BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5712
(386 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His
341 Replaced By Cys
pdb|2PO7|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With His
341 Replaced By Cys
Length = 359
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 163/297 (54%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ D+D++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDQDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAP-----------------------GTAERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++ IETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDCIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound
pdb|2QD2|B Chain B, F110a Variant Of Human Ferrochelatase With Protoheme Bound
pdb|3HCP|A Chain A, Human Ferrochelatase With Mn And Deuteroporphyrin Bound
pdb|3HCP|B Chain B, Human Ferrochelatase With Mn And Deuteroporphyrin Bound
Length = 359
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 164/297 (55%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPAIAKRRTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAPGT-----------------------AERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium
Sulfate
pdb|2QD3|B Chain B, Wild Type Human Ferrochelatase Crystallized With Ammonium
Sulfate
pdb|2QD4|A Chain A, Wild Type Human Ferrochelatase Crystallized With Mncl2
pdb|2QD4|B Chain B, Wild Type Human Ferrochelatase Crystallized With Mncl2
pdb|2QD5|A Chain A, Structure Of Wild Type Human Ferrochelatase In Complex
With A Lead- Porphyrin Compound
pdb|2QD5|B Chain B, Structure Of Wild Type Human Ferrochelatase In Complex
With A Lead- Porphyrin Compound
pdb|3HCN|A Chain A, Hg And Protoporphyrin Bound Human Ferrochelatase
pdb|3HCN|B Chain B, Hg And Protoporphyrin Bound Human Ferrochelatase
pdb|3HCO|A Chain A, Human Ferrochelatase With Cd And Protoporphyrin Ix Bound
pdb|3HCO|B Chain B, Human Ferrochelatase With Cd And Protoporphyrin Ix Bound
pdb|3HCR|A Chain A, Human Ferrochelatase With Deuteroporphyrin And Ni Bound
pdb|3HCR|B Chain B, Human Ferrochelatase With Deuteroporphyrin And Ni Bound
Length = 359
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 164/297 (55%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAPGT-----------------------AERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase
pdb|1HRK|B Chain B, Crystal Structure Of Human Ferrochelatase
pdb|2HRC|A Chain A, 1.7 Angstrom Structure Of Human Ferrochelatase Variant
R115l
pdb|2HRC|B Chain B, 1.7 Angstrom Structure Of Human Ferrochelatase Variant
R115l
Length = 359
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 164/297 (55%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAPGT-----------------------AERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase
pdb|3AQI|B Chain B, H240a Variant Of Human Ferrochelatase
Length = 359
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 164/297 (55%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAP-----------------------GTAERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADAILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADAILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|B Chain B, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|C Chain C, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|D Chain D, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2QD1|A Chain A, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|B Chain B, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|C Chain C, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|D Chain D, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
Length = 359
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 164/297 (55%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAPGT-----------------------AERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++HI+TL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIEYSQVLAKECGV 298
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe
337 Replaced By Ala
pdb|2PNJ|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With Phe
337 Replaced By Ala
Length = 359
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 163/297 (54%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAPGT-----------------------AERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIA ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAATSDHIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase
pdb|4F4D|B Chain B, F337r Variant Of Human Ferrochelatase
Length = 359
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 163/297 (54%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAPGT-----------------------AERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIA ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIARTSDHIETLYELDIEYSQVLAKECGV 298
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSAHSLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His
263 Replaced By Cys
pdb|2PO5|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With His
263 Replaced By Cys
Length = 359
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 163/297 (54%), Gaps = 59/297 (19%)
Query: 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSL----------HCQEKNAR 81
KPKT ILMLNMGGP V ++L R+ DRD++ LP L QE+ R
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 82 ----------STKEIPGNRRWVSDIEVDSAP-----------------------GTAERV 108
++K+ G + + ++ ++AP ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERA 121
Query: 109 VVI--FSQVSSVKLGSPSN--------------ISWSLIDRWSTHPLLCKVFAERIQEEL 152
+ + Q S GS N + WS IDRW TH LL + FA+ I +EL
Sbjct: 122 IAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKEL 181
Query: 153 KQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212
FP E + +V+ILFSA SLP+ VNRGDPYP EV ATVQ VM+ L CNPY LVWQSKV
Sbjct: 182 DHFPLEKRSEVVILFSACSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKV 241
Query: 213 GPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSV 269
GP+PWLGP TD+++KG ++G+KN LLVPIAF ++HIETL+E+DIEY L KE V
Sbjct: 242 GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGV 298
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 14/212 (6%)
Query: 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGK 234
R + G P +G+++ L+ +P + +G ++ P T++A++ + G
Sbjct: 60 RRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDG- 117
Query: 235 KNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWST 294
L IAF + C G ++ Y + G + WS IDRW T
Sbjct: 118 ---LERAIAFT--------QYPQYSCSTTGSSLNAIYRY-YNQVGRKPTMKWSTIDRWPT 165
Query: 295 HPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQ 354
H LL + FA+ I +EL FP E + +V+ILFSA SLP+ VNRGDPYP EV ATVQ VM+
Sbjct: 166 HHLLIQCFADHILKELDHFPLEKRSEVVILFSACSLPMSVVNRGDPYPQEVSATVQKVME 225
Query: 355 ELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG 386
L CNPY LVWQSKVGP+PWLGP TD+++KG
Sbjct: 226 RLEYCNPYRLVWQSKVGPMPWLGPQTDESIKG 257
>pdb|1L8X|A Chain A, Crystal Structure Of Ferrochelatase From The Yeast,
Saccharomyces Cerevisiae, With Cobalt(Ii) As The
Substrate Ion
pdb|1L8X|B Chain B, Crystal Structure Of Ferrochelatase From The Yeast,
Saccharomyces Cerevisiae, With Cobalt(Ii) As The
Substrate Ion
pdb|1LBQ|A Chain A, The Crystal Structure Of Saccharomyces Cerevisiae
Ferrochelatase
pdb|1LBQ|B Chain B, The Crystal Structure Of Saccharomyces Cerevisiae
Ferrochelatase
Length = 362
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 146/284 (51%), Gaps = 62/284 (21%)
Query: 35 TAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSLHCQE--------KNARSTKEI 86
T I+++NMGGP+ ++ ++L+++ D D+I + + + K + +EI
Sbjct: 8 TGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREI 67
Query: 87 PGN---RRW-------VSDIEVDSAPGTAE--------------------------RVVV 110
G R+W V I + P TA + V
Sbjct: 68 GGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAV 127
Query: 111 IFSQV---------SSVK--------LGSPSNISWSLIDRWSTHPLLCKVFAERIQEELK 153
FSQ SS+ L S +ISWS+IDRW T+ L K F+E I ++L+
Sbjct: 128 AFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENITKKLQ 187
Query: 154 QFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG 213
+FP V+ V++LFSAHSLP+ VN GD YP+EV ATV +MQ+L NPY LVWQS+VG
Sbjct: 188 EFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLVWQSQVG 247
Query: 214 PLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDI 257
P PWLG T + + ++ + +PIAF ++HIETLHE+D+
Sbjct: 248 PKPWLGAQTAE-IAEFLGPKVDGLMFIPIAFTSDHIETLHEIDL 290
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 74/101 (73%)
Query: 280 SPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGD 339
S +ISWS+IDRW T+ L K F+E I ++L++FP V+ V++LFSAHSLP+ VN GD
Sbjct: 156 SERSISWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGD 215
Query: 340 PYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFT 380
YP+EV ATV +MQ+L NPY LVWQS+VGP PWLG T
Sbjct: 216 AYPAEVAATVYNIMQKLKFKNPYRLVWQSQVGPKPWLGAQT 256
>pdb|2H1V|A Chain A, Crystal Structure Of The Lys87ala Mutant Variant Of
Bacillus Subtilis Ferrochelatase
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 135 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE 191
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 192 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 250
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 251 FVYVPVGFVADHLEVLYDNDYE 272
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 69 QHLNEIQD-EITFKAYIG-LAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 126
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 127 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 168
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SAHSLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 169 PEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 227
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 228 DPWLGPDVQD 237
>pdb|1C1H|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In
Complex With N-Methyl Mesoporphyrin
pdb|1LD3|A Chain A, Crystal Structure Of B. Subilis Ferrochelatase With Zn(2+)
Bound At The Active Site.
pdb|1N0I|A Chain A, Crystal Structure Of Ferrochelatase With Cadmium Bound At
Active Site
pdb|2HK6|A Chain A, Crystal Structure Of B. Subtilis Ferrochelatase With Iron
Bound At The Active Site
pdb|1AK1|A Chain A, Ferrochelatase From Bacillus Subtilis
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 135 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE 191
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 192 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 250
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 251 FVYVPVGFVADHLEVLYDNDYE 272
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 69 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 126
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 127 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 168
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SAHSLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 169 PEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 227
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 228 DPWLGPDVQD 237
>pdb|3GOQ|A Chain A, Crystal Structure Of The Tyr13met Variant Of Bacillus
Subtilis Ferrochelatase
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 135 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE 191
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 192 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 250
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 251 FVYVPVGFVADHLEVLYDNDYE 272
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 69 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 126
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 127 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 168
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SAHSLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 169 PEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 227
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 228 DPWLGPDVQD 237
>pdb|2AC2|A Chain A, Crystal Structure Of The Tyr13phe Mutant Variant Of
Bacillus Subtilis Ferrochelatase With Zn(2+) Bound At
The Active Site
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 134 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE 190
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 191 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 249
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 250 FVYVPVGFVADHLEVLYDNDYE 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 68 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 125
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 126 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 167
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SAHSLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 168 PEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 226
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 227 DPWLGPDVQD 236
>pdb|1DOZ|A Chain A, Crystal Structure Of Ferrochelatase
pdb|2Q2N|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In
Complex With Deuteroporphyrin Ix 2,4-Disulfonic Acid
Dihydrochloride
pdb|3M4Z|A Chain A, Crystal Structure Of B. Subtilis Ferrochelatase With
Cobalt Bound At The Active Site
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 134 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE 190
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 191 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 249
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 250 FVYVPVGFVADHLEVLYDNDYE 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 68 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 125
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 126 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 167
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SAHSLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 168 PEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 226
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 227 DPWLGPDVQD 236
>pdb|1C9E|A Chain A, Structure Of Ferrochelatase With Copper(Ii) N-
Methylmesoporphyrin Complex Bound At The Active Site
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 131 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE 187
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 188 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 246
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 247 FVYVPVGFVADHLEVLYDNDYE 268
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 65 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 122
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 123 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 164
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SAHSLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 165 PEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 223
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 224 DPWLGPDVQD 233
>pdb|2Q3J|A Chain A, Crystal Structure Of The His183ala Variant Of Bacillus
Subtilis Ferrochelatase In Complex With N-Methyl
Mesoporphyrin
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SA SLP +
Sbjct: 134 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAASLPEKIKE 190
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 191 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 249
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 250 FVYVPVGFVADHLEVLYDNDYE 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 68 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 125
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 126 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 167
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SA SLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 168 PEDERENAMLIVSAASLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 226
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 227 DPWLGPDVQD 236
>pdb|2H1W|A Chain A, Crystal Structure Of The His183ala Mutant Variant Of
Bacillus Subtilis Ferrochelatase
Length = 310
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SA SLP +
Sbjct: 135 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAASLPEKIKE 191
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 192 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 250
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 251 FVYVPVGFVADHLEVLYDNDYE 272
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 69 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 126
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 127 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 168
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SA SLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 169 PEDERENAMLIVSAASLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 227
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 228 DPWLGPDVQD 237
>pdb|2AC4|A Chain A, Crystal Structure Of The His183cys Mutant Variant Of
Bacillus Subtilis Ferrochelatase
pdb|2Q2O|A Chain A, Crystal Structure Of H183c Bacillus Subtilis
Ferrochelatase In Complex With Deuteroporphyrin Ix
2,4-Disulfonic Acid Dihydrochloride
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 119 KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN 178
KLG ++ + ++ W P + +R++E P + +++ +++ SA SLP +
Sbjct: 134 KLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSACSLPEKIKE 190
Query: 179 RGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGYVKQ-GKKN 236
GDPYP ++ + + ++ E + Y + WQS+ P PWLGP D + +Q G +
Sbjct: 191 FGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA 249
Query: 237 FLLVPIAFVNEHIETLHEMDIE 258
F+ VP+ FV +H+E L++ D E
Sbjct: 250 FVYVPVGFVADHLEVLYDNDYE 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 196 QELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA--FVNEHIETLH 253
Q LN + +++ +G L + PF +DA+ K G + + +A F +++ +
Sbjct: 68 QHLNEIQD-EITFKAYIG-LKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 125
Query: 254 EMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313
+ E LG ++ + ++ W P + +R++E
Sbjct: 126 KRAKEEAEKLG------------------GLTITSVESWYDEPKFVTYWVDRVKETYASM 167
Query: 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-P 372
P + +++ +++ SA SLP + GDPYP ++ + + ++ E + Y + WQS+ P
Sbjct: 168 PEDERENAMLIVSACSLPEKIKEFGDPYPDQLHESAK-LIAEGAGVSEYAVGWQSEGNTP 226
Query: 373 LPWLGPFTDD 382
PWLGP D
Sbjct: 227 DPWLGPDVQD 236
>pdb|2C8J|A Chain A, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus
Anthracis, Str. Ames
pdb|2C8J|B Chain B, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus
Anthracis, Str. Ames
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 113 SQVSSVKLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSL 172
+Q + KLG N++ ID W P + + + ++ ++ +++ SAHSL
Sbjct: 128 AQEEAEKLG---NLTIHGIDSWYKEPKFIQYWVDAVKSIYSGMSDAEREKAVLIVSAHSL 184
Query: 173 PLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG-PLPWLGPFTDDALKGY-V 230
P + + GDPYP ++ T + + N Y + WQS P PW+GP D +
Sbjct: 185 PEKIIAMGDPYPDQLNETADYIARGAEVAN-YAVGWQSAGNTPDPWIGPDVQDLTRELNE 243
Query: 231 KQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVS 268
K G +F+ P+ FV EH+E L++ D E C + E+
Sbjct: 244 KYGYTSFVYAPVGFVAEHLEVLYDNDFE-CKVVTDEIG 280
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 33/203 (16%)
Query: 186 EVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFV 245
E ++ + E+ + YH+ L + PF +DA+K G ++ IA V
Sbjct: 61 EQAKKLEKRLNEVQDEVEYHMYLG-----LKHIEPFIEDAVKEMHNDGIQD----AIALV 111
Query: 246 NEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSP-----SNISWSLIDRWSTHPLLCK 300
L S FS+ + G N++ ID W P +
Sbjct: 112 -----------------LAPHYSTFSVKSYVGRAQEEAEKLGNLTIHGIDSWYKEPKFIQ 154
Query: 301 VFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCN 360
+ + ++ ++ +++ SAHSLP + + GDPYP ++ T + + N
Sbjct: 155 YWVDAVKSIYSGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPDQLNETADYIARGAEVAN 214
Query: 361 PYHLVWQSKVG-PLPWLGPFTDD 382
Y + WQS P PW+GP D
Sbjct: 215 -YAVGWQSAGNTPDPWIGPDVQD 236
>pdb|4EO2|A Chain A, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EO2|B Chain B, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EO2|C Chain C, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EO2|D Chain D, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EO2|E Chain E, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EO2|F Chain F, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|A Chain A, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|B Chain B, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|C Chain C, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|D Chain D, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|E Chain E, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|F Chain F, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|G Chain G, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|H Chain H, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|I Chain I, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|J Chain J, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|K Chain K, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
pdb|4EP0|L Chain L, Structure Of The Bacteriophage C1 Tail Knob Protein, Gp12
Length = 583
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Query: 183 YPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY--VKQGKKNFLLV 240
+PS G+T G+ NPY + W + L + D L GY ++Q KN ++
Sbjct: 193 FPSSSGSTHDGIY------NPYDMYWFNDYESLKEVM----DYLTGYPWIQQSIKNVTII 242
Query: 241 PIAFVNEHIETLHE 254
P F+ + HE
Sbjct: 243 PSGFIKQESLNDHE 256
>pdb|3SIS|A Chain A, Crystal Structure Of Porcine Crw-8 Rotavirus Vp8 In
Complex With Aceramido-Gm3_gc
pdb|3SIS|B Chain B, Crystal Structure Of Porcine Crw-8 Rotavirus Vp8 In
Complex With Aceramido-Gm3_gc
pdb|3SIT|A Chain A, Crystal Structure Of Porcine Crw-8 Rotavirus Vp8 In
Complex With Aceramido-Gm3
pdb|3SIT|B Chain B, Crystal Structure Of Porcine Crw-8 Rotavirus Vp8 In
Complex With Aceramido-Gm3
Length = 163
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 91 RWVSDIEVDSAPGTAERVVVIFSQVSSVKLGSPSNISWSLIDRWSTHP 138
RW++ I ++ T R+ +F Q ++ + + S W ID T P
Sbjct: 40 RWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFIDVSKTTP 87
>pdb|2I2S|A Chain A, Crystal Structure Of The Porcine Crw-8 Rotavirus Vp8
Carbohydrate- Recognising Domain
pdb|2I2S|B Chain B, Crystal Structure Of The Porcine Crw-8 Rotavirus Vp8
Carbohydrate- Recognising Domain
pdb|3TAY|A Chain A, Crystal Structure Of Porcine Rotavirus Crw-8 Vp8 In
Complex With N- Glycolylneuraminic Acid
pdb|3TAY|B Chain B, Crystal Structure Of Porcine Rotavirus Crw-8 Vp8 In
Complex With N- Glycolylneuraminic Acid
Length = 163
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 91 RWVSDIEVDSAPGTAERVVVIFSQVSSVKLGSPSNISWSLIDRWSTHP 138
RW++ I ++ T R+ +F Q ++ + + S W ID T P
Sbjct: 40 RWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFIDVSKTTP 87
>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
Thaliana
pdb|2WU9|B Chain B, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
Thaliana
Length = 442
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 162 DVIILFSAHSLPLRAVNRG---DPYPSEVGATVQGVMQELNNCNPYHL 206
D +++ +AH PL RG D YP ++ A V + E N NP +
Sbjct: 30 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEV 77
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 320 DVIILFSAHSLPLRAVNRG---DPYPSEVGATVQGVMQELNNCNPYHL 364
D +++ +AH PL RG D YP ++ A V + E N NP +
Sbjct: 30 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEV 77
>pdb|2C7Y|A Chain A, Plant Enzyme
pdb|2C7Y|B Chain B, Plant Enzyme
pdb|2C7Z|A Chain A, Plant Enzyme Crystal Form Ii
Length = 404
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 162 DVIILFSAHSLPLRAVNRG---DPYPSEVGATVQGVMQELNNCNPYHL 206
D +++ +AH PL RG D YP ++ A V + E N NP +
Sbjct: 13 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEV 60
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 320 DVIILFSAHSLPLRAVNRG---DPYPSEVGATVQGVMQELNNCNPYHL 364
D +++ +AH PL RG D YP ++ A V + E N NP +
Sbjct: 13 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEV 60
>pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From
Sunflower
pdb|2WUA|B Chain B, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From
Sunflower
Length = 440
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 162 DVIILFSAHSLPLRAVNRG---DPYPSEVGATVQGVMQELNNCNPYHL 206
D +++ +A+ PL RG D YP ++ A V + E N NP +
Sbjct: 33 DDVVIVAAYRSPLCKAKRGGLKDTYPDDILAPVLKALIEKTNINPAEV 80
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 320 DVIILFSAHSLPLRAVNRG---DPYPSEVGATVQGVMQELNNCNPYHL 364
D +++ +A+ PL RG D YP ++ A V + E N NP +
Sbjct: 33 DDVVIVAAYRSPLCKAKRGGLKDTYPDDILAPVLKALIEKTNINPAEV 80
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,735,060
Number of Sequences: 62578
Number of extensions: 535042
Number of successful extensions: 1117
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1033
Number of HSP's gapped (non-prelim): 59
length of query: 386
length of database: 14,973,337
effective HSP length: 101
effective length of query: 285
effective length of database: 8,652,959
effective search space: 2466093315
effective search space used: 2466093315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)