BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy571
(162 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FAI|A Chain A, Crystal Structure Of Mitochondrial Isoform Of Glutaminyl
Cyclase From Drosophila Melanogaster
pdb|4FAI|B Chain B, Crystal Structure Of Mitochondrial Isoform Of Glutaminyl
Cyclase From Drosophila Melanogaster
Length = 330
Score = 116 bits (290), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 18/165 (10%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQN-LGLDLIFFDGEEAFNEWSAEDSIWGARH 63
F+GATDSAVPCAMLL +A++++++L L ++ L L L+FFDGEEAF EW +DSI+GARH
Sbjct: 124 FLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARH 183
Query: 64 LAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVGIESRL 123
LA KW H GK G +P FYS++ T WY ++ +E+RL
Sbjct: 184 LAKKW-----HHEGKL----DRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRL 234
Query: 124 TAQGLLNMVNSN---RSKKLTYFREM---STFPVAEDDHLPFYYR 162
LL S+ + YF+ S+F EDDH+PF R
Sbjct: 235 AKLQLLERYASSGVAQRDPTRYFQSQAMRSSF--IEDDHIPFLRR 277
>pdb|3SI2|A Chain A, Structure Of Glycosylated Murine Glutaminyl Cyclase In
Presence Of The Inhibitor Pq50 (Pdbd150)
Length = 327
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF+ WS +DS+
Sbjct: 120 FVGATDSAVPCAMMLELARALDKKLHSLKDVSGSKPDLSLQLIFFDGEEAFHHWSPQDSL 179
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLA K S + + G +NP F +++P T +W+ +L
Sbjct: 180 YGSRHLAQKMASSPHPPGSRGTNQLDGMDLLVLLDLIGAANPTFPNFFPKTTRWFNRLQA 239
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 159
IE L GLL + S + YF+ + +DDH+PF
Sbjct: 240 IEKELYELGLLK----DHSLERKYFQNFGYGNIIQDDHIPF 276
>pdb|2ZEL|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248a At 1.97 Angstrom Resolution
pdb|2ZEL|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248a At 1.97 Angstrom Resolution
Length = 329
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLALIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|3SI1|A Chain A, Structure Of Glycosylated Murine Glutaminyl Cyclase
Length = 327
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF+ WS +DS+
Sbjct: 120 FVGATDSAVPCAMMLELARALDKKLHSLKDVSGSKPDLSLRLIFFDGEEAFHHWSPQDSL 179
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLA K S + + G +NP F +++P T +W+ +L
Sbjct: 180 YGSRHLAQKMASSPHPPGSRGTNQLDGMDLLVLLDLIGAANPTFPNFFPKTTRWFNRLQA 239
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 159
IE L GLL + S + YF+ + +DDH+PF
Sbjct: 240 IEKELYELGLLK----DHSLERKYFQNFGYGNIIQDDHIPF 276
>pdb|3SI0|A Chain A, Structure Of Glycosylated Human Glutaminyl Cyclase
Length = 330
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 123 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 182
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 183 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 242
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 243 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 282
>pdb|2ZEM|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248q At 2.18 Angstrom Resolution
pdb|2ZEM|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248q At 2.18 Angstrom Resolution
Length = 329
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLQLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2AFM|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase At Ph 6.5
pdb|2AFM|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase At Ph 6.5
pdb|2AFO|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase At Ph 8.0
pdb|2AFO|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase At Ph 8.0
pdb|2AFW|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With N-Acetylhistamine
pdb|2AFW|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With N-Acetylhistamine
pdb|2AFX|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Benzylimidazole
pdb|2AFX|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Benzylimidazole
pdb|2AFZ|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Vinylimidazole
pdb|2AFZ|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Vinylimidazole
pdb|3PBB|A Chain A, Crystal Structure Of Human Secretory Glutaminyl Cyclase In
Complex With Pbd150
pdb|3PBB|B Chain B, Crystal Structure Of Human Secretory Glutaminyl Cyclase In
Complex With Pbd150
Length = 329
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2ZEP|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
H319l At 2.1 Angstrom Resolution
pdb|2ZEP|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
H319l At 2.1 Angstrom Resolution
Length = 329
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2AFS|A Chain A, Crystal Structure Of The Genetic Mutant R54w Of Human
Glutaminyl Cyclase
pdb|2AFS|B Chain B, Crystal Structure Of The Genetic Mutant R54w Of Human
Glutaminyl Cyclase
Length = 329
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|4FBE|A Chain A, Crystal Structure Of The C136aC164A VARIANT OF
MITOCHONDRIAL ISOFORM Of Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4FBE|B Chain B, Crystal Structure Of The C136aC164A VARIANT OF
MITOCHONDRIAL ISOFORM Of Glutaminyl Cyclase From
Drosophila Melanogaster
Length = 330
Score = 112 bits (280), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 93/165 (56%), Gaps = 18/165 (10%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQN-LGLDLIFFDGEEAFNEWSAEDSIWGARH 63
F+GATDSAVP AMLL +A++++++L L ++ L L L+FFDGEEAF EW +DSI+GARH
Sbjct: 124 FLGATDSAVPAAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARH 183
Query: 64 LAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVGIESRL 123
LA KW H GK G +P FYS++ T WY ++ +E+RL
Sbjct: 184 LAKKW-----HHEGKL----DRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRL 234
Query: 124 TAQGLLNMVNSN---RSKKLTYFREM---STFPVAEDDHLPFYYR 162
LL S+ + YF+ S+F EDDH+PF R
Sbjct: 235 AKLQLLERYASSGVAQRDPTRYFQSQAMRSSF--IEDDHIPFLRR 277
>pdb|2ZED|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160a At 1.7 Angstrom Resolution
pdb|2ZED|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160a At 1.7 Angstrom Resolution
Length = 329
Score = 112 bits (280), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATD+AVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDAAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2ZEF|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201d At 1.67 Angstrom Resolution
pdb|2ZEF|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201d At 1.67 Angstrom Resolution
Length = 329
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDG+EAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGDEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2AFU|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With Glutamine T-Butyl Ester
pdb|2AFU|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With Glutamine T-Butyl Ester
pdb|2ZEH|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201q At 1.8 Angstrom Resolution
pdb|2ZEH|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201q At 1.8 Angstrom Resolution
Length = 329
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDG+EAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGQEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2ZEE|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160g At 1.99 Angstrom Resolution
pdb|2ZEE|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160g At 1.99 Angstrom Resolution
Length = 329
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATD AVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDGAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2ZEO|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305e At 1.66 Angstrom Resolution
pdb|2ZEO|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305e At 1.66 Angstrom Resolution
Length = 329
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V ++DH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQEDHIPFLRR 281
>pdb|2ZEG|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201l At 2.08 Angstrom Resolution
pdb|2ZEG|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201l At 2.08 Angstrom Resolution
Length = 329
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDG EAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGLEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|2ZEN|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305a At 1.78 Angstrom Resolution
pdb|2ZEN|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305a At 1.78 Angstrom Resolution
Length = 329
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF WS +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V + DH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQADHIPFLRR 281
>pdb|3PBE|A Chain A, Crystal Structure Of The Mutant W207f Of Human Secretory
Glutaminyl Cyclase
pdb|3PBE|B Chain B, Crystal Structure Of The Mutant W207f Of Human Secretory
Glutaminyl Cyclase
Length = 329
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSI 58
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF +S +DS+
Sbjct: 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHFSPQDSL 181
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLAAK + + ++ G NP F +++P + +W+++L
Sbjct: 182 YGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE L GLL + S + YF+ S V +DDH+PF R
Sbjct: 242 IEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPFLRR 281
>pdb|3PB4|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase At Ph 6.0
pdb|3PB6|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase At Ph 6.5
pdb|3PB7|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase In Complex With Pbd150
pdb|3PB8|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase In Complex With
N-Acetylhistamine
pdb|3PB9|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase In Complex With
1-Benzylimidazole
Length = 330
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 10/164 (6%)
Query: 2 ASPFIGATDSAVPCAMLLYIARLMRQELSQLNQN---LGLDLIFFDGEEAFNEWSAEDSI 58
++PF+GATDSAVPCA+LL +A+ + ELS+ + + L L+F DGEEA EW +DS+
Sbjct: 126 STPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSL 185
Query: 59 WGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVG 118
+G+RHLA E + H T+ G NP FYS++P T +W+ +L
Sbjct: 186 YGSRHLAQLMES--IPHSPGP-TRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFHRLRS 242
Query: 119 IESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYYR 162
IE RL LN++ S+ +++ YF+ F EDDH+PF R
Sbjct: 243 IEKRLHR---LNLLQSH-PQEVMYFQPGEPFGSVEDDHIPFLRR 282
>pdb|4F9U|A Chain A, Structure Of Glycosylated Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4F9U|B Chain B, Structure Of Glycosylated Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4FWU|A Chain A, Crystal Structure Of Glutaminyl Cyclase From Drosophila
Melanogaster In Space Group I4
Length = 312
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 11/159 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQN---LGLDLIFFDGEEAFNEWSAEDSIWGA 61
F+GATDSAVPCA+LL A+ + L + +N +GL LIFFDGEEAF EW+ DS++G+
Sbjct: 98 FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGS 157
Query: 62 RHLAAKWERSHLQHRGKTLTKXXXXXXX-XXXXXXGTSNPRFYSYYPPTHKWYKQLVGIE 120
+HLAAK + + + G NP+F S+Y T + LV IE
Sbjct: 158 KHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIE 217
Query: 121 SRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 159
L G L N+ F + + +DDH PF
Sbjct: 218 KSLRTAGQLEGNNN-------MFLSRVSGGLVDDDHRPF 249
>pdb|4F9V|A Chain A, Structure Of C113aC136A MUTANT VARIANT OF GLYCOSYLATED
GLUTAMINYL Cyclase From Drosophila Melanogaster
pdb|4F9V|B Chain B, Structure Of C113aC136A MUTANT VARIANT OF GLYCOSYLATED
GLUTAMINYL Cyclase From Drosophila Melanogaster
Length = 312
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQN---LGLDLIFFDGEEAFNEWSAEDSIWGA 61
F+GATDSAVP A+LL A+ + L + +N +GL LIFFDGEEAF EW+ DS++G+
Sbjct: 98 FVGATDSAVPAAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGS 157
Query: 62 RHLAAKWERSHLQHRGKTLTKXXXXXXX-XXXXXXGTSNPRFYSYYPPTHKWYKQLVGIE 120
+HLAAK + + + G NP+F S+Y T + LV IE
Sbjct: 158 KHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIE 217
Query: 121 SRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 159
L G L N+ F + + +DDH PF
Sbjct: 218 KSLRTAGQLEGNNN-------MFLSRVSGGLVDDDHRPF 249
>pdb|4FUU|A Chain A, Crystal Structure Of A Leucine Aminopeptidase Precursor
(Bt_2548) From Bacteroides Thetaiotaomicron Vpi-5482 At
1.30 A Resolution
Length = 309
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47
+P +GA D A LL IARL+ Q+ + LG+D+IF D E+
Sbjct: 120 TPILGANDGASGVGALLEIARLVNQQQPE----LGIDIIFLDAED 160
>pdb|3GUX|A Chain A, Crystal Structure Of A Putative Zn-Dependent Exopeptidase
(Bvu_1317) From Bacteroides Vulgatus Atcc 8482 At 1.80 A
Resolution
pdb|3GUX|B Chain B, Crystal Structure Of A Putative Zn-Dependent Exopeptidase
(Bvu_1317) From Bacteroides Vulgatus Atcc 8482 At 1.80 A
Resolution
Length = 314
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47
+P +G D A +LL IAR +++E L G+D++FFD E+
Sbjct: 122 TPILGVNDGASGVGVLLEIARQIQKEQPAL----GIDIVFFDSED 162
>pdb|3TC8|A Chain A, Crystal Structure Of A Hypothetical Zn-Dependent
Exopeptidase (Bdi_3547) From Parabacteroides Distasonis
Atcc 8503 At 1.06 A Resolution
pdb|3TC8|B Chain B, Crystal Structure Of A Hypothetical Zn-Dependent
Exopeptidase (Bdi_3547) From Parabacteroides Distasonis
Atcc 8503 At 1.06 A Resolution
Length = 309
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47
+P GA D LL IAR ++ Q +G+D+IFFD E+
Sbjct: 120 TPLDGADDGGSGVGALLEIAR----QIGQKAPGIGIDIIFFDAED 160
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|B Chain B, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|C Chain C, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|D Chain D, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|E Chain E, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|F Chain F, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0W|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana
Length = 539
Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 15 CAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI 58
C ++ RL Q QLN G++ +FFD ++ ++W E +
Sbjct: 457 CPIVCVTTRL--QTCRQLNITQGVESVFFDADKLGHDWGKEHRV 498
>pdb|3RFA|A Chain A, X-Ray Structure Of Rlmn From Escherichia Coli In Complex
With S- Adenosylmethionine
pdb|3RFA|B Chain B, X-Ray Structure Of Rlmn From Escherichia Coli In Complex
With S- Adenosylmethionine
Length = 404
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 114 KQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYY 161
+QLV E+ T G +N+++ NR + +F+++ P D + + Y
Sbjct: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY 50
>pdb|3RF9|A Chain A, X-Ray Structure Of Rlmn From Escherichia Coli
pdb|3RF9|B Chain B, X-Ray Structure Of Rlmn From Escherichia Coli
Length = 404
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 114 KQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYY 161
+QLV E+ T G +N+++ NR + +F+++ P D + + Y
Sbjct: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY 50
>pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase
Thrrs-1 From Aeropyrum Pernix (Selenomethionine
Derivative)
Length = 471
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 25 MRQELSQLNQNLGLDLIFFDGEEAF 49
+R+ S++N+ G+D++ +GE AF
Sbjct: 232 LREAASRINEKYGIDIVELEGEAAF 256
>pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase
Thrrs-1 From Aeropyrum Pernix
Length = 471
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 25 MRQELSQLNQNLGLDLIFFDGEEAF 49
+R+ S++N+ G+D++ +GE AF
Sbjct: 232 LREAASRINEKYGIDIVELEGEAAF 256
>pdb|3V2A|R Chain R, Vegfr-2VEGF-A Complex Structure
Length = 772
Score = 26.6 bits (57), Expect = 6.3, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 101 RFYSYYPPTHKWYKQLVGIESRLTAQG 127
++ Y PP KWYK + +ES T +
Sbjct: 353 KYLGYPPPEIKWYKNGIPLESNHTIKA 379
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,557,307
Number of Sequences: 62578
Number of extensions: 151330
Number of successful extensions: 422
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 331
Number of HSP's gapped (non-prelim): 31
length of query: 162
length of database: 14,973,337
effective HSP length: 91
effective length of query: 71
effective length of database: 9,278,739
effective search space: 658790469
effective search space used: 658790469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)