Query psy571
Match_columns 162
No_of_seqs 147 out of 982
Neff 6.3
Searched_HMMs 29240
Date Sat Aug 17 00:39:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pb6_X Glutaminyl-peptide cycl 100.0 2.1E-35 7.1E-40 251.3 15.6 153 3-162 127-282 (330)
2 4fai_A CG5976, isoform B; alph 100.0 5.2E-34 1.8E-38 241.5 13.7 151 3-162 122-277 (330)
3 4f9u_A CG32412; alpha/beta hyd 100.0 5.8E-33 2E-37 232.0 14.5 153 3-162 96-252 (312)
4 2afw_A Glutaminyl-peptide cycl 100.0 7.4E-29 2.5E-33 209.3 14.9 156 3-162 120-281 (329)
5 3gux_A Putative Zn-dependent e 99.9 8.4E-26 2.9E-30 190.7 7.6 132 3-161 122-259 (314)
6 4fuu_A Leucine aminopeptidase; 99.9 7.5E-26 2.6E-30 189.3 6.8 132 3-161 120-257 (309)
7 3tc8_A Leucine aminopeptidase; 99.9 5.2E-25 1.8E-29 185.2 7.6 132 3-161 120-256 (309)
8 3iib_A Peptidase M28; YP_92679 99.7 1.4E-16 4.9E-21 139.2 9.1 76 6-102 265-340 (444)
9 1tkj_A Aminopeptidase, SGAP; d 99.6 3.5E-15 1.2E-19 122.9 9.2 77 6-102 93-169 (284)
10 1rtq_A Bacterial leucyl aminop 99.6 7.7E-15 2.6E-19 121.5 10.9 74 5-99 112-185 (299)
11 3kas_A Transferrin receptor pr 99.6 4.1E-15 1.4E-19 135.8 9.9 80 5-102 293-374 (640)
12 3k9t_A Putative peptidase; str 99.6 6.1E-15 2.1E-19 128.8 9.2 67 7-100 193-259 (435)
13 3fed_A Glutamate carboxypeptid 99.6 9.4E-15 3.2E-19 134.8 9.5 82 4-103 338-420 (707)
14 2ek8_A Aminopeptidase; metallo 99.5 1.3E-14 4.5E-19 125.5 5.1 73 6-100 236-308 (421)
15 3t68_A Succinyl-diaminopimelat 98.2 5.3E-06 1.8E-10 67.0 8.2 71 6-97 99-170 (268)
16 4h2k_A Succinyl-diaminopimelat 98.1 6.9E-06 2.4E-10 66.4 8.4 70 6-96 99-169 (269)
17 1q7l_A Aminoacylase-1; catalys 98.0 8.5E-06 2.9E-10 63.1 5.1 52 6-67 109-161 (198)
18 1vhe_A Aminopeptidase/glucanas 97.9 1.3E-05 4.3E-10 67.9 5.1 62 8-97 182-243 (373)
19 2wyr_A Cobalt-activated peptid 97.8 6.7E-06 2.3E-10 68.1 1.9 63 8-98 171-233 (332)
20 2zog_A Cytosolic non-specific 97.7 6E-05 2E-09 65.0 7.0 69 6-94 132-200 (479)
21 3ct9_A Acetylornithine deacety 97.7 4.4E-05 1.5E-09 63.7 5.9 50 6-67 101-151 (356)
22 1y0y_A FRV operon protein FRVX 97.7 3.5E-05 1.2E-09 64.5 4.5 61 8-98 180-240 (353)
23 1cg2_A Carboxypeptidase G2; me 97.6 0.00011 3.8E-09 61.8 7.3 53 6-68 115-167 (393)
24 3n5f_A L-carbamoylase, N-carba 97.5 0.00015 5.2E-09 61.4 6.1 56 6-66 86-141 (408)
25 2gre_A Deblocking aminopeptida 97.5 0.00011 3.6E-09 61.5 5.1 63 8-98 184-246 (349)
26 2pok_A Peptidase, M20/M25/M40 97.4 0.00024 8.2E-09 61.5 7.0 52 6-67 143-194 (481)
27 3dlj_A Beta-Ala-His dipeptidas 97.4 0.0003 1E-08 61.1 7.5 69 6-94 139-207 (485)
28 2fvg_A Endoglucanase; TM1049, 97.4 0.0001 3.5E-09 61.3 3.6 59 8-96 165-223 (340)
29 1vgy_A Succinyl-diaminopimelat 97.3 0.0007 2.4E-08 56.9 8.5 56 6-70 99-154 (393)
30 2rb7_A Peptidase, M20/M25/M40 97.3 0.0002 6.8E-09 59.9 4.5 53 6-67 96-153 (364)
31 1lfw_A PEPV; hydrolase, dipept 97.1 0.00075 2.6E-08 57.9 6.6 52 6-67 115-166 (470)
32 3pfo_A Putative acetylornithin 97.1 0.00077 2.6E-08 57.2 6.2 50 7-66 141-190 (433)
33 1z2l_A Allantoate amidohydrola 97.0 0.00091 3.1E-08 56.6 5.8 57 6-67 90-146 (423)
34 3kl9_A PEPA, glutamyl aminopep 96.9 0.00049 1.7E-08 58.4 3.6 65 7-99 179-243 (355)
35 3pfe_A Succinyl-diaminopimelat 96.8 0.0026 8.7E-08 55.1 7.4 66 6-93 126-191 (472)
36 3isz_A Succinyl-diaminopimelat 96.8 0.004 1.4E-07 51.3 8.2 54 7-70 97-151 (377)
37 3tx8_A Succinyl-diaminopimelat 96.7 0.0019 6.4E-08 53.6 5.3 51 6-67 99-151 (369)
38 3gb0_A Peptidase T; NP_980509. 96.7 0.001 3.5E-08 55.3 3.4 46 9-65 107-152 (373)
39 3khx_A Putative dipeptidase sa 96.6 0.003 1E-07 55.1 5.9 53 6-68 134-186 (492)
40 2f7v_A Aectylcitrulline deacet 96.5 0.0033 1.1E-07 52.3 5.7 45 6-67 102-147 (369)
41 3rza_A Tripeptidase; phosphory 96.5 0.0017 5.7E-08 54.7 3.6 45 10-65 129-173 (396)
42 2v8h_A Beta-alanine synthase; 96.4 0.0032 1.1E-07 54.5 5.1 55 7-66 121-175 (474)
43 1xmb_A IAA-amino acid hydrolas 96.4 0.0051 1.7E-07 52.2 6.0 44 13-67 120-163 (418)
44 3ife_A Peptidase T; metallopep 96.3 0.0016 5.5E-08 55.6 2.6 48 7-65 163-210 (434)
45 1ysj_A Protein YXEP; M20 famil 96.1 0.015 5.3E-07 49.0 7.6 44 13-67 126-169 (404)
46 1fno_A Peptidase T; metallo pe 96.1 0.002 7E-08 54.4 2.1 45 9-65 139-183 (417)
47 1ylo_A Hypothetical protein SF 95.8 0.0098 3.3E-07 49.0 5.1 47 8-66 167-213 (348)
48 3io1_A Aminobenzoyl-glutamate 95.4 0.031 1E-06 47.9 6.8 44 13-67 153-196 (445)
49 2qyv_A XAA-His dipeptidase; YP 95.1 0.0089 3.1E-07 51.7 2.4 46 7-66 110-158 (487)
50 3mru_A Aminoacyl-histidine dip 94.8 0.01 3.6E-07 51.7 2.1 46 7-66 113-161 (490)
51 2vpu_A TET3, 354AA long hypoth 94.8 0.027 9.2E-07 47.7 4.4 63 7-99 182-244 (354)
52 3ram_A HMRA protein; two-domai 94.5 0.042 1.4E-06 46.3 4.9 43 15-67 99-143 (394)
53 1vho_A Endoglucanase; structur 94.2 0.017 5.7E-07 47.7 1.9 45 8-64 170-214 (346)
54 3cpx_A Aminopeptidase, M42 fam 93.4 0.051 1.8E-06 44.8 3.4 60 8-97 163-222 (321)
55 3isx_A Endoglucanase; TM1050, 90.3 0.083 2.9E-06 44.5 1.3 61 7-98 177-237 (343)
56 2ijz_A Probable M18-family ami 80.8 0.86 3E-05 39.4 2.7 74 4-102 227-315 (428)
57 2glf_A Probable M18-family ami 79.5 0.41 1.4E-05 41.8 0.3 34 7-47 246-279 (450)
58 1y7e_A Probable M18-family ami 78.5 0.27 9.2E-06 43.0 -1.2 36 7-47 252-287 (458)
59 3vat_A Dnpep, aspartyl aminope 73.5 0.71 2.4E-05 40.9 0.1 39 7-47 282-323 (496)
60 2glj_A Probable M18-family ami 72.9 1.4 4.7E-05 38.5 1.8 35 7-47 258-292 (461)
61 1wdd_S Ribulose bisphosphate c 28.4 59 0.002 23.6 3.7 36 4-47 72-107 (128)
62 1rbl_M Ribulose 1,5 bisphospha 27.7 64 0.0022 22.7 3.7 36 3-46 59-94 (109)
63 3zxw_B Ribulose bisphosphate c 27.6 63 0.0022 23.0 3.7 37 3-47 58-94 (118)
64 1svd_M Ribulose bisphosphate c 27.2 66 0.0023 22.6 3.7 36 3-46 61-96 (110)
65 1gk8_I Ribulose bisphosphate c 25.7 69 0.0024 23.6 3.7 36 4-47 79-114 (140)
66 1bwv_S Rubisco, protein (ribul 23.4 83 0.0028 23.0 3.7 37 3-47 53-89 (138)
67 1bxn_I Rubisco, protein (ribul 23.2 88 0.003 22.9 3.9 37 3-47 53-89 (139)
68 4f0h_B Ribulose bisphosphate c 20.3 1.3E+02 0.0043 22.1 4.2 37 3-47 53-89 (138)
No 1
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=2.1e-35 Score=251.26 Aligned_cols=153 Identities=44% Similarity=0.814 Sum_probs=132.5
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhc---cCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcc
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQ---LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKT 79 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~---~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~ 79 (162)
.+++||+|||||||+|||+||.|...+++ .+++++|+||||+|||.|.+|++++||+||++||++|.++++|+.+
T Consensus 127 ~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~-- 204 (330)
T 3pb6_X 127 TPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGP-- 204 (330)
T ss_dssp CCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCS--
T ss_pred cCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCcccc--
Confidence 46899999999999999999999874321 3689999999999999999999999999999999999988776544
Q ss_pred cccccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCCCCccCcccc
Q psy571 80 LTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 159 (162)
Q Consensus 80 ~~~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~~~~~~~F~~~~~~~~i~DDH~PF 159 (162)
.++++|+++|||||+|.+++.++.++.++.+++..+.+||+++++++.+..++. ...||++....+.+.|||+||
T Consensus 205 -~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~l~~i~~~~~~~g~~~~~p~----~~~~f~~~~~~~~~~SDH~pF 279 (330)
T 3pb6_X 205 -TRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQ----EVMYFQPGEPFGSVEDDHIPF 279 (330)
T ss_dssp -BTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHHHHHHHHHHHHHTTCCSSCCS----SCSSBCSSCSSCCCSCTTHHH
T ss_pred -chhhCeEEEEeccCCCCCCCCceeecCcchHHHHHHHHHHHHHHHcCccccCCc----ccccccccccCCCCCCchHhH
Confidence 478999999999999999999888888999999999999999999988876541 236887544567899999999
Q ss_pred cCC
Q psy571 160 YYR 162 (162)
Q Consensus 160 ~~r 162 (162)
+++
T Consensus 280 ~~~ 282 (330)
T 3pb6_X 280 LRR 282 (330)
T ss_dssp HTT
T ss_pred HHC
Confidence 874
No 2
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=5.2e-34 Score=241.49 Aligned_cols=151 Identities=50% Similarity=0.919 Sum_probs=123.4
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhc-cCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccc
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQ-LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLT 81 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~-~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~ 81 (162)
..++||+|||||||+|||+||.|++.+.+ .+++++|+||||||||....|++++++|||+|||+.|... .
T Consensus 122 ~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~~~~---------~ 192 (330)
T 4fai_A 122 VEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKWHHE---------G 192 (330)
T ss_dssp SCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHHHHT---------T
T ss_pred CCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHHhcchhc---------c
Confidence 46899999999999999999999886543 4789999999999999999999999999999999998764 4
Q ss_pred cccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCC---ccccccccccC-CCCCCccCcc
Q psy571 82 KLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNR---SKKLTYFREMS-TFPVAEDDHL 157 (162)
Q Consensus 82 ~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~---~~~~~~F~~~~-~~~~i~DDH~ 157 (162)
++++|.++|||||+|.+++.++.++..+.+++..+..+|++++..+.+....... .....+|.... .++.++|||+
T Consensus 193 ~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~ 272 (330)
T 4fai_A 193 KLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHI 272 (330)
T ss_dssp CSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC---------------CCEEEEEETTCCCCSTTH
T ss_pred chhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccccccccccccccccCCCCCCCCCchH
Confidence 6789999999999999999999999999999999999999999988876544211 11224555432 4567999999
Q ss_pred cccCC
Q psy571 158 PFYYR 162 (162)
Q Consensus 158 PF~~r 162 (162)
||+++
T Consensus 273 pF~~~ 277 (330)
T 4fai_A 273 PFLRR 277 (330)
T ss_dssp HHHTT
T ss_pred HHHHC
Confidence 99874
No 3
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=5.8e-33 Score=232.05 Aligned_cols=153 Identities=43% Similarity=0.719 Sum_probs=128.5
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhc---cCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCc-
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQ---LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGK- 78 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~---~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~- 78 (162)
..++||+|||||||+|||+||+|...+.+ .+|+++|+||||||||....|+++++|+||++||+.|.....+....
T Consensus 96 ~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~ 175 (312)
T 4f9u_A 96 PGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQL 175 (312)
T ss_dssp TTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHHHHCBC------
T ss_pred CCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHHHHHHhhcccccccc
Confidence 46899999999999999999999876432 46899999999999998899999999999999999887654322111
Q ss_pred ccccccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCCCCccCccc
Q psy571 79 TLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLP 158 (162)
Q Consensus 79 ~~~~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~~~~~~~F~~~~~~~~i~DDH~P 158 (162)
...++++|.++||+||+|.+++.+..++.++.+++..+.+++++++.++.+.+.. .+|.....++.+.|||.|
T Consensus 176 ~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~SDH~p 248 (312)
T 4f9u_A 176 APRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRTAGQLEGNN-------NMFLSRVSGGLVDDDHRP 248 (312)
T ss_dssp -CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTCSSSSC-------CCEEEEECSSCCCCTTHH
T ss_pred ccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHHhccccccc-------cccccccCCCCCCCchHH
Confidence 2357889999999999999999999999999999999999999999998887665 566655557789999999
Q ss_pred ccCC
Q psy571 159 FYYR 162 (162)
Q Consensus 159 F~~r 162 (162)
|+++
T Consensus 249 F~~~ 252 (312)
T 4f9u_A 249 FLDE 252 (312)
T ss_dssp HHTT
T ss_pred HHHC
Confidence 9874
No 4
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.96 E-value=7.4e-29 Score=209.29 Aligned_cols=156 Identities=46% Similarity=0.799 Sum_probs=125.3
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhc------cCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccC
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQ------LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHR 76 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~------~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~ 76 (162)
+.++||+||+||||+|||+||.|.....+ .+++++|+|+||++||.+..|++++|++||++|++.|.+.++|+.
T Consensus 120 ~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~ 199 (329)
T 2afw_A 120 RVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPG 199 (329)
T ss_dssp BCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTT
T ss_pred cCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCccc
Confidence 35789999999999999999999875311 157899999999999998889988899999999999988766654
Q ss_pred CcccccccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCCCCccCc
Q psy571 77 GKTLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDH 156 (162)
Q Consensus 77 ~~~~~~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~~~~~~~F~~~~~~~~i~DDH 156 (162)
+....++++|.++|||||+|..++.+..++..+.+++..+.+++++++..+.+.+.+ ....+|.+...++.+.|||
T Consensus 200 ~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~----~~~~~f~~~~~~g~~~sDh 275 (329)
T 2afw_A 200 ARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHS----LEGRYFQNYSYGGVIQDDH 275 (329)
T ss_dssp CSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGHHHHHHHHHHHHHHHHTTCSSSCC----STTCSBCSCCCCSCCCSTT
T ss_pred ccccccccceEEEEEeccCCCCCCceeeeccCcchHHHHHHHHHHHHHHcCCccCCC----cccccccccccCCCCCCCC
Confidence 433356889999999999999998887777778888888888999898887664322 1225676544355789999
Q ss_pred ccccCC
Q psy571 157 LPFYYR 162 (162)
Q Consensus 157 ~PF~~r 162 (162)
.||+++
T Consensus 276 ~~F~~~ 281 (329)
T 2afw_A 276 IPFLRR 281 (329)
T ss_dssp HHHHTT
T ss_pred HhHHHC
Confidence 999874
No 5
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.92 E-value=8.4e-26 Score=190.70 Aligned_cols=132 Identities=23% Similarity=0.316 Sum_probs=88.2
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc-cccccCC----CC-CccchHHHHHHHHhcccccC
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE-AFNEWSA----ED-SIWGARHLAAKWERSHLQHR 76 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE-~~~~w~~----~~-~l~GS~~~a~~~~~~~~~~~ 76 (162)
..++||+||+||||+|||+||.|.. .+++++|+|+||++|| .+++|+. +| +++||++|++.+.
T Consensus 122 ~~~~GA~D~~sGva~~Le~ar~l~~----~~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~------- 190 (314)
T 3gux_A 122 TPILGVNDGASGVGVLLEIARQIQK----EQPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPH------- 190 (314)
T ss_dssp --------CHHHHHHHHHHHHHHHH----SCCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCS-------
T ss_pred cccCCCcccHHHHHHHHHHHHHHHh----CCCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCc-------
Confidence 4578999999999999999999987 4689999999999999 5778865 23 4799999996532
Q ss_pred CcccccccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCCCCccCc
Q psy571 77 GKTLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDH 156 (162)
Q Consensus 77 ~~~~~~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~~~~~~~F~~~~~~~~i~DDH 156 (162)
.++.+|+++|||||+|.+++.++..+.++.+.. .+++.+++.....++. .+|++.. ++.+.|||
T Consensus 191 ----~~~~~~~~~inlDm~G~~~~~~~~~g~~~~~~~----~l~~~~~~~~~~~g~~-------~~f~~~~-~~~~~sDh 254 (314)
T 3gux_A 191 ----VQNYNARYGILLDMVGGKDATFYYEGYSARTAR----SEMKKIWKKAHELGYG-------KYFVKED-GGETVDDH 254 (314)
T ss_dssp ----STTCCCSEEEEEESCCBTTCCEEECTTHHHHCH----HHHHHHHHHHHHHTCT-------TTEEEEE-CCCCCCHH
T ss_pred ----ccccceeEEEEEeccCCCCCceeeeccccccHH----HHHHHHHHHHHHcCCc-------ccccccc-CCCCCCcc
Confidence 345789999999999999998877665443333 3333333322222544 6787654 66899999
Q ss_pred ccccC
Q psy571 157 LPFYY 161 (162)
Q Consensus 157 ~PF~~ 161 (162)
+||++
T Consensus 255 ~pF~~ 259 (314)
T 3gux_A 255 IYVNK 259 (314)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99986
No 6
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=7.5e-26 Score=189.26 Aligned_cols=132 Identities=25% Similarity=0.285 Sum_probs=95.1
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc-cccc---cC--CCCCccchHHHHHHHHhcccccC
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE-AFNE---WS--AEDSIWGARHLAAKWERSHLQHR 76 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE-~~~~---w~--~~~~l~GS~~~a~~~~~~~~~~~ 76 (162)
.+++||+|||||||+|||+||+|.. .+++++|+|||||||| .... |. ...+++||++|++...
T Consensus 120 ~~~~GA~D~aSG~a~lLE~ar~l~~----~~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~------- 188 (309)
T 4fuu_A 120 TPILGANDGASGVGALLEIARLVNQ----QQPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPH------- 188 (309)
T ss_dssp SCCCCTTTTHHHHHHHHHHHHHHHH----SCCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCS-------
T ss_pred CCcCCcccCchhHHHHHHHHHHHhh----cCCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhccc-------
Confidence 4689999999999999999999987 5789999999999999 3222 21 2235799999985421
Q ss_pred CcccccccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCCCCccCc
Q psy571 77 GKTLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDH 156 (162)
Q Consensus 77 ~~~~~~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~~~~~~~F~~~~~~~~i~DDH 156 (162)
.++.+|.++|||||+|.+++.+........ .+..+.+.+.+.....++. ..|.... +..+.|||
T Consensus 189 ----~~~~~i~~~inlDmvG~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~sDh 252 (309)
T 4fuu_A 189 ----VQGYNARFGILLDMVGGENSVFLKEGYSEE----FAPDINKKVWKAAKKAGYG-------KTFIDER-GDTITDDH 252 (309)
T ss_dssp ----STTCCCSEEEEECSCCBTTCCEEECHHHHH----HCHHHHHHHHHHHHHTTCT-------TTEEEEE-CCCCCCHH
T ss_pred ----ccCcceEEEEeeeccCCCCCceEeecCchh----hhHHHHHHHHHHHHhcCCc-------ccccccC-CCCCCCCh
Confidence 456789999999999999987665433222 2234455555544443443 3454433 56789999
Q ss_pred ccccC
Q psy571 157 LPFYY 161 (162)
Q Consensus 157 ~PF~~ 161 (162)
.||.+
T Consensus 253 ~~F~~ 257 (309)
T 4fuu_A 253 LFINR 257 (309)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 7
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.91 E-value=5.2e-25 Score=185.15 Aligned_cols=132 Identities=25% Similarity=0.306 Sum_probs=100.4
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc-cccccCCC---C-CccchHHHHHHHHhcccccCC
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE-AFNEWSAE---D-SIWGARHLAAKWERSHLQHRG 77 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE-~~~~w~~~---~-~l~GS~~~a~~~~~~~~~~~~ 77 (162)
..|+||+|||||||+|||+||.|.. .+++++|.|+||++|| .+++|++. | +++||++|++.+.
T Consensus 120 ~~~~Ga~D~~sGva~~Le~ar~l~~----~~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~-------- 187 (309)
T 3tc8_A 120 TPLDGADDGGSGVGALLEIARQIGQ----KAPGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPH-------- 187 (309)
T ss_dssp SCCCCTTTTHHHHHHHHHHHHHHHH----SCCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCS--------
T ss_pred ccccCcccchHhHHHHHHHHHHHHh----CCCCCcEEEEEECccccccccccccccccccchhHHHHHhCCC--------
Confidence 5678999999999999999999987 4589999999999999 57888752 3 4799999996532
Q ss_pred cccccccceeeEEEeccCCCCCCcccccCCCchHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCCCCccCcc
Q psy571 78 KTLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTAQGLLNMVNSNRSKKLTYFREMSTFPVAEDDHL 157 (162)
Q Consensus 78 ~~~~~l~~i~~~i~lDmvG~~~~~~~~~~~~t~~~~~~l~~ie~~l~~~~~l~~~~~~~~~~~~~F~~~~~~~~i~DDH~ 157 (162)
.++.+|+++|||||+|.+++.|+.++.++.+....+..+++.++.+ ++. .+|+... ++.+.|||+
T Consensus 188 ---~~~~~~~~~inlD~~G~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~----g~~-------~~f~~~~-~g~~~sDh~ 252 (309)
T 3tc8_A 188 ---VPNYTAEYGILLDMVGGKNATFFKEQQSLRAAAPIVEMVWSAARDL----GYG-------KYFINAA-GGAITDDHQ 252 (309)
T ss_dssp ---STTCCCSEEEEEESCCBTTCCEEECHHHHHHHHHHHHHHHHHHHHH----TCT-------TTEEEEE-CCCCCCHHH
T ss_pred ---ccccceEEEEEecccCCCCCceeecccccchHHHHHHHHHHHHHHc----CCc-------ceeccCC-CCCCCCccH
Confidence 3457899999999999999988776544433333333443333322 444 5787654 678999999
Q ss_pred cccC
Q psy571 158 PFYY 161 (162)
Q Consensus 158 PF~~ 161 (162)
||.+
T Consensus 253 ~f~~ 256 (309)
T 3tc8_A 253 YVIS 256 (309)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
No 8
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.66 E-value=1.4e-16 Score=139.23 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=65.5
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 85 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~ 85 (162)
+||+||+||||+|||+||.|...- .+++++|+|+||++|| .|++||++|++.+. .++.+
T Consensus 265 ~Ga~D~~sG~a~~le~a~~l~~~~--~~~~~~i~f~~~~~EE--------~gl~Gs~~~~~~~~-----------~~~~~ 323 (444)
T 3iib_A 265 TGAIDDGAGVAIVTAAAKHILDLP--QKPERTIRVVLYAAEE--------LGLLGGKTYAKEHE-----------AELEK 323 (444)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHTSS--SCCSEEEEEEEESCGG--------GTSHHHHHHHHHTG-----------GGGGG
T ss_pred CCCccchHHHHHHHHHHHHHHhcC--CCCCCeEEEEEECCcc--------cCCcCHHHHHHhhH-----------hhhhc
Confidence 699999999999999999998741 3688999999999999 79999999998753 35678
Q ss_pred eeeEEEeccCCCCCCcc
Q psy571 86 MDMLVLLDLLGTSNPRF 102 (162)
Q Consensus 86 i~~~i~lDmvG~~~~~~ 102 (162)
+.++||+||+|.+...+
T Consensus 324 ~~~~~n~D~~~~~~~~~ 340 (444)
T 3iib_A 324 HYIAAESDFGAGPIYQI 340 (444)
T ss_dssp EEEEEECCSTTCCEEEE
T ss_pred eeEEEECcCCCCcceEE
Confidence 99999999998775443
No 9
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.59 E-value=3.5e-15 Score=122.89 Aligned_cols=77 Identities=17% Similarity=0.317 Sum_probs=64.5
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 85 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~ 85 (162)
+||.|+++|||+||++||.|.... .+++++|.|+||++|| .|+.||+++++.+.. ..+++
T Consensus 93 ~Ga~D~~~g~a~~l~~~~~l~~~~--~~~~~~i~~~~~~~EE--------~g~~Gs~~~~~~~~~----------~~~~~ 152 (284)
T 1tkj_A 93 AGINDNGSGSAAVLETALAVSRAG--YQPDKHLRFAWWGAEE--------LGLIGSKFYVNNLPS----------ADRSK 152 (284)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHTT--CCCSEEEEEEEESCGG--------GTSHHHHHHHHHSCH----------HHHTT
T ss_pred CCCccChHHHHHHHHHHHHHHhcC--CCCCceEEEEEECCcc--------cCCcCHHHHHhhCcc----------chhhc
Confidence 489999999999999999998731 3578999999999999 689999999976432 23468
Q ss_pred eeeEEEeccCCCCCCcc
Q psy571 86 MDMLVLLDLLGTSNPRF 102 (162)
Q Consensus 86 i~~~i~lDmvG~~~~~~ 102 (162)
|+++||+||+|..+..+
T Consensus 153 ~~~~i~~D~~g~~~~~~ 169 (284)
T 1tkj_A 153 LAGYLNFDMIGSPNPGY 169 (284)
T ss_dssp EEEEEEECCCCCSSCCC
T ss_pred EEEEEEecCCCCCCCCe
Confidence 99999999999887543
No 10
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.58 E-value=7.7e-15 Score=121.50 Aligned_cols=74 Identities=18% Similarity=0.278 Sum_probs=63.8
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccc
Q psy571 5 FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLD 84 (162)
Q Consensus 5 f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~ 84 (162)
..||.||++|||+|||+||.|...- .+++++|.|+||++|| .|+.||+++++.+.. ++.
T Consensus 112 ~~Ga~D~~~g~a~~l~~~~~l~~~~--~~~~~~i~~~~~~~EE--------~g~~Gs~~~~~~~~~-----------~~~ 170 (299)
T 1rtq_A 112 APGADDDASGIAAVTEVIRVLSENN--FQPKRSIAFMAYAAEE--------VGLRGSQDLANQYKS-----------EGK 170 (299)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHTT--CCCSEEEEEEEESCGG--------GTSHHHHHHHHHHHH-----------TTC
T ss_pred cCCCcccHHHHHHHHHHHHHHHHcC--CCCCceEEEEEECCcc--------CCchhHHHHHHhhhh-----------ccc
Confidence 5899999999999999999998731 3578999999999999 689999999987653 356
Q ss_pred ceeeEEEeccCCCCC
Q psy571 85 RMDMLVLLDLLGTSN 99 (162)
Q Consensus 85 ~i~~~i~lDmvG~~~ 99 (162)
+++++||+||+|.++
T Consensus 171 ~~~~~i~~D~~g~~g 185 (299)
T 1rtq_A 171 NVVSALQLDMTNYKG 185 (299)
T ss_dssp EEEEEEECSCCSCCC
T ss_pred cEEEEEEecCCCCCC
Confidence 799999999998753
No 11
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.58 E-value=4.1e-15 Score=135.84 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=65.7
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHhhc--cCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccc
Q psy571 5 FIGATDSAVPCAMLLYIARLMRQELSQ--LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTK 82 (162)
Q Consensus 5 f~GA~DnAsg~A~lLeiAr~l~~~~~~--~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~ 82 (162)
.+||+||+||||+|||+||.|.....+ .+|+++|+|++|+||| .||+||++|++.+.. ..
T Consensus 293 ~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE--------~gl~GS~~~~~~~~~----------~l 354 (640)
T 3kas_A 293 GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGD--------FGSVGATEWLEGYLS----------SL 354 (640)
T ss_dssp SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGG--------GTSHHHHHHHHHTTT----------TG
T ss_pred CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcc--------cCchhHHHHHHhhhh----------hh
Confidence 579999999999999999999985311 4789999999999999 799999999976422 11
Q ss_pred ccceeeEEEeccCCCCCCcc
Q psy571 83 LDRMDMLVLLDLLGTSNPRF 102 (162)
Q Consensus 83 l~~i~~~i~lDmvG~~~~~~ 102 (162)
.++|.++||+||+|..+..+
T Consensus 355 ~~~~~a~iNlD~~~~G~~~l 374 (640)
T 3kas_A 355 HLKAFTYINLDKAVLGTSNF 374 (640)
T ss_dssp GGTEEEEEECTTCBSCSSEE
T ss_pred hhCEEEEEecccCccCCCce
Confidence 26899999999998765433
No 12
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.57 E-value=6.1e-15 Score=128.84 Aligned_cols=67 Identities=18% Similarity=0.307 Sum_probs=57.6
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccce
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRM 86 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i 86 (162)
+|||||||+|++||+||.|+. .+++++++||||+ +++||++|+++.. ..+++|
T Consensus 193 ~ANDNaSG~a~lleLar~l~~----~~~~~t~rFvf~p------------g~iGS~~yl~~~~-----------~~l~~i 245 (435)
T 3k9t_A 193 MCNDNLSGVALITFIAKALSK----LKTKYSYRFLFAP------------ETIGSITWLSRNE-----------DKLKNI 245 (435)
T ss_dssp CTTTTHHHHHHHHHHHHHHTT----SCCSSEEEEEEEC------------TTHHHHHHHHHCG-----------GGGGGE
T ss_pred CCCccchHHHHHHHHHHHHhc----CCCCceEEEEEcC------------ccHHHHHHHHhCh-----------Hhhhce
Confidence 499999999999999999986 5689999999996 3579999986521 357799
Q ss_pred eeEEEeccCCCCCC
Q psy571 87 DMLVLLDLLGTSNP 100 (162)
Q Consensus 87 ~~~i~lDmvG~~~~ 100 (162)
++++||||||..+.
T Consensus 246 ~a~lnLDmVGd~~~ 259 (435)
T 3k9t_A 246 KMGLVATCVGDAGI 259 (435)
T ss_dssp EEEEECCSCCSSSC
T ss_pred EEEEEEEEecCCCC
Confidence 99999999999875
No 13
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.55 E-value=9.4e-15 Score=134.75 Aligned_cols=82 Identities=21% Similarity=0.141 Sum_probs=68.0
Q ss_pred CccCCCCCchHHHHHHHHHHHHHHHhhc-cCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccc
Q psy571 4 PFIGATDSAVPCAMLLYIARLMRQELSQ-LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTK 82 (162)
Q Consensus 4 ~f~GA~DnAsg~A~lLeiAr~l~~~~~~-~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~ 82 (162)
...||+||+||||+|||+||.|....++ .+++++|+|++|+||| .||.||++|++.+.. ..
T Consensus 338 ~~~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE--------~Gl~GS~~~~~~~~~----------~~ 399 (707)
T 3fed_A 338 WVFGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEE--------FGLLGSTEWAEENVK----------IL 399 (707)
T ss_dssp SSSCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGG--------GTSHHHHHHHHHHHH----------HH
T ss_pred CCCCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCcc--------ccchhHHHHHHhcch----------hh
Confidence 3579999999999999999999885322 3789999999999999 799999999987543 13
Q ss_pred ccceeeEEEeccCCCCCCccc
Q psy571 83 LDRMDMLVLLDLLGTSNPRFY 103 (162)
Q Consensus 83 l~~i~~~i~lDmvG~~~~~~~ 103 (162)
.++|.++||+||.|..+..+.
T Consensus 400 ~~~~~a~iNlD~~~~g~~~~~ 420 (707)
T 3fed_A 400 QERSIAYINSDSSIEGNYTLR 420 (707)
T ss_dssp HHHEEEEEECSCSBSCSSEEE
T ss_pred hhCEEEEEEecccccCCceEE
Confidence 468999999999998764433
No 14
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.49 E-value=1.3e-14 Score=125.51 Aligned_cols=73 Identities=30% Similarity=0.487 Sum_probs=63.5
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 85 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~ 85 (162)
+||+||++|||+|||+||.|.. .+++++|.|+||++|| .|++||++|++.+.. ..+++
T Consensus 236 ~Ga~D~~~G~a~~le~~~~l~~----~~~~~~i~~~~~~~EE--------~g~~Gs~~~~~~~~~----------~~~~~ 293 (421)
T 2ek8_A 236 PGANDDASGVAVTLELARVMSK----LKTDTELRFITFGAEE--------NGLIGSKKYAASLSE----------DEIKR 293 (421)
T ss_dssp CCTTTTHHHHHHHHHHHHHHTT----SCCSSEEEEEEESSST--------TTSHHHHHHHTTCCH----------HHHHH
T ss_pred CCCCCCcHhHHHHHHHHHHHhc----cCCCceEEEEEECCcc--------ccchhHHHHHHhCcc----------chhhc
Confidence 5999999999999999999987 4578999999999999 799999999965322 24678
Q ss_pred eeeEEEeccCCCCCC
Q psy571 86 MDMLVLLDLLGTSNP 100 (162)
Q Consensus 86 i~~~i~lDmvG~~~~ 100 (162)
|.++||+||+|.++.
T Consensus 294 ~~~~in~D~~g~~~~ 308 (421)
T 2ek8_A 294 TIGMFQLDMVGSKDA 308 (421)
T ss_dssp EEEEEEECSCCBTTS
T ss_pred EEEEEEecccCCCCC
Confidence 999999999999775
No 15
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=98.17 E-value=5.3e-06 Score=66.98 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=56.1
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCc-cchHHHHHHHHhcccccCCccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI-WGARHLAAKWERSHLQHRGKTLTKLD 84 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l-~GS~~~a~~~~~~~~~~~~~~~~~l~ 84 (162)
.||.|+.+|||++|++++.|.... .+++.+|.|+|...|| .+. .||+++++.+.+. ..
T Consensus 99 ~G~~D~k~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~~Ga~~~~~~~~~~-----------~~ 157 (268)
T 3t68_A 99 RGAADMKGSLACMIVAVERFIAEH--PDHQGSIGFLITSDEE--------GPFINGTVRVVETLMAR-----------NE 157 (268)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCTT--------SSSCCHHHHHHHHHHHT-----------TC
T ss_pred cCcccchHHHHHHHHHHHHHHHhC--CCCCCcEEEEEEeCCc--------cCcccCHHHHHHHHHhc-----------CC
Confidence 399999999999999999997641 2457899999999999 555 6999999876543 13
Q ss_pred ceeeEEEeccCCC
Q psy571 85 RMDMLVLLDLLGT 97 (162)
Q Consensus 85 ~i~~~i~lDmvG~ 97 (162)
+++++|++|.-+.
T Consensus 158 ~~d~~i~~ept~~ 170 (268)
T 3t68_A 158 LIDMCIVGEPSST 170 (268)
T ss_dssp CCCEEEECSCCBS
T ss_pred CCCEEEEeCCCCC
Confidence 5688888886543
No 16
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=98.15 E-value=6.9e-06 Score=66.43 Aligned_cols=70 Identities=16% Similarity=0.125 Sum_probs=55.5
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCc-cchHHHHHHHHhcccccCCccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI-WGARHLAAKWERSHLQHRGKTLTKLD 84 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l-~GS~~~a~~~~~~~~~~~~~~~~~l~ 84 (162)
.||.|+.+|||++|++++.|.... .+++.+|.|+|+..|| .+. +||+++++.+.+. ..
T Consensus 99 rG~~D~k~g~a~~l~a~~~l~~~~--~~~~~~i~~~~~~~EE--------~g~~~Ga~~~~~~~~~~-----------~~ 157 (269)
T 4h2k_A 99 RGAADMKGSLAAMIVAAEEYVKAN--PNHKGTIALLITSDEE--------ATAKDGTIHVVETLMAR-----------DE 157 (269)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCSS--------SCCTTSHHHHHHHHHHT-----------TC
T ss_pred CCcccChHHHHHHHHHHHHHHHhC--CCCCccEEEEEEeccc--------cCcccCHHHHHHHHHhc-----------CC
Confidence 399999999999999999998641 2457899999999999 555 5999999876543 13
Q ss_pred ceeeEEEeccCC
Q psy571 85 RMDMLVLLDLLG 96 (162)
Q Consensus 85 ~i~~~i~lDmvG 96 (162)
+++++|++|.-+
T Consensus 158 ~~d~~i~~Ept~ 169 (269)
T 4h2k_A 158 KITYCMVGEPSS 169 (269)
T ss_dssp CCCEEEECCCCB
T ss_pred CCCEEEEECCCC
Confidence 567888887654
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=97.95 E-value=8.5e-06 Score=63.12 Aligned_cols=52 Identities=19% Similarity=0.160 Sum_probs=44.3
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCC-ccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDS-IWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~-l~GS~~~a~~ 67 (162)
.||.|+.+|||++|++++.|...- .+++.+|.|+|+..|| .| +.|++++++.
T Consensus 109 rGa~D~K~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~~Ga~~~~~~ 161 (198)
T 1q7l_A 109 RGAQDMKCVSIQYLEAVRRLKVEG--HRFPRTIHMTFVPDEE--------VGGHQGMELFVQR 161 (198)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTT--CCCSSCEEEEEESCGG--------GTSTTTHHHHTTS
T ss_pred CcchhchHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEcccc--------cCccccHHHHHHh
Confidence 589999999999999999998731 2467899999999999 54 7899999854
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=97.87 E-value=1.3e-05 Score=67.87 Aligned_cols=62 Identities=19% Similarity=0.142 Sum_probs=50.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccccee
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 87 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i~ 87 (162)
|.||.+|||++|++++.|.. ..++.+|.|+|++.|| .|+.|+++++..+ +.+
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~----~~~~~~v~~~~~~~EE--------~G~~G~~~~~~~~----------------~~d 233 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQN----TDHPNIVYGVGTVQEE--------VGLRGAKTAAHTI----------------QPD 233 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHT----SCCSSEEEEEEESCCT--------TTSHHHHHHHHHH----------------CCS
T ss_pred cCccHHHHHHHHHHHHHHhh----cCCCceEEEEEECCcc--------cChhhHHHHhccc----------------CCC
Confidence 89999999999999999976 3466899999999999 7889999886431 135
Q ss_pred eEEEeccCCC
Q psy571 88 MLVLLDLLGT 97 (162)
Q Consensus 88 ~~i~lDmvG~ 97 (162)
++|++|+.+.
T Consensus 234 ~~i~~d~~~~ 243 (373)
T 1vhe_A 234 IAFGVDVGIA 243 (373)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEecccc
Confidence 6788887654
No 19
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=97.78 E-value=6.7e-06 Score=68.14 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=51.2
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccccee
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 87 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i~ 87 (162)
|.||.+|||++|++++.|.. ..++.+|.|+|++.|| .|+.||+++++. -+.+
T Consensus 171 a~D~k~g~a~~l~a~~~l~~----~~~~~~i~~~~~~~EE--------~G~~G~~~~~~~----------------~~~~ 222 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVD----HELEGKVIFAFTVQEE--------VGLKGAKFLANH----------------YYPQ 222 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTT----SCCSSEEEEEEESCGG--------GTSHHHHHHTTT----------------CCCS
T ss_pred cCCcHHHHHHHHHHHHHHhh----cCCCceEEEEEECccc--------cCcchHHHHhcc----------------cCCC
Confidence 79999999999999999876 3466899999999999 678899888621 1246
Q ss_pred eEEEeccCCCC
Q psy571 88 MLVLLDLLGTS 98 (162)
Q Consensus 88 ~~i~lDmvG~~ 98 (162)
++|++|+.+..
T Consensus 223 ~~i~~d~~~~~ 233 (332)
T 2wyr_A 223 YAFAIDSFACC 233 (332)
T ss_dssp EEEEECCEECC
T ss_pred EEEEEeccccc
Confidence 78999987754
No 20
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=97.71 E-value=6e-05 Score=64.99 Aligned_cols=69 Identities=17% Similarity=0.125 Sum_probs=51.9
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 85 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~ 85 (162)
.||.|+-.|+|++|++++.|.... .+++.+|.|+|+.+|| .|..|++++++..... -+.+
T Consensus 132 rGa~D~K~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~Ga~~~~~~~~~~----------~~~~ 191 (479)
T 2zog_A 132 RGSTDDKGPVAGWMNALEAYQKTG--QEIPVNLRFCLEGMEE--------SGSEGLDELIFAQKDK----------FFKD 191 (479)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCGG--------GTCTTHHHHHHHTTTT----------TTTT
T ss_pred eccccChHHHHHHHHHHHHHHHhC--CCCCCcEEEEEecccc--------cCCccHHHHHHhhhhh----------hccc
Confidence 478999999999999999998731 3467899999999999 5668999988653210 1234
Q ss_pred eeeEEEecc
Q psy571 86 MDMLVLLDL 94 (162)
Q Consensus 86 i~~~i~lDm 94 (162)
++++|++|-
T Consensus 192 ~d~~i~~e~ 200 (479)
T 2zog_A 192 VDYVCISDN 200 (479)
T ss_dssp CCEEEECCC
T ss_pred CCEEEEeCC
Confidence 566676663
No 21
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.71 E-value=4.4e-05 Score=63.74 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=43.5
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCC-CccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAED-SIWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~-~l~GS~~~a~~ 67 (162)
.|+.|+.+|+|++|++++.|... +++.+|.|+|+.+|| . ++.||+++++.
T Consensus 101 ~G~~D~k~g~a~~l~a~~~l~~~----~~~~~v~~~~~~~EE--------~~g~~G~~~~~~~ 151 (356)
T 3ct9_A 101 LGSNDAGASVVSLLQVFLQLCRT----SQNYNLIYLASCEEE--------VSGKEGIESVLPG 151 (356)
T ss_dssp TTTTTTHHHHHHHHHHHHHHTTS----CCSSEEEEEEECCGG--------GTCTTTHHHHGGG
T ss_pred cCcccchHHHHHHHHHHHHHHhc----CCCCCEEEEEEeCcc--------cCCccCHHHHHhh
Confidence 48889999999999999999873 377899999999999 5 67899988754
No 22
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=97.65 E-value=3.5e-05 Score=64.46 Aligned_cols=61 Identities=20% Similarity=0.189 Sum_probs=50.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccccee
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 87 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i~ 87 (162)
|.|+.+|||++|++++.|.. ++.+|.|+|++.|| .|+.||++++..+ +.+
T Consensus 180 a~D~k~g~a~~l~a~~~l~~------~~~~i~~~~~~~EE--------~g~~G~~~~~~~~----------------~~~ 229 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD------AKADVYFVATVQEE--------VGLRGARTSAFGI----------------EPD 229 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS------CSSEEEEEEESCCT--------TTSHHHHHHHHHH----------------CCS
T ss_pred cCccHHHHHHHHHHHHHhhc------CCCeEEEEEECCcc--------cchhHHHHHhhcc----------------CCC
Confidence 89999999999999998753 56789999999999 7889999887431 246
Q ss_pred eEEEeccCCCC
Q psy571 88 MLVLLDLLGTS 98 (162)
Q Consensus 88 ~~i~lDmvG~~ 98 (162)
++|++|+.+..
T Consensus 230 ~~i~~d~~~~~ 240 (353)
T 1y0y_A 230 YGFAIDVTIAA 240 (353)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEeccccc
Confidence 78899987653
No 23
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=97.63 E-value=0.00011 Score=61.83 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=44.1
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKW 68 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~ 68 (162)
.|+.|+-.|||++|++++.|...- .++..+|.|+|..+|| .+..|++++++..
T Consensus 115 rG~~D~k~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~G~~~~~~~~ 167 (393)
T 1cg2_A 115 PGIADDKGGNAVILHTLKLLKEYG--VRDYGTITVLFNTDEE--------KGSFGSRDLIQEE 167 (393)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCGG--------GTTTTTHHHHHHH
T ss_pred CCcccchHHHHHHHHHHHHHHhcC--CCCCCCEEEEEEcccc--------cCCccHHHHHHHH
Confidence 588999999999999999998731 2345699999999999 5678999998753
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=97.48 E-value=0.00015 Score=61.37 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=44.0
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 66 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~ 66 (162)
-|+.|+.+|||++|++++.|...- .+++.+|.|+|+.+||.-. -..++.||++++.
T Consensus 86 ~g~~d~~~g~a~~l~~~~~l~~~~--~~~~~~i~~~~~~~EE~~~---~~~g~~Gs~~~~~ 141 (408)
T 3n5f_A 86 GGCFDGPLGVLAGVEVVQTMNEHG--VVTHHPIEVVAFTDEEGAR---FRFGMIGSRAMAG 141 (408)
T ss_dssp BCSSTTHHHHHHHHHHHHHHHHTT--CCCSSCEEEEEESCSSCTT---TTCCCHHHHHHHT
T ss_pred CCccCCHHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEcCccccc---cCCCCcCHHHHHc
Confidence 378899999999999999998741 3477899999999999200 0026889999973
No 25
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=97.48 E-value=0.00011 Score=61.50 Aligned_cols=63 Identities=16% Similarity=0.213 Sum_probs=48.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccccee
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 87 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i~ 87 (162)
|.||.+|||++|++++.|...- .+++.+|.|+|+..|| .|+.|++++ . -+.+
T Consensus 184 ~~D~k~g~a~~l~a~~~l~~~~--~~~~~~i~~~~~~~EE--------~G~~g~~~~-----~-------------~~~~ 235 (349)
T 2gre_A 184 HLDDKVSVAILLKLIKRLQDEN--VTLPYTTHFLISNNEE--------IGYGGNSNI-----P-------------EETV 235 (349)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHT--CCCSEEEEEEEESCC------------CCCCCC-----C-------------TTEE
T ss_pred eccchHHHHHHHHHHHHHHhcc--CCCCceEEEEEECccc--------CCchhhccc-----c-------------cCCC
Confidence 7999999999999999997631 2467899999999999 677888754 1 1368
Q ss_pred eEEEeccCCCC
Q psy571 88 MLVLLDLLGTS 98 (162)
Q Consensus 88 ~~i~lDmvG~~ 98 (162)
++|++|+.+..
T Consensus 236 ~~i~~D~~~~~ 246 (349)
T 2gre_A 236 EYLAVDMGALG 246 (349)
T ss_dssp EEEEECCCCCS
T ss_pred EEEEEeccccc
Confidence 89999998764
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=97.44 E-value=0.00024 Score=61.48 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=43.8
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
.|+.|+-+|||++|++++.|.... ..++.+|.|+|+.+|| .|..|++++++.
T Consensus 143 rG~~D~k~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~g~~~~~~~ 194 (481)
T 2pok_A 143 RGVDDDKGHITARLSALRKYMQHH--DDLPVNISFIMEGAEE--------SASTDLDKYLEK 194 (481)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTC--SSCSSEEEEEEESCGG--------GTTTTHHHHHHH
T ss_pred cccccCcHHHHHHHHHHHHHHHhc--CCCCCCEEEEEecccc--------cCchhHHHHHHH
Confidence 478999999999999999998731 2467899999999999 566799888765
No 27
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=97.43 E-value=0.0003 Score=61.07 Aligned_cols=69 Identities=20% Similarity=0.189 Sum_probs=53.1
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 85 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~ 85 (162)
.|+.|+-.|+|++|.+++.|.... .+++.+|.|+|..+|| .+..|++++.+.... .-+++
T Consensus 139 rG~~D~k~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~g~~~~~~~~~~----------~~~~~ 198 (485)
T 3dlj_A 139 RGATDNKGPVLAWINAVSAFRALE--QDLPVNIKFIIEGMEE--------AGSVALEELVEKEKD----------RFFSG 198 (485)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCGG--------GTTTTHHHHHHHHTT----------TTSTT
T ss_pred cccccCcHHHHHHHHHHHHHHHhC--CCCCccEEEEEEcccc--------cCCccHHHHHHhhhh----------hcccC
Confidence 589999999999999999998741 2567899999999999 556799988865321 11345
Q ss_pred eeeEEEecc
Q psy571 86 MDMLVLLDL 94 (162)
Q Consensus 86 i~~~i~lDm 94 (162)
++++|.+|-
T Consensus 199 ~d~~~~~~~ 207 (485)
T 3dlj_A 199 VDYIVISDN 207 (485)
T ss_dssp CCEEEECCC
T ss_pred CCEEEEcCC
Confidence 777777774
No 28
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.37 E-value=0.0001 Score=61.32 Aligned_cols=59 Identities=14% Similarity=0.223 Sum_probs=43.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccccee
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 87 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i~ 87 (162)
|.||.+|||++|++++.|. +++.+|.|+|++.|| .|+.|++++++.+ +.+
T Consensus 165 a~D~k~g~a~~l~a~~~l~------~~~~~i~~~~~~~EE--------~G~~G~~~~~~~~----------------~~~ 214 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV------SPAYDTYFVFTVQEE--------TGLRGSAVVVEQL----------------KPT 214 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC------CCSEEEEEEEECCCC-------------CHHHHHHH----------------CCS
T ss_pred cCccHHHHHHHHHHHHHhh------ccCCcEEEEEEcccc--------cchhhhHHHhhcc----------------CCC
Confidence 7999999999999999885 356789999999999 7889999988631 125
Q ss_pred eEEEeccCC
Q psy571 88 MLVLLDLLG 96 (162)
Q Consensus 88 ~~i~lDmvG 96 (162)
++|++|+.+
T Consensus 215 ~~i~~d~~~ 223 (340)
T 2fvg_A 215 CAIVVETTT 223 (340)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeccc
Confidence 678888754
No 29
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=97.34 E-value=0.0007 Score=56.86 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=45.3
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHh
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWER 70 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~ 70 (162)
.|+.|+-.|+|++|+.++.|.... .+++.+|.|+|+.+||. .++.|++++++.+..
T Consensus 99 rG~~D~k~~~aa~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~-------~~~~Ga~~~~~~~~~ 154 (393)
T 1vgy_A 99 RGAADMKTSIACFVTACERFVAKH--PNHQGSIALLITSDEEG-------DALDGTTKVVDVLKA 154 (393)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCSSS-------CCTTSHHHHHHHHHH
T ss_pred cCcccchHHHHHHHHHHHHHHHhc--CCCCCcEEEEEEecccc-------CCcCCHHHHHHHHHh
Confidence 378899999999999999887642 34678999999999992 247899999876543
No 30
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=97.29 E-value=0.0002 Score=59.92 Aligned_cols=53 Identities=25% Similarity=0.210 Sum_probs=41.6
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCC---Ccc--eEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQ---NLG--LDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~---~~~--i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
.|+.|+.+|+|++|++++.|...- .+. +.+ |.|+|..+||. .++.|++++++.
T Consensus 96 rG~~D~k~~~a~~l~a~~~l~~~~--~~~~~~~g~~~v~~~~~~~EE~-------~g~~G~~~~~~~ 153 (364)
T 2rb7_A 96 RGANDDKYAVALGLVMFRDRLNAL--KAAGRSQKDMALGLLITGDEEI-------GGMNGAAKALPL 153 (364)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHH--HHTTCCGGGCCEEEEEESCGGG-------TSTTTHHHHGGG
T ss_pred cccccccHHHHHHHHHHHHHHHhC--CCCcccCCCccEEEEEEecccc-------CchhhHHHHHhc
Confidence 378899999999999999998741 123 346 99999999992 257899988744
No 31
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=97.13 E-value=0.00075 Score=57.93 Aligned_cols=52 Identities=17% Similarity=0.228 Sum_probs=44.2
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
.|+.|+-.|+|++|++++.|...- .+++.+|.|+|+.+|| .+..|++++++.
T Consensus 115 rG~~D~K~~~a~~l~a~~~l~~~~--~~~~~~i~~i~~~~EE--------~g~~G~~~~~~~ 166 (470)
T 1lfw_A 115 RGSADDKGPSLTAYYGMLLLKEAG--FKPKKKIDFVLGTNEE--------TNWVGIDYYLKH 166 (470)
T ss_dssp TTSSSSHHHHHHHHHHHHHHHHHT--CCCSSEEEEEEESCTT--------TTCHHHHHHHHH
T ss_pred CCcccChHHHHHHHHHHHHHHHcC--CCCCCCEEEEEecCcc--------cCCccHHHHHHh
Confidence 478999999999999999998741 3467899999999999 567899998865
No 32
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=97.09 E-value=0.00077 Score=57.16 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=41.7
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHH
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 66 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~ 66 (162)
|+.|+-+|+|++|++++.|.... .+++.+|.|+|..+|| .+..|++++.+
T Consensus 141 G~~D~k~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~g~~G~~~~~~ 190 (433)
T 3pfo_A 141 GAQDMKGGVSAMIFALDAIRTAG--YAPDARVHVQTVTEEE--------STGNGALSTLM 190 (433)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTT--EEESSCEEEEEESCTT--------TTCHHHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHHHcC--CCCCccEEEEEEecCc--------cCChhHHHHHh
Confidence 89999999999999999998731 2457789999999999 55578887763
No 33
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=97.00 E-value=0.00091 Score=56.62 Aligned_cols=57 Identities=11% Similarity=0.154 Sum_probs=44.5
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
-|..|+..|+|++|++++.|.... .+++.+|.|+|+.+||.-. ...++.||++++..
T Consensus 90 ~g~~D~k~g~a~~l~a~~~l~~~~--~~~~~~v~~i~~~~EE~~~---~~~g~~Gs~~~~~~ 146 (423)
T 1z2l_A 90 GGNLDGQFGALAAWLAIDWLKTQY--GAPLRTVEVVAMAEEEGSR---FPYVFWGSKNIFGL 146 (423)
T ss_dssp BCSSTTHHHHHHHHHHHHHHHHHH--CSCSEEEEEEEESCSSCCS---SSCSCHHHHHHTTC
T ss_pred CCccCCHHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEcCccccc---cCCCcccHHHHHcC
Confidence 477899999999999999998742 3567899999999999210 01267899998863
No 34
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=96.94 E-value=0.00049 Score=58.39 Aligned_cols=65 Identities=18% Similarity=0.126 Sum_probs=51.5
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccce
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRM 86 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i 86 (162)
.|-||-+||+++||+++.|+. ..++.++.++|.+-|| -|+.|++..+.... .
T Consensus 179 ~~lDnr~g~~~~l~~l~~l~~----~~~~~~v~~~ft~qEE--------vG~~Ga~~a~~~~~----------------p 230 (355)
T 3kl9_A 179 KAWDNRYGVLMVSELAEALSG----QKLGNELYLGSNVQEE--------VGLRGAHTSTTKFD----------------P 230 (355)
T ss_dssp SCHHHHHHHHHHHHHHHHHSS----CCCSSEEEEEEESCCT--------TTSHHHHHHHHHHC----------------C
T ss_pred eccccHHHHHHHHHHHHHhhh----cCCCceEEEEEECccc--------cCcchhHHHHhccC----------------C
Confidence 688999999999999999875 4578899999999999 78888876664431 2
Q ss_pred eeEEEeccCCCCC
Q psy571 87 DMLVLLDLLGTSN 99 (162)
Q Consensus 87 ~~~i~lDmvG~~~ 99 (162)
+.+|.+|+..+.+
T Consensus 231 d~~i~~D~~~a~d 243 (355)
T 3kl9_A 231 EVFLAVDCSPAGD 243 (355)
T ss_dssp SEEEEEEEEECCG
T ss_pred CEEEEecCccCCC
Confidence 4479999875544
No 35
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=96.84 E-value=0.0026 Score=55.07 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=49.6
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccc
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 85 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~ 85 (162)
.|+.|+=.|+|++|..++.|...- ..+. +|.|+|-.+|| .+..|++++++...+ .+++
T Consensus 126 rG~~D~K~~~a~~l~a~~~l~~~~--~~~~-~v~~~~~~~EE--------~g~~g~~~~~~~~~~-----------~~~~ 183 (472)
T 3pfe_A 126 RGGADDGYSAYASLTAIRALEQQG--LPYP-RCILIIEACEE--------SGSYDLPFYIELLKE-----------RIGK 183 (472)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHTT--CCCE-EEEEEEESCGG--------GTSTTHHHHHHHHHH-----------HHCC
T ss_pred eCcccCcHHHHHHHHHHHHHHHcC--CCCC-cEEEEEEeCCC--------CCChhHHHHHHHhHh-----------hccC
Confidence 488899999999999999998631 2344 89999999999 556799999865421 1334
Q ss_pred eeeEEEec
Q psy571 86 MDMLVLLD 93 (162)
Q Consensus 86 i~~~i~lD 93 (162)
+++++.+|
T Consensus 184 ~d~~~~~~ 191 (472)
T 3pfe_A 184 PSLVICLD 191 (472)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEeC
Confidence 66666666
No 36
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=96.83 E-value=0.004 Score=51.30 Aligned_cols=54 Identities=20% Similarity=0.169 Sum_probs=43.4
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCC-ccchHHHHHHHHh
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDS-IWGARHLAAKWER 70 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~-l~GS~~~a~~~~~ 70 (162)
|+.|+-.|+|++|..++.|.... .+++.+|.|+|..+|| .+ ..||+++++.+..
T Consensus 97 G~~D~k~g~~~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~~~~~G~~~~~~~~~~ 151 (377)
T 3isz_A 97 GAADMKGSLAAMIVAAEEYVKAN--PNHKGTIALLITSDEE--------ATAKDGTIHVVETLMA 151 (377)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCSS--------SCCSSSHHHHHHHHHH
T ss_pred ChhhhhHHHHHHHHHHHHHHHhC--CCCCceEEEEEEcccc--------cCccccHHHHHHHHHh
Confidence 77799999999999998887641 3467899999999999 33 4699999876543
No 37
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=96.70 E-value=0.0019 Score=53.61 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=42.3
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCc--cchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI--WGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l--~GS~~~a~~ 67 (162)
.|+.|+-+|+|++|++++.|... ..++.+|.|+|..+|| .+. .|++++++.
T Consensus 99 ~G~~D~K~~~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE--------~g~~~~G~~~~~~~ 151 (369)
T 3tx8_A 99 CGTVDMKSGLAVYLHTFATLATS---TELKHDLTLIAYECEE--------VADHLNGLGHIRDE 151 (369)
T ss_dssp SSTTTTHHHHHHHHHHHHHHTSC---TTCCSEEEEEEECCCS--------SCTTSCHHHHHHHH
T ss_pred CCcccchHHHHHHHHHHHHHHhh---cCCCccEEEEEEeccc--------cCcccccHHHHHHh
Confidence 48889999999999999999752 3567899999999999 443 688888865
No 38
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=96.67 E-value=0.001 Score=55.30 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=38.7
Q ss_pred CCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHH
Q psy571 9 TDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 65 (162)
Q Consensus 9 ~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a 65 (162)
.|+..|+|++|++++.|... ..++.+|.|+|+.+|| .+..||+++.
T Consensus 107 ~D~k~g~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE--------~g~~Ga~~~~ 152 (373)
T 3gb0_A 107 ADDKAGLASMFEAIRVLKEK---NIPHGTIEFIITVGEE--------SGLVGAKALD 152 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TCCCCCEEEEEESCGG--------GTSHHHHHSC
T ss_pred cccHHHHHHHHHHHHHHHhc---CCCCCCEEEEEEeccc--------cCchhhhhhC
Confidence 38889999999999999874 3356889999999999 5678998774
No 39
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=96.57 E-value=0.003 Score=55.08 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=44.6
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKW 68 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~ 68 (162)
.|+.|+-.|+|++|..++.|...- .+++.+|.|+|..+|| .+..|++++.+..
T Consensus 134 rG~~D~Kg~~a~~l~a~~~l~~~~--~~~~~~i~~~~~~~EE--------~g~~g~~~~~~~~ 186 (492)
T 3khx_A 134 RGTLDDKGPTIAAYYAIKILEDMN--VDWKKRIHMIIGTDEE--------SDWKCTDRYFKTE 186 (492)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEECCTT--------CCCCTTSHHHHHS
T ss_pred cCCccCcHHHHHHHHHHHHHHHcC--CCCCCCEEEEEECCcc--------CCCcCHHHHHHhC
Confidence 389999999999999999998731 2567899999999999 5667999998763
No 40
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=96.54 E-value=0.0033 Score=52.35 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=38.3
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCC-CccchHHHHHH
Q psy571 6 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAED-SIWGARHLAAK 67 (162)
Q Consensus 6 ~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~-~l~GS~~~a~~ 67 (162)
.|+.|+-.|+|++|+.++. ++.+|.|+|..+|| . ++.|++++++.
T Consensus 102 rG~~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE--------~~g~~G~~~~~~~ 147 (369)
T 2f7v_A 102 LGVCDIKGAAAALVAAANA---------GDGDAAFLFSSDEE--------ANDPRCIAAFLAR 147 (369)
T ss_dssp TTTTTTHHHHHHHHHHHTT---------CCCCEEEEEESCTT--------SSSCCHHHHHHTT
T ss_pred cccccccHHHHHHHHHHhc---------CCCCEEEEEEeCcc--------cCCCcCHHHHHhc
Confidence 4789999999999999876 24689999999999 5 77899988853
No 41
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=96.48 E-value=0.0017 Score=54.71 Aligned_cols=45 Identities=20% Similarity=0.363 Sum_probs=38.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHH
Q psy571 10 DSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 65 (162)
Q Consensus 10 DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a 65 (162)
|+.+|||++|++++.|... ..++.+|.|+|+.+|| .++.|++++.
T Consensus 129 D~k~g~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE--------~g~~Ga~~~~ 173 (396)
T 3rza_A 129 DDKAGLAAMLEVLQVIKEQ---QIPHGQIQFVITVGEE--------SGLIGAKELN 173 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TCCCCCEEEEEESCGG--------GTSHHHHHCC
T ss_pred ccHHHHHHHHHHHHHHHhc---CCCCCCEEEEEEcccc--------cccHhHhhhc
Confidence 8889999999999999874 3356899999999999 5678998764
No 42
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=96.42 E-value=0.0032 Score=54.51 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=42.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHH
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 66 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~ 66 (162)
|.-|+..|+|++|++++.|...- .+++.+|.|+|+.+||.-. -..++.||++++.
T Consensus 121 g~~D~k~gvaa~L~a~~~L~~~~--~~~~~~v~lif~~dEE~~~---~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 121 GKYDGILGVLAGLEVLRTFKDNN--YVPNYDVCVVVWFNAEGAR---FARSCTGSSVWSH 175 (474)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHT--CCCSSCEEEEECTTCSCSS---SSCTTHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHHHHHcC--CCCCCCEEEEEECCccCCC---CCCCcccHHHHHh
Confidence 44599999999999999998741 3457899999999999200 0026789999975
No 43
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=96.37 E-value=0.0051 Score=52.20 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 13 VPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 13 sg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
.|+|++|++++.|.... .+++.+|.|+|..+|| +..|++++++.
T Consensus 120 ~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE---------g~~G~~~~~~~ 163 (418)
T 1xmb_A 120 GHVTMLLGAAKILHEHR--HHLQGTVVLIFQPAEE---------GLSGAKKMREE 163 (418)
T ss_dssp HHHHHHHHHHHHHHHTG--GGCSSEEEEEEECCTT---------TTCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcc--ccCCceEEEEEecccc---------ccccHHHHHHc
Confidence 69999999999998741 2467899999999999 34799988853
No 44
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=96.31 E-value=0.0016 Score=55.62 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=39.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHH
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 65 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a 65 (162)
|+.|+-.|+|++|++++.|...- ..++.+|.|+|..+|| .+ .|++++.
T Consensus 163 ~~~D~K~gva~~l~a~~~L~~~~--~~~~~~i~~if~~~EE--------~g-~Ga~~~~ 210 (434)
T 3ife_A 163 LGADDKAGLTEIMVAMNYLIHNP--QIKHGKIRVAFTPDEE--------IG-RGPAHFD 210 (434)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCT--TSCBCCEEEEEESCGG--------GT-CTGGGCC
T ss_pred hhhhhHHHHHHHHHHHHHHHhCC--CCCCCCEEEEEECCcc--------cC-hHHHHhh
Confidence 46899999999999999998631 2467899999999999 45 6888763
No 45
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=96.12 E-value=0.015 Score=48.98 Aligned_cols=44 Identities=25% Similarity=0.212 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 13 VPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 13 sg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
.|+|++|++++.|.... .+++.+|.|+|..+|| . ..|++++++.
T Consensus 126 g~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE--------~-~~G~~~~~~~ 169 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRR--AELKGTVRFIFQPAEE--------I-AAGARKVLEA 169 (404)
T ss_dssp HHHHHHHHHHHHHHTCG--GGCSSEEEEEEESCTT--------T-TCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcc--ccCCceEEEEEecccc--------c-chhHHHHHhc
Confidence 68999999999998731 3467899999999999 3 4799988853
No 46
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=96.10 E-value=0.002 Score=54.43 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=37.7
Q ss_pred CCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHH
Q psy571 9 TDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 65 (162)
Q Consensus 9 ~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a 65 (162)
.|+-.|||++|++++.|... ..++.+|.|+|..+|| .| .|+++++
T Consensus 139 ~D~K~g~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE--------~g-~Ga~~~~ 183 (417)
T 1fno_A 139 ADDKAGVAEIMTALAVLKGN---PIPHGDIKVAFTPDEE--------VG-KGAKHFD 183 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHSS---SCCCCCEEEEEESCGG--------GT-CTTTTCC
T ss_pred cccHHhHHHHHHHHHHHHhC---CCCCCcEEEEEEeccc--------cC-CChhhhc
Confidence 78889999999999999873 2356799999999999 45 6888776
No 47
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=95.85 E-value=0.0098 Score=48.98 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=39.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHH
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 66 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~ 66 (162)
+.|+-+|||++|++++.+.. ..++..+.++|+.+|| .|+.|++..+.
T Consensus 167 ~~D~k~g~aa~l~al~~l~~----~~~~~~~~~~~t~~EE--------vG~~Ga~~~~~ 213 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHD----AELPAEVWLVASSSEE--------VGLRGGQTATR 213 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTT----CCCSSEEEEEEESCCT--------TSSHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhhh----cCCCceEEEEEEcccc--------cchhHHHHhhc
Confidence 57888999999999999865 3456789999999999 78889887653
No 48
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=95.42 E-value=0.031 Score=47.94 Aligned_cols=44 Identities=32% Similarity=0.304 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHH
Q psy571 13 VPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 67 (162)
Q Consensus 13 sg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~ 67 (162)
.++|++|.+|+.|.... .+++.+|.|+|..+|| . ..|++++++.
T Consensus 153 ~~~a~~l~aa~~L~~~~--~~~~g~v~l~f~p~EE--------~-~~Ga~~~i~~ 196 (445)
T 3io1_A 153 GHTAIGLGLAHVLKQYA--AQLNGVIKLIFQPAEE--------G-TRGARAMVAA 196 (445)
T ss_dssp THHHHHHHHHHHHHHTG--GGCCSEEEEEEESCTT--------T-TCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCc--CcCCceEEEEEecccc--------c-cchHHHHHHc
Confidence 46999999999998742 3567899999999999 2 3699988753
No 49
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=95.09 E-value=0.0089 Score=51.69 Aligned_cols=46 Identities=24% Similarity=0.208 Sum_probs=37.2
Q ss_pred CCC---CCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHH
Q psy571 7 GAT---DSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 66 (162)
Q Consensus 7 GA~---DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~ 66 (162)
|++ |+..|||++|++++.. ..++.+|.|+|+.+|| .++.|++++++
T Consensus 110 G~~lgaD~k~g~a~~l~a~~~~------~~~~~~v~~~~~~~EE--------~g~~Ga~~~~~ 158 (487)
T 2qyv_A 110 GTTLGADNGIGMASALAVLESN------DIAHPELEVLLTMTEE--------RGMEGAIGLRP 158 (487)
T ss_dssp TBCCCHHHHHHHHHHHHHHHCS------SSCCSSEEEEEESCTT--------TTCHHHHTCCS
T ss_pred CCCcCCcCHHHHHHHHHHHHhC------CCCCCCEEEEEEeccc--------cCCHHHHHHHH
Confidence 665 8999999999998631 2356789999999999 67789987764
No 50
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=94.82 E-value=0.01 Score=51.71 Aligned_cols=46 Identities=24% Similarity=0.254 Sum_probs=35.8
Q ss_pred CCC---CCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHH
Q psy571 7 GAT---DSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 66 (162)
Q Consensus 7 GA~---DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~ 66 (162)
|++ |+.+|+|++|.+++ .. ..+..+|.|+|..+|| .++.|++++.+
T Consensus 113 G~~lgaD~k~g~a~~l~~l~---~~---~~~~~~v~~~~~~~EE--------~g~~Ga~~~~~ 161 (490)
T 3mru_A 113 GTTLGADNGIGMASCLAVLA---SK---EIKHGPIEVLLTIDEE--------AGMTGAFGLEA 161 (490)
T ss_dssp TBCCCHHHHTTHHHHHHHHH---CS---SCCCCSEEEEEESCSS--------STTGGGGTCCS
T ss_pred CCccCCCCHHHHHHHHHHHH---hC---CCCCCCEEEEEEcccc--------cccHhHHHhhh
Confidence 666 88999999998752 21 3456789999999999 67789987763
No 51
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=94.76 E-value=0.027 Score=47.66 Aligned_cols=63 Identities=14% Similarity=0.104 Sum_probs=47.6
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccce
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRM 86 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i 86 (162)
.|-||=+||+++||+++.|+ .++.++.++|.+-|| -|+-|++..+..+. .
T Consensus 182 ~~lDnr~g~~~~l~~l~~l~------~~~~~v~~~ft~qEE--------VG~~ga~~aa~~i~----------------p 231 (354)
T 2vpu_A 182 PYLDDRICLYAMIEAARQLG------DHEADIYIVGSVQEE--------VGLRGARVASYAIN----------------P 231 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHCC------CCSSEEEEEECSCCT--------TTSHHHHHHHHHHC----------------C
T ss_pred ecCccHHHHHHHHHHHHHhh------cCCCeEEEEEECCcc--------cCccchhhhhcccC----------------C
Confidence 67899999999999998774 267899999999999 78778775553321 2
Q ss_pred eeEEEeccCCCCC
Q psy571 87 DMLVLLDLLGTSN 99 (162)
Q Consensus 87 ~~~i~lDmvG~~~ 99 (162)
+.+|.+|+.-+.+
T Consensus 232 d~~i~~Dv~~a~d 244 (354)
T 2vpu_A 232 EVGIAMDVTFAKQ 244 (354)
T ss_dssp SEEEEEEEEECCC
T ss_pred CEEEEecccccCC
Confidence 4578888864433
No 52
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=94.45 E-value=0.042 Score=46.29 Aligned_cols=43 Identities=12% Similarity=-0.072 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCC-ccchH-HHHHH
Q psy571 15 CAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDS-IWGAR-HLAAK 67 (162)
Q Consensus 15 ~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~-l~GS~-~~a~~ 67 (162)
+|++|..|+.|.... ..++.+|.|+|+.+|| .+ ..||+ ++++.
T Consensus 99 ~a~~l~aa~~L~~~~--~~~~g~v~~~f~~~EE--------~~~~~Ga~~~~~~~ 143 (394)
T 3ram_A 99 GTASVLGAIGLKQVI--DQIGGKVVVLGCPAEE--------GGENGSAKASYVKA 143 (394)
T ss_dssp HHHHHHHHHHHHTTH--HHHCSEEEEEECCCTT--------CCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhH--hhCCceEEEEEECCcc--------CCCCCchHHHHHHc
Confidence 577888899887632 2457889999999999 45 58999 77754
No 53
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=94.20 E-value=0.017 Score=47.67 Aligned_cols=45 Identities=20% Similarity=0.366 Sum_probs=37.1
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHH
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHL 64 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~ 64 (162)
+.||-+|||++|++++.|.. ..++..+.++|++.|| .|+.|++..
T Consensus 170 ~~D~r~g~aa~l~al~~l~~----~~~~~~~~~~~t~~EE--------vG~~Ga~~~ 214 (346)
T 1vho_A 170 ALDNRASCGVLVKVLEFLKR----YDHPWDVYVVFSVQEE--------TGCLGALTG 214 (346)
T ss_dssp THHHHHHHHHHHHHHHHHTT----CCCSSEEEEEEECTTS--------SSHHHHHHT
T ss_pred cCccHHHHHHHHHHHHHhhh----cCCCceEEEEEECCcc--------cchhhHHHH
Confidence 57899999999999999865 3355689999999999 677787754
No 54
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=93.37 E-value=0.051 Score=44.76 Aligned_cols=60 Identities=15% Similarity=-0.014 Sum_probs=43.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCccccccccee
Q psy571 8 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 87 (162)
Q Consensus 8 A~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i~ 87 (162)
+.||-+|||++|++++.+ + . |.++|++.|| -|+.|++..+....+. . +.+
T Consensus 163 ~~D~k~G~aa~l~al~~l------~---~-i~~~~t~~EE--------vG~~Ga~~a~~~~~~~-~-----------~~~ 212 (321)
T 3cpx_A 163 YLDDRLGVWTALELAKTL------E---H-GIIAFTCWEE--------HGGGSVAYLARWIYET-F-----------HVK 212 (321)
T ss_dssp THHHHHHHHHHHHHTTTC------C---S-EEEEEESSTT--------TTCCSHHHHHHHHHHH-H-----------CCC
T ss_pred CCcCHHHHHHHHHHHHHh------c---C-cEEEEECCcc--------Cchhcchhhhhccccc-c-----------CCC
Confidence 679999999999998865 2 1 8899999999 7888998755321111 1 235
Q ss_pred eEEEeccCCC
Q psy571 88 MLVLLDLLGT 97 (162)
Q Consensus 88 ~~i~lDmvG~ 97 (162)
++|.+|+-..
T Consensus 213 ~~i~~D~~~~ 222 (321)
T 3cpx_A 213 QSLICDITWV 222 (321)
T ss_dssp EEEECCCEEC
T ss_pred EEEEEeCccc
Confidence 6777777543
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=90.35 E-value=0.083 Score=44.52 Aligned_cols=61 Identities=20% Similarity=0.288 Sum_probs=44.5
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccccccce
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRM 86 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~l~~i 86 (162)
.|-||=+||+++||+++.++ . +.++.++|.+-|| -|+-|++..+.. . ..
T Consensus 177 ~~lDdR~g~~~~l~~l~~l~------~-~~~~~~~ft~qEE--------VG~~Ga~~aa~~-----i-----------~p 225 (343)
T 3isx_A 177 KAMDDRIGCAVIVEVFKRIK------P-AVTLYGVFSVQEE--------VGLVGASVAGYG-----V-----------PA 225 (343)
T ss_dssp SCHHHHHHHHHHHHHHHHCC------C-SSEEEEEEECCCC--------TTSCCSTTTGGG-----C-----------CC
T ss_pred ccCccHHHHHHHHHHHHhcc------C-CCeEEEEEECCcc--------cCchhHHHHhhc-----C-----------CC
Confidence 57799999999999988763 2 5789999999999 777787633311 1 12
Q ss_pred eeEEEeccCCCC
Q psy571 87 DMLVLLDLLGTS 98 (162)
Q Consensus 87 ~~~i~lDmvG~~ 98 (162)
+.+|.+|+.-+.
T Consensus 226 d~~i~vDv~~a~ 237 (343)
T 3isx_A 226 DEAIAIDVTDSA 237 (343)
T ss_dssp SEEEEEEEEECC
T ss_pred CEEEEEeCcCCC
Confidence 457889986443
No 56
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=80.82 E-value=0.86 Score=39.44 Aligned_cols=74 Identities=19% Similarity=0.181 Sum_probs=48.0
Q ss_pred Ccc--CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCccccccCCCCCccchHHHHHHHHhcccccCCcccc
Q psy571 4 PFI--GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLT 81 (162)
Q Consensus 4 ~f~--GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE~~~~w~~~~~l~GS~~~a~~~~~~~~~~~~~~~~ 81 (162)
.|+ .+-||=++|+++|+..+.++ +.+..|.++| |-|| -|+-|++--+..+. | .
T Consensus 227 ~~I~s~~lDdr~~~~~~l~al~~~~------~~~~~v~~~f-d~EE--------VGs~ga~gA~s~~~----~------~ 281 (428)
T 2ijz_A 227 EFIAGARLDNLLSCHAGLEALLNAE------GDENCILVCT-DHEE--------VGSCSHCGADGPFL----E------Q 281 (428)
T ss_dssp SSSSCCCSSCSSTTTTTTTHHHHTT------SCSSSCEEEE-CBSC--------TTTTCHHHHSSCCT----T------T
T ss_pred CeEEeecCccHHHHHHHHHHHHhcc------cCCceEEEEE-eccc--------cCccchhhhhcccc----H------H
Confidence 455 78899999999999987663 2446775544 9999 66667653332111 1 1
Q ss_pred cccce-------------eeEEEeccCCCCCCcc
Q psy571 82 KLDRM-------------DMLVLLDLLGTSNPRF 102 (162)
Q Consensus 82 ~l~~i-------------~~~i~lDmvG~~~~~~ 102 (162)
-+.+| ..+|.+|+.-+.+|.+
T Consensus 282 ~l~ri~~~~~~~~~~~~~s~~is~Dv~ha~~Pn~ 315 (428)
T 2ijz_A 282 VLRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNY 315 (428)
T ss_dssp SCCSSSSSSSSSTTTTTSCCEEEECCCCCCCSSC
T ss_pred HHHHhhhhhhHHHhhhhcCEEEEEecccccCCCC
Confidence 23333 7889999977644543
No 57
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=79.54 E-value=0.41 Score=41.82 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=28.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
++-||=++|.++|+..+.+ . ++..+.+++||-||
T Consensus 246 ~~lDnr~~~~~~l~al~~~-~------~~~~~~~~~~d~EE 279 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-N------PEKSIGVIFFDKEE 279 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-C------CSSCEEEEEESCGG
T ss_pred ecchhhHHHHHHHHHHHhc-C------CCceEEEEEEcccc
Confidence 7788889999999997765 2 35689999999999
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=78.54 E-value=0.27 Score=43.04 Aligned_cols=36 Identities=17% Similarity=-0.030 Sum_probs=29.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
++-||=++|+++|+..+.+. ..++..+.++|||-||
T Consensus 252 ~~lDdr~~~~~~l~al~~~~-----~~~~~~~~~~~~d~EE 287 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLE-----ETPNKTAICFLVDKEE 287 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSS-----CCCSSCEECCCBCSTT
T ss_pred ecCccHHHHHHHHHHHHhhh-----ccCCceEEEEEEcccc
Confidence 67788899999999977553 1456789999999999
No 59
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=73.54 E-value=0.71 Score=40.94 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=28.2
Q ss_pred CCCCCchHHHHHHHHHHHHHHH---hhccCCCcceEEEEecCCc
Q psy571 7 GATDSAVPCAMLLYIARLMRQE---LSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~---~~~~~~~~~i~fvffdgEE 47 (162)
++-||=+||.++||..+.+... +. ..+...+ +++||-||
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~-~~~~~~v-~v~~dqEE 323 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLA-ADPHVRM-IALYDNEE 323 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHH-HCCSEEE-EEEESCGG
T ss_pred eccccHHHHHHHHHHHHhhhccccccc-cCCCcEE-EEEEccCC
Confidence 6778999999999988776421 00 1234555 99999999
No 60
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=72.86 E-value=1.4 Score=38.55 Aligned_cols=35 Identities=20% Similarity=0.078 Sum_probs=29.6
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 7 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 7 GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
++-||=++|+++|+..+.+. .++..+.++|||-||
T Consensus 258 ~~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EE 292 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEE 292 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGG
T ss_pred ecchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCC
Confidence 67788899999999977552 356789999999999
No 61
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=28.42 E-value=59 Score=23.57 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=27.7
Q ss_pred CccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 4 PFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 4 ~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
|..|.+|. ..+|-||...++.. |+.=|++|.||.--
T Consensus 72 PmFg~td~---~~Vl~El~~C~k~~-----P~~YVRligfDn~~ 107 (128)
T 1wdd_S 72 PMFGCTDA---TQVLKELEEAKKAY-----PDAFVRIIGFDNVR 107 (128)
T ss_dssp CCTTCCCH---HHHHHHHHHHHHHC-----TTSEEEEEEEETTT
T ss_pred cCccCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCCC
Confidence 56778776 67888888888763 66789999998654
No 62
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=27.66 E-value=64 Score=22.67 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=27.6
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCC
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGE 46 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgE 46 (162)
-|..|.+|. .++|-||...++.. |+.=|++|.||.-
T Consensus 59 lPmf~~~d~---~~Vl~Ele~C~k~~-----p~~yVRligfD~~ 94 (109)
T 1rbl_M 59 LPLFACAAP---QQVLDEVRECRSEY-----GDCYIRVAGFDNI 94 (109)
T ss_dssp SCCTTCCCH---HHHHHHHHHHHHHC-----TTSEEEEEEEETT
T ss_pred cCCcCCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCC
Confidence 356777776 68888998888763 6677999999853
No 63
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=27.59 E-value=63 Score=23.05 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=28.0
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
-+..|.+|. .++|-||...++.. |+.=|++|.||.--
T Consensus 58 lPmf~~~d~---~~Vl~Ele~C~k~~-----p~~yVRliGfD~~~ 94 (118)
T 3zxw_B 58 LPLFNCTNA---QDVLNEVQQCRSEY-----PNCFIRVVAFDNIK 94 (118)
T ss_dssp SCCTTCCCH---HHHHHHHHHHHHHC-----TTSEEEEEEEETTT
T ss_pred cCCcCCCCH---HHHHHHHHHHHHHC-----CCceEEEEEEeCCc
Confidence 356777775 67888888888763 66789999998654
No 64
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=27.22 E-value=66 Score=22.62 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=27.5
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCC
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGE 46 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgE 46 (162)
-|..|.+|. .++|-||...++.. |+.=|++|.||.-
T Consensus 61 lPmf~~~d~---~~Vl~El~~C~k~~-----p~~yVRligfD~~ 96 (110)
T 1svd_M 61 LPFFGEQNV---DNVLAEIEACRSAY-----PTHQVKLVAYDNY 96 (110)
T ss_dssp CCCTTCCCH---HHHHHHHHHHHHHS-----TTSEEEEEEEETT
T ss_pred cCCcCCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCC
Confidence 356777775 78888998888763 6677999999853
No 65
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=25.72 E-value=69 Score=23.56 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=27.9
Q ss_pred CccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 4 PFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 4 ~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
|..|.+|. ..+|-||...++.. |+.=|++|.||.--
T Consensus 79 PmFg~td~---~qVl~El~~C~k~~-----P~~YVRligfDn~~ 114 (140)
T 1gk8_I 79 PMFGCRDP---MQVLREIVACTKAF-----PDAYVRLVAFDNQK 114 (140)
T ss_dssp CCTTCCCH---HHHHHHHHHHHHHC-----TTSEEEEEEEETTT
T ss_pred CCcCCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCCC
Confidence 56777775 67888998888763 66789999998654
No 66
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=23.36 E-value=83 Score=23.05 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=27.6
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
-|..|.+|. .++|.||...++.. |+.=|++|.||.--
T Consensus 53 LPmF~~td~---~~Vl~Ele~C~k~~-----p~~YVRliGfD~~~ 89 (138)
T 1bwv_S 53 LPLFDVTDP---AAVLFEINACRKAR-----SNFYIKVVGFSSVR 89 (138)
T ss_dssp SCBCSCCCH---HHHHHHHHHHHHHC-----TTSEEEEEEEECCT
T ss_pred CCCcCCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCCC
Confidence 356777776 68888998888763 66679999997543
No 67
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=23.24 E-value=88 Score=22.94 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=28.1
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
-|..|.+|. .++|.||...++.. |+.=|++|.||.--
T Consensus 53 LPmF~~td~---~~Vl~Ele~C~k~~-----p~~YVRliGfD~~~ 89 (139)
T 1bxn_I 53 LPMFDLRDA---AGILMEINNARNTF-----PNHYIRVTAFDSTH 89 (139)
T ss_dssp SCBTTCCCH---HHHHHHHHHHHHHC-----SSSEEEEEEECTTT
T ss_pred CCCcCCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCCC
Confidence 356777776 68888998888763 66789999997544
No 68
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=20.34 E-value=1.3e+02 Score=22.07 Aligned_cols=37 Identities=22% Similarity=0.376 Sum_probs=28.1
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHHHhhccCCCcceEEEEecCCc
Q psy571 3 SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 47 (162)
Q Consensus 3 ~~f~GA~DnAsg~A~lLeiAr~l~~~~~~~~~~~~i~fvffdgEE 47 (162)
-|..|.+|. ..+|.||....+.. |+.=|++|.||.--
T Consensus 53 LPmFg~~d~---~~Vl~Ele~C~k~~-----p~~YVRliGfDn~~ 89 (138)
T 4f0h_B 53 LPLFEVTDP---APVLFEINACRKAK-----SNFYIKVVGFSSER 89 (138)
T ss_dssp CCBCSCCSH---HHHHHHHHHHHHHT-----TTSEEEEEEEECCT
T ss_pred CCCcCCCCH---HHHHHHHHHHHHHC-----CCCeEEEEEEeCCC
Confidence 467777775 67888888888763 66779999998653
Done!