Query psy5712
Match_columns 386
No_of_seqs 260 out of 2128
Neff 7.5
Searched_HMMs 29240
Date Sat Aug 17 00:43:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 2.7E-58 9.2E-63 452.0 28.8 266 32-312 2-327 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 2.9E-55 9.9E-60 432.0 23.3 263 31-312 4-328 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 2E-49 6.7E-54 384.5 21.7 255 32-311 3-309 (310)
4 3hcn_A Ferrochelatase, mitocho 100.0 3.3E-40 1.1E-44 323.7 22.9 187 185-385 70-256 (359)
5 1lbq_A Ferrochelatase; rossman 100.0 4.1E-38 1.4E-42 309.9 22.4 187 185-385 75-261 (362)
6 2h1v_A Ferrochelatase; rossman 100.0 2.6E-35 8.8E-40 285.4 21.4 205 162-385 5-240 (310)
7 2xvy_A Chelatase, putative; me 99.9 1.8E-23 6.3E-28 198.2 16.8 238 32-312 7-267 (269)
8 2xwp_A Sirohydrochlorin cobalt 99.8 9.5E-19 3.2E-23 165.5 14.3 233 33-311 1-257 (264)
9 2jh3_A Ribosomal protein S2-re 99.8 4E-18 1.4E-22 172.8 14.4 173 104-312 63-267 (474)
10 2xvy_A Chelatase, putative; me 99.7 3E-16 1E-20 148.5 15.9 178 162-385 9-194 (269)
11 2jh3_A Ribosomal protein S2-re 99.6 6.3E-15 2.1E-19 149.4 13.1 181 163-385 4-200 (474)
12 2xwp_A Sirohydrochlorin cobalt 99.3 1.4E-11 4.8E-16 116.2 10.9 173 163-385 3-185 (264)
13 3lyh_A Cobalamin (vitamin B12) 99.0 7.9E-09 2.7E-13 86.2 14.1 118 162-312 5-123 (126)
14 2xws_A Sirohydrochlorin cobalt 98.8 5.8E-08 2E-12 81.4 12.4 124 163-312 4-128 (133)
15 1tjn_A Sirohydrochlorin cobalt 98.8 5.2E-08 1.8E-12 84.5 12.4 123 163-312 25-149 (156)
16 3lyh_A Cobalamin (vitamin B12) 97.8 1.7E-05 5.7E-10 65.8 5.2 102 31-154 2-123 (126)
17 2xws_A Sirohydrochlorin cobalt 97.7 5.6E-05 1.9E-09 62.9 5.9 50 104-154 59-128 (133)
18 1tjn_A Sirohydrochlorin cobalt 97.5 9E-05 3.1E-09 63.9 5.7 50 104-154 80-149 (156)
19 3si9_A DHDPS, dihydrodipicolin 50.3 61 0.0021 30.3 8.9 74 184-270 74-150 (315)
20 3flu_A DHDPS, dihydrodipicolin 50.1 58 0.002 30.1 8.6 74 184-270 59-135 (297)
21 2ojp_A DHDPS, dihydrodipicolin 49.2 81 0.0028 29.0 9.4 74 184-270 53-129 (292)
22 3na8_A Putative dihydrodipicol 49.1 62 0.0021 30.2 8.7 74 184-270 76-152 (315)
23 3qze_A DHDPS, dihydrodipicolin 47.8 68 0.0023 29.9 8.7 74 184-270 75-151 (314)
24 3m5v_A DHDPS, dihydrodipicolin 45.8 69 0.0024 29.6 8.4 74 184-270 59-136 (301)
25 3daq_A DHDPS, dihydrodipicolin 45.7 63 0.0022 29.7 8.1 74 184-270 54-130 (292)
26 1o5k_A DHDPS, dihydrodipicolin 43.8 79 0.0027 29.3 8.5 74 184-270 64-140 (306)
27 3tak_A DHDPS, dihydrodipicolin 42.9 75 0.0026 29.2 8.1 74 184-270 53-129 (291)
28 2v9d_A YAGE; dihydrodipicolini 42.6 78 0.0027 29.9 8.4 74 184-270 83-159 (343)
29 1xky_A Dihydrodipicolinate syn 42.5 96 0.0033 28.6 8.9 74 184-270 64-140 (301)
30 2ehh_A DHDPS, dihydrodipicolin 42.5 83 0.0028 28.9 8.4 74 184-270 52-128 (294)
31 3l21_A DHDPS, dihydrodipicolin 42.1 78 0.0027 29.3 8.1 74 184-270 67-143 (304)
32 2yxg_A DHDPS, dihydrodipicolin 41.0 78 0.0027 29.0 7.9 74 184-270 52-128 (289)
33 2r8w_A AGR_C_1641P; APC7498, d 40.9 85 0.0029 29.5 8.3 74 184-270 86-162 (332)
34 3cpr_A Dihydrodipicolinate syn 40.4 93 0.0032 28.8 8.4 74 184-270 68-144 (304)
35 2rfg_A Dihydrodipicolinate syn 40.0 85 0.0029 28.9 8.0 74 184-270 52-128 (297)
36 2vc6_A MOSA, dihydrodipicolina 39.0 1.2E+02 0.0041 27.8 8.9 74 184-270 52-128 (292)
37 3eb2_A Putative dihydrodipicol 38.1 1.4E+02 0.0047 27.5 9.1 76 184-272 56-134 (300)
38 2wkj_A N-acetylneuraminate lya 36.5 94 0.0032 28.7 7.7 72 184-268 63-137 (303)
39 3a5f_A Dihydrodipicolinate syn 35.7 93 0.0032 28.5 7.5 74 184-270 53-129 (291)
40 3fkr_A L-2-keto-3-deoxyarabona 35.6 1.8E+02 0.0061 26.9 9.6 74 184-270 60-139 (309)
41 1f6k_A N-acetylneuraminate lya 34.5 1E+02 0.0035 28.3 7.6 74 184-270 56-132 (293)
42 3s5o_A 4-hydroxy-2-oxoglutarat 33.3 1.3E+02 0.0043 27.9 8.1 74 184-270 66-144 (307)
43 3ha2_A NADPH-quinone reductase 32.1 2.3E+02 0.0078 23.8 9.2 80 104-201 51-135 (177)
44 3dnf_A ISPH, LYTB, 4-hydroxy-3 31.7 10 0.00036 35.5 0.2 61 292-354 40-111 (297)
45 7a3h_A Endoglucanase; hydrolas 31.0 3E+02 0.01 24.8 11.3 97 134-242 72-175 (303)
46 3nco_A Endoglucanase fncel5A; 30.5 2.8E+02 0.0096 25.0 10.0 28 214-242 35-62 (320)
47 3pzt_A Endoglucanase; alpha/be 30.5 3.2E+02 0.011 25.1 11.8 96 133-242 96-199 (327)
48 3b4u_A Dihydrodipicolinate syn 28.8 1.4E+02 0.0047 27.4 7.4 71 184-267 55-129 (294)
49 3h5d_A DHDPS, dihydrodipicolin 28.4 2.1E+02 0.0072 26.4 8.7 74 184-270 59-136 (311)
50 2o1e_A YCDH; alpha-beta protei 28.3 82 0.0028 29.3 5.8 33 326-358 270-302 (312)
51 3d0c_A Dihydrodipicolinate syn 26.7 2.7E+02 0.0092 25.7 9.1 73 184-270 64-139 (314)
52 3hh8_A Metal ABC transporter s 26.7 1.4E+02 0.0046 27.5 7.0 26 131-156 122-147 (294)
53 3qfe_A Putative dihydrodipicol 25.8 2.7E+02 0.0092 25.8 8.9 74 184-270 63-141 (318)
54 3nco_A Endoglucanase fncel5A; 25.7 2.8E+02 0.0094 25.1 9.0 99 133-242 73-178 (320)
55 3szu_A ISPH, 4-hydroxy-3-methy 23.3 28 0.00096 33.0 1.5 35 320-354 78-123 (328)
56 3cx3_A Lipoprotein; zinc-bindi 23.1 4.1E+02 0.014 23.8 11.5 26 131-156 118-143 (284)
57 3gi1_A LBP, laminin-binding pr 22.6 4.3E+02 0.015 23.8 10.5 26 131-156 120-145 (286)
58 1pq4_A Periplasmic binding pro 21.7 3.4E+02 0.011 24.6 8.7 26 131-156 131-156 (291)
59 3e96_A Dihydrodipicolinate syn 20.4 3.4E+02 0.012 25.0 8.5 73 184-270 64-139 (316)
60 3fdj_A DEGV family protein; GU 20.2 4E+02 0.014 24.1 8.7 138 172-340 25-170 (278)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=2.7e-58 Score=452.03 Aligned_cols=266 Identities=48% Similarity=0.839 Sum_probs=235.2
Q ss_pred CCceEEEEEccCCCCChhHHHHHHHHhcCCCCCcCCchhhhhhc------cHHHHHHhcccCCc---ccccc----c---
Q psy5712 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSLHC------QEKNARSTKEIPGN---RRWVS----D--- 95 (386)
Q Consensus 32 ~~k~aiLlvn~GsP~~~~~v~~fL~~~~~d~~vi~~p~~~~l~~------~~~~~~~Y~~igg~---~~~t~----~--- 95 (386)
++|+||||||||||++++||++||++||+|++||++|.+++|++ +++++++|+.|||+ +.+|+ +
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~~~L~~ 81 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVK 81 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccchHHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999998776653 88999999999865 55651 1
Q ss_pred -cc-------------------cc-------ccCCCCCEEEEEEecCccc----------------cc-CCCCCceEEEe
Q psy5712 96 -IE-------------------VD-------SAPGTAERVVVIFSQVSSV----------------KL-GSPSNISWSLI 131 (386)
Q Consensus 96 -~~-------------------~~-------~~~~g~~~~iv~~p~y~~~----------------~~-~~~~~~~~~~i 131 (386)
+. |. +..+|+++ |+++|+||++ .+ ...+.+.+++|
T Consensus 82 ~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~-ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~~~~i 160 (359)
T 3hcn_A 82 LLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER-AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTI 160 (359)
T ss_dssp HHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSE-EEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSEEEEE
T ss_pred HHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCe-EEEEECCccccccchhhHHHHHHHHHHHhccCCCCceEEe
Confidence 10 11 11349999 8888988843 11 23457789999
Q ss_pred ccCCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeee
Q psy5712 132 DRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSK 211 (386)
Q Consensus 132 ~~~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~ 211 (386)
++|++||.||+|++++|+++++.++.+.+++..|||||||+|++++.+||||..||.+++++|+++||...+|.++|||+
T Consensus 161 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~~GDpY~~q~~~t~~lv~e~Lg~~~~~~l~~QSr 240 (359)
T 3hcn_A 161 DRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSK 240 (359)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEECC
T ss_pred CCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcccCCCHHHHHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 99999999999999999999998765445677999999999999999999999999999999999999875799999999
Q ss_pred eccCCCCCccHHHHHHHHHHCCCCEEEEEccccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecC
Q psy5712 212 VGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDR 291 (386)
Q Consensus 212 ~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~ 291 (386)
+|+.+|++|+++++|++|.++|+++|+|+|++|++||+||++|+|+|++++++.+.|++.+.+++|
T Consensus 241 ~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~~~~rip~-------------- 306 (359)
T 3hcn_A 241 VGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAES-------------- 306 (359)
T ss_dssp SCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCCEEEECCC--------------
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCceEEEcCC--------------
Confidence 999999999999999999999999999999999999999999999998778888999988999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc
Q psy5712 292 WSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 292 ~~d~p~fI~ala~~I~~~l~~ 312 (386)
+|++|.||++|+++|.+.++.
T Consensus 307 LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 307 LNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp STTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999976
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=2.9e-55 Score=432.01 Aligned_cols=263 Identities=36% Similarity=0.643 Sum_probs=226.9
Q ss_pred CCCceEEEEEccCCCCChhHHHHHHHHhcCCCCCcCCch--hhhhhc------cHHHHHHhcccCCc---ccccc-----
Q psy5712 31 SKPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPE--AWSLHC------QEKNARSTKEIPGN---RRWVS----- 94 (386)
Q Consensus 31 ~~~k~aiLlvn~GsP~~~~~v~~fL~~~~~d~~vi~~p~--~~~l~~------~~~~~~~Y~~igg~---~~~t~----- 94 (386)
+++|+||||||||||++++||++||++||+|++||++|. +++|+. +++++++|+.|||+ +.+|+
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~~~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q~~~ 83 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATE 83 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHHHHHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHHHHH
Confidence 457899999999999999999999999999999999985 333432 88999999999865 44551
Q ss_pred ---ccc-------------------cc-------ccCCCCCEEEEEEecCccc----------------cc-CCCCCceE
Q psy5712 95 ---DIE-------------------VD-------SAPGTAERVVVIFSQVSSV----------------KL-GSPSNISW 128 (386)
Q Consensus 95 ---~~~-------------------~~-------~~~~g~~~~iv~~p~y~~~----------------~~-~~~~~~~~ 128 (386)
.+. |. +..+|+++ |+++|+||++ .+ ...+.+++
T Consensus 84 L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~-ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i~i 162 (362)
T 1lbq_A 84 VCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKK-AVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISW 162 (362)
T ss_dssp HHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCE-EEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEE
T ss_pred HHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCe-EEEEecchhccccchhHHHHHHHHHHHhcccCCCceE
Confidence 110 11 12459999 8888988843 11 33567888
Q ss_pred EEeccCCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEe
Q psy5712 129 SLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVW 208 (386)
Q Consensus 129 ~~i~~~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~ 208 (386)
++|++|++||.||++++++|+++++.++...++++.|||||||+|.+++.+||||..||.+++++|++++|...+|.++|
T Consensus 163 ~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~~GDpY~~q~~~ta~ll~e~lg~~~~~~~~f 242 (362)
T 1lbq_A 163 SVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLVW 242 (362)
T ss_dssp EEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEE
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCccccccCCCcHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 99999999999999999999999998764334567999999999999999999999999999999999999754699999
Q ss_pred eeeeccCCCCCccHHHHHHHHHHCCCCEEEEEccccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEE
Q psy5712 209 QSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSL 288 (386)
Q Consensus 209 qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 288 (386)
||++|+++|++|+++++|++| ++|+++|+|+|++|++||+||++|+|+|+ ++++.+.|. +.+++|
T Consensus 243 QSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~gFvsD~lETL~eid~e~-~e~~~~~G~--~~~~p~----------- 307 (362)
T 1lbq_A 243 QSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHIETLHEIDLGV-IGESEYKDK--FKRCES----------- 307 (362)
T ss_dssp ECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECTTCSSCCHHHHTCCCCCC-CTTCTTGGG--EEECCC-----------
T ss_pred ECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECCeechhhHhhHHHHHHHH-HHHHHhCCC--EEEcCC-----------
Confidence 999999999999999999999 99999999999999999999999999986 677788884 888888
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 289 IDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 289 I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
+|+||.||++|+++|++.++.
T Consensus 308 ---Ln~~p~fi~~L~~lv~~~l~~ 328 (362)
T 1lbq_A 308 ---LNGNQTFIEGMADLVKSHLQS 328 (362)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999875
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=2e-49 Score=384.49 Aligned_cols=255 Identities=22% Similarity=0.415 Sum_probs=217.0
Q ss_pred CCceEEEEEccCCCCChhHHHHHHHHhcCCCCCcCCchhhhhhccHHHHHHhcccCCc---ccccc--------ccc---
Q psy5712 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPEAWSLHCQEKNARSTKEIPGN---RRWVS--------DIE--- 97 (386)
Q Consensus 32 ~~k~aiLlvn~GsP~~~~~v~~fL~~~~~d~~vi~~p~~~~l~~~~~~~~~Y~~igg~---~~~t~--------~~~--- 97 (386)
++|+||||||||||++++||++||+++|+|+. +|.. . +++++++|+.|||+ +.||+ .+.
T Consensus 3 ~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~---~~~~-r---~~~~~~~Y~~ig~gSPl~~~t~~q~~~L~~~L~~~~ 75 (310)
T 2h1v_A 3 RKKMGLLVMAYGTPYKEEDIERYYTHIRRGRK---PEPE-M---LQDLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQ 75 (310)
T ss_dssp CEEEEEEEEECCCCSSGGGHHHHHHHHTTTCC---CCHH-H---HHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEEeCCCCCChHHHHHHHHHHhcCCC---CChH-H---HHHHHHHHHHCCCCChhHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999999985 3432 2 58999999999875 44551 111
Q ss_pred ---------------cc-------ccCCCCCEEEEEEecCccc------------cc--CCCCCceEEEeccCCCChHHH
Q psy5712 98 ---------------VD-------SAPGTAERVVVIFSQVSSV------------KL--GSPSNISWSLIDRWSTHPLLC 141 (386)
Q Consensus 98 ---------------~~-------~~~~g~~~~iv~~p~y~~~------------~~--~~~~~~~~~~i~~~~~~p~~i 141 (386)
|. +..+||++ |+++|+||.+ .+ ...+.+.++++++|++||.||
T Consensus 76 ~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~-ivvlPl~pq~s~st~g~~~~~i~~~l~~~~~~~i~~i~~~~~~p~~i 154 (310)
T 2h1v_A 76 DEITFKAYIGLAHIEPFIEDAVAEMHKDGITE-AVSIVLAPHFSTFSVQSYNKRAKEEAEKLGGLTITSVESWYDEPKFV 154 (310)
T ss_dssp SSEEEEEEEEESSSSSBHHHHHHHHHHTTCCE-EEEEESSSSCCTTTHHHHHHHHHHHHHHHCSCEEEECCCCTTCHHHH
T ss_pred CCCCceEeehhcCCCCCHHHHHHHHHhcCCCE-EEEEECccchhhhhHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHH
Confidence 11 12349999 9999998732 01 112368999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccCCceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeee-eccCCCCCc
Q psy5712 142 KVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSK-VGPLPWLGP 220 (386)
Q Consensus 142 ~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~-~G~~~w~~P 220 (386)
++++++|+++++.++...+++..||||+||+|.+++.+||||..+|.++++++++++|.. .|.++|||+ +|+.+|++|
T Consensus 155 ~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~~gDpY~~~~~~t~~~l~e~l~~~-~~~~~fqSrg~g~~~Wl~P 233 (310)
T 2h1v_A 155 TYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGVS-EYAVGWQSEGNTPDPWLGP 233 (310)
T ss_dssp HHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGGGTCCHHHHHHHHHHHHHHHHTCS-CEEEEEESCCCCSSCBSSC
T ss_pred HHHHHHHHHHHHhcccccCCCceEEEecCCCchhhccCCCChHHHHHHHHHHHHHHcCCC-CEEEEEEcCCCCCCCcCCC
Confidence 999999999998875322346799999999999999999999999999999999999974 899999996 999999999
Q ss_pred cHHHHHHHHHHC-CCCEEEEEccccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHH
Q psy5712 221 FTDDALKGYVKQ-GKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLC 299 (386)
Q Consensus 221 ~i~d~l~~L~~~-G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI 299 (386)
+++++|++|.++ |+++|+|+|++|++||+||++|+|+++ ++.+.+.|. ++.+++| +|+||.|+
T Consensus 234 ~~~~~l~~l~~~~G~k~v~V~P~~F~sD~lEtl~ei~~e~-~e~~~~~G~-~~~~~p~--------------ln~~p~~i 297 (310)
T 2h1v_A 234 DVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYEC-KVVTDDIGA-SYYRPEM--------------PNAKPEFI 297 (310)
T ss_dssp BHHHHHHHHHHHHCCSEEEEECTTCCSSCHHHHTTTTTHH-HHHHHHHTC-EEECCCC--------------CTTCHHHH
T ss_pred CHHHHHHHHHHHcCCceEEEECCcccccceeeHHHHHHHH-HHHHHHcCC-eEEECCC--------------CCCCHHHH
Confidence 999999999999 999999999999999999999999986 677778884 6888888 99999999
Q ss_pred HHHHHHHHHHHh
Q psy5712 300 KVFAERIQEELK 311 (386)
Q Consensus 300 ~ala~~I~~~l~ 311 (386)
++|+++|++.++
T Consensus 298 ~~l~~~v~~~l~ 309 (310)
T 2h1v_A 298 DALATVVLKKLG 309 (310)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 999999998763
No 4
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=3.3e-40 Score=323.73 Aligned_cols=187 Identities=40% Similarity=0.724 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEEEEEccccccccchhhhhhhHHHHHHHh
Q psy5712 185 SEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLG 264 (386)
Q Consensus 185 ~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~ 264 (386)
....+.+++|.+.|+...+=...+.+.+| |+|++|+++++|++|.++|+++|+++|||+++++++|.+.+|. ..+...
T Consensus 70 ~~t~~Q~~~L~~~L~~~~~~~~~~~V~~a-mry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~-~~~~~~ 147 (359)
T 3hcn_A 70 IWTSKQGEGMVKLLDELSPNTAPHKYYIG-FRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNA-IYRYYN 147 (359)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCSEEEEEE-ESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccccCceEEEE-EeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHH-HHHHHH
Confidence 34444455555555311000012355677 7888999999999999999999999999999999999887762 222222
Q ss_pred ccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhcCCccccCceEEEEeecCCchhhhccCCCCHHH
Q psy5712 265 KEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSE 344 (386)
Q Consensus 265 ~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~~~~~~~~~~~llfSaHslP~~~i~~GDpY~~q 344 (386)
+. . ....+++++|++|++||.||+|++++|++++++++.+.+++++|||||||||++++++||||..|
T Consensus 148 ~~-~-----------~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~~GDpY~~q 215 (359)
T 3hcn_A 148 QV-G-----------RKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQE 215 (359)
T ss_dssp HT-T-----------CCCSSEEEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHTTTCSHHHH
T ss_pred Hh-c-----------cCCCCceEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcccCCCHHHH
Confidence 11 0 01245688999999999999999999999999877544566799999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCchhhhhc
Q psy5712 345 VGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALK 385 (386)
Q Consensus 345 ~~~t~~~l~~~l~~~~~~~lafQSr~G~~~WL~P~t~d~l~ 385 (386)
|++|+++|+++|+..++|.++||||+|+.+||+|+|+|+|+
T Consensus 216 ~~~t~~lv~e~Lg~~~~~~l~~QSr~G~~~WL~P~t~d~l~ 256 (359)
T 3hcn_A 216 VSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIK 256 (359)
T ss_dssp HHHHHHHHHHHTTTCSCEEEEEECCSCSSCBSSSBHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEEEcCCCCCCCCCCCHHHHHH
Confidence 99999999999997557999999999999999999999986
No 5
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=4.1e-38 Score=309.93 Aligned_cols=187 Identities=37% Similarity=0.605 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEEEEEccccccccchhhhhhhHHHHHHHh
Q psy5712 185 SEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLG 264 (386)
Q Consensus 185 ~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~ 264 (386)
....+.+++|.+.|+...+-...+.+.+| |+|++|+++|+|++|.++|+++|+++|||+++++++|.+..+ +..+.+.
T Consensus 75 ~~t~~q~~~L~~~L~~~~~~~~~~~V~~a-mry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~-~i~~~l~ 152 (362)
T 1lbq_A 75 KWSEYQATEVCKILDKTCPETAPHKPYVA-FRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSIN-ELWRQIK 152 (362)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCCEEEEEE-ESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCceEEee-cccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHH-HHHHHHH
Confidence 34444566666666310000012456678 788999999999999999999999999999888888776554 1112222
Q ss_pred ccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhcCCccccCceEEEEeecCCchhhhccCCCCHHH
Q psy5712 265 KEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSE 344 (386)
Q Consensus 265 ~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~~~~~~~~~~~llfSaHslP~~~i~~GDpY~~q 344 (386)
+.+ ....+++++|++|++||.||+|++++|++++++.+...+++++|||||||||++++++||||.+|
T Consensus 153 -~~~-----------~~~~i~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~~GDpY~~q 220 (362)
T 1lbq_A 153 -ALD-----------SERSISWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAE 220 (362)
T ss_dssp -HHC-----------TTCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTCSHHHH
T ss_pred -hcc-----------cCCCceEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCccccccCCCcHHHH
Confidence 111 01346678999999999999999999999998876433456799999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCchhhhhc
Q psy5712 345 VGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALK 385 (386)
Q Consensus 345 ~~~t~~~l~~~l~~~~~~~lafQSr~G~~~WL~P~t~d~l~ 385 (386)
|++|+++|+++|+...+|.++||||+|+.+||+|+|+|+|+
T Consensus 221 ~~~ta~ll~e~lg~~~~~~~~fQSr~G~~~WL~P~t~~~l~ 261 (362)
T 1lbq_A 221 VAATVYNIMQKLKFKNPYRLVWQSQVGPKPWLGAQTAEIAE 261 (362)
T ss_dssp HHHHHHHHHHHTTTCSCEEEEEECCCSSSCBCSCBHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEEECCCCCcccCCCCHHHHHH
Confidence 99999999999996447999999999999999999999986
No 6
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=2.6e-35 Score=285.42 Aligned_cols=205 Identities=21% Similarity=0.431 Sum_probs=157.6
Q ss_pred ceEEEEEecCcc---------hhhhccCCCcHH---------------------HHHHHHHHHHHHhcCCCCceeEeeee
Q psy5712 162 DVIILFSAHSLP---------LRAVNRGDPYPS---------------------EVGATVQGVMQELNNCNPYHLVWQSK 211 (386)
Q Consensus 162 ~~~ll~saHg~P---------~~~v~~Gd~y~~---------------------~~~~~~~~l~~~lg~~~~~~~~~qs~ 211 (386)
.++||++.+|+| ++.+.+|...+. ...+.+++|+++|+...+ ...+.+.
T Consensus 5 ~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~~~~~r~~~~~~~Y~~ig~gSPl~~~t~~q~~~L~~~L~~~~~-~~~~~V~ 83 (310)
T 2h1v_A 5 KMGLLVMAYGTPYKEEDIERYYTHIRRGRKPEPEMLQDLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQD-EITFKAY 83 (310)
T ss_dssp EEEEEEEECCCCSSGGGHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHCS-SEEEEEE
T ss_pred CeEEEEEeCCCCCChHHHHHHHHHHhcCCCCChHHHHHHHHHHHHCCCCChhHHHHHHHHHHHHHHHHhcCC-CCCceEe
Confidence 467888888888 344444433222 223334455555531100 0235567
Q ss_pred eccCCCCCccHHHHHHHHHHCCCCEEEEEccccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecC
Q psy5712 212 VGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDR 291 (386)
Q Consensus 212 ~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~ 291 (386)
+| |+|++|+++++|++|.++|+++|+++|||+++++++|.+..+ +..+.+. +.+ .+++++|++
T Consensus 84 ~a-mry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~-~i~~~l~-~~~--------------~~~i~~i~~ 146 (310)
T 2h1v_A 84 IG-LAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNK-RAKEEAE-KLG--------------GLTITSVES 146 (310)
T ss_dssp EE-ESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHH-HHHHHHH-HHC--------------SCEEEECCC
T ss_pred eh-hcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHH-HHHHHHH-hCC--------------CCeEEEeCC
Confidence 78 788899999999999999999999999998888888776553 1112221 111 245888999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCccccCceEEEEeecCCchhhhccCCCCHHHHHHHHHHHHHHhcCCCCeEEEEeCC-C
Q psy5712 292 WSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSK-V 370 (386)
Q Consensus 292 ~~d~p~fI~ala~~I~~~l~~~~~~~~~~~~llfSaHslP~~~i~~GDpY~~q~~~t~~~l~~~l~~~~~~~lafQSr-~ 370 (386)
|++||.||++++++|+++++..+...+++.+|||||||+|++++++||||..||++|+++|+++++. .+|.++|||| +
T Consensus 147 ~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~~gDpY~~~~~~t~~~l~e~l~~-~~~~~~fqSrg~ 225 (310)
T 2h1v_A 147 WYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGV-SEYAVGWQSEGN 225 (310)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGGGTCCHHHHHHHHHHHHHHHHTC-SCEEEEEESCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhccCCCChHHHHHHHHHHHHHHcCC-CCEEEEEEcCCC
Confidence 9999999999999999999876532234579999999999999999999999999999999999996 6899999997 9
Q ss_pred CCCCCCCCchhhhhc
Q psy5712 371 GPLPWLGPFTDDALK 385 (386)
Q Consensus 371 G~~~WL~P~t~d~l~ 385 (386)
|+.+||+|+|+|+|+
T Consensus 226 g~~~Wl~P~~~~~l~ 240 (310)
T 2h1v_A 226 TPDPWLGPDVQDLTR 240 (310)
T ss_dssp CSSCBSSCBHHHHHH
T ss_pred CCCCcCCCCHHHHHH
Confidence 999999999999985
No 7
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=99.90 E-value=1.8e-23 Score=198.24 Aligned_cols=238 Identities=13% Similarity=0.094 Sum_probs=163.0
Q ss_pred CCceEEEEEccCCCCC-----hhHHHHHHHHhcCCCCCcCCchhhhhhccHHHHHHhcccCCc-ccccccccccccCCCC
Q psy5712 32 KPKTAILMLNMGGPTH-----TDQVSEYLHRIMTDRDMIQLPEAWSLHCQEKNARSTKEIPGN-RRWVSDIEVDSAPGTA 105 (386)
Q Consensus 32 ~~k~aiLlvn~GsP~~-----~~~v~~fL~~~~~d~~vi~~p~~~~l~~~~~~~~~Y~~igg~-~~~t~~~~~~~~~~g~ 105 (386)
.+|+||||++|||.+. .+.+..-|++-+.|.+|.-... ...+.++-++-|-. ..+.+.+. .+...|+
T Consensus 7 ~~~~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~------~~~i~~~l~~~~~~~P~i~~al~-~l~~~G~ 79 (269)
T 2xvy_A 7 AQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYT------AKMIRAKLRAEGIAAPSPAEALA-GMAEEGF 79 (269)
T ss_dssp -CCEEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEES------CHHHHHHHHHTTCCCCCHHHHHH-HHHHTTC
T ss_pred CCCceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehh------hHHHHHHHHHcCCCCCCHHHHHH-HHHHCCC
Confidence 4678999999999882 3455556777776655432111 23333333333211 11222332 2345699
Q ss_pred CEEEEEEecCccc---------c----cC-CCCCceEEEeccCCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecC
Q psy5712 106 ERVVVIFSQVSSV---------K----LG-SPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHS 171 (386)
Q Consensus 106 ~~~iv~~p~y~~~---------~----~~-~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg 171 (386)
++ |+++|+|+.. . .. ...-++++++++|+++|.|+++++++|++++... ..++.+|||++||
T Consensus 80 ~~-ivV~Pl~l~~G~~~~di~~~~~~l~~~~~~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~---~~~~~~lll~~HG 155 (269)
T 2xvy_A 80 TH-VAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPAD---RKPGEPVVFMGHG 155 (269)
T ss_dssp CE-EEEEECCSSSSHHHHHHHHHHHHHTTCTTSCSEEEEECCSSCSHHHHHHHHHHHHHHSCTT---CCTTCCEEEEECC
T ss_pred CE-EEEEeceeeccHhHHHHHHHHHHHHHhhccCCeEEEeCCCCCCHHHHHHHHHHHHHhchhh---ccCCceEEEEECC
Confidence 99 9999998731 1 11 1123789999999999999999999999987531 1134589999999
Q ss_pred cchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEEEEEccc-cccccch
Q psy5712 172 LPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIA-FVNEHIE 250 (386)
Q Consensus 172 ~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~-f~~~~~e 250 (386)
+|. .|+++.. ++++.+.+ ++ ..+| +|.++| .|+++++|++|.++|+++|+|+|++ |.++|++
T Consensus 156 s~~----~~~~~~~---~~a~~l~~-~~-----~~~~---~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~~G~h~~ 218 (269)
T 2xvy_A 156 TPH----PADICYP---GLQYYLWR-LD-----PDLL---VGTVEG-SPSFDNVMAELDVRKAKRVWLMPLMAVAGDHAR 218 (269)
T ss_dssp CSS----GGGGHHH---HHHHHHHT-TC-----TTEE---EEESSS-SSCHHHHHHHHHHHTCSEEEEEEESSSCCHHHH
T ss_pred CCh----hhccHHH---HHHHHHHh-cC-----CCEE---EEEcCC-CCCHHHHHHHHHHCCCCEEEEECCccccccchh
Confidence 995 4554332 34455533 34 2234 676788 8999999999999999999999987 5579988
Q ss_pred --hhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 251 --TLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 251 --T~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
+..+++.+ +++.+.+.|++.+.+++| +|++|.++++++++++++++.
T Consensus 219 ~di~~~~~~~-~~~~~~~~g~~~~~~~~~--------------Lg~~p~~~~~l~~~~~~a~~~ 267 (269)
T 2xvy_A 219 NDMAGDEDDS-WTSQLARRGIEAKPVLHG--------------TAESDAVAAIWLRHLDDALAR 267 (269)
T ss_dssp TTTTCSSTTS-HHHHHHHTTCEEEECCCC--------------GGGCHHHHHHHHHHHHHHHHT
T ss_pred hhcCCCchhH-HHHHHHHcCcEEEEecCC--------------CCCCHHHHHHHHHHHHHHHHh
Confidence 55555544 356666778765445666 999999999999999998854
No 8
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.79 E-value=9.5e-19 Score=165.53 Aligned_cols=233 Identities=14% Similarity=0.148 Sum_probs=148.2
Q ss_pred CceEEEEEccCCCC--Chh----HHHHHHHHhcCCCCCcCCch-hhhhhccHHHHHHhcccCCcccccccccccccCCCC
Q psy5712 33 PKTAILMLNMGGPT--HTD----QVSEYLHRIMTDRDMIQLPE-AWSLHCQEKNARSTKEIPGNRRWVSDIEVDSAPGTA 105 (386)
Q Consensus 33 ~k~aiLlvn~GsP~--~~~----~v~~fL~~~~~d~~vi~~p~-~~~l~~~~~~~~~Y~~igg~~~~t~~~~~~~~~~g~ 105 (386)
+|+|||||+|||.+ +.+ .+..-+++.+.|.+|..... ..+ ..++.++|..-- ....+.+. .+...|+
T Consensus 1 M~~aillv~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i---~~~l~~~~g~~~--psi~~aL~-~l~~~G~ 74 (264)
T 2xwp_A 1 MKKALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMI---IRKLRQRDGIDI--DTPLQALQ-KLAAQGY 74 (264)
T ss_dssp -CEEEEEEECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHH---HHHHHHHHCCCC--CCHHHHHH-HHHHHTC
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHH---HHHHHHhcCCCC--CCHHHHHH-HHHhCCC
Confidence 36899999999988 223 34444666665554422111 111 345555554210 00112222 2345699
Q ss_pred CEEEEEEecCcc--c---------ccCCCCCceEEEeccCCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecCcch
Q psy5712 106 ERVVVIFSQVSS--V---------KLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPL 174 (386)
Q Consensus 106 ~~~iv~~p~y~~--~---------~~~~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~ 174 (386)
++ |+++|+|.. . .+....-..+++.++++.+|.+++++++.|.+.+... .++.+|||++||+|.
T Consensus 75 ~~-vvV~Pl~l~~G~~~~di~~~v~~~~~~~~~i~~~~pl~~~~~~~~~l~~~l~~~~~~~----~~~~~lvl~gHGs~~ 149 (264)
T 2xwp_A 75 QD-VAIQSLHIINGDEYEKIVREVQLLRPLFTRLTLGVPLLSSHNDYVQLMQALRQQMPSL----RQTEKVVFMGHGASH 149 (264)
T ss_dssp CE-EEEEECCSSSSHHHHHHHHHHHHHGGGCSEEEEECCSSCSHHHHHHHHHHHHTTSCCC----CTTEEEEEEECCCSS
T ss_pred CE-EEEEeCcccCcHHHHHHHHHHHHHHhhCCceEEecCCCCCHHHHHHHHHHHHHhcccc----CCCCeEEEEECCCCc
Confidence 99 999999862 1 1111111378889999999999999999987765432 245699999999995
Q ss_pred hhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEEEEEcccc-ccccchhhh
Q psy5712 175 RAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAF-VNEHIETLH 253 (386)
Q Consensus 175 ~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f-~~~~~eT~~ 253 (386)
. +++ ..++++.+.++++ . + +++|.++| .|++++++++|.+.|+++|+|+|+++ .++|+..
T Consensus 150 ~----~~~----~~~~~a~~l~~~~-~-~------v~~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~aG~h~~~-- 210 (264)
T 2xwp_A 150 H----AFA----AYACLDHMMTAQR-F-P------ARVGAVES-YPEVDILIDSLRDEGVTGVHLMPLMLVAGDHAIN-- 210 (264)
T ss_dssp G----GGH----HHHHHHHHHHHTT-C-S------EEEEESSS-SSCHHHHHHHHHHHTCCEEEEEECSSCCCHHHHH--
T ss_pred h----hhH----HHHHHHHHHHhhC-C-C------EEEEEeCC-CCCHHHHHHHHHHCCCCEEEEEeeecccCcchhh--
Confidence 3 322 2334443444444 1 3 34566888 99999999999999999999999874 4577632
Q ss_pred hhhHHH-----HHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHh
Q psy5712 254 EMDIEY-----CHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELK 311 (386)
Q Consensus 254 ~~d~e~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~ 311 (386)
|+.. +++.+.+.|.+... .+++++++|.+++++.++++++++
T Consensus 211 --Di~~~~~d~~~~~~~~~g~~~~~--------------~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 211 --DMASDDGDSWKMRFNAAGIPATP--------------WLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp --HHHSSSTTSHHHHHHHTTCCEEE--------------CCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred --hccccchhHHHHHHHHcCCeEEE--------------eccCCCCCHHHHHHHHHHHHHHHh
Confidence 2221 23444445553222 235599999999999999999885
No 9
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.76 E-value=4e-18 Score=172.77 Aligned_cols=173 Identities=13% Similarity=0.101 Sum_probs=130.2
Q ss_pred CCCEEEEEEecCccc------------ccC------------CCCCceEEEeccCCCChHHHHHHHHHHHHHHHhCCccc
Q psy5712 104 TAERVVVIFSQVSSV------------KLG------------SPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPAEV 159 (386)
Q Consensus 104 g~~~~iv~~p~y~~~------------~~~------------~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~~~~~~ 159 (386)
|+++ |+++|+|++. ... ..+.+.+.++++|+.+|.++++++++|++++.. .. .
T Consensus 63 G~~r-VvVvPLfl~~G~H~~~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~-g~-~ 139 (474)
T 2jh3_A 63 AYSD-VTVVPVFLSEGYVTETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPE-GT-D 139 (474)
T ss_dssp CBSE-EEEEECCSCCSHHHHTHHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCT-TC-C
T ss_pred CcCe-EEEEEEehhccHhHHHHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhh-cc-C
Confidence 9999 9999998732 111 134568999999999999999999999998765 11 2
Q ss_pred CCceEEEEEecCcchhhhccCCC-cHHHHHHHHHHHHHHhcCCCCceeEeeeeecc-----CCCCCccHHHHHHHHHHCC
Q psy5712 160 QKDVIILFSAHSLPLRAVNRGDP-YPSEVGATVQGVMQELNNCNPYHLVWQSKVGP-----LPWLGPFTDDALKGYVKQG 233 (386)
Q Consensus 160 ~~~~~ll~saHg~P~~~v~~Gd~-y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~-----~~w~~P~i~d~l~~L~~~G 233 (386)
+++..|||++ |+ +..++.++++.+++++|.. +|.++|+++ ++ ..|++|++++++++| |
T Consensus 140 ~~~~avvlvg-----------dp~a~~~~~~la~~L~e~lg~~-~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~~L---G 203 (474)
T 2jh3_A 140 PADVTLLLLA-----------ARPGNAALETHAQALRERGQFA-GVEVVLESR-EALTPESHAASAVPLSEWPSRV---E 203 (474)
T ss_dssp GGGCEEEEEE-----------SSTTCHHHHHHHHHHHHHCCSS-EEEEEECCC-C---------CCEEGGGGGGGC---C
T ss_pred cccceEEEec-----------CchHHHHHHHHHHHHHHhcCCC-cEEEEEEeC-CCCCCcccccccCCHHHHHHHc---C
Confidence 2356788876 44 4678999999999999875 799999997 54 457788999999998 9
Q ss_pred CCEEEEEccccccccchhhhhhhHHHHHHHhcc--ccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHh
Q psy5712 234 KKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKE--VSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELK 311 (386)
Q Consensus 234 ~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~ 311 (386)
+++|+|+|+ |.+++.++..+++.+. +..... .|. ++.+ +++++++|.++++++++|++++.
T Consensus 204 ~krVvV~P~-Fl~dG~h~~~DI~~~~-~~~~~~~p~G~-~v~~--------------~~~LG~~p~~~~ll~~rv~eal~ 266 (474)
T 2jh3_A 204 AGQAVLVPF-LTHLGKHAAERLQQAL-AQAAERFPQAP-PLHV--------------GGPVGEHPAVAEVVLALAAEGRE 266 (474)
T ss_dssp SSCEEEEEC-SSCCCHHHHHHHHHHH-HHHHHHCTTCC-CEEE--------------CCCGGGSTTHHHHHHHHHHTTCS
T ss_pred CCeEEEEEe-eccCCcchHHHHHHHH-HHHHHhccCCc-EEEe--------------cCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999996 7889999998886542 222222 233 3444 44599999999999999988764
Q ss_pred c
Q psy5712 312 Q 312 (386)
Q Consensus 312 ~ 312 (386)
.
T Consensus 267 ~ 267 (474)
T 2jh3_A 267 D 267 (474)
T ss_dssp C
T ss_pred c
Confidence 3
No 10
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=99.69 E-value=3e-16 Score=148.49 Aligned_cols=178 Identities=13% Similarity=0.108 Sum_probs=118.8
Q ss_pred ceEEEEEecCcchhhhccCCCc-HHHHHHHHHHHHHHhcCCCCceeEeeeee-----ccCCCCCccHHHHHHHHHHCCCC
Q psy5712 162 DVIILFSAHSLPLRAVNRGDPY-PSEVGATVQGVMQELNNCNPYHLVWQSKV-----GPLPWLGPFTDDALKGYVKQGKK 235 (386)
Q Consensus 162 ~~~ll~saHg~P~~~v~~Gd~y-~~~~~~~~~~l~~~lg~~~~~~~~~qs~~-----G~~~w~~P~i~d~l~~L~~~G~~ 235 (386)
+.+||+.+||+-. +. ...+.+.++.++++++. .++..+|.++. ....|..|+++++|++|.++|++
T Consensus 9 ~~aillv~hGS~~-------~~~~~~~~~~~~~l~~~~~~-~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~ 80 (269)
T 2xvy_A 9 KTGILLVAFGTSV-------EEARPALDKMGDRVRAAHPD-IPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFT 80 (269)
T ss_dssp CEEEEEEECCCCC-------TTTTHHHHHHHHHHHHHCTT-SCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCC
T ss_pred CceEEEEeCCCCc-------HHHHHHHHHHHHHHHHHCCC-CeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCC
Confidence 4589999999962 22 33566666777777653 25666764311 01126799999999999999999
Q ss_pred EEEEEccccccccchhhhhhhHHHHHHH--hccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhcC
Q psy5712 236 NFLLVPIAFVNEHIETLHEMDIEYCHDL--GKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQF 313 (386)
Q Consensus 236 ~IvvlPL~f~~~~~eT~~~~d~e~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~~ 313 (386)
+|+|+|||++..+ ... |+. +.+ ..+.. ....+++++++|++||.|+++++++|++.+...
T Consensus 81 ~ivV~Pl~l~~G~--~~~--di~--~~~~~l~~~~------------~~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~ 142 (269)
T 2xvy_A 81 HVAVQSLHTIPGE--EFH--GLL--ETAHAFQGLP------------KGLTRVSVGLPLIGTTADAEAVAEALVASLPAD 142 (269)
T ss_dssp EEEEEECCSSSSH--HHH--HHH--HHHHHHTTCT------------TSCSEEEEECCSSCSHHHHHHHHHHHHHHSCTT
T ss_pred EEEEEeceeeccH--hHH--HHH--HHHHHHHHhh------------ccCCeEEEeCCCCCCHHHHHHHHHHHHHhchhh
Confidence 9999999865322 222 222 221 11110 012457888889999999999999999987542
Q ss_pred CccccCceEEEEeecCCchhhhccCCCCHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCchhhhhc
Q psy5712 314 PAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALK 385 (386)
Q Consensus 314 ~~~~~~~~~llfSaHslP~~~i~~GDpY~~q~~~t~~~l~~~l~~~~~~~lafQSr~G~~~WL~P~t~d~l~ 385 (386)
. ..+..||||+||+|. .||++.. +++++|.+ ++ ..+|+ |..+| +|+|+|+|+
T Consensus 143 ~---~~~~~lll~~HGs~~----~~~~~~~---~~a~~l~~-~~-----~~~~~---g~~e~-~P~~~~~l~ 194 (269)
T 2xvy_A 143 R---KPGEPVVFMGHGTPH----PADICYP---GLQYYLWR-LD-----PDLLV---GTVEG-SPSFDNVMA 194 (269)
T ss_dssp C---CTTCCEEEEECCCSS----GGGGHHH---HHHHHHHT-TC-----TTEEE---EESSS-SSCHHHHHH
T ss_pred c---cCCceEEEEECCCCh----hhccHHH---HHHHHHHh-cC-----CCEEE---EEcCC-CCCHHHHHH
Confidence 1 134589999999996 5665443 35566643 33 34564 56678 899999875
No 11
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.59 E-value=6.3e-15 Score=149.36 Aligned_cols=181 Identities=10% Similarity=0.055 Sum_probs=118.6
Q ss_pred eEEEEEecCcchhhhccCCCcHH-HHHHHHHHHHHHhcC----CCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEE
Q psy5712 163 VIILFSAHSLPLRAVNRGDPYPS-EVGATVQGVMQELNN----CNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNF 237 (386)
Q Consensus 163 ~~ll~saHg~P~~~v~~Gd~y~~-~~~~~~~~l~~~lg~----~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~I 237 (386)
.+||+++||+|.. +... .+.+.++.+.+..+. ..++.++| ++ ..|+++++|++| |+++|
T Consensus 4 ~alLLVgHGSp~~------~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Af------le-~~PsI~eaL~~L---G~~rV 67 (474)
T 2jh3_A 4 RSLVLIGHGSHHH------GESARATQQVAEALRGRGLAGHLPYDEVLEGY------WQ-QEPGLRQVLRTV---AYSDV 67 (474)
T ss_dssp CEEEEEECCCSSC------THHHHHHHHHHHHHHHHHHTTCCSCSEEEEEE------SS-SSSBTTTGGGGC---CBSEE
T ss_pred ceEEEEeCCCCCC------hhHHHHHHHHHHHHHHhCCccccCCCeEEEEE------cC-CCCCHHHHHHHc---CcCeE
Confidence 4799999999842 2322 333444455444330 11344444 56 499999999999 99999
Q ss_pred EEEccccccccchhhhhhhHHHHHHHhcccc----c-eeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 238 LLVPIAFVNEHIETLHEMDIEYCHDLGKEVS----V-FSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 238 vvlPL~f~~~~~eT~~~~d~e~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
+|+|+|++.. ..+.. |+. ..+..... . ..+... ..+++.++++|++||.++++++++|++.++.
T Consensus 68 vVvPLfl~~G-~H~~~--DIp--~~l~~~~~~~dsw~~~~~~~------p~~~I~~~~pLG~~P~lie~la~rI~eal~~ 136 (474)
T 2jh3_A 68 TVVPVFLSEG-YVTET--VLP--RELGLGHQGPVPTGGVVRVL------GGRRVRYTRPLGAHPGMADAIAAQARDTLPE 136 (474)
T ss_dssp EEEECCSCCS-HHHHT--HHH--HHHTCCCCSCCCTTCEEEEE------TTEEEEECCCGGGSTTHHHHHHHHHHHHSCT
T ss_pred EEEEEehhcc-HhHHH--HHH--HHHHHhhhccccchhhhhhc------CCceEEEeCccCCCHHHHHHHHHHHHHHHhh
Confidence 9999885432 22222 322 12221100 0 001111 2346788999999999999999999999865
Q ss_pred CCccccCceEEEEeecCCchhhhccCCC-CHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCC-----CCCCCCchhhhhc
Q psy5712 313 FPAEVQKDVIILFSAHSLPLRAVNRGDP-YPSEVGATVQGVMQELNNCNPYHLVWQSKVGP-----LPWLGPFTDDALK 385 (386)
Q Consensus 313 ~~~~~~~~~~llfSaHslP~~~i~~GDp-Y~~q~~~t~~~l~~~l~~~~~~~lafQSr~G~-----~~WL~P~t~d~l~ 385 (386)
.. .+.++.|||.+ || |..+|.+++++|+++++. ..+.++|||+ +| .+||+|+++|+|+
T Consensus 137 -g~-~~~~~avvlvg-----------dp~a~~~~~~la~~L~e~lg~-~~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~ 200 (474)
T 2jh3_A 137 -GT-DPADVTLLLLA-----------ARPGNAALETHAQALRERGQF-AGVEVVLESR-EALTPESHAASAVPLSEWPS 200 (474)
T ss_dssp -TC-CGGGCEEEEEE-----------SSTTCHHHHHHHHHHHHHCCS-SEEEEEECCC-C---------CCEEGGGGGG
T ss_pred -cc-CcccceEEEec-----------CchHHHHHHHHHHHHHHhcCC-CcEEEEEEeC-CCCCCcccccccCCHHHHHH
Confidence 21 12355777776 66 578999999999999885 4799999998 55 5699999999985
No 12
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.27 E-value=1.4e-11 Score=116.18 Aligned_cols=173 Identities=11% Similarity=0.056 Sum_probs=108.9
Q ss_pred eEEEEEecCcchhhhccCCCcHH-HHHHHHHHHHHHhcCCCCceeEeeee---------eccCCCCCccHHHHHHHHHHC
Q psy5712 163 VIILFSAHSLPLRAVNRGDPYPS-EVGATVQGVMQELNNCNPYHLVWQSK---------VGPLPWLGPFTDDALKGYVKQ 232 (386)
Q Consensus 163 ~~ll~saHg~P~~~v~~Gd~y~~-~~~~~~~~l~~~lg~~~~~~~~~qs~---------~G~~~w~~P~i~d~l~~L~~~ 232 (386)
.++|+.+||+-... ... .+...++.+++++.. .++..+|-|. .| ...|++.++|++|.++
T Consensus 3 ~aillv~hGSr~~~------~~~~~~~~~~~~v~~~~p~-~~V~~af~s~~i~~~l~~~~g---~~~psi~~aL~~l~~~ 72 (264)
T 2xwp_A 3 KALLVVSFGTSYHD------TCEKNIVACERDLAASCPD-RDLFRAFTSGMIIRKLRQRDG---IDIDTPLQALQKLAAQ 72 (264)
T ss_dssp EEEEEEECCCSCHH------HHHHHHHHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHC---CCCCCHHHHHHHHHHH
T ss_pred ceEEEEECCCCCHH------HHHHHHHHHHHHHHHHCCC-CeEEeehhhHHHHHHHHHhcC---CCCCCHHHHHHHHHhC
Confidence 37999999996211 112 344455566666543 2566777542 12 1379999999999999
Q ss_pred CCCEEEEEccccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 233 GKKNFLLVPIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 233 G~~~IvvlPL~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
|+++|+|+||++.. ..+. .++- +..+..... . .++++.+++..+|.+++++++.|.+.+..
T Consensus 73 G~~~vvV~Pl~l~~-G~~~-~di~-~~v~~~~~~--~--------------~~i~~~~pl~~~~~~~~~l~~~l~~~~~~ 133 (264)
T 2xwp_A 73 GYQDVAIQSLHIIN-GDEY-EKIV-REVQLLRPL--F--------------TRLTLGVPLLSSHNDYVQLMQALRQQMPS 133 (264)
T ss_dssp TCCEEEEEECCSSS-SHHH-HHHH-HHHHHHGGG--C--------------SEEEEECCSSCSHHHHHHHHHHHHTTSCC
T ss_pred CCCEEEEEeCcccC-cHHH-HHHH-HHHHHHHhh--C--------------CceEEecCCCCCHHHHHHHHHHHHHhccc
Confidence 99999999998642 2222 2221 111111111 0 13566777999999999999999887654
Q ss_pred CCccccCceEEEEeecCCchhhhccCCCCHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCchhhhhc
Q psy5712 313 FPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALK 385 (386)
Q Consensus 313 ~~~~~~~~~~llfSaHslP~~~i~~GDpY~~q~~~t~~~l~~~l~~~~~~~lafQSr~G~~~WL~P~t~d~l~ 385 (386)
. +++..|||++||.|.. ++.|. .+.++.+ ++++ . .+ ++|..+| +|+++++|+
T Consensus 134 ~----~~~~~lvl~gHGs~~~----~~~~~---~~~a~~l-~~~~-~-~v------~~g~~e~-~P~~~~~l~ 185 (264)
T 2xwp_A 134 L----RQTEKVVFMGHGASHH----AFAAY---ACLDHMM-TAQR-F-PA------RVGAVES-YPEVDILID 185 (264)
T ss_dssp C----CTTEEEEEEECCCSSG----GGHHH---HHHHHHH-HHTT-C-SE------EEEESSS-SSCHHHHHH
T ss_pred c----CCCCeEEEEECCCCch----hhHHH---HHHHHHH-HhhC-C-CE------EEEEeCC-CCCHHHHHH
Confidence 2 2355899999999965 44332 3333344 3333 1 33 4455668 999999874
No 13
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.00 E-value=7.9e-09 Score=86.25 Aligned_cols=118 Identities=17% Similarity=0.253 Sum_probs=79.7
Q ss_pred ceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEEEEEc
Q psy5712 162 DVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVP 241 (386)
Q Consensus 162 ~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlP 241 (386)
..++|+++||++... ......+.++.+.++. . ++.++| +++..|++++++++|.++|+++|+|+|
T Consensus 5 ~~alllv~HGS~~~~------~~~~~~~l~~~l~~~~--~-~V~~a~------le~~~P~l~~~l~~l~~~G~~~vvvvP 69 (126)
T 3lyh_A 5 PHQIILLAHGSSDAR------WCETFEKLAEPTVESI--E-NAAIAY------MELAEPSLDTIVNRAKGQGVEQFTVVP 69 (126)
T ss_dssp CEEEEEEECCCSCHH------HHHHHHHHHHHHHHHS--T-TCEEEE------SSSSSSBHHHHHHHHHHTTCCEEEEEE
T ss_pred CcEEEEEeCCCCCHH------HHHHHHHHHHHHHhhc--C-CEEEEE------EeCCCCCHHHHHHHHHHcCCCEEEEEe
Confidence 358999999997311 1233445555666654 2 677777 677799999999999999999999999
Q ss_pred ccc-ccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 242 IAF-VNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 242 L~f-~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
+++ .+.|. ..++.-+ ..+..+..|. ++.+.++++++|.+++++++++++++.+
T Consensus 70 lfl~~G~H~--~~Dip~~-~~~~~~~~~~---------------~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 70 LFLAAGRHL--RKDVPAM-IERLEAEHGV---------------TIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp CCSCCCHHH--HHHHHHH-HHHHHHHHTC---------------EEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCchh--hhHHHHH-HHHHHHHhCc---------------eEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 874 33333 2333111 1112111222 2445566999999999999999999864
No 14
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.79 E-value=5.8e-08 Score=81.45 Aligned_cols=124 Identities=8% Similarity=0.026 Sum_probs=77.9
Q ss_pred eEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCC-CCccHHHHHHHHHHCCCCEEEEEc
Q psy5712 163 VIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPW-LGPFTDDALKGYVKQGKKNFLLVP 241 (386)
Q Consensus 163 ~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w-~~P~i~d~l~~L~~~G~~~IvvlP 241 (386)
.+||+++||+.... ....+.+.++.+.++++.. ++.++| ++. ..|+++++|++| |+++|+|+|
T Consensus 4 ~alllv~HGS~~~~------~~~~~~~la~~l~~~~~~~-~V~~a~------le~~~~Psl~~~l~~l---g~~~v~v~P 67 (133)
T 2xws_A 4 RGLVIVGHGSQLNH------YREVMELHRKRIEESGAFD-EVKIAF------AARKRRPMPDEAIREM---NCDIIYVVP 67 (133)
T ss_dssp EEEEEEECSCCCHH------HHHHHHHHHHHHHHHTSSS-EEEEEE------SSTTCSSCHHHHHHHC---CCSEEEEEE
T ss_pred ceEEEEECCCCCHH------HHHHHHHHHHHHHhhCCCC-cEEeee------eecCCCCCHHHHHHHc---CCCEEEEEe
Confidence 47999999997211 1234555566677666532 555666 555 799999999999 999999999
Q ss_pred cccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 242 IAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 242 L~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
++++. ...+..++ . ..+.+...-..+... ....++.+.++++++|.++++++++|+++++.
T Consensus 68 lfl~~-G~h~~~di--~--~~~~~~~~~~s~~~~-----~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 68 LFISY-GLHVTEDL--P--DLLGFPRGRGIKEGE-----FEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp CCSSC-CHHHHTHH--H--HHHTCCCSSSCEEEE-----ETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred eeeCC-CcchHhHH--H--HHHHHhhcccccccc-----CCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 87433 23333332 2 122110000011110 12345778889999999999999999877643
No 15
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.79 E-value=5.2e-08 Score=84.50 Aligned_cols=123 Identities=7% Similarity=-0.023 Sum_probs=80.2
Q ss_pred eEEEEEecCcchhhhccCCCcH-HHHHHHHHHHHHHhcCCCCceeEeeeeeccCCC-CCccHHHHHHHHHHCCCCEEEEE
Q psy5712 163 VIILFSAHSLPLRAVNRGDPYP-SEVGATVQGVMQELNNCNPYHLVWQSKVGPLPW-LGPFTDDALKGYVKQGKKNFLLV 240 (386)
Q Consensus 163 ~~ll~saHg~P~~~v~~Gd~y~-~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w-~~P~i~d~l~~L~~~G~~~Ivvl 240 (386)
.+||+++||++ +|.. ..+.+.++.+.++++.. ++.++| +++ ..|+++++|++| |+++|+|+
T Consensus 25 ~avlLv~HGS~-------~p~~~~~~~~la~~l~~~~~~~-~V~~af------le~~~~Psl~~~l~~l---G~~~VvVv 87 (156)
T 1tjn_A 25 RGLVIVGHGSQ-------LNHYREVMELHRKRIEESGAFD-EVKIAF------AARKRRPMPDEAIREM---NCDIIYVV 87 (156)
T ss_dssp EEEEEEECCTT-------STTHHHHHHHHHHHHHHHTSSS-EEEEEE------CSSSCSSCHHHHHHHC---CCSEEEEE
T ss_pred cCEEEEECCCC-------CHHHHHHHHHHHHHHHhhCCCC-eEEEEE------ecCCCCCCHHHHHHHc---CCCEEEEE
Confidence 58999999997 3333 35566667777776543 566666 676 799999999999 99999999
Q ss_pred ccccccccchhhhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy5712 241 PIAFVNEHIETLHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 312 (386)
Q Consensus 241 PL~f~~~~~eT~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~ 312 (386)
|++++.. ..+.. |+. ..+.+...-..+... ...+++.+.++++++|.++++++++|+++++.
T Consensus 88 PlfL~~G-~h~~~--DIp--~~l~~~~~~~sw~~~-----~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 88 PLFISYG-LHVTE--DLP--DLLGFPRGRGIKEGE-----FEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp ECCSSCS-HHHHT--HHH--HHHTCCCSSSCEEEE-----ETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred echhcCC-chhHh--HHH--HHHHHHHhccccccc-----CCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9884332 22222 322 122211000011110 12356778899999999999999999887654
No 16
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=97.83 E-value=1.7e-05 Score=65.79 Aligned_cols=102 Identities=11% Similarity=0.152 Sum_probs=62.1
Q ss_pred CCCceEEEEEccCCCCC--hh---HHHHHHHHhcCCCCCcCCchhhhhh-ccHHHHHHhcccCCcccccccccccccCCC
Q psy5712 31 SKPKTAILMLNMGGPTH--TD---QVSEYLHRIMTDRDMIQLPEAWSLH-CQEKNARSTKEIPGNRRWVSDIEVDSAPGT 104 (386)
Q Consensus 31 ~~~k~aiLlvn~GsP~~--~~---~v~~fL~~~~~d~~vi~~p~~~~l~-~~~~~~~~Y~~igg~~~~t~~~~~~~~~~g 104 (386)
+..|+|||||+|||++. .+ ++..-|++-+ .+|.- -.++ ..|.+.+..+++ ...|
T Consensus 2 m~~~~alllv~HGS~~~~~~~~~~~l~~~l~~~~--~~V~~----a~le~~~P~l~~~l~~l--------------~~~G 61 (126)
T 3lyh_A 2 MTQPHQIILLAHGSSDARWCETFEKLAEPTVESI--ENAAI----AYMELAEPSLDTIVNRA--------------KGQG 61 (126)
T ss_dssp ---CEEEEEEECCCSCHHHHHHHHHHHHHHHHHS--TTCEE----EESSSSSSBHHHHHHHH--------------HHTT
T ss_pred CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHhhc--CCEEE----EEEeCCCCCHHHHHHHH--------------HHcC
Confidence 34578999999999872 22 3333344333 22210 0011 022233333222 3459
Q ss_pred CCEEEEEEecCc--cc----------cc--CCCCCceEEEeccCCCChHHHHHHHHHHHHHHHh
Q psy5712 105 AERVVVIFSQVS--SV----------KL--GSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 154 (386)
Q Consensus 105 ~~~~iv~~p~y~--~~----------~~--~~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~ 154 (386)
+++ |+++|++. +. .+ ..+ ++++.+.++++.+|.++++++++|++++..
T Consensus 62 ~~~-vvvvPlfl~~G~H~~~Dip~~~~~~~~~~-~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 62 VEQ-FTVVPLFLAAGRHLRKDVPAMIERLEAEH-GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp CCE-EEEEECCSCCCHHHHHHHHHHHHHHHHHH-TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred CCE-EEEEecccCCCchhhhHHHHHHHHHHHHh-CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 999 99999864 21 11 123 678889999999999999999999999864
No 17
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=97.66 E-value=5.6e-05 Score=62.92 Aligned_cols=50 Identities=4% Similarity=0.017 Sum_probs=38.2
Q ss_pred CCCEEEEEEecCccc------------cc--C------CCCCceEEEeccCCCChHHHHHHHHHHHHHHHh
Q psy5712 104 TAERVVVIFSQVSSV------------KL--G------SPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 154 (386)
Q Consensus 104 g~~~~iv~~p~y~~~------------~~--~------~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~ 154 (386)
|+++ |+++|+|... .+ . .++.+.+.+.++++.+|.++++++++|++++..
T Consensus 59 g~~~-v~v~Plfl~~G~h~~~di~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 59 NCDI-IYVVPLFISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp CCSE-EEEEECCSSCCHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred CCCE-EEEEeeeeCCCcchHhHHHHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 8999 9999987521 11 1 245678889999999999999999999876543
No 18
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=97.55 E-value=9e-05 Score=63.88 Aligned_cols=50 Identities=4% Similarity=0.017 Sum_probs=38.6
Q ss_pred CCCEEEEEEecCccc------------cc--C------CCCCceEEEeccCCCChHHHHHHHHHHHHHHHh
Q psy5712 104 TAERVVVIFSQVSSV------------KL--G------SPSNISWSLIDRWSTHPLLCKVFAERIQEELKQ 154 (386)
Q Consensus 104 g~~~~iv~~p~y~~~------------~~--~------~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~ 154 (386)
|+++ |+++|+|... .+ . ..+.+.+.+.++++.+|.++++++++|++++..
T Consensus 80 G~~~-VvVvPlfL~~G~h~~~DIp~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 80 NCDI-IYVVPLFISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp CCSE-EEEEECCSSCSHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred CCCE-EEEEechhcCCchhHhHHHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 8899 9999987621 11 1 245678899999999999999999999887654
No 19
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=50.34 E-value=61 Score=30.30 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..++.++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 74 ~~Er~~v~~~~v~~~~grvpVi----aGvg-----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~----~~f 140 (315)
T 3si9_A 74 HEEHKRIIELCVEQVAKRVPVV----AGAG-----SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLY----THF 140 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBE----EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 4566777777777665432332 1234 6788888864 4567999999998876443333332 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+.+++..+..
T Consensus 141 ~~va~a~~lP 150 (315)
T 3si9_A 141 SSIAKAISIP 150 (315)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHcCCCC
Confidence 6676655554
No 20
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=50.11 E-value=58 Score=30.09 Aligned_cols=74 Identities=18% Similarity=0.145 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 59 ~~Er~~v~~~~~~~~~grvpvi----aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~----~~f 125 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVAKRVPVI----AGTG-----ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIY----QHF 125 (297)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----CcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 4667777777777765432322 2234 6788888874 4567999999998876433323232 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 126 ~~va~a~~lP 135 (297)
T 3flu_A 126 KTIAEATSIP 135 (297)
T ss_dssp HHHHHHCCSC
T ss_pred HHHHHhCCCC
Confidence 6676665554
No 21
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=49.16 E-value=81 Score=28.96 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHH---HCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYV---KQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~---~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++... +.|++-++++|+||..-+-+.++ +++
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pvi----aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~----~~f 119 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADGRIPVI----AGTG-----ANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLY----QHF 119 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EecC-----CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 4566677777776665432322 2234 678899887654 35999999999886433333322 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 120 ~~ia~a~~lP 129 (292)
T 2ojp_A 120 KAIAEHTDLP 129 (292)
T ss_dssp HHHHTTCSSC
T ss_pred HHHHHhcCCC
Confidence 6677665544
No 22
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=49.07 E-value=62 Score=30.23 Aligned_cols=74 Identities=14% Similarity=0.215 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++.. .+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 76 ~~Er~~v~~~~v~~~~grvpVia----Gvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 142 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVAHRVPTIV----SVS-----DLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVF----QHY 142 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEE----ECC-----CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEE----ecC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 46777777777776654323321 234 6778888874 4567999999998876443333332 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 143 ~~va~a~~lP 152 (315)
T 3na8_A 143 RAVGEAIGVP 152 (315)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHhCCCc
Confidence 6676665544
No 23
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=47.76 E-value=68 Score=29.93 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 75 ~~Er~~v~~~~v~~~~grvpVi----aGvg-----~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 141 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVKGRIPVI----AGTG-----ANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMY----QHF 141 (314)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----CcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4566777777777665432322 2234 6778888864 4567999999998875433323332 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+.+++..+..
T Consensus 142 ~~va~a~~lP 151 (314)
T 3qze_A 142 RHIAEAVAIP 151 (314)
T ss_dssp HHHHHHSCSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 24
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=45.79 E-value=69 Score=29.60 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHhcC-CCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHH
Q psy5712 184 PSEVGATVQGVMQELNN-CNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEY 259 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~-~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~ 259 (386)
.+|..+.++.+.+..+. + +.+- ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ ++
T Consensus 59 ~~Er~~v~~~~~~~~~g~r--vpvi--aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~----~~ 125 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCKGTK--VKVL--AGAG-----SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLY----EH 125 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSS--CEEE--EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HH
T ss_pred HHHHHHHHHHHHHHhCCCC--CeEE--EeCC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH----HH
Confidence 45777777777777654 3 2221 2234 6788888864 4557999999998876443333332 44
Q ss_pred HHHHhccccce
Q psy5712 260 CHDLGKEVSVF 270 (386)
Q Consensus 260 ~~~~~~~~g~~ 270 (386)
++++++..+..
T Consensus 126 f~~va~a~~lP 136 (301)
T 3m5v_A 126 YKAIAQSVDIP 136 (301)
T ss_dssp HHHHHHHCSSC
T ss_pred HHHHHHhCCCC
Confidence 56676655544
No 25
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=45.71 E-value=63 Score=29.74 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.+. +++
T Consensus 54 ~~Er~~v~~~~~~~~~grvpvi----aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~----~~f 120 (292)
T 3daq_A 54 TDEKELILKTVIDLVDKRVPVI----AGTG-----TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLV----KHF 120 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----cccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 4666677777777665432322 1234 6788888864 4456999999998875443333232 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+.+++..++.
T Consensus 121 ~~ia~a~~lP 130 (292)
T 3daq_A 121 EAIADAVKLP 130 (292)
T ss_dssp HHHHHHHCSC
T ss_pred HHHHHhCCCC
Confidence 6666655544
No 26
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=43.77 E-value=79 Score=29.28 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 64 ~eEr~~vi~~~~~~~~gr--vpVi--aGvg-----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 130 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDGK--IPVI--VGAG-----TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLY----QHY 130 (306)
T ss_dssp HHHHHHHHHHHHHHHTTS--SCEE--EECC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CeEE--EcCC-----CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777766543 3221 2234 67888888654 446999999999886443333222 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 131 ~~va~a~~lP 140 (306)
T 1o5k_A 131 KYISERTDLG 140 (306)
T ss_dssp HHHHTTCSSC
T ss_pred HHHHHhCCCC
Confidence 6677665544
No 27
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=42.93 E-value=75 Score=29.15 Aligned_cols=74 Identities=18% Similarity=0.169 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+..-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.+. +++
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pvi----aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~----~~f 119 (291)
T 3tak_A 53 MEEHTQVIKEIIRVANKRIPII----AGTG-----ANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLY----QHY 119 (291)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEE----EeCC-----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4677777777777765432322 2234 6778888874 4456999999998875433223222 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 120 ~~ia~a~~lP 129 (291)
T 3tak_A 120 KAIAEAVELP 129 (291)
T ss_dssp HHHHHHCCSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 28
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=42.62 E-value=78 Score=29.95 Aligned_cols=74 Identities=11% Similarity=0.180 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 83 ~eEr~~vi~~~ve~~~gr--vpVi--aGvg-----~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~----~~f 149 (343)
T 2v9d_A 83 AEERKAIARFAIDHVDRR--VPVL--IGTG-----GTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLI----RYF 149 (343)
T ss_dssp HHHHHHHHHHHHHHHTTS--SCEE--EECC-----SSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--EecC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777766543 3221 2234 67889888654 456999999999886433323222 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..++.
T Consensus 150 ~~VA~a~~lP 159 (343)
T 2v9d_A 150 EQVADSVTLP 159 (343)
T ss_dssp HHHHHTCSSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 29
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=42.51 E-value=96 Score=28.62 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 64 ~eEr~~v~~~~~~~~~grvpVi----aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 130 (301)
T 1xky_A 64 SEEKVALYRHVVSVVDKRVPVI----AGTG-----SNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMY----QHF 130 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCceEE----eCCC-----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4566677777777665432322 2234 6778888765 4557999999999876443323222 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 131 ~~va~a~~lP 140 (301)
T 1xky_A 131 KAIAESTPLP 140 (301)
T ss_dssp HHHHHTCSSC
T ss_pred HHHHHhcCCC
Confidence 6676655544
No 30
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=42.49 E-value=83 Score=28.92 Aligned_cols=74 Identities=16% Similarity=0.159 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 52 ~~Er~~v~~~~~~~~~gr--vpvi--aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 118 (294)
T 2ehh_A 52 FEEHEKVIEFAVKRAAGR--IKVI--AGTG-----GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLY----EHF 118 (294)
T ss_dssp HHHHHHHHHHHHHHHTTS--SEEE--EECC-----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--EecC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777666542 3322 2234 67788888644 457999999999886433333222 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 119 ~~va~a~~lP 128 (294)
T 2ehh_A 119 KTVAQEVDIP 128 (294)
T ss_dssp HHHHHHCCSC
T ss_pred HHHHHhcCCC
Confidence 6666655443
No 31
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=42.09 E-value=78 Score=29.34 Aligned_cols=74 Identities=11% Similarity=0.154 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 67 ~~Er~~v~~~~~~~~~gr--vpvi--aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~----~~f 133 (304)
T 3l21_A 67 DGEKIELLRAVLEAVGDR--ARVI--AGAG-----TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQ----AHF 133 (304)
T ss_dssp HHHHHHHHHHHHHHHTTT--SEEE--EECC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CeEE--EeCC-----CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 466777777777776543 3322 2234 6778888864 4456999999998876443333332 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 134 ~~va~a~~lP 143 (304)
T 3l21_A 134 TAVADATELP 143 (304)
T ss_dssp HHHHTSCSSC
T ss_pred HHHHHhcCCC
Confidence 6777665554
No 32
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=40.97 E-value=78 Score=29.01 Aligned_cols=74 Identities=14% Similarity=0.201 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 52 ~~Er~~v~~~~~~~~~gr--~pvi--aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~----~~f 118 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVNGR--VQVI--AGAG-----SNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLR----KHF 118 (289)
T ss_dssp HHHHHHHHHHHHHHHTTS--SEEE--EECC-----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--EeCC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777666542 3322 2234 67888887644 456999999999886433333332 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 119 ~~ia~a~~lP 128 (289)
T 2yxg_A 119 GKVAESINLP 128 (289)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 33
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=40.85 E-value=85 Score=29.50 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 86 ~eEr~~vi~~~ve~~~gr--vpVi--aGvg-----~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~----~~f 152 (332)
T 2r8w_A 86 REERRRAIEAAATILRGR--RTLM--AGIG-----ALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAY----HHF 152 (332)
T ss_dssp HHHHHHHHHHHHHHHTTS--SEEE--EEEC-----CSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--EecC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456677777777766543 3322 2344 67788888643 456999999999886443333332 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..++.
T Consensus 153 ~~VA~a~~lP 162 (332)
T 2r8w_A 153 AAVAGATALP 162 (332)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 34
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=40.42 E-value=93 Score=28.77 Aligned_cols=74 Identities=18% Similarity=0.179 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 68 ~~Er~~v~~~~~~~~~gr--vpvi--aGvg-----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~----~~f 134 (304)
T 3cpr_A 68 AAEKLELLKAVREEVGDR--AKLI--AGVG-----TNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLL----AHF 134 (304)
T ss_dssp HHHHHHHHHHHHHHHTTT--SEEE--EECC-----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--ecCC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777766543 3322 2234 67788887644 457999999999886433333332 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 135 ~~ia~a~~lP 144 (304)
T 3cpr_A 135 GAIAAATEVP 144 (304)
T ss_dssp HHHHHHCCSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 35
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=39.95 E-value=85 Score=28.92 Aligned_cols=74 Identities=15% Similarity=0.087 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 52 ~~Er~~v~~~~~~~~~grvpvi----aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 118 (297)
T 2rfg_A 52 EEEHKRVVALVAEQAQGRVPVI----AGAG-----SNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLY----QHF 118 (297)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBE----EECC-----CSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEE----EccC-----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4566677777776665432322 2234 67888888644 456999999999886433333332 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 119 ~~va~a~~lP 128 (297)
T 2rfg_A 119 KMVHDAIDIP 128 (297)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHhcCCC
Confidence 6666655544
No 36
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=39.03 E-value=1.2e+02 Score=27.79 Aligned_cols=74 Identities=16% Similarity=0.150 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 52 ~~Er~~v~~~~~~~~~gr~pvi----aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 118 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANGRVPVI----AGAG-----SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIY----QHF 118 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBE----EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EecC-----CccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4566677777777665432332 2234 6678888764 4557999999999876433223222 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 119 ~~ia~a~~lP 128 (292)
T 2vc6_A 119 KAIDAASTIP 128 (292)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHhCCCC
Confidence 6666655443
No 37
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.05 E-value=1.4e+02 Score=27.54 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 56 ~~Er~~v~~~~~~~~~grvpvi----aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~----~~f 122 (300)
T 3eb2_A 56 TAQREAVVRATIEAAQRRVPVV----AGVA-----STSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIE----SYF 122 (300)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBE----EEEE-----ESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4677777777777765432332 2244 5678888764 4556999999998876443333332 445
Q ss_pred HHHhccccceeE
Q psy5712 261 HDLGKEVSVFSM 272 (386)
Q Consensus 261 ~~~~~~~g~~~~ 272 (386)
+++++..+..-+
T Consensus 123 ~~va~a~~lPii 134 (300)
T 3eb2_A 123 RAIADAVEIPVV 134 (300)
T ss_dssp HHHHHHCSSCEE
T ss_pred HHHHHHCCCCEE
Confidence 677766555433
No 38
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=36.46 E-value=94 Score=28.72 Aligned_cols=72 Identities=15% Similarity=0.069 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 63 ~eEr~~v~~~~~~~~~gr--vpVi--aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 129 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAKGK--IKLI--AHVG-----CVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHC----DHY 129 (303)
T ss_dssp HHHHHHHHHHHHHHHTTT--SEEE--EECC-----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--EecC-----CCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHH----HHH
Confidence 456677777777766543 3322 2234 66788887644 456999999999886433333332 345
Q ss_pred HHHhcccc
Q psy5712 261 HDLGKEVS 268 (386)
Q Consensus 261 ~~~~~~~g 268 (386)
+++++..+
T Consensus 130 ~~va~a~~ 137 (303)
T 2wkj_A 130 RAIIDSAD 137 (303)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhCC
Confidence 66665544
No 39
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=35.74 E-value=93 Score=28.52 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+-++. ..+| ..+++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pvi----~Gvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~----~~f 119 (291)
T 3a5f_A 53 ETERKETIKFVIDKVNKRIPVI----AGTG-----SNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLV----KHF 119 (291)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH----HHC
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----cccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 4566677777776665432322 2234 6778888764 4557999999999886432222222 334
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 120 ~~ia~a~~lP 129 (291)
T 3a5f_A 120 KAVSDAVSTP 129 (291)
T ss_dssp -CTGGGCCSC
T ss_pred HHHHHhcCCC
Confidence 5555554443
No 40
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=35.55 E-value=1.8e+02 Score=26.86 Aligned_cols=74 Identities=8% Similarity=0.066 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHH---HHHHCCCCEEEEEccccc---cccchhhhhhhH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALK---GYVKQGKKNFLLVPIAFV---NEHIETLHEMDI 257 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~---~L~~~G~~~IvvlPL~f~---~~~~eT~~~~d~ 257 (386)
.+|..+.++.+.+..+.+-++. ..+| ..++.++++ ...+.|++-++++|+||. .-+-+.++
T Consensus 60 ~~Er~~v~~~~~~~~~grvpvi----aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~---- 126 (309)
T 3fkr_A 60 DDERDVLTRTILEHVAGRVPVI----VTTS-----HYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIF---- 126 (309)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEE----EECC-----CSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHH----
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EecC-----CchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHH----
Confidence 4566677777777665432322 1234 678888886 445579999999998762 22223222
Q ss_pred HHHHHHhccccce
Q psy5712 258 EYCHDLGKEVSVF 270 (386)
Q Consensus 258 e~~~~~~~~~g~~ 270 (386)
++++.+++..+..
T Consensus 127 ~~f~~va~a~~lP 139 (309)
T 3fkr_A 127 EFYARVSDAIAIP 139 (309)
T ss_dssp HHHHHHHHHCSSC
T ss_pred HHHHHHHHhcCCC
Confidence 4456676665554
No 41
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=34.51 E-value=1e+02 Score=28.28 Aligned_cols=74 Identities=14% Similarity=0.107 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| ..+++++++.. .+.|++-++++|+||..-+.+.++ +++
T Consensus 56 ~~Er~~v~~~~~~~~~gr--vpvi--aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~----~~f 122 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAKDQ--IALI--AQVG-----SVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIK----HYY 122 (293)
T ss_dssp HHHHHHHHHHHHHHHTTS--SEEE--EECC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CeEE--EecC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777766543 3322 2234 66788887644 446999999999886433333332 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 123 ~~va~a~~lP 132 (293)
T 1f6k_A 123 DTIIAETGSN 132 (293)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHhCCCC
Confidence 6666554443
No 42
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=33.31 E-value=1.3e+02 Score=27.89 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHH---HHHHCCCCEEEEEcccccc--ccchhhhhhhHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALK---GYVKQGKKNFLLVPIAFVN--EHIETLHEMDIE 258 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~---~L~~~G~~~IvvlPL~f~~--~~~eT~~~~d~e 258 (386)
.+|..+.++.+.+..+. ++.+- ..+| ..+++++++ ...+.|++-++++|+||.. -+-+.++ +
T Consensus 66 ~~Er~~v~~~~~~~~~g--r~pvi--aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~----~ 132 (307)
T 3s5o_A 66 SSERLEVVSRVRQAMPK--NRLLL--AGSG-----CESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALI----H 132 (307)
T ss_dssp HHHHHHHHHHHHHTSCT--TSEEE--EECC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHH----H
T ss_pred HHHHHHHHHHHHHHcCC--CCcEE--EecC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHH----H
Confidence 45677777777776653 23221 2234 678888886 4456799999999877532 1222222 3
Q ss_pred HHHHHhccccce
Q psy5712 259 YCHDLGKEVSVF 270 (386)
Q Consensus 259 ~~~~~~~~~g~~ 270 (386)
+++++++..+..
T Consensus 133 ~f~~ia~a~~lP 144 (307)
T 3s5o_A 133 HYTKVADLSPIP 144 (307)
T ss_dssp HHHHHHHHCSSC
T ss_pred HHHHHHhhcCCC
Confidence 456666554444
No 43
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=32.08 E-value=2.3e+02 Score=23.81 Aligned_cols=80 Identities=13% Similarity=0.157 Sum_probs=48.1
Q ss_pred CCCEEEEEEecCcccccCCCCCceEEEeccCCCChHHHHHHHHHHHHHHHhCC--cccCCceEEEEEecCcchhhhccCC
Q psy5712 104 TAERVVVIFSQVSSVKLGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFP--AEVQKDVIILFSAHSLPLRAVNRGD 181 (386)
Q Consensus 104 g~~~~iv~~p~y~~~~~~~~~~~~~~~i~~~~~~p~~i~a~~~~I~~~l~~~~--~~~~~~~~ll~saHg~P~~~v~~Gd 181 (386)
.+|.||+.+|+| |+.-|..+..|.|++...--.+. .....+..++++.-|.|......|.
T Consensus 51 ~aD~iV~~~P~y------------------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g 112 (177)
T 3ha2_A 51 QNDRIILEFPLY------------------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGA 112 (177)
T ss_dssp TCSEEEEEEECB------------------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTS
T ss_pred hCCEEEEECChh------------------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccC
Confidence 467767788983 77788888888888754321121 1122345677888888865544443
Q ss_pred Cc---HHHHHHHHHHHHHHhcCC
Q psy5712 182 PY---PSEVGATVQGVMQELNNC 201 (386)
Q Consensus 182 ~y---~~~~~~~~~~l~~~lg~~ 201 (386)
.. ..+.....+.+..-+|..
T Consensus 113 ~~g~~~~~~l~p~~~~~~~~G~~ 135 (177)
T 3ha2_A 113 AEKFTISELMRPFEAFANKTKMM 135 (177)
T ss_dssp TTCSCHHHHTHHHHHHHHHTTCE
T ss_pred cccCCHHHHHHHHHHHHHhCCCe
Confidence 21 234444456666666764
No 44
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=31.72 E-value=10 Score=35.46 Aligned_cols=61 Identities=16% Similarity=0.247 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCccccCceEEEEeecCCchhhhc----cC----C---CCHHHHHHHHHHHHH
Q psy5712 292 WSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVN----RG----D---PYPSEVGATVQGVMQ 354 (386)
Q Consensus 292 ~~d~p~fI~ala~~I~~~l~~~~~~~~~~~~llfSaHslP~~~i~----~G----D---pY~~q~~~t~~~l~~ 354 (386)
.=-+|.-++.|.++=-..++. .+.+++..+||||||+|....+ +| | |+..-++..++...+
T Consensus 40 IVHN~~Vv~~L~~~Gv~~v~~--~ev~~g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP~V~Kvh~~v~~~~~ 111 (297)
T 3dnf_A 40 IIHNPQEVNRLKNLGVFPSQG--EEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTR 111 (297)
T ss_dssp SSSCHHHHHHHHHHTEEECCS--SCCCTTCEEEECTTCCCHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHhCCCEEech--hhCCCCCEEEEECCCCCHHHHHHHHHCCCEEEeCCCcchHHHHHHHHHHHh
Confidence 445677777665542212222 1223345899999999987753 23 1 555555555554443
No 45
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=31.01 E-value=3e+02 Score=24.84 Aligned_cols=97 Identities=13% Similarity=0.315 Sum_probs=59.8
Q ss_pred CCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeeec
Q psy5712 134 WSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVG 213 (386)
Q Consensus 134 ~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G 213 (386)
|..+|.+.+.+-+-|..+.+. ...+|+-.|+.|-. .+..+..+..+..+.++++.... +-.+ |...=-
T Consensus 72 ~~~~~~~~~~ld~~v~~a~~~-------Gi~Vild~H~~~~~---~~~~~~~~~~~~w~~ia~r~~~~-~~Vi-~el~NE 139 (303)
T 7a3h_A 72 YIDDPSVKEKVKEAVEAAIDL-------DIYVIIDWHILSDN---DPNIYKEEAKDFFDEMSELYGDY-PNVI-YEIANE 139 (303)
T ss_dssp TTTCTTHHHHHHHHHHHHHHH-------TCEEEEEEECSSSC---STTTTHHHHHHHHHHHHHHHTTC-TTEE-EECCSC
T ss_pred ccCCHHHHHHHHHHHHHHHHC-------CCEEEEEecccCCC---CchHHHHHHHHHHHHHHHHhCCC-CeEE-EEeccC
Confidence 444666666666655555432 45789999998731 22335666667777888887643 3233 642111
Q ss_pred c----CCCC---CccHHHHHHHHHHCCCCEEEEEcc
Q psy5712 214 P----LPWL---GPFTDDALKGYVKQGKKNFLLVPI 242 (386)
Q Consensus 214 ~----~~w~---~P~i~d~l~~L~~~G~~~IvvlPL 242 (386)
+ ..|. .++.+++++.+.+.+.+++|++.-
T Consensus 140 P~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~ 175 (303)
T 7a3h_A 140 PNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGT 175 (303)
T ss_dssp CCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECC
T ss_pred CCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 1 2232 146778888888889999988863
No 46
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=30.48 E-value=2.8e+02 Score=25.05 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=22.3
Q ss_pred cCCCCCccHHHHHHHHHHCCCCEEEEEcc
Q psy5712 214 PLPWLGPFTDDALKGYVKQGKKNFLLVPI 242 (386)
Q Consensus 214 ~~~w~~P~i~d~l~~L~~~G~~~IvvlPL 242 (386)
...|..+.+++-++.|++.|+..|=+ |+
T Consensus 35 ~~~w~~~~~~~d~~~l~~~G~n~vRi-~i 62 (320)
T 3nco_A 35 EGSWGVYIEDEYFKIIKERGFDSVRI-PI 62 (320)
T ss_dssp TTTTSCCCCHHHHHHHHHHTCCEEEE-CC
T ss_pred CCccCCcCCHHHHHHHHHCCCCEEEE-ee
Confidence 35787888899999999999976654 54
No 47
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=30.46 E-value=3.2e+02 Score=25.07 Aligned_cols=96 Identities=11% Similarity=0.254 Sum_probs=58.9
Q ss_pred cCCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeee
Q psy5712 133 RWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212 (386)
Q Consensus 133 ~~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~ 212 (386)
.|..+|.+.+.+-+-|..+.+. ...+|+-.|+.|-. ....+..+..+..+.++++.... +-.+ |. +
T Consensus 96 ~~~~~~~~~~~ld~~v~~a~~~-------Gi~VilD~H~~~~~---~~~~~~~~~~~~w~~~a~r~k~~-p~Vi-~e--l 161 (327)
T 3pzt_A 96 GYIDNPSVKNKVKEAVEAAKEL-------GIYVIIDWHILNDG---NPNQNKEKAKEFFKEMSSLYGNT-PNVI-YE--I 161 (327)
T ss_dssp STTTCGGGHHHHHHHHHHHHHH-------TCEEEEEEECSSSC---STTTTHHHHHHHHHHHHHHHTTC-TTEE-EE--C
T ss_pred CcccCHHHHHHHHHHHHHHHHC-------CCEEEEEeccCCCC---CchHHHHHHHHHHHHHHHHhCCC-CcEE-EE--e
Confidence 3555677766665555554432 45789999998721 11234566666677788887543 3334 64 2
Q ss_pred ccC-----CCC---CccHHHHHHHHHHCCCCEEEEEcc
Q psy5712 213 GPL-----PWL---GPFTDDALKGYVKQGKKNFLLVPI 242 (386)
Q Consensus 213 G~~-----~w~---~P~i~d~l~~L~~~G~~~IvvlPL 242 (386)
++. .|. .++.+++++.+.+.+.+++|++.-
T Consensus 162 ~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~ 199 (327)
T 3pzt_A 162 ANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGT 199 (327)
T ss_dssp CSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECC
T ss_pred ccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 322 231 245778888888888899888863
No 48
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=28.81 E-value=1.4e+02 Score=27.43 Aligned_cols=71 Identities=18% Similarity=0.238 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEcccccc-ccchhhhhhhHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVN-EHIETLHEMDIEY 259 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~-~~~eT~~~~d~e~ 259 (386)
.+|..+.++.+.+..+. ++.+- ..+| ..+++++++.. .+.|++-++++|.||.. -+-+.++ ++
T Consensus 55 ~~Er~~v~~~~~~~~~g--r~pvi--aGvg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~----~~ 121 (294)
T 3b4u_A 55 SRERQAILSSFIAAGIA--PSRIV--TGVL-----VDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLF----AW 121 (294)
T ss_dssp HHHHHHHHHHHHHTTCC--GGGEE--EEEC-----CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHH----HH
T ss_pred HHHHHHHHHHHHHHhCC--CCcEE--EeCC-----CccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHH----HH
Confidence 45666777777766553 33322 2344 67788887644 45799999999987644 2333332 34
Q ss_pred HHHHhccc
Q psy5712 260 CHDLGKEV 267 (386)
Q Consensus 260 ~~~~~~~~ 267 (386)
++++++..
T Consensus 122 f~~va~a~ 129 (294)
T 3b4u_A 122 FSAVFSKI 129 (294)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 56666655
No 49
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=28.39 E-value=2.1e+02 Score=26.42 Aligned_cols=74 Identities=15% Similarity=0.075 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCC-CEEEEEccccccccchhhhhhhHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGK-KNFLLVPIAFVNEHIETLHEMDIEY 259 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~-~~IvvlPL~f~~~~~eT~~~~d~e~ 259 (386)
.+|..+.++.+.+..+..-++. ..+| ..++.++++. ..+.|. +-++++|+||..-+-+.+. ++
T Consensus 59 ~~Er~~v~~~~~~~~~grvpVi----aGvg-----~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~----~~ 125 (311)
T 3h5d_A 59 HDEELELFAAVQKVVNGRVPLI----AGVG-----TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMY----QH 125 (311)
T ss_dssp HHHHHHHHHHHHHHSCSSSCEE----EECC-----CSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHH----HH
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----CcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHH----HH
Confidence 4577777777777765432322 1234 6778888864 344586 9999998775443223222 44
Q ss_pred HHHHhccccce
Q psy5712 260 CHDLGKEVSVF 270 (386)
Q Consensus 260 ~~~~~~~~g~~ 270 (386)
++.+++..+..
T Consensus 126 f~~va~a~~lP 136 (311)
T 3h5d_A 126 FKAIADASDLP 136 (311)
T ss_dssp HHHHHHSCSSC
T ss_pred HHHHHHhCCCC
Confidence 56676665554
No 50
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=28.26 E-value=82 Score=29.28 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=25.3
Q ss_pred eecCCchhhhccCCCCHHHHHHHHHHHHHHhcC
Q psy5712 326 SAHSLPLRAVNRGDPYPSEVGATVQGVMQELNN 358 (386)
Q Consensus 326 SaHslP~~~i~~GDpY~~q~~~t~~~l~~~l~~ 358 (386)
...+++..-+..|+.|..-.+..++.|.+.|+.
T Consensus 270 ~l~~~~~~~~~~~~~Y~~~m~~n~~~l~~aL~~ 302 (312)
T 2o1e_A 270 TLEGLSKEEQDKGLGYIDIMKQNLDALKDSLLV 302 (312)
T ss_dssp CTTCCCHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccCCcccCHHHHHHHHHHHHHHHhcc
Confidence 356666544456788999999999999999863
No 51
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=26.74 E-value=2.7e+02 Score=25.68 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHH---HHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGY---VKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L---~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| . +++++++.. .+.|++-++++|+||..-+-+.++ +++
T Consensus 64 ~eEr~~vi~~~~~~~~gr--vpVi--aGvg-----~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 129 (314)
T 3d0c_A 64 IEEAKQVATRVTELVNGR--ATVV--AGIG-----Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAV----EYY 129 (314)
T ss_dssp HHHHHHHHHHHHHHHTTS--SEEE--EEEC-----S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CeEE--ecCC-----c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHH----HHH
Confidence 456667777777766543 3322 2345 6 788887644 457999999999876433323222 345
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 130 ~~va~a~~lP 139 (314)
T 3d0c_A 130 RNIIEALDAP 139 (314)
T ss_dssp HHHHHHSSSC
T ss_pred HHHHHhCCCC
Confidence 6666655443
No 52
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=26.67 E-value=1.4e+02 Score=27.47 Aligned_cols=26 Identities=8% Similarity=-0.098 Sum_probs=22.1
Q ss_pred eccCCCChHHHHHHHHHHHHHHHhCC
Q psy5712 131 IDRWSTHPLLCKVFAERIQEELKQFP 156 (386)
Q Consensus 131 i~~~~~~p~~i~a~~~~I~~~l~~~~ 156 (386)
=+++|.+|.....+++.|.+.|.+..
T Consensus 122 dPHvWldp~~~~~~a~~I~~~L~~~d 147 (294)
T 3hh8_A 122 DPHAWLNLENGIIYSKNIAKQLIAKD 147 (294)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHC
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHhC
Confidence 35688999999999999999998763
No 53
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.76 E-value=2.7e+02 Score=25.78 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEcccccc--ccchhhhhhhHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVN--EHIETLHEMDIE 258 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~--~~~eT~~~~d~e 258 (386)
.+|..+.++.+.+..+..-++. ..+| ..++.++++. ..+.|++-++++|++|.. .+-+.++ +
T Consensus 63 ~~Er~~v~~~~~~~~~grvpvi----aGvg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~----~ 129 (318)
T 3qfe_A 63 REERAQLIATARKAVGPDFPIM----AGVG-----AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIK----S 129 (318)
T ss_dssp HHHHHHHHHHHHHHHCTTSCEE----EECC-----CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHH----H
T ss_pred HHHHHHHHHHHHHHhCCCCcEE----EeCC-----CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHH----H
Confidence 4566777777777665432322 1234 6788888874 445699999999985422 2223332 3
Q ss_pred HHHHHhccccce
Q psy5712 259 YCHDLGKEVSVF 270 (386)
Q Consensus 259 ~~~~~~~~~g~~ 270 (386)
+++++++..+..
T Consensus 130 ~f~~ia~a~~lP 141 (318)
T 3qfe_A 130 FFDDVSCQSPLP 141 (318)
T ss_dssp HHHHHHHHCSSC
T ss_pred HHHHHHhhCCCC
Confidence 456676665544
No 54
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=25.71 E-value=2.8e+02 Score=25.11 Aligned_cols=99 Identities=13% Similarity=0.234 Sum_probs=58.8
Q ss_pred cCCCChHHHHHHHHHHHHHHHhCCcccCCceEEEEEecCcchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeee
Q psy5712 133 RWSTHPLLCKVFAERIQEELKQFPAEVQKDVIILFSAHSLPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKV 212 (386)
Q Consensus 133 ~~~~~p~~i~a~~~~I~~~l~~~~~~~~~~~~ll~saHg~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~ 212 (386)
++..++.+++.+-+-|..+.+. ...+++..|+.+.- ....+.+.....+..+.++++++.. +-.+.|. .
T Consensus 73 ~~~~~~~~~~~~d~~v~~a~~~-------Gi~vildlh~~~~~-~~~~~~~~~~~~~~~~~ia~~~~~~-~~vv~~~--l 141 (320)
T 3nco_A 73 PYEIDKFFLDRVKHVVDVALKN-------DLVVIINCHHFEEL-YQAPDKYGPVLVEIWKQVAQAFKDY-PDKLFFE--I 141 (320)
T ss_dssp TCCBCHHHHHHHHHHHHHHHHT-------TCEEEEECCCCHHH-HHCHHHHHHHHHHHHHHHHHHHTTS-CTTEEEE--C
T ss_pred CCccCHHHHHHHHHHHHHHHHC-------CCEEEEEcCCCccc-ccCcHHHHHHHHHHHHHHHHHHcCC-CceEEEE--e
Confidence 3555777777666666555432 45789999987621 1111113445555567788887643 3235664 3
Q ss_pred ccCCCC-------CccHHHHHHHHHHCCCCEEEEEcc
Q psy5712 213 GPLPWL-------GPFTDDALKGYVKQGKKNFLLVPI 242 (386)
Q Consensus 213 G~~~w~-------~P~i~d~l~~L~~~G~~~IvvlPL 242 (386)
++..+. ..+.+++++.+.+.+.+++|++.-
T Consensus 142 ~NEP~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 142 FNEPAQNLTPTKWNELYPKVLGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp CSCCCTTSCHHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 333332 234677777787778888888873
No 55
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=23.26 E-value=28 Score=33.00 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=23.8
Q ss_pred ceEEEEeecCCchhhhc----cC-------CCCHHHHHHHHHHHHH
Q psy5712 320 DVIILFSAHSLPLRAVN----RG-------DPYPSEVGATVQGVMQ 354 (386)
Q Consensus 320 ~~~llfSaHslP~~~i~----~G-------DpY~~q~~~t~~~l~~ 354 (386)
+..+||||||+|....+ +| =|+..-++..++...+
T Consensus 78 g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP~V~Kvh~~v~~~~~ 123 (328)
T 3szu_A 78 GAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASR 123 (328)
T ss_dssp TCEEEECTTCCCHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCEEEECCCcchHHHHHHHHHHHh
Confidence 44899999999987753 33 1566666666665544
No 56
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=23.11 E-value=4.1e+02 Score=23.84 Aligned_cols=26 Identities=15% Similarity=-0.006 Sum_probs=22.3
Q ss_pred eccCCCChHHHHHHHHHHHHHHHhCC
Q psy5712 131 IDRWSTHPLLCKVFAERIQEELKQFP 156 (386)
Q Consensus 131 i~~~~~~p~~i~a~~~~I~~~l~~~~ 156 (386)
=+++|.+|.....+++.|.++|.+..
T Consensus 118 dPH~Wldp~~~~~~a~~I~~~L~~~d 143 (284)
T 3cx3_A 118 DPHTWLDPEKAGEEAQIIADKLSEVD 143 (284)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHhC
Confidence 45789999999999999999998763
No 57
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=22.60 E-value=4.3e+02 Score=23.84 Aligned_cols=26 Identities=27% Similarity=0.185 Sum_probs=22.5
Q ss_pred eccCCCChHHHHHHHHHHHHHHHhCC
Q psy5712 131 IDRWSTHPLLCKVFAERIQEELKQFP 156 (386)
Q Consensus 131 i~~~~~~p~~i~a~~~~I~~~l~~~~ 156 (386)
=+++|.+|.....+++.|.++|.+..
T Consensus 120 dPHvWldp~~~~~~a~~I~~~L~~~d 145 (286)
T 3gi1_A 120 DPHTWTDPVLAGEEAVNIAKELGRLD 145 (286)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHC
T ss_pred CCceecCHHHHHHHHHHHHHHHHHHC
Confidence 45789999999999999999998763
No 58
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=21.73 E-value=3.4e+02 Score=24.62 Aligned_cols=26 Identities=27% Similarity=0.203 Sum_probs=22.3
Q ss_pred eccCCCChHHHHHHHHHHHHHHHhCC
Q psy5712 131 IDRWSTHPLLCKVFAERIQEELKQFP 156 (386)
Q Consensus 131 i~~~~~~p~~i~a~~~~I~~~l~~~~ 156 (386)
=+++|.+|.....+++.|.++|.+..
T Consensus 131 DPH~Wldp~~~~~~a~~I~~~L~~~d 156 (291)
T 1pq4_A 131 DPHIWLSPTLVKRQATTIAKELAELD 156 (291)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHHC
Confidence 45689999999999999999998763
No 59
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.39 E-value=3.4e+02 Score=24.96 Aligned_cols=73 Identities=12% Similarity=0.081 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHH---HHHCCCCEEEEEccccccccchhhhhhhHHHH
Q psy5712 184 PSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKG---YVKQGKKNFLLVPIAFVNEHIETLHEMDIEYC 260 (386)
Q Consensus 184 ~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~---L~~~G~~~IvvlPL~f~~~~~eT~~~~d~e~~ 260 (386)
.+|..+.++.+.+..+.+ +.+- ..+| . +++++++. ..+.|++-++++|+||..-+-+.++ +++
T Consensus 64 ~eEr~~v~~~~v~~~~gr--vpVi--aGvg-----~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~----~~f 129 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVHGR--ALVV--AGIG-----Y-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVY----AYF 129 (316)
T ss_dssp HHHHHHHHHHHHHHHTTS--SEEE--EEEC-----S-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCC--CcEE--EEeC-----c-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHH----HHH
Confidence 457777777777776543 3322 1234 4 68888764 4456999999998775432333332 445
Q ss_pred HHHhccccce
Q psy5712 261 HDLGKEVSVF 270 (386)
Q Consensus 261 ~~~~~~~g~~ 270 (386)
+++++..+..
T Consensus 130 ~~va~a~~lP 139 (316)
T 3e96_A 130 RDIIEALDFP 139 (316)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHhCCCC
Confidence 6676665544
No 60
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=20.21 E-value=4e+02 Score=24.06 Aligned_cols=138 Identities=14% Similarity=0.119 Sum_probs=69.9
Q ss_pred cchhhhccCCCcHHHHHHHHHHHHHHhcCCCCceeEeeeeeccCCCCCccHHHHHHHHHHCCCCEEEEEccccccccchh
Q psy5712 172 LPLRAVNRGDPYPSEVGATVQGVMQELNNCNPYHLVWQSKVGPLPWLGPFTDDALKGYVKQGKKNFLLVPIAFVNEHIET 251 (386)
Q Consensus 172 ~P~~~v~~Gd~y~~~~~~~~~~l~~~lg~~~~~~~~~qs~~G~~~w~~P~i~d~l~~L~~~G~~~IvvlPL~f~~~~~eT 251 (386)
+|+...-.|..|.+...-+.+.+.+++........+ .+|+..+..+.+. |.++|+.+++. +.-+.|
T Consensus 25 vPl~v~~~~~~y~D~~di~~~efy~~~~~~~~~p~T----------Sqps~~~~~~~f~--~~~~ii~i~iS--s~LSGT 90 (278)
T 3fdj_A 25 VPLTISTDNEEFCDDGQLDIHRMLDILEKHKGRSYT----------ACPGIDAWLEAFG--DDDEIFVVTIT--AGMSGT 90 (278)
T ss_dssp ECCEEECSSCEEECSTTCCHHHHHHHHHTCCSCCEE----------ECCCHHHHHHHHT--TCSEEEEEESC--TTTCSH
T ss_pred EEEEEEECCEEEecCCCCCHHHHHHHHHhCCCCcee----------cCCCHHHHHHHHh--cCCcEEEEECC--CcHhHH
Confidence 476666566666543333344444444221111111 2788888777774 78999999985 222333
Q ss_pred hhhhhHHHHHHHhccccceeEEEecCCCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHhcCC--------ccccCceEE
Q psy5712 252 LHEMDIEYCHDLGKEVSVFSMYLFTGPGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFP--------AEVQKDVII 323 (386)
Q Consensus 252 ~~~~d~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~I~~~~d~p~fI~ala~~I~~~l~~~~--------~~~~~~~~l 323 (386)
....-.. ++.+.++. +..++++|++.+...+.--...+..+-.-++.. ......+++
T Consensus 91 y~sA~~a-a~~~~ee~--------------~~~~I~ViDS~~~s~g~g~~v~~A~~~~~~G~s~~eI~~~l~~~~~~~~~ 155 (278)
T 3fdj_A 91 YNSAMAA-RAVYLEEH--------------PQAKVRVIDSKSTGPQMRIILEQLQQMIEEGKKFEEIDGAIDAYMQKTRL 155 (278)
T ss_dssp HHHHHHH-HHHHHTTC--------------TTCEEEEEECSSCTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHH-HHHHHhhC--------------CCCeEEEEcCCchhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcceE
Confidence 3322111 11222111 234578888888887653222222111111111 011346789
Q ss_pred EEeecCCchhhhccCCC
Q psy5712 324 LFSAHSLPLRAVNRGDP 340 (386)
Q Consensus 324 lfSaHslP~~~i~~GDp 340 (386)
.|+...| .++.+|..
T Consensus 156 ~f~v~~L--~~L~kGGR 170 (278)
T 3fdj_A 156 FCSLKSL--HNLAQNGR 170 (278)
T ss_dssp EEEESCC--HHHHHTTS
T ss_pred EEEECCh--HHHHHCCc
Confidence 9999888 56666653
Done!