Query psy5702
Match_columns 235
No_of_seqs 149 out of 2808
Neff 10.6
Searched_HMMs 29240
Date Sat Aug 17 00:29:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-38 8.3E-43 244.0 13.7 197 6-209 35-249 (253)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 8E-37 2.7E-41 235.5 20.7 195 32-234 28-239 (253)
3 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-36 4E-41 232.4 20.9 205 22-233 4-231 (241)
4 1oy3_D Transcription factor in 100.0 6.9E-37 2.4E-41 238.8 19.9 198 21-226 3-266 (282)
5 2f8y_A Notch homolog 1, transl 100.0 2E-36 6.9E-41 228.7 18.8 195 6-207 3-215 (223)
6 1k1a_A B-cell lymphoma 3-encod 100.0 6.3E-36 2.1E-40 228.4 21.7 194 5-205 20-238 (241)
7 3b7b_A Euchromatic histone-lys 100.0 6E-36 2.1E-40 228.1 21.6 202 19-229 3-221 (237)
8 3aji_A 26S proteasome non-ATPa 100.0 1.1E-35 3.7E-40 225.9 22.0 193 5-204 17-226 (231)
9 1s70_B 130 kDa myosin-binding 100.0 5.3E-36 1.8E-40 236.0 19.1 198 5-210 51-291 (299)
10 2xai_A ASB-9, ankyrin repeat a 100.0 2E-35 6.7E-40 228.8 21.9 190 5-205 14-219 (261)
11 3b7b_A Euchromatic histone-lys 100.0 1.9E-35 6.4E-40 225.4 21.4 193 5-204 22-231 (237)
12 1wdy_A 2-5A-dependent ribonucl 100.0 8.5E-36 2.9E-40 232.6 20.0 222 4-233 15-268 (285)
13 4b93_B Ankyrin repeat domain-c 100.0 3.9E-36 1.3E-40 233.6 16.1 196 5-207 22-243 (269)
14 2xai_A ASB-9, ankyrin repeat a 100.0 8.1E-35 2.8E-39 225.3 22.8 191 26-226 2-207 (261)
15 3utm_A Tankyrase-1; tankyrase, 100.0 4.5E-35 1.5E-39 235.1 21.8 193 6-205 36-302 (351)
16 3d9h_A CDNA FLJ77766, highly s 100.0 5.6E-35 1.9E-39 229.0 21.4 197 20-226 52-263 (285)
17 3d9h_A CDNA FLJ77766, highly s 100.0 1E-34 3.6E-39 227.5 22.9 189 5-204 70-274 (285)
18 1n11_A Ankyrin; clathrin, BAND 100.0 2E-35 6.7E-40 244.5 19.1 218 6-232 158-391 (437)
19 1n11_A Ankyrin; clathrin, BAND 100.0 2.6E-35 9E-40 243.7 19.4 194 5-205 25-234 (437)
20 2dzn_A Probable 26S proteasome 100.0 1E-34 3.4E-39 220.0 20.5 190 5-201 13-226 (228)
21 1oy3_D Transcription factor in 100.0 6.1E-35 2.1E-39 227.8 19.1 183 5-194 20-269 (282)
22 1wdy_A 2-5A-dependent ribonucl 100.0 3.7E-34 1.3E-38 223.4 22.8 195 5-206 50-276 (285)
23 1ikn_D Protein (I-kappa-B-alph 100.0 7.6E-36 2.6E-40 227.6 12.8 180 22-207 3-208 (236)
24 3hra_A Ankyrin repeat family p 100.0 2.5E-34 8.7E-39 213.8 20.7 175 25-205 3-200 (201)
25 3aji_A 26S proteasome non-ATPa 100.0 5.4E-35 1.8E-39 222.0 16.9 199 24-230 3-217 (231)
26 3ljn_A Hypothetical protein; a 100.0 3.2E-35 1.1E-39 237.8 16.1 192 5-205 31-266 (364)
27 2rfa_A Transient receptor pote 100.0 2E-34 6.8E-39 219.1 18.4 179 26-210 2-224 (232)
28 2dzn_A Probable 26S proteasome 100.0 6E-34 2.1E-38 215.7 21.0 195 26-227 1-217 (228)
29 2fo1_E LIN-12 protein; beta-ba 100.0 1.6E-34 5.4E-39 234.6 18.6 193 9-208 148-371 (373)
30 4gpm_A Engineered protein OR26 100.0 4.6E-34 1.6E-38 206.8 18.7 153 29-205 6-158 (169)
31 3eu9_A Huntingtin-interacting 100.0 5.4E-34 1.8E-38 217.2 19.3 201 4-209 19-236 (240)
32 3ljn_A Hypothetical protein; a 100.0 1.4E-34 4.7E-39 234.1 15.0 206 18-234 11-260 (364)
33 3kea_A K1L; tropism, ANK repea 100.0 2.7E-34 9.1E-39 225.2 15.7 191 6-208 12-220 (285)
34 2fo1_E LIN-12 protein; beta-ba 100.0 8.1E-35 2.8E-39 236.3 12.5 215 18-234 115-362 (373)
35 4b93_B Ankyrin repeat domain-c 100.0 2.6E-34 8.9E-39 223.3 14.8 200 22-229 6-229 (269)
36 4gpm_A Engineered protein OR26 100.0 6.5E-33 2.2E-37 200.7 17.5 151 4-178 14-164 (169)
37 3utm_A Tankyrase-1; tankyrase, 100.0 2.1E-32 7.2E-37 219.5 22.0 182 5-193 69-323 (351)
38 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-32 3.9E-37 220.6 18.8 216 4-233 35-316 (337)
39 2rfm_A Putative ankyrin repeat 100.0 6.4E-33 2.2E-37 205.0 15.8 162 20-205 28-189 (192)
40 1s70_B 130 kDa myosin-binding 100.0 1.7E-32 6E-37 215.9 15.7 200 25-227 38-274 (299)
41 3v31_A Ankyrin repeat family A 100.0 1.1E-31 3.6E-36 194.1 18.0 156 26-205 2-157 (167)
42 3kea_A K1L; tropism, ANK repea 100.0 1.8E-32 6E-37 214.8 14.4 186 4-205 41-243 (285)
43 3f6q_A Integrin-linked protein 100.0 3.3E-31 1.1E-35 193.7 20.0 162 25-209 3-164 (179)
44 3twr_A Tankyrase-2; ankyrin re 100.0 1.1E-31 3.9E-36 193.6 16.6 160 22-205 3-162 (165)
45 3eu9_A Huntingtin-interacting 100.0 5.8E-32 2E-36 205.9 15.5 203 22-233 4-225 (240)
46 1sw6_A Regulatory protein SWI6 100.0 2.4E-32 8.3E-37 218.0 13.5 174 6-194 109-327 (327)
47 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.4E-31 8E-36 192.8 17.5 160 21-204 8-167 (169)
48 4hbd_A KN motif and ankyrin re 100.0 8.8E-32 3E-36 209.9 16.3 178 7-207 89-274 (276)
49 2etb_A Transient receptor pote 100.0 1.7E-32 5.9E-37 211.5 11.9 175 8-206 20-244 (256)
50 3v30_A DNA-binding protein rfx 100.0 1.1E-31 3.7E-36 195.0 14.4 158 27-207 2-159 (172)
51 1awc_B Protein (GA binding pro 100.0 5.8E-31 2E-35 187.6 16.8 151 27-202 2-152 (153)
52 2pnn_A Transient receptor pote 100.0 6.8E-32 2.3E-36 210.1 10.7 160 24-206 51-256 (273)
53 1ihb_A P18-INK4C(INK6), cyclin 100.0 7E-31 2.4E-35 188.8 14.5 155 26-205 4-159 (162)
54 2f8y_A Notch homolog 1, transl 100.0 6.3E-30 2.2E-34 193.0 20.3 167 5-177 36-218 (223)
55 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.5E-30 5.1E-35 185.9 15.7 154 27-205 2-155 (156)
56 1ikn_D Protein (I-kappa-B-alph 100.0 4.2E-31 1.4E-35 201.3 12.5 170 17-193 35-229 (236)
57 3jxi_A Vanilloid receptor-rela 100.0 4.8E-31 1.7E-35 203.7 12.3 179 7-208 22-250 (260)
58 4g8k_A 2-5A-dependent ribonucl 100.0 6.1E-30 2.1E-34 204.8 18.2 185 9-205 107-323 (337)
59 3hra_A Ankyrin repeat family p 100.0 2.5E-29 8.5E-34 186.8 18.7 162 5-173 16-201 (201)
60 2rfa_A Transient receptor pote 100.0 1.1E-29 3.8E-34 192.8 16.7 176 4-180 13-227 (232)
61 2etb_A Transient receptor pote 100.0 5.1E-31 1.7E-35 203.2 8.1 191 26-234 1-237 (256)
62 2vge_A RELA-associated inhibit 100.0 3E-31 1E-35 201.4 6.5 199 11-235 2-205 (229)
63 3v30_A DNA-binding protein rfx 100.0 2.1E-29 7.2E-34 182.9 15.2 159 4-186 12-171 (172)
64 1sw6_A Regulatory protein SWI6 100.0 3.9E-29 1.3E-33 199.5 14.0 207 5-228 58-326 (327)
65 1bi7_B P16INK4A, MTS1, multipl 100.0 4.8E-29 1.7E-33 178.3 11.5 145 22-191 7-152 (156)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.8E-28 9.6E-33 175.1 15.1 146 5-175 16-162 (162)
67 3t8k_A Uncharacterized protein 100.0 3.1E-29 1.1E-33 184.2 9.9 160 27-206 6-177 (186)
68 1d9s_A Cyclin-dependent kinase 100.0 1E-28 3.4E-33 172.6 11.9 134 17-175 2-136 (136)
69 2y1l_E Darpin-8.4; hydrolase-i 100.0 9E-28 3.1E-32 173.8 17.4 146 4-173 24-169 (169)
70 2pnn_A Transient receptor pote 100.0 2.8E-28 9.4E-33 189.7 14.1 167 4-187 67-271 (273)
71 3f6q_A Integrin-linked protein 100.0 8.8E-28 3E-32 175.5 15.7 155 5-183 16-171 (179)
72 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-28 3.8E-33 188.4 11.0 159 24-207 2-166 (239)
73 3jxi_A Vanilloid receptor-rela 100.0 2.5E-29 8.5E-34 194.1 6.4 193 24-234 2-241 (260)
74 3v31_A Ankyrin repeat family A 100.0 2E-27 6.8E-32 171.6 14.9 149 4-176 13-161 (167)
75 2rfm_A Putative ankyrin repeat 100.0 3.8E-27 1.3E-31 173.9 16.2 145 5-173 46-190 (192)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.8E-28 1.7E-32 184.9 10.5 167 4-195 15-193 (239)
77 1awc_B Protein (GA binding pro 99.9 1.6E-26 5.5E-31 164.5 17.1 140 5-169 13-152 (153)
78 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.7E-26 9.2E-31 157.6 16.7 126 26-175 1-126 (126)
79 4hbd_A KN motif and ankyrin re 99.9 3.5E-28 1.2E-32 189.5 7.2 188 27-234 76-266 (276)
80 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-26 6.3E-31 166.2 15.2 145 5-174 19-164 (165)
81 2vge_A RELA-associated inhibit 99.9 1.4E-29 4.7E-34 192.2 -1.8 173 5-204 32-209 (229)
82 1d9s_A Cyclin-dependent kinase 99.9 6.6E-27 2.3E-31 163.3 11.7 131 51-205 2-133 (136)
83 3c5r_A BARD-1, BRCA1-associate 99.9 2E-26 6.9E-31 161.0 13.7 127 56-205 5-131 (137)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 3.9E-26 1.3E-30 159.4 14.4 127 23-173 10-136 (136)
85 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-25 4E-30 160.4 15.4 142 5-172 13-155 (156)
86 3aaa_C Myotrophin, protein V-1 99.9 2.3E-25 7.9E-30 152.7 12.6 120 58-200 4-123 (123)
87 3c5r_A BARD-1, BRCA1-associate 99.9 7.1E-26 2.4E-30 158.2 9.9 132 18-174 2-133 (137)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 2.7E-25 9.4E-30 155.1 11.7 125 57-204 10-134 (136)
89 3t8k_A Uncharacterized protein 99.9 3.5E-26 1.2E-30 167.9 6.2 153 7-180 19-184 (186)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-24 5.6E-29 148.6 13.6 123 60-205 1-123 (126)
91 2b0o_E UPLC1; arfgap, structur 99.9 6.6E-25 2.3E-29 172.9 12.8 141 25-195 149-298 (301)
92 3deo_A Signal recognition part 99.9 5.6E-25 1.9E-29 161.2 11.2 140 24-205 41-181 (183)
93 1bi7_B P16INK4A, MTS1, multipl 99.9 3.5E-25 1.2E-29 158.1 9.6 128 55-206 6-134 (156)
94 3ehr_A Osteoclast-stimulating 99.9 3.9E-25 1.3E-29 166.8 9.9 131 26-180 72-203 (222)
95 3ui2_A Signal recognition part 99.9 1.1E-24 3.7E-29 166.8 10.5 139 25-205 43-182 (244)
96 3aaa_C Myotrophin, protein V-1 99.9 5.5E-24 1.9E-28 145.8 11.2 117 24-164 4-120 (123)
97 3ehr_A Osteoclast-stimulating 99.9 4.8E-24 1.6E-28 160.8 10.8 129 58-209 70-199 (222)
98 2aja_A Ankyrin repeat family p 99.9 1.2E-26 4.1E-31 187.6 -6.3 49 182-235 318-366 (376)
99 3lvq_E ARF-GAP with SH3 domain 99.9 1E-22 3.4E-27 171.0 15.6 137 25-191 130-275 (497)
100 2aja_A Ankyrin repeat family p 99.9 9.7E-26 3.3E-30 182.3 -3.2 151 24-205 89-247 (376)
101 1dcq_A PYK2-associated protein 99.9 1.9E-22 6.4E-27 157.1 14.8 121 30-174 133-262 (278)
102 3jue_A Arfgap with coiled-coil 99.9 1.1E-22 3.9E-27 163.8 13.5 148 22-193 194-347 (368)
103 1dcq_A PYK2-associated protein 99.9 1.8E-21 6.3E-26 151.5 16.7 172 23-214 62-269 (278)
104 3deo_A Signal recognition part 99.9 2.1E-22 7.1E-27 147.4 10.5 114 58-194 41-154 (183)
105 2b0o_E UPLC1; arfgap, structur 99.9 4.8E-22 1.6E-26 156.5 12.6 143 61-231 151-299 (301)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.8E-21 6.3E-26 126.6 12.2 75 27-102 2-76 (93)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.6E-21 1.2E-25 125.2 13.0 81 5-86 13-93 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 3.8E-22 1.3E-26 134.9 8.3 109 56-187 4-112 (115)
109 3ui2_A Signal recognition part 99.9 1.7E-21 5.9E-26 149.0 11.5 130 4-175 55-185 (244)
110 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-21 4.8E-26 132.1 8.7 110 20-153 2-111 (115)
111 3jue_A Arfgap with coiled-coil 99.9 3.7E-21 1.3E-25 155.0 12.1 127 57-206 195-324 (368)
112 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-20 5E-25 157.8 13.0 127 61-207 132-264 (497)
113 2zgd_A 3 repeat synthetic anky 99.8 4.3E-19 1.5E-23 118.9 10.7 92 21-113 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 9.8E-18 3.3E-22 112.3 9.9 92 55-169 18-109 (110)
115 1gp8_A Protein (scaffolding pr 50.1 15 0.0005 18.5 2.3 17 65-81 17-33 (40)
116 3mkq_B Coatomer subunit alpha; 49.9 63 0.0022 22.6 8.9 117 28-171 9-139 (177)
117 4g26_A Pentatricopeptide repea 45.7 72 0.0024 26.4 7.4 128 30-170 32-198 (501)
118 2dkl_A Trinucleotide repeat co 40.3 28 0.00097 21.1 3.1 44 124-178 22-65 (85)
119 1vek_A UBP14, ubiquitin-specif 39.1 31 0.0011 20.8 3.1 47 123-179 29-75 (84)
120 2dag_A Ubiquitin carboxyl-term 36.4 44 0.0015 19.5 3.4 45 123-178 9-54 (74)
121 3zrh_A Ubiquitin thioesterase 35.7 1.3E+02 0.0046 24.3 6.9 49 34-82 29-90 (454)
122 2crn_A Ubash3A protein; compac 33.9 26 0.00088 19.9 2.0 45 124-179 10-55 (64)
123 4a1x_C CP5-46-A peptide; hydro 31.1 13 0.00046 16.1 0.4 13 222-234 7-19 (26)
124 2dai_A Ubadc1, ubiquitin assoc 29.6 52 0.0018 19.8 3.0 46 123-179 29-74 (83)
125 1whc_A RSGI RUH-027, UBA/UBX 3 28.0 47 0.0016 18.8 2.5 44 124-178 10-54 (64)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-38 Score=244.03 Aligned_cols=197 Identities=28% Similarity=0.283 Sum_probs=155.7
Q ss_pred hHHHHHHHhhhhceeEe-ecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 6 LGDTVEDVGAEVRSWVI-NKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
..+.++.++..+.+.+. .|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.+
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 113 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 113 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHST
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 56788888888888865 488899999999999999999998887 7888888888999999999999999999999887
Q ss_pred C-CCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhc
Q psy5702 85 A-DPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFL 147 (235)
Q Consensus 85 ~-~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 147 (235)
. +++..+..|.||||+|+..++.+++++| |||+|+..|+.+++++|+++|++++..+
T Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~------ 187 (253)
T 1yyh_A 114 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN------ 187 (253)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC------
T ss_pred CCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC------
Confidence 7 8888888899999999999998888887 8999999999999999999998888877
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCC
Q psy5702 148 SLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGH 209 (235)
Q Consensus 148 ~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~ 209 (235)
..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+..++.++++++.......
T Consensus 188 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~ 249 (253)
T 1yyh_A 188 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-----
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Confidence 78889999999999999999999999999999999999999999998999988887665443
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8e-37 Score=235.52 Aligned_cols=195 Identities=23% Similarity=0.154 Sum_probs=158.1
Q ss_pred HHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHH
Q psy5702 32 HRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVR 111 (235)
Q Consensus 32 ~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~ 111 (235)
..+...++.+++++|++.+....+..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++
T Consensus 28 ~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 107 (253)
T 1yyh_A 28 NSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 107 (253)
T ss_dssp ------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred chhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 44778899999999999844444566899999999999999999999999999999999999999999999999999999
Q ss_pred Hh-----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCC
Q psy5702 112 LL-----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGA 174 (235)
Q Consensus 112 ~l-----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga 174 (235)
+| |+|.|+..++.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+
T Consensus 108 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~ga 181 (253)
T 1yyh_A 108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD------DLGKSALHWAAAVNNVDAAVVLLKNGA 181 (253)
T ss_dssp HHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC------TTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 88 8999999999999999999999999888 789999999999999999999999999
Q ss_pred CCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCCC
Q psy5702 175 DPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPLA 234 (235)
Q Consensus 175 ~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 234 (235)
+++.+|..|.||||+|+..+..++++.++... .+....+..|.+++..+...|+.+++
T Consensus 182 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 182 NKDMQNNREETPLFLAAREGSYETAKVLLDHF--ANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCccccccCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999999999888763 33444566788999999998887664
No 3
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.2e-36 Score=232.43 Aligned_cols=205 Identities=27% Similarity=0.305 Sum_probs=148.7
Q ss_pred eecCCCCcHHHHHHHcCCHHHHHHHHH---hCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy5702 22 INKHHGETPLHRAARLGYIDAVAYCLE---KFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPL 98 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~~~~~~v~~li~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 98 (235)
.+|..|.||||+|++.|+.+++++|++ ..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.|||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 467778888888888888888777776 24667777777788888888888888888888888888777777778888
Q ss_pred HHHHHhCChhHHHHh--------------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHH
Q psy5702 99 HDAAEKGCVEMVRLL--------------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAA 158 (235)
Q Consensus 99 ~~a~~~~~~~~~~~l--------------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~ 158 (235)
|+|+..++.+++++| |+|.|+..|+.+++++|++.|++++..+. ..|.||||+|+
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-----~~g~t~L~~A~ 158 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDI-----KSGRSPLIHAV 158 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----TTCCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccc-----cCCCcHHHHHH
Confidence 888887777777766 77788888888888888887777766542 45778888888
Q ss_pred hcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCC
Q psy5702 159 EKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPL 233 (235)
Q Consensus 159 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 233 (235)
..++.+++++|+++|++++.+|..|.||||+|+..+..++++.++.. +.+....+..|.+++..+...|+.++
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS--GADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc--CCCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 88888888888888888887777788888888777777777777654 22333334455566666666555444
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.9e-37 Score=238.83 Aligned_cols=198 Identities=29% Similarity=0.270 Sum_probs=168.8
Q ss_pred EeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcH
Q psy5702 21 VINKHHGETPLHRAARLGYIDAVAYCLEKFSHG---PAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRP 97 (235)
Q Consensus 21 ~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 97 (235)
+.+|..|.||||+|++.|+.+++++|++. +.. ++.++..|.||||+|+..|+.+++++|++.|++++.++..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 56899999999999999999999999998 554 77889999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHh---------------------------------------------------------------H
Q psy5702 98 LHDAAEKGCVEMVRLL---------------------------------------------------------------P 114 (235)
Q Consensus 98 l~~a~~~~~~~~~~~l---------------------------------------------------------------~ 114 (235)
||+|+..++.+++++| |
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 9999999999998765 7
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchh
Q psy5702 115 LHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDET 194 (235)
Q Consensus 115 l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~ 194 (235)
||+|+..|+.+++++|+++|++++..+. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEP-----TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCC-----CCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 9999999999999999999999988762 34999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHhhccccCCCCCcccccCCCcccccc
Q psy5702 195 TRKLLQYHLADVRGHEAPKWDFAGPASCFDKQ 226 (235)
Q Consensus 195 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (235)
..++++.++...- +....+..|.+++..+.
T Consensus 237 ~~~~v~~Ll~~ga--~~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 237 NPILARLLRAHGA--PEPEDGGDKLSPCSSSG 266 (282)
T ss_dssp CHHHHHHHHHTTC--CCCCCC-----------
T ss_pred CcHHHHHHHHcCC--CcCcCCCcccccccccC
Confidence 8888888776533 23333334444444433
No 5
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-36 Score=228.70 Aligned_cols=195 Identities=28% Similarity=0.266 Sum_probs=181.7
Q ss_pred hHHHHHHHhhhhceeEee-cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 6 LGDTVEDVGAEVRSWVIN-KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
..++++.++..+.+++.. |..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.+
T Consensus 3 ~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 3 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp --CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred cHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 346677888888888765 89999999999999999999999998 8889999999999999999999999999999998
Q ss_pred C-CCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhc
Q psy5702 85 A-DPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFL 147 (235)
Q Consensus 85 ~-~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 147 (235)
. +++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------ 155 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN------ 155 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC------
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC------
Confidence 7 8899999999999999999999999998 9999999999999999999999999888
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcccc
Q psy5702 148 SLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVR 207 (235)
Q Consensus 148 ~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~ 207 (235)
..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++++++.....
T Consensus 156 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 156 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 789999999999999999999999999999999999999999999999999998876543
No 6
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.3e-36 Score=228.40 Aligned_cols=194 Identities=29% Similarity=0.338 Sum_probs=179.4
Q ss_pred chHHHHHHHhh----hhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHH
Q psy5702 5 SLGDTVEDVGA----EVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLL 80 (235)
Q Consensus 5 ~~~~~~~~~~~----~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 80 (235)
+..+.++.++. .+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|
T Consensus 20 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 98 (241)
T 1k1a_A 20 GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA-GASPMALDRHGQTAAHLACEHRSPTCLRAL 98 (241)
T ss_dssp TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34556666665 7899999999999999999999999999999998 888999999999999999999999999999
Q ss_pred HhcCC----CCCCCCCCCCcHHHHHHHhCChhHHHHh-----------------HHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy5702 81 LMYGA----DPSDSAIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLSYGADPLL 139 (235)
Q Consensus 81 l~~g~----~~~~~~~~g~t~l~~a~~~~~~~~~~~l-----------------~l~~a~~~~~~~~~~~l~~~g~~~~~ 139 (235)
++.++ +++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++.
T Consensus 99 l~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 99 LDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA 178 (241)
T ss_dssp HHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99987 8889999999999999999999999988 99999999999999999999999998
Q ss_pred hhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 140 ASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 140 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++++.+...
T Consensus 179 ~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 179 QM------YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp BC------TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred cC------CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 88 7899999999999999999999999999999999999999999999999999887654
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6e-36 Score=228.12 Aligned_cols=202 Identities=27% Similarity=0.342 Sum_probs=148.4
Q ss_pred eeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy5702 19 SWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPL 98 (235)
Q Consensus 19 ~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 98 (235)
+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.|||
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 4556777777888888888888888777777 667777777778888888888888888888877777777777777888
Q ss_pred HHHHHhCChhHHHHh-----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcC
Q psy5702 99 HDAAEKGCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKG 161 (235)
Q Consensus 99 ~~a~~~~~~~~~~~l-----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~ 161 (235)
|+|+..++.+++++| |++.|+..++.+++++|+++|++++..+ ..|.||||+|+..|
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRD------NEENICLHWAAFSG 155 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccC------CCCCCHHHHHHHCC
Confidence 888777777777776 7777777778888888887777777666 67778888888888
Q ss_pred CHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCccccccccc
Q psy5702 162 CVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVG 229 (235)
Q Consensus 162 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 229 (235)
+.+++++|+++|++++.+|..|.||||+|+..+..++++.++... .+....+..|.+++..+...|
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD--SDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT--CCTTCCCTTSCCHHHHSCTTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC--CCCCccCCCCCCHHHHHHHHH
Confidence 888888888878887777777788888887777777777776552 222333344445554444433
No 8
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.1e-35 Score=225.90 Aligned_cols=193 Identities=30% Similarity=0.373 Sum_probs=176.7
Q ss_pred chHHHHHHHhhhh-ceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 5 SLGDTVEDVGAEV-RSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 5 ~~~~~~~~~~~~~-~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
+..+.++.++..+ ...+.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.
T Consensus 17 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 95 (231)
T 3aji_A 17 GKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95 (231)
T ss_dssp TCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHc
Confidence 3456666666654 44677899999999999999999999999998 888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhc
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFL 147 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 147 (235)
|++++.++..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+
T Consensus 96 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------ 169 (231)
T 3aji_A 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD------ 169 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC------
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccC------
Confidence 999999999999999999999999999988 8999999999999999999999999888
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhc
Q psy5702 148 SLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLA 204 (235)
Q Consensus 148 ~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~ 204 (235)
..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++.+.+..
T Consensus 170 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 170 TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 789999999999999999999999999999999999999999998877777776554
No 9
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=5.3e-36 Score=236.00 Aligned_cols=198 Identities=28% Similarity=0.306 Sum_probs=180.3
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|
T Consensus 51 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g 129 (299)
T 1s70_B 51 GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQG 129 (299)
T ss_dssp TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 456889999999999999999999999999999999999999998 8899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHh-------------------------------------------HHHHHHHc
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL-------------------------------------------PLHDAAEK 121 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l-------------------------------------------~l~~a~~~ 121 (235)
++++..+..|.||||+|+..++.++++.+ |||+|+..
T Consensus 130 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 130 AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 99999999999999999988877776542 79999999
Q ss_pred CCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHH
Q psy5702 122 GCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQY 201 (235)
Q Consensus 122 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~ 201 (235)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|++. ..++++.
T Consensus 210 g~~~~v~~Ll~~g~d~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~ 282 (299)
T 1s70_B 210 GYTEVLKLLIQARYDVNIKD------YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEE 282 (299)
T ss_dssp TCHHHHHHHHTTTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCcC------CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHH
Confidence 99999999999999999888 7899999999999999999999999999999999999999999875 4556666
Q ss_pred hhccccCCC
Q psy5702 202 HLADVRGHE 210 (235)
Q Consensus 202 ~~~~~~~~~ 210 (235)
+........
T Consensus 283 l~~~~~~~~ 291 (299)
T 1s70_B 283 LQKKQNLLH 291 (299)
T ss_dssp HHHHTTSCC
T ss_pred HHHHHhhhh
Confidence 555544433
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=228.78 Aligned_cols=190 Identities=28% Similarity=0.325 Sum_probs=172.8
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|
T Consensus 14 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 92 (261)
T 2xai_A 14 GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 92 (261)
T ss_dssp TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 456889999999999999999999999999999999999999998 8899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhcc
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS 148 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 148 (235)
++++.. ..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++. + .
T Consensus 93 ~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~------~ 164 (261)
T 2xai_A 93 ASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-G------K 164 (261)
T ss_dssp CCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-C------B
T ss_pred CCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-C------C
Confidence 999864 4589999999999999999988 99999999999999999999999885 3 6
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 149 LPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 149 ~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.|.||||+|+..++.+++++|+++|++++.+|..|+||+|+|+..+. +++.+...
T Consensus 165 ~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~--~~~~ll~~ 219 (261)
T 2xai_A 165 GQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESP--LAQLFLER 219 (261)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCT--HHHHHHHC
T ss_pred CCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccccc--HHHHHHhc
Confidence 89999999999999999999999999999999999999999996543 44444443
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.9e-35 Score=225.38 Aligned_cols=193 Identities=30% Similarity=0.314 Sum_probs=181.7
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++..+..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|++.|
T Consensus 22 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~ 100 (237)
T 3b7b_A 22 GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKA-GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100 (237)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 456889999999999999999999999999999999999999988 8889999999999999999999999999999998
Q ss_pred -CCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhc
Q psy5702 85 -ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFL 147 (235)
Q Consensus 85 -~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 147 (235)
.+++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+
T Consensus 101 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------ 174 (237)
T 3b7b_A 101 QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVN------ 174 (237)
T ss_dssp CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCC------
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcC------
Confidence 89999999999999999999999999998 8999999999999999999999999887
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhc
Q psy5702 148 SLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLA 204 (235)
Q Consensus 148 ~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~ 204 (235)
..|.||||+|+..++.+++++|+++|++++.+|..|.||+|+|+..+....+.++..
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 175 IHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999887765555443
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.5e-36 Score=232.65 Aligned_cols=222 Identities=27% Similarity=0.327 Sum_probs=193.6
Q ss_pred cchHHHHHHHhhhhceeEee-cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHh
Q psy5702 4 QSLGDTVEDVGAEVRSWVIN-KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLM 82 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 82 (235)
.+..+.++.++..+.+++.+ +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++
T Consensus 15 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (285)
T 1wdy_A 15 NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFLLAAIAGSVKLLKLFLS 93 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34568899999999999888 78899999999999999999999998 88888999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCChhHHHHh--------------------------HHHHHHHcCCHHHHHHHHHc-CC
Q psy5702 83 YGADPSDSAIGGIRPLHDAAEKGCVEMVRLL--------------------------PLHDAAEKGCVEMVRLLLSY-GA 135 (235)
Q Consensus 83 ~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l--------------------------~l~~a~~~~~~~~~~~l~~~-g~ 135 (235)
.|++++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|++. |.
T Consensus 94 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 173 (285)
T 1wdy_A 94 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 173 (285)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCC
T ss_pred cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCC
Confidence 9999999999999999999999999999887 79999999999999999987 89
Q ss_pred CCcchhhhhhhccCCCchHHHHHhcCC----HHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCC
Q psy5702 136 DPLLASYAVYFLSLPSRPLHDAAEKGC----VEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEA 211 (235)
Q Consensus 136 ~~~~~~~~~~~~~~~~t~L~~A~~~~~----~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~ 211 (235)
+++..+ ..|.||||.|+..+. .+++++|+++|++++.+|..|.||||+|+..+..+++++++... +.+.
T Consensus 174 ~~~~~~------~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-g~~~ 246 (285)
T 1wdy_A 174 DVNACD------NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEI 246 (285)
T ss_dssp CTTCCC------TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSS-SCCT
T ss_pred CCCccC------CCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcc-CCCc
Confidence 988887 789999999999998 88999999999999999999999999999999999999888732 2223
Q ss_pred CcccccCCCcccccccccCCCC
Q psy5702 212 PKWDFAGPASCFDKQMVGYEPL 233 (235)
Q Consensus 212 ~~~~~~~~~~~~~~~~~g~~~~ 233 (235)
...+..|.+++..+...|+.++
T Consensus 247 ~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 247 NDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHH
T ss_pred cccCCCCCcHHHHHHHcCcHHH
Confidence 3344566677777766665544
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=233.60 Aligned_cols=196 Identities=27% Similarity=0.268 Sum_probs=142.7
Q ss_pred chHHHHHHHhhhhce--------eEeecCCCCcHHHHHHHcCCHH-HHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHH
Q psy5702 5 SLGDTVEDVGAEVRS--------WVINKHHGETPLHRAARLGYID-AVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLD 75 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~--------~~~~d~~g~~~L~~A~~~~~~~-~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 75 (235)
+-.+.++.++..+.+ +...|..|.+||++|+..+..+ ++++|++. |.+++..|..|.||||+|+..|+.+
T Consensus 22 G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~~d~~G~TpLh~A~~~g~~~ 100 (269)
T 4b93_B 22 GDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNVTSQDGSSPLHVAALHGRAD 100 (269)
T ss_dssp TCHHHHHHHHTCC----------------------------------------C-CCCTTCCCTTSCCHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 445777888776654 4567788889999998877654 67777776 8888888999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy5702 76 IARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLL 139 (235)
Q Consensus 76 ~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~ 139 (235)
++++|++.|++++..+..|.||+++|+..++.+++++| |||+|+..|+.+++++|+++|++++.
T Consensus 101 ~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 101 LIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA 180 (269)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC
T ss_pred HHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc
Confidence 99999999999999889999999999999999988887 89999999999999999999999998
Q ss_pred hhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhh-HHHHHHhhcccc
Q psy5702 140 ASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETT-RKLLQYHLADVR 207 (235)
Q Consensus 140 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~-~~~l~~~~~~~~ 207 (235)
.+ ..|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|++++. .++++.+++...
T Consensus 181 ~~------~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~ 243 (269)
T 4b93_B 181 SN------NKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVA 243 (269)
T ss_dssp BC------TTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC------
T ss_pred cc------cCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhch
Confidence 88 799999999999999999999999999999999999999999998764 566665555433
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=225.32 Aligned_cols=191 Identities=26% Similarity=0.300 Sum_probs=173.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKG 105 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 105 (235)
+|+||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 689999999999999999999998 8889999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHh---------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHH
Q psy5702 106 CVEMVRLL---------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLL 170 (235)
Q Consensus 106 ~~~~~~~l---------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 170 (235)
+.+++++| |+|.|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKI------SHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp CHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB------TTTBCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCC------CCCCCHHHHHHHhCCHHHHHHHH
Confidence 99999998 8999999999999999999999999888 78999999999999999999999
Q ss_pred HCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccc
Q psy5702 171 SYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQ 226 (235)
Q Consensus 171 ~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (235)
++|++++. +..|.||||+|+..+..++++.++.. +.+....+..|.+++..+.
T Consensus 155 ~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~--gad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 155 ESGADVNQ-GKGQDSPLHAVARTASEELACLLMDF--GADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp HHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCGGGGSC
T ss_pred HcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCChhhhcc
Confidence 99999995 88899999999999888888887766 3333444555666666554
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.5e-35 Score=235.09 Aligned_cols=193 Identities=27% Similarity=0.293 Sum_probs=175.8
Q ss_pred hHHHHHHHhhh-hceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 6 LGDTVEDVGAE-VRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
..+.++.++.. +.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|
T Consensus 36 ~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 114 (351)
T 3utm_A 36 NEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 114 (351)
T ss_dssp CHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCC
Confidence 34555555554 888889999999999999999999999999998 8889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHh---------------------------------------------------
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL--------------------------------------------------- 113 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l--------------------------------------------------- 113 (235)
++++..+..|.||||+|+..++.+++++|
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
T 3utm_A 115 ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKV 194 (351)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHH
Confidence 99999999999999999999999998876
Q ss_pred -------------------HHHHHHHc---CCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHH
Q psy5702 114 -------------------PLHDAAEK---GCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLS 171 (235)
Q Consensus 114 -------------------~l~~a~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~ 171 (235)
|+|.|+.. +..+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 195 ~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~ 268 (351)
T 3utm_A 195 KKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKN------KDFMTPLHVAAERAHNDVMEVLHK 268 (351)
T ss_dssp HHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcC------CCCCCHHHHHHHcCCHHHHHHHHH
Confidence 57778877 56889999999999999888 789999999999999999999999
Q ss_pred CCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 172 YGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 172 ~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
+|++++.+|..|.||||+|+..+..++++.++..
T Consensus 269 ~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 302 (351)
T 3utm_A 269 HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302 (351)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 9999999999999999999999999998888776
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.6e-35 Score=229.04 Aligned_cols=197 Identities=25% Similarity=0.281 Sum_probs=152.4
Q ss_pred eEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy5702 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLH 99 (235)
Q Consensus 20 ~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 99 (235)
++.+|..|+||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHT-TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 455777888888888888888888888887 6777778888888888888888888888888888888888888888888
Q ss_pred HHHHhCChhHHHHh---------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHH
Q psy5702 100 DAAEKGCVEMVRLL---------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVE 164 (235)
Q Consensus 100 ~a~~~~~~~~~~~l---------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 164 (235)
+|+..++.+++++| |+|+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKI------SHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCB------TTTBCHHHHHHHTTCHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHcCcHH
Confidence 88888888888877 7888888888888888888888877776 67888888888888888
Q ss_pred HHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccc
Q psy5702 165 MVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQ 226 (235)
Q Consensus 165 ~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (235)
++++|+++|++++. +..|.||||+|+..+..++++.++.. +.+....+..|.+++..+.
T Consensus 205 ~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 205 CVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDF--GADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCGGGGSC
T ss_pred HHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHhc
Confidence 88888888888874 77788888888887777777777654 2223333334444444443
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=227.50 Aligned_cols=189 Identities=28% Similarity=0.324 Sum_probs=174.3
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|
T Consensus 70 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (285)
T 3d9h_A 70 GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 148 (285)
T ss_dssp TCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCC
Confidence 456889999999999999999999999999999999999999998 8899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhcc
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS 148 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 148 (235)
++++..+ .|.||||+|+..++.+++++| |++.|+..|+.+++++|++.|++++. + .
T Consensus 149 ~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~------~ 220 (285)
T 3d9h_A 149 ASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-G------K 220 (285)
T ss_dssp CCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-C------B
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-C------C
Confidence 9998655 499999999999999999998 99999999999999999999999884 4 6
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhc
Q psy5702 149 LPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLA 204 (235)
Q Consensus 149 ~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~ 204 (235)
.|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+.. .++++.++.
T Consensus 221 ~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~--~~~~~~Ll~ 274 (285)
T 3d9h_A 221 GQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLE 274 (285)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--SHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc--cHHHHHHHH
Confidence 899999999999999999999999999999999999999999953 344444443
No 18
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2e-35 Score=244.49 Aligned_cols=218 Identities=29% Similarity=0.404 Sum_probs=163.2
Q ss_pred hHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCC
Q psy5702 6 LGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGA 85 (235)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 85 (235)
..+.++.++..+.+.+..+..|.||||+|+..++.+++++|++. +..++..+..|.||||+|+..|+.+++++|++.|+
T Consensus 158 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 236 (437)
T 1n11_A 158 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236 (437)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34666777777777777777777777777777777777777766 55666666777777777777777777777777777
Q ss_pred CCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccC
Q psy5702 86 DPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSL 149 (235)
Q Consensus 86 ~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 149 (235)
+++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+ ..
T Consensus 237 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~ 310 (437)
T 1n11_A 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT------RM 310 (437)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC------SS
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCC------CC
Confidence 7777777777777777777777777776 7888888888888888888888777776 67
Q ss_pred CCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCccccccccc
Q psy5702 150 PSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVG 229 (235)
Q Consensus 150 ~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 229 (235)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.++.. +.+....+..|.+++..+...|
T Consensus 311 g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 311 GYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN--GASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp CCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCSSSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHcC
Confidence 88888888888888888888888888888888888888888888888888877765 3333334455666666666666
Q ss_pred CCC
Q psy5702 230 YEP 232 (235)
Q Consensus 230 ~~~ 232 (235)
|.+
T Consensus 389 ~~~ 391 (437)
T 1n11_A 389 YIS 391 (437)
T ss_dssp CHH
T ss_pred cHH
Confidence 543
No 19
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-35 Score=243.70 Aligned_cols=194 Identities=34% Similarity=0.431 Sum_probs=154.3
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..++++.++..+.+.+.+|..|.||||+|+..|+.+++++|++. +.+++.++..|.||||+|+..|+.+++++|++.|
T Consensus 25 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 103 (437)
T 1n11_A 25 GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 103 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC
Confidence 456788888888888888888999999999999999999999988 7788888888999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhcc
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS 148 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 148 (235)
++++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+ .
T Consensus 104 a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~------~ 177 (437)
T 1n11_A 104 ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG------K 177 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------S
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC------C
Confidence 99988888889999999988888888877 7888888888888888888887777665 5
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 149 LPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 149 ~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..+..++++.++..
T Consensus 178 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 234 (437)
T 1n11_A 178 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY 234 (437)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 666666666666666666666666666666666666666666666655665555543
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1e-34 Score=220.02 Aligned_cols=190 Identities=25% Similarity=0.352 Sum_probs=158.7
Q ss_pred chHHHHHHHhhhhceeEe-ecCCCCcHHHHHHHcCCHHHHHHHHHhCC--CCCCC-CCCCCCcHHHHHHhcCCHHHHHHH
Q psy5702 5 SLGDTVEDVGAEVRSWVI-NKHHGETPLHRAARLGYIDAVAYCLEKFS--HGPAP-KDNAGYTPLHEAASHGWLDIARLL 80 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~d~~g~~~L~~A~~~~~~~~v~~li~~~~--~~~~~-~~~~g~t~L~~A~~~~~~~~v~~L 80 (235)
+..+.++.++..+.+... +|..|.||||+|+..|+.+++++|++. + .+.+. .+..|.||||+|+..|+.+++++|
T Consensus 13 g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 91 (228)
T 2dzn_A 13 NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK-MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91 (228)
T ss_dssp TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-CTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 345777888887776654 788899999999999999999998887 4 33344 778889999999999999999999
Q ss_pred HhcC--CCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcC-CCCcchh
Q psy5702 81 LMYG--ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYG-ADPLLAS 141 (235)
Q Consensus 81 l~~g--~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g-~~~~~~~ 141 (235)
++.| ++++..+..|.||||+|+..++.+++++| |+|+|+..|+.+++++|++.| ++++..+
T Consensus 92 l~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d 171 (228)
T 2dzn_A 92 YDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQD 171 (228)
T ss_dssp HSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCC
T ss_pred HhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcC
Confidence 9888 88888888899999999988888888887 888888888888999888888 8887777
Q ss_pred hhhhhccCCCchHHHHHhcCCHHHHHHHH-HCCCCCCCccccCCChhhhccchhhHHHHHH
Q psy5702 142 YAVYFLSLPSRPLHDAAEKGCVEMVRLLL-SYGADPLLASYAGHTPLSITSDETTRKLLQY 201 (235)
Q Consensus 142 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~ 201 (235)
..|+||||+|+..++.+++++|+ ++|++++.+|..|+||+++|.+.+..+++..
T Consensus 172 ------~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~ 226 (228)
T 2dzn_A 172 ------KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFFLN 226 (228)
T ss_dssp ------TTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHHHHHHT
T ss_pred ------CCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHHHHHHh
Confidence 78888999999988889988888 7888888888888899998888776666543
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.1e-35 Score=227.79 Aligned_cols=183 Identities=28% Similarity=0.251 Sum_probs=160.1
Q ss_pred chHHHHHHHhhhhce---eEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHH
Q psy5702 5 SLGDTVEDVGAEVRS---WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLL 81 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~---~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 81 (235)
+..++++.++..+.+ ++.+|..|+||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+
T Consensus 20 g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 98 (282)
T 1oy3_D 20 QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA-GAGVLVAERGGHTALHLACRVRAHTCACVLL 98 (282)
T ss_dssp TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHS
T ss_pred CCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCcchhHhhh
Confidence 456889999998887 889999999999999999999999999998 8899999999999999999999999999999
Q ss_pred hcCCC-----------------------------------------------CCCCCCCCCcHHHHHHHhCChhHHHHh-
Q psy5702 82 MYGAD-----------------------------------------------PSDSAIGGIRPLHDAAEKGCVEMVRLL- 113 (235)
Q Consensus 82 ~~g~~-----------------------------------------------~~~~~~~g~t~l~~a~~~~~~~~~~~l- 113 (235)
+.|++ ++..+..|.||||+|+..++.+++++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 178 (282)
T 1oy3_D 99 QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR 178 (282)
T ss_dssp SSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 98765 677888999999999999999999998
Q ss_pred ----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCC
Q psy5702 114 ----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPL 177 (235)
Q Consensus 114 ----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 177 (235)
|||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++
T Consensus 179 ~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 179 DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM------YGGRTPLGSALLRPNPILARLLRAHGAPEP 252 (282)
T ss_dssp HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHTSSCHHHHHHHHHTTCCCC
T ss_pred HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc------cCCCCHHHHHHHcCCcHHHHHHHHcCCCcC
Confidence 9999999999999999999999999988 799999999999999999999999999999
Q ss_pred CccccCCChhhhccchh
Q psy5702 178 LASYAGHTPLSITSDET 194 (235)
Q Consensus 178 ~~~~~g~t~l~~a~~~~ 194 (235)
.+|..|.||+++|....
T Consensus 253 ~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 253 EDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CCC--------------
T ss_pred cCCCcccccccccCCcc
Confidence 99999999999998654
No 22
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-34 Score=223.38 Aligned_cols=195 Identities=29% Similarity=0.285 Sum_probs=183.5
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+.+.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|
T Consensus 50 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 128 (285)
T 1wdy_A 50 SREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhC
Confidence 456899999999999999999999999999999999999999998 8889999999999999999999999999999999
Q ss_pred CCCCCC----------CCCCCcHHHHHHHhCChhHHHHh-----------------HHHHHHHcCC----HHHHHHHHHc
Q psy5702 85 ADPSDS----------AIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKGC----VEMVRLLLSY 133 (235)
Q Consensus 85 ~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~l-----------------~l~~a~~~~~----~~~~~~l~~~ 133 (235)
++++.. +..|.||||+|+..++.+++++| |+|.|+..+. .+++++|+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~ 208 (285)
T 1wdy_A 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208 (285)
T ss_dssp CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence 999887 77899999999999999999988 8999999999 9999999999
Q ss_pred CCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHH-CCCCCCCccccCCChhhhccchhhHHHHHHhhccc
Q psy5702 134 GADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLS-YGADPLLASYAGHTPLSITSDETTRKLLQYHLADV 206 (235)
Q Consensus 134 g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~ 206 (235)
|++++..+ ..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..+..++++.++...
T Consensus 209 g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 209 GADVNVRG------ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp TCCSSCCC------TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred CCCCCCcC------CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 99999888 789999999999999999999999 89999999999999999999988888887776653
No 23
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.6e-36 Score=227.64 Aligned_cols=180 Identities=29% Similarity=0.313 Sum_probs=162.5
Q ss_pred eecCCCCcHHHHHHHcCCHHHHHHHHHhCC---CCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy5702 22 INKHHGETPLHRAARLGYIDAVAYCLEKFS---HGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPL 98 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~~~~~~v~~li~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 98 (235)
..|..|.||||+|+..|+.+++++|++... ..++..+..|.||||+|+..|+.+++++|++.|++++.++..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 468899999999999999999999988633 26788999999999999999999999999999999999999999999
Q ss_pred HHHHHhCChhHHHHh----------------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhcc-CCCchHH
Q psy5702 99 HDAAEKGCVEMVRLL----------------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS-LPSRPLH 155 (235)
Q Consensus 99 ~~a~~~~~~~~~~~l----------------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~-~~~t~L~ 155 (235)
|+|+..++.+++++| |||+|+..|+.+++++|+++|++++..+ . .|.||||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------~~~g~tpL~ 156 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQE------PCNGRTALH 156 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC------TTTCCCHHH
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC------CCCCCCHHH
Confidence 999999999999887 8999999999999999999999999887 5 8999999
Q ss_pred HHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcccc
Q psy5702 156 DAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVR 207 (235)
Q Consensus 156 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~ 207 (235)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.++....
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 9999999999999999999999999999999999999999999988877644
No 24
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.5e-34 Score=213.82 Aligned_cols=175 Identities=25% Similarity=0.262 Sum_probs=164.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy5702 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEK 104 (235)
Q Consensus 25 ~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 104 (235)
..+.+|||.|+..|+.+.++.|+...+.+++..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 56889999999999999999999987778899999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHh-----------------HHHHHHHcCCHHHHHHHHHcC-CCCcchhhhhhhccCCCchHHHHHhcCC----
Q psy5702 105 GCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLSYG-ADPLLASYAVYFLSLPSRPLHDAAEKGC---- 162 (235)
Q Consensus 105 ~~~~~~~~l-----------------~l~~a~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~~~~t~L~~A~~~~~---- 162 (235)
++.+++++| |+|.|+..|+.+++++|+++| .+++..+ ..|.||||+|+..+.
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQN------DFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCC------TTSCCHHHHHHHSSCCSHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCC------CCCCCHHHHHHHhccchhh
Confidence 999999988 899999999999999999999 8888888 789999999999998
Q ss_pred -HHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 163 -VEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 163 -~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.+++++|+++|++++.+|..|.||||+|+..+..++++.++..
T Consensus 157 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 9999999999999999999999999999999999999988753
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.4e-35 Score=222.03 Aligned_cols=199 Identities=28% Similarity=0.302 Sum_probs=178.8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy5702 24 KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAE 103 (235)
Q Consensus 24 d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~ 103 (235)
+..+.+|||.|++.|+.+.++++++..+...+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 45788999999999999999999998677778889999999999999999999999999999999999999999999999
Q ss_pred hCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHH
Q psy5702 104 KGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVR 167 (235)
Q Consensus 104 ~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~ 167 (235)
.++.+++++| |+|.|+..++.+++++|+++|++++..+ ..|.||||+|+..|+.++++
T Consensus 83 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD------HYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHH
T ss_pred cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC------CCCCcHHHHHHHcCCHHHHH
Confidence 9999999998 8999999999999999999999998887 78999999999999999999
Q ss_pred HHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccC
Q psy5702 168 LLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGY 230 (235)
Q Consensus 168 ~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 230 (235)
+|+++|++++.+|..|.||||+|+..+..+++++++.. +.+....+..|.+++..+...|.
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ--GASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHSCHHHH
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHhhHH
Confidence 99999999999999999999999999999999988876 33333344455666665554443
No 26
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.2e-35 Score=237.83 Aligned_cols=192 Identities=22% Similarity=0.218 Sum_probs=177.0
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc-
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY- 83 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~- 83 (235)
+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.. ..+..|.||||+|+..|+.+++++|++.
T Consensus 31 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 107 (364)
T 3ljn_A 31 GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASV-GEV--HSLWHGQKPIHLAVMANKTDLVVALVEGA 107 (364)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHH-CCC--CCCBTTBCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCC--ccccCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 456889999999999999999999999999999999999999998 553 3445899999999999999999999998
Q ss_pred ---CCCCCC-----------------CCCCCCcHHHHHHHhC--ChhHHHHh----------------HHHHHHHcCCHH
Q psy5702 84 ---GADPSD-----------------SAIGGIRPLHDAAEKG--CVEMVRLL----------------PLHDAAEKGCVE 125 (235)
Q Consensus 84 ---g~~~~~-----------------~~~~g~t~l~~a~~~~--~~~~~~~l----------------~l~~a~~~~~~~ 125 (235)
|++++. .+..|.||||+|+..+ +.+++++| |||+|+..|+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 108 KERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE 187 (364)
T ss_dssp HHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 887776 8888999999999999 99999998 999999999999
Q ss_pred HHHHHHHcCCC-----CcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHH
Q psy5702 126 MVRLLLSYGAD-----PLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQ 200 (235)
Q Consensus 126 ~~~~l~~~g~~-----~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~ 200 (235)
++++|+++|++ ++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++
T Consensus 188 ~v~~Ll~~g~~~~~~~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~ 261 (364)
T 3ljn_A 188 ALDLMMDTVPSKSSLRLDYAN------KQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTK 261 (364)
T ss_dssp HHHHHHHHCSCSSSCCTTCCC------TTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHH
T ss_pred HHHHHHhcccccccccccccC------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHH
Confidence 99999999988 77777 78999999999999999999999999999999999999999999999999998
Q ss_pred Hhhcc
Q psy5702 201 YHLAD 205 (235)
Q Consensus 201 ~~~~~ 205 (235)
.++..
T Consensus 262 ~Ll~~ 266 (364)
T 3ljn_A 262 ELLQK 266 (364)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 88876
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2e-34 Score=219.11 Aligned_cols=179 Identities=29% Similarity=0.286 Sum_probs=136.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCC-----CCCCCCCCcHHHH
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADP-----SDSAIGGIRPLHD 100 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~~~~~~g~t~l~~ 100 (235)
.|+||||+|++.|+.+++++|++..+.+++..|..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 35666666666666666666666555666666666666666666666666666666666654 4455566666666
Q ss_pred HHHhCChhHHHHh-----------------------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCC
Q psy5702 101 AAEKGCVEMVRLL-----------------------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPS 151 (235)
Q Consensus 101 a~~~~~~~~~~~l-----------------------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 151 (235)
|+..++.+++++| |+|+|+..|+.+++++|+++|++++..+ ..|+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d------~~g~ 155 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQD------SLGN 155 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCC------TTSC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC------CCCC
Confidence 6666666666655 5666777788888999999999999888 7899
Q ss_pred chHHHHHhcCCHHHH----HHHHHCCCCC------CCccccCCChhhhccchhhHHHHHHhhccccCCC
Q psy5702 152 RPLHDAAEKGCVEMV----RLLLSYGADP------LLASYAGHTPLSITSDETTRKLLQYHLADVRGHE 210 (235)
Q Consensus 152 t~L~~A~~~~~~~~v----~~Ll~~ga~~------~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~ 210 (235)
||||+|+..++.+++ ++|+++|+++ +.+|..|.||||+|+..+..++++.++.......
T Consensus 156 t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 156 TVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp CHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 999999999999988 9999999988 5889999999999999999999999887755443
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6e-34 Score=215.73 Aligned_cols=195 Identities=26% Similarity=0.258 Sum_probs=169.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC--CCCCC-CCCCCCcHHHHHH
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG--ADPSD-SAIGGIRPLHDAA 102 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~-~~~~g~t~l~~a~ 102 (235)
.|.||||+|++.|+.+++++|++.+....+..+..|.||||+|+..|+.+++++|++.| .+++. .+..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 1 MSNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp --CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 37899999999999999999999966666678999999999999999999999999999 55555 7789999999999
Q ss_pred HhCChhHHHHh------------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHH
Q psy5702 103 EKGCVEMVRLL------------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVE 164 (235)
Q Consensus 103 ~~~~~~~~~~l------------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 164 (235)
..++.+++++| |+|.|+..++.+++++|+++|++++..+ ..|.||||+|+..|+.+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKD------KFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC------TTSCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCHH
Confidence 99999999988 8999999999999999999999999888 78999999999999999
Q ss_pred HHHHHHHCC-CCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCccccccc
Q psy5702 165 MVRLLLSYG-ADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQM 227 (235)
Q Consensus 165 ~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (235)
++++|+++| ++++.+|..|.||||+|+..+..++++.++... +.+....+..|.+++..+..
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~-ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY-GAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH-CCCSCCBCTTSCBGGGGCSS
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-CCCCCccCCCCCcHHHHHHH
Confidence 999999999 999999999999999999999999988887222 22333334445555555543
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-34 Score=234.63 Aligned_cols=193 Identities=20% Similarity=0.191 Sum_probs=179.0
Q ss_pred HHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC---C
Q psy5702 9 TVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG---A 85 (235)
Q Consensus 9 ~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~ 85 (235)
.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.+ +
T Consensus 148 ~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 148 EAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp HHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred HHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 34556689999999999999999999999999999999998 8899999999999999999999999999999988 8
Q ss_pred CCCCCCCCCCcHHHHHHHhC---ChhHHHHh------------------------HHHHHHHcCCHHHHHHHHHcC-CCC
Q psy5702 86 DPSDSAIGGIRPLHDAAEKG---CVEMVRLL------------------------PLHDAAEKGCVEMVRLLLSYG-ADP 137 (235)
Q Consensus 86 ~~~~~~~~g~t~l~~a~~~~---~~~~~~~l------------------------~l~~a~~~~~~~~~~~l~~~g-~~~ 137 (235)
+++..+..|.||||+|+..+ +.+++++| |||.|+..|+.+++++|++.+ +++
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc
Confidence 99999999999999999987 77888876 799999999999999999886 899
Q ss_pred cchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccC
Q psy5702 138 LLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRG 208 (235)
Q Consensus 138 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~ 208 (235)
+..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..++++++......
T Consensus 307 n~~d------~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 307 DKQD------EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp TCCC------TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred cCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 8888 7899999999999999999999999999999999999999999999999999998876443
No 30
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.6e-34 Score=206.80 Aligned_cols=153 Identities=37% Similarity=0.508 Sum_probs=141.3
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChh
Q psy5702 29 TPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVE 108 (235)
Q Consensus 29 ~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~ 108 (235)
.+|+.||+.|+.++|+.|++. |++++.+|..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g--- 81 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG--- 81 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcC---
Confidence 369999999999999999998 8999999999999999999999999999999999999999999999999977764
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhh
Q psy5702 109 MVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLS 188 (235)
Q Consensus 109 ~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 188 (235)
+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 82 --------------~~~~v~~Ll~~gadvn~~d------~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 82 --------------HKEVVKLLISKGADVNAKD------SDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLD 141 (169)
T ss_dssp --------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred --------------CHHHHHHHHHCcCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 5566788899999999888 78999999999999999999999999999999999999999
Q ss_pred hccchhhHHHHHHhhcc
Q psy5702 189 ITSDETTRKLLQYHLAD 205 (235)
Q Consensus 189 ~a~~~~~~~~l~~~~~~ 205 (235)
+|+..+..++++.++..
T Consensus 142 ~A~~~g~~~iv~~Ll~~ 158 (169)
T 4gpm_A 142 LAREHGNEEVVKLLEKQ 158 (169)
T ss_dssp HHHHTTCHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 99998888888777654
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=217.22 Aligned_cols=201 Identities=26% Similarity=0.262 Sum_probs=181.3
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
.+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+..|+.+++++|++.
T Consensus 19 ~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ 98 (240)
T 3eu9_A 19 YGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY 98 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred cCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc
Confidence 34578899999999999999999999999999999999999999984444445556699999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCC-HHHHHHHHHcCCCCcchhhhhhh
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGC-VEMVRLLLSYGADPLLASYAVYF 146 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~-~~~~~~l~~~g~~~~~~~~~~~~ 146 (235)
|++++..+..|.||||+|+..++.+++++| |++.|+..+. .+++++|++.|++++..+.
T Consensus 99 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~---- 174 (240)
T 3eu9_A 99 GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK---- 174 (240)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCT----
T ss_pred CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhc----
Confidence 999999999999999999999999999998 8999996665 8899999999999988772
Q ss_pred ccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCC
Q psy5702 147 LSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGH 209 (235)
Q Consensus 147 ~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~ 209 (235)
..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++++++......+
T Consensus 175 -~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 175 -YHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp -TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred -cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 38999999999999999999999999999999999999999999999999999988765443
No 32
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.4e-34 Score=234.13 Aligned_cols=206 Identities=23% Similarity=0.240 Sum_probs=181.8
Q ss_pred ceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcH
Q psy5702 18 RSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRP 97 (235)
Q Consensus 18 ~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 97 (235)
.+.+..|..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|.||
T Consensus 11 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~ 87 (364)
T 3ljn_A 11 LNRIKSDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKP 87 (364)
T ss_dssp -----CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCH
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCH
Confidence 44556788999999999999999999999998 889999999999999999999999999999999996654 568999
Q ss_pred HHHHHHhCChhHHHHh-------------------------------------HHHHHHHcC--CHHHHHHHHHcCCCCc
Q psy5702 98 LHDAAEKGCVEMVRLL-------------------------------------PLHDAAEKG--CVEMVRLLLSYGADPL 138 (235)
Q Consensus 98 l~~a~~~~~~~~~~~l-------------------------------------~l~~a~~~~--~~~~~~~l~~~g~~~~ 138 (235)
||+|+..++.+++++| |||+|+..| +.+++++|+++|++++
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~ 167 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT 167 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence 9999999999998876 799999999 9999999999999999
Q ss_pred chhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCC-----CCCccccCCChhhhccchhhHHHHHHhhccccCCCCCc
Q psy5702 139 LASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGAD-----PLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPK 213 (235)
Q Consensus 139 ~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~ 213 (235)
..+ ..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..+..++++.++.. +.+...
T Consensus 168 ~~d------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--gad~~~ 239 (364)
T 3ljn_A 168 AKD------KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM--GIDVNM 239 (364)
T ss_dssp CCC------TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT--TCCTTC
T ss_pred ccC------CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCC
Confidence 888 7899999999999999999999999999 999999999999999999999999998876 334445
Q ss_pred ccccCCCcccccccccCCCCC
Q psy5702 214 WDFAGPASCFDKQMVGYEPLA 234 (235)
Q Consensus 214 ~~~~~~~~~~~~~~~g~~~~~ 234 (235)
.+..|.+++..+...|+..++
T Consensus 240 ~d~~g~tpL~~A~~~g~~~~v 260 (364)
T 3ljn_A 240 EDNEHTVPLYLSVRAAMVLLT 260 (364)
T ss_dssp CCTTSCCHHHHHHHTCCHHHH
T ss_pred CCCCCCCHHHHHHHhChHHHH
Confidence 556677788877777765543
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.7e-34 Score=225.17 Aligned_cols=191 Identities=20% Similarity=0.168 Sum_probs=171.4
Q ss_pred hHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCC
Q psy5702 6 LGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGA 85 (235)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 85 (235)
..++.+.+... +++.+|..|.||||+|+..|+.+++++|++. +.+++.. +|.||||+|+..|+.+++++|++.|+
T Consensus 12 ~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 12 SKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp HHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 34444444443 5788999999999999999999999999998 7777766 49999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHhCChhHHHHh-----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhcc
Q psy5702 86 DPSDSAIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS 148 (235)
Q Consensus 86 ~~~~~~~~g~t~l~~a~~~~~~~~~~~l-----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 148 (235)
+++.++..|.||||+|+..++.+++++| |+|+|+..|+.+++++|+++|++.... .
T Consensus 87 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-------~ 159 (285)
T 3kea_A 87 DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-------A 159 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-------S
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-------c
Confidence 9999999999999999999999999988 899999999999999999999876322 2
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCCh-hhhccchhhHHHHHHhhccccC
Q psy5702 149 LPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTP-LSITSDETTRKLLQYHLADVRG 208 (235)
Q Consensus 149 ~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~-l~~a~~~~~~~~l~~~~~~~~~ 208 (235)
.|.||||+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..+..++++.++...-.
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 68899999999999999999999999999999999998 9999999999999988776433
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.1e-35 Score=236.32 Aligned_cols=215 Identities=20% Similarity=0.150 Sum_probs=186.2
Q ss_pred ceeEeec-CCCCcHHHHHHHcCCHHHHHHHHH-------hCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCC
Q psy5702 18 RSWVINK-HHGETPLHRAARLGYIDAVAYCLE-------KFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSD 89 (235)
Q Consensus 18 ~~~~~~d-~~g~~~L~~A~~~~~~~~v~~li~-------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 89 (235)
.+++.+| ..|+||||+|+..|+.+++++|+. ..+.+++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 115 ~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~ 194 (373)
T 2fo1_E 115 ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI 194 (373)
T ss_dssp TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc
Confidence 3556677 799999999999999888887763 34899999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHhCChhHHHHh-------------------HHHHHHHcC---CHHHHHHHHHcCCCCcchhhh--hh
Q psy5702 90 SAIGGIRPLHDAAEKGCVEMVRLL-------------------PLHDAAEKG---CVEMVRLLLSYGADPLLASYA--VY 145 (235)
Q Consensus 90 ~~~~g~t~l~~a~~~~~~~~~~~l-------------------~l~~a~~~~---~~~~~~~l~~~g~~~~~~~~~--~~ 145 (235)
.+..|.||||+|+..++.+++++| |+|+|+..+ +.+++++|+++|++++..... ..
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 999999999999999999999987 899999988 899999999999998763210 11
Q ss_pred hccCCCchHHHHHhcCCHHHHHHHHHCC-CCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccc
Q psy5702 146 FLSLPSRPLHDAAEKGCVEMVRLLLSYG-ADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFD 224 (235)
Q Consensus 146 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (235)
.+..|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+..+..++++.++.. +.+....+..|.+++..
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~--gad~~~~d~~g~t~l~~ 352 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ--GASVEAVDATDHTARQL 352 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCSSSCCHHHH
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccCCCCCCCCHHHH
Confidence 1258999999999999999999999875 99999999999999999999999999998876 33444455667888888
Q ss_pred cccccCCCCC
Q psy5702 225 KQMVGYEPLA 234 (235)
Q Consensus 225 ~~~~g~~~~~ 234 (235)
+...|+..++
T Consensus 353 A~~~g~~~iv 362 (373)
T 2fo1_E 353 AQANNHHNIV 362 (373)
T ss_dssp HHHTTCHHHH
T ss_pred HHHcCCHHHH
Confidence 8888876554
No 35
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=223.32 Aligned_cols=200 Identities=24% Similarity=0.228 Sum_probs=149.9
Q ss_pred eecCCCCcHHHHHHHcCCHHHHHHHHHhCCC-------CCCCCCCCCCcHHHHHHhcCCH-HHHHHHHhcCCCCCCCCCC
Q psy5702 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSH-------GPAPKDNAGYTPLHEAASHGWL-DIARLLLMYGADPSDSAIG 93 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~-------~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~ 93 (235)
-+|..+.++|+.|+..|+.++|++|++.... .++..+..|.|||+.|+..+.. .++++|++.|++++.+|..
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 3677788999999999999999999987332 2456678899999999998876 5889999999999999999
Q ss_pred CCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHH
Q psy5702 94 GIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDA 157 (235)
Q Consensus 94 g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A 157 (235)
|.||||+|+..|+.+++++| |++.|+..++.+++++|++.|++++..+ ..|+||||+|
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d------~~g~TpL~~A 159 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD------LSGNTPLIYA 159 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC------TTCCCHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCC------CCCCCHHHHH
Confidence 99999999999999999998 8999999999999999999999999888 7999999999
Q ss_pred HhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCccccccccc
Q psy5702 158 AEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVG 229 (235)
Q Consensus 158 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 229 (235)
+..|+.+++++|+++|++++.++..|.||||+|+..+..++++.++.. +.+....+..|.+++..+...|
T Consensus 160 ~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~--Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 160 CSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLH--GASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCSGGGSCTTC
T ss_pred HHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHhCC
Confidence 999999999999999999999999999999999999999999888765 3333444555666776665544
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.5e-33 Score=200.73 Aligned_cols=151 Identities=36% Similarity=0.446 Sum_probs=136.7
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
.+-.+.|+.|+..|.+++.+|..|+||||+|+..++.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.
T Consensus 14 ~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 92 (169)
T 4gpm_A 14 NGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 92 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4567899999999999999999999999999999999999999998 899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
|++++.+|..|.||||+|+..+ +.+++++|+++|++++..+ ..|+||||+|++.|+.
T Consensus 93 gadvn~~d~~G~TpLh~A~~~g-----------------~~~~v~~Ll~~gad~~~~d------~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 93 GADVNAKDSDGRTPLHHAAENG-----------------HKEVVKLLISKGADVNTSD------SDGRTPLDLAREHGNE 149 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCH
T ss_pred cCCCCCCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCH
Confidence 9999999999999999987765 5566788899999999888 8999999999999999
Q ss_pred HHHHHHHHCCCCCCC
Q psy5702 164 EMVRLLLSYGADPLL 178 (235)
Q Consensus 164 ~~v~~Ll~~ga~~~~ 178 (235)
+++++|+++||+++.
T Consensus 150 ~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 150 EVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHHTC------
T ss_pred HHHHHHHHCCCCcCC
Confidence 999999999999864
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.1e-32 Score=219.54 Aligned_cols=182 Identities=31% Similarity=0.387 Sum_probs=168.6
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..++++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|
T Consensus 69 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 147 (351)
T 3utm_A 69 NRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 147 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 456899999999999999999999999999999999999999998 8889999999999999999999999999999999
Q ss_pred CCCCCCC------------------------------------------------------CCCCcHHHHHHHh---CCh
Q psy5702 85 ADPSDSA------------------------------------------------------IGGIRPLHDAAEK---GCV 107 (235)
Q Consensus 85 ~~~~~~~------------------------------------------------------~~g~t~l~~a~~~---~~~ 107 (235)
++++..+ ..|.||||+|+.. +..
T Consensus 148 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 227 (351)
T 3utm_A 148 ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227 (351)
T ss_dssp CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH
T ss_pred CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH
Confidence 9987654 4567899999988 446
Q ss_pred hHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHH
Q psy5702 108 EMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLS 171 (235)
Q Consensus 108 ~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~ 171 (235)
+++++| |+|.|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|++
T Consensus 228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d------~~g~t~L~~A~~~~~~~~v~~Ll~ 301 (351)
T 3utm_A 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD------SLGQTALHRAALAGHLQTCRLLLS 301 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHcCcHHHHHHHHH
Confidence 777777 9999999999999999999999999888 799999999999999999999999
Q ss_pred CCCCCCCccccCCChhhhccch
Q psy5702 172 YGADPLLASYAGHTPLSITSDE 193 (235)
Q Consensus 172 ~ga~~~~~~~~g~t~l~~a~~~ 193 (235)
+|++++.+|..|.||+++|...
T Consensus 302 ~gad~~~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 302 YGSDPSIISLQGFTAAQMGNEA 323 (351)
T ss_dssp TTCCTTCCCTTSCCHHHHSCHH
T ss_pred cCCCCCCcCCCCCChhhhhhHH
Confidence 9999999999999999999543
No 38
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.1e-32 Score=220.63 Aligned_cols=216 Identities=25% Similarity=0.237 Sum_probs=168.0
Q ss_pred cchHHHHHHHhhhhceeEeecC-CCCcHHHHHHHcCCHHHHHHHHHhCCCC-----------------------------
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKH-HGETPLHRAARLGYIDAVAYCLEKFSHG----------------------------- 53 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~-~g~~~L~~A~~~~~~~~v~~li~~~~~~----------------------------- 53 (235)
.+-.+.|+.|++.|.+++.++. .|+||||+|+..|+.+++++|+++ ++.
T Consensus 35 ~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (337)
T 4g8k_A 35 NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFILAAIAGSVKLLKLFLS 113 (337)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCchhhhccCCCchhHHHHhcccchhhHHhhh
Confidence 3456899999999999998875 499999999999999999999987 544
Q ss_pred ----CCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCC----------CCCCCcHHHHHHHhCChhHHHHh------
Q psy5702 54 ----PAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDS----------AIGGIRPLHDAAEKGCVEMVRLL------ 113 (235)
Q Consensus 54 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~l------ 113 (235)
++..|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|
T Consensus 114 ~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~ga 193 (337)
T 4g8k_A 114 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 193 (337)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCC
T ss_pred ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Confidence 3455677888888888888888888888888877643 33577888888888888888876
Q ss_pred -----------HHHHHHHcCC----HHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHC-CCCCC
Q psy5702 114 -----------PLHDAAEKGC----VEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSY-GADPL 177 (235)
Q Consensus 114 -----------~l~~a~~~~~----~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-ga~~~ 177 (235)
+++.++..+. .+++++|+++|++++..+ ..|+||||+|+..++.+++++|++. |++++
T Consensus 194 d~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d------~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn 267 (337)
T 4g8k_A 194 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG------ERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 267 (337)
T ss_dssp CTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCC------GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT
T ss_pred CcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHhhhhHHHHHHHHhcCCccc
Confidence 4555444332 357788888888888777 6889999999999999999999984 89999
Q ss_pred CccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCC
Q psy5702 178 LASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPL 233 (235)
Q Consensus 178 ~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 233 (235)
.+|..|+||||+|+..+..++++.++...-..+ ..+++..+...|+.++
T Consensus 268 ~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n-------~~~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 268 DTDSDGKTALLLAVELKLKKIAELLCKRGASTD-------CGDLVMTARRNYDHSL 316 (337)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST-------TCCHHHHHHHTTCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------CCCHHHHHHHcCCHHH
Confidence 999999999999999888888888876532221 2235666666665544
No 39
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=6.4e-33 Score=205.01 Aligned_cols=162 Identities=27% Similarity=0.229 Sum_probs=150.9
Q ss_pred eEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy5702 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLH 99 (235)
Q Consensus 20 ~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 99 (235)
++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 456899999999999999999999999998 7788999999999999999999999999999999999999999999999
Q ss_pred HHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCc
Q psy5702 100 DAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLA 179 (235)
Q Consensus 100 ~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 179 (235)
+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+
T Consensus 107 ~A~~~~-----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 163 (192)
T 2rfm_A 107 WSIIFG-----------------YSEMSYFLLEHGANVNDRN------LEGETPLIVASKYGRSEIVKKLLELGADISAR 163 (192)
T ss_dssp HHHHHT-----------------CHHHHHHHHHTTCCSSCCC------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB
T ss_pred HHHHcC-----------------CHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 988765 4566788899999999888 78999999999999999999999999999999
Q ss_pred cccCCChhhhccchhhHHHHHHhhcc
Q psy5702 180 SYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 180 ~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
|..|.||+++|+..+..++++.+...
T Consensus 164 ~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 164 DLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 99999999999999999999988754
No 40
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-32 Score=215.86 Aligned_cols=200 Identities=24% Similarity=0.283 Sum_probs=169.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy5702 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEK 104 (235)
Q Consensus 25 ~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 104 (235)
..|.||||.||..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 3567899999999999999999998 788999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHh----------------HHHHHHHcCCHHHHHHHHHc-CCCCcchhhh--------------------hhhc
Q psy5702 105 GCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSY-GADPLLASYA--------------------VYFL 147 (235)
Q Consensus 105 ~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~-g~~~~~~~~~--------------------~~~~ 147 (235)
++.+++++| |++.|+..+..++++.++.. +.+++..... ...+
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence 999999998 89999999999998887754 5554332110 0012
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCccccccc
Q psy5702 148 SLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQM 227 (235)
Q Consensus 148 ~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (235)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.++... .+....+..|.+++..+..
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL--CDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCTTTSCCS
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999998888763 2333334455555555543
No 41
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.1e-31 Score=194.11 Aligned_cols=156 Identities=28% Similarity=0.360 Sum_probs=145.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKG 105 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 105 (235)
.|.||||.|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 588999999999999999999999 7889999999999999999999999999999999999999999999999988765
Q ss_pred ChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCC
Q psy5702 106 CVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHT 185 (235)
Q Consensus 106 ~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 185 (235)
+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.|
T Consensus 81 -----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 137 (167)
T 3v31_A 81 -----------------YTDIVKMLLDCGVDVNEYD------WNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN 137 (167)
T ss_dssp -----------------CHHHHHHHHHHTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred -----------------CHHHHHHHHHCCCCCCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 4566788899999999887 78999999999999999999999999999999999999
Q ss_pred hhhhccchhhHHHHHHhhcc
Q psy5702 186 PLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 186 ~l~~a~~~~~~~~l~~~~~~ 205 (235)
|+++|+..+..++++.+...
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 138 SMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHH
Confidence 99999999888888877654
No 42
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.8e-32 Score=214.82 Aligned_cols=186 Identities=20% Similarity=0.160 Sum_probs=170.5
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
.+..+.++.++..+.+++.+| |.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.
T Consensus 41 ~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 117 (285)
T 3kea_A 41 DNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFS-GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK 117 (285)
T ss_dssp TTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 345788999999999988774 99999999999999999999998 889999999999999999999999999999999
Q ss_pred CCCCCCCCCCC-CcHHHHHHHhCChhHHHHh---------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhc
Q psy5702 84 GADPSDSAIGG-IRPLHDAAEKGCVEMVRLL---------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFL 147 (235)
Q Consensus 84 g~~~~~~~~~g-~t~l~~a~~~~~~~~~~~l---------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 147 (235)
|++++.++..| .||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+
T Consensus 118 ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~------ 191 (285)
T 3kea_A 118 NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN------ 191 (285)
T ss_dssp CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTC------
T ss_pred CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCccc------
Confidence 99999999999 8999999999999999988 9999999999999999999999999888
Q ss_pred cCCCch-HHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 148 SLPSRP-LHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 148 ~~~~t~-L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
..|.|| ||+|+..++.+++++|+++|++++..|. .|+..+..++++.++..
T Consensus 192 ~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~ 243 (285)
T 3kea_A 192 SLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEK 243 (285)
T ss_dssp CCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHc
Confidence 789998 9999999999999999999999999884 45556667777766554
No 43
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.3e-31 Score=193.71 Aligned_cols=162 Identities=25% Similarity=0.257 Sum_probs=145.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy5702 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEK 104 (235)
Q Consensus 25 ~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 104 (235)
..+.++||.|+..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 56789999999999999999999998888999999999999999999999999999999999999999999999998776
Q ss_pred CChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCC
Q psy5702 105 GCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGH 184 (235)
Q Consensus 105 ~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 184 (235)
+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 83 ~-----------------~~~~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 139 (179)
T 3f6q_A 83 G-----------------HRDIVQKLLQYKADINAVN------EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGE 139 (179)
T ss_dssp T-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSC
T ss_pred C-----------------CHHHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCC
Confidence 5 4566788899999999888 7999999999999999999999999999999999999
Q ss_pred ChhhhccchhhHHHHHHhhccccCC
Q psy5702 185 TPLSITSDETTRKLLQYHLADVRGH 209 (235)
Q Consensus 185 t~l~~a~~~~~~~~l~~~~~~~~~~ 209 (235)
||+++|+..+..++++.+.......
T Consensus 140 tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 140 MPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred CcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 9999999988888887776654433
No 44
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=1.1e-31 Score=193.58 Aligned_cols=160 Identities=32% Similarity=0.420 Sum_probs=144.8
Q ss_pred eecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy5702 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDA 101 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 101 (235)
+.|..|.++||.|++.|+.+++++|++..+...+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 35778899999999999999999999977778888889999999999999999999999999999999999999999998
Q ss_pred HHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccc
Q psy5702 102 AEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASY 181 (235)
Q Consensus 102 ~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 181 (235)
+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|.
T Consensus 83 ~~~~-----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 83 CSYG-----------------HYEVAELLVKHGAVVNVAD------LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HHTT-----------------CHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcC-----------------cHHHHHHHHhCCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 7765 5566788899999999888 7899999999999999999999999999999999
Q ss_pred cCCChhhhccchhhHHHHHHhhcc
Q psy5702 182 AGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 182 ~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.|.||+|+|.. +..++++.+...
T Consensus 140 ~g~t~l~~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 140 DGNTPLDLVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp TSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred CCCChhHhHhc-CChHHHHHHhhc
Confidence 99999999887 677888887654
No 45
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.98 E-value=5.8e-32 Score=205.93 Aligned_cols=203 Identities=21% Similarity=0.184 Sum_probs=180.0
Q ss_pred eecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHH
Q psy5702 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSA-IGGIRPLHD 100 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~ 100 (235)
..|..|.++|+.|++.|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++... ..|.||||+
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 3577899999999999999999999998 78899999999999999999999999999999999987654 459999999
Q ss_pred HHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCC-H
Q psy5702 101 AAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGC-V 163 (235)
Q Consensus 101 a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~-~ 163 (235)
|+..++.+++++| |++.|+..|+.+++++|+++|++++..+ ..|.||||+|+..+. .
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~------~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD------QNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHCCSS
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC------CCCCcHHHHHHHhCChH
Confidence 9999999999998 8999999999999999999999998887 789999999997666 8
Q ss_pred HHHHHHHHCCCCCCCccc-cCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCC
Q psy5702 164 EMVRLLLSYGADPLLASY-AGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPL 233 (235)
Q Consensus 164 ~~v~~Ll~~ga~~~~~~~-~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 233 (235)
+++++|++.|++++..+. .|.||||+|+..+..+++++++.. +.+....+..|.+++..+...|+..+
T Consensus 157 ~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~ 225 (240)
T 3eu9_A 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA--GANVDAQNIKGESALDLAKQRKNVWM 225 (240)
T ss_dssp TTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 999999999999999997 899999999999999999988876 34444445566777777777666544
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=2.4e-32 Score=218.02 Aligned_cols=174 Identities=21% Similarity=0.242 Sum_probs=151.2
Q ss_pred hHHHHHHHhhhhceeEe-ecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCC---HHHHHHHH
Q psy5702 6 LGDTVEDVGAEVRSWVI-NKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGW---LDIARLLL 81 (235)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll 81 (235)
..++++.+...+.+++. +|..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+..|+ .++++.|+
T Consensus 109 ~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 109 LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp HHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred HHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHH
Confidence 45778888899999999 899999999999999999999999998 89999999999999999999998 67888888
Q ss_pred hcC-CCCCCCCCCCCcHHHHHHH----hCChhHHHHh------------------------------------HHHHHHH
Q psy5702 82 MYG-ADPSDSAIGGIRPLHDAAE----KGCVEMVRLL------------------------------------PLHDAAE 120 (235)
Q Consensus 82 ~~g-~~~~~~~~~g~t~l~~a~~----~~~~~~~~~l------------------------------------~l~~a~~ 120 (235)
+.+ ++++.++..|.||||+|+. .++.++++++ |++.|+.
T Consensus 188 ~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~ 267 (327)
T 1sw6_A 188 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 267 (327)
T ss_dssp HHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS
T ss_pred HhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH
Confidence 875 7799999999999999998 7888888776 2333332
Q ss_pred cCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchh
Q psy5702 121 KGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDET 194 (235)
Q Consensus 121 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~ 194 (235)
+++|+++ +++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 268 ------~~~Ll~~--~~n~~d------~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 ------LKWIIAN--MLNAQD------SNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ------HHHHHHH--TTTCCC------TTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred ------HHHHHHh--CCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 6677776 455555 78999999999999999999999999999999999999999998753
No 47
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=2.4e-31 Score=192.76 Aligned_cols=160 Identities=34% Similarity=0.392 Sum_probs=145.1
Q ss_pred EeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy5702 21 VINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHD 100 (235)
Q Consensus 21 ~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 100 (235)
......+.++|+.|++.|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRL 86 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH
Confidence 34556678899999999999999999998 88899999999999999999999999999999999999999999999999
Q ss_pred HHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCcc
Q psy5702 101 AAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLAS 180 (235)
Q Consensus 101 a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 180 (235)
|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|
T Consensus 87 A~~~~-----------------~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 143 (169)
T 2y1l_E 87 AALFG-----------------HLEIVEVLLKNGADVNAND------MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD 143 (169)
T ss_dssp HHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcC-----------------CHHHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 77765 5566788899999998887 789999999999999999999999999999999
Q ss_pred ccCCChhhhccchhhHHHHHHhhc
Q psy5702 181 YAGHTPLSITSDETTRKLLQYHLA 204 (235)
Q Consensus 181 ~~g~t~l~~a~~~~~~~~l~~~~~ 204 (235)
..|.||+++|+..+..++++.+..
T Consensus 144 ~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 144 KFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999998765
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=8.8e-32 Score=209.91 Aligned_cols=178 Identities=23% Similarity=0.254 Sum_probs=159.3
Q ss_pred HHHHHHHhhhhce--eEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHH-----hcCCHHHHHH
Q psy5702 7 GDTVEDVGAEVRS--WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAA-----SHGWLDIARL 79 (235)
Q Consensus 7 ~~~~~~~~~~~~~--~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~ 79 (235)
.+.++.++..+.+ ++.+|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+ ..++.+++++
T Consensus 89 ~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~ 168 (276)
T 4hbd_A 89 LVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQ 168 (276)
T ss_dssp HHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHH
Confidence 3455556655555 77899999999999999999999999999955589999999999999999 6688999999
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHh
Q psy5702 80 LLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAE 159 (235)
Q Consensus 80 Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~ 159 (235)
|++.|.+++..+..|.||||+|+..+ +.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 169 Ll~~g~~~~~~~~~g~tpLh~A~~~g-----------------~~~~v~~Ll~~gad~n~~d------~~G~TpLh~A~~ 225 (276)
T 4hbd_A 169 LFRLGNINAKASQAGQTALMLAVSHG-----------------RVDVVKALLACEADVNVQD------DDGSTALMCACE 225 (276)
T ss_dssp HHHHSCTTCCCTTTCCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHH
T ss_pred HHHcCCCccccCCCCCCHHHHHHHcC-----------------CHHHHHHHHhCCCCCCCCC------CCCCCHHHHHHH
Confidence 99999999999999999999987765 5566788899999999988 899999999999
Q ss_pred cCCHHHHHHHHH-CCCCCCCccccCCChhhhccchhhHHHHHHhhcccc
Q psy5702 160 KGCVEMVRLLLS-YGADPLLASYAGHTPLSITSDETTRKLLQYHLADVR 207 (235)
Q Consensus 160 ~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~ 207 (235)
.|+.+++++|++ .|++++.+|..|.||||+|+..+..++++.++....
T Consensus 226 ~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 226 HGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 999999999999 899999999999999999999999999999887643
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=1.7e-32 Score=211.47 Aligned_cols=175 Identities=25% Similarity=0.219 Sum_probs=156.4
Q ss_pred HHHHHHhhhhceeEe----ecCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCCC-----------CCCCCCCcHHHHHH
Q psy5702 8 DTVEDVGAEVRSWVI----NKHHGETPLHRAARL---GYIDAVAYCLEKFSHGPA-----------PKDNAGYTPLHEAA 69 (235)
Q Consensus 8 ~~~~~~~~~~~~~~~----~d~~g~~~L~~A~~~---~~~~~v~~li~~~~~~~~-----------~~~~~g~t~L~~A~ 69 (235)
.+++.++..+.+++. +|..|.||||+|+.. |+.+++++|++. +.+.+ ..|..|.||||+|+
T Consensus 20 ~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 98 (256)
T 2etb_A 20 GLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLVNAQCTDEFYQGHSALHIAI 98 (256)
T ss_dssp THHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGGGCCCCSTTTTTCCHHHHHH
T ss_pred HHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhcccccccccccCCCHHHHHH
Confidence 577888889999998 899999999999999 999999999997 44433 23477999999999
Q ss_pred hcCCHHHHHHHHhcCCCCCCCCCC-------------CCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHH---c
Q psy5702 70 SHGWLDIARLLLMYGADPSDSAIG-------------GIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLS---Y 133 (235)
Q Consensus 70 ~~~~~~~v~~Ll~~g~~~~~~~~~-------------g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~---~ 133 (235)
..|+.+++++|++.|++++.++.. |.||||+|+..+ +.+++++|++ +
T Consensus 99 ~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~-----------------~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 99 EKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-----------------QWDVVTYLLENPHQ 161 (256)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT-----------------CHHHHHHHHHCSSC
T ss_pred HcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcC-----------------CHHHHHHHHhcccc
Confidence 999999999999999999999886 999999977764 5567788899 9
Q ss_pred CCCCcchhhhhhhccCCCchHHHHHh--cCCHH-------HHHHHHHCCCCC-------CCccccCCChhhhccchhhHH
Q psy5702 134 GADPLLASYAVYFLSLPSRPLHDAAE--KGCVE-------MVRLLLSYGADP-------LLASYAGHTPLSITSDETTRK 197 (235)
Q Consensus 134 g~~~~~~~~~~~~~~~~~t~L~~A~~--~~~~~-------~v~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~ 197 (235)
|++++..+ ..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+|+..+..+
T Consensus 162 ga~~n~~d------~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 162 PASLEATD------SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp CCCTTCCC------TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCcCccC------CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHH
Confidence 99999988 899999999999 78888 999999999999 899999999999999999999
Q ss_pred HHHHhhccc
Q psy5702 198 LLQYHLADV 206 (235)
Q Consensus 198 ~l~~~~~~~ 206 (235)
+++.++...
T Consensus 236 ~v~~Ll~~g 244 (256)
T 2etb_A 236 IFRHILQRE 244 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhCC
Confidence 999887764
No 50
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=1.1e-31 Score=194.99 Aligned_cols=158 Identities=28% Similarity=0.310 Sum_probs=142.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q psy5702 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGC 106 (235)
Q Consensus 27 g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 106 (235)
+.+|||.|+..|+.+.+++|++.....++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG- 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT-
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC-
Confidence 4689999999999999999999866658889999999999999999999999999999999999999999999977765
Q ss_pred hhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCCh
Q psy5702 107 VEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTP 186 (235)
Q Consensus 107 ~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 186 (235)
+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||
T Consensus 81 ----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 138 (172)
T 3v30_A 81 ----------------YTDIVGLLLERDVDINIYD------WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTP 138 (172)
T ss_dssp ----------------CHHHHHHHHTTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ----------------CHHHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 5566788899999999888 789999999999999999999999999999999999999
Q ss_pred hhhccchhhHHHHHHhhcccc
Q psy5702 187 LSITSDETTRKLLQYHLADVR 207 (235)
Q Consensus 187 l~~a~~~~~~~~l~~~~~~~~ 207 (235)
||+|+..+..++++.+.....
T Consensus 139 l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 139 MDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp HHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHH
Confidence 999999888888877665543
No 51
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=5.8e-31 Score=187.61 Aligned_cols=151 Identities=32% Similarity=0.346 Sum_probs=139.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q psy5702 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGC 106 (235)
Q Consensus 27 g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 106 (235)
..++||.|++.|+.+++++|++. +.+++ .+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG- 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT-
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-
Confidence 35899999999999999999998 55555 5889999999999999999999999999999999999999999988765
Q ss_pred hhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCCh
Q psy5702 107 VEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTP 186 (235)
Q Consensus 107 ~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 186 (235)
+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||
T Consensus 79 ----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 136 (153)
T 1awc_B 79 ----------------HANIVEVLLKHGADVNAKD------MLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTA 136 (153)
T ss_dssp ----------------CHHHHHHHHTTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ----------------hHHHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 4566788899999999888 789999999999999999999999999999999999999
Q ss_pred hhhccchhhHHHHHHh
Q psy5702 187 LSITSDETTRKLLQYH 202 (235)
Q Consensus 187 l~~a~~~~~~~~l~~~ 202 (235)
+++|+..+..++++++
T Consensus 137 l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 137 FDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999998875
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=6.8e-32 Score=210.09 Aligned_cols=160 Identities=28% Similarity=0.270 Sum_probs=109.3
Q ss_pred cCCCCcHHHHHHHc---CCHHHHHHHHHhCC----------CCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q psy5702 24 KHHGETPLHRAARL---GYIDAVAYCLEKFS----------HGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDS 90 (235)
Q Consensus 24 d~~g~~~L~~A~~~---~~~~~v~~li~~~~----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 90 (235)
|..|.||||+|+.. |+.+++++|++.+. ......|..|.||||+|+..|+.+++++|++.|++++..
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 44555555555543 55555555555411 011113344555555555555555555555555555554
Q ss_pred CC--------------CCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHH---cCCCCcchhhhhhhccCCCch
Q psy5702 91 AI--------------GGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLS---YGADPLLASYAVYFLSLPSRP 153 (235)
Q Consensus 91 ~~--------------~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~---~g~~~~~~~~~~~~~~~~~t~ 153 (235)
+. .|.||||+ |+..|+.+++++|++ +|++++..+ ..|+||
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~-----------------A~~~g~~~~v~~Ll~~~~~gad~~~~d------~~g~tp 187 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSL-----------------AACTNQLAIVKFLLQNSWQPADISARD------SVGNTV 187 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHH-----------------HHHTTCHHHHHHHHHCSSCCCCTTCCC------TTSCCH
T ss_pred ccccccccccccccccCCCCHHHH-----------------HHHcCCHHHHHHHHhcccCCCCceeeC------CCCCcH
Confidence 43 34455554 555667788889999 899999888 789999
Q ss_pred HHHHHhcCC---------HHHHHHHHHCCCCCC-------CccccCCChhhhccchhhHHHHHHhhccc
Q psy5702 154 LHDAAEKGC---------VEMVRLLLSYGADPL-------LASYAGHTPLSITSDETTRKLLQYHLADV 206 (235)
Q Consensus 154 L~~A~~~~~---------~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~a~~~~~~~~l~~~~~~~ 206 (235)
||+|+..++ .+++++|+++|++++ .+|..|.||||+|+..+..++++.++...
T Consensus 188 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 188 LHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 999999888 799999999999986 58999999999999999888888877653
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=7e-31 Score=188.75 Aligned_cols=155 Identities=25% Similarity=0.310 Sum_probs=142.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKG 105 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 105 (235)
...+|||.|+..|+.+++++|++. +.+++..+..|.||||+|+. |+.+++++|++.|++++.++..|.||||+|+..+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 456899999999999999999987 88899999999999999999 9999999999999999999999999999988765
Q ss_pred ChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCC-CCCccccCC
Q psy5702 106 CVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGAD-PLLASYAGH 184 (235)
Q Consensus 106 ~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~ 184 (235)
+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 82 -----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 138 (162)
T 1ihb_A 82 -----------------FLDTLQTLLEFQADVNIED------NEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD 138 (162)
T ss_dssp -----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred -----------------CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCC
Confidence 4566788899999999888 7899999999999999999999999998 699999999
Q ss_pred ChhhhccchhhHHHHHHhhcc
Q psy5702 185 TPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 185 t~l~~a~~~~~~~~l~~~~~~ 205 (235)
||||+|+..+..++++.++..
T Consensus 139 t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 139 TACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHh
Confidence 999999999999999888754
No 54
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=6.3e-30 Score=193.01 Aligned_cols=167 Identities=25% Similarity=0.211 Sum_probs=159.3
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..++.+++++|++.....++..+..|.||||+|+..++.+++++|++.|
T Consensus 36 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 115 (223)
T 2f8y_A 36 SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH 115 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC
Confidence 45688999999999999999999999999999999999999999866688999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhcc
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS 148 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 148 (235)
++++..+..|.||||+|+..++.+++++| |+|.|+..|+.+++++|+++|++++..+ .
T Consensus 116 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~------~ 189 (223)
T 2f8y_A 116 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD------H 189 (223)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC------T
T ss_pred CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc------c
Confidence 99999999999999999999999999998 9999999999999999999999999887 7
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHCCCCCC
Q psy5702 149 LPSRPLHDAAEKGCVEMVRLLLSYGADPL 177 (235)
Q Consensus 149 ~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 177 (235)
.|.|||++|+..++.+++++|+++|+...
T Consensus 190 ~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 190 MDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred cCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 89999999999999999999999998754
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1.5e-30 Score=185.94 Aligned_cols=154 Identities=27% Similarity=0.344 Sum_probs=142.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q psy5702 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGC 106 (235)
Q Consensus 27 g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 106 (235)
+.+|||.|+..|+.+.+++|++..+.+++..+..|.||||+ +..|+.+++++|++.|++++.++..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG- 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC-
Confidence 46899999999999999999998666888999999999999 9999999999999999999999999999999987764
Q ss_pred hhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCCh
Q psy5702 107 VEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTP 186 (235)
Q Consensus 107 ~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 186 (235)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++ ++++.+|..|.||
T Consensus 80 ----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 80 ----------------FLDTLKVLVEHGADVNVPD------GTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTP 136 (156)
T ss_dssp ----------------CHHHHHHHHHTTCCSCCCC------TTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCH
T ss_pred ----------------cHHHHHHHHHcCCCCCCcC------CCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCH
Confidence 5566788899999999888 7899999999999999999999999 9999999999999
Q ss_pred hhhccchhhHHHHHHhhcc
Q psy5702 187 LSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 187 l~~a~~~~~~~~l~~~~~~ 205 (235)
||+|+..+..++++.+...
T Consensus 137 l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 137 LELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHcCcHHHHHHHHhh
Confidence 9999999999999988764
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=4.2e-31 Score=201.31 Aligned_cols=170 Identities=24% Similarity=0.235 Sum_probs=156.9
Q ss_pred hceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCC------CCCC
Q psy5702 17 VRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGAD------PSDS 90 (235)
Q Consensus 17 ~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~ 90 (235)
+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++ ++..
T Consensus 35 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (236)
T 1ikn_D 35 LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT 113 (236)
T ss_dssp CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCC
T ss_pred HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhcc
Confidence 347889999999999999999999999999987 889999999999999999999999999999999876 4667
Q ss_pred CCCCCcHHHHHHHhCChhHHHHh-----------------HHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCch
Q psy5702 91 AIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRP 153 (235)
Q Consensus 91 ~~~g~t~l~~a~~~~~~~~~~~l-----------------~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~ 153 (235)
+..|.||||+|+..++.+++++| |+|+|+..|+.+++++|+++|++++..+ ..|.||
T Consensus 114 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~------~~g~tp 187 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT------YQGYSP 187 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC------TTCCCG
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc------CCCCCH
Confidence 88899999999999999999998 8999999999999999999999999888 799999
Q ss_pred HHHHHhcCCHHHHHHHHHCCCCCC--CccccCCChhhhccch
Q psy5702 154 LHDAAEKGCVEMVRLLLSYGADPL--LASYAGHTPLSITSDE 193 (235)
Q Consensus 154 L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~~a~~~ 193 (235)
||+|+..++.+++++|+++|++.. ..+..|.||.+.+.+.
T Consensus 188 l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 188 YQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp GGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999999999999876 7888999999988754
No 57
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=4.8e-31 Score=203.75 Aligned_cols=179 Identities=22% Similarity=0.140 Sum_probs=154.8
Q ss_pred HHHHHHHhhhhceeEeec----CCCCcHHHHHH---HcCCHHHHHHHHHhCC----------CCCCCCCCCCCcHHHHHH
Q psy5702 7 GDTVEDVGAEVRSWVINK----HHGETPLHRAA---RLGYIDAVAYCLEKFS----------HGPAPKDNAGYTPLHEAA 69 (235)
Q Consensus 7 ~~~~~~~~~~~~~~~~~d----~~g~~~L~~A~---~~~~~~~v~~li~~~~----------~~~~~~~~~g~t~L~~A~ 69 (235)
..+++.+...+.+++.++ ..|.||||+|+ +.|+.+++++|++... ...+..|..|.||||+|+
T Consensus 22 ~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 101 (260)
T 3jxi_A 22 EGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI 101 (260)
T ss_dssp TTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH
T ss_pred HHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH
Confidence 345666677888888776 77999999999 7799999999999721 334455668999999999
Q ss_pred hcCCHHHHHHHHhcCCCCCCCC--------------CCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHH---
Q psy5702 70 SHGWLDIARLLLMYGADPSDSA--------------IGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLS--- 132 (235)
Q Consensus 70 ~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~--- 132 (235)
..|+.+++++|++.|++++..+ ..|.||||+|+..+ +.+++++|++
T Consensus 102 ~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g-----------------~~~~v~~Ll~~~~ 164 (260)
T 3jxi_A 102 ERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN-----------------QPHIVHYLTENGH 164 (260)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT-----------------CHHHHHHHHHCSS
T ss_pred HcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC-----------------CHHHHHHHHhccc
Confidence 9999999999999999999998 58999999977764 5566788899
Q ss_pred cCCCCcchhhhhhhccCCCchHHHHHhcCC---------HHHHHHHHHCCCCC-------CCccccCCChhhhccchhhH
Q psy5702 133 YGADPLLASYAVYFLSLPSRPLHDAAEKGC---------VEMVRLLLSYGADP-------LLASYAGHTPLSITSDETTR 196 (235)
Q Consensus 133 ~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~---------~~~v~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~ 196 (235)
+|++++..+ ..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+..+..
T Consensus 165 ~ga~~~~~d------~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 165 KQADLRRQD------SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp CCCCTTCCC------TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred cCCCCcccC------CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 899999888 899999999998887 79999999999999 67999999999999999999
Q ss_pred HHHHHhhccccC
Q psy5702 197 KLLQYHLADVRG 208 (235)
Q Consensus 197 ~~l~~~~~~~~~ 208 (235)
++++.++.....
T Consensus 239 ~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 239 GIFQHIIRREIA 250 (260)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC
Confidence 999988876543
No 58
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=6.1e-30 Score=204.78 Aligned_cols=185 Identities=22% Similarity=0.169 Sum_probs=158.0
Q ss_pred HHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCC----------CCCCCCcHHHHHHhcCCHHHHH
Q psy5702 9 TVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAP----------KDNAGYTPLHEAASHGWLDIAR 78 (235)
Q Consensus 9 ~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~----------~~~~g~t~L~~A~~~~~~~~v~ 78 (235)
.+..+...+.+++.+|..|.||||+|+..|+.++++++++. +.+++. .+..|.||||+|++.|+.++++
T Consensus 107 ~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~-ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~ 185 (337)
T 4g8k_A 107 LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLK 185 (337)
T ss_dssp HHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHH
T ss_pred hhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc-CCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHH
Confidence 33444455556777889999999999999999999999998 666653 3456899999999999999999
Q ss_pred HHHh-cCCCCCCCCCCCCcHHHHHHHhCCh----hHHHHh----------------HHHHHHHcCCHHHHHHHHHc-CCC
Q psy5702 79 LLLM-YGADPSDSAIGGIRPLHDAAEKGCV----EMVRLL----------------PLHDAAEKGCVEMVRLLLSY-GAD 136 (235)
Q Consensus 79 ~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~~----~~~~~l----------------~l~~a~~~~~~~~~~~l~~~-g~~ 136 (235)
+|++ .|++++.++..|.|+++.++..+.. .++++| |||.|+..|+.++++.|+.. |++
T Consensus 186 ~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~ 265 (337)
T 4g8k_A 186 ILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 265 (337)
T ss_dssp HHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC
T ss_pred HHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc
Confidence 9996 5999999999999999987765442 355555 89999999999999999985 789
Q ss_pred CcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 137 PLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 137 ~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
++..+ ..|+||||+|++.|+.+++++|+++|++++. .+|||+|+..+..++++.++..
T Consensus 266 vn~~d------~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 266 INDTD------SDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSH 323 (337)
T ss_dssp TTCBC------TTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccCcC------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHC
Confidence 99888 8999999999999999999999999999875 4699999998888887776654
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.5e-29 Score=186.78 Aligned_cols=162 Identities=23% Similarity=0.291 Sum_probs=151.2
Q ss_pred chHHHHHHHhhhhc-eeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHH-h
Q psy5702 5 SLGDTVEDVGAEVR-SWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLL-M 82 (235)
Q Consensus 5 ~~~~~~~~~~~~~~-~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~ 82 (235)
+..+.++.++..+. +++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+ .
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 94 (201)
T 3hra_A 16 RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAGAQGRTEILAYMLKH 94 (201)
T ss_dssp TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 34566777777766 8999999999999999999999999999998 8899999999999999999999999999999 5
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCChhHHHHh-----------------HHHHHHHcCC-----HHHHHHHHHcCCCCcch
Q psy5702 83 YGADPSDSAIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKGC-----VEMVRLLLSYGADPLLA 140 (235)
Q Consensus 83 ~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l-----------------~l~~a~~~~~-----~~~~~~l~~~g~~~~~~ 140 (235)
.+++++..+..|.||||+|+..++.+++++| |+|.|+..++ .+++++|+++|++++..
T Consensus 95 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 95 ATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp SCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred cCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 6789999999999999999999999999998 9999999998 99999999999999988
Q ss_pred hhhhhhccCCCchHHHHHhcCCHHHHHHHHHCC
Q psy5702 141 SYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG 173 (235)
Q Consensus 141 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g 173 (235)
+ ..|.||||+|+..|+.+++++|+++|
T Consensus 175 ~------~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 175 D------NSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp C------TTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred C------CCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 8 78999999999999999999999886
No 60
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.1e-29 Score=192.85 Aligned_cols=176 Identities=27% Similarity=0.211 Sum_probs=152.3
Q ss_pred cchHHHHHHHhhh-hceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCC-----CCCCCCCCcHHHHHHhcCCHHHH
Q psy5702 4 QSLGDTVEDVGAE-VRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGP-----APKDNAGYTPLHEAASHGWLDIA 77 (235)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v 77 (235)
.+..+.++.++.. +.+++.+|..|.||||+|+..|+.+++++|++. +.+. +..|..|.||||+|+..|+.+++
T Consensus 13 ~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 91 (232)
T 2rfa_A 13 ENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNLV 91 (232)
T ss_dssp TTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHHH
Confidence 3456788999987 999999999999999999999999999999998 5443 66778999999999999999999
Q ss_pred HHHHhcCCCCCCCCC-------------CCCcHHHHHHHhCChhHHHHh----------------HHHHHHHcCCHHHH-
Q psy5702 78 RLLLMYGADPSDSAI-------------GGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMV- 127 (235)
Q Consensus 78 ~~Ll~~g~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~l----------------~l~~a~~~~~~~~~- 127 (235)
++|++.|++++..+. .|.||||+|+..++.+++++| |+|+|+..++.+++
T Consensus 92 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~ 171 (232)
T 2rfa_A 92 RALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFAC 171 (232)
T ss_dssp HHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHH
T ss_pred HHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHH
Confidence 999999999998765 799999999999999999998 99999999999988
Q ss_pred ---HHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCcc
Q psy5702 128 ---RLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLAS 180 (235)
Q Consensus 128 ---~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 180 (235)
++|+++|++.+........+..|.||||+|+..|+.+++++|+++|+......
T Consensus 172 ~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 172 QMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 99999999874222222223789999999999999999999999987765443
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=5.1e-31 Score=203.25 Aligned_cols=191 Identities=20% Similarity=0.126 Sum_probs=148.0
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHhCCCCCCC----CCCCCCcHHHHHHhc---CCHHHHHHHHhcCCCCCCC----
Q psy5702 26 HGETPLHRAARLGYID----AVAYCLEKFSHGPAP----KDNAGYTPLHEAASH---GWLDIARLLLMYGADPSDS---- 90 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~----~v~~li~~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~---- 90 (235)
.|+||||.|+..|+.+ ++++|++. +.+++. .|..|.||||+|+.. |+.+++++|++.|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 4889999999999997 55666667 788887 899999999999999 9999999999998887633
Q ss_pred -------CCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhh-------hhccCCCchHHH
Q psy5702 91 -------AIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAV-------YFLSLPSRPLHD 156 (235)
Q Consensus 91 -------~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~-------~~~~~~~t~L~~ 156 (235)
|..|.||||+|+..+ +.+++++|+++|++++..+... ..+..|.||||+
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g-----------------~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~ 142 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKR-----------------SLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSL 142 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHH
T ss_pred ccccccccccCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHH
Confidence 367999999977764 5566788899999998877210 000129999999
Q ss_pred HHhcCCHHHHHHHHH---CCCCCCCccccCCChhhhccc--hhhHH-------HHH---HhhccccCCCC--CcccccCC
Q psy5702 157 AAEKGCVEMVRLLLS---YGADPLLASYAGHTPLSITSD--ETTRK-------LLQ---YHLADVRGHEA--PKWDFAGP 219 (235)
Q Consensus 157 A~~~~~~~~v~~Ll~---~ga~~~~~~~~g~t~l~~a~~--~~~~~-------~l~---~~~~~~~~~~~--~~~~~~~~ 219 (235)
|+..|+.+++++|++ +|++++.+|..|.||||+|+. .+..+ +++ ..+++...... ...+..|.
T Consensus 143 A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~ 222 (256)
T 2etb_A 143 AACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL 222 (256)
T ss_dssp HHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSC
T ss_pred HHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCC
Confidence 999999999999999 999999999999999999997 44444 444 44555421110 22344567
Q ss_pred CcccccccccCCCCC
Q psy5702 220 ASCFDKQMVGYEPLA 234 (235)
Q Consensus 220 ~~~~~~~~~g~~~~~ 234 (235)
+++..+...|+.+++
T Consensus 223 tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 223 TPLKLAAKEGKIEIF 237 (256)
T ss_dssp CHHHHHHHTTCHHHH
T ss_pred CHHHHHHHhCCHHHH
Confidence 777777777765543
No 62
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=201.39 Aligned_cols=199 Identities=19% Similarity=0.139 Sum_probs=157.6
Q ss_pred HHHhhhhceeEeec---CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCC
Q psy5702 11 EDVGAEVRSWVINK---HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADP 87 (235)
Q Consensus 11 ~~~~~~~~~~~~~d---~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 87 (235)
+.++..+.+.+..+ .+|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|+++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 45666666666554 4556789999999999999999998 8889999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHH--HhcCCHHH
Q psy5702 88 SDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDA--AEKGCVEM 165 (235)
Q Consensus 88 ~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A--~~~~~~~~ 165 (235)
+.+|..|.||||+|+..+ +.+++++|+++|++++..+. ..|.||||+| +..++.++
T Consensus 81 n~~d~~g~tpLh~A~~~g-----------------~~~~v~~Ll~~ga~~~~~~~-----~~g~tpL~~A~a~~~~~~~~ 138 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCN-----------------DTVICMALVQHGAAIFATTL-----SDGATAFEKCDPYREGYADC 138 (229)
T ss_dssp TCCCTTCCCHHHHHHHTT-----------------CHHHHHHHHTTTCCTTCCCS-----STTCCTGGGCCTTSTTHHHH
T ss_pred CCCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCcccccC-----CCCCCHHHHHHHHhcChHHH
Confidence 999999999999987764 55667888999999988752 5899999999 99999999
Q ss_pred HHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCCCC
Q psy5702 166 VRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPLAK 235 (235)
Q Consensus 166 v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (235)
+++|+++|++++.+|..|.||++.++.....+++...+++.. ....+..|.+++..+...|+.+++|
T Consensus 139 v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~---~~~~d~~G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 139 ATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVT---VLRRDGPEETDWWWAALHGQEGYVP 205 (229)
T ss_dssp HHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEE---EEESSCTTCSSEEEEEETTEEEEEE
T ss_pred HHHHHHcCCCcccccCCchHHHHHHhhccccccCcccccccc---ccccCCCcccHHHHHHHcCCcceee
Confidence 999999999999999999999997666544443333333311 2234556778888888888777653
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.1e-29 Score=182.87 Aligned_cols=159 Identities=23% Similarity=0.212 Sum_probs=140.1
Q ss_pred cchHHHHHHHhhhhce-eEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHh
Q psy5702 4 QSLGDTVEDVGAEVRS-WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLM 82 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 82 (235)
.+..+.++.++..+.+ ++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 90 (172)
T 3v30_A 12 QGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGGYTDIVGLLLE 90 (172)
T ss_dssp TTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCCCHHHHHHHHH
Confidence 3456788888888877 788999999999999999999999999998 88899999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCC
Q psy5702 83 YGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGC 162 (235)
Q Consensus 83 ~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 162 (235)
.|++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++
T Consensus 91 ~g~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 91 RDVDINIYDWNGGTPLLYAVRGN-----------------HVKCVEALLARGADLTTEA------DSGYTPMDLAVALGY 147 (172)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCccccC------CCCCCHHHHHHHhCc
Confidence 99999999999999999987664 5566788899999999888 789999999999999
Q ss_pred HHHHHHHHHCCCCCCCccccCCCh
Q psy5702 163 VEMVRLLLSYGADPLLASYAGHTP 186 (235)
Q Consensus 163 ~~~v~~Ll~~ga~~~~~~~~g~t~ 186 (235)
.+++++|+++|+++...+..|.||
T Consensus 148 ~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 148 RKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999999999999999988887
No 64
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=3.9e-29 Score=199.48 Aligned_cols=207 Identities=14% Similarity=0.068 Sum_probs=151.6
Q ss_pred chHHHHHHHhhhhceeEe-----------------ecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCC-CCCCCCcHHH
Q psy5702 5 SLGDTVEDVGAEVRSWVI-----------------NKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAP-KDNAGYTPLH 66 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-----------------~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~-~~~~g~t~L~ 66 (235)
+..+.++.++..+.+... +.....+.+|.|+..+..++++.|++. +.+++. .|..|.||||
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~-g~dvn~~~d~~g~TpLh 136 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT-QLNLNIPVDEHGNTPLH 136 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS-CCCSCSCCSTTCCCHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc-CCCcccccCCCCCcHHH
Confidence 456788999988877544 111222335777777778888888776 889998 8999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC---hhH----HHHh-------------HHHHHHH----cC
Q psy5702 67 EAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGC---VEM----VRLL-------------PLHDAAE----KG 122 (235)
Q Consensus 67 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~---~~~----~~~l-------------~l~~a~~----~~ 122 (235)
+|+..|+.+++++|++.|++++.++..|.||||+|+..++ .++ ++.+ |||+|+. .|
T Consensus 137 ~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g 216 (327)
T 1sw6_A 137 WLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTG 216 (327)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccc
Confidence 9999999999999999999999999999999999999887 333 3332 9999999 89
Q ss_pred CHHHHHHHHHc--------------------CCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCcccc
Q psy5702 123 CVEMVRLLLSY--------------------GADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYA 182 (235)
Q Consensus 123 ~~~~~~~l~~~--------------------g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 182 (235)
+.+++++|++. |++++..+ ..|.||||.|+. +++|+++ +++.+|..
T Consensus 217 ~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~------~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~ 282 (327)
T 1sw6_A 217 CSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKN------GERKDSILENLD------LKWIIAN--MLNAQDSN 282 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGCCEEEC----------------------CHHHHHCS------HHHHHHH--TTTCCCTT
T ss_pred cHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccccc------ccCCChhHHHHH------HHHHHHh--CCCCCCCC
Confidence 99999999987 77888777 789999999986 8899998 58889999
Q ss_pred CCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccc
Q psy5702 183 GHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMV 228 (235)
Q Consensus 183 g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (235)
|.||||+|+..+..++++.++.. +.+....+..|.+++..+...
T Consensus 283 G~TpLh~A~~~g~~~~v~~Ll~~--Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 283 GDTCLNIAARLGNISIVDALLDY--GADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHHT--TCCTTCCCTTSCCGGGGTCC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHhc
Confidence 99999999999999999988865 333333444555666555443
No 65
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=4.8e-29 Score=178.25 Aligned_cols=145 Identities=24% Similarity=0.284 Sum_probs=115.9
Q ss_pred eecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCc-HHHH
Q psy5702 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIR-PLHD 100 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~ 100 (235)
..+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+ .|+.+++++|++.|++++.++..|.| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 4678899999999999999999999998 8899999999999999985 89999999999999999999999999 9999
Q ss_pred HHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCcc
Q psy5702 101 AAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLAS 180 (235)
Q Consensus 101 a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 180 (235)
|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|
T Consensus 85 A~~~~-----------------~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 85 AAREG-----------------FLDTLVVLHRAGARLDVRD------AWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN 141 (156)
T ss_dssp HHHHT-----------------CHHHHHHHHHHTCCSSCCC------TTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred HHHCC-----------------CHHHHHHHHHcCCCCcccC------CCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccC
Confidence 87765 4566788899999999888 789999999999999999999999999999999
Q ss_pred ccCCChhhhcc
Q psy5702 181 YAGHTPLSITS 191 (235)
Q Consensus 181 ~~g~t~l~~a~ 191 (235)
..|.||.+-+.
T Consensus 142 ~~g~t~~~~~~ 152 (156)
T 1bi7_B 142 HARIDAAEGPS 152 (156)
T ss_dssp -----------
T ss_pred cCcCcccccCC
Confidence 99999987443
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.8e-28 Score=175.09 Aligned_cols=146 Identities=25% Similarity=0.262 Sum_probs=133.3
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+. ++.+++++|++. +.+++.++..|.||||+|+..|+.+++++|++.|
T Consensus 16 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 93 (162)
T 1ihb_A 16 GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ 93 (162)
T ss_dssp TCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 45788999999999999999999999999999 999999999998 8889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCC-CcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGAD-PLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
++++.++..|.||||+|+..+ +.+++++|+++|++ ++..+ ..|.||||+|+..++.
T Consensus 94 ~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~g~~~~~~~~------~~g~t~l~~A~~~~~~ 150 (162)
T 1ihb_A 94 ADVNIEDNEGNLPLHLAAKEG-----------------HLRVVEFLVKHTASNVGHRN------HKGDTACDLARLYGRN 150 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHHSCCCTTCCC------TTSCCHHHHHHHTTCH
T ss_pred CCCCCcCCCCCCHHHHHHHcC-----------------CHHHHHHHHHccCCCCCCcC------CCCCcHHHHHHHcCCH
Confidence 999999999999999987765 45667888999987 47766 7899999999999999
Q ss_pred HHHHHHHHCCCC
Q psy5702 164 EMVRLLLSYGAD 175 (235)
Q Consensus 164 ~~v~~Ll~~ga~ 175 (235)
+++++|+++|||
T Consensus 151 ~~~~~Ll~~GAd 162 (162)
T 1ihb_A 151 EVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHhCCC
Confidence 999999999986
No 67
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=3.1e-29 Score=184.18 Aligned_cols=160 Identities=18% Similarity=0.139 Sum_probs=138.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHhcCCH----HHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy5702 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKD-NAGYTPLHEAASHGWL----DIARLLLMYGADPSDSAIGGIRPLHDA 101 (235)
Q Consensus 27 g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~-~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~t~l~~a 101 (235)
+.++||.|++.|+.+.++.++.. + .+..+ ..|.||||+|+..++. +++++|++.|++++.++..|.||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 56789999999999999999986 3 34444 6799999999999975 599999999999999999999999999
Q ss_pred HHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCC-chHHHHHhcC-----CHHHHHHHHH-CCC
Q psy5702 102 AEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPS-RPLHDAAEKG-----CVEMVRLLLS-YGA 174 (235)
Q Consensus 102 ~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-t~L~~A~~~~-----~~~~v~~Ll~-~ga 174 (235)
+..++.++.. ..+++++|+++|++++..+ ..|+ ||||+|+..+ ..+++++|++ +|+
T Consensus 83 ~~~~~~~~~~-----------~~~iv~~Ll~~Gadin~~d------~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 83 FQGGGNDITG-----------TTELCKIFLEKGADITALY------KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145 (186)
T ss_dssp HHHCTTCHHH-----------HHHHHHHHHHTTCCSSSCB------GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred HHcCCcchhh-----------HHHHHHHHHHCCCCCCccC------CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence 9988765432 2478999999999999998 7899 9999999954 4569999999 999
Q ss_pred CCCCccccCCChhhhccchhhHHHHHHhhccc
Q psy5702 175 DPLLASYAGHTPLSITSDETTRKLLQYHLADV 206 (235)
Q Consensus 175 ~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~ 206 (235)
+++.+|..|+||||+|++.+..++++.+....
T Consensus 146 d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 146 QLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999999999999988888887766543
No 68
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1e-28 Score=172.60 Aligned_cols=134 Identities=26% Similarity=0.353 Sum_probs=118.7
Q ss_pred hceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCC-CC
Q psy5702 17 VRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIG-GI 95 (235)
Q Consensus 17 ~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~ 95 (235)
+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+. ++.+++++|++.|++++.++.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 356778899999999999999999999999988 78888899999999999999 9999999999999999999998 89
Q ss_pred cHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCC
Q psy5702 96 RPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGAD 175 (235)
Q Consensus 96 t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~ 175 (235)
||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|+|
T Consensus 80 t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREG-----------------FLDTLVVLHRAGARLDVCD------AWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHT-----------------CHHHHHHHHHTCCCCCCCS------SSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcC-----------------CHHHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999977764 4466777889999988887 7899999999999999999999998876
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=9e-28 Score=173.83 Aligned_cols=146 Identities=31% Similarity=0.374 Sum_probs=135.0
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
.+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.
T Consensus 24 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 102 (169)
T 2y1l_E 24 AGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKN-GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN 102 (169)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3457889999999999999999999999999999999999999998 888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
|++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.
T Consensus 103 g~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 103 GADVNANDMEGHTPLHLAAMFG-----------------HLEIVEVLLKNGADVNAQD------KFGKTAFDISIDNGNE 159 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCH
T ss_pred CCCCCCCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHhCCH
Confidence 9999999999999999987764 5566788899999998887 7899999999999999
Q ss_pred HHHHHHHHCC
Q psy5702 164 EMVRLLLSYG 173 (235)
Q Consensus 164 ~~v~~Ll~~g 173 (235)
+++++|+++|
T Consensus 160 ~~~~~L~~~G 169 (169)
T 2y1l_E 160 DLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.8e-28 Score=189.67 Aligned_cols=167 Identities=24% Similarity=0.211 Sum_probs=133.5
Q ss_pred cchHHHHHHHhhhhce-------eEe----ecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCC-------------
Q psy5702 4 QSLGDTVEDVGAEVRS-------WVI----NKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDN------------- 59 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~-------~~~----~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~------------- 59 (235)
.+..++++.|+..+.+ ++. +|..|.||||+|+..|+.+++++|++. +.+++..+.
T Consensus 67 ~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~ 145 (273)
T 2pnn_A 67 NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGF 145 (273)
T ss_dssp TTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCC
T ss_pred cCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccccccccccccccccc
Confidence 3567889999998765 222 567999999999999999999999998 888888886
Q ss_pred -CCCcHHHHHHhcCCHHHHHHHHh---cCCCCCCCCCCCCcHHHHHHHhCCh--hHHHHhHHHHHHHcCCHHHHHHHHHc
Q psy5702 60 -AGYTPLHEAASHGWLDIARLLLM---YGADPSDSAIGGIRPLHDAAEKGCV--EMVRLLPLHDAAEKGCVEMVRLLLSY 133 (235)
Q Consensus 60 -~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~~--~~~~~l~l~~a~~~~~~~~~~~l~~~ 133 (235)
.|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++. +..+++ .+++++|+++
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~----------~~~v~~Ll~~ 215 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFV----------TSMYNEILIL 215 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH----------HHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHH----------HHHHHHHHHh
Confidence 79999999999999999999999 9999999999999999999987652 222221 5788999999
Q ss_pred CCCCcc-------hhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCC-CCCCccccCCChh
Q psy5702 134 GADPLL-------ASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGA-DPLLASYAGHTPL 187 (235)
Q Consensus 134 g~~~~~-------~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l 187 (235)
|++++. .+ ..|.||||+|+..|+.+++++|+++|+ |+......+.+|-
T Consensus 216 ga~~n~~~~~~~~~d------~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 216 GAKLHPTLKLEEITN------RKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHCTTCCGGGCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred hhhcccccccccccC------CCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 988863 44 789999999999999999999999999 8887777666654
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=8.8e-28 Score=175.46 Aligned_cols=155 Identities=25% Similarity=0.209 Sum_probs=141.7
Q ss_pred chHHHHHHHhhh-hceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 5 SLGDTVEDVGAE-VRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
+..+.++.++.. +.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (179)
T 3f6q_A 16 GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASHGHRDIVQKLLQY 94 (179)
T ss_dssp TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 445778888887 677889999999999999999999999999998 889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
|++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.|||++|+..++.
T Consensus 95 g~~~~~~d~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 95 KADINAVNEHGNVPLHYACFWG-----------------QDQVAEDLVANGALVSICN------KYGEMPVDKAKAPLRE 151 (179)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTCCSSBCC------TTSCCGGGGSCHHHHH
T ss_pred CCCCCccCCCCCCHHHHHHHcC-----------------CHHHHHHHHHCCCCcchhc------cCCCCcHHHHHHHHHH
Confidence 9999999999999999987765 4566788899999999888 8999999999999999
Q ss_pred HHHHHHHHCCCCCCCccccC
Q psy5702 164 EMVRLLLSYGADPLLASYAG 183 (235)
Q Consensus 164 ~~v~~Ll~~ga~~~~~~~~g 183 (235)
+++++|+++|++++..+..+
T Consensus 152 ~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 152 LLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHHHHTTCCCSCBCCCC
T ss_pred HHHHHHHHhhcCcccCCccc
Confidence 99999999999998876654
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.1e-28 Score=188.43 Aligned_cols=159 Identities=21% Similarity=0.246 Sum_probs=105.7
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy5702 24 KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAE 103 (235)
Q Consensus 24 d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~ 103 (235)
+..|+||||.|++.++.+.++.|+++ +.+++.. ..|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAH-GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhcc-CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 45799999999999999999999998 7777754 778999999999999999999999999999999999999999877
Q ss_pred hCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccC
Q psy5702 104 KGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAG 183 (235)
Q Consensus 104 ~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 183 (235)
.+ +.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++.++..|
T Consensus 80 ~g-----------------~~~~v~~Ll~~ga~~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 136 (239)
T 1ycs_B 80 AG-----------------HTEIVKFLVQFGVNVNAAD------SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD 136 (239)
T ss_dssp HT-----------------CHHHHHHHHHHTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred cC-----------------CHHHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC
Confidence 65 4466777899999999888 789999999999999999999999999999999887
Q ss_pred C-Chhhhc--cchhhHH---HHHHhhcccc
Q psy5702 184 H-TPLSIT--SDETTRK---LLQYHLADVR 207 (235)
Q Consensus 184 ~-t~l~~a--~~~~~~~---~l~~~~~~~~ 207 (235)
. ||+|+| +..+..+ ++...+++..
T Consensus 137 ~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 137 MQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp CCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred CcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 7 999999 4444444 4444444443
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=2.5e-29 Score=194.15 Aligned_cols=193 Identities=22% Similarity=0.165 Sum_probs=145.9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHH----hCCCCCCCCC----CCCCcHHHHHH---hcCCHHHHHHHHhcCCC------
Q psy5702 24 KHHGETPLHRAARLGYIDAVAYCLE----KFSHGPAPKD----NAGYTPLHEAA---SHGWLDIARLLLMYGAD------ 86 (235)
Q Consensus 24 d~~g~~~L~~A~~~~~~~~v~~li~----~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~g~~------ 86 (235)
+..|+++||.|++.|+.+.++.|++ . +..++..+ ..|.||||+|+ +.|+.+++++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 4578999999999999996555555 5 77777554 77999999999 77999999999998744
Q ss_pred -----CCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhh--------hhhccCCCch
Q psy5702 87 -----PSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYA--------VYFLSLPSRP 153 (235)
Q Consensus 87 -----~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~--------~~~~~~~~t~ 153 (235)
++..|..|.||||+|+..| +.+++++|+++|++++..+.. ...+..|.||
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g-----------------~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tp 143 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERR-----------------CKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELP 143 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSH
T ss_pred hhcccccccccCCCCHHHHHHHcC-----------------CHHHHHHHHhCCCCcCccccccccCcccccccccCCCCH
Confidence 4455568999999977765 556678889999998877621 0000269999
Q ss_pred HHHHHhcCCHHHHHHHHH---CCCCCCCccccCCChhhhccchhh---------HHHHH---HhhccccCCCC--Ccccc
Q psy5702 154 LHDAAEKGCVEMVRLLLS---YGADPLLASYAGHTPLSITSDETT---------RKLLQ---YHLADVRGHEA--PKWDF 216 (235)
Q Consensus 154 L~~A~~~~~~~~v~~Ll~---~ga~~~~~~~~g~t~l~~a~~~~~---------~~~l~---~~~~~~~~~~~--~~~~~ 216 (235)
||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..+. .++++ ..++++..... ...+.
T Consensus 144 L~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~ 223 (260)
T 3jxi_A 144 LSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence 999999999999999999 999999999999999999995332 34444 44454422111 23445
Q ss_pred cCCCcccccccccCCCCC
Q psy5702 217 AGPASCFDKQMVGYEPLA 234 (235)
Q Consensus 217 ~~~~~~~~~~~~g~~~~~ 234 (235)
.|.+++..+...|+.+++
T Consensus 224 ~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 224 DGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp TSCCHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHcCCHHHH
Confidence 667778777777776543
No 74
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2e-27 Score=171.58 Aligned_cols=149 Identities=25% Similarity=0.258 Sum_probs=137.6
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
.+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.
T Consensus 13 ~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (167)
T 3v31_A 13 QGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSKGYTDIVKMLLDC 91 (167)
T ss_dssp TTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 3457889999999999999999999999999999999999999998 888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
|++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..|+.
T Consensus 92 g~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~ 148 (167)
T 3v31_A 92 GVDVNEYDWNGGTPLLYAVHGN-----------------HVKCVKMLLESGADPTIET------DSGYNSMDLAVALGYR 148 (167)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCH
T ss_pred CCCCCcCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCcH
Confidence 9999999999999999987764 5566788899999998888 7899999999999999
Q ss_pred HHHHHHHHCCCCC
Q psy5702 164 EMVRLLLSYGADP 176 (235)
Q Consensus 164 ~~v~~Ll~~ga~~ 176 (235)
+++++|+++++++
T Consensus 149 ~~~~~L~~~~~~~ 161 (167)
T 3v31_A 149 SVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987654
No 75
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.8e-27 Score=173.93 Aligned_cols=145 Identities=23% Similarity=0.267 Sum_probs=134.6
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..++.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|
T Consensus 46 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 124 (192)
T 2rfm_A 46 GMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG 124 (192)
T ss_dssp TCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 446789999999999999999999999999999999999999998 8889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHH
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVE 164 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 164 (235)
++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+
T Consensus 125 ~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 125 ANVNDRNLEGETPLIVASKYG-----------------RSEIVKKLLELGADISARD------LTGLTAEASARIFGRQE 181 (192)
T ss_dssp CCSSCCCTTCCCHHHHHHHHT-----------------CHHHHHHHHHTTCCTTCBC------TTSCBHHHHHHHTTCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHhCcHH
Confidence 999999999999999987765 4566788899999999888 79999999999999999
Q ss_pred HHHHHHHCC
Q psy5702 165 MVRLLLSYG 173 (235)
Q Consensus 165 ~v~~Ll~~g 173 (235)
++++|+++|
T Consensus 182 ~v~~Ll~~~ 190 (192)
T 2rfm_A 182 VIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999999864
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=4.8e-28 Score=184.89 Aligned_cols=167 Identities=20% Similarity=0.241 Sum_probs=129.9
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
.+..+.++.++..|.++++. ..|.||||.|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.
T Consensus 15 ~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 92 (239)
T 1ycs_B 15 TNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF 92 (239)
T ss_dssp -----------------------CHHHHHHHHHHTCHHHHHHHTST-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred hhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45678899999999999876 7899999999999999999999988 778999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCC-chHHHH--Hhc
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPS-RPLHDA--AEK 160 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-t~L~~A--~~~ 160 (235)
|++++.+|..|.||||+|+..+ +.+++++|+++|++++..+ ..|. ||||+| +..
T Consensus 93 ga~~~~~d~~g~tpL~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~~~~t~l~~a~~~~~ 149 (239)
T 1ycs_B 93 GVNVNAADSDGWTPLHCAASCN-----------------NVQVCKFLVESGAAVFAMT------YSDMQTAADKCEEMEE 149 (239)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------SSSCCCHHHHCCSSST
T ss_pred CCCCCccCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCcceec------CCCCcchHHHHHHhhh
Confidence 9999999999999999987664 5567788899999998887 4555 999999 788
Q ss_pred CCHHHHHHHHHCCCCCCCc---------cccCCChhhhccchhh
Q psy5702 161 GCVEMVRLLLSYGADPLLA---------SYAGHTPLSITSDETT 195 (235)
Q Consensus 161 ~~~~~v~~Ll~~ga~~~~~---------~~~g~t~l~~a~~~~~ 195 (235)
|+.+++++|+++|++++.. +..+.++.+++...+.
T Consensus 150 g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 150 GYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred ccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9999999999999998876 4557888888877654
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.6e-26 Score=164.52 Aligned_cols=140 Identities=29% Similarity=0.385 Sum_probs=128.8
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+.. .|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|
T Consensus 13 g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 90 (153)
T 1awc_B 13 GQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRA-GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG 90 (153)
T ss_dssp TCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred CCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcC
Confidence 45688999999999876 688999999999999999999999987 8889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHH
Q psy5702 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVE 164 (235)
Q Consensus 85 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 164 (235)
++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..|+.+
T Consensus 91 ~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 91 ADVNAKDMLKMTALHWATEHN-----------------HQEVVELLIKYGADVHTQS------KFCKTAFDISIDNGNED 147 (153)
T ss_dssp CCTTCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCHH
Confidence 999999999999999977764 5566788899999999888 78999999999999999
Q ss_pred HHHHH
Q psy5702 165 MVRLL 169 (235)
Q Consensus 165 ~v~~L 169 (235)
++++|
T Consensus 148 i~~~L 152 (153)
T 1awc_B 148 LAEIL 152 (153)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
No 78
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=2.7e-26 Score=157.61 Aligned_cols=126 Identities=45% Similarity=0.613 Sum_probs=116.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKG 105 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 105 (235)
+|+||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 589999999999999999999998 7888999999999999999999999999999999999999999999999977764
Q ss_pred ChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCC
Q psy5702 106 CVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGAD 175 (235)
Q Consensus 106 ~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~ 175 (235)
+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|+|
T Consensus 80 -----------------~~~~~~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 -----------------HLEVVKLLLEAGADVNAKD------KNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -----------------hHHHHHHHHHcCCCCcccC------CCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 4566778899999998887 7899999999999999999999999986
No 79
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.5e-28 Score=189.53 Aligned_cols=188 Identities=20% Similarity=0.165 Sum_probs=156.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHH
Q psy5702 27 GETPLHRAARLGYIDAVAYCLEKFSHG--PAPKDNAGYTPLHEAASHGWLDIARLLLMYGA-DPSDSAIGGIRPLHDAAE 103 (235)
Q Consensus 27 g~~~L~~A~~~~~~~~v~~li~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~a~~ 103 (235)
+++++|.|+..++.+.++.+++. ... ++..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.||+|+|+.
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 45778889999999999988875 223 67899999999999999999999999999998 999999999999999884
Q ss_pred hCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccC
Q psy5702 104 KGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAG 183 (235)
Q Consensus 104 ~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 183 (235)
.... ..++.+++++|++.|...+..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 155 ~~~~------------~~~~~~~v~~Ll~~g~~~~~~~------~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G 216 (276)
T 4hbd_A 155 ATLK------------TQDDIETVLQLFRLGNINAKAS------QAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDG 216 (276)
T ss_dssp CCCC------------SHHHHHHHHHHHHHSCTTCCCT------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHhh------------hhhhHHHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Confidence 3211 1245678899999998877776 789999999999999999999999999999999999
Q ss_pred CChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCCC
Q psy5702 184 HTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPLA 234 (235)
Q Consensus 184 ~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 234 (235)
.||||+|+..+..++++.++... +.+....+..|.+++..+...|+.+++
T Consensus 217 ~TpLh~A~~~g~~~iv~~Ll~~~-gad~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 217 STALMCACEHGHKEIAGLLLAVP-SCDISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTST-TCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhcC-CCCCcCcCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999988721 223333455677777777777765543
No 80
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.8e-26 Score=166.15 Aligned_cols=145 Identities=32% Similarity=0.405 Sum_probs=128.9
Q ss_pred chHHHHHHHhh-hhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 5 SLGDTVEDVGA-EVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
+-.+.++.++. .+.+....+..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..++.+++++|++.
T Consensus 19 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 97 (165)
T 3twr_A 19 GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHNACSYGHYEVAELLVKH 97 (165)
T ss_dssp TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhC
Confidence 34577777777 5667777888999999999999999999999998 888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
|++++.++..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+. ++.
T Consensus 98 g~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 98 GAVVNVADLWKFTPLHEAAAKG-----------------KYEICKLLLQHGADPTKKN------RDGNTPLDLVKD-GDT 153 (165)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCTGGGSCT-TCH
T ss_pred CCCCCCcCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCCcccC------CCCCChhHhHhc-CCh
Confidence 9999999999999999987765 5566788899999999888 899999999877 899
Q ss_pred HHHHHHHHCCC
Q psy5702 164 EMVRLLLSYGA 174 (235)
Q Consensus 164 ~~v~~Ll~~ga 174 (235)
+++++|+++|+
T Consensus 154 ~i~~~L~~~gA 164 (165)
T 3twr_A 154 DIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHhhccc
Confidence 99999999886
No 81
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.4e-29 Score=192.24 Aligned_cols=173 Identities=18% Similarity=0.109 Sum_probs=151.8
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 32 g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 110 (229)
T 2vge_A 32 GELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPLHCAASCNDTVICMALVQHG 110 (229)
T ss_dssp TCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 456889999999999999999999999999999999999999998 8999999999999999999999999999999999
Q ss_pred CCCCCCC-CCCCcHHHHH--HHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcC
Q psy5702 85 ADPSDSA-IGGIRPLHDA--AEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKG 161 (235)
Q Consensus 85 ~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~ 161 (235)
++++..+ ..|.||||+| +.. |+.+++++|+++|++++..+ ..+.||++.+...+
T Consensus 111 a~~~~~~~~~g~tpL~~A~a~~~-----------------~~~~~v~~Ll~~ga~~~~~~------~~~~~~l~~~~~~~ 167 (229)
T 2vge_A 111 AAIFATTLSDGATAFEKCDPYRE-----------------GYADCATYLADVEQSMGLMN------SGAVYALWDYSAEF 167 (229)
T ss_dssp CCTTCCCSSTTCCTGGGCCTTST-----------------THHHHHHHHHHHHHHTTTSG------GGEEEESSCBCCSS
T ss_pred CCcccccCCCCCCHHHHHHHHhc-----------------ChHHHHHHHHHcCCCccccc------CCchHHHHHHhhcc
Confidence 9999986 6999999997 444 55677888999999988887 67889998665554
Q ss_pred CHHHHHHHHHCCCC--CCCccccCCChhhhccchhhHHHHHHhhc
Q psy5702 162 CVEMVRLLLSYGAD--PLLASYAGHTPLSITSDETTRKLLQYHLA 204 (235)
Q Consensus 162 ~~~~v~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~l~~~~~ 204 (235)
.. ++|++.|++ ++.+|..|.||||+|+..+..++++...-
T Consensus 168 ~~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 168 GD---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp TT---BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred cc---ccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 33 577888988 67789999999999999988888876443
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=6.6e-27 Score=163.31 Aligned_cols=131 Identities=30% Similarity=0.412 Sum_probs=120.0
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHH
Q psy5702 51 SHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLL 130 (235)
Q Consensus 51 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l 130 (235)
+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+. ++ .+++++|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~-----------------~~~v~~L 63 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GS-----------------AQVAELL 63 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SC-----------------HHHHHHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CC-----------------HHHHHHH
Confidence 56788899999999999999999999999999999999999999999999776 54 4567788
Q ss_pred HHcCCCCcchhhhhhhccC-CCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 131 LSYGADPLLASYAVYFLSL-PSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 131 ~~~g~~~~~~~~~~~~~~~-~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
+++|++++..+ .. |.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+..++++.++..
T Consensus 64 l~~g~~~~~~~------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 64 LLHGAEPNCAD------PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp HHHTCCSSCCB------TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHCCCCCCCcC------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999888 67 99999999999999999999999999999999999999999999988888887653
No 83
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=2e-26 Score=160.97 Aligned_cols=127 Identities=35% Similarity=0.485 Sum_probs=107.6
Q ss_pred CCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCC
Q psy5702 56 PKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGA 135 (235)
Q Consensus 56 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~ 135 (235)
.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..+ +.+++++|+++|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-----------------~~~~~~~Ll~~g~ 67 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHG-----------------HLKVVELLLQHKA 67 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT-----------------CHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCC
Confidence 56788888888888888888888888888888888888888888877654 4456677788888
Q ss_pred CCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 136 DPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 136 ~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
+++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..+++..+...
T Consensus 68 ~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 68 LVNTTG------YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp CTTCCC------GGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred cccCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 888777 6789999999999999999999999999999999999999999999988888766544
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=3.9e-26 Score=159.39 Aligned_cols=127 Identities=30% Similarity=0.366 Sum_probs=107.9
Q ss_pred ecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy5702 23 NKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAA 102 (235)
Q Consensus 23 ~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~ 102 (235)
....+.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..++.+++++|++.|++++..|..|.||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 445677899999999999999999988 7888888899999999999999999999999999999999999999999877
Q ss_pred HhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCC
Q psy5702 103 EKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG 173 (235)
Q Consensus 103 ~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g 173 (235)
..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|
T Consensus 89 ~~~-----------------~~~~v~~Ll~~g~~~~~~~------~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIG-----------------HLEIAEVLLKHGADVNAQD------KFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcC-----------------CHHHHHHHHHcCCCCcCcC------CCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 664 4456777888898888777 78899999999999999999998876
No 85
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.2e-25 Score=160.38 Aligned_cols=142 Identities=24% Similarity=0.309 Sum_probs=127.8
Q ss_pred chHHHHHHHhhh-hceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy5702 5 SLGDTVEDVGAE-VRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83 (235)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 83 (235)
+..+.++.++.. +.+.+.+|..|.||||+ +..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.
T Consensus 13 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 90 (156)
T 1bd8_A 13 GDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEH 90 (156)
T ss_dssp TCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 456778888887 33888899999999999 999999999999998 889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCH
Q psy5702 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCV 163 (235)
Q Consensus 84 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 163 (235)
|++++.++..|.||||+|+..++ .+++++|++. ++++..+ ..|.||||+|+..|+.
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~~-----------------~~~v~~Ll~~-~~~~~~~------~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 91 GADVNVPDGTGALPIHLAVQEGH-----------------TAVVSFLAAE-SDLHRRD------ARGLTPLELALQRGAQ 146 (156)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTC-----------------HHHHHHHHTT-SCTTCCC------TTSCCHHHHHHHSCCH
T ss_pred CCCCCCcCCCCCcHHHHHHHhCh-----------------HHHHHHHHhc-cCCCCcC------CCCCCHHHHHHHcCcH
Confidence 99999999999999999887654 4566777888 8888877 7899999999999999
Q ss_pred HHHHHHHHC
Q psy5702 164 EMVRLLLSY 172 (235)
Q Consensus 164 ~~v~~Ll~~ 172 (235)
+++++|+++
T Consensus 147 ~~v~~Ll~~ 155 (156)
T 1bd8_A 147 DLVDILQGH 155 (156)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999874
No 86
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=2.3e-25 Score=152.74 Aligned_cols=120 Identities=33% Similarity=0.388 Sum_probs=99.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCC
Q psy5702 58 DNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADP 137 (235)
Q Consensus 58 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~ 137 (235)
+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..+ +.+++++|+++|+++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~g~~~ 66 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG-----------------QLEILEFLLLKGADI 66 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTT-----------------CHHHHHHHHTTTCCT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcC-----------------CHHHHHHHHHcCCCC
Confidence 456778888888888888888888888888888888888888877654 445667778888888
Q ss_pred cchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHH
Q psy5702 138 LLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQ 200 (235)
Q Consensus 138 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~ 200 (235)
+..+ ..|+||||+|+..++.+++++|+++|++++.+|..|.||+|+|...+..++++
T Consensus 67 ~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll~ 123 (123)
T 3aaa_C 67 NAPD------KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123 (123)
T ss_dssp TCCC------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHHC
T ss_pred CcCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHhC
Confidence 8777 78899999999999999999999999999999999999999998887777663
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=7.1e-26 Score=158.18 Aligned_cols=132 Identities=37% Similarity=0.526 Sum_probs=115.6
Q ss_pred ceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcH
Q psy5702 18 RSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRP 97 (235)
Q Consensus 18 ~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 97 (235)
.|. .+|..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..++.+++++|++.|++++.++..|.||
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 344 6899999999999999999999999998 88899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCC
Q psy5702 98 LHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGA 174 (235)
Q Consensus 98 l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga 174 (235)
||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..+..+++++|.+.+.
T Consensus 80 L~~A~~~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 80 LHDAAKNG-----------------HVDIVKLLLSYGASRNAVN------IFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHcC-----------------CHHHHHHHHHcCCCCCCCC------CCCCCHHHHHhhccHHHHHhhcccccc
Confidence 99987765 4566788899999999888 899999999999999998887776543
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.7e-25 Score=155.05 Aligned_cols=125 Identities=31% Similarity=0.342 Sum_probs=114.2
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCC
Q psy5702 57 KDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGAD 136 (235)
Q Consensus 57 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~ 136 (235)
....+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+ +.+++++|+++|++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~g~~ 72 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHG-----------------HLEIVEVLLKNGAD 72 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-----------------CHHHHHHHHHTTCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999999999988765 45667888999999
Q ss_pred CcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhc
Q psy5702 137 PLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLA 204 (235)
Q Consensus 137 ~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~ 204 (235)
++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+..++++.+..
T Consensus 73 ~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 73 VNAVD------AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp TTCCC------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99888 789999999999999999999999999999999999999999999999999988764
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=3.5e-26 Score=167.93 Aligned_cols=153 Identities=12% Similarity=0.024 Sum_probs=127.8
Q ss_pred HHHHHHHhhhhceeEeec-CCCCcHHHHHHHcCCH----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCC------HH
Q psy5702 7 GDTVEDVGAEVRSWVINK-HHGETPLHRAARLGYI----DAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGW------LD 75 (235)
Q Consensus 7 ~~~~~~~~~~~~~~~~~d-~~g~~~L~~A~~~~~~----~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~------~~ 75 (235)
.+.+..+...+. +.++ ..|+||||+|+..++. +++++|++. |++++.+|..|.||||+|+..++ .+
T Consensus 19 ~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~ 95 (186)
T 3t8k_A 19 YEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPLFQGGGNDITGTTE 95 (186)
T ss_dssp HHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCcchhhHHH
Confidence 344555555443 3355 7899999999999975 589999998 99999999999999999999886 58
Q ss_pred HHHHHHhcCCCCCCCCCCCC-cHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHH-cCCCCcchhhhhhhccCCCch
Q psy5702 76 IARLLLMYGADPSDSAIGGI-RPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLS-YGADPLLASYAVYFLSLPSRP 153 (235)
Q Consensus 76 ~v~~Ll~~g~~~~~~~~~g~-t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~t~ 153 (235)
++++|++.|++++.+|..|. ||||+|+..+..+. +..+++++|++ +|++++..+ ..|.||
T Consensus 96 iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~------------~~~~iv~~Ll~~~gad~~~~d------~~G~Tp 157 (186)
T 3t8k_A 96 LCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN------------EMIPLYKLIFSQSGLQLLIKD------KWGLTA 157 (186)
T ss_dssp HHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHH------------HHHHHHHHHHTSTTCCTTCCC------TTSCCH
T ss_pred HHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChh------------hHHHHHHHHHHhcCCCCcccC------CCCCCH
Confidence 89999999999999999999 99999988554321 23467899999 999999999 899999
Q ss_pred HHHHHhcCCHHHHHHHHHCCCCCCCcc
Q psy5702 154 LHDAAEKGCVEMVRLLLSYGADPLLAS 180 (235)
Q Consensus 154 L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 180 (235)
||+|+..++.+++++|.+...+++.++
T Consensus 158 L~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 999999999999999998765555544
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.6e-24 Score=148.62 Aligned_cols=123 Identities=40% Similarity=0.552 Sum_probs=113.2
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy5702 60 AGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLL 139 (235)
Q Consensus 60 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~ 139 (235)
+|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~-----------------~~~~~~~Ll~~g~~~~~ 63 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG-----------------HLEVVKLLLEAGADVNA 63 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHT-----------------CHHHHHHHHHTTCCTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC-----------------cHHHHHHHHHcCCCCcc
Confidence 4899999999999999999999999999999999999999987765 45667888999999988
Q ss_pred hhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 140 ASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 140 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++++++...
T Consensus 64 ~~------~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 64 KD------KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp CC------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cC------CCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 87 7899999999999999999999999999999999999999999999999999887654
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=6.6e-25 Score=172.86 Aligned_cols=141 Identities=19% Similarity=0.071 Sum_probs=114.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCC------CCCCCCcHHHHHHhc---CCHHHHHHHHhcCCCCCCCCCCCC
Q psy5702 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAP------KDNAGYTPLHEAASH---GWLDIARLLLMYGADPSDSAIGGI 95 (235)
Q Consensus 25 ~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~ 95 (235)
..+.++|+.|+..++.+.++.|++. +.+++. .+..|.||||+|+.. ++.+++++|++.|++++.+|..|.
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 3345679999999999999999977 777776 588899999999987 889999999999999999999999
Q ss_pred cHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCC
Q psy5702 96 RPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGAD 175 (235)
Q Consensus 96 t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~ 175 (235)
||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++
T Consensus 228 TpLh~A~~~g-----------------~~~~v~~Ll~~gad~~~~d------~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 228 TALHYAALYN-----------------QPDCLKLLLKGRALVGTVN------EAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp CHHHHHHHTT-----------------CHHHHHHHHHTTCCCSCCC------TTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHcC-----------------CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 9999977664 4566777889999998888 7899999999999999999999998876
Q ss_pred CCCccccCCChhhhccchhh
Q psy5702 176 PLLASYAGHTPLSITSDETT 195 (235)
Q Consensus 176 ~~~~~~~g~t~l~~a~~~~~ 195 (235)
.|.||||+|+..+.
T Consensus 285 ------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 285 ------TFAFPLHVDYSWVI 298 (301)
T ss_dssp ------TTSSCCC-------
T ss_pred ------CCCChhHHHHhcCC
Confidence 47899999987654
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=5.6e-25 Score=161.17 Aligned_cols=140 Identities=27% Similarity=0.201 Sum_probs=123.8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHH
Q psy5702 24 KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSA-IGGIRPLHDAA 102 (235)
Q Consensus 24 d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~a~ 102 (235)
+..|.||||+|+..|+.+++++|++ +.+++..|..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578899999999999999999998 77889999999999999999999999999999999999988 88999999987
Q ss_pred HhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCcccc
Q psy5702 103 EKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYA 182 (235)
Q Consensus 103 ~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 182 (235)
..+ +.+++++|+++|++++..+ ..|.||||+|++.++. ..
T Consensus 119 ~~~-----------------~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~-----------------~~ 158 (183)
T 3deo_A 119 GYV-----------------RPEVVEALVELGADIEVED------ERGLTALELAREILKT-----------------TP 158 (183)
T ss_dssp HTT-----------------CHHHHHHHHHHTCCTTCCC------TTSCCHHHHHHHHHHT-----------------CC
T ss_pred hcC-----------------cHHHHHHHHHcCCCCcCCC------CCCCCHHHHHHHhccC-----------------cc
Confidence 765 4566788899999999888 8999999999875332 34
Q ss_pred CCChhhhccchhhHHHHHHhhcc
Q psy5702 183 GHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 183 g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
+.+|+++|++.+..++++.+...
T Consensus 159 ~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 159 KGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHcCHHHHHHHHHHh
Confidence 78999999999999999887653
No 93
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=3.5e-25 Score=158.08 Aligned_cols=128 Identities=27% Similarity=0.374 Sum_probs=115.3
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcC
Q psy5702 55 APKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYG 134 (235)
Q Consensus 55 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g 134 (235)
+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+ . |+.+++++|+++|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~-----------------~~~~~v~~Ll~~g 67 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-M-----------------GSARVAELLLLHG 67 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-T-----------------TCHHHHHHHHTTT
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-c-----------------CCHHHHHHHHHcC
Confidence 456788999999999999999999999999999999999999999863 3 4667788899999
Q ss_pred CCCcchhhhhhhccCCCc-hHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccc
Q psy5702 135 ADPLLASYAVYFLSLPSR-PLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADV 206 (235)
Q Consensus 135 ~~~~~~~~~~~~~~~~~t-~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~ 206 (235)
++++..+ ..|.| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++++...
T Consensus 68 ~~~~~~d------~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 68 AEPNCAD------PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134 (156)
T ss_dssp CCCCCCC------TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC
T ss_pred CCCCCcC------CCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 9999888 78998 999999999999999999999999999999999999999999999999987763
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=3.9e-25 Score=166.79 Aligned_cols=131 Identities=28% Similarity=0.347 Sum_probs=60.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHh
Q psy5702 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY-GADPSDSAIGGIRPLHDAAEK 104 (235)
Q Consensus 26 ~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~a~~~ 104 (235)
.|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred ccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 344555555555555555555554 444555555555555555555555555555554 555555555555555554433
Q ss_pred CChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCcc
Q psy5702 105 GCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLAS 180 (235)
Q Consensus 105 ~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 180 (235)
+ +.+++++|+++|++++..+ ..|.||||+|+..++.++++.|++.|+.....+
T Consensus 151 ~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 151 G-----------------YADIVQLLLAKGARTDLRN------IEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp T-----------------CHHHHHHHHHHTCCSCCCC------TTSCCHHHHCCSHHHHHHHC-------------
T ss_pred C-----------------CHHHHHHHHHcCCCCcccc------CCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 2 2233444455555554444 445555555555555555555555554444433
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.1e-24 Score=166.84 Aligned_cols=139 Identities=27% Similarity=0.210 Sum_probs=123.2
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHH
Q psy5702 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSA-IGGIRPLHDAAE 103 (235)
Q Consensus 25 ~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~a~~ 103 (235)
..|.||||+|++.|+.++++.|++ +.+++.+|..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 468899999999999999999998 67899999999999999999999999999999999999988 889999999877
Q ss_pred hCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccC
Q psy5702 104 KGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAG 183 (235)
Q Consensus 104 ~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 183 (235)
.+ +.+++++|+++|++++..+ ..|.||||+|+..+. ...+
T Consensus 121 ~g-----------------~~~~v~~Ll~~ga~~~~~d------~~g~t~l~~A~~~~~-----------------~~~~ 160 (244)
T 3ui2_A 121 YV-----------------RPEVVEALVELGADIEVED------ERGLTALELAREILK-----------------TTPK 160 (244)
T ss_dssp TT-----------------CHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHHHT-----------------TCCC
T ss_pred cC-----------------CHHHHHHHHHCCCCCCCCC------CCCCcHHHHHHHHHh-----------------ccCC
Confidence 65 4566788899999999888 899999999986322 2468
Q ss_pred CChhhhccchhhHHHHHHhhcc
Q psy5702 184 HTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 184 ~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.|||++|+..+..++++.+...
T Consensus 161 ~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 161 GNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHh
Confidence 8999999999999999888764
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=5.5e-24 Score=145.80 Aligned_cols=117 Identities=28% Similarity=0.327 Sum_probs=102.9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy5702 24 KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAE 103 (235)
Q Consensus 24 d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~ 103 (235)
+..|.+|||+|+..|+.+++++|++. +.+++..|..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 56788999999999999999999998 78899999999999999999999999999999999999999999999999887
Q ss_pred hCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHH
Q psy5702 104 KGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVE 164 (235)
Q Consensus 104 ~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 164 (235)
.+ +.+++++|+++|++++..+ ..|.||||+|...+..+
T Consensus 83 ~~-----------------~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 83 EG-----------------HVSCVKLLLSKGADKTVKG------PDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHCCCHHHHH
T ss_pred cC-----------------CHHHHHHHHHcCCCCCCcC------CCCCCHHHHhCCHHHHH
Confidence 65 4566788899999999888 89999999995444333
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=4.8e-24 Score=160.84 Aligned_cols=129 Identities=25% Similarity=0.265 Sum_probs=111.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHc-CCC
Q psy5702 58 DNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSY-GAD 136 (235)
Q Consensus 58 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~-g~~ 136 (235)
+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++ .+++++|++. |++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-----------------~~~v~~Ll~~~g~~ 132 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGH-----------------KDIVEMLFTQPNIE 132 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-----------------HHHHHHHTTSTTCC
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCC-----------------HHHHHHHHcCCCCC
Confidence 4568999999999999999999999999999999999999999887654 4667778888 999
Q ss_pred CcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCC
Q psy5702 137 PLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGH 209 (235)
Q Consensus 137 ~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~ 209 (235)
++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..++++.++......
T Consensus 133 ~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 133 LNQQN------KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp CCCCC------TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred ccccC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 99888 79999999999999999999999999999999999999999999999999999887665443
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=1.2e-26 Score=187.61 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=21.3
Q ss_pred cCCChhhhccchhhHHHHHHhhccccCCCCCcccccCCCcccccccccCCCCCC
Q psy5702 182 AGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQMVGYEPLAK 235 (235)
Q Consensus 182 ~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (235)
.+.|||++|+..+..++++.++.... -.+..+.+.++.++..|+.++.+
T Consensus 318 ~~~~~L~~A~~~g~~e~v~lLl~~~~-----v~~~~~~~~~~~~~~~~~~~~~~ 366 (376)
T 2aja_A 318 DANELLRLALRLGNQGACALLLSIPS-----VLALTKANNYYINETGGRLDLRA 366 (376)
T ss_dssp CCCHHHHHHHHHTCTTHHHHHTTSHH-----HHHSCC-----------------
T ss_pred CccHHHHHHHHcCcHHHHHHHHcChH-----HHHHHHHhccccccccccccHHH
Confidence 35577888888888888888876422 22344556677788888877653
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=1e-22 Score=171.00 Aligned_cols=137 Identities=20% Similarity=0.106 Sum_probs=114.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCC------CCCCCcHHHHHHh---cCCHHHHHHHHhcCCCCCCCCCCCC
Q psy5702 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPK------DNAGYTPLHEAAS---HGWLDIARLLLMYGADPSDSAIGGI 95 (235)
Q Consensus 25 ~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~g~ 95 (235)
....+.||.|+..|+.+.++.|++. +.+++.. +..|.||||+|+. .|+.+++++|++.|++++.+|..|.
T Consensus 130 ~~~~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~ 208 (497)
T 3lvq_E 130 TPEPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 208 (497)
T ss_dssp C-CHHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSC
T ss_pred cccHHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCC
Confidence 3344689999999999999999998 7888776 8899999999976 8999999999999999999999999
Q ss_pred cHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCC
Q psy5702 96 RPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGAD 175 (235)
Q Consensus 96 t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~ 175 (235)
||||+|+..| +.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 209 TpLh~A~~~g-----------------~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 209 TALHYAALYN-----------------QPDCLKLLLKGRALVGTVN------EAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp CHHHHHTTTT-----------------CHHHHHHHHHTCCCCSCCC------TTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred cHHHHHHHcC-----------------CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999987765 5566788899999999998 8999999999999999999999999999
Q ss_pred CCCccccCCChhhhcc
Q psy5702 176 PLLASYAGHTPLSITS 191 (235)
Q Consensus 176 ~~~~~~~g~t~l~~a~ 191 (235)
++.. |+|.+.
T Consensus 266 ~~~~------~~h~~~ 275 (497)
T 3lvq_E 266 TFAF------PLHVDY 275 (497)
T ss_dssp ----------------
T ss_pred CCCC------cceeec
Confidence 9874 555544
No 100
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=9.7e-26 Score=182.30 Aligned_cols=151 Identities=15% Similarity=0.065 Sum_probs=114.8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCC---CCCCCCCCcHH
Q psy5702 24 KHHGETPLHRAARLGYIDAVAYCLEKFSHG--PAPKDNAGYTPLHEAASHGWLDIARLLLMYGADP---SDSAIGGIRPL 98 (235)
Q Consensus 24 d~~g~~~L~~A~~~~~~~~v~~li~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l 98 (235)
+.++.||||+|++.|+.+++++|++.+... .+..+..|.||||+|+..|+.+++++|++.|+++ +..+.. .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 344569999999999999999999873311 1234456888999999999999999999999763 222221 4555
Q ss_pred HHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcc--hhhhhhhccCCCchHHHHH-hcCCHHHHHHHHHCCCC
Q psy5702 99 HDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLL--ASYAVYFLSLPSRPLHDAA-EKGCVEMVRLLLSYGAD 175 (235)
Q Consensus 99 ~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~t~L~~A~-~~~~~~~v~~Ll~~ga~ 175 (235)
|+ |+..|+.+++++|+++|++++. .+ ..|.||||+|+ ..|+.+++++|+++|+
T Consensus 168 h~-----------------Aa~~G~~eiv~~Ll~~ga~~~~~~~d------~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga- 223 (376)
T 2aja_A 168 RL-----------------AAENGHLHVLNRLCELAPTEATAMIQ------AENYYAFRWAAVGRGHHNVINFLLDCPV- 223 (376)
T ss_dssp HH-----------------HHHTTCHHHHHHHHHSCGGGHHHHHH------HHHHHHHHHHHSTTCCHHHHHHHTTSHH-
T ss_pred HH-----------------HHHCCCHHHHHHHHHcCCccchhccC------CCCCCHHHHHHHHCCCHHHHHHHHhCCC-
Confidence 55 5556677788889999998776 55 56889999999 9999999999999874
Q ss_pred CCCccccCCChhhhccchhhHHHHHHhhcc
Q psy5702 176 PLLASYAGHTPLSITSDETTRKLLQYHLAD 205 (235)
Q Consensus 176 ~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~ 205 (235)
.|.||+++|+..+..++++++...
T Consensus 224 ------~~~taL~~Aa~~g~~evv~lL~~~ 247 (376)
T 2aja_A 224 ------MLAYAEIHEFEYGEKYVNPFIARH 247 (376)
T ss_dssp ------HHHHHHHCTTTTTTTTHHHHHHHH
T ss_pred ------ccchHHHHHHHCCCHHHHHHHHhc
Confidence 388999999998877777766554
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.9e-22 Score=157.15 Aligned_cols=121 Identities=21% Similarity=0.123 Sum_probs=59.1
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCC------CCCCCCCCCcHHHHHHhc---CCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy5702 30 PLHRAARLGYIDAVAYCLEKFSHG------PAPKDNAGYTPLHEAASH---GWLDIARLLLMYGADPSDSAIGGIRPLHD 100 (235)
Q Consensus 30 ~L~~A~~~~~~~~v~~li~~~~~~------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 100 (235)
+|+.|+..++.+.+..+++. +.+ ++..+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||||+
T Consensus 133 ~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 45555555555555555544 333 222244455555555554 44555555555555555555555555555
Q ss_pred HHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCC
Q psy5702 101 AAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGA 174 (235)
Q Consensus 101 a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga 174 (235)
|+..| +.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+
T Consensus 212 A~~~g-----------------~~~~v~~Ll~~gad~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 212 CCLTD-----------------NAECLKLLLRGKASIEIAN------ESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHTT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHcC-----------------CHHHHHHHHHcCCCCCCcc------CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44332 2233444455555555444 445555555555555555555555444
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=1.1e-22 Score=163.84 Aligned_cols=148 Identities=26% Similarity=0.242 Sum_probs=114.1
Q ss_pred eecCCCCcHHHHHHHc-CCHHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy5702 22 INKHHGETPLHRAARL-GYIDAVAYCLEKFSHGPAPKD--NAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPL 98 (235)
Q Consensus 22 ~~d~~g~~~L~~A~~~-~~~~~v~~li~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 98 (235)
+.+..+.++||.|+.. ++.++++.|++. +.+++..+ ..|.||||+|+..|+.+++++|++.|++++..|..|.|||
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPL 272 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 3445566899999999 999999999998 88898888 8899999999999999999999999999999999999999
Q ss_pred HHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCC---CC
Q psy5702 99 HDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG---AD 175 (235)
Q Consensus 99 ~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g---a~ 175 (235)
|+|+..+ +.+++++|+++|++++..+ ..|.||||+|+..++.+++++|++.+ ++
T Consensus 273 h~A~~~g-----------------~~~~v~~LL~~Gad~~~~d------~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~ 329 (368)
T 3jue_A 273 HHATILG-----------------HTGLACLFLKRGADLGARD------SEGRDPLTIAMETANADIVTLLRLAKMREAE 329 (368)
T ss_dssp HHHHHHT-----------------CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHC----
T ss_pred HHHHHcC-----------------cHHHHHHHHHCcCCCCCcC------CCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 9987765 4566788899999999888 78999999999999999999999865 44
Q ss_pred CCCccccCCChhhhccch
Q psy5702 176 PLLASYAGHTPLSITSDE 193 (235)
Q Consensus 176 ~~~~~~~g~t~l~~a~~~ 193 (235)
....+..+.|+++++...
T Consensus 330 ~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 330 AAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp ------------------
T ss_pred ccccCCCCCCHHHHHHHH
Confidence 445666788888877653
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=1.8e-21 Score=151.55 Aligned_cols=172 Identities=18% Similarity=0.093 Sum_probs=135.8
Q ss_pred ecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCC----CC--------------------------CCCCCCcHHHHHHhcC
Q psy5702 23 NKHHGETPLHRAARLGYIDAVAYCLEKFSHGP----AP--------------------------KDNAGYTPLHEAASHG 72 (235)
Q Consensus 23 ~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~----~~--------------------------~~~~g~t~L~~A~~~~ 72 (235)
.|..+.+.++.+...|+..+.+++........ .. ......++|+.|+..+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 45667778888888888766555432211000 00 0011245799999999
Q ss_pred CHHHHHHHHhcCCCC------CCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhh
Q psy5702 73 WLDIARLLLMYGADP------SDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYF 146 (235)
Q Consensus 73 ~~~~v~~Ll~~g~~~------~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 146 (235)
+.+.++.+++.|+++ +..+..|.||||+|+..++. ++.+++++|+++|++++..+
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~--------------~~~~~v~~Ll~~ga~in~~d----- 202 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDR--------------TSLHIVDFLVQNSGNLDKQT----- 202 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCT--------------TTHHHHHHHHHHCSCTTCCC-----
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhccc--------------chHHHHHHHHHCCCCccccC-----
Confidence 999999999999994 44578899999998877321 45677888999999999888
Q ss_pred ccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcc
Q psy5702 147 LSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKW 214 (235)
Q Consensus 147 ~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~ 214 (235)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.++.....+....+
T Consensus 203 -~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 269 (278)
T 1dcq_A 203 -GKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHV 269 (278)
T ss_dssp -TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCSSC
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcce
Confidence 7999999999999999999999999999999999999999999999999999888877665555443
No 104
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=2.1e-22 Score=147.45 Aligned_cols=114 Identities=27% Similarity=0.152 Sum_probs=103.2
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCC
Q psy5702 58 DNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADP 137 (235)
Q Consensus 58 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~ 137 (235)
+..|.||||+|+..|+.++++.|++ |++++.+|..|.||||+|+..+ +.+++++|+++|+++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~-----------------~~~~v~~Ll~~ga~~ 102 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLG-----------------SDKCVRLLAEAGADL 102 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHT-----------------CHHHHHHHHHTTCCT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcCCCC
Confidence 3578999999999999999999999 9999999999999999988765 456678889999998
Q ss_pred cchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchh
Q psy5702 138 LLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDET 194 (235)
Q Consensus 138 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~ 194 (235)
+..+. ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 103 ~~~~~-----~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 103 DHRDM-----RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp TCCCS-----SSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred CcCCC-----CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 87652 57999999999999999999999999999999999999999998753
No 105
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=4.8e-22 Score=156.55 Aligned_cols=143 Identities=17% Similarity=0.038 Sum_probs=118.4
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcC
Q psy5702 61 GYTPLHEAASHGWLDIARLLLMYGADPSD------SAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYG 134 (235)
Q Consensus 61 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g 134 (235)
..++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+..+. .++.+++++|+++|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~--------------~~~~~iv~~Ll~~g 216 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVAN--------------QASLPLVDFIIQNG 216 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCC--------------TTTHHHHHHHHHHS
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcc--------------cCcHHHHHHHHhcC
Confidence 45679999999999999999999999988 68899999999887632 14667889999999
Q ss_pred CCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccccCCCCCcc
Q psy5702 135 ADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKW 214 (235)
Q Consensus 135 ~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~ 214 (235)
++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.++.....
T Consensus 217 advn~~d------~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------ 284 (301)
T 2b0o_E 217 GHLDAKA------ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------ 284 (301)
T ss_dssp SCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------
T ss_pred CCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------
Confidence 9999888 7999999999999999999999999999999999999999999998888888887765332
Q ss_pred cccCCCcccccccccCC
Q psy5702 215 DFAGPASCFDKQMVGYE 231 (235)
Q Consensus 215 ~~~~~~~~~~~~~~g~~ 231 (235)
.+.+++..+...||.
T Consensus 285 --~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 --TFAFPLHVDYSWVIS 299 (301)
T ss_dssp --TTSSCCC--------
T ss_pred --CCCChhHHHHhcCCc
Confidence 456777777777775
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.8e-21 Score=126.56 Aligned_cols=75 Identities=47% Similarity=0.638 Sum_probs=36.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy5702 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAA 102 (235)
Q Consensus 27 g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~ 102 (235)
|+||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 76 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 44455555555555555544444 4444444444555555555554444444444444444444444444444433
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=3.6e-21 Score=125.17 Aligned_cols=81 Identities=36% Similarity=0.436 Sum_probs=67.5
Q ss_pred chHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q psy5702 5 SLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 84 (235)
+..+.++.++..+.+++.+|..|.||||+|+..++.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 13 ~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 13 GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 345778888888888888888888888888888888888888887 7778888888888888888888888888888887
Q ss_pred CC
Q psy5702 85 AD 86 (235)
Q Consensus 85 ~~ 86 (235)
++
T Consensus 92 a~ 93 (93)
T 1n0q_A 92 AY 93 (93)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=3.8e-22 Score=134.93 Aligned_cols=109 Identities=38% Similarity=0.446 Sum_probs=70.2
Q ss_pred CCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCC
Q psy5702 56 PKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGA 135 (235)
Q Consensus 56 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~ 135 (235)
.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+ +.+++++|+++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~-----------------~~~~~~~Ll~~g~ 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNG-----------------HAEIVKLLLAKGA 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTT-----------------CHHHHHHHTTTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-----------------cHHHHHHHHHcCC
Confidence 34566666666666666666666666666666666666666666655443 3344555666666
Q ss_pred CCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChh
Q psy5702 136 DPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPL 187 (235)
Q Consensus 136 ~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 187 (235)
+++..+ ..|.||||+|+..++.+++++|+++|++++.++..|.||-
T Consensus 67 ~~~~~d------~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 DVNARS------KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CTTCCC------TTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCcccC------CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 666555 5677777777777777777777777777777777776663
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=1.7e-21 Score=148.97 Aligned_cols=130 Identities=21% Similarity=0.168 Sum_probs=116.2
Q ss_pred cchHHHHHHHhhhhceeEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHh
Q psy5702 4 QSLGDTVEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKD-NAGYTPLHEAASHGWLDIARLLLM 82 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~ 82 (235)
.+..+.++.++. +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.++ ..|.||||+|+..|+.+++++|++
T Consensus 55 ~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 132 (244)
T 3ui2_A 55 KADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132 (244)
T ss_dssp TTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345678899998 999999999999999999999999999999998 88898888 789999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCC
Q psy5702 83 YGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGC 162 (235)
Q Consensus 83 ~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 162 (235)
.|++++.++..|.||||+|+..++. ..+.|||++|+..|+
T Consensus 133 ~ga~~~~~d~~g~t~l~~A~~~~~~----------------------------------------~~~~~~l~~a~~~g~ 172 (244)
T 3ui2_A 133 LGADIEVEDERGLTALELAREILKT----------------------------------------TPKGNPMQFGRRIGL 172 (244)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHHTT----------------------------------------CCCSSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHhc----------------------------------------cCCCCHHHHHHHcCh
Confidence 9999999999999999998753110 357799999999999
Q ss_pred HHHHHHHHHCCCC
Q psy5702 163 VEMVRLLLSYGAD 175 (235)
Q Consensus 163 ~~~v~~Ll~~ga~ 175 (235)
.+++++|++++.+
T Consensus 173 ~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 173 EKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHEE
T ss_pred HHHHHHHHHhccc
Confidence 9999999987544
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=1.4e-21 Score=132.13 Aligned_cols=110 Identities=36% Similarity=0.448 Sum_probs=97.4
Q ss_pred eEeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy5702 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLH 99 (235)
Q Consensus 20 ~~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 99 (235)
..++|..|+||||+|+..++.+++++|++. +.+++..|..|.||||+|+..++.+++++|++.|++++.++..|.||||
T Consensus 2 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 2 HMWGSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp --CCSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 356899999999999999999999999998 8889999999999999999999999999999999999999999999999
Q ss_pred HHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcCCCCcchhhhhhhccCCCch
Q psy5702 100 DAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRP 153 (235)
Q Consensus 100 ~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~ 153 (235)
+|+..+ +.+++++|+++|++++..+ ..+.+|
T Consensus 81 ~A~~~~-----------------~~~~~~~Ll~~ga~~n~~~------~~~~~~ 111 (115)
T 2l6b_A 81 LAKKNG-----------------HHEIVKLLDAKGADVNARS------WGSSHH 111 (115)
T ss_dssp HHHTTT-----------------CHHHHHHHHTTSSSHHHHS------CCCC--
T ss_pred HHHHCC-----------------CHHHHHHHHHcCCCCCcCC------cccccc
Confidence 977664 5567788899999998887 666665
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=3.7e-21 Score=155.02 Aligned_cols=127 Identities=24% Similarity=0.221 Sum_probs=113.6
Q ss_pred CCCCCCcHHHHHHhc-CCHHHHHHHHhcCCCCCCCC--CCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHc
Q psy5702 57 KDNAGYTPLHEAASH-GWLDIARLLLMYGADPSDSA--IGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSY 133 (235)
Q Consensus 57 ~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~ 133 (235)
.+..+.++||.|+.. ++.++++.|++.|++++..+ ..|.||||+|+..+ +.+++++|+++
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g-----------------~~~iv~~LL~~ 257 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAAN-----------------SLLACEFLLQN 257 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTT-----------------CHHHHHHHHHT
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCC-----------------CHHHHHHHHHc
Confidence 334567899999999 99999999999999999988 88999999987764 55667888999
Q ss_pred CCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhccc
Q psy5702 134 GADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADV 206 (235)
Q Consensus 134 g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~ 206 (235)
|++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.+....
T Consensus 258 Gadvn~~d------~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 258 GANVNQAD------SAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCC------CCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999888 79999999999999999999999999999999999999999999998888888876554
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.5e-20 Score=157.84 Aligned_cols=127 Identities=18% Similarity=0.082 Sum_probs=113.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhcCCCCCCC------CCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcC
Q psy5702 61 GYTPLHEAASHGWLDIARLLLMYGADPSDS------AIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYG 134 (235)
Q Consensus 61 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g 134 (235)
..+.||.|+..|+.+.++.|++.|++++.. +..|.||||+|+... ..|+.+++++|+++|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a--------------~~g~~~~v~~Ll~~g 197 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVA--------------NQASLPLVDFIIQNG 197 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTC--------------CTTTHHHHHHHHHHS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhc--------------ccccHHHHHHHHHcC
Confidence 446799999999999999999999999887 889999999987621 235678889999999
Q ss_pred CCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCccccCCChhhhccchhhHHHHHHhhcccc
Q psy5702 135 ADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVR 207 (235)
Q Consensus 135 ~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~l~~~~~~~~ 207 (235)
++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..++++.++....
T Consensus 198 a~vn~~d------~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 198 GHLDAKA------ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp CCTTCCC------SSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred CCCCccC------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999988 899999999999999999999999999999999999999999999888888887766543
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=4.3e-19 Score=118.93 Aligned_cols=92 Identities=30% Similarity=0.361 Sum_probs=84.1
Q ss_pred EeecCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy5702 21 VINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHD 100 (235)
Q Consensus 21 ~~~d~~g~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 100 (235)
.-.|.+|.++||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34677899999999999999999999998 88899999999999999999999999999999999999999999999999
Q ss_pred HHHhCChhHHHHh
Q psy5702 101 AAEKGCVEMVRLL 113 (235)
Q Consensus 101 a~~~~~~~~~~~l 113 (235)
|+..++.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999888765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=9.8e-18 Score=112.26 Aligned_cols=92 Identities=30% Similarity=0.389 Sum_probs=70.7
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCChhHHHHhHHHHHHHcCCHHHHHHHHHcC
Q psy5702 55 APKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYG 134 (235)
Q Consensus 55 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~l~~a~~~~~~~~~~~l~~~g 134 (235)
...+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..+ +.+++++|+++|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~-----------------~~~~v~~Ll~~g 80 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNG-----------------HLEVVKLLLEAG 80 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT-----------------CHHHHHHHHHTT
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-----------------CHHHHHHHHHcC
Confidence 346678888888888888888888888888888888888888888866654 445567778888
Q ss_pred CCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHH
Q psy5702 135 ADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLL 169 (235)
Q Consensus 135 ~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~L 169 (235)
++++..+ ..|.||||+|+..++.+++++|
T Consensus 81 a~~~~~d------~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 81 ADVXAQD------KFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTCCC------TTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCccccc------cCCCcHHHHHHHcCCHHHHHHh
Confidence 8877777 6788888888888888888775
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=50.14 E-value=15 Score=18.46 Aligned_cols=17 Identities=35% Similarity=0.362 Sum_probs=13.2
Q ss_pred HHHHHhcCCHHHHHHHH
Q psy5702 65 LHEAASHGWLDIARLLL 81 (235)
Q Consensus 65 L~~A~~~~~~~~v~~Ll 81 (235)
+..||+.|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 57788888888887763
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=49.94 E-value=63 Score=22.61 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=70.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCCCCCCCCCCCCc-HHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q psy5702 28 ETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYT-PLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGC 106 (235)
Q Consensus 28 ~~~L~~A~~~~~~~~v~~li~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 106 (235)
.+=+-.|...|+.+....+.+... +...+. .=..|...|+.++++...+.-.|+. ..+......|+
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~tg~ 75 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLN------DSITWERLIQEALAQGNASLAEMIYQTQHSFD-------KLSFLYLVTGD 75 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHHHTC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhC------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHHhCC
Confidence 356788999999988877766521 111111 1256788899999988887754542 23344455566
Q ss_pred hhHHHHh------------HHHHHHHcCCHH-HHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHH
Q psy5702 107 VEMVRLL------------PLHDAAEKGCVE-MVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLS 171 (235)
Q Consensus 107 ~~~~~~l------------~l~~a~~~~~~~-~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~ 171 (235)
.+-++.+ .++.+...|+.+ ++++|++.|.- .-+...|-.+|..+..+-+++
T Consensus 76 ~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~--------------~eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 76 VNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSL--------------PLAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH--------------HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh--------------HHHHHHHHHcCcHHHHHHHHH
Confidence 6555444 455555556554 55555543321 134556667788887777665
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=45.69 E-value=72 Score=26.36 Aligned_cols=128 Identities=16% Similarity=0.083 Sum_probs=66.0
Q ss_pred HHHHHHHcCCHHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHhcC-C-------------HHHHHHHHhcCCCCCCCCC
Q psy5702 30 PLHRAARLGYIDAVAYCLEK---FSHGPAPKDNAGYTPLHEAASHG-W-------------LDIARLLLMYGADPSDSAI 92 (235)
Q Consensus 30 ~L~~A~~~~~~~~v~~li~~---~~~~~~~~~~~g~t~L~~A~~~~-~-------------~~~v~~Ll~~g~~~~~~~~ 92 (235)
.|..+++.|+++-+..+++. .|.. .|..-.+.|..++... . .++.+.+.+.|..++...
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M~~~Gv~---pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t- 107 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEARRNGVQ---LSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT- 107 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHHTCC---CCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH-
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHcCCC---CCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH-
Confidence 35566677876555444432 1332 2233344444444321 1 245566666776665332
Q ss_pred CCCcHHHHHHHhCChhHHHHh------------------HHHHHHHcCCHH----HHHHHHHcCCCCcchhhhhhhccCC
Q psy5702 93 GGIRPLHDAAEKGCVEMVRLL------------------PLHDAAEKGCVE----MVRLLLSYGADPLLASYAVYFLSLP 150 (235)
Q Consensus 93 ~g~t~l~~a~~~~~~~~~~~l------------------~l~~a~~~~~~~----~~~~l~~~g~~~~~~~~~~~~~~~~ 150 (235)
..+.+...+..|..+-...+ .+...+..|..+ +++.+.+.|..++...+.
T Consensus 108 -yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~------- 179 (501)
T 4g26_A 108 -FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELA------- 179 (501)
T ss_dssp -HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHH-------
T ss_pred -HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHH-------
Confidence 11233444555655443322 344555666654 344455678777766542
Q ss_pred CchHHHHHhcCCHHHHHHHH
Q psy5702 151 SRPLHDAAEKGCVEMVRLLL 170 (235)
Q Consensus 151 ~t~L~~A~~~~~~~~v~~Ll 170 (235)
+.+...++.|..+-+.-++
T Consensus 180 -~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 180 -ALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp -HHHHHHHHTTCHHHHHHHH
T ss_pred -HHHHHHhhCCCHHHHHHHH
Confidence 4567777778765544443
No 118
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=40.29 E-value=28 Score=21.06 Aligned_cols=44 Identities=16% Similarity=0.110 Sum_probs=28.0
Q ss_pred HHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCC
Q psy5702 124 VEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLL 178 (235)
Q Consensus 124 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 178 (235)
.+.++.|++.|....... .+| .+...+....++||+++..+++.
T Consensus 22 ~~~I~qL~~MGF~~~~a~----------~AL-~~~n~n~e~A~ewL~~h~~D~D~ 65 (85)
T 2dkl_A 22 SRLIKQLTDMGFPREPAE----------EAL-KSNNMNLDQAMSALLEKKVDVDK 65 (85)
T ss_dssp HHHHHHHHHHTCCHHHHH----------HHH-HHTTSCHHHHHHHHHTTSCCSSC
T ss_pred HHHHHHHHHcCCCHHHHH----------HHH-HHcCCCHHHHHHHHHHCcCCccc
Confidence 456788888887643332 445 33334445678999998877654
No 119
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=39.08 E-value=31 Score=20.83 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=28.0
Q ss_pred CHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCc
Q psy5702 123 CVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLA 179 (235)
Q Consensus 123 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 179 (235)
+.+.++.|++.|..-.... .+|..+.-.+-...++||+++..+.++.
T Consensus 29 ~e~~v~~L~~MGF~~~~a~----------~AL~~t~n~n~e~A~ewL~~h~~d~d~d 75 (84)
T 1vek_A 29 NEEIVAQLVSMGFSQLHCQ----------KAAINTSNAGVEEAMNWLLSHMDDPDID 75 (84)
T ss_dssp CHHHHHHHHHHTCCHHHHH----------HHHHHTTTCCHHHHHHHHHHHTTCSTTT
T ss_pred CHHHHHHHHHcCCCHHHHH----------HHHHHHcCCCHHHHHHHHHhCCCccccc
Confidence 4567788888887643222 3343332223446789999987666553
No 120
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.42 E-value=44 Score=19.54 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=28.3
Q ss_pred CHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhc-CCHHHHHHHHHCCCCCCC
Q psy5702 123 CVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEK-GCVEMVRLLLSYGADPLL 178 (235)
Q Consensus 123 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~ 178 (235)
..+.++.|++.|....... .+|. ++.+ +....++||+++..+.++
T Consensus 9 ~e~~v~~L~~MGF~~~~a~----------~AL~-~t~n~~ve~A~ewL~~~~~d~d~ 54 (74)
T 2dag_A 9 DESVIIQLVEMGFPMDACR----------KAVY-YTGNSGAEAAMNWVMSHMDDPDF 54 (74)
T ss_dssp CHHHHHHHHHHSCCHHHHH----------HHHH-HHTSCCHHHHHHHHHHHTTSTTS
T ss_pred CHHHHHHHHHcCCCHHHHH----------HHHH-HhCCCCHHHHHHHHHhCCCCccc
Confidence 4567888888887643222 3443 3332 345688999998766654
No 121
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.73 E-value=1.3e+02 Score=24.27 Aligned_cols=49 Identities=20% Similarity=0.155 Sum_probs=36.3
Q ss_pred HHHcCCHHHHHHHHHhCCCCCC-----------CC--CCCCCcHHHHHHhcCCHHHHHHHHh
Q psy5702 34 AARLGYIDAVAYCLEKFSHGPA-----------PK--DNAGYTPLHEAASHGWLDIARLLLM 82 (235)
Q Consensus 34 A~~~~~~~~v~~li~~~~~~~~-----------~~--~~~g~t~L~~A~~~~~~~~v~~Ll~ 82 (235)
.+..|+...|+..+..+|...- .. -..|.|.+|+|++..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 4467888888888887664331 12 2458899999999999999888886
No 122
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=33.87 E-value=26 Score=19.90 Aligned_cols=45 Identities=24% Similarity=0.245 Sum_probs=26.7
Q ss_pred HHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhc-CCHHHHHHHHHCCCCCCCc
Q psy5702 124 VEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEK-GCVEMVRLLLSYGADPLLA 179 (235)
Q Consensus 124 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~ 179 (235)
.+.++.|++.|...+... .+|. ++.+ +....++||+++..+.++.
T Consensus 10 e~~v~~L~~MGF~~~~a~----------~AL~-~t~n~~~e~A~~wL~~h~~d~d~d 55 (64)
T 2crn_A 10 PSLLEPLLAMGFPVHTAL----------KALA-ATGRKTAEEALAWLHDHCNDPSLD 55 (64)
T ss_dssp CSSHHHHHHTSCCHHHHH----------HHHH-HHTSCCHHHHHHHHHHHSSSTTSC
T ss_pred HHHHHHHHHcCCCHHHHH----------HHHH-HhCCCCHHHHHHHHHhCCCCcccc
Confidence 345677888776543222 3343 3333 4556789999987776553
No 123
>4a1x_C CP5-46-A peptide; hydrolase-peptide complex, unmodified inhibitory peptides; 1.90A {Synthetic construct} PDB: 4a1t_C
Probab=31.14 E-value=13 Score=16.08 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=9.0
Q ss_pred ccccccccCCCCC
Q psy5702 222 CFDKQMVGYEPLA 234 (235)
Q Consensus 222 ~~~~~~~g~~~~~ 234 (235)
.+..+..||+|++
T Consensus 7 vylldgpgydpih 19 (26)
T 4a1x_C 7 VYLLDGPGYDPIH 19 (26)
T ss_pred EEEecCCCCCcee
Confidence 3456777888875
No 124
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.57 E-value=52 Score=19.77 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=28.2
Q ss_pred CHHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHhcCCHHHHHHHHHCCCCCCCc
Q psy5702 123 CVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLA 179 (235)
Q Consensus 123 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 179 (235)
+.+.++.|++.|....... .+|.. +..+....++||+++..+.++.
T Consensus 29 ~e~~i~~L~~MGF~~~~a~----------~AL~~-t~~nve~A~ewL~~~~~d~d~d 74 (83)
T 2dai_A 29 DEAALRQLTEMGFPENRAT----------KALQL-NHMSVPQAMEWLIEHAEDPTID 74 (83)
T ss_dssp CHHHHHHHHHHTCCHHHHH----------HHHHH-TTSCHHHHHHHHHHGGGCSTTC
T ss_pred CHHHHHHHHHcCCCHHHHH----------HHHHH-hCCCHHHHHHHHHHCCCCcccc
Confidence 4566788888887643332 44543 3333345789999987666543
No 125
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=28.02 E-value=47 Score=18.75 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=25.7
Q ss_pred HHHHHHHHHcCCCCcchhhhhhhccCCCchHHHHHh-cCCHHHHHHHHHCCCCCCC
Q psy5702 124 VEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAE-KGCVEMVRLLLSYGADPLL 178 (235)
Q Consensus 124 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 178 (235)
.+.++.|++.|..-.... .+|. ++. .+....++||+++..+.+.
T Consensus 10 ~~~v~~L~~MGF~~~~a~----------~AL~-~t~~~nve~A~ewLl~~~~d~d~ 54 (64)
T 1whc_A 10 LTALESLIEMGFPRGRAE----------KALA-LTGNQGIEAAMDWLMEHEDDPDV 54 (64)
T ss_dssp CCHHHHHHTTTCCHHHHH----------HHHH-HHTSCCHHHHHHHHHHHTTCSCT
T ss_pred HHHHHHHHHcCCCHHHHH----------HHHH-HhcCCCHHHHHHHHHhCCCCccc
Confidence 345677787776533222 3443 332 3344578999998766654
Done!