RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy5700
(315 letters)
>gnl|CDD|239429 cd03313, enolase, Enolase: Enolases are homodimeric enzymes that
catalyse the reversible dehydration of
2-phospho-D-glycerate to phosphoenolpyruvate as part of
the glycolytic and gluconeogenesis pathways. The
reaction is facilitated by the presence of metal ions.
Length = 408
Score = 349 bits (898), Expect = e-119
Identities = 128/200 (64%), Positives = 153/200 (76%), Gaps = 13/200 (6%)
Query: 5 KIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63
KI AR+I DSRGNPTVEV++TTE G + RAAVPSGASTG +EA+ELRD DK+ Y GKGV
Sbjct: 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVL 60
Query: 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGA 123
KAV +N IAPAL+ +VT Q+ ID+ +I+LDGT NKSK GANAILGVSLAVAKA A
Sbjct: 61 KAVKNVNEIIAPALIG--MDVTDQRAIDKLLIELDGTPNKSKLGANAILGVSLAVAKAAA 118
Query: 124 AKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVASSF 183
A G+PLY++L LA +LPVP FNVINGG+HAGNKL QEFMI+P G A SF
Sbjct: 119 AALGLPLYRYLGGLA---AYVLPVPMFNVINGGAHAGNKLDFQEFMIVPVG-----APSF 170
Query: 184 LLREAMKIGSEVYHHLKKVI 203
EA+++G+EVYH LKKV+
Sbjct: 171 --SEALRMGAEVYHTLKKVL 188
Score = 147 bits (373), Expect = 4e-41
Identities = 52/76 (68%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 225 KIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVT 283
KI AR+I DSRGNPTVEV++TTE G + RAAVPSGASTG +EA+ELRD DK+ Y GKGV
Sbjct: 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVL 60
Query: 284 KAVGFINNDIAPALLK 299
KAV +N IAPAL+
Sbjct: 61 KAVKNVNEIIAPALIG 76
>gnl|CDD|215095 PLN00191, PLN00191, enolase.
Length = 457
Score = 347 bits (892), Expect = e-118
Identities = 147/201 (73%), Positives = 163/201 (81%), Gaps = 10/201 (4%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
I+K+ ARQI DSRGNPTVEVDL T G+FRAAVPSGASTGIYEALELRD DK Y GKGV
Sbjct: 28 ITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALELRDGDKD-YLGKGV 86
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
KAV +N IAPAL+ + T Q +ID FM++LDGT NK K GANAIL VSLAV KAG
Sbjct: 87 LKAVKNVNEIIAPALI--GMDPTDQTQIDNFMLELDGTPNKGKLGANAILAVSLAVCKAG 144
Query: 123 AAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVASS 182
AA+KGVPLYKH+ADLAGN ++LPVPAFNVINGGSHAGNKLAMQEFMILP G ASS
Sbjct: 145 AAEKGVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVG-----ASS 199
Query: 183 FLLREAMKIGSEVYHHLKKVI 203
F +EAM++GSEVYHHLK VI
Sbjct: 200 F--KEAMQMGSEVYHHLKAVI 218
Score = 135 bits (341), Expect = 3e-36
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
Query: 211 VFVRFYSSVRMP--ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALE 268
+F+ + + I+K+ ARQI DSRGNPTVEVDL T G+FRAAVPSGASTGIYEALE
Sbjct: 14 LFIANHLKKAVMATITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALE 73
Query: 269 LRDNDKAHYHGKGVTKAVGFINNDIAPALL 298
LRD DK Y GKGV KAV +N IAPAL+
Sbjct: 74 LRDGDKD-YLGKGVLKAVKNVNEIIAPALI 102
>gnl|CDD|240259 PTZ00081, PTZ00081, enolase; Provisional.
Length = 439
Score = 332 bits (852), Expect = e-112
Identities = 137/212 (64%), Positives = 158/212 (74%), Gaps = 17/212 (8%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
I I AR+I DSRGNPTVEVDLTTE G+FRAAVPSGASTGIYEALELRD DK+ Y GK
Sbjct: 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTEN-----KSKFGANAILGV 114
GV KAV +N IAPAL+ +VT QK++D+ M++ LDGT+N KSK GANAIL V
Sbjct: 62 GVLKAVENVNEIIAPALI--GKDVTDQKKLDKLMVEQLDGTKNEWGWCKSKLGANAILAV 119
Query: 115 SLAVAKAGAAKKGVPLYKHLADLAGN--SNIILPVPAFNVINGGSHAGNKLAMQEFMILP 172
S+AVA+A AA KGVPLYK+LA LAG +LPVP FNVINGG HAGNKLA QEFMI P
Sbjct: 120 SMAVARAAAAAKGVPLYKYLAQLAGKPTDKFVLPVPCFNVINGGKHAGNKLAFQEFMIAP 179
Query: 173 TGKLRRVASSFLLREAMKIGSEVYHHLKKVIN 204
G A SF +EA+++G+EVYH LK VI
Sbjct: 180 VG-----APSF--KEALRMGAEVYHSLKSVIK 204
Score = 145 bits (369), Expect = 2e-40
Identities = 58/78 (74%), Positives = 63/78 (80%)
Query: 221 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 280
I I AR+I DSRGNPTVEVDLTTE G+FRAAVPSGASTGIYEALELRD DK+ Y GK
Sbjct: 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGK 61
Query: 281 GVTKAVGFINNDIAPALL 298
GV KAV +N IAPAL+
Sbjct: 62 GVLKAVENVNEIIAPALI 79
>gnl|CDD|234617 PRK00077, eno, enolase; Provisional.
Length = 425
Score = 319 bits (821), Expect = e-107
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 18/213 (8%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHG 59
I I AR+I DSRGNPTVEV++T E G F RAAVPSGASTG EA+ELRD DK+ Y G
Sbjct: 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLG 61
Query: 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVA 119
KGV KAV +N +IAPAL+ + Q+ ID+ MI+LDGT NKSK GANAILGVSLAVA
Sbjct: 62 KGVLKAVENVNEEIAPALI--GLDALDQRAIDKAMIELDGTPNKSKLGANAILGVSLAVA 119
Query: 120 KAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRV 179
KA A G+PLY++ L G + +LPVP N+INGG+HA N + +QEFMI+P G
Sbjct: 120 KAAADSLGLPLYRY---LGGPNAKVLPVPMMNIINGGAHADNNVDIQEFMIMPVG----- 171
Query: 180 ASSFLLREAMKIGSEVYHHLKKVI-----NTQV 207
A SF +EA+++G+EV+H LKKV+ +T V
Sbjct: 172 APSF--KEALRMGAEVFHTLKKVLKEKGLSTAV 202
Score = 145 bits (368), Expect = 3e-40
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 221 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHG 279
I I AR+I DSRGNPTVEV++T E G F RAAVPSGASTG EA+ELRD DK+ Y G
Sbjct: 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLG 61
Query: 280 KGVTKAVGFINNDIAPALL 298
KGV KAV +N +IAPAL+
Sbjct: 62 KGVLKAVENVNEEIAPALI 80
>gnl|CDD|223226 COG0148, Eno, Enolase [Carbohydrate transport and metabolism].
Length = 423
Score = 280 bits (719), Expect = 2e-92
Identities = 120/204 (58%), Positives = 147/204 (72%), Gaps = 14/204 (6%)
Query: 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGK 60
I + AR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD D Y GK
Sbjct: 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGDSR-YLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV +N IAPAL+ + T Q ID +I+LDGTENKSK GANAILGVSLAVAK
Sbjct: 62 GVLKAVANVNEIIAPALIG--LDATDQALIDSLLIELDGTENKSKLGANAILGVSLAVAK 119
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVA 180
A AA G+PLY++ L G + ++LPVP NVINGG+HA N L +QEFMI+P G A
Sbjct: 120 AAAASLGIPLYRY---LGGLNALVLPVPMMNVINGGAHADNNLDIQEFMIMPVG-----A 171
Query: 181 SSFLLREAMKIGSEVYHHLKKVIN 204
SF +EA++ G+EV+HHLKK++
Sbjct: 172 ESF--KEALRAGAEVFHHLKKLLK 193
Score = 118 bits (297), Expect = 3e-30
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 222 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGK 280
I + AR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD D Y GK
Sbjct: 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGDSR-YLGK 61
Query: 281 GVTKAVGFINNDIAPALL 298
GV KAV +N IAPAL+
Sbjct: 62 GVLKAVANVNEIIAPALI 79
>gnl|CDD|213580 TIGR01060, eno, phosphopyruvate hydratase. Alternate name: enolase
[Energy metabolism, Glycolysis/gluconeogenesis].
Length = 425
Score = 269 bits (689), Expect = 7e-88
Identities = 119/202 (58%), Positives = 144/202 (71%), Gaps = 13/202 (6%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I I AR+I DSRGNPTVEV++ E G F RAAVPSGASTG EALELRD DK Y GKG
Sbjct: 1 IVDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKG 60
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IAP L + T Q+EID+ +I+LDGT NKSK GANAILGVS+AVAKA
Sbjct: 61 VLKAVENVNEIIAPEL--IGMDATDQREIDQILIELDGTPNKSKLGANAILGVSMAVAKA 118
Query: 122 GAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVAS 181
A G+PLY++ L G + +LPVP N+INGG+HA N L QEFMI+P G A
Sbjct: 119 AADSLGLPLYRY---LGGFNAYVLPVPMMNIINGGAHADNNLDFQEFMIMPVG-----AP 170
Query: 182 SFLLREAMKIGSEVYHHLKKVI 203
SF REA+++G+EV+H LKK++
Sbjct: 171 SF--REALRMGAEVFHALKKLL 190
Score = 119 bits (301), Expect = 7e-31
Identities = 51/77 (66%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 223 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 281
I I AR+I DSRGNPTVEV++ E G F RAAVPSGASTG EALELRD DK Y GKG
Sbjct: 1 IVDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKG 60
Query: 282 VTKAVGFINNDIAPALL 298
V KAV +N IAP L+
Sbjct: 61 VLKAVENVNEIIAPELI 77
>gnl|CDD|202827 pfam03952, Enolase_N, Enolase, N-terminal domain.
Length = 132
Score = 233 bits (596), Expect = 6e-78
Identities = 86/133 (64%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I+KIHAR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD DK+ Y GKG
Sbjct: 2 ITKIHAREILDSRGNPTVEVEVTLEDGTFGRAAVPSGASTGSHEAVELRDGDKSRYGGKG 61
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IAPAL+ + Q+ ID+ +I+LDGT NKSK GANAIL VSLAVAKA
Sbjct: 62 VLKAVENVNEIIAPALIG--MDARDQRAIDKTLIELDGTPNKSKLGANAILAVSLAVAKA 119
Query: 122 GAAKKGVPLYKHL 134
AA G+PLY++L
Sbjct: 120 AAAALGLPLYRYL 132
Score = 141 bits (358), Expect = 5e-42
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 223 ISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKG 281
I+KIHAR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD DK+ Y GKG
Sbjct: 2 ITKIHAREILDSRGNPTVEVEVTLEDGTFGRAAVPSGASTGSHEAVELRDGDKSRYGGKG 61
Query: 282 VTKAVGFINNDIAPALLK 299
V KAV +N IAPAL+
Sbjct: 62 VLKAVENVNEIIAPALIG 79
>gnl|CDD|109180 pfam00113, Enolase_C, Enolase, C-terminal TIM barrel domain.
Length = 296
Score = 109 bits (274), Expect = 6e-28
Identities = 45/61 (73%), Positives = 49/61 (80%), Gaps = 7/61 (11%)
Query: 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGKLRRVASSFLLREAMKIGSEVYHHLKKV 202
+LPVP NVINGGSHAGNKLAMQEFMILPTG ASSF EAM++GSEVYH+LK V
Sbjct: 2 YVLPVPMMNVINGGSHAGNKLAMQEFMILPTG-----ASSF--TEAMRMGSEVYHNLKSV 54
Query: 203 I 203
I
Sbjct: 55 I 55
>gnl|CDD|169397 PRK08350, PRK08350, hypothetical protein; Provisional.
Length = 341
Score = 72.9 bits (179), Expect = 1e-14
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 16 GNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75
G +VEVD+ T+ G R A P + +Y A +AH +AV ++ I P
Sbjct: 17 GKYSVEVDVITDSGFGRFAAPIDENPSLYIA-------EAH-------RAVSEVDEIIGP 62
Query: 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135
L+ F+ ++Q+ ID ++ ++DGTE+ S GAN L VS+AVAKA A K +PLY +
Sbjct: 63 ELI--GFDASEQELIDSYLWEIDGTEDFSHIGANTALAVSVAVAKAAANSKNMPLYSY-- 118
Query: 136 DLAGNSNIILPVP 148
+ G LPVP
Sbjct: 119 -IGGTFTTELPVP 130
>gnl|CDD|235971 PRK07219, PRK07219, DNA topoisomerase I; Validated.
Length = 822
Score = 28.4 bits (64), Expect = 5.2
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 17/74 (22%)
Query: 175 KLRRVASSFLL-----REAMKIGSEVYHHLKKVINTQVRKQVFVRFYSSVRMPISKIHAR 229
KL + A ++ RE IG E YH L++V V++ RF S + +
Sbjct: 93 KLAKDADEIIIATDYDREGELIGKEAYHILREVCQVPVKR---ARF--------SSLTKK 141
Query: 230 QIFDSRGNPTVEVD 243
+I + NP E+D
Sbjct: 142 EIRKAFENP-DEID 154
>gnl|CDD|146279 pfam03557, Bunya_G1, Bunyavirus glycoprotein G1. Bunyavirus has
three genomic segments: small (S), middle-sized (M), and
large (L). The S segment encodes the nucleocapsid and a
non-structural protein. The M segment codes for two
glycoproteins, G1 and G2, and another non-structural
protein (NSm). The L segment codes for an RNA
polymerase. This family contains the G1 glycoprotein
which is the viral attachment protein.
Length = 871
Score = 28.5 bits (64), Expect = 5.4
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 23 DLTTELGLFRAAVPSGASTGIYEALELRDNDKA-HYHGKGVTKAVGFINNDIAPALLK 79
DL L A +S+ I + L +DND+ K TK F N + A+L
Sbjct: 129 DLNLALTTLHHAFRGTSSSYIAKLLSEKDNDQLVKLLSKIKTK---FPGNALLKAILD 183
Score = 28.5 bits (64), Expect = 5.4
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 243 DLTTELGLFRAAVPSGASTGIYEALELRDNDKA-HYHGKGVTKAVGFINNDIAPALLK 299
DL L A +S+ I + L +DND+ K TK F N + A+L
Sbjct: 129 DLNLALTTLHHAFRGTSSSYIAKLLSEKDNDQLVKLLSKIKTK---FPGNALLKAILD 183
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.134 0.376
Gapped
Lambda K H
0.267 0.0713 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 16,266,168
Number of extensions: 1599336
Number of successful extensions: 1326
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1291
Number of HSP's successfully gapped: 27
Length of query: 315
Length of database: 10,937,602
Length adjustment: 97
Effective length of query: 218
Effective length of database: 6,635,264
Effective search space: 1446487552
Effective search space used: 1446487552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.5 bits)