Query psy5714
Match_columns 163
No_of_seqs 207 out of 879
Neff 5.6
Searched_HMMs 46136
Date Sat Aug 17 00:45:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5714.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5714hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0506|consensus 100.0 1.9E-45 4.1E-50 328.0 9.9 145 1-147 412-604 (622)
2 PRK12356 glutaminase; Reviewed 100.0 6E-32 1.3E-36 233.2 5.1 73 1-75 241-313 (319)
3 PRK00971 glutaminase; Provisio 100.0 8.3E-32 1.8E-36 231.5 4.8 71 1-73 237-307 (307)
4 TIGR03814 Gln_ase glutaminase 100.0 1.1E-31 2.4E-36 230.0 5.2 71 1-73 230-300 (300)
5 PF04960 Glutaminase: Glutamin 100.0 1.8E-31 3.8E-36 227.7 1.7 71 1-73 216-286 (286)
6 COG2066 GlsA Glutaminase [Amin 100.0 1.9E-30 4.1E-35 221.4 5.1 71 1-73 239-309 (309)
7 PRK12357 glutaminase; Reviewed 100.0 2.5E-30 5.5E-35 223.4 5.4 71 1-73 246-326 (326)
8 PF12796 Ank_2: Ankyrin repeat 99.0 5.1E-10 1.1E-14 77.4 6.3 47 98-144 28-87 (89)
9 PF13637 Ank_4: Ankyrin repeat 99.0 2.8E-10 6.1E-15 73.3 3.8 40 97-136 2-54 (54)
10 PF13606 Ank_3: Ankyrin repeat 99.0 7.8E-10 1.7E-14 64.6 3.8 29 115-143 1-29 (30)
11 PHA02791 ankyrin-like protein; 98.9 6.1E-09 1.3E-13 88.8 8.9 86 48-143 90-187 (284)
12 PF00023 Ank: Ankyrin repeat H 98.8 5.7E-09 1.2E-13 61.3 3.8 30 115-144 1-30 (33)
13 PHA02875 ankyrin repeat protei 98.8 2.4E-08 5.1E-13 86.7 8.5 86 48-144 98-196 (413)
14 PHA02791 ankyrin-like protein; 98.8 2.7E-08 5.9E-13 84.8 8.3 84 47-143 25-121 (284)
15 KOG4412|consensus 98.8 6.2E-09 1.3E-13 85.1 3.9 51 93-143 69-133 (226)
16 PHA02743 Viral ankyrin protein 98.7 7E-08 1.5E-12 75.3 9.2 49 96-144 94-156 (166)
17 PF12796 Ank_2: Ankyrin repeat 98.7 4.7E-08 1E-12 67.5 5.8 46 100-145 1-55 (89)
18 KOG0510|consensus 98.7 2.6E-08 5.6E-13 94.9 5.9 86 48-144 269-369 (929)
19 PF13857 Ank_5: Ankyrin repeat 98.6 1.7E-08 3.8E-13 65.9 2.6 38 107-144 7-44 (56)
20 KOG0509|consensus 98.6 3.1E-08 6.8E-13 91.8 4.1 50 95-144 77-140 (600)
21 PHA02736 Viral ankyrin protein 98.6 1.3E-07 2.8E-12 72.0 6.7 48 96-143 92-153 (154)
22 PLN03192 Voltage-dependent pot 98.6 1.7E-07 3.6E-12 89.6 8.4 48 98-145 624-684 (823)
23 PHA02875 ankyrin repeat protei 98.6 2.2E-07 4.7E-12 80.7 8.4 45 98-142 70-128 (413)
24 PHA03100 ankyrin repeat protei 98.6 2.3E-07 5E-12 81.6 8.4 47 97-143 216-277 (480)
25 KOG4214|consensus 98.6 6.4E-08 1.4E-12 71.9 4.0 50 97-146 35-97 (117)
26 KOG0512|consensus 98.6 1.3E-07 2.8E-12 77.2 5.9 51 95-145 96-159 (228)
27 PHA02874 ankyrin repeat protei 98.5 2.5E-07 5.4E-12 81.4 8.1 85 48-143 120-217 (434)
28 PHA02874 ankyrin repeat protei 98.5 2.6E-07 5.7E-12 81.2 7.5 86 48-144 153-283 (434)
29 PHA02741 hypothetical protein; 98.5 4.4E-07 9.6E-12 70.6 7.2 48 96-143 60-126 (169)
30 KOG0195|consensus 98.5 1.9E-07 4.1E-12 81.3 4.9 83 49-142 31-126 (448)
31 KOG4177|consensus 98.5 2.5E-07 5.5E-12 91.2 6.3 74 66-145 516-602 (1143)
32 PHA02878 ankyrin repeat protei 98.5 5.6E-07 1.2E-11 80.2 7.8 48 96-143 201-262 (477)
33 PHA02741 hypothetical protein; 98.4 5.3E-07 1.2E-11 70.1 6.5 47 96-142 98-158 (169)
34 PHA03100 ankyrin repeat protei 98.4 5.9E-07 1.3E-11 79.1 7.5 88 48-144 102-204 (480)
35 PHA02795 ankyrin-like protein; 98.4 3.6E-07 7.9E-12 82.6 6.1 72 69-146 200-292 (437)
36 PHA03095 ankyrin-like protein; 98.4 6.5E-07 1.4E-11 78.5 7.3 89 48-144 43-147 (471)
37 PHA02884 ankyrin repeat protei 98.4 8.8E-07 1.9E-11 76.5 7.8 50 95-144 69-132 (300)
38 PHA02743 Viral ankyrin protein 98.4 3.9E-07 8.3E-12 71.1 4.8 50 95-144 56-123 (166)
39 PHA02876 ankyrin repeat protei 98.4 8.2E-07 1.8E-11 82.5 7.4 47 98-144 410-471 (682)
40 PHA02878 ankyrin repeat protei 98.4 6.4E-07 1.4E-11 79.8 6.2 49 96-144 168-229 (477)
41 PHA03095 ankyrin-like protein; 98.4 1.7E-06 3.7E-11 75.8 8.4 87 48-143 183-284 (471)
42 KOG4412|consensus 98.3 6.1E-07 1.3E-11 73.5 4.8 47 96-142 106-165 (226)
43 KOG4214|consensus 98.3 4.6E-07 1E-11 67.4 3.7 48 99-146 5-64 (117)
44 KOG0515|consensus 98.3 6.5E-07 1.4E-11 82.6 5.3 50 93-142 580-642 (752)
45 KOG0502|consensus 98.3 3.1E-07 6.6E-12 77.3 2.4 50 95-144 159-254 (296)
46 PHA02859 ankyrin repeat protei 98.3 1.2E-06 2.6E-11 70.7 5.4 51 95-145 50-119 (209)
47 KOG0514|consensus 98.3 1.1E-06 2.5E-11 78.0 5.2 86 47-138 297-395 (452)
48 PHA02946 ankyin-like protein; 98.3 1.1E-06 2.4E-11 78.8 4.9 48 97-144 298-351 (446)
49 PHA02798 ankyrin-like protein; 98.3 3.3E-06 7.1E-11 75.7 7.9 91 48-144 67-176 (489)
50 PHA02946 ankyin-like protein; 98.2 1.9E-06 4.2E-11 77.2 6.2 50 95-144 71-135 (446)
51 PHA02736 Viral ankyrin protein 98.2 6.6E-07 1.4E-11 68.0 2.5 49 95-143 54-120 (154)
52 KOG0510|consensus 98.2 3E-06 6.6E-11 81.1 7.3 51 96-146 225-303 (929)
53 PTZ00322 6-phosphofructo-2-kin 98.2 3.9E-06 8.4E-11 78.9 7.4 44 95-138 114-170 (664)
54 PLN03192 Voltage-dependent pot 98.2 3.8E-06 8.3E-11 80.3 7.0 41 97-137 559-612 (823)
55 PHA02730 ankyrin-like protein; 98.2 2.7E-06 5.8E-11 80.6 5.5 47 96-142 41-105 (672)
56 PHA02859 ankyrin repeat protei 98.1 8.6E-06 1.9E-10 65.8 7.3 47 97-143 124-186 (209)
57 PHA02798 ankyrin-like protein; 98.1 6.9E-06 1.5E-10 73.6 7.1 49 95-143 257-318 (489)
58 KOG0508|consensus 98.1 9.2E-07 2E-11 80.8 1.4 45 98-142 152-209 (615)
59 PHA02884 ankyrin repeat protei 98.1 5.4E-06 1.2E-10 71.6 5.7 48 97-144 34-98 (300)
60 PF13857 Ank_5: Ankyrin repeat 98.1 2.2E-06 4.7E-11 55.9 2.5 29 95-123 15-56 (56)
61 KOG0195|consensus 98.1 3.1E-06 6.8E-11 73.8 4.2 57 96-156 34-103 (448)
62 KOG0502|consensus 98.1 4.4E-06 9.4E-11 70.5 4.9 64 81-144 114-188 (296)
63 PHA02989 ankyrin repeat protei 98.1 5.8E-06 1.3E-10 74.2 6.0 47 95-141 255-314 (494)
64 KOG0515|consensus 98.1 4.5E-06 9.8E-11 77.2 5.3 63 84-146 538-613 (752)
65 KOG0508|consensus 98.0 2.8E-06 6E-11 77.7 3.1 50 98-147 119-181 (615)
66 PF13637 Ank_4: Ankyrin repeat 98.0 4E-06 8.8E-11 53.7 2.8 30 116-145 1-30 (54)
67 KOG0509|consensus 98.0 6.9E-06 1.5E-10 76.5 5.1 48 96-143 112-172 (600)
68 PHA02876 ankyrin repeat protei 98.0 2.1E-05 4.6E-10 73.1 8.1 48 96-143 178-238 (682)
69 PTZ00322 6-phosphofructo-2-kin 98.0 9.9E-06 2.2E-10 76.2 6.0 47 98-144 84-143 (664)
70 COG0666 Arp FOG: Ankyrin repea 98.0 1.1E-05 2.4E-10 61.2 5.0 50 95-144 105-175 (235)
71 PHA02716 CPXV016; CPX019; EVM0 98.0 2E-05 4.4E-10 75.6 7.7 42 103-144 291-347 (764)
72 PHA02716 CPXV016; CPX019; EVM0 98.0 7.4E-06 1.6E-10 78.6 4.7 53 94-146 495-570 (764)
73 PHA02989 ankyrin repeat protei 98.0 1.6E-05 3.4E-10 71.4 6.4 33 112-144 252-284 (494)
74 cd00204 ANK ankyrin repeats; 98.0 7.1E-05 1.5E-09 52.0 8.4 85 48-143 3-100 (126)
75 PHA02795 ankyrin-like protein; 97.9 1.1E-05 2.4E-10 73.1 5.0 49 96-144 188-249 (437)
76 KOG0512|consensus 97.9 1.2E-05 2.6E-10 65.7 4.7 46 99-144 66-125 (228)
77 KOG1710|consensus 97.9 1E-05 2.2E-10 70.5 4.3 50 94-143 43-106 (396)
78 KOG0505|consensus 97.9 6.3E-06 1.4E-10 75.6 2.8 51 93-143 70-133 (527)
79 KOG0507|consensus 97.9 6.1E-06 1.3E-10 78.6 1.9 83 56-144 48-143 (854)
80 TIGR00870 trp transient-recept 97.8 1.9E-05 4.2E-10 74.3 4.8 49 95-143 127-202 (743)
81 KOG0511|consensus 97.7 3.9E-05 8.4E-10 68.9 5.0 47 98-144 38-97 (516)
82 KOG4177|consensus 97.7 6.2E-05 1.3E-09 74.8 6.1 90 42-142 530-632 (1143)
83 smart00248 ANK ankyrin repeats 97.7 8E-05 1.7E-09 38.7 4.0 29 115-143 1-29 (30)
84 PHA02917 ankyrin-like protein; 97.7 0.0001 2.3E-09 69.6 7.3 64 74-143 436-513 (661)
85 KOG0514|consensus 97.7 7.1E-05 1.5E-09 66.8 5.4 78 50-138 338-429 (452)
86 KOG0505|consensus 97.6 3.9E-05 8.4E-10 70.5 3.3 48 96-143 198-258 (527)
87 PHA02917 ankyrin-like protein; 97.5 0.00012 2.6E-09 69.1 5.1 46 98-143 105-165 (661)
88 cd00204 ANK ankyrin repeats; 97.5 0.00022 4.7E-09 49.5 5.1 48 96-143 7-67 (126)
89 COG0666 Arp FOG: Ankyrin repea 97.5 0.00029 6.2E-09 53.3 5.9 89 48-139 102-203 (235)
90 PHA02792 ankyrin-like protein; 97.5 0.00022 4.7E-09 67.4 6.0 49 96-144 374-438 (631)
91 PHA02730 ankyrin-like protein; 97.3 0.00029 6.4E-09 66.9 5.3 48 96-143 462-525 (672)
92 KOG3676|consensus 97.3 0.00033 7.1E-09 67.2 5.1 53 95-147 183-271 (782)
93 TIGR00870 trp transient-recept 97.3 0.00045 9.8E-09 65.1 5.7 42 98-139 19-76 (743)
94 KOG0818|consensus 97.2 0.00072 1.6E-08 62.5 5.7 69 93-161 164-255 (669)
95 KOG0705|consensus 97.0 0.0011 2.3E-08 62.3 5.0 50 94-143 659-721 (749)
96 KOG0520|consensus 97.0 0.00095 2.1E-08 65.4 4.9 87 48-143 565-668 (975)
97 KOG2384|consensus 96.7 0.0011 2.4E-08 54.8 2.8 41 98-138 14-68 (223)
98 KOG0522|consensus 96.6 0.0032 6.9E-08 58.3 5.3 43 97-139 56-111 (560)
99 PHA02792 ankyrin-like protein; 96.6 0.0032 6.9E-08 59.6 5.4 49 95-143 409-480 (631)
100 KOG0507|consensus 96.6 0.0012 2.6E-08 63.4 2.5 48 95-142 48-108 (854)
101 KOG0783|consensus 96.6 0.00078 1.7E-08 65.5 1.2 47 96-142 52-112 (1267)
102 KOG1710|consensus 96.3 0.01 2.3E-07 52.0 6.2 81 48-138 41-134 (396)
103 KOG0782|consensus 95.4 0.017 3.6E-07 54.7 4.1 51 96-146 899-964 (1004)
104 KOG0818|consensus 95.3 0.02 4.2E-07 53.3 4.0 47 98-144 135-195 (669)
105 KOG0522|consensus 95.2 0.018 3.8E-07 53.5 3.5 49 105-153 44-98 (560)
106 KOG4369|consensus 95.0 0.017 3.7E-07 58.3 2.8 34 114-147 957-990 (2131)
107 KOG3676|consensus 95.0 0.039 8.4E-07 53.3 5.1 50 95-144 142-212 (782)
108 KOG3609|consensus 94.4 0.055 1.2E-06 52.6 4.7 47 98-144 90-159 (822)
109 KOG2384|consensus 94.2 0.085 1.8E-06 43.8 4.8 42 106-147 2-44 (223)
110 KOG4369|consensus 93.9 0.024 5.1E-07 57.3 1.1 49 95-143 789-851 (2131)
111 PF13606 Ank_3: Ankyrin repeat 93.3 0.048 1E-06 31.3 1.3 17 97-113 3-19 (30)
112 PF00023 Ank: Ankyrin repeat H 93.1 0.046 1E-06 31.4 1.1 17 97-113 3-19 (33)
113 KOG0506|consensus 92.3 0.04 8.7E-07 51.1 0.1 40 117-156 540-586 (622)
114 KOG0705|consensus 92.2 0.16 3.5E-06 48.1 3.9 30 114-143 659-688 (749)
115 KOG0521|consensus 89.0 0.22 4.8E-06 48.5 1.8 49 97-145 657-718 (785)
116 KOG0782|consensus 88.5 0.52 1.1E-05 45.0 3.8 42 99-140 869-923 (1004)
117 KOG2505|consensus 86.9 0.47 1E-05 44.3 2.5 28 116-143 430-457 (591)
118 KOG0783|consensus 80.4 0.98 2.1E-05 44.8 1.8 35 109-143 45-79 (1267)
119 PF06128 Shigella_OspC: Shigel 79.3 3.5 7.6E-05 35.4 4.6 31 114-144 252-282 (284)
120 KOG2505|consensus 65.2 9.3 0.0002 36.0 4.2 39 96-137 430-481 (591)
121 KOG0520|consensus 63.2 2.7 5.8E-05 42.1 0.3 44 95-138 640-702 (975)
122 PF11929 DUF3447: Domain of un 57.7 14 0.0003 25.1 3.1 40 99-138 9-54 (76)
123 KOG3609|consensus 54.2 12 0.00025 37.0 3.0 44 99-142 28-88 (822)
124 PF09722 DUF2384: Protein of u 39.4 44 0.00096 21.0 3.1 31 107-137 9-49 (54)
125 KOG0521|consensus 37.4 23 0.0005 34.8 2.2 31 114-144 654-684 (785)
126 PF03158 DUF249: Multigene fam 36.9 44 0.00096 27.6 3.4 39 99-137 146-191 (192)
127 cd01021 GEWL Goose Egg White L 32.6 33 0.00071 27.5 2.0 22 98-119 123-144 (166)
128 COG5447 Uncharacterized conser 26.4 68 0.0015 24.3 2.6 64 28-94 33-101 (115)
129 TIGR02293 TAS_TIGR02293 putati 25.8 78 0.0017 23.9 3.0 26 115-140 103-131 (133)
130 PF08077 Cm_res_leader: Chlora 24.1 60 0.0013 16.4 1.3 10 25-34 2-11 (17)
131 PF10683 DBD_Tnp_Hermes: Herme 22.2 5 0.00011 27.8 -3.8 37 118-157 29-65 (68)
132 smart00857 Resolvase Resolvase 21.9 2.4E+02 0.0053 20.4 5.0 75 56-142 19-98 (148)
No 1
>KOG0506|consensus
Probab=100.00 E-value=1.9e-45 Score=328.05 Aligned_cols=145 Identities=52% Similarity=0.901 Sum_probs=134.7
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhh-
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKYDNLRYA- 79 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~- 79 (163)
|-|||||..+ |+|||.||+||||||||+|+.|||++|||++|||+||+-|||+||++||+.|+..||||+||.|+|.
T Consensus 412 MySCGMYD~S--GqFaFhVGLPAKSgVsG~mivVvPNVMGi~l~SPpLDklGNs~rGv~Fc~~Lvs~fNFHNYD~L~h~~ 489 (622)
T KOG0506|consen 412 MYSCGMYDFS--GQFAFHVGLPAKSGVSGAMIVVVPNVMGIALYSPPLDKLGNSCRGVAFCRQLVSKFNFHNYDSLRHPD 489 (622)
T ss_pred HHhccccccc--cceEEEecCcccccccccEEEEeccceeeeeccCCchhhcCccccHHHHHHHHHHhcccCchhhcccc
Confidence 6799999986 9999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCcccccchhHHHHHHHHHcCChhhhh----------------------------------------------
Q psy5714 80 ANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR---------------------------------------------- 113 (163)
Q Consensus 80 ~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk---------------------------------------------- 113 (163)
..|+||||..+..+.+.++++++||+.||+.++|
T Consensus 490 ~~K~DPRR~~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~k 569 (622)
T KOG0506|consen 490 NRKIDPRREGGPRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPK 569 (622)
T ss_pred cccCCcccccCcccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChh
Confidence 5699999999888888888999999999999988
Q ss_pred -ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy5714 114 -RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAED 147 (163)
Q Consensus 114 -r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~ 147 (163)
|||||||++|.+++|.+|+++|.++-..++..|.
T Consensus 570 DRw~rtPlDdA~~F~h~~v~k~L~~~~~~y~~~~~ 604 (622)
T KOG0506|consen 570 DRWGRTPLDDAKHFKHKEVVKLLEEAQYPYTLMPE 604 (622)
T ss_pred hccCCCcchHhHhcCcHHHHHHHHHHhcccccCch
Confidence 8999999999999999999999987776655444
No 2
>PRK12356 glutaminase; Reviewed
Probab=99.97 E-value=6e-32 Score=233.22 Aligned_cols=73 Identities=41% Similarity=0.708 Sum_probs=70.8
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcchhh
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKYDN 75 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~ 75 (163)
|.|||||.. .|+|||+||+|||||||||||+||||++|||||||+||++|||++|+++||.|+++++||+|+.
T Consensus 241 M~TCGmYd~--SG~fa~~VGlPaKSGVgGgIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~if~~ 313 (319)
T PRK12356 241 MTMEGLYER--SGDWAYTVGLPGKSGVGGGILAVVPGKMGIAAFSPPLDSAGNSVRGQKAVAYVADKLGLNLFKG 313 (319)
T ss_pred HHHcCCccc--hhhHHHHhCCccccCccceeEEEeCCceEEEEECCCcCCCCCcHHHHHHHHHHHHHhCCCccCC
Confidence 899999997 5999999999999999999999999999999999999999999999999999999999999943
No 3
>PRK00971 glutaminase; Provisional
Probab=99.97 E-value=8.3e-32 Score=231.50 Aligned_cols=71 Identities=42% Similarity=0.652 Sum_probs=69.5
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||++|||||||+||++|||++|+++||.|+++++||+|
T Consensus 237 M~TcGmYD~--SG~fa~~VGlPaKSGVgGgIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~if 307 (307)
T PRK00971 237 MLTCGMYDA--SGEFAYRVGLPAKSGVGGGILAVVPGEMAIAVWSPELDAKGNSLAGTAALERLSQRLGLSIF 307 (307)
T ss_pred HHHcCCccc--hHHHHHHcCCccccCCcceEEEEeCCCcEEEEECCCcCCCCCCHHHHHHHHHHHHHhCCCcC
Confidence 889999997 59999999999999999999999999999999999999999999999999999999999987
No 4
>TIGR03814 Gln_ase glutaminase A. This family describes the enzyme glutaminase, from a larger family that includes serine-dependent beta-lactamases and penicillin-binding proteins. Many bacteria have two isozymes. This model is based on selected known glutaminases and their homologs within prokaryotes, with the exclusion of highly-derived (long branch) and architecturally varied homologs, so as to achieve conservative assignments. A sharp drop in scores occurs below 250, and cutoffs are set accordingly. The enzyme converts glutamine to glutamate, with the release of ammonia. Members tend to be described as glutaminase A (glsA), where B (glsB) is unknown and may not be homologous (as in Rhizobium etli). Some species have two isozymes that may both be designated A (GlsA1 and GlsA2).
Probab=99.97 E-value=1.1e-31 Score=229.99 Aligned_cols=71 Identities=45% Similarity=0.695 Sum_probs=69.5
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||++|||||||+||++|||++|+++||.|+++++||+|
T Consensus 230 M~TcGmYd~--SG~fa~~VGlPaKSGVgGgIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~if 300 (300)
T TIGR03814 230 MLTCGLYDA--SGEFAYRVGLPAKSGVGGGILAVVPGKMGIAVFSPALDAAGNSVAGQKALELLSEKLGLSIF 300 (300)
T ss_pred HHHcCCccc--hhhHHHHcCCccccCccceEEEEeCCceEEEEECCCcCCCCCCHHHHHHHHHHHHHhCCCcC
Confidence 899999997 59999999999999999999999999999999999999999999999999999999999987
No 5
>PF04960 Glutaminase: Glutaminase; InterPro: IPR015868 Glutaminases (3.5.1.2 from EC) deaminate glutamine to glutamate. In Bacillus subtilis, glutaminase is encoded by glnA, which is part of an operon, glnA-glnT (formerly ybgJ-ybgH), where glnT encodes a glutamine transporter. The glnA-glnT operon is regulated by the 2-component system GlnK-GlnL in response to glutamine []. This entry represents the core structural motif of a family of glutaminases that include GlnA, which are characterised by their beta-lactamase-like topology, containing a cluster of alpha-helices and an alpha/beta sandwich. This family describes the enzyme glutaminase, from a larger family that includes serine-dependent beta-lactamases and penicillin-binding proteins. Many bacteria have two isozymes. This model is based on selected known glutaminases and their homologs within prokaryotes, with the exclusion of highly-derived (long branch) and architecturally varied homologs, so as to achieve conservative assignments. A sharp drop in scores occurs below 250, and cutoffs are set accordingly. The enzyme converts glutamine to glutamate, with the release of ammonia. Members tend to be described as glutaminase A (glsA), where B (glsB) is unknown and may not be homologous (as in Rhizobium etli. Some species have two isozymes that may both be designated A (GlsA1 and GlsA2). ; GO: 0004359 glutaminase activity, 0006541 glutamine metabolic process; PDB: 2OSU_B 3BRM_A 3AGF_B 1MKI_B 2PBY_C 3SS5_D 3SS3_A 3SS4_C 3UO9_C 3UNW_C ....
Probab=99.96 E-value=1.8e-31 Score=227.69 Aligned_cols=71 Identities=46% Similarity=0.787 Sum_probs=64.5
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||++|||+|||+||++|||++|+++||.|+++++||+|
T Consensus 216 M~tcGmYd~--SG~fa~~vGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~iF 286 (286)
T PF04960_consen 216 MLTCGMYDY--SGEFAYRVGLPAKSGVGGGILAVVPGRMGIAVYSPPLDEKGNSVRGMKALEQLSERLGLHIF 286 (286)
T ss_dssp HHHHTTGGG--HHHHHHHT-S-EEE-TTSEEEEEETTTEEEEEE-SEB-TTSSBHHHHHHHHHHHHHHTTSTT
T ss_pred HHhcCCCcc--hHHHHHHcCCccccCCCceEEEEeCCCcEEEEECCCCCCCCCcHHHHHHHHHHHHHhCCCCC
Confidence 789999997 59999999999999999999999999999999999999999999999999999999999998
No 6
>COG2066 GlsA Glutaminase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.9e-30 Score=221.39 Aligned_cols=71 Identities=41% Similarity=0.700 Sum_probs=69.4
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|.|||||.+ .|+|||+||+|+|||||||||+||||.+|||||||+||+.|||++|++++|.|++.++|++|
T Consensus 239 M~TcGmYd~--sG~fa~rVGlP~KSGVgGGI~AvvPg~~gIav~sP~Ld~~GNSv~G~~~le~Ls~~~g~sif 309 (309)
T COG2066 239 MLTCGMYDA--SGEFAYRVGLPAKSGVGGGIMAVVPGEMGIAVWSPALDEAGNSVAGIAALEQLSQQLGLSIF 309 (309)
T ss_pred HHHcccccc--chhhHhhcCCccccCcccceEEEccCCcEEEEECCccCcCCCchHHHHHHHHHHHHhCcccC
Confidence 889999997 49999999999999999999999999999999999999999999999999999999999987
No 7
>PRK12357 glutaminase; Reviewed
Probab=99.96 E-value=2.5e-30 Score=223.40 Aligned_cols=71 Identities=34% Similarity=0.634 Sum_probs=69.1
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEec----------CceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCC
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVP----------NTMGIALFSPPLDALGNSCRGVQFCEELVKTFNF 70 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp----------~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l 70 (163)
|.|||||.. .|+|||+||+|+|||||||||+||| |++|||+|||+||++|||++|+++||.|+++++|
T Consensus 246 M~tcGmYd~--SG~fa~~VGlPaKSGVgGGIlavvPg~~~~~~~~~g~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l 323 (326)
T PRK12357 246 MLTCGMYNA--SGKFAAFVGLPAKSGVSGGIMTLVPPKSRKDLPFQDGCGIGIYGPAIDEYGNSLPGIMLLKHIAKEWDL 323 (326)
T ss_pred HHhcCCccc--hhhHHHHhCCccccCcCceeEEEecCcccccccccCceEEEEECCCcCCCCCcHHHHHHHHHHHHHhCC
Confidence 899999997 4999999999999999999999999 7899999999999999999999999999999999
Q ss_pred cch
Q psy5714 71 HKY 73 (163)
Q Consensus 71 ~if 73 (163)
|+|
T Consensus 324 ~if 326 (326)
T PRK12357 324 SIF 326 (326)
T ss_pred CcC
Confidence 987
No 8
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.05 E-value=5.1e-10 Score=77.44 Aligned_cols=47 Identities=21% Similarity=0.285 Sum_probs=43.2
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
++||+|+..|+++.++ ..|+||||+|+..|+.+++++|+++|++...
T Consensus 28 ~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 28 TALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp BHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTS
T ss_pred CHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 4999999999999999 4799999999999999999999999998764
No 9
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.02 E-value=2.8e-10 Score=73.31 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHH
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILE 136 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl 136 (163)
.|+||+||..|+++.++ ++|+||||+|+.+||.+++++|+
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 36999999999999999 68999999999999999999996
No 10
>PF13606 Ank_3: Ankyrin repeat
Probab=98.96 E-value=7.8e-10 Score=64.59 Aligned_cols=29 Identities=24% Similarity=0.208 Sum_probs=27.3
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+|+||||+|+++|+.|+|++|+++|+++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 59999999999999999999999999875
No 11
>PHA02791 ankyrin-like protein; Provisional
Probab=98.91 E-value=6.1e-09 Score=88.81 Aligned_cols=86 Identities=9% Similarity=-0.011 Sum_probs=51.4
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh------------cc
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------RW 115 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------r~ 115 (163)
.|..|++..-.+. +.-+..+...|......++.+... ...||||+|+..|+.+.++ ..
T Consensus 90 ~d~~G~TpLh~Aa-----~~g~~eivk~Ll~~gadin~~~~~-----g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~ 159 (284)
T PHA02791 90 FDDKGNTALYYAV-----DSGNMQTVKLFVKKNWRLMFYGKT-----GWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAI 159 (284)
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCcCccCCC-----CCcHHHHHHHHcCCHHHHHHHHhcCCccccccc
Confidence 5777888877776 333444444444322233322211 1136777777777777766 12
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
|+||||+|++.||.++|++|+++||+..
T Consensus 160 g~TpLh~Aa~~g~~eiv~lLL~~gAd~n 187 (284)
T PHA02791 160 LLSCIHITIKNGHVDMMILLLDYMTSTN 187 (284)
T ss_pred CccHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 5777777777777777777777777654
No 12
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.81 E-value=5.7e-09 Score=61.29 Aligned_cols=30 Identities=23% Similarity=0.237 Sum_probs=28.2
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+|+||||+|+..|+.++|++|+++|+++..
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 599999999999999999999999999874
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.78 E-value=2.4e-08 Score=86.72 Aligned_cols=86 Identities=17% Similarity=0.054 Sum_probs=60.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.+..|+++.-.+. ..-+..+...|.. ...|+.... ....||||+|+..|+.+.++ .
T Consensus 98 ~~~~g~tpL~~A~-----~~~~~~iv~~Ll~--~gad~~~~~----~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~ 166 (413)
T PHA02875 98 FYKDGMTPLHLAT-----ILKKLDIMKLLIA--RGADPDIPN----TDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDC 166 (413)
T ss_pred ccCCCCCHHHHHH-----HhCCHHHHHHHHh--CCCCCCCCC----CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Confidence 3456676665555 2333444444443 334443332 23457999999999999888 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.+++++|+++|++...
T Consensus 167 ~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~ 196 (413)
T PHA02875 167 CGCTPLIIAMAKGDIAICKMLLDSGANIDY 196 (413)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCc
Confidence 799999999999999999999999998764
No 14
>PHA02791 ankyrin-like protein; Provisional
Probab=98.77 E-value=2.7e-08 Score=84.85 Aligned_cols=84 Identities=14% Similarity=-0.010 Sum_probs=61.2
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 47 PLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 47 ~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
..|..|++..-.+. +.-+..+...|.... .++.... ..||||+|+..|+.+.++
T Consensus 25 ~~D~~G~TpLh~Aa-----~~g~~eiv~~Ll~~g--a~~n~~d------~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d 91 (284)
T PHA02791 25 KADVHGHSALYYAI-----ADNNVRLVCTLLNAG--ALKNLLE------NEFPLHQAATLEDTKIVKILLFSGMDDSQFD 91 (284)
T ss_pred CCCCCCCcHHHHHH-----HcCCHHHHHHHHHCc--CCCcCCC------CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Confidence 46888999887776 333444444444332 2322221 237999999999999888
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+.|+||||+|+..|+.++|++|+++|++..
T Consensus 92 ~~G~TpLh~Aa~~g~~eivk~Ll~~gadin 121 (284)
T PHA02791 92 DKGNTALYYAVDSGNMQTVKLFVKKNWRLM 121 (284)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 578999999999999999999999998763
No 15
>KOG4412|consensus
Probab=98.76 E-value=6.2e-09 Score=85.11 Aligned_cols=51 Identities=24% Similarity=0.115 Sum_probs=46.3
Q ss_pred cchhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 93 IGLSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 93 ~~~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+...-||||+||..|+.|.|+ +.|+||||||+..|..||+++|+++||.+.
T Consensus 69 DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~ 133 (226)
T KOG4412|consen 69 DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR 133 (226)
T ss_pred cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc
Confidence 456778999999999999999 679999999999999999999999998764
No 16
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.74 E-value=7e-08 Score=75.25 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=43.2
Q ss_pred hHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..||||+|+..|+.+.++ ..|+||||+|+..++.+++++|+++||+...
T Consensus 94 g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~ 156 (166)
T PHA02743 94 GNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDD 156 (166)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 347999999999988877 4689999999999999999999999998864
No 17
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.68 E-value=4.7e-08 Score=67.50 Aligned_cols=46 Identities=26% Similarity=0.307 Sum_probs=41.6
Q ss_pred HHHHHHcCChhhhh---------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 100 LLFNAAAGNISALR---------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 100 L~~AA~~Gdl~~vk---------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
||+||++|+++.++ ..|+||||+|+..|+.+++++|+++|++....
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 55 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINLGNTALHYAAENGNLEIVKLLLENGADINSQ 55 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTSSSBHHHHHHHTTTHHHHHHHHHTTTCTT-B
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhccccccc
Confidence 79999999999999 34899999999999999999999999988653
No 18
>KOG0510|consensus
Probab=98.68 E-value=2.6e-08 Score=94.91 Aligned_cols=86 Identities=23% Similarity=0.191 Sum_probs=71.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------- 113 (163)
-|..|++..-.+. ++-+...+|.|+.....++-++++++ +|||+||..|.++.|+
T Consensus 269 ~d~dg~tpLH~a~-----r~G~~~svd~Ll~~Ga~I~~kn~d~~------spLH~AA~yg~~ntv~rLL~~~~~rllne~ 337 (929)
T KOG0510|consen 269 EDNDGCTPLHYAA-----RQGGPESVDNLLGFGASINSKNKDEE------SPLHFAAIYGRINTVERLLQESDTRLLNES 337 (929)
T ss_pred ccccCCchHHHHH-----HcCChhHHHHHHHcCCcccccCCCCC------CchHHHHHcccHHHHHHHHhCcCccccccc
Confidence 3566666655554 88899999999877666777766555 6999999999999999
Q ss_pred -ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 -RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 -r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
-.|+||||.|+++||..||++|++.||...+
T Consensus 338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~ 369 (929)
T KOG0510|consen 338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN 369 (929)
T ss_pred cccCCCchhhhhhcCHHHHHHHHHhcChhhhc
Confidence 2599999999999999999999999998885
No 19
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.65 E-value=1.7e-08 Score=65.92 Aligned_cols=38 Identities=18% Similarity=0.438 Sum_probs=25.4
Q ss_pred CChhhhhccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 107 GNISALRRWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 107 Gdl~~vkr~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.+++.....|+||||+|+..||.++|++|+++|++...
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~ 44 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA 44 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC
Confidence 46666678999999999999999999999999998874
No 20
>KOG0509|consensus
Probab=98.60 E-value=3.1e-08 Score=91.82 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+..++|||||.++.++.+| .-+.||||||+++||..||++|+++||+++-
T Consensus 77 ~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~ 140 (600)
T KOG0509|consen 77 EGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTL 140 (600)
T ss_pred CCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCce
Confidence 5678999999999999999 3579999999999999999999999999864
No 21
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.60 E-value=1.3e-07 Score=71.96 Aligned_cols=48 Identities=17% Similarity=0.050 Sum_probs=41.5
Q ss_pred hHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..||||+|+..|+.+.++ +.|+||||+|+..|+.+++++|+++||+..
T Consensus 92 g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 92 GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 447999999999988877 478999999999999999999999998753
No 22
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.58 E-value=1.7e-07 Score=89.59 Aligned_cols=48 Identities=19% Similarity=0.185 Sum_probs=40.5
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
++||+||.+|+++.++ .+|+||||+|+..||.++|++|+++||+....
T Consensus 624 ~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~ 684 (823)
T PLN03192 624 DLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKA 684 (823)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCC
Confidence 4566777777777776 68999999999999999999999999988653
No 23
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.58 E-value=2.2e-07 Score=80.74 Aligned_cols=45 Identities=24% Similarity=0.316 Sum_probs=23.6
Q ss_pred HHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 98 VTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
++||.|+..|+++.++ .+|+||||+|+..|+.++|++|+++|++.
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~ 128 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP 128 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 3555555555555554 23555555555555555555555555543
No 24
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.57 E-value=2.3e-07 Score=81.65 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCC--hhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 97 IVTLLFNAAAGN--ISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 97 ~~~L~~AA~~Gd--l~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||+|+..|+ ++.++ ..|+||||+|+..|+.++|++|+++||+..
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n 277 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPN 277 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 578888888888 77777 468889999988888899999988888664
No 25
>KOG4214|consensus
Probab=98.56 E-value=6.4e-08 Score=71.93 Aligned_cols=50 Identities=22% Similarity=0.252 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAE 146 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~ 146 (163)
.+|||+||--|.++.++ +.|-|||--|+..||.+||+||+++||+-+...
T Consensus 35 R~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~ 97 (117)
T KOG4214|consen 35 RTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHA 97 (117)
T ss_pred cccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeC
Confidence 46999999999998887 679999999999999999999999999876433
No 26
>KOG0512|consensus
Probab=98.56 E-value=1.3e-07 Score=77.20 Aligned_cols=51 Identities=18% Similarity=0.125 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
+..||||-||++|+++.++ ..||||||-|+.-.+.+|+-+|+++||+.+..
T Consensus 96 D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~ 159 (228)
T KOG0512|consen 96 DEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQ 159 (228)
T ss_pred ccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccc
Confidence 4558999999999999999 68999999999999999999999999998753
No 27
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.55 E-value=2.5e-07 Score=81.37 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=60.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ +.-+..+...|... ..|+... +....||||+|+..|+.+.++ .
T Consensus 120 ~~~~g~T~Lh~A~-----~~~~~~~v~~Ll~~--gad~n~~----d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~ 188 (434)
T PHA02874 120 KDAELKTFLHYAI-----KKGDLESIKMLFEY--GADVNIE----DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDN 188 (434)
T ss_pred CCCCCccHHHHHH-----HCCCHHHHHHHHhC--CCCCCCc----CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 5667777666555 33344445444442 3333322 123447999999999999988 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||||+|+..|+.++|++|+++|++..
T Consensus 189 ~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~ 217 (434)
T PHA02874 189 NGESPLHNAAEYGDYACIKLLIDHGNHIM 217 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence 78999999999999999999999998754
No 28
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.52 E-value=2.6e-07 Score=81.23 Aligned_cols=86 Identities=21% Similarity=0.084 Sum_probs=55.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------- 113 (163)
.|..|+++.-.++ +.-++.+...|......++.+.. ...||||+|+..|+.+.++
T Consensus 153 ~d~~g~tpLh~A~-----~~~~~~iv~~Ll~~g~~~n~~~~------~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~ 221 (434)
T PHA02874 153 EDDNGCYPIHIAI-----KHNFFDIIKLLLEKGAYANVKDN------NGESPLHNAAEYGDYACIKLLIDHGNHIMNKCK 221 (434)
T ss_pred cCCCCCCHHHHHH-----HCCcHHHHHHHHHCCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCC
Confidence 5677888766655 33344444444432222222221 2335777777777777766
Q ss_pred ------------------------------ccCCcHHHHHHHcC-CHHHHHHHHhCCCCCCC
Q psy5714 114 ------------------------------RWGKTPLDEAKTFK-RDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 ------------------------------r~G~TPLh~Aa~~G-h~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..+ +.+++++|+++|++...
T Consensus 222 ~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~ 283 (434)
T PHA02874 222 NGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISI 283 (434)
T ss_pred CCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCC
Confidence 36899999999876 88999999999998753
No 29
>PHA02741 hypothetical protein; Provisional
Probab=98.49 E-value=4.4e-07 Score=70.59 Aligned_cols=48 Identities=13% Similarity=0.033 Sum_probs=39.7
Q ss_pred hHHHHHHHHHcCCh----hhhh-------------c-cCCcHHHHHHHcCCHHHHHHHHh-CCCCCC
Q psy5714 96 SIVTLLFNAAAGNI----SALR-------------R-WGKTPLDEAKTFKRDRIIQILEG-SLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl----~~vk-------------r-~G~TPLh~Aa~~Gh~~vV~lLl~-~GA~~~ 143 (163)
..|+||+|+..|+. +.++ . .|+||||+|+..++.++|++|++ .|++..
T Consensus 60 g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~ 126 (169)
T PHA02741 60 GQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH 126 (169)
T ss_pred CCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 34799999999984 5444 2 79999999999999999999997 588765
No 30
>KOG0195|consensus
Probab=98.46 E-value=1.9e-07 Score=81.30 Aligned_cols=83 Identities=20% Similarity=0.147 Sum_probs=63.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------cc
Q psy5714 49 DALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RW 115 (163)
Q Consensus 49 D~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~ 115 (163)
|.+|-|.+--+. ++-.-.+.+.|+..+..++..+...+ |+||+||.+|+-+.|. ..
T Consensus 31 ddhgfsplhwaa-----kegh~aivemll~rgarvn~tnmgdd------tplhlaaahghrdivqkll~~kadvnavneh 99 (448)
T KOG0195|consen 31 DDHGFSPLHWAA-----KEGHVAIVEMLLSRGARVNSTNMGDD------TPLHLAAAHGHRDIVQKLLSRKADVNAVNEH 99 (448)
T ss_pred cccCcchhhhhh-----hcccHHHHHHHHhcccccccccCCCC------cchhhhhhcccHHHHHHHHHHhcccchhhcc
Confidence 466777654444 44444455555555567777776555 6999999999998887 57
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
|+|||||||.-|...|.+-|+..||..
T Consensus 100 gntplhyacfwgydqiaedli~~ga~v 126 (448)
T KOG0195|consen 100 GNTPLHYACFWGYDQIAEDLISCGAAV 126 (448)
T ss_pred CCCchhhhhhhcHHHHHHHHHhcccee
Confidence 999999999999999999999999965
No 31
>KOG4177|consensus
Probab=98.46 E-value=2.5e-07 Score=91.25 Aligned_cols=74 Identities=20% Similarity=0.215 Sum_probs=55.8
Q ss_pred HhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHH
Q psy5714 66 KTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRII 132 (163)
Q Consensus 66 ~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV 132 (163)
++.-..+...++.....+|-+.. ...||||+|+..|+++.|+ ..|+||||-|+..||.+|+
T Consensus 516 ~~~~v~~~~~l~~~ga~v~~~~~------r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~ 589 (1143)
T KOG4177|consen 516 DEDTVKVAKILLEHGANVDLRTG------RGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIA 589 (1143)
T ss_pred hhhhHHHHHHHhhcCCceehhcc------cccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHH
Confidence 33333344444433334444444 3448999999999999999 6899999999999999999
Q ss_pred HHHHhCCCCCCCC
Q psy5714 133 QILEGSLSSTSSA 145 (163)
Q Consensus 133 ~lLl~~GA~~~~~ 145 (163)
++|+++||..+..
T Consensus 590 ~LLlk~GA~vna~ 602 (1143)
T KOG4177|consen 590 ELLLKHGASVNAA 602 (1143)
T ss_pred HHHHHcCCCCCcc
Confidence 9999999998753
No 32
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.45 E-value=5.6e-07 Score=80.17 Aligned_cols=48 Identities=19% Similarity=0.202 Sum_probs=33.9
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHc-CCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTF-KRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~-Gh~~vV~lLl~~GA~~~ 143 (163)
..||||+|+..|+.+.++ ..|+||||+|+.. ++.+++++|+++|++..
T Consensus 201 g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn 262 (477)
T PHA02878 201 NNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN 262 (477)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 346777777777777777 4677777777754 57777777777777654
No 33
>PHA02741 hypothetical protein; Provisional
Probab=98.44 E-value=5.3e-07 Score=70.14 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=42.7
Q ss_pred hHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
..||||+|+..++.+.++ ..|+||||+|+..|+.+++++|+++++..
T Consensus 98 g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 98 GDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 447999999999999988 47999999999999999999999988763
No 34
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.44 E-value=5.9e-07 Score=79.07 Aligned_cols=88 Identities=16% Similarity=0.093 Sum_probs=58.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcC--Chhhhh------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAG--NISALR------------ 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~G--dl~~vk------------ 113 (163)
.|..|+++.-.++. .+.-+..++..|... ..|+... .....|+||+|+..| +.+.++
T Consensus 102 ~d~~g~tpL~~A~~---~~~~~~~iv~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~ 172 (480)
T PHA03100 102 PDNNGITPLLYAIS---KKSNSYSIVEYLLDN--GANVNIK----NSDGENLLHLYLESNKIDLKILKLLIDKGVDINAK 172 (480)
T ss_pred CCCCCCchhhHHHh---cccChHHHHHHHHHc--CCCCCcc----CCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc
Confidence 56667776666652 011233344334432 2233221 123447999999999 888888
Q ss_pred -ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 -RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 -r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
++|+||||+|+..|+.++|++|+++|++...
T Consensus 173 d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~ 204 (480)
T PHA03100 173 NRYGYTPLHIAVEKGNIDVIKFLLDNGADINA 204 (480)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccC
Confidence 5799999999999999999999999988763
No 35
>PHA02795 ankyrin-like protein; Provisional
Probab=98.43 E-value=3.6e-07 Score=82.59 Aligned_cols=72 Identities=21% Similarity=0.068 Sum_probs=54.8
Q ss_pred CCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcC--------
Q psy5714 69 NFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFK-------- 127 (163)
Q Consensus 69 ~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~G-------- 127 (163)
.+.+.+.|...+.+++-+.. .+.||||+|+..|+.+.++ ..|+||||+|+..|
T Consensus 200 ~~eIve~LIs~GADIN~kD~------~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~ 273 (437)
T PHA02795 200 VLEIYKLCIPYIEDINQLDA------GGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRET 273 (437)
T ss_pred HHHHHHHHHhCcCCcCcCCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCccccccc
Confidence 34455555543344444333 3447999999999999998 67999999999998
Q ss_pred CHHHHHHHHhCCCCCCCCC
Q psy5714 128 RDRIIQILEGSLSSTSSAE 146 (163)
Q Consensus 128 h~~vV~lLl~~GA~~~~~~ 146 (163)
|.++|++|+++|++.....
T Consensus 274 ~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 274 HLKILEILLREPLSIDCIK 292 (437)
T ss_pred HHHHHHHHHhCCCCCCchh
Confidence 5799999999999887644
No 36
>PHA03095 ankyrin-like protein; Provisional
Probab=98.42 E-value=6.5e-07 Score=78.49 Aligned_cols=89 Identities=11% Similarity=0.094 Sum_probs=59.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcC-Chhhhh-------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAG-NISALR------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~G-dl~~vk------------- 113 (163)
.|..|+++.-.++... ..-...+...|+..+.+++.+.. ...||||+|+..| +.+.++
T Consensus 43 ~~~~g~t~Lh~a~~~~--~~~~~~iv~~Ll~~Gadin~~~~------~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~ 114 (471)
T PHA03095 43 RGEYGKTPLHLYLHYS--SEKVKDIVRLLLEAGADVNAPER------CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD 114 (471)
T ss_pred CCCCCCCHHHHHHHhc--CCChHHHHHHHHHCCCCCCCCCC------CCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence 4667777776655221 00133344444443334444333 3447999999999 488887
Q ss_pred ccCCcHHHHHH--HcCCHHHHHHHHhCCCCCCC
Q psy5714 114 RWGKTPLDEAK--TFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 r~G~TPLh~Aa--~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+ ..++.+++++|+++|++...
T Consensus 115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~ 147 (471)
T PHA03095 115 KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA 147 (471)
T ss_pred CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc
Confidence 46999999999 66789999999999998754
No 37
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.41 E-value=8.8e-07 Score=76.48 Aligned_cols=50 Identities=16% Similarity=0.064 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...||||+|+..|+.+.++ .+|+||||.|+..|+.+++++|+++||+...
T Consensus 69 ~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~ 132 (300)
T PHA02884 69 SKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINI 132 (300)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 4568999999999999999 2699999999999999999999999998864
No 38
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.40 E-value=3.9e-07 Score=71.07 Aligned_cols=50 Identities=16% Similarity=-0.033 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHcCChhhh---h--------------ccCCcHHHHHHHcCCHHHHHHHHh-CCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISAL---R--------------RWGKTPLDEAKTFKRDRIIQILEG-SLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~v---k--------------r~G~TPLh~Aa~~Gh~~vV~lLl~-~GA~~~~ 144 (163)
...|+||+||..|..+.+ + ..|+||||+|+..|+.+++++|++ .|++...
T Consensus 56 ~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 123 (166)
T PHA02743 56 HGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA 123 (166)
T ss_pred CCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC
Confidence 345899999999987653 3 269999999999999999999995 7988753
No 39
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.38 E-value=8.2e-07 Score=82.51 Aligned_cols=47 Identities=19% Similarity=0.192 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCh-hhhh-------------ccCCcHHHHHHHcC-CHHHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNI-SALR-------------RWGKTPLDEAKTFK-RDRIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl-~~vk-------------r~G~TPLh~Aa~~G-h~~vV~lLl~~GA~~~~ 144 (163)
|+||+|+..++. ..++ .+|+||||+|+..| +.+||++|+++||+...
T Consensus 410 T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~ 471 (682)
T PHA02876 410 TALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA 471 (682)
T ss_pred chHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC
Confidence 677777765553 2233 68999999999876 78999999999998764
No 40
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.37 E-value=6.4e-07 Score=79.78 Aligned_cols=49 Identities=18% Similarity=0.217 Sum_probs=45.2
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..||||+||..|+.+.++ ..|+||||.|+..|+.++|++|+++|++...
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~ 229 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA 229 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 458999999999999998 5799999999999999999999999998753
No 41
>PHA03095 ankyrin-like protein; Provisional
Probab=98.35 E-value=1.7e-06 Score=75.80 Aligned_cols=87 Identities=20% Similarity=0.121 Sum_probs=47.4
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChh--hhh------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNIS--ALR------------ 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~--~vk------------ 113 (163)
.|..|+++.-.++.. ..-...+...+.. ...||..... ...||||+||..|+.. .++
T Consensus 183 ~d~~g~t~Lh~~~~~---~~~~~~i~~~Ll~--~g~~~~~~d~----~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~ 253 (471)
T PHA03095 183 VDDRFRSLLHHHLQS---FKPRARIVRELIR--AGCDPAATDM----LGNTPLHSMATGSSCKRSLVLPLLIAGISINAR 253 (471)
T ss_pred cCCCCCCHHHHHHHH---CCCcHHHHHHHHH--cCCCCcccCC----CCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCc
Confidence 377788776554411 0112223333332 3344443321 2335777777776542 111
Q ss_pred -ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 114 -RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 114 -r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..|+||||+|+..|+.++|++|+++||+..
T Consensus 254 d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n 284 (471)
T PHA03095 254 NRYGQTPLHYAAVFNNPRACRRLIALGADIN 284 (471)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 467777777777777777777777777664
No 42
>KOG4412|consensus
Probab=98.34 E-value=6.1e-07 Score=73.54 Aligned_cols=47 Identities=21% Similarity=0.346 Sum_probs=29.6
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
..|+||+||.+|.+|... ..|.||||-|+.-|.+++++||+..||..
T Consensus 106 G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~ 165 (226)
T KOG4412|consen 106 GQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPL 165 (226)
T ss_pred CcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCC
Confidence 346777777777766665 45666666666666666666666666543
No 43
>KOG4214|consensus
Probab=98.34 E-value=4.6e-07 Score=67.40 Aligned_cols=48 Identities=21% Similarity=0.372 Sum_probs=44.4
Q ss_pred HHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy5714 99 TLLFNAAAGNISALR------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAE 146 (163)
Q Consensus 99 ~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~ 146 (163)
..+|+.++|+++.|+ ..||||||||+.+|++++.+||+..||++.+..
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kD 64 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKD 64 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCcc
Confidence 679999999999999 679999999999999999999999999998643
No 44
>KOG0515|consensus
Probab=98.33 E-value=6.5e-07 Score=82.63 Aligned_cols=50 Identities=22% Similarity=0.154 Sum_probs=43.5
Q ss_pred cchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 93 IGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 93 ~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
+...+|+||-|.+.||.+.|+ .+||||||+|+.+.+.-|++.|.++||-+
T Consensus 580 NdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Gaav 642 (752)
T KOG0515|consen 580 NDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAV 642 (752)
T ss_pred CccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceE
Confidence 335788999999999999998 68999999999999999999999998854
No 45
>KOG0502|consensus
Probab=98.31 E-value=3.1e-07 Score=77.34 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHcCChhhhh----------------------------------------------ccCCcHHHHHHHcCC
Q psy5714 95 LSIVTLLFNAAAGNISALR----------------------------------------------RWGKTPLDEAKTFKR 128 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk----------------------------------------------r~G~TPLh~Aa~~Gh 128 (163)
...|||+|||.+|++..|+ -+|-|||-||++.+|
T Consensus 159 ~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnh 238 (296)
T KOG0502|consen 159 FGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNH 238 (296)
T ss_pred cCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCCh
Confidence 4568999999999999999 258999999999999
Q ss_pred HHHHHHHHhCCCCCCC
Q psy5714 129 DRIIQILEGSLSSTSS 144 (163)
Q Consensus 129 ~~vV~lLl~~GA~~~~ 144 (163)
.+||+.|++.||+.+-
T Consensus 239 vkcve~Ll~sGAd~t~ 254 (296)
T KOG0502|consen 239 VKCVESLLNSGADVTQ 254 (296)
T ss_pred HHHHHHHHhcCCCccc
Confidence 9999999999999885
No 46
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.28 E-value=1.2e-06 Score=70.72 Aligned_cols=51 Identities=22% Similarity=0.210 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHcC--Chhhhh--------------ccCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCC
Q psy5714 95 LSIVTLLFNAAAG--NISALR--------------RWGKTPLDEAKTF---KRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 95 ~~~~~L~~AA~~G--dl~~vk--------------r~G~TPLh~Aa~~---Gh~~vV~lLl~~GA~~~~~ 145 (163)
...||||+|+..+ +++.++ .+|+||||+|+.. ++.+++++|+++|+++...
T Consensus 50 ~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~ 119 (209)
T PHA02859 50 LYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEE 119 (209)
T ss_pred cCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc
Confidence 3456888887754 677777 2578888887653 4688888888888887653
No 47
>KOG0514|consensus
Probab=98.27 E-value=1.1e-06 Score=78.03 Aligned_cols=86 Identities=13% Similarity=0.156 Sum_probs=68.6
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 47 PLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 47 ~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
..+..|.+.-+++.|-.|-......+-..|+.. .+++.+-. + ..-|+||+|..+|.++.|+
T Consensus 297 ~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gnVNaKAs--Q---~gQTALMLAVSHGr~d~vk~LLacgAdVNiQD 370 (452)
T KOG0514|consen 297 QQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-GDVNAKAS--Q---HGQTALMLAVSHGRVDMVKALLACGADVNIQD 370 (452)
T ss_pred ccccccccHHHHHHHHhhcchhhHHHHHHHHhc-cCcchhhh--h---hcchhhhhhhhcCcHHHHHHHHHccCCCcccc
Confidence 366889999999999888887777777666654 33333222 2 2347999999999999999
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
.+|.|+|+.|+..||.|||++|+..
T Consensus 371 dDGSTALMCA~EHGhkEivklLLA~ 395 (452)
T KOG0514|consen 371 DDGSTALMCAAEHGHKEIVKLLLAV 395 (452)
T ss_pred CCccHHHhhhhhhChHHHHHHHhcc
Confidence 6899999999999999999999974
No 48
>PHA02946 ankyin-like protein; Provisional
Probab=98.25 E-value=1.1e-06 Score=78.83 Aligned_cols=48 Identities=13% Similarity=0.071 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCChhhhh------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.||||+||.+|+.+.++ ..|+||||+|+..|+.++|++|+.+||+...
T Consensus 298 ~TpLh~Aa~~g~~eivk~Ll~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~ 351 (446)
T PHA02946 298 STDFKMAVEVGSIRCVKYLLDNDIICEDAMYYAVLSEYETMVDYLLFNHFSVDS 351 (446)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCccccHHHHHHHhCHHHHHHHHHHCCCCCCC
Confidence 48999999999999999 6789999999999999999999999999774
No 49
>PHA02798 ankyrin-like protein; Provisional
Probab=98.25 E-value=3.3e-06 Score=75.72 Aligned_cols=91 Identities=15% Similarity=0.015 Sum_probs=58.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcC---Chhhhh-----------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAG---NISALR----------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~G---dl~~vk----------- 113 (163)
.|..|.+..-..+...-...-...+...|...+.+++.... ...||||+|+..+ +.+.++
T Consensus 67 ~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~------~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~ 140 (489)
T PHA02798 67 LDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNS------DGETPLYCLLSNGYINNLEILLFMIENGADTTL 140 (489)
T ss_pred CCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCC------CcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc
Confidence 56788887755432100000112333344432233333222 3458999999986 566666
Q ss_pred --ccCCcHHHHHHHcCC---HHHHHHHHhCCCCCCC
Q psy5714 114 --RWGKTPLDEAKTFKR---DRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 --r~G~TPLh~Aa~~Gh---~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|++.|+ .+++++|+++|++...
T Consensus 141 ~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~ 176 (489)
T PHA02798 141 LDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT 176 (489)
T ss_pred cCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc
Confidence 579999999999998 9999999999998753
No 50
>PHA02946 ankyin-like protein; Provisional
Probab=98.24 E-value=1.9e-06 Score=77.25 Aligned_cols=50 Identities=16% Similarity=0.016 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCC--HHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKR--DRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh--~~vV~lLl~~GA~~~~ 144 (163)
...||||+||..|+.+.++ +.|+||||+|+..++ .+++++|+++||+...
T Consensus 71 ~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~ 135 (446)
T PHA02946 71 DGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINN 135 (446)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccc
Confidence 4568999999999999998 689999999988764 8999999999998764
No 51
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.23 E-value=6.6e-07 Score=68.02 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHcCChhh---hh-------------c-cCCcHHHHHHHcCCHHHHHHHHh-CCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISA---LR-------------R-WGKTPLDEAKTFKRDRIIQILEG-SLSSTS 143 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~---vk-------------r-~G~TPLh~Aa~~Gh~~vV~lLl~-~GA~~~ 143 (163)
...|+||+|+..|+++. ++ + .|+||||+|+..|+.+++++|++ .|++..
T Consensus 54 ~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n 120 (154)
T PHA02736 54 HGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME 120 (154)
T ss_pred CCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc
Confidence 45579999999998764 33 2 69999999999999999999998 488764
No 52
>KOG0510|consensus
Probab=98.22 E-value=3e-06 Score=81.12 Aligned_cols=51 Identities=25% Similarity=0.241 Sum_probs=46.7
Q ss_pred hHHHHHHHHHcCChhhhh----------------------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR----------------------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAE 146 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk----------------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~ 146 (163)
..+|||.|+..||++.++ ++|.||||+|++.|+.++|+.|+.+||+++..+
T Consensus 225 ~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn 303 (929)
T KOG0510|consen 225 KATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKN 303 (929)
T ss_pred CCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccC
Confidence 457999999999999998 689999999999999999999999999987554
No 53
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.19 E-value=3.9e-06 Score=78.92 Aligned_cols=44 Identities=27% Similarity=0.376 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
...|+||+||.+|+.+.++ ..|+||||+|+..|+.++|++|+++
T Consensus 114 ~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 114 DGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170 (664)
T ss_pred CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence 3458999999999999998 5899999999999999999999998
No 54
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.17 E-value=3.8e-06 Score=80.33 Aligned_cols=41 Identities=27% Similarity=0.239 Sum_probs=21.5
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHh
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEG 137 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~ 137 (163)
.||||+||.+|+.+.++ .+|+||||+|+..||.+++++|++
T Consensus 559 ~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~ 612 (823)
T PLN03192 559 RTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYH 612 (823)
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 34556666555555555 345555555555555444444443
No 55
>PHA02730 ankyrin-like protein; Provisional
Probab=98.16 E-value=2.7e-06 Score=80.55 Aligned_cols=47 Identities=26% Similarity=0.299 Sum_probs=41.5
Q ss_pred hHHHHHHHHHcC---Chhhhh-------------ccCCcHHHHHHHcC--CHHHHHHHHhCCCCC
Q psy5714 96 SIVTLLFNAAAG---NISALR-------------RWGKTPLDEAKTFK--RDRIIQILEGSLSST 142 (163)
Q Consensus 96 ~~~~L~~AA~~G---dl~~vk-------------r~G~TPLh~Aa~~G--h~~vV~lLl~~GA~~ 142 (163)
+.||||+|+.+| +.|.++ ..|+||||+|+..+ +.|||++|+++|+..
T Consensus 41 G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~ 105 (672)
T PHA02730 41 GNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNA 105 (672)
T ss_pred CCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCC
Confidence 458999999997 489999 67999999999977 799999999998755
No 56
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.13 E-value=8.6e-06 Score=65.76 Aligned_cols=47 Identities=11% Similarity=-0.017 Sum_probs=30.0
Q ss_pred HHHHHHHHH--cCChhhhh-------------ccCCcHHHH-HHHcCCHHHHHHHHhCCCCCC
Q psy5714 97 IVTLLFNAA--AGNISALR-------------RWGKTPLDE-AKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 97 ~~~L~~AA~--~Gdl~~vk-------------r~G~TPLh~-Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.||||+|+. .++++.++ ..|+||||. |+..++.++|++|+++|+++.
T Consensus 124 ~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~ 186 (209)
T PHA02859 124 KNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDIN 186 (209)
T ss_pred CCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 357776654 35666666 356777774 455667777777777777655
No 57
>PHA02798 ankyrin-like protein; Provisional
Probab=98.12 E-value=6.9e-06 Score=73.64 Aligned_cols=49 Identities=16% Similarity=0.151 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.+.||||+|+..|+.+.++ ..|+||||.|+..++.++++.|++++++..
T Consensus 257 ~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 257 LGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence 3558999999999999999 689999999999999999999999998775
No 58
>KOG0508|consensus
Probab=98.11 E-value=9.2e-07 Score=80.79 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=28.0
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
|-||+||++|+.+.++ ..|+|+||+++..||.|||++|+++|+.+
T Consensus 152 TcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i 209 (615)
T KOG0508|consen 152 TCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKI 209 (615)
T ss_pred eeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCcee
Confidence 4555555555555555 34677777777777777777777766654
No 59
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.10 E-value=5.4e-06 Score=71.62 Aligned_cols=48 Identities=13% Similarity=-0.012 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCChhhhh-----------c------cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-----------R------WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-----------r------~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.++|++|+..|+.+.++ + .|.||||+|+..++.+++++|+++||+...
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~ 98 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR 98 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc
Confidence 46899999999999999 2 699999999999999999999999998874
No 60
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.09 E-value=2.2e-06 Score=55.89 Aligned_cols=29 Identities=31% Similarity=0.407 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHH
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEA 123 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~A 123 (163)
...||||+||..|+.+.++ ..|+||||+|
T Consensus 15 ~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 15 YGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 4558999999999999999 6899999998
No 61
>KOG0195|consensus
Probab=98.09 E-value=3.1e-06 Score=73.83 Aligned_cols=57 Identities=21% Similarity=0.272 Sum_probs=47.9
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCchhhhhcCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAEDSEDESLQLP 156 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~~~~~~~~~p 156 (163)
...+|||||.+|+...++ +-.-||||.|+..||.+||+.|+++.|+.+. ...+.++|
T Consensus 34 gfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna----vnehgntp 103 (448)
T KOG0195|consen 34 GFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA----VNEHGNTP 103 (448)
T ss_pred CcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch----hhccCCCc
Confidence 457999999999999988 3457999999999999999999999998874 44445444
No 62
>KOG0502|consensus
Probab=98.09 E-value=4.4e-06 Score=70.48 Aligned_cols=64 Identities=14% Similarity=0.098 Sum_probs=53.2
Q ss_pred ccCCCCCCcccccchhHHHHHHHHHcCChhhhh-----------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 81 NKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-----------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 81 ~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-----------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..++.+.+..|...-..++++|+...-+++.+. ..|-|||.||+.+||..+|+||++.||+...
T Consensus 114 ttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~ 188 (296)
T KOG0502|consen 114 TTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA 188 (296)
T ss_pred eeecccccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh
Confidence 446666666666655667999999998888776 6899999999999999999999999998754
No 63
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.09 E-value=5.8e-06 Score=74.21 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSS 141 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~ 141 (163)
.+.||||+||..|+.+.++ ..|+||||+|+..|+.++|++|++.+..
T Consensus 255 ~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 255 KGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 3568999999999999888 5799999999999999999999987643
No 64
>KOG0515|consensus
Probab=98.08 E-value=4.5e-06 Score=77.21 Aligned_cols=63 Identities=19% Similarity=0.114 Sum_probs=51.3
Q ss_pred CCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy5714 84 DPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAE 146 (163)
Q Consensus 84 dpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~ 146 (163)
.+|...+..+-+-+..|+-||-+|.+|.|+ ..|-|+||.|++.||.+||+||+++|++.+...
T Consensus 538 ser~a~GRvrfnPLaLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~D 613 (752)
T KOG0515|consen 538 SERMAHGRVRFNPLALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAAD 613 (752)
T ss_pred CccccccceecchHHHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCcc
Confidence 344444444444556788899999999999 579999999999999999999999999998643
No 65
>KOG0508|consensus
Probab=98.04 E-value=2.8e-06 Score=77.71 Aligned_cols=50 Identities=20% Similarity=0.090 Sum_probs=45.3
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAED 147 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~ 147 (163)
|||..||+.|++|.|| |.|+|-||.|+..||.+|++||++.||+.....-
T Consensus 119 tPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~ 181 (615)
T KOG0508|consen 119 TPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSY 181 (615)
T ss_pred ccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcc
Confidence 6999999999999999 7899999999999999999999999999876543
No 66
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.03 E-value=4e-06 Score=53.69 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=26.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
|+||||+|+..|+.+++++|+++|+++...
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~ 30 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQ 30 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCC
Confidence 799999999999999999999999987764
No 67
>KOG0509|consensus
Probab=98.01 E-value=6.9e-06 Score=76.52 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=37.9
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.-|||||||.+|++.+|+ ..|-||||.|+++||.-+|-||+.+|++..
T Consensus 112 ~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d 172 (600)
T KOG0509|consen 112 GSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADID 172 (600)
T ss_pred CCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCC
Confidence 447999999999999998 467777777777777777777777776554
No 68
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.00 E-value=2.1e-05 Score=73.13 Aligned_cols=48 Identities=19% Similarity=0.144 Sum_probs=35.8
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..||||+||..|+.+.|+ ..|.||||+|+..||.+++++|+++++...
T Consensus 178 G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~ 238 (682)
T PHA02876 178 CITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNIN 238 (682)
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 346888888888888877 357788888888888888877777665543
No 69
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.00 E-value=9.9e-06 Score=76.19 Aligned_cols=47 Identities=26% Similarity=0.225 Sum_probs=43.4
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+.||.||..|+++.++ ..|+||||+|+..||.++|++|+++|++...
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~ 143 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL 143 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 4799999999999998 5799999999999999999999999998753
No 70
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=97.99 E-value=1.1e-05 Score=61.17 Aligned_cols=50 Identities=26% Similarity=0.239 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHcCC-----hhhhh----------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGN-----ISALR----------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gd-----l~~vk----------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...|+||+|+..|+ .+.++ ..|+||||+|+..|+.+++++|++.|+....
T Consensus 105 ~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~ 175 (235)
T COG0666 105 DGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS 175 (235)
T ss_pred CCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcc
Confidence 45589999999999 77777 4699999999999999999999999987654
No 71
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=97.98 E-value=2e-05 Score=75.60 Aligned_cols=42 Identities=21% Similarity=0.105 Sum_probs=35.0
Q ss_pred HHHcCChhhhh-------------ccCCcHHHHHHH--cCCHHHHHHHHhCCCCCCC
Q psy5714 103 NAAAGNISALR-------------RWGKTPLDEAKT--FKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 103 AA~~Gdl~~vk-------------r~G~TPLh~Aa~--~Gh~~vV~lLl~~GA~~~~ 144 (163)
||..|+++.++ ..|+||||+|+. .++.++|++|+++||+...
T Consensus 291 AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~ 347 (764)
T PHA02716 291 LARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE 347 (764)
T ss_pred HHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc
Confidence 56678888887 579999999864 5789999999999998753
No 72
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=97.97 E-value=7.4e-06 Score=78.58 Aligned_cols=53 Identities=13% Similarity=0.061 Sum_probs=45.0
Q ss_pred chhHHHHHHHHHcCChhhh-----h-------------ccCCcHHHHHHHcCCH-----HHHHHHHhCCCCCCCCC
Q psy5714 94 GLSIVTLLFNAAAGNISAL-----R-------------RWGKTPLDEAKTFKRD-----RIIQILEGSLSSTSSAE 146 (163)
Q Consensus 94 ~~~~~~L~~AA~~Gdl~~v-----k-------------r~G~TPLh~Aa~~Gh~-----~vV~lLl~~GA~~~~~~ 146 (163)
..+.||||+||..|+.+.+ + ..|+||||+|++.||. +||++|+++|++.....
T Consensus 495 ~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~~ 570 (764)
T PHA02716 495 TSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIVI 570 (764)
T ss_pred CCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchHH
Confidence 3467899999999987544 5 7899999999999987 99999999999877543
No 73
>PHA02989 ankyrin repeat protein; Provisional
Probab=97.96 E-value=1.6e-05 Score=71.40 Aligned_cols=33 Identities=12% Similarity=-0.018 Sum_probs=29.7
Q ss_pred hhccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 112 LRRWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 112 vkr~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...+|+||||+|+..|+.++|++|+++||+...
T Consensus 252 ~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~ 284 (494)
T PHA02989 252 KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYN 284 (494)
T ss_pred CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccc
Confidence 337899999999999999999999999998754
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.96 E-value=7.1e-05 Score=51.97 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=57.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|.+..-.+. +.-+...++.+.......+.+.. ...++|+.|+..++.+.++ .
T Consensus 3 ~~~~g~t~l~~a~-----~~~~~~~i~~li~~~~~~~~~~~------~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 71 (126)
T cd00204 3 RDEDGRTPLHLAA-----SNGHLEVVKLLLENGADVNAKDN------DGRTPLHLAAKNGHLEIVKLLLEKGADVNARDK 71 (126)
T ss_pred cCcCCCCHHHHHH-----HcCcHHHHHHHHHcCCCCCccCC------CCCcHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 3556776666655 33344455555432111112222 2337999999999998877 4
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|.||+|+|+..++.+++++|++++....
T Consensus 72 ~~~~~l~~a~~~~~~~~~~~L~~~~~~~~ 100 (126)
T cd00204 72 DGNTPLHLAARNGNLDVVKLLLKHGADVN 100 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 68999999999999999999999885544
No 75
>PHA02795 ankyrin-like protein; Provisional
Probab=97.94 E-value=1.1e-05 Score=73.09 Aligned_cols=49 Identities=10% Similarity=-0.004 Sum_probs=43.3
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..+++|+|+..++++.++ ..|+||||+|+..||.++|++|+++||+...
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~ 249 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA 249 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 346888888888888888 5799999999999999999999999998864
No 76
>KOG0512|consensus
Probab=97.94 E-value=1.2e-05 Score=65.74 Aligned_cols=46 Identities=22% Similarity=0.171 Sum_probs=42.6
Q ss_pred HHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 99 TLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 99 ~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.++|||..+.+..|+ .+|+||||-|+.+||.+||+.|+..||+...
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a 125 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA 125 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc
Confidence 789999999999999 5899999999999999999999999998753
No 77
>KOG1710|consensus
Probab=97.93 E-value=1e-05 Score=70.52 Aligned_cols=50 Identities=18% Similarity=0.087 Sum_probs=45.9
Q ss_pred chhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 94 GLSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 94 ~~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
...|++|+.||++|+++.++ ..++||||.|+-.|+.+|.++|++.||+..
T Consensus 43 ~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~ 106 (396)
T KOG1710|consen 43 PSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMY 106 (396)
T ss_pred CCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccc
Confidence 35788999999999999999 468999999999999999999999999875
No 78
>KOG0505|consensus
Probab=97.90 E-value=6.3e-06 Score=75.60 Aligned_cols=51 Identities=18% Similarity=0.101 Sum_probs=46.9
Q ss_pred cchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 93 IGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 93 ~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+.+..|+||-++...|.++|+ ..||||||.|+.+||.+|+++|+.+||++.
T Consensus 70 n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~ 133 (527)
T KOG0505|consen 70 NVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLL 133 (527)
T ss_pred CCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhh
Confidence 346779999999999999999 579999999999999999999999999875
No 79
>KOG0507|consensus
Probab=97.86 E-value=6.1e-06 Score=78.56 Aligned_cols=83 Identities=17% Similarity=0.055 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHH
Q psy5714 56 RGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDE 122 (163)
Q Consensus 56 ~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~ 122 (163)
.|..++++.+=+-+.++...|.....-+|-- ....+++||+||.+||.|.+| -.|.||||.
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~------d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhl 121 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLC------DTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHL 121 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhh------hccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccch
Confidence 5555666655555555543332211111111 134567999999999999999 479999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCC
Q psy5714 123 AKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 123 Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
|++.||.++|++|+++|++.-.
T Consensus 122 aaqhgh~dvv~~Ll~~~adp~i 143 (854)
T KOG0507|consen 122 AAQHGHLEVVFYLLKKNADPFI 143 (854)
T ss_pred hhhhcchHHHHHHHhcCCCccc
Confidence 9999999999999999998753
No 80
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.83 E-value=1.9e-05 Score=74.28 Aligned_cols=49 Identities=20% Similarity=0.311 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHcCChhhhh---------------------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR---------------------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk---------------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
...||||+||.+|+.+.|+ +.|+||||.|+..|+.+++++|+++||+..
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin 202 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL 202 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchh
Confidence 4678999999999999999 148999999999999999999999998765
No 81
>KOG0511|consensus
Probab=97.75 E-value=3.9e-05 Score=68.85 Aligned_cols=47 Identities=21% Similarity=0.299 Sum_probs=44.1
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
-.|+.|+..||++.|+ +|.++||-+|+-+||.++|++|+++||-..+
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r 97 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR 97 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc
Confidence 3899999999999999 8999999999999999999999999997764
No 82
>KOG4177|consensus
Probab=97.70 E-value=6.2e-05 Score=74.76 Aligned_cols=90 Identities=16% Similarity=0.065 Sum_probs=68.5
Q ss_pred EeecCCCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------
Q psy5714 42 ALFSPPLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------- 113 (163)
Q Consensus 42 ~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------- 113 (163)
++|--..+..|++.+-++. ..-++.+-+.|+....++..+.+ ...||||.||..|+.+.+.
T Consensus 530 ga~v~~~~~r~~TpLh~A~-----~~g~v~~VkfLLe~gAdv~ak~~------~G~TPLH~Aa~~G~~~i~~LLlk~GA~ 598 (1143)
T KOG4177|consen 530 GANVDLRTGRGYTPLHVAV-----HYGNVDLVKFLLEHGADVNAKDK------LGYTPLHQAAQQGHNDIAELLLKHGAS 598 (1143)
T ss_pred CCceehhcccccchHHHHH-----hcCCchHHHHhhhCCccccccCC------CCCChhhHHHHcChHHHHHHHHHcCCC
Confidence 5555556666677766666 55566666666654444444443 4558999999999999988
Q ss_pred -----ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 114 -----RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 114 -----r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
-||.||||+|++.|+.+++++|+..++..
T Consensus 599 vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 599 VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred CCcccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 69999999999999999999999999984
No 83
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.70 E-value=8e-05 Score=38.69 Aligned_cols=29 Identities=21% Similarity=0.227 Sum_probs=26.0
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||||+|+..++.+++++|++++....
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999988653
No 84
>PHA02917 ankyrin-like protein; Provisional
Probab=97.69 E-value=0.0001 Score=69.57 Aligned_cols=64 Identities=11% Similarity=-0.047 Sum_probs=49.9
Q ss_pred hhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHH-cCCHHHHHHHHhCC
Q psy5714 74 DNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKT-FKRDRIIQILEGSL 139 (163)
Q Consensus 74 d~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~-~Gh~~vV~lLl~~G 139 (163)
+.|.....+++.+.. ...||||+|+..++.+.++ ..|+||||+|+. .++.+++++|+++|
T Consensus 436 ~~Ll~~GAdIN~kd~------~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~g 509 (661)
T PHA02917 436 NICLPYLKDINMIDK------RGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHK 509 (661)
T ss_pred HHHHHCCCCCCCCCC------CCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcC
Confidence 344433344554433 3447999999999999987 689999999996 78999999999999
Q ss_pred CCCC
Q psy5714 140 SSTS 143 (163)
Q Consensus 140 A~~~ 143 (163)
++..
T Consensus 510 a~i~ 513 (661)
T PHA02917 510 PTLD 513 (661)
T ss_pred CChh
Confidence 9875
No 85
>KOG0514|consensus
Probab=97.67 E-value=7.1e-05 Score=66.84 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=57.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------cc
Q psy5714 50 ALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR--------------RW 115 (163)
Q Consensus 50 ~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk--------------r~ 115 (163)
++|.+.++++. ..-....-..|+.+..+++-. +.+.-|+||.||.+|+.|.++ ++
T Consensus 338 Q~gQTALMLAV-----SHGr~d~vk~LLacgAdVNiQ------DdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~D 406 (452)
T KOG0514|consen 338 QHGQTALMLAV-----SHGRVDMVKALLACGADVNIQ------DDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVD 406 (452)
T ss_pred hhcchhhhhhh-----hcCcHHHHHHHHHccCCCccc------cCCccHHHhhhhhhChHHHHHHHhccCcccceeecCC
Confidence 56666666666 333444444555554444433 334558999999999999999 89
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
|.|+|..|...||.||.-+|-.+
T Consensus 407 gSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 407 GSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred CchhhhhHHhcCchHHHHHHHHH
Confidence 99999999999999999988764
No 86
>KOG0505|consensus
Probab=97.63 E-value=3.9e-05 Score=70.53 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=44.6
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.-|+||.||.+|-.++.+ .+||||||.|+.-|+.+++++|+++|+.+.
T Consensus 198 G~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d 258 (527)
T KOG0505|consen 198 GATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMD 258 (527)
T ss_pred cchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccc
Confidence 468999999999999988 589999999999999999999999999875
No 87
>PHA02917 ankyrin-like protein; Provisional
Probab=97.51 E-value=0.00012 Score=69.11 Aligned_cols=46 Identities=7% Similarity=0.075 Sum_probs=39.7
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHH--HHcCCHHHHHHHHhCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEA--KTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~A--a~~Gh~~vV~lLl~~GA~~~ 143 (163)
+++++|+.+|+++.|+ ..|+||||.| +..||.+||++|+++||+..
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 5678888888999888 5899999965 45799999999999999875
No 88
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.51 E-value=0.00022 Score=49.46 Aligned_cols=48 Identities=21% Similarity=0.290 Sum_probs=42.6
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..|+|++|+..|+.+.++ ..|.||||+|+..+..+++++|+++++...
T Consensus 7 g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~ 67 (126)
T cd00204 7 GRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN 67 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 347999999999999887 579999999999999999999999996443
No 89
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=97.48 E-value=0.00029 Score=53.32 Aligned_cols=89 Identities=19% Similarity=0.122 Sum_probs=58.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|.+..-++....--......+.+.++......+..... .....||||+|+..|+.+.++ .
T Consensus 102 ~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~---~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~ 178 (235)
T COG0666 102 KDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR---DEDGNTPLHWAALNGDADIVELLLEAGADPNSRNS 178 (235)
T ss_pred ccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc---CCCCCchhHHHHHcCchHHHHHHHhcCCCCccccc
Confidence 667787777777732200000033444444432200111111 123458999999999999988 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSL 139 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~G 139 (163)
.|+|||++|+..++.+++++|++.+
T Consensus 179 ~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 179 YGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCcchhhhcccchHHHHHHHHhcC
Confidence 8999999999999999999999976
No 90
>PHA02792 ankyrin-like protein; Provisional
Probab=97.47 E-value=0.00022 Score=67.39 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=39.7
Q ss_pred hHHHHHHHHHcCChhh---hh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISA---LR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~---vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..||||+|+...+.+. ++ ..|+||||+|+..++.+++++|+++||+...
T Consensus 374 ~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~ 438 (631)
T PHA02792 374 NIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI 438 (631)
T ss_pred ChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 3579998777665432 22 6799999999999999999999999998764
No 91
>PHA02730 ankyrin-like protein; Provisional
Probab=97.33 E-value=0.00029 Score=66.92 Aligned_cols=48 Identities=15% Similarity=0.227 Sum_probs=36.0
Q ss_pred hHHHHHHHHHcCChhhhh-------------c-cCCcHHHHHHH--cCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------R-WGKTPLDEAKT--FKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r-~G~TPLh~Aa~--~Gh~~vV~lLl~~GA~~~ 143 (163)
..||||+|+..++.+.++ + .|+||||+|+. ++|.+++++|+++|+...
T Consensus 462 G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~ 525 (672)
T PHA02730 462 NKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE 525 (672)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence 346888888888877777 2 37888888876 478888888888887653
No 92
>KOG3676|consensus
Probab=97.29 E-value=0.00033 Score=67.15 Aligned_cols=53 Identities=15% Similarity=0.242 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHcCChhhhh------------------------------------ccCCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 95 LSIVTLLFNAAAGNISALR------------------------------------RWGKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk------------------------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
...|+||+|..+-|.+.|+ .||..||..||+.++.|||++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 3568999999999999999 3899999999999999999999999
Q ss_pred CCCCCCCCC
Q psy5714 139 LSSTSSAED 147 (163)
Q Consensus 139 GA~~~~~~~ 147 (163)
||+++.+..
T Consensus 263 gAd~~aqDS 271 (782)
T KOG3676|consen 263 GADPNAQDS 271 (782)
T ss_pred CCCCCcccc
Confidence 999987554
No 93
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.27 E-value=0.00045 Score=65.14 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=26.0
Q ss_pred HHHHHHHHcCChhhhh---------------ccCCcHHH-HHHHcCCHHHHHHHHhCC
Q psy5714 98 VTLLFNAAAGNISALR---------------RWGKTPLD-EAKTFKRDRIIQILEGSL 139 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk---------------r~G~TPLh-~Aa~~Gh~~vV~lLl~~G 139 (163)
.+++.|+.+||++.++ ..|+|||| .|+..+|.+++++|+++|
T Consensus 19 ~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g 76 (743)
T TIGR00870 19 KAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLS 76 (743)
T ss_pred HHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCC
Confidence 4666666666666655 24666666 566666666666666666
No 94
>KOG0818|consensus
Probab=97.17 E-value=0.00072 Score=62.50 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=55.6
Q ss_pred cchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCC---------CCCCCCCchh
Q psy5714 93 IGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLS---------STSSAEDSED 150 (163)
Q Consensus 93 ~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA---------~~~~~~~~~~ 150 (163)
.....||||.||..|+..-++ +.|.||+++|.+.||.++.+-|++.-- -.++.|+|-.
T Consensus 164 pekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~~y~vtDR~~f~lcgrKpDHkn 243 (669)
T KOG0818|consen 164 PEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKN 243 (669)
T ss_pred cccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 345668999999999988877 789999999999999999998887422 1266777777
Q ss_pred h-hhcCCccccc
Q psy5714 151 E-SLQLPQITSK 161 (163)
Q Consensus 151 ~-~~~~p~~~~~ 161 (163)
. ++-+|+++.+
T Consensus 244 gqhfiIP~~~~s 255 (669)
T KOG0818|consen 244 GQHFIIPQMADS 255 (669)
T ss_pred Ccceeccccccc
Confidence 5 8888988764
No 95
>KOG0705|consensus
Probab=96.98 E-value=0.0011 Score=62.29 Aligned_cols=50 Identities=22% Similarity=0.201 Sum_probs=43.9
Q ss_pred chhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 94 GLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 94 ~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.+..|+||+||..|++...+ ..|+|+|.||.+.|..||+..|+.+|---.
T Consensus 659 ~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred CCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 45578999999999998877 479999999999999999999999986443
No 96
>KOG0520|consensus
Probab=96.97 E-value=0.00095 Score=65.43 Aligned_cols=87 Identities=20% Similarity=0.079 Sum_probs=55.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCC-CCCc--ccccchhHHHHHHHHHcCChhhhh-----------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDP-RKHK--YSSIGLSIVTLLFNAAAGNISALR----------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidp-r~~~--~e~~~~~~~~L~~AA~~Gdl~~vk----------- 113 (163)
.....-..+|..|++.+.+.+ |..|.+. -+++ .+.. .+...+. -+|++| .++++...
T Consensus 565 ~~~~~~~~r~~lllhL~a~~l----yawLie~--~~e~~~~~~~eld~d~qg--V~hfca-~lg~ewA~ll~~~~~~ai~ 635 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELL----YAWLIEK--VIEWAGSGDLELDRDGQG--VIHFCA-ALGYEWAFLPISADGVAID 635 (975)
T ss_pred hccccCCCcchHHHHHHHHHh----HHHHHHH--HhcccccCchhhcccCCC--hhhHhh-hcCCceeEEEEeecccccc
Confidence 344555677777777776664 4455542 2333 1111 2222233 345544 45555433
Q ss_pred ---ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 114 ---RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 114 ---r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..||||||+|+.+||..++.-|++-|++..
T Consensus 636 i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 636 IRDRNGWTPLHWAAFRGREKLVASLIELGADPG 668 (975)
T ss_pred cccCCCCcccchHhhcCHHHHHHHHHHhccccc
Confidence 679999999999999999999999988876
No 97
>KOG2384|consensus
Probab=96.73 E-value=0.0011 Score=54.76 Aligned_cols=41 Identities=15% Similarity=0.086 Sum_probs=23.0
Q ss_pred HHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 98 VTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
|+||.||.+|.-+++. ..|++.+..|.+.|+.++|..|.++
T Consensus 14 Talmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 14 TALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred hHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 5555555555555555 2355555555555555555555554
No 98
>KOG0522|consensus
Probab=96.63 E-value=0.0032 Score=58.35 Aligned_cols=43 Identities=28% Similarity=0.339 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSL 139 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~G 139 (163)
.||||+|+.-||.++++ +.||||||+|+..|+.+++.-++.+-
T Consensus 56 ~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 56 RTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL 111 (560)
T ss_pred CccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence 47999999999999998 68999999999999999888877653
No 99
>PHA02792 ankyrin-like protein; Provisional
Probab=96.62 E-value=0.0032 Score=59.62 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHH----------cCCHHHHHHHHhCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKT----------FKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~----------~Gh~~vV~lLl~~GA~~~ 143 (163)
...||||+|+..++.+.++ ..|+||||+|+. ..+.+++++|+++|....
T Consensus 409 ~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 409 HGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred cCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 3457999999999999998 689999999976 334678999999997654
No 100
>KOG0507|consensus
Probab=96.62 E-value=0.0012 Score=63.39 Aligned_cols=48 Identities=17% Similarity=0.049 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
...|+||.|+.+|+.+.++ ..|.+|||+|++.||.|+|++|+.+++..
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~ 108 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDIL 108 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCC
Confidence 4678999999999999888 57999999999999999999999998544
No 101
>KOG0783|consensus
Probab=96.61 E-value=0.00078 Score=65.51 Aligned_cols=47 Identities=21% Similarity=0.119 Sum_probs=42.9
Q ss_pred hHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
+.++||+|+..|..+.++ ..||||||-|+..||.||+-+|+++|+..
T Consensus 52 GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL 112 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL 112 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce
Confidence 447999999999999988 57999999999999999999999999865
No 102
>KOG1710|consensus
Probab=96.31 E-value=0.01 Score=52.05 Aligned_cols=81 Identities=20% Similarity=0.198 Sum_probs=58.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
+|+.|-|++.-+.. +-++....-++..+.+++-... +. ..||||+||-.|+-+..+ .
T Consensus 41 ~D~sGMs~LahAay-----kGnl~~v~lll~~gaDvN~~qh----g~-~YTpLmFAALSGn~dvcrllldaGa~~~~vNs 110 (396)
T KOG1710|consen 41 RDPSGMSVLAHAAY-----KGNLTLVELLLELGADVNDKQH----GT-LYTPLMFAALSGNQDVCRLLLDAGARMYLVNS 110 (396)
T ss_pred cCCCcccHHHHHHh-----cCcHHHHHHHHHhCCCcCcccc----cc-cccHHHHHHHcCCchHHHHHHhccCccccccc
Confidence 67888888777763 3356666555544343433322 32 357999999999999988 4
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
-|||+=..|+.-||.+||...-.+
T Consensus 111 vgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 111 VGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred hhhhHHHHHHHhcchHHHHHHhcc
Confidence 599999999999999999877553
No 103
>KOG0782|consensus
Probab=95.45 E-value=0.017 Score=54.72 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=45.8
Q ss_pred hHHHHHHHHHcCChhhhh---------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR---------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAE 146 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk---------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~ 146 (163)
.-+.||+||..|+-|.|+ ..|.|.||-|+..++..|.+||.+.||...-+.
T Consensus 899 ~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd 964 (1004)
T KOG0782|consen 899 HCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTD 964 (1004)
T ss_pred hhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecc
Confidence 447999999999999999 689999999999999999999999999875443
No 104
>KOG0818|consensus
Probab=95.31 E-value=0.02 Score=53.29 Aligned_cols=47 Identities=19% Similarity=0.140 Sum_probs=42.0
Q ss_pred HHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
-.||..+..|+++..- ..|.||||.|+++|+..=+++|.-+||++..
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a 195 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA 195 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC
Confidence 3789999999998744 5799999999999999999999999999874
No 105
>KOG0522|consensus
Probab=95.23 E-value=0.018 Score=53.55 Aligned_cols=49 Identities=22% Similarity=0.084 Sum_probs=37.1
Q ss_pred HcCChhhhhccCCcHHHHHHHcCCHHHHHHHHhCCCCCC------CCCCchhhhh
Q psy5714 105 AAGNISALRRWGKTPLDEAKTFKRDRIIQILEGSLSSTS------SAEDSEDESL 153 (163)
Q Consensus 105 ~~Gdl~~vkr~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~------~~~~~~~~~~ 153 (163)
..+.++..+-.|+||||.|+.-||.+.++.|+.+||... -.+.+|+.+.
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVST 98 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHc
Confidence 445555555679999999999999999999999999553 3344666543
No 106
>KOG4369|consensus
Probab=94.99 E-value=0.017 Score=58.30 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=31.3
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAED 147 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~ 147 (163)
..|-|||++++.+|..||=++|+..||+.+..|.
T Consensus 957 ktgltplme~AsgGyvdvg~~li~~gad~nasPv 990 (2131)
T KOG4369|consen 957 KTGLTPLMEMASGGYVDVGNLLIAAGADTNASPV 990 (2131)
T ss_pred ccCCcccchhhcCCccccchhhhhcccccccCCC
Confidence 4799999999999999999999999999987776
No 107
>KOG3676|consensus
Probab=94.96 E-value=0.039 Score=53.33 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHc---CChhhhh------------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAA---GNISALR------------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~---Gdl~~vk------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.+.|.||.|.-+ ++-+.++ ..|.||||.|+-+.+.++|++|++.||+.+.
T Consensus 142 ~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~a 212 (782)
T KOG3676|consen 142 TGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHA 212 (782)
T ss_pred hhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhh
Confidence 345788888763 3334444 5799999999999999999999999998864
No 108
>KOG3609|consensus
Probab=94.43 E-value=0.055 Score=52.57 Aligned_cols=47 Identities=23% Similarity=0.177 Sum_probs=42.6
Q ss_pred HHHHHHHHcCChhhhh-----------------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-----------------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-----------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
-+|+.|...|-+++|+ .-+-|||..||...|-||+++|+++|+..+.
T Consensus 90 dALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 90 DALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 3889999999999998 2478999999999999999999999999875
No 109
>KOG2384|consensus
Probab=94.22 E-value=0.085 Score=43.81 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=36.0
Q ss_pred cCChhhhhccCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCCCC
Q psy5714 106 AGNISALRRWGKTPLDEAKTFKRDRIIQILEGSL-SSTSSAED 147 (163)
Q Consensus 106 ~Gdl~~vkr~G~TPLh~Aa~~Gh~~vV~lLl~~G-A~~~~~~~ 147 (163)
+|++++-+-+|||||+.|+..|..++|.||+.+| |...-.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ 44 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDE 44 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCccccccccc
Confidence 5788888899999999999999999999999999 55544333
No 110
>KOG4369|consensus
Probab=93.87 E-value=0.024 Score=57.30 Aligned_cols=49 Identities=27% Similarity=0.348 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
...++|.+||-.||..+|+ |.+-|||..|+..|..++|++|+.+||+-+
T Consensus 789 kgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~ganke 851 (2131)
T KOG4369|consen 789 KGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKE 851 (2131)
T ss_pred ccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhcccc
Confidence 3456777777777777666 677777777777777777777777777654
No 111
>PF13606 Ank_3: Ankyrin repeat
Probab=93.30 E-value=0.048 Score=31.33 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=15.8
Q ss_pred HHHHHHHHHcCChhhhh
Q psy5714 97 IVTLLFNAAAGNISALR 113 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk 113 (163)
.|+||+||+.|++|.++
T Consensus 3 ~T~Lh~A~~~g~~e~v~ 19 (30)
T PF13606_consen 3 NTPLHLAASNGNIEIVK 19 (30)
T ss_pred CCHHHHHHHhCCHHHHH
Confidence 47999999999999998
No 112
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=93.11 E-value=0.046 Score=31.41 Aligned_cols=17 Identities=18% Similarity=0.300 Sum_probs=15.7
Q ss_pred HHHHHHHHHcCChhhhh
Q psy5714 97 IVTLLFNAAAGNISALR 113 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk 113 (163)
.||||+||..|+.+.++
T Consensus 3 ~TpLh~A~~~~~~~~v~ 19 (33)
T PF00023_consen 3 NTPLHYAAQRGHPDIVK 19 (33)
T ss_dssp BBHHHHHHHTTCHHHHH
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 47999999999999988
No 113
>KOG0506|consensus
Probab=92.32 E-value=0.04 Score=51.05 Aligned_cols=40 Identities=10% Similarity=0.094 Sum_probs=32.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhC-------CCCCCCCCCchhhhhcCC
Q psy5714 117 KTPLDEAKTFKRDRIIQILEGS-------LSSTSSAEDSEDESLQLP 156 (163)
Q Consensus 117 ~TPLh~Aa~~Gh~~vV~lLl~~-------GA~~~~~~~~~~~~~~~p 156 (163)
||.||.||.+||.++|+||++. ..+.+++|+.|+-.+.+-
T Consensus 540 RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~ 586 (622)
T KOG0506|consen 540 RTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHK 586 (622)
T ss_pred chhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcH
Confidence 3899999999999999999983 446678888777665543
No 114
>KOG0705|consensus
Probab=92.21 E-value=0.16 Score=48.10 Aligned_cols=30 Identities=20% Similarity=-0.032 Sum_probs=27.9
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.+|+|+||.|++.||..+.++|+=+|++..
T Consensus 659 ~~grt~LHLa~~~gnVvl~QLLiWyg~dv~ 688 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVLAQLLIWYGVDVM 688 (749)
T ss_pred CCCcchhhhhhhhcchhHHHHHHHhCccce
Confidence 578999999999999999999999999875
No 115
>KOG0521|consensus
Probab=88.97 E-value=0.22 Score=48.53 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
.++||.|...|+.-.++ .-|+||||.+...||+..+.+|+++||+....
T Consensus 657 ~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~ 718 (785)
T KOG0521|consen 657 CSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAF 718 (785)
T ss_pred cchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccccc
Confidence 46889999888877766 57999999999999999999999999988653
No 116
>KOG0782|consensus
Probab=88.50 E-value=0.52 Score=44.97 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=35.1
Q ss_pred HHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy5714 99 TLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLS 140 (163)
Q Consensus 99 ~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA 140 (163)
.++-|+..+|+-.+. ..-.|-||||+..|+.|||+||++||-
T Consensus 869 eil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p 923 (1004)
T KOG0782|consen 869 EILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGP 923 (1004)
T ss_pred HHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCC
Confidence 578888888865554 356799999999999999999999974
No 117
>KOG2505|consensus
Probab=86.92 E-value=0.47 Score=44.30 Aligned_cols=28 Identities=14% Similarity=0.003 Sum_probs=25.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
-.||||||+..|..++|.+||+.|.+..
T Consensus 430 tsT~LH~aa~qg~~k~v~~~Leeg~Dp~ 457 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVKYFLEEGCDPS 457 (591)
T ss_pred cchHHHHHHhcchHHHHHHHHHhcCCch
Confidence 4699999999999999999999997654
No 118
>KOG0783|consensus
Probab=80.43 E-value=0.98 Score=44.84 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=31.5
Q ss_pred hhhhhccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 109 ISALRRWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 109 l~~vkr~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.+..++.|||+||.|+..+..++++-|+.+|++.-
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~ 79 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVF 79 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceee
Confidence 45555999999999999999999999999999874
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=79.35 E-value=3.5 Score=35.37 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=28.2
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|-|=|+.|...+..+++.+|+++||..+.
T Consensus 252 NSGdtMLDNA~Ky~~~emi~~Llk~GA~~~k 282 (284)
T PF06128_consen 252 NSGDTMLDNAMKYKNSEMIAFLLKYGAISGK 282 (284)
T ss_pred CCcchHHHhHHhcCcHHHHHHHHHcCccccC
Confidence 5799999999999999999999999997653
No 120
>KOG2505|consensus
Probab=65.17 E-value=9.3 Score=35.98 Aligned_cols=39 Identities=21% Similarity=0.315 Sum_probs=30.9
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHh
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEG 137 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~ 137 (163)
+-|+||+||.+|+...|. +.|+||...+. +.||=...+.
T Consensus 430 tsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~a 481 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFIA 481 (591)
T ss_pred cchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHHH
Confidence 347999999999999988 67999999887 4555544443
No 121
>KOG0520|consensus
Probab=63.19 E-value=2.7 Score=42.05 Aligned_cols=44 Identities=23% Similarity=0.153 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHcCChhhhh-------------------ccCCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------------RWGKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
.+.||||||++.|+...+. -.|.|+-..|..+||..+.-||-+.
T Consensus 640 ~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 640 NGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred CCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 4558999999999887776 3599999999999999999999875
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=57.68 E-value=14 Score=25.12 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=34.0
Q ss_pred HHHHHHHcCChhhhh---cc---CCcHHHHHHHcCCHHHHHHHHhC
Q psy5714 99 TLLFNAAAGNISALR---RW---GKTPLDEAKTFKRDRIIQILEGS 138 (163)
Q Consensus 99 ~L~~AA~~Gdl~~vk---r~---G~TPLh~Aa~~Gh~~vV~lLl~~ 138 (163)
-|..|...|+.|.++ +. -...|..|+..-+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~~~~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKNKPDNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHhccHHHHHHHHHHHhhHHHHHHHHHh
Confidence 578999999999998 22 24569999999999999999985
No 123
>KOG3609|consensus
Probab=54.16 E-value=12 Score=37.01 Aligned_cols=44 Identities=16% Similarity=0.227 Sum_probs=28.7
Q ss_pred HHHHHHHcCChhhhh-----------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 99 TLLFNAAAGNISALR-----------------RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 99 ~L~~AA~~Gdl~~vk-----------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
.-+.|+..||+-.|+ .=|+++|+.|..+.|.|++++|+++....
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~ 88 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE 88 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc
Confidence 446666667766666 13677777777777777777777765433
No 124
>PF09722 DUF2384: Protein of unknown function (DUF2384); InterPro: IPR024467 This domain is found predominantly in proteobacterial proteins. Its function in unknown.
Probab=39.38 E-value=44 Score=21.05 Aligned_cols=31 Identities=29% Similarity=0.542 Sum_probs=21.9
Q ss_pred CChhhhhc---------cCCcHHHHHH-HcCCHHHHHHHHh
Q psy5714 107 GNISALRR---------WGKTPLDEAK-TFKRDRIIQILEG 137 (163)
Q Consensus 107 Gdl~~vkr---------~G~TPLh~Aa-~~Gh~~vV~lLl~ 137 (163)
||.+..++ .|+||+.... ..|-..|-++|-.
T Consensus 9 gd~~~a~~Wl~~p~~~l~g~~Plel~~t~~G~~~V~~~L~~ 49 (54)
T PF09722_consen 9 GDEDKARRWLRTPNPALGGRTPLELLRTEAGAERVLDYLDR 49 (54)
T ss_pred CCHHHHHHHHHChHHHhCCCCHHHHHcChHHHHHHHHHHHH
Confidence 77777774 4889999998 5566666666643
No 125
>KOG0521|consensus
Probab=37.35 E-value=23 Score=34.84 Aligned_cols=31 Identities=13% Similarity=0.046 Sum_probs=28.0
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|.|+||.|+..|-.-++++|+++||+.+.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~ 684 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNA 684 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchh
Confidence 4579999999999999999999999998753
No 126
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=36.89 E-value=44 Score=27.56 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=33.1
Q ss_pred HHHHHHHcCChhhhh----ccC---CcHHHHHHHcCCHHHHHHHHh
Q psy5714 99 TLLFNAAAGNISALR----RWG---KTPLDEAKTFKRDRIIQILEG 137 (163)
Q Consensus 99 ~L~~AA~~Gdl~~vk----r~G---~TPLh~Aa~~Gh~~vV~lLl~ 137 (163)
-|.+||..|-+..+. ..| .+.|-.|+...|..|..+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDIIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccHHHHHHHHHhhHHHHHHHhhc
Confidence 778999999987765 444 389999999999999999875
No 127
>cd01021 GEWL Goose Egg White Lysozyme domain. Eukaryotic "goose-type" lysozymes (GEWL). These enzymes catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc). Members include tunicate, Japanese flounder, ostrich, and mouse.
Probab=32.63 E-value=33 Score=27.47 Aligned_cols=22 Identities=9% Similarity=0.037 Sum_probs=17.9
Q ss_pred HHHHHHHHcCChhhhhccCCcH
Q psy5714 98 VTLLFNAAAGNISALRRWGKTP 119 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vkr~G~TP 119 (163)
+.+-+||+++=...|++||.-|
T Consensus 123 l~~aLAAYNAG~g~V~~y~gip 144 (166)
T cd01021 123 LKGGISAYNAGAGNVRSYEGMD 144 (166)
T ss_pred hhhHHHHhccCHHHHhhcCCCC
Confidence 4678899999999999887644
No 128
>COG5447 Uncharacterized conserved protein [Function unknown]
Probab=26.40 E-value=68 Score=24.27 Aligned_cols=64 Identities=20% Similarity=0.299 Sum_probs=40.8
Q ss_pred CcceEEEecCcee-EEeecCC----CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccc
Q psy5714 28 SGSMLVVVPNTMG-IALFSPP----LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIG 94 (163)
Q Consensus 28 ~G~~~~vvp~~~g-i~~~sP~----LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~ 94 (163)
.|+|++-.-++.| -..|||+ .|+.+ .+-.+++...+.-.-...+..+....++||..|..|.+.
T Consensus 33 AGAifvk~r~R~G~~~Ly~pAPQt~~d~e~---~~~R~f~~~l~g~~~~~~~a~lere~RfD~DiWvVEiE~ 101 (115)
T COG5447 33 AGAIFVKQRGRLGTERLYSPAPQTSYDEES---DGERFFEQRLRGVDEEALDARLEREIRFDPDIWVVEIED 101 (115)
T ss_pred cceEEEEEeccccchhhccCCCcccccccc---chhhHHHHHhcCCCHHHHHHHHHHhhccCCCeEEEEEec
Confidence 5889999999988 5689999 33433 555555554433222222333334578999999877654
No 129
>TIGR02293 TAS_TIGR02293 putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module.
Probab=25.76 E-value=78 Score=23.87 Aligned_cols=26 Identities=12% Similarity=0.070 Sum_probs=18.2
Q ss_pred cCCcHHHHH-HHcCCHHHHHHHHh--CCC
Q psy5714 115 WGKTPLDEA-KTFKRDRIIQILEG--SLS 140 (163)
Q Consensus 115 ~G~TPLh~A-a~~Gh~~vV~lLl~--~GA 140 (163)
.|+|||+.. -..|...|.++|.. +|+
T Consensus 103 gg~~Pldll~t~~G~~~V~~~L~rie~G~ 131 (133)
T TIGR02293 103 GNRRPIDLLLTEAGAEIVEDLLGRLEYGV 131 (133)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHcCC
Confidence 378999998 55666667777653 554
No 130
>PF08077 Cm_res_leader: Chloramphenicol resistance gene leader peptide; InterPro: IPR012537 This family consists of chloramphenicol (Cm) resistance gene leader peptides. Inducible resistance to Cm in both Gram-positive and Gram-negative bacteria is controlled by translation attenuation. In translation attenuation, the ribosome-binding-site (RBS) for the resistance determinant is sequestered in a secondary structure domain within the mRNA. Preceding the secondary structure is a short, translated ORF termed the leader. Ribosome stalling in the leader causes the destabilisation of the downstream secondary structure, allowing initiation of translation of the Cm resistance gene [].
Probab=24.13 E-value=60 Score=16.42 Aligned_cols=10 Identities=60% Similarity=0.956 Sum_probs=6.8
Q ss_pred cCCCcceEEE
Q psy5714 25 SGVSGSMLVV 34 (163)
Q Consensus 25 sgv~G~~~~v 34 (163)
|||-|++.+|
T Consensus 2 sgvpgalavv 11 (17)
T PF08077_consen 2 SGVPGALAVV 11 (17)
T ss_pred CCCCceEEEE
Confidence 7787776554
No 131
>PF10683 DBD_Tnp_Hermes: Hermes transposase DNA-binding domain ; InterPro: IPR018473 This domain confers specific DNA-binding on Hermes transposase [].; PDB: 2BW3_B.
Probab=22.19 E-value=5 Score=27.82 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=23.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCchhhhhcCCc
Q psy5714 118 TPLDEAKTFKRDRIIQILEGSLSSTSSAEDSEDESLQLPQ 157 (163)
Q Consensus 118 TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~~~~~~~~~p~ 157 (163)
-|++.-...|-.+++++|++-||.+++. .+.+-.+|.
T Consensus 29 Rpfsiv~gsGfk~la~~li~IGA~yG~~---V~vd~lLP~ 65 (68)
T PF10683_consen 29 RPFSIVSGSGFKKLAQFLINIGATYGEN---VNVDDLLPH 65 (68)
T ss_dssp --GGGGG-HHHHHHHHHHHHHHHHH-S----B-HHHHS--
T ss_pred CcceeeccccHHHHHHHHHHHhHHhccc---CCHHHcCCC
Confidence 3666667778899999999999999963 444445554
No 132
>smart00857 Resolvase Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.
Probab=21.89 E-value=2.4e+02 Score=20.45 Aligned_cols=75 Identities=19% Similarity=0.186 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-----ccCCcHHHHHHHcCCHH
Q psy5714 56 RGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-----RWGKTPLDEAKTFKRDR 130 (163)
Q Consensus 56 ~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-----r~G~TPLh~Aa~~Gh~~ 130 (163)
+....|+..+++.++.+..... |........+.+....|+-.+..|+++.|= |.+|.+.+.+.
T Consensus 19 ~Q~~~~~~~a~~~g~~i~~~~~------d~~~Sg~~~~Rp~l~~ll~~~~~g~~~~ivv~~~~Rl~R~~~~~~~------ 86 (148)
T smart00857 19 RQLEALRAYAKANGWEVVRIYE------DEGVSGKKADRPGLQRLLADLRAGDIDVLVVYKLDRLGRSLRDLLA------ 86 (148)
T ss_pred HHHHHHHHHHHHCCCEEEEEEE------eCCCcCCCCCCHHHHHHHHHHHcCCCCEEEEeccchhhCcHHHHHH------
Confidence 5667888888888877542111 221111112345667888999999976654 89999886554
Q ss_pred HHHHHHhCCCCC
Q psy5714 131 IIQILEGSLSST 142 (163)
Q Consensus 131 vV~lLl~~GA~~ 142 (163)
+++.|.++|..+
T Consensus 87 ~~~~l~~~gi~l 98 (148)
T smart00857 87 LLELLEKKGVRL 98 (148)
T ss_pred HHHHHHHCCCEE
Confidence 477888887755
Done!