RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5702
(235 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 105 bits (261), Expect = 5e-27
Identities = 60/212 (28%), Positives = 81/212 (38%), Gaps = 60/212 (28%)
Query: 29 TPLHRAARLGYIDAVAYCLEKFSHGPAP--KDNAGYTPLHEAASHGWLDIARLLLMYGAD 86
TPLH A+ +G++ V L+ G +P + TPLH AA G ++A+ LL A
Sbjct: 2 TPLHVASFMGHLPIVKNLLQ---RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK 58
Query: 87 PSDSAIGGIRPLHDAAEKGCVEMVRLL--------------------------------- 113
+ A PLH AA G MV+LL
Sbjct: 59 VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 118
Query: 114 ----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDA 157
PLH AA+ G V + LLL A P A PLH A
Sbjct: 119 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT------PLHVA 172
Query: 158 AEKGCVEMVRLLLSYGADPLLASYAGHTPLSI 189
+++V+LLL G P ++ G+TPL I
Sbjct: 173 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHI 204
Score = 90.8 bits (224), Expect = 6e-22
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
G TPLH AA+ G+ + VA L K ++G + +G TPLH A G + +A +
Sbjct: 224 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL-GNKSGLTPLHLVAQEGHVPVADV 282
Query: 80 LLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGC 123
L+ +G + G PLH A+ G +++V+ L PLH AA++G
Sbjct: 283 LIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH 342
Query: 124 VEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKG---CVEMVRLLLSYGADPLLAS 180
++V LLL GA P S + PL A G ++++++ + L++
Sbjct: 343 TDIVTLLLKNGASPNEVSSD------GTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSD 396
Query: 181 YAGHT 185
+
Sbjct: 397 KHRMS 401
Score = 78.9 bits (193), Expect = 1e-17
Identities = 70/207 (33%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84
G TPLH AA+ G + LE+ +H P G TPLH A H LDI +LLL G
Sbjct: 130 KKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG 188
Query: 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVR 128
P A G PLH AA++ VE+ R L PLH AA++G EMV
Sbjct: 189 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVA 248
Query: 129 LLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLS 188
LLLS A+ L + + PLH A++G V + +L+ +G + G+TPL
Sbjct: 249 LLLSKQANGNLGNKSGL------TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLH 302
Query: 189 ITSDETTRKLLQYHLADVRGHEAPKWD 215
+ S KL+++ L A
Sbjct: 303 VASHYGNIKLVKFLLQHQADVNAKTKL 329
Score = 73.9 bits (180), Expect = 6e-16
Identities = 70/241 (29%), Positives = 99/241 (41%), Gaps = 57/241 (23%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSH-------------------------------- 52
+TPLH AAR+G+ + V LE ++
Sbjct: 64 KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEA 123
Query: 53 GPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRL 112
A G+TPLH AA +G + +A LLL A P+ + G+ PLH A +++V+L
Sbjct: 124 SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKL 183
Query: 113 L----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHD 156
L PLH AA++ VE+ R LL YG S PLH
Sbjct: 184 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV------TPLHL 237
Query: 157 AAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDE---TTRKLLQYHLADVRGHEAPK 213
AA++G EMV LLLS A+ L + +G TPL + + E +L H V
Sbjct: 238 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG 297
Query: 214 W 214
+
Sbjct: 298 Y 298
Score = 73.1 bits (178), Expect = 1e-15
Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 56/214 (26%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84
+G TPLH A +D V L + P GYTPLH AA +++AR LL YG
Sbjct: 163 KNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 221
Query: 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVR 128
+ ++ G+ PLH AA++G EMV LL PLH A++G V +
Sbjct: 222 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVAD 281
Query: 129 LLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMV---------------------- 166
+L+ +G + Y PLH A+ G +++V
Sbjct: 282 VLIKHGVMVDATTRMGY------TPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLH 335
Query: 167 -----------RLLLSYGADPLLASYAGHTPLSI 189
LLL GA P S G TPL+I
Sbjct: 336 QAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAI 369
Score = 71.2 bits (173), Expect = 4e-15
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 14 GAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGW 73
G V + G TPLH A+ G I V + L+ + A K GY+PLH+AA G
Sbjct: 287 GVMVDAT---TRMGYTPLHVASHYGNIKLVKFLLQHQADVNA-KTKLGYSPLHQAAQQGH 342
Query: 74 LDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL 113
DI LLL GA P++ + G PL A G + + +L
Sbjct: 343 TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 55.4 bits (132), Expect = 1e-09
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 10 VEDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAP--KDNAGYTPLHE 67
V+ + G +PLH+AA+ G+ D V L+ +G +P + G TPL
Sbjct: 313 VKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK---NGASPNEVSSDGTTPLAI 369
Query: 68 AASHGWLDIARLLLMYGADPSDSAI 92
A G++ + +L + + S +
Sbjct: 370 AKRLGYISVTDVLKVVTDETSFVLV 394
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 87.6 bits (216), Expect = 5e-21
Identities = 30/219 (13%), Positives = 53/219 (24%), Gaps = 49/219 (22%)
Query: 27 GETPLHRAARLGYIDAVAYCLEK-FSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGA 85
AA G++ + E + A Y AA +G L + L
Sbjct: 126 NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP 185
Query: 86 DPSDSAI---GGIRPLHDAAEKGCVEMVRLL---------PLHDAAEKGCVEMVRLLLSY 133
+ + I A +G ++ L E G + + +
Sbjct: 186 TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARH 245
Query: 134 GADPLLASYAVYFLS-----------------LPSRPLHDAAEKGCVEMVRLLLSYGADP 176
A + R L ++ ++ +R LLS
Sbjct: 246 VNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIK 305
Query: 177 LLAS-----YAGHTPLSITSDETTRKLLQYHLADVRGHE 210
LA + L LA G++
Sbjct: 306 ALAPTATIPGDANELL--------------RLALRLGNQ 330
Score = 82.2 bits (202), Expect = 4e-19
Identities = 26/218 (11%), Positives = 46/218 (21%), Gaps = 45/218 (20%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAP--KDNAGYTPLHEAASHGWLDIARLLLM 82
E AA G A+ + Y AA +G L + L
Sbjct: 88 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 147
Query: 83 YGADP--SDSAIGGIRPLHDAAEKGCVEMVRLL-------------------PLHDAAEK 121
+ AAE G + ++ L A +
Sbjct: 148 LAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 207
Query: 122 GCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADP----- 176
G ++ LL + E G + + +
Sbjct: 208 GHHNVINFLLDCPVM-------------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD 254
Query: 177 --LLASYAGHTPLSITSDETTRKLLQY--HLADVRGHE 210
L++ G L S+ + +
Sbjct: 255 AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLL 292
Score = 81.5 bits (200), Expect = 1e-18
Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 23/172 (13%)
Query: 12 DVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASH 71
++ + +I + A G+ + + + L+ +
Sbjct: 182 ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC--------PVMLAYAEIHEFEY 233
Query: 72 GWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVR----------LLPLHDAAEK 121
G + + + + + G ++V L L ++
Sbjct: 234 GEKYVNPFIARHVNRLKE----MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDE 289
Query: 122 GCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG 173
++ +R LLS LA A + L A G LLLS
Sbjct: 290 VLLDDIRFLLSIPGIKALAPTATI-PGDANELLRLALRLGNQGACALLLSIP 340
Score = 70.7 bits (172), Expect = 6e-15
Identities = 25/206 (12%), Positives = 55/206 (26%), Gaps = 20/206 (9%)
Query: 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLL 81
I + + L + + + + + + + + +LL
Sbjct: 7 IENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLC 66
Query: 82 MYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGC---VEMVRLLLSYGADPL 138
+Y A + +A H K V AA GC ++ + LLL+
Sbjct: 67 LYYAHYNRNAKQLWSDAHKKGIKSEV------ICFVAAITGCSSALDTLCLLLTSDEIVK 120
Query: 139 LASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLA--SYAGHTPLSITS---DE 193
+ Y + AAE G + ++ L ++A + + +
Sbjct: 121 VIQAENY------QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL 174
Query: 194 TTRKLLQYHLADVRGHEAPKWDFAGP 219
L ++
Sbjct: 175 HVLNRLCELAPTEATAMIQAENYYAF 200
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 79.2 bits (194), Expect = 3e-18
Identities = 33/139 (23%), Positives = 48/139 (34%), Gaps = 21/139 (15%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAG----YTPLHEAASHGWLD 75
+ G T L AA G+++ + L++ DN G L +
Sbjct: 141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA 200
Query: 76 IARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDA 118
I LLL +GAD + G PL A EK + +V+ L L A
Sbjct: 201 ITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLA 260
Query: 119 AEKGCVEMVRLLLSYGADP 137
E ++ LL GA
Sbjct: 261 VELKLKKIAELLCKRGAST 279
Score = 73.8 bits (180), Expect = 2e-16
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGAD 86
L +A + +D V LE ++ ++ G+TPLH A DI LLL +GAD
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64
Query: 87 PSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLL 130
P G P AA G V++++L +AA G V+ ++ L
Sbjct: 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 131 LSYGADPLLASYAVYFLSLPSR----PLHDAAEKGCVEMVRLLLS-YGADPLLASYAGH 184
GA+ L + L DAAEKG VE++++LL GAD G
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183
Score = 67.7 bits (164), Expect = 4e-14
Identities = 40/202 (19%), Positives = 64/202 (31%), Gaps = 35/202 (17%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFS---------HGPAPKDNAGYTPLHEAAS 70
+G T AA G + A+ + ++ + G T L +AA
Sbjct: 98 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157
Query: 71 HGWLDIARLLL-MYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRL 129
G +++ ++LL GAD + G L A V + L
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE-------------AITHL 204
Query: 130 LLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLS-YGADPLLASYAGHTPLS 188
LL +GAD + PL A EK + +V+ LL + G T L
Sbjct: 205 LLDHGADVNVRGERGKT------PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL 258
Query: 189 ITS----DETTRKLLQYHLADV 206
+ + L + A
Sbjct: 259 LAVELKLKKIAELLCK-RGAST 279
Score = 41.5 bits (96), Expect = 4e-05
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 153 PLHDAAEKGCVEMVRLLLSYGADP-LLASYAGHTPLSITSDETTRKLLQYHLADVRGHEA 211
L A + V++V+ LL GA+ G TPL + +++ L
Sbjct: 8 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67
Query: 212 PKWDF 216
K +
Sbjct: 68 RKKNG 72
Score = 38.8 bits (89), Expect = 3e-04
Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 23/144 (15%)
Query: 90 SAIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLS 132
+A+ L A + V++V+ L PLH+A + ++V LLL
Sbjct: 1 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60
Query: 133 YGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSD 192
+G + V + P AA G V++++L LS GAD + G T +
Sbjct: 61 HG------ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAV 114
Query: 193 ETTRKLLQYHLADVRGHEAPKWDF 216
K L++ +
Sbjct: 115 YGKVKALKFLYKRGANVNLRRKTK 138
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 72.7 bits (177), Expect = 4e-16
Identities = 51/216 (23%), Positives = 75/216 (34%), Gaps = 46/216 (21%)
Query: 31 LHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDS 90
+ A G ++ + + D T LH A S G +I LL G +D
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 91 AIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYG 134
G PLH AA G E+V+ L PLH AA K E+ +LL G
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126
Query: 135 ADPLLAS--------------YAVYFLSLPSR-------------PLHDAAEKGCVEMVR 167
A+P L PLH A ++ VE +
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186
Query: 168 LLLSYGADPLLASYAGHTPLSITS---DETTRKLLQ 200
LL+S GA + + TPL + +++++
Sbjct: 187 LLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVE 222
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 72.1 bits (175), Expect = 1e-15
Identities = 20/89 (22%), Positives = 34/89 (38%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84
+ G T LH AA++ + V Y + + +D G TP+ AA G +++ L+ G
Sbjct: 185 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG 244
Query: 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL 113
A A +V +
Sbjct: 245 ASVEAVDATDHTARQLAQANNHHNIVDIF 273
Score = 50.9 bits (120), Expect = 3e-08
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
Query: 114 PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSY 172
P+ AA++G +E+V L+ GA + A +V +
Sbjct: 224 PIMLAAQEGRIEVVMYLIQQGASVEAVDATDH------TARQLAQANNHHNIVDIFDRC 276
Score = 47.8 bits (112), Expect = 3e-07
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 9/90 (10%)
Query: 28 ETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY---- 83
E+P+ A+ + + T LH AS+ + + L+++
Sbjct: 1 ESPIKLHTEAAGSYAITEPITR-ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 84 ----GADPSDSAIGGIRPLHDAAEKGCVEM 109
GAD + PL A +
Sbjct: 60 CIAAGADVNAMDCDENTPLMLAVLARRRRL 89
Score = 46.7 bits (109), Expect = 7e-07
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 153 PLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSI 189
P+ AA++G +E+V L+ GA HT +
Sbjct: 224 PIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL 260
Score = 42.8 bits (99), Expect = 1e-05
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 7/103 (6%)
Query: 21 VINKHHGETPLHRAARLGYIDAVAYCLEKF-----SHG--PAPKDNAGYTPLHEAASHGW 73
+I+ H T LH A + + + G D TPL A
Sbjct: 27 IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR 86
Query: 74 LDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLH 116
+ L+ GADP+ LH AA M+ +
Sbjct: 87 RRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS 129
Score = 39.7 bits (91), Expect = 2e-04
Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 16/83 (19%)
Query: 113 LPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSY 172
+ LH A G + + + + + LH A E L+ +
Sbjct: 4 IKLHTEA-AGSYAITEPITRESVNIIDPRHN-------RTVLHWIASNSSAEKSEDLIVH 55
Query: 173 --------GADPLLASYAGHTPL 187
GAD +TPL
Sbjct: 56 EAKECIAAGADVNAMDCDENTPL 78
Score = 37.4 bits (85), Expect = 0.001
Identities = 13/81 (16%), Positives = 20/81 (24%), Gaps = 19/81 (23%)
Query: 63 TPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKG 122
LH A+ I + + D LH A
Sbjct: 4 IKLHTEAAGS-YAITEPITRESVNIIDPRHN------------------RTVLHWIASNS 44
Query: 123 CVEMVRLLLSYGADPLLASYA 143
E L+ + A +A+ A
Sbjct: 45 SAEKSEDLIVHEAKECIAAGA 65
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 68.5 bits (166), Expect = 2e-14
Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 31/192 (16%)
Query: 26 HGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWL-------DIAR 78
HG TPLH + ++ V + ++ S+ DN G + L +A +
Sbjct: 106 HGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 164
Query: 79 LLLMYGADPSDS---------AIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRL 129
L G+ AA+ ++ + +
Sbjct: 165 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 224
Query: 130 LLSYGADPLLASYAVYFLSLPSR--------------PLHDAAEKGCVEMVRLLLSYGAD 175
+ + L L L+ AA G + +V LL YGAD
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284
Query: 176 PLLASYAGHTPL 187
P +A+ +G P+
Sbjct: 285 PFIANKSGLRPV 296
Score = 58.1 bits (139), Expect = 1e-10
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 23 NKHHGETPLHRAARLGYIDAVAYCLEKF--SHGPAPKDNAGYTPLHEAASHGWLDIARLL 80
+ E+ + + K+ ++ +D+ G T L+ AA G + I L
Sbjct: 219 GTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL 278
Query: 81 LMYGADPSDSAIGGIRPLHDAA 102
L YGADP + G+RP+ A
Sbjct: 279 LDYGADPFIANKSGLRPVDFGA 300
Score = 50.8 bits (120), Expect = 3e-08
Identities = 19/157 (12%), Positives = 45/157 (28%), Gaps = 7/157 (4%)
Query: 55 APKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLP 114
P D G TPLH S L++ + L+ +G++ G L A +
Sbjct: 101 IPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFE 160
Query: 115 LHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGA 174
C+ + + ++ + + AA+ ++ ++
Sbjct: 161 ALLDYLYPCLILEDSMNRTILHHIIITSGMT-------GCSAAAKYYLDILMGWIVKKQN 213
Query: 175 DPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEA 211
P+ + + + + +L
Sbjct: 214 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN 250
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 66.7 bits (161), Expect = 7e-14
Identities = 32/162 (19%), Positives = 47/162 (29%), Gaps = 11/162 (6%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAP--KDNAGYTPLHEAASHGWLDIARLLLMYG 84
G+T LH A + + + L + +++ G T LH AA G L G
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68
Query: 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAV 144
A + GG LH A +L + L S P +
Sbjct: 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 145 YFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTP 186
D+ E + +Y GHTP
Sbjct: 129 ---------AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161
Score = 62.4 bits (150), Expect = 2e-12
Identities = 37/222 (16%), Positives = 51/222 (22%), Gaps = 36/222 (16%)
Query: 12 DVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASH 71
A + G+T LH AA LG V + + H A
Sbjct: 30 GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL-HLACRV 88
Query: 72 GWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLL 131
A +LL ++ + D+ E
Sbjct: 89 RAHTCACVLLQPRPSHPRD---ASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDE 145
Query: 132 SYGADP----------------------------LLASYAVYFLSLPSRPLHDAAEKGCV 163
+ A + PLH A E
Sbjct: 146 DWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAA 205
Query: 164 EMVRLLLSYGADPLLASYAGHTPLSITS----DETTRKLLQY 201
++ LLL GADP Y G TPL R L +
Sbjct: 206 SVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Score = 54.7 bits (130), Expect = 1e-09
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Query: 11 EDVGAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAAS 70
ED ++ + + G TPLH A + V + + P+ G TPLH A
Sbjct: 145 EDWRLQLEAE---NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVE 201
Query: 71 HGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAE 120
+ LLL GADP+ GG PL A + + RLL H A E
Sbjct: 202 AQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251
Score = 53.2 bits (126), Expect = 3e-09
Identities = 41/186 (22%), Positives = 58/186 (31%), Gaps = 36/186 (19%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAP-------------KDNAGYTPLH 66
++ + G T LH A R+ L+ P D +
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 67 EAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL------------- 113
++ + + + G PLH A EMVRLL
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT 190
Query: 114 ----PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLL 169
PLH A E ++ LLL GADP Y PL A + + RLL
Sbjct: 191 CGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGR------TPLGSALLRPNPILARLL 244
Query: 170 LSYGAD 175
++GA
Sbjct: 245 RAHGAP 250
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 64.9 bits (156), Expect = 3e-13
Identities = 57/225 (25%), Positives = 74/225 (32%), Gaps = 51/225 (22%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAP---KDNAGYTPLHEAASHGWLDIARLLLMY 83
G+TPLH A G + AV + F G +N TPLH A + RLL+
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRL--------------------LPLHDAAEKGC 123
GA P G H A E +R LH A C
Sbjct: 63 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122
Query: 124 VEMVRLLLSYGADPLLASYAVYFLSLP----------------------------SRPLH 155
E V+LLL GAD L S LH
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182
Query: 156 DAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQ 200
A+ +G + +VR L+ GAD L + TPL + +L+
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 53.7 bits (127), Expect = 2e-09
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
++ G +PL A ++ L + + +G + LH A+ G L + R
Sbjct: 137 DAVDIKSGRSPLIHAVE-NNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRT 195
Query: 80 LLMYGADPSDSAIGGIRPLHDAAEKGCVEMVR 111
L+ GAD S PL A + ++++R
Sbjct: 196 LVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 47.9 bits (112), Expect = 2e-07
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 23/148 (15%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
+ G T LH A + V LE+ + A +G +PL A + L + +L
Sbjct: 103 LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL 162
Query: 80 LLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLL 139
LL +GA+ + G LH A+ +G + +VR L+ GAD L
Sbjct: 163 LLQHGANVNAQMYSGSSALHSASGRGLLP-----------------LVRTLVRSGADSSL 205
Query: 140 ASYAVYFLSLPSRPLHDAAEKGCVEMVR 167
+ PL A + ++++R
Sbjct: 206 KNCHND------TPLMVARSRRVIDILR 227
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 57.0 bits (136), Expect = 3e-10
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 114 PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG 173
LH AA KG E+++LL+ D + Y + PLH AA G E R+L+
Sbjct: 202 ALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT------PLHAAAHWGKEEACRILVENL 255
Query: 174 ADPLLASYAGHTPLSITSDETTRKLLQ 200
D + G T + ++ L +
Sbjct: 256 CDMEAVNKVGQTAFDVADEDILGYLEE 282
Score = 55.1 bits (131), Expect = 9e-10
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 20/120 (16%)
Query: 32 HRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSA 91
+ + L +G T LH AA+ G+ ++ +LL+ D +
Sbjct: 170 RKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229
Query: 92 IGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCVEMVRLLLSYGA 135
G PLH AA G E R+L A E +++ L
Sbjct: 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEELQK 285
Score = 45.1 bits (105), Expect = 3e-06
Identities = 42/226 (18%), Positives = 68/226 (30%), Gaps = 47/226 (20%)
Query: 24 KHHGETPLHRAARLGYIDAVAYCLEKFSHGPAP--KDNAGYTPLHEAASHGWLDIARL-- 79
K A G + V LE G + G T LH+A +D+ +
Sbjct: 37 KFDDGAVFLAACSSGDTEEVLRLLE---RGADINYANVDGLTALHQACIDDNVDMVKFLV 93
Query: 80 -------------------------------LLMYGADPSDSAIGGIRPLHDAAEKGCVE 108
L+ GA G PL A E+ E
Sbjct: 94 ENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEE 153
Query: 109 MVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSR----PLHDAAEKGCVE 164
+++ + + + ++ LH AA KG E
Sbjct: 154 LLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE 213
Query: 165 MVRLLLSYGADPLLASYAGHTPLSITSD----ETTRKLLQYHLADV 206
+++LL+ D + Y G TPL + E R L++ +L D+
Sbjct: 214 VLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE-NLCDM 258
Score = 43.6 bits (101), Expect = 9e-06
Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 2/115 (1%)
Query: 115 LHDAAEKGCVEMVRLLLSYGA-DPLLASYAVYFLSLPSR-PLHDAAEKGCVEMVRLLLSY 172
+ DA +K ++ R + S +P + + A G E V LL
Sbjct: 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER 62
Query: 173 GADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEAPKWDFAGPASCFDKQM 227
GAD A+ G T L + ++++ + + P + P
Sbjct: 63 GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117
Score = 42.8 bits (99), Expect = 2e-05
Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 9/62 (14%)
Query: 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAP--KDNAGYTPLHEAASHGWLDIARL 79
I + G TPLH AA G +A +E + + G T A DI
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVE---NLCDMEAVNKVGQTAFDVADE----DILGY 279
Query: 80 LL 81
L
Sbjct: 280 LE 281
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 56.0 bits (133), Expect = 3e-10
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84
+ G+T LH AA + +AV +D+ TPL AA G + ++ LL
Sbjct: 121 NSGKTALHWAAAVNNTEAVNIL-LMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179
Query: 85 ADPSDSAIGGIRPLHDAAEKGCVEMVRLL 113
A+ + P A+E+ ++VRLL
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 48.2 bits (113), Expect = 1e-07
Identities = 44/194 (22%), Positives = 61/194 (31%), Gaps = 55/194 (28%)
Query: 25 HHGETPLHRAARLGYIDAVAY---------------------------------CLEKFS 51
GET LH AAR DA L +
Sbjct: 21 KTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRA 80
Query: 52 HGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVR 111
+ + G TPL AA + L+ AD + + G LH AA E V
Sbjct: 81 TNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVN 140
Query: 112 LL----------------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLH 155
+L PL AA +G E + LL A+ + + P
Sbjct: 141 ILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDR------LPRD 194
Query: 156 DAAEKGCVEMVRLL 169
A+E+ ++VRLL
Sbjct: 195 VASERLHHDIVRLL 208
Score = 37.1 bits (84), Expect = 8e-04
Identities = 36/191 (18%), Positives = 52/191 (27%), Gaps = 44/191 (23%)
Query: 43 VAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAA 102
++ L + + A D G T LH AA D A+ LL GAD + G PLH A
Sbjct: 5 ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAV 64
Query: 103 EKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSR---------- 152
+ + ++L + A A L V L
Sbjct: 65 AADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGK 124
Query: 153 -PLHDAAEKGCVEM---------------------------------VRLLLSYGADPLL 178
LH AA E + LL A+ +
Sbjct: 125 TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI 184
Query: 179 ASYAGHTPLSI 189
+ P +
Sbjct: 185 TDHMDRLPRDV 195
Score = 34.4 bits (77), Expect = 0.007
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 76 IARLLLMYGADPSDSA-IGGIRPLHDAAEKGCVEMVRLLPLH 116
+ LL GA+ + + G LH AA + + L
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDA 45
Score = 33.6 bits (75), Expect = 0.013
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 125 EMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLL 169
+++ LL+ GA+ LH AA + + L
Sbjct: 3 QVISDLLAQGAELNATMD-----KTGETSLHLAARFARADAAKRL 42
Score = 28.2 bits (61), Expect = 0.72
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 164 EMVRLLLSYGADP-LLASYAGHTPL 187
+++ LL+ GA+ G T L
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSL 27
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 55.7 bits (132), Expect = 5e-10
Identities = 53/207 (25%), Positives = 76/207 (36%), Gaps = 33/207 (15%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAP---KDNAGYTPLHEAASHGWLDIARLLLMY 83
G++ LH A + + A ++N TPLH A +IA LL
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 84 GADPSDSAIGGIRPLHDAAEKGCVEMV----------------------RLLPLHDAAEK 121
G DP G PLH A E+GC+ V LH A+
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121
Query: 122 GCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASY 181
G + +V LL+S GAD LH A + ++V LLL GAD +Y
Sbjct: 122 GYLGIVELLVSLGAD-----VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY 176
Query: 182 AGHTPLSITS---DETTRKLLQYHLAD 205
G++P +T ++ L +
Sbjct: 177 QGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 52.6 bits (124), Expect = 5e-09
Identities = 24/94 (25%), Positives = 36/94 (38%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
++G T LH A+ GY+ V + + A + G T LH A D+ L
Sbjct: 104 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSL 163
Query: 80 LLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL 113
LL GAD + G P + + + L
Sbjct: 164 LLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL 197
Score = 51.4 bits (121), Expect = 1e-08
Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
+G T LH A L D V+ L+ + GY+P I +
Sbjct: 138 NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR-VTYQGYSPYQLTWGRPSTRIQQQ 196
Query: 80 LLMYGADP 87
L +
Sbjct: 197 LGQLTLEN 204
Score = 43.0 bits (99), Expect = 9e-06
Identities = 31/175 (17%), Positives = 48/175 (27%), Gaps = 28/175 (16%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAAS-----HGWLDIARL 79
+ +TPLH A + L G L +
Sbjct: 37 NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCT 96
Query: 80 LLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL-----------------PLHDAAEKG 122
+ + G LH A+ G + +V LL LH A +
Sbjct: 97 TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 156
Query: 123 CVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYGADPL 177
++V LLL GAD +Y Y P + + + L + L
Sbjct: 157 NPDLVSLLLKCGADVNRVTYQGY------SPYQLTWGRPSTRIQQQLGQLTLENL 205
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 54.8 bits (130), Expect = 9e-10
Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 21/118 (17%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
I + PLHRAA +G + + +D G+TPL A + G D A L
Sbjct: 131 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL 190
Query: 80 LLM-YGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGAD 136
L+ YGA+ G + A + ++ + L+ D
Sbjct: 191 LVEKYGAEYDLVDNKGAKAEDVALNE--------------------QVKKFFLNNVVD 228
Score = 50.2 bits (118), Expect = 4e-08
Identities = 16/56 (28%), Positives = 19/56 (33%)
Query: 29 TPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYG 84
PLH+A V L KD G PLH + S +I LL
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 45.2 bits (105), Expect = 2e-06
Identities = 37/202 (18%), Positives = 65/202 (32%), Gaps = 26/202 (12%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLEK----FSHGPAPKDNAGYTPLHEAASHGWLDIARLL 80
G PLH + + ++ L K + + + + +
Sbjct: 32 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 91
Query: 81 LMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCV 124
D + G+ LH A K E+ + L PLH AA G +
Sbjct: 92 RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 151
Query: 125 EMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLS-YGADPLLASYAG 183
+++ LL G + + PL A +G + LL+ YGA+ L G
Sbjct: 152 KLIELLCGLGKSAVNWQDKQGW-----TPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 206
Query: 184 HTPLSITSDETTRKLLQYHLAD 205
+ +E +K ++ D
Sbjct: 207 AKAEDVALNEQVKKFFLNNVVD 228
Score = 40.6 bits (93), Expect = 6e-05
Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 63 TPLHEAASHGWLDIARLLL-MYGADPSDSAIGGIRPLHDAAEKGCVEM 109
PLH+A + LL + G PLH + E+
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEI 49
Score = 37.9 bits (86), Expect = 5e-04
Identities = 13/65 (20%), Positives = 17/65 (26%), Gaps = 15/65 (23%)
Query: 153 PLHDAAEKGCVEMVRLLL-SYGADPLLASYAGHTPLSITSDETTRKLLQYHLADVRGHEA 211
PLH A + V+ LL S + L G PL H +
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPL--------------HWSVSFQAHE 48
Query: 212 PKWDF 216
Sbjct: 49 ITSFL 53
Score = 35.6 bits (80), Expect = 0.003
Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 114 PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG 173
PLH A + V+ LL LL + PLH + E+ LLS
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRI-----PLHWSVSFQAHEITSFLLSKM 57
Score = 31.7 bits (70), Expect = 0.049
Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 17/55 (30%)
Query: 97 PLHDAAEKGCVEMVRLL-----------------PLHDAAEKGCVEMVRLLLSYG 134
PLH A + V+ L PLH + E+ LLS
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 49.2 bits (116), Expect = 3e-08
Identities = 22/134 (16%), Positives = 29/134 (21%), Gaps = 24/134 (17%)
Query: 29 TPLHRAARLGYIDAVAYCLEK-----FSHGPAPKDNAGYTPLHEAA---SHGWLDIARLL 80
L A + I + A T LH A L I L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 81 LMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL----------------PLHDAAEKGCV 124
+ + G LH E ++LL PL A
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127
Query: 125 EMVRLLLSYGADPL 138
LL +
Sbjct: 128 HCEELLTQALSGRF 141
Score = 45.0 bits (105), Expect = 1e-06
Identities = 19/150 (12%), Positives = 31/150 (20%), Gaps = 41/150 (27%)
Query: 58 DNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHD 117
A L EA + G D ++ PL + E LH
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKI-----PLANGHEPDET------ALHL 51
Query: 118 AA---EKGCVEMVRLLLSYGADPLLASYAVYFLSLPSR---------------------- 152
A ++ + +V L+ + +
Sbjct: 52 AVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN 111
Query: 153 -----PLHDAAEKGCVEMVRLLLSYGADPL 177
PL A LL +
Sbjct: 112 ESGETPLDIAKRLKHEHCEELLTQALSGRF 141
Score = 39.6 bits (91), Expect = 9e-05
Identities = 22/90 (24%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Query: 26 HGETPLHRAARLGYIDA--VAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMY 83
ET LH A R + + L + S + G T LH + +LLL
Sbjct: 44 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 103
Query: 84 GADPSDSAIGGIRPLHDAAEKGCVEMVRLL 113
A + G PL A LL
Sbjct: 104 KASIEIANESGETPLDIAKRLKHEHCEELL 133
Score = 37.3 bits (85), Expect = 5e-04
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 58 DNAGYTPLHEAASHGWLDIARLLLMYGADPSDS 90
+ +G TPL A LL + +S
Sbjct: 111 NESGETPLDIAKRLKHEHCEELLTQALSGRFNS 143
Score = 31.1 bits (69), Expect = 0.064
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGY 62
I GETPL A RL + + S + Y
Sbjct: 107 IEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEY 149
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 43.9 bits (102), Expect = 2e-06
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 19/128 (14%)
Query: 63 TPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVR----------- 111
L +++ G D+ + ++ DPS GI LH+A G E+V+
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 112 -----LLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMV 166
PLH AA V++ + L+ GA +Y+ + + E+G +
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA---DKCEEMEEGYTQCS 119
Query: 167 RLLLSYGA 174
+ L
Sbjct: 120 QFLYGVQE 127
Score = 33.1 bits (74), Expect = 0.011
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 150 PSRPLHDAAEKGCVEMVRLLLSYGADP 176
P L D++ +G ++V+ ++ DP
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDP 27
Score = 32.3 bits (72), Expect = 0.016
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 112 LLPLHDAAEKGCVEMVRLLLSYGADP 137
L L D++ +G ++V+ ++ DP
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDP 27
Score = 29.3 bits (64), Expect = 0.19
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTP--LHEAASHGWLDIA 77
G TPLH AA + + +E + A + T E G+ +
Sbjct: 60 VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 119
Query: 78 RLLLMYGA 85
+ L
Sbjct: 120 QFLYGVQE 127
Score = 26.6 bits (57), Expect = 1.8
Identities = 5/36 (13%), Positives = 8/36 (22%)
Query: 14 GAEVRSWVINKHHGETPLHRAARLGYIDAVAYCLEK 49
GA V + + GY +
Sbjct: 90 GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 40.6 bits (93), Expect = 3e-05
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
I + G PLH AA+ G++ V + ++ + +++ G T A +G ++ L
Sbjct: 92 VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 151
Query: 80 LLMYG 84
+ G
Sbjct: 152 MQANG 156
Score = 37.9 bits (86), Expect = 3e-04
Identities = 26/155 (16%), Positives = 38/155 (24%), Gaps = 11/155 (7%)
Query: 29 TPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPS 88
L AA G ++ + L+ + ++ G T L RLLL
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 61
Query: 89 DSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLS 148
G A + LL E L + L
Sbjct: 62 KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121
Query: 149 LPSR----------PLHDAAEKGCVEMVRLLLSYG 173
S A G E+V L+ + G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 37.2 bits (84), Expect = 6e-04
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 153 PLHDAAEKGCVEMVRLLLSYGADPLLASYAGH 184
L AA +G +E + LL + + G
Sbjct: 4 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 40.6 bits (93), Expect = 4e-05
Identities = 32/150 (21%), Positives = 42/150 (28%), Gaps = 12/150 (8%)
Query: 63 TPLHEAASHGWLDIARLLLMYGADPSDSAIG---------GIRPLHDAAEKGCVEMVRLL 113
L EAA G D R+L+ GA + +G
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 114 PLHDAAEKGCVEMVRLLLSYGADPLLASYAVYFLSLPSRPLHDAAEKGCVEMVRLLLSYG 173
D + L LH A E E+V LL+ YG
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 174 ADPLLASYAGHTPLSITSD---ETTRKLLQ 200
AD S T I+ D E ++LQ
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153
Score = 39.5 bits (90), Expect = 8e-05
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
T LH A + + V ++ + + T + +G D+A +
Sbjct: 93 VNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEI 151
Query: 80 L 80
L
Sbjct: 152 L 152
Score = 39.5 bits (90), Expect = 8e-05
Identities = 31/149 (20%), Positives = 45/149 (30%), Gaps = 47/149 (31%)
Query: 29 TPLHRAARLGYIDAVAYCLEK-------------------------------FSHGPAPK 57
L AAR G D V + +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 58 DNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLL---- 113
TPLH AAS G +I +LL +GAD + + + LH A E E+V LL
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 114 ------------PLHDAAEKGCVEMVRLL 130
+ + G ++ +L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 39.6 bits (90), Expect = 5e-05
Identities = 24/121 (19%), Positives = 37/121 (30%), Gaps = 10/121 (8%)
Query: 61 GYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAE 120
L AA+ G ++ R LL GA+P+ G RP+ LL
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 121 KGCVEMVRLLLSYGADPLLASYAVYFLSLPSR----------PLHDAAEKGCVEMVRLLL 170
+ + A V +R P+ A E G ++ R L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 171 S 171
+
Sbjct: 123 A 123
Score = 34.5 bits (77), Expect = 0.003
Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 15/121 (12%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGAD 86
L AA G ++ V LE ++ AP + LL +
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 87 PSDSAIGGIRPLHDAAEKGCVEMVRLL---------------PLHDAAEKGCVEMVRLLL 131
+D A A E +V L P+ A E G ++ R L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 132 S 132
+
Sbjct: 123 A 123
Score = 31.5 bits (69), Expect = 0.037
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 153 PLHDAAEKGCVEMVRLLLSYGA 174
L AA +G VE VR LL GA
Sbjct: 6 WLATAAARGRVEEVRALLEAGA 27
Score = 26.8 bits (57), Expect = 1.4
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLE 48
+ G P+ A LG+ D Y
Sbjct: 95 LDVRDAWGRLPVDLAEELGHRDVARYLRA 123
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 38.3 bits (87), Expect = 2e-04
Identities = 22/153 (14%), Positives = 36/153 (23%), Gaps = 8/153 (5%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGAD 86
L AA G + V L + P + G T L LL +
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 87 PSDSAIGGIRPLHDAAEKGCVEMVRLLPLHDAAEKGCVEMVRLLLSYGADPLLASYAVYF 146
G A + L+ + + A +
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 147 LSLP--------SRPLHDAAEKGCVEMVRLLLS 171
PL A ++G ++V +L
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 32.9 bits (73), Expect = 0.018
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 45 YCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGADPSDSAIGGIRPLHDAAEK 104
L + D G P+H A G + L +D G+ PL A ++
Sbjct: 85 KVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQR 143
Query: 105 GCVEMVRLLPLH 116
G ++V +L H
Sbjct: 144 GAQDLVDILQGH 155
Score = 30.2 bits (66), Expect = 0.13
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 153 PLHDAAEKGCVEMVRLLL-SYGADPLLASYAGHTP 186
L AA +G V+ VR LL P + G T
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA 39
Score = 29.8 bits (65), Expect = 0.16
Identities = 8/24 (33%), Positives = 9/24 (37%)
Query: 25 HHGETPLHRAARLGYIDAVAYCLE 48
G TPL A + G D V
Sbjct: 131 ARGLTPLELALQRGAQDLVDILQG 154
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 32.2 bits (71), Expect = 0.020
Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 10/115 (8%)
Query: 96 RPLHDAAEKGCVEMVRLL----------PLHDAAEKGCVEMVRLLLSYGADPLLASYAVY 145
+ A + G ++ V+ L L +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 146 FLSLPSRPLHDAAEKGCVEMVRLLLSYGADPLLASYAGHTPLSITSDETTRKLLQ 200
PL A +G V V+LLLS GAD + G T L T ++ + LLQ
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 29.1 bits (63), Expect = 0.19
Identities = 5/26 (19%), Positives = 9/26 (34%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSH 52
+ A + G +D V + K
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGED 27
Score = 24.9 bits (52), Expect = 6.6
Identities = 9/61 (14%), Positives = 13/61 (21%), Gaps = 3/61 (4%)
Query: 20 WVINKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARL 79
+ +A + L K G T L + I L
Sbjct: 60 DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQ---AIKAL 116
Query: 80 L 80
L
Sbjct: 117 L 117
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
synthase) {Haemophilus influenzae [TaxId: 727]}
Length = 310
Score = 29.1 bits (64), Expect = 0.45
Identities = 13/59 (22%), Positives = 23/59 (38%)
Query: 27 GETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLDIARLLLMYGA 85
G TPL R G+ V +E + + K G + +A G L + ++ +
Sbjct: 11 GNTPLVRLKHFGHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEIVDATS 69
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermotoga maritima [TaxId: 2336]}
Length = 293
Score = 26.6 bits (58), Expect = 2.9
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 22 INKHHGETPLHRAARLGYIDAVAYCLEKFSHGPAPKDNAGYTPLHEAASHGWL 74
+ + G TP+ R + + LEK + G + KD + +A G L
Sbjct: 4 MERLIGSTPIVRLDSID--SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLL 54
>d2czca1 d.81.1.1 (A:140-301) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 162
Score = 25.6 bits (56), Expect = 3.9
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Query: 109 MVRLL-PLHDAAEKGCVEMVRLLLSYGADP 137
+VR L + + A+ M+R ADP
Sbjct: 7 LVRTLSAIREYADYVYAVMIR----RAADP 32
>d1y5ia2 c.81.1.1 (A:1-1074) Respiratory nitrate reductase 1 alpha
chain {Escherichia coli [TaxId: 562]}
Length = 1074
Score = 25.6 bits (55), Expect = 7.4
Identities = 5/49 (10%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Query: 60 AGYTPLHEAASHGWLDI--ARLLLMYGADPSDSAIGGIRPLHDAAEKGC 106
+ T + D + ++ +G++ + + KG
Sbjct: 227 SPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT 275
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermus thermophilus [TaxId: 274]}
Length = 302
Score = 24.9 bits (53), Expect = 9.2
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 22 INKHHGETPLHRAARLGYIDA--VAYCLEKFSHGPAPKDNAGYTPLHEAASHGWLD 75
+ G+TP+ R A++ D V LE + G + KD + + +A G L
Sbjct: 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILR 58
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 25.0 bits (53), Expect = 9.6
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 9 TVEDVGAEVRSWVINKHHGETPLHRAARL-GYIDAVAYC-LEKFSHGPAPKDNAGYTPLH 66
+++D+ A R I + TPL + L G + E + K +
Sbjct: 2 SLQDLYAAFRR--IAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKAL 59
Query: 67 EAASHGW 73
+
Sbjct: 60 ALENPKG 66
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.421
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 870,029
Number of extensions: 39101
Number of successful extensions: 419
Number of sequences better than 10.0: 1
Number of HSP's gapped: 259
Number of HSP's successfully gapped: 139
Length of query: 235
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 152
Effective length of database: 1,268,006
Effective search space: 192736912
Effective search space used: 192736912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)