~~ak~~g~pl~~LLG~~~~~ 158 (408)
T TIGR01502 85 AKDFIPVIEKEVAPKLI--GRDITNFKDMAEVFEKMTV--NRN-L-HTAIRYGVSQALLDAAAKTRKTTMAEVIRDEYNP 158 (408)
T ss_pred HHHHHHHHHHHhhHHHc--CCCccCHHHHHHHHHHHhh--cCc-c-hhHHHHHHHHHHHHHHHHHcCCcHHHHhCccccc
Confidence 45556778888999999 7899998877777665421 111 2 2355 89999999999999999999999631111
Q ss_pred CCcccceeeeEeec
Q psy5700 141 SNIILPVPAFNVIN 154 (315)
Q Consensus 141 ~~~~lP~P~~nvin 154 (315)
...+-|+|....++
T Consensus 159 ~~~~~~vp~~~s~g 172 (408)
T TIGR01502 159 GAETNAVPVFAQSG 172 (408)
T ss_pred CCcCCceeEEEEee
Confidence 11245677776653
No 25
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=97.33 E-value=0.003 Score=61.62 Aligned_cols=123 Identities=26% Similarity=0.331 Sum_probs=74.3
Q ss_pred CCeeEEEEeEEe--------CCCC----CceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHh
Q psy5700 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (315)
Q Consensus 1 m~I~~v~ar~Il--------DsrG----~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~ 67 (315)
|+|++|+.+.+= .+.| ..+|-|+|.|++|. |.+-+++ |.+.+...+..
T Consensus 1 ~~I~~v~~~~~~~pl~~~~~~~~~~~~~~~~v~V~v~t~~G~~G~Ge~~~-------------------~~~~~~~~~~~ 61 (355)
T cd03321 1 VLITGLRARAVNVPMQYPVHTSVGTVATAPLVLIDLATDEGVTGHSYLFT-------------------YTPAALKSLKQ 61 (355)
T ss_pred CeeEEEEEEEEEccCCCccccccceeccCcEEEEEEEECCCCeEEEeeec-------------------CCCCcHHHHHH
Confidence 678888887553 1222 25677999998875 5432211 22223333333
Q ss_pred hHHHhHHHHHHhCCCCccchHHHHHHHHhhcC-CCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccc
Q psy5700 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (315)
Q Consensus 68 ~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldg-T~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP 146 (315)
.++ .++|.|+| .+. +...+.+.+...-. ..+. .....++.|+.+|+.-+.++..|+|+|+.|+ |. . -+
T Consensus 62 ~~~-~l~p~LiG--~~~-~~~~~~~~~~~~~~~~~~~-~~~~~a~aaid~AlwDl~gk~~g~Pv~~LlG---g~-~--~~ 130 (355)
T cd03321 62 LLD-DMAALLVG--EPL-APAELERALAKRFRLLGYT-GLVRMAAAGIDMAAWDALAKVHGLPLAKLLG---GN-P--RP 130 (355)
T ss_pred HHH-HHHHHhCC--CCC-ChHHHHHHHHHHHHhhcCC-cHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-C--CC
Confidence 344 58999995 454 44556655544320 0010 1124578999999999999999999999995 43 2 25
Q ss_pred eeeeEee
Q psy5700 147 VPAFNVI 153 (315)
Q Consensus 147 ~P~~nvi 153 (315)
+|+...+
T Consensus 131 v~~y~s~ 137 (355)
T cd03321 131 VQAYDSH 137 (355)
T ss_pred eeEEEeC
Confidence 5666543
No 26
>cd03317 NAAAR N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=97.30 E-value=0.0016 Score=63.19 Aligned_cols=70 Identities=24% Similarity=0.322 Sum_probs=58.1
Q ss_pred cccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 57 YHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 57 ~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
|.+.++..+...+++.+.|.|+ |.++.+..++.+.|..+.+ ...++.|+.+|+.-+.++..|+|+|+.|+
T Consensus 51 ~~~~~~~~~~~~i~~~~~p~l~--g~~~~~~~~~~~~~~~~~~-------~~~a~aaid~AlwDl~gk~~g~Pv~~LLG 120 (354)
T cd03317 51 YTEETNATAWHILKDYLLPLLL--GREFSHPEEVSERLAPIKG-------NNMAKAGLEMAVWDLYAKAQGQSLAQYLG 120 (354)
T ss_pred ccCCCHHHHHHHHHHHHHHHHc--CCCCCCHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHHHcCCCHHHHhC
Confidence 4555566677888888999998 7899999999888866432 23589999999999999999999999995
No 27
>PF02746 MR_MLE_N: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; InterPro: IPR013341 Mandelate racemase 5.1.2.2 from EC (MR) and muconate lactonizing enzyme 5.5.1.1 from EC (MLE) are two bacterial enzymes involved in aromatic acid catabolism. They catalyse mechanistically distinct reactions yet they are related at the level of their primary, quaternary (homooctamer) and tertiary structures [, ]. A number of other proteins also seem to be evolutionary related to these two enzymes. These include, various plasmid-encoded chloromuconate cycloisomerases 5.5.1.7 from EC, Escherichia coli protein rspA [], E. coli bifunctional DGOA protein, E. coli hypothetical proteins ycjG, yfaW and yidU and a hypothetical protein from Streptomyces ambofaciens []. This entry represents the N-terminal region of these proteins.; PDB: 2OX4_F 3T9P_A 2QQ6_A 3CYJ_C 3GY1_A 3S47_B 3RRA_B 3RR1_A 3STP_A 3T8Q_A ....
Probab=97.26 E-value=0.0025 Score=52.38 Aligned_cols=91 Identities=21% Similarity=0.224 Sum_probs=64.5
Q ss_pred CceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHH
Q psy5700 17 NPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (315)
Q Consensus 17 ~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (315)
.+.+-|+|.|++|. |-+-+++.. + ........+.+.+.|.|+ |.++.+.+++.+.|.
T Consensus 26 ~~~v~V~l~t~~G~~G~Ge~~~~~--~------------------~~~~~~~~~~~~l~~~l~--g~~~~~~~~~~~~~~ 83 (117)
T PF02746_consen 26 REFVLVRLETDDGVVGWGEAFPSP--G------------------TAETVASALEDYLAPLLI--GQDPDDIEDIWQELY 83 (117)
T ss_dssp EEEEEEEEEETTSEEEEEEEESSS--S------------------SHHHHHHHHHHTHHHHHT--TSBTTGHHHHHHHHH
T ss_pred eEEEEEEEEECCCCEEEEEeeCCc--c------------------hhHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHH
Confidence 35678899998885 554443311 1 123445667778999998 678888777766664
Q ss_pred hhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 96 ~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
..- ....-++.|+-+|+.=+.|+..|+|||++|+
T Consensus 84 ~~~------~~~~~a~aaid~AlwDl~gK~~g~Pl~~LlG 117 (117)
T PF02746_consen 84 RLI------KGNPAAKAAIDMALWDLLGKIAGQPLYQLLG 117 (117)
T ss_dssp HHT------SSHHHHHHHHHHHHHHHHHHHHTSBHHHHTT
T ss_pred Hhc------cchHHHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 331 1135577899999999999999999999983
No 28
>cd03322 rpsA The starvation sensing protein RpsA from E.coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad.
Probab=97.25 E-value=0.0031 Score=61.77 Aligned_cols=108 Identities=19% Similarity=0.300 Sum_probs=72.1
Q ss_pred CeeEEEEeEEeCCCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 2 PISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 2 ~I~~v~ar~IlDsrG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
+|++|... ++ +-+++.+=|+|+|++|. |.+-++. .|. .......+++.++|.|+
T Consensus 1 kI~~ie~~-~~-~~~~~~vlV~v~td~G~~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~l~-- 55 (361)
T cd03322 1 KITAIEVI-VT-CPGRNFVTLKITTDQGVTGLGDATL---NGR------------------ELAVKAYLREHLKPLLI-- 55 (361)
T ss_pred CeEEEEEE-EE-CCCCCEEEEEEEeCCCCeEEEeccc---CCC------------------HHHHHHHHHHHHHHHcC--
Confidence 58888884 33 33466778999999885 5443311 010 01123456778999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
|.++.+.+.+-+.|....-... ......++.|+.+|+.=+.|+..|+|||+.|+
T Consensus 56 G~d~~~~~~~~~~~~~~~~~~~-~~~~~~a~aaid~AlwDl~gk~~g~Pl~~LLG 109 (361)
T cd03322 56 GRDANRIEDIWQYLYRGAYWRR-GPVTMNAIAAVDMALWDIKGKAAGMPLYQLLG 109 (361)
T ss_pred CCChhHHHHHHHHHHHhcccCC-chHHHHHHHHHHHHHHHHhHhhcCCcHHHHcC
Confidence 7899988888777744210000 00112378999999999999999999999995
No 29
>cd03314 MAL Methylaspartate ammonia lyase (3-methylaspartase, MAL) is a homodimeric enzyme, catalyzing the magnesium-dependent reversible alpha,beta-elimination of ammonia from L-threo-(2S,3S)-3-methylaspartic acid to mesaconic acid. This reaction is part of the main catabolic pathway for glutamate. MAL belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=96.94 E-value=0.0092 Score=59.31 Aligned_cols=82 Identities=24% Similarity=0.247 Sum_probs=57.5
Q ss_pred hHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCC---C
Q psy5700 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN---S 141 (315)
Q Consensus 65 Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~---~ 141 (315)
+...+++.|+|.|+ |.||.|-+.+.+.|....-..+ .....+..|+.+|+.=+.++..|+|||+.|+ |. .
T Consensus 51 ~~~~i~~~lap~Li--G~d~~~i~~i~~~m~~~~~~g~--~~~~aaksAIDiALwDl~gK~~g~Pv~~LLG---g~~~~g 123 (369)
T cd03314 51 FIPVIEKVIAPALV--GRDVANFRPAAAVLDKMRLDGN--RLHTAIRYGVSQALLDAVALAQRRTMAEVLC---DEYGLP 123 (369)
T ss_pred HHHHHHHhhhhHhc--CCCHHHHHHHHHHHHHHhhcCC--cchhhHHHHHHHHHHHHHHHHhCCcHHHHcC---CcccCC
Confidence 35577888999999 7899998888777744211011 0111245899999999999999999999995 22 2
Q ss_pred CcccceeeeEee
Q psy5700 142 NIILPVPAFNVI 153 (315)
Q Consensus 142 ~~~lP~P~~nvi 153 (315)
..+.|+|....+
T Consensus 124 ~~r~~v~~y~~~ 135 (369)
T cd03314 124 LADEPVPIFAQS 135 (369)
T ss_pred CcccceEEEEEe
Confidence 235777777554
No 30
>PRK14017 galactonate dehydratase; Provisional
Probab=96.94 E-value=0.0084 Score=59.15 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=68.8
Q ss_pred CCeeEEEEeEEeCCCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHh
Q psy5700 1 MPISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (315)
Q Consensus 1 m~I~~v~ar~IlDsrG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~ 79 (315)
|+|++|..+.+ +. .++=|+|+|++|. |.+-++.+ +. .......++ .++|.|+
T Consensus 1 mkI~~i~~~~~-~~---~~vlV~v~t~dG~~G~GE~~~~---~~------------------~~~~~~~~~-~~~p~l~- 53 (382)
T PRK14017 1 MKITKLETFRV-PP---RWLFLKIETDEGIVGWGEPVVE---GR------------------ARTVEAAVH-ELADYLI- 53 (382)
T ss_pred CeEEEEEEEEE-CC---CEEEEEEEECCCCeEEeccccC---Cc------------------hHHHHHHHH-HHHHHhC-
Confidence 89999999876 32 2466999999885 43332210 10 011122334 5899998
Q ss_pred CCCCccchHHHHHHHHhhcCCCCCC-CCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 80 ESFEVTQQKEIDEFMIKLDGTENKS-KFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~ldgT~nks-~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
|.++.|.+.+-+.|... +-... .....++.|+.+|+.-+.|+..|+|||+.|+
T Consensus 54 -G~d~~~~~~~~~~l~~~--~~~~~~~~~~~A~aaid~AlwDl~gK~~g~Pv~~LLG 107 (382)
T PRK14017 54 -GKDPRRIEDHWQVMYRG--GFYRGGPILMSAIAGIDQALWDIKGKALGVPVHELLG 107 (382)
T ss_pred -CCCHHHHHHHHHHHHHh--cccCCchHHhhHHHHHHHHHHHHhhhhcCCcHHHHcC
Confidence 78888877776666331 10000 1113378999999999999999999999995
No 31
>PRK15440 L-rhamnonate dehydratase; Provisional
Probab=96.90 E-value=0.0049 Score=61.56 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=50.8
Q ss_pred hhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCC--CCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 67 ~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~--lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
..+++.++|.|+ |.|+.|.+.+-+.|...- ....+ +..+|+.|+-+|+.=..++..|+|+|+.|+
T Consensus 83 ~~v~~~l~p~Li--G~dp~~~e~l~~~m~~~~--~~~g~~g~~~~A~saIDiALwDl~gK~~g~Pv~~LLG 149 (394)
T PRK15440 83 FIVEKHLNRFIE--GKCVSDIELIWDQMLNAT--LYYGRKGLVMNTISCVDLALWDLLGKVRGLPVYKLLG 149 (394)
T ss_pred HHHHHHHHHHcC--CCChhhHHHHHHHHHhhc--cccCCccHhhhHHHHHHHHHHHHhhhHcCCcHHHHcC
Confidence 457778999999 789999888877775431 11112 224799999999999999999999999995
No 32
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=96.67 E-value=0.021 Score=55.73 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=67.9
Q ss_pred CeeEEEEeEEeCCCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhC
Q psy5700 2 PISKIHARQIFDSRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (315)
Q Consensus 2 ~I~~v~ar~IlDsrG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~ 80 (315)
+|.+|..+.+ + .+.+=|+|+|++|. |.+-++. .+. .......+++ ++|.|+
T Consensus 1 ~I~~i~~~~~-~---~~~~~V~i~~~~G~~G~GE~~~---~~~------------------~~~~~~~~~~-l~p~l~-- 52 (352)
T cd03325 1 KITKIETFVV-P---PRWLFVKIETDEGVVGWGEPTV---EGK------------------ARTVEAAVQE-LEDYLI-- 52 (352)
T ss_pred CeEEEEEEEE-C---CCEEEEEEEECCCCEEEecccc---CCc------------------chHHHHHHHH-HHHHhC--
Confidence 4788888765 3 35688999999885 5432211 000 0112234555 999998
Q ss_pred CCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 81 g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
|.++.|.+.+=+.|.... ..........++.|+-+|+.-+.++..|+|+|+.|+
T Consensus 53 G~d~~~~~~~~~~~~~~~-~~~~~~~~~~a~aaid~Al~Dl~gk~~g~pv~~LLG 106 (352)
T cd03325 53 GKDPMNIEHHWQVMYRGG-FYRGGPVLMSAISGIDQALWDIKGKVLGVPVHQLLG 106 (352)
T ss_pred CCCHHHHHHHHHHHHHhc-CcCCcchhhhHHHHHHHHHHHHhhhhcCCcHHHHcC
Confidence 788888776655553210 001101113478899999999999999999999995
No 33
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=96.60 E-value=0.019 Score=55.58 Aligned_cols=123 Identities=20% Similarity=0.188 Sum_probs=75.9
Q ss_pred CeeEEEEeEEeC--------CCCCceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHh
Q psy5700 2 PISKIHARQIFD--------SRGNPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (315)
Q Consensus 2 ~I~~v~ar~IlD--------srG~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~ 72 (315)
+|++|....+=- -...+++=|+|.|++|. |.+-++...+ .......+++.
T Consensus 1 kI~~i~~~~~~~p~~~~~~~~~~~~~~~V~v~~~~G~~G~GE~~~~~~---------------------~~~~~~~l~~~ 59 (357)
T cd03316 1 KITDVETFVLRVPLPEPGGAVTWRNLVLVRVTTDDGITGWGEAYPGGR---------------------PSAVAAAIEDL 59 (357)
T ss_pred CeeEEEEEEEecCCcccccccccceEEEEEEEeCCCCEEEEeccCCCC---------------------chHHHHHHHHH
Confidence 366666665421 12346678888888874 4443322110 11234556777
Q ss_pred HHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCC--chhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeee
Q psy5700 73 IAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAF 150 (315)
Q Consensus 73 i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lG--aNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~ 150 (315)
++|.|+ |.++.+.+++.+.|....- ....-| ..+..|+.+|+.-+.++..|+|+|+.|+ |... -.+|+.
T Consensus 60 ~~p~l~--G~~~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~aid~Al~Dl~gk~~g~pl~~llG---g~~~--~~v~~~ 130 (357)
T cd03316 60 LAPLLI--GRDPLDIERLWEKLYRRLF--WRGRGGVAMAAISAVDIALWDIKGKAAGVPVYKLLG---GKVR--DRVRVY 130 (357)
T ss_pred HHHHcc--CCChHHHHHHHHHHHHhcc--cCCCcHHHHHHHHHHHHHHHHhcccccCCcHhhccC---CccC--CceeeE
Confidence 899998 7898888777666654311 000011 3578899999999999999999999995 4322 344555
Q ss_pred Eeec
Q psy5700 151 NVIN 154 (315)
Q Consensus 151 nvin 154 (315)
..+.
T Consensus 131 ~~~~ 134 (357)
T cd03316 131 ASGG 134 (357)
T ss_pred EecC
Confidence 5443
No 34
>TIGR02534 mucon_cyclo muconate and chloromuconate cycloisomerases. This model encompasses muconate cycloisomerase (EC 5.5.1.1) and chloromuconate cycloisomerase (EC 5.5.1.7), enzymes that often overlap in specificity. It excludes more distantly related proteins such as mandelate racemase (5.1.2.2).
Probab=96.47 E-value=0.023 Score=55.71 Aligned_cols=97 Identities=23% Similarity=0.195 Sum_probs=64.4
Q ss_pred CceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHH
Q psy5700 17 NPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (315)
Q Consensus 17 ~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (315)
.+++=|+|+|++|. |.+-+.. +. .+.|.|.+.......+++.++|.|+ |.++.+...+-+.|.
T Consensus 27 ~~~~~V~v~t~~G~~G~Ge~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~l~--G~~~~~~~~~~~~~~ 90 (368)
T TIGR02534 27 QTLVLVRIRTEDGVIGYGEGTT-----------IG---GLWWGGESPETIKANIDTYLAPVLV--GRDATEIAAIMADLE 90 (368)
T ss_pred ccEEEEEEEECCCCeEEEecCC-----------CC---CCccCCCCHHHHHHHHHHhhHHHHc--CCChhhHHHHHHHHH
Confidence 46677899998774 4433311 00 0134555555556677778999998 678776544433333
Q ss_pred hhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 96 ~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
..- .-+..++.|+.+|+.-+.++..|+|+|+.|+
T Consensus 91 ~~~------~~~~~a~said~AlwDl~gK~~g~Pv~~LLG 124 (368)
T TIGR02534 91 KVV------AGNRFAKAAVDTALHDAQARRLGVPVSELLG 124 (368)
T ss_pred HHh------cCCchHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 321 0122379999999999999999999999995
No 35
>cd03329 MR_like_4 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 4. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=96.30 E-value=0.051 Score=53.31 Aligned_cols=63 Identities=11% Similarity=0.174 Sum_probs=50.5
Q ss_pred HhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 66 v~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
...+.+.++|.|+ |.|+.|-+++-+.|...-. .....++.|+.+|+.=..++..|+|||+.|+
T Consensus 58 ~~~~~~~l~p~li--G~d~~~~~~~~~~~~~~~~-----~~~~~A~said~AlwDl~gk~~g~Pl~~LLG 120 (368)
T cd03329 58 PALVDRFLKKVLI--GQDPLDRERLWQDLWRLQR-----GLTDRGLGLVDIALWDLAGKYLGLPVHRLLG 120 (368)
T ss_pred HHHHHHHHHHhcC--CCChhHHHHHHHHHHHHhc-----CcchhHHHHHHHHHHHHhhhhcCCcHHHHhh
Confidence 4456778999999 7899998888777755321 1334589999999999999999999999996
No 36
>TIGR01928 menC_lowGC/arch o-succinylbenzoic acid (OSB) synthetase. This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are low GC gram positive bacteria and archaea. Also included in the seed and in the model are enzymes with the com-name of N-acylamino acid racemase (or the more general term, racemase / racemase family), which refers to the enzyme's industrial application as racemases, and not to its biological function as o-succinylbenzoic acid synthetase.
Probab=96.10 E-value=0.044 Score=52.95 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=64.1
Q ss_pred CceEEEEEEECCce-EEEEeecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHH
Q psy5700 17 NPTVEVDLTTELGL-FRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (315)
Q Consensus 17 ~pTvEveV~~~~g~-~~a~~PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (315)
...+=|+|+|++|. |.+=++. ..- +.|.+..+..+.+.+++.+.|.|+ | ++.+-.++-+.|.
T Consensus 21 ~~~~lV~v~~~~G~~G~GE~~~-----------~~~---~~~~~~~~~~~~~~i~~~~~~~l~--g-~~~~~~~~~~~~~ 83 (324)
T TIGR01928 21 RDCLIIELIDDKGNAGFGEVVA-----------FQT---PWYTHETIATVKHIIEDFFEPNIN--K-EFEHPSEALELVR 83 (324)
T ss_pred CcEEEEEEEECCCCeEEEeccc-----------cCC---CCcCcccHHHHHHHHHHHHHHHhc--C-CCCCHHHHHHHHH
Confidence 35677999998774 4332211 000 013334455556778888899998 6 7777766666554
Q ss_pred hhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 96 ~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
.+. .+..++.|+-+|+.-+.++..|+|||+.|+
T Consensus 84 ~~~-------~~~~a~said~AlwDl~gk~~g~Pl~~llG 116 (324)
T TIGR01928 84 SLK-------GTPMAKAGLEMALWDMYHKLPSFSLAYGQG 116 (324)
T ss_pred Hcc-------CCcHHHHHHHHHHHHHHHhhhCCcHHHHhC
Confidence 321 233489999999999999999999999995
No 37
>COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
Probab=96.09 E-value=0.046 Score=53.61 Aligned_cols=75 Identities=24% Similarity=0.287 Sum_probs=50.9
Q ss_pred hHHHHHHhCCCCccchHHHHHHHHhh-cCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcCCCCcccceeee
Q psy5700 72 DIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAF 150 (315)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~l-dgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g~~~~~lP~P~~ 150 (315)
.+++.|+ |.++.+...+.+.|..- ... .....-.++.||-+|+.-..|+..|+|||+.|+ |... -.++..
T Consensus 64 ~~~~~l~--g~d~~~i~~~~~~~~~~~~~~--~~~~~~~a~sAvd~ALwDl~gK~~g~Pv~~LLG---g~~r--~~v~~y 134 (372)
T COG4948 64 LLAPLLI--GRDPFDIERIWQKLYRAGFAR--RGGITMAAISAVDIALWDLAGKALGVPVYKLLG---GKVR--DEVRAY 134 (372)
T ss_pred HHHHHhc--CCCHHHHHHHHHHHHHhcccc--cchHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---Ccee--eeEEEE
Confidence 5789998 78888877755544332 211 112223699999999999999999999999995 4322 344555
Q ss_pred EeecC
Q psy5700 151 NVING 155 (315)
Q Consensus 151 nvinG 155 (315)
+...+
T Consensus 135 ~~~~~ 139 (372)
T COG4948 135 ASGGG 139 (372)
T ss_pred EecCC
Confidence 55544
No 38
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=96.07 E-value=0.054 Score=53.03 Aligned_cols=66 Identities=21% Similarity=0.231 Sum_probs=49.6
Q ss_pred hhHHHhHHHHHHhCCCCccchHHHHHHHHhh-cCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 67 ~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~l-dgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
..+++.++|.|+ |.|+.+.+.+-+.|... .+... +.....++.|+.+|+.=..++..|+|+|+.|+
T Consensus 54 ~~i~~~~~p~li--G~d~~~~~~l~~~~~~~~~~~~~-~g~~~~a~aaiD~AlwDl~gK~~g~Pv~~LLG 120 (352)
T cd03328 54 ALVDGLLAPVVE--GRDALDPPAAWEAMQRAVRNAGR-PGVAAMAISAVDIALWDLKARLLGLPLARLLG 120 (352)
T ss_pred HHHHHHHHHHhc--CCCcccHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHHHHHhhhhcCCcHHHHhc
Confidence 356778999998 78999988887777542 11110 01112588999999999999999999999995
No 39
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=95.97 E-value=0.056 Score=52.78 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=51.8
Q ss_pred ccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhh-cCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 58 HGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 58 ~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~l-dgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
.|......+..+++.++|.|+ |.++.+-+++-+.|... .+ +..++.|+.+|+.-+.++..|+|+|+.|+
T Consensus 56 ~~~~~~~~~~~l~~~~~~~l~--G~~~~~~~~~~~~l~~~~~~-------~~~a~said~AlwDl~gK~~g~Pl~~LLG 125 (365)
T cd03318 56 GGESPETIKAIIDRYLAPLLI--GRDATNIGAAMALLDRAVAG-------NLFAKAAIEMALLDAQGRRLGLPVSELLG 125 (365)
T ss_pred CCCCHHHHHHHHHHhhHHHHc--CCChHHHHHHHHHHHHHhcC-------CccHHHHHHHHHHHHHHhHcCCCHHHHcC
Confidence 344445556778888999998 78888876665444332 11 23488999999999999999999999995
No 40
>cd03324 rTSbeta_L-fuconate_dehydratase Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=94.33 E-value=0.65 Score=46.84 Aligned_cols=65 Identities=18% Similarity=0.079 Sum_probs=43.4
Q ss_pred HHHhHHHHHHhCCCCccchH----HHHHHHHhhcCCCCCC-CCC--chhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 69 INNDIAPALLKESFEVTQQK----EIDEFMIKLDGTENKS-KFG--ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 69 vn~~i~p~Li~~g~~~~dQ~----~ID~~L~~ldgT~nks-~lG--aNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
+.+.++|.|+ |.|+.+.. .+++.|..-..+-... .-| ..++.|+-+|+.-..++..|+|+|+.|+
T Consensus 64 ~~~~lap~li--G~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~saiD~AlwDl~gK~~g~Pv~~LLG 135 (415)
T cd03324 64 AIEALAHLVV--GRDLESIVADMGKFWRRLTSDSQLRWIGPEKGVIHLATAAVVNAVWDLWAKAEGKPLWKLLV 135 (415)
T ss_pred HHHHHHHHhC--CCCHHHHHHHHHHHHHHhhccccceecCCcccHHHHHHHHHHHHHHHHhhhhcCCcHHHHhc
Confidence 3356999999 78998863 3444332100000000 112 2589999999999999999999999996
No 41
>cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate. GlucD belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=93.67 E-value=0.89 Score=45.41 Aligned_cols=66 Identities=14% Similarity=0.196 Sum_probs=42.5
Q ss_pred HhhHHHhHHHHHHhCCCCcc-c-hHHHHHHHHhhcCCCCCCCCC---------chhHHHhHHHHHHhhHHhcCChhHHHH
Q psy5700 66 VGFINNDIAPALLKESFEVT-Q-QKEIDEFMIKLDGTENKSKFG---------ANAILGVSLAVAKAGAAKKGVPLYKHL 134 (315)
Q Consensus 66 v~~vn~~i~p~Li~~g~~~~-d-Q~~ID~~L~~ldgT~nks~lG---------aNailavSlAvakAaA~~~~iPLy~yi 134 (315)
+..+. .++|.|+ |.++. + ....+++...+-.. ..+.-| ..++.|+-+|+.-..++..|+|||+.|
T Consensus 54 ~~~~~-~~~~~ll--g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LL 129 (395)
T cd03323 54 LEALL-EAARSLV--GGDVFGAYLAVLESVRVAFADR-DAGGRGLQTFDLRTTVHVVTAFEVALLDLLGQALGVPVADLL 129 (395)
T ss_pred HHHHH-HHhHHHh--CCCcchhhHHHHHHHHHHHhcc-cccccCccccchhHHHHHHHHHHHHHHHHhhhhcCCCHHHHh
Confidence 33443 4688888 56662 3 34455544333111 111112 457899999999999999999999999
Q ss_pred H
Q psy5700 135 A 135 (315)
Q Consensus 135 ~ 135 (315)
+
T Consensus 130 G 130 (395)
T cd03323 130 G 130 (395)
T ss_pred C
Confidence 5
No 42
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=93.52 E-value=0.85 Score=43.59 Aligned_cols=64 Identities=22% Similarity=0.268 Sum_probs=44.5
Q ss_pred chhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 62 V~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
...+...++. +.|.|+ |.++. ...+-+.|...- .-+..++.|+.+|+.-+.++..|+|+|+.|.
T Consensus 54 ~~~~~~~~~~-~~~~l~--G~~~~-~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~gk~~g~pv~~ll~ 117 (316)
T cd03319 54 VESVLAALKS-VRPALI--GGDPR-LEKLLEALQELL------PGNGAARAAVDIALWDLEAKLLGLPLYQLWG 117 (316)
T ss_pred HHHHHHHHHH-HHHHhc--CCCch-HHHHHHHHHHhc------cCChHHHHHHHHHHHHHHHHHcCCcHHHHcC
Confidence 3444555665 489998 67776 555544443321 1134588999999999999999999999863
No 43
>TIGR03247 glucar-dehydr glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (, GenProp0716). The E. coli enzyme has been well-characterized.
Probab=93.46 E-value=0.56 Score=47.73 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=44.8
Q ss_pred hHHHHHHhCCCCccchHHHHHHHHhhc------CCCCC---CCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 72 DIAPALLKESFEVTQQKEIDEFMIKLD------GTENK---SKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~ld------gT~nk---s~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
.++|.|+ |.|+.+.+.+-+.|.... +..+- -+....|+.|+-+|+.=..++..|+|||+.|+
T Consensus 63 ~lap~Li--G~dp~~~e~i~~~m~~~~~~~~~~~~g~~~~~~~~~~~A~aAIDiALWDl~gK~~g~Pl~~LLG 133 (441)
T TIGR03247 63 DARPLVV--GKPLGEYQNVLNDVRATFADRDAGGRGLQTFDLRTTIHAVTAIESALLDLLGQHLGVPVAALLG 133 (441)
T ss_pred HHHHHhc--CCCHHHHHHHHHHHHHHhhcccccccCcccccchhHHHHHHHHHHHHHHHhhhHcCCCHHHHhC
Confidence 5899999 789998888766664421 00000 00112488999999999999999999999994
No 44
>cd03326 MR_like_1 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 1. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=93.08 E-value=0.47 Score=47.28 Aligned_cols=63 Identities=27% Similarity=0.357 Sum_probs=45.3
Q ss_pred hHHHhHHHHHHhCCCCccch----------HHHHHHHHhhcCCCCCCCCC--chhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 68 FINNDIAPALLKESFEVTQQ----------KEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 68 ~vn~~i~p~Li~~g~~~~dQ----------~~ID~~L~~ldgT~nks~lG--aNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
.+++.++|.|+ |.||.+. +.+-+.|.. .+ .....| ..++.|+-+|+.=+.++..|+|+|+.|+
T Consensus 60 ~i~~~~~p~Li--G~dp~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG 134 (385)
T cd03326 60 LLRERFIPRLL--AAAPDSLLDDAGGNLDPARAWAAMMR--NE-KPGGHGERAVAVGALDMAVWDAVAKIAGLPLYRLLA 134 (385)
T ss_pred HHHHHHHHHhc--CCChHHhhhcccccCCHHHHHHHHHh--cC-ccCCCCHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC
Confidence 37788999999 7898854 444444422 11 111112 3478899999999999999999999995
No 45
>PF05034 MAAL_N: Methylaspartate ammonia-lyase N-terminus; InterPro: IPR022665 Methylaspartate ammonia-lyase 4.3.1.2 from EC catalyses the second step of fermentation of glutamate. It is a homodimer. This domain represents the N-terminal region of methylaspartate ammonia-lyase. This domain is structurally related to PF03952 from PFAM []. This domain is associated with the catalytic domain PF07476 from PFAM. ; PDB: 1KKO_B 1KKR_A 3ZVI_A 1KD0_B 1KCZ_B 3ZVH_A.
Probab=87.72 E-value=1.7 Score=38.65 Aligned_cols=99 Identities=26% Similarity=0.322 Sum_probs=56.6
Q ss_pred eEEEEEEECCce-E---EEEe-ecCCCCcceeeeEeecCCccccccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHH
Q psy5700 19 TVEVDLTTELGL-F---RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEF 93 (315)
Q Consensus 19 TvEveV~~~~g~-~---~a~~-PsGaS~g~~Ea~el~d~~~~~~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~ 93 (315)
+|-|.+.+++|. . +++| =||+ |-+|-+ |. -..=+..|++.|+|.|+ |+|.+.-++.=+.
T Consensus 52 sisV~l~L~dG~va~GDCaaVQYSGa--gGRDPL---------F~---a~~~ip~ie~~v~p~L~--g~d~~~Fr~~a~~ 115 (159)
T PF05034_consen 52 SISVMLVLEDGQVAYGDCAAVQYSGA--GGRDPL---------FL---AEDFIPVIEKEVAPRLV--GRDLSSFRENAEK 115 (159)
T ss_dssp EEEEEEEETTS-EEEEEE---TTTTS--TTS-S---------------HHHHHHHHHHHTHHHHT--T-B-S-CHHHHHH
T ss_pred EEEEEEEeCCCCEEEeeehheeeccc--CCCCCc---------cc---HHHHHHHHHhhccHHHc--CCcHHHHHHHHHH
Confidence 678899999883 3 3333 2333 333322 22 12336778899999999 5666654333333
Q ss_pred HHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHh
Q psy5700 94 MIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (315)
Q Consensus 94 L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~ 136 (315)
+-++ -+-.++..-.=.+||-|+..|+|+.++.-.-+-|++
T Consensus 116 ~d~~---~~g~rlhtAiRYGvsQALL~A~A~a~~~tmaeVi~~ 155 (159)
T PF05034_consen 116 FDEL---VDGKRLHTAIRYGVSQALLDAAAKAQRTTMAEVIAE 155 (159)
T ss_dssp HHH----ETTEE--HHHHHHHHHHHHHHHHHHCTS-HHHHHHH
T ss_pred HHhc---ccCCcchhHHHHhHHHHHHHHHHHHcCCcHHHHHHH
Confidence 3222 123367776779999999999999998877776654
No 46
>PRK15129 L-Ala-D/L-Glu epimerase; Provisional
Probab=79.18 E-value=10 Score=36.58 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=42.1
Q ss_pred ccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 60 kgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
.+...+...+. .+.|.|+ .+.+ ...+++++ + ..-+..|+.+|+.-..++..++|||+.|+
T Consensus 53 ~~~~~~~~~l~-~~~~~l~-~~~~---~~~~~~~~----~-------~~~a~~aid~AlwDl~gk~~~~pl~~llG 112 (321)
T PRK15129 53 ESDASVMAQIM-SVVPQLE-KGLT---REALQKLL----P-------AGAARNAVDCALWDLAARQQQQSLAQLIG 112 (321)
T ss_pred CCHHHHHHHHH-HHHHHHh-CCCC---HHHHHhhc----c-------ChHHHHHHHHHHHHHHHHHcCCcHHHHcC
Confidence 44556666665 5889996 3332 23344432 1 12388999999999999999999999995
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=72.43 E-value=30 Score=41.04 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=27.0
Q ss_pred CCchhHHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 106 FGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 106 lGaNailavSlAvakAaA~~~~iPLy~yi~ 135 (315)
.-..+..|+.+|+.-+.++..|+|||+.|+
T Consensus 1035 ~~psa~~ald~ALwDl~gk~~g~Pl~~LLG 1064 (1655)
T PLN02980 1035 IFPSVRCGLEMAILNAIAVRHGSSLLNILD 1064 (1655)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 345689999999999999999999999995
No 48
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=56.74 E-value=11 Score=34.35 Aligned_cols=25 Identities=36% Similarity=0.507 Sum_probs=23.5
Q ss_pred HHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 111 ILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 111 ilavSlAvakAaA~~~~iPLy~yi~ 135 (315)
+.|+.+|+.-+.++..|+|+|+.|+
T Consensus 44 ~~aid~Al~Dl~gk~~~~pl~~llg 68 (229)
T cd00308 44 ISGIDMALWDLAAKALGVPLAELLG 68 (229)
T ss_pred HHHHHHHHHHHhHhHcCCcHHHHcC
Confidence 7899999999999999999999995
No 49
>COG3799 Mal Methylaspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=40.62 E-value=39 Score=33.46 Aligned_cols=102 Identities=22% Similarity=0.355 Sum_probs=58.5
Q ss_pred hhHhhHHHhHHHHHHhCCCCcc----chHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHHHHhhcC
Q psy5700 64 KAVGFINNDIAPALLKESFEVT----QQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAG 139 (315)
Q Consensus 64 ~Av~~vn~~i~p~Li~~g~~~~----dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~yi~~l~g 139 (315)
.-...+|..+.|.|+ |.|+. +-+-+|.+ +|+ ..+--..=.+||-|+..|+|...+.---+.+.+.-+
T Consensus 88 ~~~~~~~~~v~p~Lv--grDv~~~ldnA~vfe~l---~d~----~~LhtAvrYGvSQALl~Aaa~a~~tt~tevvcde~~ 158 (410)
T COG3799 88 HFIPFLNDHVKPLLV--GRDVDAFLDNARVFEKL---IDG----NLLHTAVRYGVSQALLDAAALATGTTKTEVVCDEWQ 158 (410)
T ss_pred hhHHHHhhhhhhhhh--CccHHhhcchhHHhHhh---ccC----CcchHHHHhhHHHHHHHHHHHhhccchheeehhhhC
Confidence 335678899999999 55543 12222222 232 134444568999999999999988766666654333
Q ss_pred CCCcccceeeeEeecCccCC-CCcCcceEEEEeecC
Q psy5700 140 NSNIILPVPAFNVINGGSHA-GNKLAMQEFMILPTG 174 (315)
Q Consensus 140 ~~~~~lP~P~~nvinGG~ha-~n~l~iQEfmiiP~g 174 (315)
....+-|+|+|.--+.-..- -.++-++-+=++|+|
T Consensus 159 lp~~te~vP~fgQSGd~R~~~vdkMiLK~vdVLPHg 194 (410)
T COG3799 159 LPRVTESVPLFGQSGDDRYIAVDKMILKGVDVLPHG 194 (410)
T ss_pred CCCccccccccccCcchhhhhHHHHHHhhcCccchh
Confidence 33345667777321111110 113335555667776
No 50
>PRK05105 O-succinylbenzoate synthase; Provisional
Probab=36.62 E-value=84 Score=30.43 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=40.0
Q ss_pred cccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhcCChhHHH
Q psy5700 57 YHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKH 133 (315)
Q Consensus 57 ~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~~iPLy~y 133 (315)
|.|.++..+...+.+.+.|.+. .++.++ . ..-..+..++.+|++...++..+.|+|..
T Consensus 51 ~~~et~~~~~~~l~~~~~~~~~---~~~~~~-------~---------~~~~~a~~~i~~Al~dl~gk~~~~~~~~~ 108 (322)
T PRK05105 51 FSQETLEEAQEALLAWLNNWLA---GDCDDE-------L---------SQYPSVAFGLSCALAELAGTLPQAANYRT 108 (322)
T ss_pred CCccCHHHHHHHHHHHHHHhhc---Cccccc-------c---------ccCcHHHHHHHHHHHHhcCCCCCCCCcce
Confidence 6778888888889888887553 333321 0 11234667888888888888888888753
No 51
>PF08670 MEKHLA: MEKHLA domain; InterPro: IPR013978 The MEKHLA domain shares similarity with the PAS domain and is found in the 3' end of plant HD-ZIP III homeobox genes, and bacterial proteins.
Probab=34.51 E-value=65 Score=28.34 Aligned_cols=90 Identities=20% Similarity=0.182 Sum_probs=61.1
Q ss_pred cceeeeEeecCccCCCCcCcceEEEEeecCCccccccccChHHHHHHHHHHHHHHHHHHHHhcCC-cceeeccCCcc-ce
Q psy5700 145 LPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKVINTQVRK-QVFVRFYSSVR-MP 222 (315)
Q Consensus 145 lP~P~~nvinGG~ha~n~l~iQEfmiiP~g~~~~~a~s~~~~Eai~~~~eVy~~lk~il~~~~g~-~~~~~~~~s~r-~~ 222 (315)
-|-|.||.=|--.-.=-.++.+||.=+|.- .|. ++.-| -|-+..|.++...-|.. ...+...++.| +.
T Consensus 50 ~~dP~f~yaN~aaL~l~e~~w~el~~lPsr------~sa--e~~~r--~er~~lL~~v~~qG~~~~y~GiRiss~Grrf~ 119 (148)
T PF08670_consen 50 KADPIFIYANQAALDLFETTWDELVGLPSR------LSA--EEPER--KERQSLLAQVMQQGYIDNYSGIRISSTGRRFR 119 (148)
T ss_pred CCCCEEEehhHHHHHHhcCCHHHHhcCcHh------hcc--ChhhH--HHHHHHHHHHHHhCCccCCCeEEEcCCCCeEE
Confidence 366777665422111124567899999963 455 54433 46777888888776633 45668888887 78
Q ss_pred eeEEEeeeeecCCCCccEEEEE
Q psy5700 223 ISKIHARQIFDSRGNPTVEVDL 244 (315)
Q Consensus 223 I~~v~ar~ilDSRG~pTVev~v 244 (315)
|++..+++++|..|+..-.+-+
T Consensus 120 ie~a~vW~l~D~~g~~~GqAa~ 141 (148)
T PF08670_consen 120 IERATVWNLIDEDGNYCGQAAM 141 (148)
T ss_pred EeceEEEEEEcCCCCEEEEEEE
Confidence 9999999999999977655443
No 52
>PRK15072 bifunctional D-altronate/D-mannonate dehydratase; Provisional
Probab=33.78 E-value=89 Score=31.23 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=22.2
Q ss_pred ceeeEEEeeeeecCCCCccEEEEEEECCce
Q psy5700 221 MPISKIHARQIFDSRGNPTVEVDLTTELGL 250 (315)
Q Consensus 221 ~~I~~v~ar~ilDSRG~pTVev~v~~~~g~ 250 (315)
|+|++|+.... ..+++.|=|+|+|++|.
T Consensus 1 mkI~~v~~~~~--~~~~~~vlVri~td~G~ 28 (404)
T PRK15072 1 MKIVDAEVIVT--CPGRNFVTLKITTDDGV 28 (404)
T ss_pred CeeEEEEEEEE--CCCCcEEEEEEEeCCCC
Confidence 78999999765 34467788999999985
No 53
>PF06545 DUF1116: Protein of unknown function (DUF1116); InterPro: IPR009499 This family contains hypothetical bacterial proteins of unknown function.; PDB: 3CLQ_A.
Probab=30.02 E-value=1.1e+02 Score=28.62 Aligned_cols=62 Identities=27% Similarity=0.531 Sum_probs=35.5
Q ss_pred cccccchhhHhhHHHhHHHHHHhCCCCccchHHHHHHHHhhcCCCCCCCCCchhHHHhHHHHHHhhHHhc-CCh
Q psy5700 57 YHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKK-GVP 129 (315)
Q Consensus 57 ~~GkgV~~Av~~vn~~i~p~Li~~g~~~~dQ~~ID~~L~~ldgT~nks~lGaNailavSlAvakAaA~~~-~iP 129 (315)
++.+.. .|-..+-..|+|.|...+.+..+.+++.+.|. +++ .-.|-++||.||+..... ++|
T Consensus 99 ~H~Rn~-Aat~ll~~~L~P~l~~~~~~~~~~~~v~~fl~---~nd-------~FFLnl~MAa~K~~~daa~~i~ 161 (216)
T PF06545_consen 99 CHNRNI-AATSLLLRELAPALVDTDFPKDDKAEVLEFLA---SND-------HFFLNLSMAACKAMMDAARGIP 161 (216)
T ss_dssp SSS--H-HHHHHHHHHHHHHHHTSSS-HHHHHHHHHHHT---S-T-------TTTHHHHHHHHHHHHHHTSS-T
T ss_pred hhhHhH-HHHHHHHHHHHHHHhccCCChHHHHHHHHHHh---cCC-------ceeehHHHHHHHHHHHHhcCCC
Confidence 444443 33344555689999854555555555555554 332 256889999999876654 455
No 54
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=27.45 E-value=1.4e+02 Score=29.82 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=53.2
Q ss_pred CCchhHHHhHHHHHHhhHHhcCChhHHH--HHh--hcCCCCcccceeeeEeecCccCCCCcCcceEEEEeecCCcccccc
Q psy5700 106 FGANAILGVSLAVAKAGAAKKGVPLYKH--LAD--LAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVAS 181 (315)
Q Consensus 106 lGaNailavSlAvakAaA~~~~iPLy~y--i~~--l~g~~~~~lP~P~~nvinGG~ha~n~l~iQEfmiiP~g~~~~~a~ 181 (315)
.|.=.-|-|.+++||+-|...++|++-. +.. +.+.....++.|+.=+++|| |. +++..-.++...++.
T Consensus 80 PGl~~~LrVG~~~Ak~LA~a~~~PligV~HlegHi~a~~l~~~~~~Pl~LlVSGG-hT-------~l~~~~~~~~~ilG~ 151 (345)
T PTZ00340 80 PGMGAPLSVGAVVARTLSLLWGKPLVGVNHCVAHIEMGRLVTGAENPVVLYVSGG-NT-------QVIAYSEHRYRIFGE 151 (345)
T ss_pred CCcHhhHHHHHHHHHHHHHHcCCCEeecchHHHHHHHHhhccCCCCCeEEEEeCC-ce-------EEEEecCCeEEEEEe
Confidence 3444668889999999999999998742 210 01111112345588889988 43 122211122222267
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHh
Q psy5700 182 SFLLREAMKIGSEVYHHLKKVINTQ 206 (315)
Q Consensus 182 s~~~~Eai~~~~eVy~~lk~il~~~ 206 (315)
|. .+| +-|.|.+..+.|---
T Consensus 152 T~--Dda---~Gea~DKvar~LGL~ 171 (345)
T PTZ00340 152 TI--DIA---VGNCLDRFARLLNLS 171 (345)
T ss_pred ec--ccc---hhHHHHHHHHHhCCC
Confidence 77 766 569999999988543
No 55
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=20.87 E-value=1e+02 Score=28.49 Aligned_cols=25 Identities=28% Similarity=0.377 Sum_probs=22.5
Q ss_pred HHHhHHHHHHhhHHhcCChhHHHHH
Q psy5700 111 ILGVSLAVAKAGAAKKGVPLYKHLA 135 (315)
Q Consensus 111 ilavSlAvakAaA~~~~iPLy~yi~ 135 (315)
..|+.+|+.-+.++..|+|+|+.++
T Consensus 45 ~~aid~Al~Dl~gk~~g~pv~~llG 69 (265)
T cd03315 45 KAAVDMALWDLWGKRLGVPVYLLLG 69 (265)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHcC
Confidence 6799999999999999999988774
No 56
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=20.05 E-value=1e+02 Score=24.34 Aligned_cols=46 Identities=13% Similarity=0.189 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceeeccCCccceeeEEEeeeeecCC
Q psy5700 190 KIGSEVYHHLKKVINTQVRKQVFVRFYSSVRMPISKIHARQIFDSR 235 (315)
Q Consensus 190 ~~~~eVy~~lk~il~~~~g~~~~~~~~~s~r~~I~~v~ar~ilDSR 235 (315)
.-..++-++|.+.|+.+.|..+.+..+.-+..+-..-+++.|+|.|
T Consensus 51 ~~~~~l~~~i~~~lk~~lgv~~~V~lv~~gtLpr~~~K~~RviD~R 96 (96)
T PF14535_consen 51 EDLEALAERIAERLKERLGVRPEVELVPPGTLPRSEGKAKRVIDNR 96 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHSS-EEEEEE-TT-S---SSSS-SEEEES
T ss_pred HHHHHHHHHHHHHHHhhcCceEEEEEECCCCccCCCCcceEEEeCc
Confidence 3345677788888999999999887777766665566899999976
Done!