Query psy5714
Match_columns 163
No_of_seqs 207 out of 879
Neff 5.6
Searched_HMMs 29240
Date Sat Aug 17 00:46:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5714.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5714hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uo9_A Glutaminase kidney isof 100.0 5.6E-36 1.9E-40 268.8 3.0 92 1-94 390-481 (534)
2 3voy_A Glutaminase kidney isof 100.0 5E-33 1.7E-37 238.4 1.6 74 1-76 242-315 (315)
3 1u60_A Probable glutaminase YB 100.0 2.3E-32 7.8E-37 234.0 2.7 72 1-74 238-309 (310)
4 2pby_A Glutaminase; secsg, rik 100.0 4.4E-32 1.5E-36 232.1 3.1 71 1-73 238-308 (308)
5 3agd_A Salt-tolerant glutamina 100.0 3.2E-31 1.1E-35 235.2 4.5 75 1-77 237-311 (456)
6 1mki_A Probable glutaminase YB 100.0 4.8E-31 1.6E-35 226.8 2.7 71 1-73 250-330 (330)
7 4gpm_A Engineered protein OR26 99.3 2.4E-12 8.1E-17 98.7 7.9 28 115-142 135-162 (169)
8 4gpm_A Engineered protein OR26 99.3 5.5E-12 1.9E-16 96.7 8.5 86 48-144 33-131 (169)
9 3c5r_A BARD-1, BRCA1-associate 99.3 1.2E-11 4.2E-16 89.0 8.8 89 45-144 3-104 (137)
10 1n0q_A 3ANK, 3 ankyrin repeats 99.3 1.2E-11 4.1E-16 84.1 8.0 46 96-141 35-93 (93)
11 3aaa_C Myotrophin, protein V-1 99.2 1.7E-11 5.9E-16 86.9 6.3 73 66-144 16-101 (123)
12 3twr_A Tankyrase-2; ankyrin re 99.2 8.1E-11 2.8E-15 86.8 9.1 86 48-144 38-136 (165)
13 4b93_B Ankyrin repeat domain-c 99.2 1.1E-10 3.7E-15 94.9 9.0 50 95-144 151-213 (269)
14 1ihb_A P18-INK4C(INK6), cyclin 99.2 1.2E-10 4E-15 85.3 8.2 44 98-141 72-128 (162)
15 1awc_B Protein (GA binding pro 99.1 2.5E-10 8.7E-15 83.5 9.5 86 48-144 30-128 (153)
16 1oy3_D Transcription factor in 99.1 1.4E-10 4.9E-15 91.0 8.4 87 48-144 154-253 (282)
17 3f6q_A Integrin-linked protein 99.1 1.7E-10 5.9E-15 86.4 8.3 86 48-144 35-133 (179)
18 1n0r_A 4ANK, 4 ankyrin repeats 99.1 2E-10 6.8E-15 79.8 8.1 43 98-140 70-125 (126)
19 2l6b_A NR1C; ankyrin, consensu 99.1 8.4E-11 2.9E-15 82.2 5.7 85 48-143 5-102 (115)
20 1n0q_A 3ANK, 3 ankyrin repeats 99.1 6.1E-11 2.1E-15 80.5 4.4 48 97-144 3-63 (93)
21 3v30_A DNA-binding protein rfx 99.1 4.2E-10 1.4E-14 83.4 9.2 86 48-144 32-130 (172)
22 3v31_A Ankyrin repeat family A 99.1 2.8E-10 9.5E-15 84.0 7.8 86 48-144 32-130 (167)
23 2jab_A H10-2-G3; HER2, darpin, 99.1 4.2E-10 1.4E-14 81.1 8.0 81 58-144 15-108 (136)
24 2rfm_A Putative ankyrin repeat 99.1 8.9E-10 3E-14 83.2 9.6 28 115-142 133-160 (192)
25 2y1l_E Darpin-8.4; hydrolase-i 99.1 6.9E-10 2.4E-14 82.6 8.9 86 48-144 43-141 (169)
26 3ehr_A Osteoclast-stimulating 99.1 1.9E-10 6.4E-15 89.0 5.9 86 48-144 69-168 (222)
27 1d9s_A Cyclin-dependent kinase 99.1 1.4E-10 4.9E-15 83.6 4.9 85 48-144 8-106 (136)
28 1ycs_B 53BP2, P53BP2; ankyrin 99.1 3.7E-10 1.3E-14 89.0 7.7 81 58-144 38-131 (239)
29 1d9s_A Cyclin-dependent kinase 99.0 6.9E-11 2.4E-15 85.3 3.1 46 96-141 78-136 (136)
30 2jab_A H10-2-G3; HER2, darpin, 99.0 6.4E-10 2.2E-14 80.2 7.9 81 48-139 43-136 (136)
31 1ikn_D Protein (I-kappa-B-alph 99.0 6.2E-10 2.1E-14 86.4 8.3 90 48-144 74-179 (236)
32 2rfm_A Putative ankyrin repeat 99.0 6.7E-10 2.3E-14 83.9 8.1 86 48-144 31-129 (192)
33 1n0r_A 4ANK, 4 ankyrin repeats 99.0 1.5E-09 5E-14 75.4 8.9 82 52-144 2-96 (126)
34 4g8k_A 2-5A-dependent ribonucl 99.0 4.9E-10 1.7E-14 91.6 7.2 49 97-145 240-302 (337)
35 1yyh_A HN1;, notch 1, ankyrin 99.0 8.4E-10 2.9E-14 87.1 8.3 49 96-144 157-218 (253)
36 2dzn_A Probable 26S proteasome 99.0 8.7E-10 3E-14 84.3 8.1 49 96-144 140-203 (228)
37 3deo_A Signal recognition part 99.0 5.2E-10 1.8E-14 84.6 6.7 76 62-144 49-138 (183)
38 1k1a_A B-cell lymphoma 3-encod 99.0 1.2E-09 4.1E-14 84.1 8.4 49 96-144 150-211 (241)
39 1n11_A Ankyrin; clathrin, BAND 99.0 1E-09 3.4E-14 92.6 8.7 85 49-144 275-372 (437)
40 2xai_A ASB-9, ankyrin repeat a 99.0 1.1E-09 3.9E-14 86.9 8.4 46 98-143 136-193 (261)
41 3utm_A Tankyrase-1; tankyrase, 99.0 1.4E-09 4.7E-14 87.5 8.7 86 48-144 54-152 (351)
42 1wdy_A 2-5A-dependent ribonucl 99.0 1.4E-09 4.8E-14 84.8 8.4 49 96-144 219-281 (285)
43 1ihb_A P18-INK4C(INK6), cyclin 99.0 5.8E-10 2E-14 81.5 5.6 83 48-141 66-162 (162)
44 3aji_A 26S proteasome non-ATPa 99.0 1.8E-09 6E-14 83.0 8.5 48 96-143 139-199 (231)
45 1bi7_B P16INK4A, MTS1, multipl 99.0 4.4E-10 1.5E-14 82.8 4.9 50 96-145 77-140 (156)
46 1dcq_A PYK2-associated protein 99.0 1E-09 3.5E-14 89.8 7.5 88 49-144 166-266 (278)
47 3v30_A DNA-binding protein rfx 99.0 4.4E-10 1.5E-14 83.3 4.8 86 48-144 65-163 (172)
48 2zgd_A 3 repeat synthetic anky 99.0 1.2E-09 4.3E-14 76.6 6.8 52 93-144 21-85 (110)
49 2f8y_A Notch homolog 1, transl 99.0 1.9E-09 6.5E-14 82.4 8.4 47 97-143 126-185 (223)
50 3ui2_A Signal recognition part 99.0 9.3E-10 3.2E-14 87.5 6.8 81 57-144 45-139 (244)
51 1oy3_D Transcription factor in 99.0 1.2E-09 4E-14 85.8 7.3 86 48-144 5-106 (282)
52 2vge_A RELA-associated inhibit 99.0 2.2E-09 7.5E-14 85.0 8.9 78 61-144 25-115 (229)
53 3lvq_E ARF-GAP with SH3 domain 99.0 9.6E-10 3.3E-14 96.4 7.4 96 47-150 166-274 (497)
54 1s70_B 130 kDa myosin-binding 99.0 1.7E-09 5.9E-14 86.1 8.2 49 96-144 199-260 (299)
55 1bd8_A P19INK4D CDK4/6 inhibit 99.0 1.9E-09 6.5E-14 78.4 7.8 84 48-144 32-128 (156)
56 1bd8_A P19INK4D CDK4/6 inhibit 99.0 1.8E-09 6E-14 78.6 7.4 40 98-137 103-154 (156)
57 2f8y_A Notch homolog 1, transl 98.9 2.8E-09 9.6E-14 81.4 8.5 85 48-143 121-218 (223)
58 4g8k_A 2-5A-dependent ribonucl 98.9 1.4E-09 4.9E-14 88.8 7.2 51 95-145 24-88 (337)
59 2etb_A Transient receptor pote 98.9 2.1E-09 7.1E-14 84.4 7.7 95 48-144 39-167 (256)
60 3hra_A Ankyrin repeat family p 98.9 3.3E-09 1.1E-13 79.8 8.5 84 48-142 35-133 (201)
61 3b7b_A Euchromatic histone-lys 98.9 2.4E-09 8.3E-14 82.5 7.9 48 97-144 145-205 (237)
62 2b0o_E UPLC1; arfgap, structur 98.9 7.8E-10 2.7E-14 91.6 5.4 97 48-152 186-295 (301)
63 2y1l_E Darpin-8.4; hydrolase-i 98.9 3.1E-09 1E-13 79.0 8.1 81 48-139 76-169 (169)
64 1s70_B 130 kDa myosin-binding 98.9 1.1E-09 3.8E-14 87.2 6.0 86 48-144 36-134 (299)
65 3utm_A Tankyrase-1; tankyrase, 98.9 2E-09 6.8E-14 86.6 7.4 86 48-144 207-308 (351)
66 1n11_A Ankyrin; clathrin, BAND 98.9 1.7E-09 5.9E-14 91.2 7.3 85 48-143 10-107 (437)
67 3d9h_A CDNA FLJ77766, highly s 98.9 3.6E-09 1.2E-13 85.6 8.9 46 98-143 192-249 (285)
68 3aaa_C Myotrophin, protein V-1 98.9 1.5E-09 5E-14 76.8 5.7 49 96-144 7-68 (123)
69 3ljn_A Hypothetical protein; a 98.9 1.3E-09 4.5E-14 89.9 6.0 86 48-144 134-239 (364)
70 2rfa_A Transient receptor pote 98.9 3.9E-09 1.3E-13 81.3 8.1 83 52-144 3-103 (232)
71 3twr_A Tankyrase-2; ankyrin re 98.9 5.1E-09 1.8E-13 77.0 8.4 49 96-144 42-103 (165)
72 3f6q_A Integrin-linked protein 98.9 3E-09 1E-13 79.6 6.9 49 96-144 39-100 (179)
73 1yyh_A HN1;, notch 1, ankyrin 98.9 3E-09 1E-13 83.9 7.1 47 97-143 125-184 (253)
74 4b93_B Ankyrin repeat domain-c 98.9 5E-09 1.7E-13 85.0 8.6 86 48-144 82-180 (269)
75 4hbd_A KN motif and ankyrin re 98.9 6.1E-10 2.1E-14 90.1 3.1 49 96-144 183-245 (276)
76 3v31_A Ankyrin repeat family A 98.9 4.3E-09 1.5E-13 77.5 7.4 49 96-144 36-97 (167)
77 1ikn_D Protein (I-kappa-B-alph 98.9 1.9E-09 6.5E-14 83.7 5.5 87 47-143 112-211 (236)
78 3aji_A 26S proteasome non-ATPa 98.9 8.5E-09 2.9E-13 79.1 9.0 47 97-143 107-166 (231)
79 2xai_A ASB-9, ankyrin repeat a 98.9 7.9E-09 2.7E-13 82.0 9.1 29 115-143 133-161 (261)
80 2pnn_A Transient receptor pote 98.9 2.8E-09 9.6E-14 84.6 6.4 86 50-144 146-261 (273)
81 1dcq_A PYK2-associated protein 98.9 4.6E-09 1.6E-13 85.9 7.8 50 95-144 168-233 (278)
82 1bi7_B P16INK4A, MTS1, multipl 98.9 1.1E-09 3.8E-14 80.6 3.7 85 48-144 8-106 (156)
83 3jxi_A Vanilloid receptor-rela 98.9 1.3E-09 4.3E-14 85.7 4.1 89 50-147 138-256 (260)
84 2dzn_A Probable 26S proteasome 98.9 6E-09 2E-13 79.6 7.8 48 96-143 107-168 (228)
85 3c5r_A BARD-1, BRCA1-associate 98.9 2E-09 7E-14 77.2 4.9 49 96-144 10-71 (137)
86 2rfa_A Transient receptor pote 98.9 6.8E-09 2.3E-13 79.9 8.1 48 96-143 121-185 (232)
87 2pnn_A Transient receptor pote 98.9 6.1E-09 2.1E-13 82.6 8.0 98 43-145 4-130 (273)
88 2l6b_A NR1C; ankyrin, consensu 98.9 1.6E-09 5.3E-14 75.6 3.8 48 96-143 9-69 (115)
89 3d9h_A CDNA FLJ77766, highly s 98.8 5.5E-09 1.9E-13 84.5 7.6 85 48-143 55-152 (285)
90 2zgd_A 3 repeat synthetic anky 98.8 3.4E-09 1.1E-13 74.4 5.5 78 48-136 20-110 (110)
91 1k1a_A B-cell lymphoma 3-encod 98.8 7.1E-09 2.4E-13 79.7 7.8 44 97-140 47-103 (241)
92 3ljn_A Hypothetical protein; a 98.8 3.2E-09 1.1E-13 87.6 6.1 84 48-142 169-270 (364)
93 3eu9_A Huntingtin-interacting 98.8 6.5E-09 2.2E-13 79.2 7.3 46 98-143 78-136 (240)
94 3kea_A K1L; tropism, ANK repea 98.8 2.1E-09 7.3E-14 87.1 4.5 82 48-142 27-121 (285)
95 3lvq_E ARF-GAP with SH3 domain 98.8 4.4E-09 1.5E-13 92.2 6.4 52 93-144 168-235 (497)
96 3hra_A Ankyrin repeat family p 98.8 8.2E-09 2.8E-13 77.6 6.9 86 48-144 68-173 (201)
97 3b7b_A Euchromatic histone-lys 98.8 2.4E-08 8.4E-13 76.8 9.4 46 98-143 79-138 (237)
98 4hbd_A KN motif and ankyrin re 98.8 8.5E-09 2.9E-13 83.3 7.1 82 48-140 179-274 (276)
99 1wdy_A 2-5A-dependent ribonucl 98.8 1.7E-08 5.8E-13 78.6 8.5 86 49-145 36-134 (285)
100 3deo_A Signal recognition part 98.8 9.6E-09 3.3E-13 77.6 6.3 51 94-144 42-104 (183)
101 1awc_B Protein (GA binding pro 98.8 2E-08 6.8E-13 73.2 7.8 78 48-136 63-153 (153)
102 2fo1_E LIN-12 protein; beta-ba 98.8 7.8E-09 2.7E-13 86.8 6.1 50 95-144 278-341 (373)
103 2vge_A RELA-associated inhibit 98.8 2E-08 6.7E-13 79.5 7.7 52 93-144 18-82 (229)
104 3ui2_A Signal recognition part 98.7 1E-08 3.4E-13 81.5 5.8 51 94-144 43-105 (244)
105 2fo1_E LIN-12 protein; beta-ba 98.7 1.4E-08 4.7E-13 85.3 6.8 84 48-142 275-372 (373)
106 1ycs_B 53BP2, P53BP2; ankyrin 98.7 9.8E-09 3.3E-13 80.8 5.4 50 95-144 36-98 (239)
107 1sw6_A Regulatory protein SWI6 98.7 1.6E-08 5.5E-13 83.5 7.0 30 115-144 282-311 (327)
108 2etb_A Transient receptor pote 98.7 2.8E-08 9.5E-13 77.9 7.8 50 95-144 42-118 (256)
109 3jxi_A Vanilloid receptor-rela 98.7 1.7E-08 5.7E-13 79.2 6.4 51 95-145 45-122 (260)
110 3eu9_A Huntingtin-interacting 98.7 6.6E-08 2.3E-12 73.6 8.9 87 47-144 4-104 (240)
111 2b0o_E UPLC1; arfgap, structur 98.7 1.8E-08 6.2E-13 83.3 6.2 50 95-144 189-254 (301)
112 3jue_A Arfgap with coiled-coil 98.7 2.9E-08 9.9E-13 85.3 6.9 50 95-144 234-296 (368)
113 3ehr_A Osteoclast-stimulating 98.7 1.6E-08 5.4E-13 78.1 4.7 49 96-144 73-135 (222)
114 3kea_A K1L; tropism, ANK repea 98.6 6.5E-08 2.2E-12 78.3 7.4 28 115-142 160-187 (285)
115 3jue_A Arfgap with coiled-coil 98.6 7.7E-08 2.6E-12 82.6 6.7 83 50-143 233-328 (368)
116 3t8k_A Uncharacterized protein 98.6 3.6E-08 1.2E-12 76.2 4.1 50 95-144 37-109 (186)
117 1sw6_A Regulatory protein SWI6 98.5 1.3E-07 4.4E-12 78.1 6.4 81 48-139 127-228 (327)
118 2aja_A Ankyrin repeat family p 98.4 3.5E-07 1.2E-11 78.6 6.3 48 95-142 127-189 (376)
119 3t8k_A Uncharacterized protein 98.4 1.4E-07 4.7E-12 72.9 3.3 47 98-144 8-70 (186)
120 2aja_A Ankyrin repeat family p 98.3 2.4E-07 8.1E-12 79.7 3.6 45 97-141 93-153 (376)
121 1dny_A Non-ribosomal peptide s 27.1 54 0.0018 21.6 3.2 33 41-73 32-64 (91)
122 3zrh_A Ubiquitin thioesterase 25.8 81 0.0028 28.0 4.8 24 114-137 67-90 (454)
123 4i4d_A Peptide synthetase NRPS 22.8 50 0.0017 21.6 2.3 33 41-73 34-66 (93)
124 3bvp_A INT, TP901-1 integrase; 21.0 52 0.0018 23.2 2.2 88 45-143 12-106 (138)
No 1
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=100.00 E-value=5.6e-36 Score=268.82 Aligned_cols=92 Identities=51% Similarity=0.863 Sum_probs=86.1
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhh
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAA 80 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~ 80 (163)
|.|||||.. .|+|||+||+|||||||||||+||||++|||||||+||++|||++|+++||.|+++++||+||+++|+.
T Consensus 390 M~TCGmYD~--SGefA~rVGLPaKSGVgGGIlaVVPg~~GIav~SP~LD~~GNSvrG~~~le~Ls~~l~LhiFd~l~h~~ 467 (534)
T 3uo9_A 390 MHSCGMYDF--SGQFAFHVGLPAKSGVAGGILLVVPNVMGMMCWSPPLDKMGNSVKGIHFCHDLVSLCNFHNYDNLRHFA 467 (534)
T ss_dssp HHHHSSGGG--HHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECSCBCTTSCBHHHHHHHHHHHHHBSCSTTCCSSCCS
T ss_pred HhHcCCcch--HHHHHHHcCCcccccccceEEEEeCCCcEEEEECCCCCCCCCcHHHHHHHHHHHHHhCccccccccccc
Confidence 889999997 599999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCcccccc
Q psy5714 81 NKIDPRKHKYSSIG 94 (163)
Q Consensus 81 ~kidpr~~~~e~~~ 94 (163)
+|+|||++..+.+.
T Consensus 468 ~k~dpr~~~~~~~~ 481 (534)
T 3uo9_A 468 KKLDPRREGGDQRH 481 (534)
T ss_dssp SCBCTTSCCC----
T ss_pred cccCcccccccccc
Confidence 99999999988653
No 2
>3voy_A Glutaminase kidney isoform, mitochondrial; hydrolase; 2.20A {Homo sapiens} PDB: 3czd_A 3voz_A* 3vp0_A* 3vp1_A* 3vp2_A 3vp3_A 3vp4_A
Probab=99.97 E-value=5e-33 Score=238.42 Aligned_cols=74 Identities=55% Similarity=0.977 Sum_probs=71.7
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcchhhh
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKYDNL 76 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L 76 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||++|||||||+||++|||++|+++||.|+++|+||+||+|
T Consensus 242 M~TcGmYd~--SG~fa~~VGlPaKSGVgGGIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~lh~~d~~ 315 (315)
T 3voy_A 242 MHSCGMYDF--SGQFAFHVGLPAKSGVAGGILLVVPNVMGMMCWSPPLDKMGNSVKGIHFCHDLVSLCNFHNYDNL 315 (315)
T ss_dssp HHHHSSGGG--HHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECSEECTTSCBHHHHHHHHHHHHHHCCCTTCCC
T ss_pred HhHcCCcch--HHHHHHHcCCcccccccceEEEEeCCCcEEEEECCCCCCCCCcHHHHHHHHHHHHHhCccccccC
Confidence 789999997 59999999999999999999999999999999999999999999999999999999999999764
No 3
>1u60_A Probable glutaminase YBAS; structural genomics, APC5046, PSI, protein structure initiat midwest center for structural genomics, MCSG; 1.61A {Escherichia coli} SCOP: e.3.1.2
Probab=99.97 E-value=2.3e-32 Score=233.98 Aligned_cols=72 Identities=43% Similarity=0.738 Sum_probs=70.3
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcchh
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKYD 74 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd 74 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||++|||||||+||++|||++|+++||.|+++++||+|+
T Consensus 238 M~TcGmYd~--SG~fa~~VGlPaKSGVgGGIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~if~ 309 (310)
T 1u60_A 238 MMMEGLYGR--SGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFK 309 (310)
T ss_dssp HHHHTTGGG--HHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECSCBCTTSCBHHHHHHHHHHHHHHTCCTTC
T ss_pred HhhcCCchh--HHHHHHHcCCceeccCCceEEEEeCCceEEEEECCCCCCCCCcHHHHHHHHHHHHHhCCCCCC
Confidence 789999997 599999999999999999999999999999999999999999999999999999999999995
No 4
>2pby_A Glutaminase; secsg, riken, structural genomics, PSI, protein structure initiative, riken structural genomics/proteomics initiative, RSGI; 2.07A {Geobacillus kaustophilus}
Probab=99.97 E-value=4.4e-32 Score=232.07 Aligned_cols=71 Identities=42% Similarity=0.703 Sum_probs=69.5
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||++|||+|||+||++|||++|+++||.|+++++||+|
T Consensus 238 M~TcGmYd~--SG~fa~~VGlPaKSGVgGGIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~if 308 (308)
T 2pby_A 238 MVTCGMYNS--SGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308 (308)
T ss_dssp HHHSSSTTC--HHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECCCBCTTSSBHHHHHHHHHHHHHHTCCCC
T ss_pred HhhcCCchh--HHHHHHHcCCccccccCceEEEEeCCceEEEEECCCCCCCCCcHHHHHHHHHHHHHhCCCcC
Confidence 789999997 59999999999999999999999999999999999999999999999999999999999997
No 5
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A
Probab=99.96 E-value=3.2e-31 Score=235.24 Aligned_cols=75 Identities=44% Similarity=0.723 Sum_probs=72.3
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEecCceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCCcchhhhH
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVPNTMGIALFSPPLDALGNSCRGVQFCEELVKTFNFHKYDNLR 77 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~ 77 (163)
|.|||||.. .|+|||+||+|+|||||||||+||||+||||||||+||++|||++|+++||.|+++++||+|+...
T Consensus 237 M~TCGmYD~--SGefA~rVGLPaKSGVgGGIlaVVPg~~GIav~SP~LD~~GNSvrG~~~le~Ls~~~~lsiF~~~~ 311 (456)
T 3agd_A 237 MTSSGMYDA--AGQWLADVGIPAKSGVAGGVLGALPGRVGIGVFSPRLDEVGNSARGVLACRRLSEDFRLHLMDGDS 311 (456)
T ss_dssp HHHHTTTTS--SSCHHHHTCCCEEECTTSEEEEEETTTEEEEEECSCBCTTSSBHHHHHHHHHHHHHTTCCTTCCCC
T ss_pred HhhcCCchh--HHHHHHHcCCceeccccceEEEEeCCceEEEEECCCCCCCCCcHHHHHHHHHHHHHhCCcccCCCC
Confidence 889999997 599999999999999999999999999999999999999999999999999999999999997664
No 6
>1mki_A Probable glutaminase YBGJ; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; HET: SEP; 2.00A {Bacillus subtilis} SCOP: e.3.1.2 PDB: 2osu_A* 3brm_A* 3agf_A
Probab=99.96 E-value=4.8e-31 Score=226.82 Aligned_cols=71 Identities=31% Similarity=0.581 Sum_probs=69.5
Q ss_pred CCcccccccCCCCCceeeecCccccCCCcceEEEec----------CceeEEeecCCCCCCCCcHHHHHHHHHHHHhcCC
Q psy5714 1 MSSSSQYQKWDILTPIFQVGLPAKSGVSGSMLVVVP----------NTMGIALFSPPLDALGNSCRGVQFCEELVKTFNF 70 (163)
Q Consensus 1 ~~~~~~~~~~~~~~~a~~vG~PaKsgv~G~~~~vvp----------~~~gi~~~sP~LD~~GNSv~g~~~~~~ls~~l~l 70 (163)
|.|||||.. .|+|||+||+|+|||||||||+||| |++|||||||+||++|||++|+++||.|+++++|
T Consensus 250 M~TCGmYd~--SGefa~~VGlPaKSGVgGGIlavvP~~~~~~~~~~g~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l 327 (330)
T 1mki_A 250 MLTCGMYNA--SGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGMLLKHMAQEWEL 327 (330)
T ss_dssp HHHHTTGGG--HHHHHHHTCSCEEECTTSEEEEEECTTTTCSSTTTTCEEEEEECSCBCTTSSBHHHHHHHHHHHHHHTC
T ss_pred HhhcCCchh--HHHHHHHcCCceeccccceEEEEecccccccccccCCeeEEEECCCCCCCCCcHHHHHHHHHHHHHhCc
Confidence 789999997 5999999999999999999999999 9999999999999999999999999999999999
Q ss_pred cch
Q psy5714 71 HKY 73 (163)
Q Consensus 71 ~if 73 (163)
|+|
T Consensus 328 ~iF 330 (330)
T 1mki_A 328 SIF 330 (330)
T ss_dssp CCC
T ss_pred CcC
Confidence 997
No 7
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.34 E-value=2.4e-12 Score=98.74 Aligned_cols=28 Identities=29% Similarity=0.428 Sum_probs=12.1
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
+|+||||+|+..|+.+||++|+++||++
T Consensus 135 ~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 135 DGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 4455555555555555555555555444
No 8
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.31 E-value=5.5e-12 Score=96.69 Aligned_cols=86 Identities=14% Similarity=0.131 Sum_probs=65.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.+. ......+...++....+++.+.. ...||||+|+..|+.+.++ .
T Consensus 33 ~d~~g~t~l~~a~-----~~~~~~~~~~ll~~gad~~~~d~------~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~ 101 (169)
T 4gpm_A 33 SDSDGRTPLHHAA-----ENGHKEVVKLLISKGADVNAKDS------DGRTPLHHAAENGHKEVVKLLISKGADVNAKDS 101 (169)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHhcccchhhhcc------CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC
Confidence 6888999877766 44455555555543333333322 3457999999999999999 6
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++|++...
T Consensus 102 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 131 (169)
T 4gpm_A 102 DGRTPLHHAAENGHKEVVKLLISKGADVNT 131 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 899999999999999999999999998764
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.29 E-value=1.2e-11 Score=89.01 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=68.3
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-----------
Q psy5714 45 SPPLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR----------- 113 (163)
Q Consensus 45 sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk----------- 113 (163)
.|..|..|+++.-.++ ..-++.+...|+.. ..|+... +....|+||+|+..|+.+.++
T Consensus 3 d~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 3 DPFTNHRGETLLHIAS-----IKGDIPSVEYLLQN--GSDPNVK----DHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp -CCCCTTCCCHHHHHH-----HHTCHHHHHHHHHT--TCCSCCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHc--CCCCCcC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 4678999999988887 44455566555543 3333322 123457999999999999998
Q ss_pred --ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 --RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 --r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.+|+||||+|+..|+.++|++|+++|++...
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 5799999999999999999999999998764
No 10
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.28 E-value=1.2e-11 Score=84.08 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=42.4
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSS 141 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~ 141 (163)
..||||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++||+
T Consensus 35 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 35 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 447999999999999998 5799999999999999999999999985
No 11
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.22 E-value=1.7e-11 Score=86.90 Aligned_cols=73 Identities=15% Similarity=0.122 Sum_probs=55.0
Q ss_pred HhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHH
Q psy5714 66 KTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRII 132 (163)
Q Consensus 66 ~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV 132 (163)
+.-++.+...++.. ..|+... +....|+||+|+..|+.+.++ ..|+||||+|+..|+.++|
T Consensus 16 ~~~~~~~v~~ll~~--~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v 89 (123)
T 3aaa_C 16 KNGDLDEVKDYVAK--GEDVNRT----LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 89 (123)
T ss_dssp HTTCHHHHHHHHHT--TCCTTSC----CTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HcCCHHHHHHHHHc--CCCcCcc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 44455555555543 3333222 123457999999999999998 5799999999999999999
Q ss_pred HHHHhCCCCCCC
Q psy5714 133 QILEGSLSSTSS 144 (163)
Q Consensus 133 ~lLl~~GA~~~~ 144 (163)
++|+++|++...
T Consensus 90 ~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 90 KLLLSKGADKTV 101 (123)
T ss_dssp HHHHHTTCCTTC
T ss_pred HHHHHcCCCCCC
Confidence 999999998764
No 12
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.19 E-value=8.1e-11 Score=86.76 Aligned_cols=86 Identities=14% Similarity=0.132 Sum_probs=65.1
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-++.+...|+.....++.+.. ...||||+|+..|+.+.++ .
T Consensus 38 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 106 (165)
T 3twr_A 38 IEGRQSTPLHFAA-----GYNRVSVVEYLLQHGADVHAKDK------GGLVPLHNACSYGHYEVAELLVKHGAVVNVADL 106 (165)
T ss_dssp TTTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cccCCCCHHHHHH-----HcChHHHHHHHHhcCCCCCccCC------CCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC
Confidence 5677888877776 44455566556543333333322 3447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+|+||||+|+..|+.++|++|+++|++...
T Consensus 107 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 107 WKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 799999999999999999999999998764
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.15 E-value=1.1e-10 Score=94.86 Aligned_cols=50 Identities=20% Similarity=0.198 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...||||+||..|+.+.++ ..|+||||+|+..||.++|++|+++||+...
T Consensus 151 ~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 151 SGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp TCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 3457999999999999998 5799999999999999999999999998753
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.15 E-value=1.2e-10 Score=85.25 Aligned_cols=44 Identities=25% Similarity=0.265 Sum_probs=27.3
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSS 141 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~ 141 (163)
|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++
T Consensus 72 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 72 AVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 4666666666666665 3466666666666666666666666654
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.14 E-value=2.5e-10 Score=83.46 Aligned_cols=86 Identities=16% Similarity=0.140 Sum_probs=65.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.+. ..-++.+...|... ..|+... +....||||+|+..|+.+.++ .
T Consensus 30 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 98 (153)
T 1awc_B 30 TDWLGTSPLHLAA-----QYGHFSTTEVLLRA--GVSRDAR----TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM 98 (153)
T ss_dssp CCTTCCCHHHHHH-----HHTCHHHHHHHHTT--TCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHHc--CCCCCCC----CCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC
Confidence 5788998888777 34455555555543 3333222 123457999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++|++...
T Consensus 99 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 99 LKMTALHWATEHNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 799999999999999999999999998764
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.13 E-value=1.4e-10 Score=91.01 Aligned_cols=87 Identities=17% Similarity=0.106 Sum_probs=66.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..+...|+....+++.+... ...||||+|+..|+.+.++ .
T Consensus 154 ~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~-----~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 154 ENYDGHTPLHVAV-----IHKDAEMVRLLRDAGADLNKPEPT-----CGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHHTCCTTCCCTT-----TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCcCHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCC-----CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 6788999887777 444555665665543333333221 2447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+|+||||+|+..|+.++|++|+++||+...
T Consensus 224 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 224 GGRTPLGSALLRPNPILARLLRAHGAPEPE 253 (282)
T ss_dssp TSCCHHHHHHTSSCHHHHHHHHHTTCCCCC
T ss_pred CCCCHHHHHHHcCCcHHHHHHHHcCCCcCc
Confidence 799999999999999999999999999864
No 17
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.13 E-value=1.7e-10 Score=86.45 Aligned_cols=86 Identities=17% Similarity=0.091 Sum_probs=64.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..+...|+....+++.+.. ...|+||+|+..|+.+.++ .
T Consensus 35 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 103 (179)
T 3f6q_A 35 GDDHGFSPLHWAC-----REGRSAVVEMLIMRGARINVMNR------GDDTPLHLAASHGHRDIVQKLLQYKADINAVNE 103 (179)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCcHHHHHHHHHcCCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 5778888877776 44455566555543333333322 3347999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+|+||||+|+..|+.++|++|+++|++...
T Consensus 104 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 104 HGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 799999999999999999999999998753
No 18
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.13 E-value=2e-10 Score=79.84 Aligned_cols=43 Identities=21% Similarity=0.344 Sum_probs=24.2
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLS 140 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA 140 (163)
|+||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++||
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 4555555555555555 245555555555555555555555555
No 19
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.11 E-value=8.4e-11 Score=82.19 Aligned_cols=85 Identities=18% Similarity=0.116 Sum_probs=63.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.++ ..-++.+...|+.. ..|+... +....|+||+|+..|+.+.++ .
T Consensus 5 ~d~~g~t~L~~A~-----~~~~~~~~~~Ll~~--g~~~~~~----d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~ 73 (115)
T 2l6b_A 5 GSKDGNTPLHNAA-----KNGHAEEVKKLLSK--GADVNAR----SKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK 73 (115)
T ss_dssp CSCSSCCHHHHHH-----HHTCHHHHHHHTTT--TCCSSCC----CSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHHc--CCCCCCc----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 4788888887777 33344455444432 2333222 123447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||||+|+..|+.+++++|+++||++.
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 79999999999999999999999999875
No 20
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.10 E-value=6.1e-11 Score=80.55 Aligned_cols=48 Identities=19% Similarity=0.309 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.||||+|+..|+++.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 63 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 47999999999999998 5799999999999999999999999998764
No 21
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.10 E-value=4.2e-10 Score=83.43 Aligned_cols=86 Identities=13% Similarity=-0.068 Sum_probs=64.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.+. ..-+..+...|+.....++.+.. ...|+||+|+..|+.+.++ .
T Consensus 32 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 100 (172)
T 3v30_A 32 PDERGFTPLIWAS-----AFGEIETVRFLLEWGADPHILAK------ERESALSLASTGGYTDIVGLLLERDVDINIYDW 100 (172)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHHTCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCchhhcc------cCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC
Confidence 5788888877776 44455566556543333333322 2347999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++|++...
T Consensus 101 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 101 NGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 799999999999999999999999998764
No 22
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.09 E-value=2.8e-10 Score=84.00 Aligned_cols=86 Identities=16% Similarity=0.020 Sum_probs=64.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-++.+...|+.. ..|+.... ....|+||+|+..|+.+.++ .
T Consensus 32 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--g~~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 100 (167)
T 3v31_A 32 TDEEGFTPLMWAA-----AHGQIAVVEFLLQN--GADPQLLG----KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW 100 (167)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHT--TCCTTCCC----TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT
T ss_pred CCCCCCCHHHHHH-----HCCCHHHHHHHHHc--CCCCCCcC----CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC
Confidence 6788888877776 44455555555543 33333221 12347999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++|++...
T Consensus 101 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 130 (167)
T 3v31_A 101 NGGTPLLYAVHGNHVKCVKMLLESGADPTI 130 (167)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 799999999999999999999999998754
No 23
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.07 E-value=4.2e-10 Score=81.14 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHH
Q psy5714 58 VQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAK 124 (163)
Q Consensus 58 ~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa 124 (163)
...+..-++.-++.+...|+....+++.+.. ...|+||+|+..|+.+.++ ..|+||||+|+
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNAKDE------YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3333444455556666555543223332222 2346899999999988888 56889999999
Q ss_pred HcCCHHHHHHHHhCCCCCCC
Q psy5714 125 TFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 125 ~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+.++|++|+++|++...
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCcC
Confidence 99999999999998887653
No 24
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.06 E-value=8.9e-10 Score=83.20 Aligned_cols=28 Identities=29% Similarity=0.305 Sum_probs=14.5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
.|+||||+|+..|+.++|++|+++|++.
T Consensus 133 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 133 EGETPLIVASKYGRSEIVKKLLELGADI 160 (192)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 3555555555555555555555555544
No 25
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.06 E-value=6.9e-10 Score=82.58 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=62.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.++ +.-++.+...|+....+++.+.. ...|+||+|+..|+.+.++ .
T Consensus 43 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 111 (169)
T 2y1l_E 43 EDASGWTPLHLAA-----FNGHLEIVEVLLKNGADVNAVDH------AGMTPLRLAALFGHLEIVEVLLKNGADVNANDM 111 (169)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 5677888877666 44455555555543222332222 3447999999999999988 4
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++|++...
T Consensus 112 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 112 EGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 699999999999999999999999998753
No 26
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.05 E-value=1.9e-10 Score=89.02 Aligned_cols=86 Identities=14% Similarity=0.028 Sum_probs=65.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------- 113 (163)
.|..|++..-.++ ..-++.+...|+.. ..|+... +....|+||+||..|+++.++
T Consensus 69 ~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d 137 (222)
T 3ehr_A 69 QAESIDNPLHEAA-----KRGNLSWLRECLDN--RVGVNGL----DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN 137 (222)
T ss_dssp HEEEESCHHHHHH-----HHTCHHHHHHHHHT--TCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC
T ss_pred ccccccccccccc-----ccCcHHHHHHHHhC--CCCcccc----CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC
Confidence 5677888777766 44455566555543 3333322 123457999999999999998
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.+|+||||+|+..|+.++|++|+++|++...
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 5799999999999999999999999998764
No 27
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.05 E-value=1.4e-10 Score=83.63 Aligned_cols=85 Identities=11% Similarity=-0.003 Sum_probs=60.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.+. +.-++.+...|+.. ..|+... +....||||+|+. |+.+.++ .
T Consensus 8 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~ 75 (136)
T 1d9s_A 8 LGGSSDAGLATAA-----ARGQVETVRQLLEA--GADPNAL----NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP 75 (136)
T ss_dssp CCCCCSCHHHHHH-----HTTCHHHHHHHHHT--TCCTTCC----CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT
T ss_pred CCCCCccHHHHHH-----HcCCHHHHHHHHHc--CCCcCCc----CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC
Confidence 6778888877776 44455555555543 3333222 1234478999999 9998888 3
Q ss_pred c-CCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 W-GKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~-G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
. |+||||+|+..|+.++|++|+++|++...
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 106 (136)
T 1d9s_A 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV 106 (136)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 5 89999999999999999999999887654
No 28
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.05 E-value=3.7e-10 Score=89.03 Aligned_cols=81 Identities=16% Similarity=0.147 Sum_probs=59.9
Q ss_pred HHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHH
Q psy5714 58 VQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAK 124 (163)
Q Consensus 58 ~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa 124 (163)
...+..-+..-++.+...|+....+++.+. ....||||+||..|+.+.++ ..|+||||+|+
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVDDPSLPN------DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAA 111 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTSSCCCCC------TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 344444445556666655554322333322 23457999999999999999 58999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCC
Q psy5714 125 TFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 125 ~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..||.++|++|+++|++...
T Consensus 112 ~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 112 SCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp HTTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCcce
Confidence 99999999999999998864
No 29
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.05 E-value=6.9e-11 Score=85.30 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=42.8
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSS 141 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~ 141 (163)
..||||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++||+
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 347999999999999999 5899999999999999999999999985
No 30
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.04 E-value=6.4e-10 Score=80.16 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=57.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..+...|+.....++.+.. ...|+||+|+..|+.+.++ .
T Consensus 43 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~d~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 111 (136)
T 2jab_A 43 KDEYGLTPLYLAT-----AHGHLEIVEVLLKNGADVNAVDA------IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111 (136)
T ss_dssp CCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCT------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCcCCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCC
Confidence 5677888877776 34455555555543233332222 3346999999999999888 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSL 139 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~G 139 (163)
.|+||||+|+..|+.+++++|+++|
T Consensus 112 ~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 112 FGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7899999999999999999999876
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.04 E-value=6.2e-10 Score=86.42 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=59.4
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCC--CCcccccchhHHHHHHHHHcCChhhhh------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPR--KHKYSSIGLSIVTLLFNAAAGNISALR------------ 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr--~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------ 113 (163)
.|..|+++.-.++ +.-++.+...|... ..++. ......+....|+||+|+..|+.+.++
T Consensus 74 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 146 (236)
T 1ikn_D 74 RDFRGNTPLHLAC-----EQGCLASVGVLTQS--CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ 146 (236)
T ss_dssp CCTTCCCHHHHHH-----HHTCHHHHHHHHHS--TTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHhc--ccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 5667777766655 33334444444432 11111 001112223457999999999999988
Q ss_pred -c-cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 -R-WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 -r-~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
. .|+||||+|+..|+.++|++|+++|++...
T Consensus 147 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 3 789999999999999999999999998754
No 32
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.03 E-value=6.7e-10 Score=83.87 Aligned_cols=86 Identities=15% Similarity=0.079 Sum_probs=67.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..++..|+.....++.+.. ...|+||+|+..|+.+.++ .
T Consensus 31 ~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (192)
T 2rfm_A 31 RDSYNRTPLMVAC-----MLGMENAIDKLVENFDKLEDKDI------EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF 99 (192)
T ss_dssp CCTTCCCHHHHHH-----HHTCGGGHHHHHHHHCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHHhccccccccc------cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 6889999988877 44466777666654333443322 2447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.+++++|+++|++...
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGANVND 129 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 799999999999999999999999998754
No 33
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.02 E-value=1.5e-09 Score=75.38 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=59.4
Q ss_pred CCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCc
Q psy5714 52 GNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKT 118 (163)
Q Consensus 52 GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~T 118 (163)
|+++.-.+. +.-++.+...+.....+++.+.. ...|+||+|+..|+.+.++ ..|+|
T Consensus 2 g~t~L~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 70 (126)
T 1n0r_A 2 GRTPLHLAA-----RNGHLEVVKLLLEAGADVNAKDK------NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 70 (126)
T ss_dssp CCCHHHHHH-----HHTCHHHHHHHHHHTCCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CccHHHHHH-----HcCcHHHHHHHHHcCCCCCCcCC------CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCc
Confidence 556655555 33445555555543222332222 3447999999999999998 57999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 119 PLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 119 PLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
|||+|+..|+.+++++|+++|++...
T Consensus 71 ~l~~A~~~~~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 71 PLHLAARNGHLEVVKLLLEAGADVNA 96 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCcc
Confidence 99999999999999999999998764
No 34
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.01 E-value=4.9e-10 Score=91.59 Aligned_cols=49 Identities=22% Similarity=0.224 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
.||||+|+..|+.+.++ ..|+||||+|+..||.+||++|+++||+....
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~ 302 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 302 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC
T ss_pred CCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 35777777777777666 45777777777777777777777777766543
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.01 E-value=8.4e-10 Score=87.11 Aligned_cols=49 Identities=20% Similarity=0.152 Sum_probs=38.6
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 157 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 346888888888888877 4688888888888888888888888887653
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.01 E-value=8.7e-10 Score=84.35 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=37.7
Q ss_pred hHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHH-hCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILE-GSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl-~~GA~~~~ 144 (163)
..||||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+ ++|++...
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 346888888888888777 46788888888888888888888 77877653
No 37
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.01 E-value=5.2e-10 Score=84.64 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=56.1
Q ss_pred HHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcC
Q psy5714 62 EELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFK 127 (163)
Q Consensus 62 ~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~G 127 (163)
..-++.-++.+...++. ...++.+. ....||||+|+..|+.+.++ ..|+||||+|+..|
T Consensus 49 ~~A~~~g~~~~v~~Ll~-~~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 49 WTAARKADEQALSQLLE-DRDVDAVD------ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHTTCHHHHHHHTT-TSCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 33335555555555543 22233222 23457999999999999998 46999999999999
Q ss_pred CHHHHHHHHhCCCCCCC
Q psy5714 128 RDRIIQILEGSLSSTSS 144 (163)
Q Consensus 128 h~~vV~lLl~~GA~~~~ 144 (163)
+.++|++|+++|++...
T Consensus 122 ~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 122 RPEVVEALVELGADIEV 138 (183)
T ss_dssp CHHHHHHHHHHTCCTTC
T ss_pred cHHHHHHHHHcCCCCcC
Confidence 99999999999998763
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.00 E-value=1.2e-09 Score=84.06 Aligned_cols=49 Identities=16% Similarity=0.132 Sum_probs=42.5
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..||||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 346999999999999988 4789999999999999999999999988753
No 39
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.00 E-value=1e-09 Score=92.58 Aligned_cols=85 Identities=18% Similarity=0.186 Sum_probs=58.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------cc
Q psy5714 49 DALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RW 115 (163)
Q Consensus 49 D~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~ 115 (163)
|..|.+..-.+. +.-+..+.+.|......++.+.. ...||||+|+..|+++.++ .+
T Consensus 275 ~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~ 343 (437)
T 1n11_A 275 NKSGLTPLHLVA-----QEGHVPVADVLIKHGVMVDATTR------MGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL 343 (437)
T ss_dssp CTTCCCHHHHHH-----HHTCHHHHHHHHHHTCCTTCCCS------SCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCCCHHHHHH-----HcCCHHHHHHHHhCCccCCCCCC------CCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCC
Confidence 444555444443 33344444445443344444433 2347999999999999988 57
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
|+||||+|+..||.++|++|+++||+...
T Consensus 344 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 344 GYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 99999999999999999999999998764
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.99 E-value=1.1e-09 Score=86.89 Aligned_cols=46 Identities=11% Similarity=0.165 Sum_probs=35.9
Q ss_pred HHHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
||||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++..
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 136 TPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6777777777777777 467888888888888888888888887765
No 41
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.99 E-value=1.4e-09 Score=87.50 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=65.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ +.-++.+...|+....+++.+.. ...||||+|+..|+.+.++ .
T Consensus 54 ~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 122 (351)
T 3utm_A 54 SDGRKSTPLHLAA-----GYNRVRIVQLLLQHGADVHAKDK------GGLVPLHNACSYGHYEVTELLLKHGACVNAMDL 122 (351)
T ss_dssp SSTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCC------CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 5788899888777 44456666666553333333322 3447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+|+||||+|+..|+.++|++|+++|++...
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 123 WQFTPLHEAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 799999999999999999999999998764
No 42
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.98 E-value=1.4e-09 Score=84.79 Aligned_cols=49 Identities=22% Similarity=0.224 Sum_probs=43.9
Q ss_pred hHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..||||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++||+...
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 347999999999999988 5799999999999999999999999998875
No 43
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.97 E-value=5.8e-10 Score=81.47 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=58.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------- 113 (163)
.|..|+++.-.+. +.-++.+...|... ..|+... +....||||+|+..|+.+.++
T Consensus 66 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 134 (162)
T 1ihb_A 66 KDRTGFAVIHDAA-----RAGFLDTLQTLLEF--QADVNIE----DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN 134 (162)
T ss_dssp CCTTSCCHHHHHH-----HHTCHHHHHHHHHT--TCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHHc--CCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC
Confidence 4566666665555 33344555555543 3343332 123457999999999999999
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSS 141 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~ 141 (163)
..|+||||+|+..||.+++++|+++||+
T Consensus 135 ~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 135 HKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 4799999999999999999999999985
No 44
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.97 E-value=1.8e-09 Score=82.99 Aligned_cols=48 Identities=25% Similarity=0.192 Sum_probs=37.5
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++..
T Consensus 139 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 139 DATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 346788888888877777 467888888888888888888888888765
No 45
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.97 E-value=4.4e-10 Score=82.78 Aligned_cols=50 Identities=20% Similarity=0.405 Sum_probs=40.8
Q ss_pred hHH-HHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 96 SIV-TLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 96 ~~~-~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
..| |||+|+..|+.+.++ .+|+||||+|+..|+.++|++|+++|++....
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 335 999999999999999 57999999999999999999999999988653
No 46
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.97 E-value=1e-09 Score=89.80 Aligned_cols=88 Identities=20% Similarity=0.258 Sum_probs=62.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------cc
Q psy5714 49 DALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RW 115 (163)
Q Consensus 49 D~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~ 115 (163)
|..|++..-.+.... ..-++.+...|+..+..++.+.. ...||||+||..|+.+.++ ..
T Consensus 166 ~~~g~t~Lh~A~~~~--~~~~~~~v~~Ll~~ga~in~~d~------~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~ 237 (278)
T 1dcq_A 166 HEPDETALHLAVRSV--DRTSLHIVDFLVQNSGNLDKQTG------KGSTALHYCCLTDNAECLKLLLRGKASIEIANES 237 (278)
T ss_dssp SSTTCBHHHHHHHHC--CTTTHHHHHHHHHHCSCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ccCCCCcchHHHHhc--ccchHHHHHHHHHCCCCccccCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCC
Confidence 677888877777320 00234444445543333443322 3447999999999999998 58
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
|+||||+|+..||.++|++|+++|+....
T Consensus 238 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 238 GETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999986543
No 47
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.97 E-value=4.4e-10 Score=83.28 Aligned_cols=86 Identities=15% Similarity=0.099 Sum_probs=65.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.++ ..-+..+...|......++.+.. ...||||+|+..|+.+.++ .
T Consensus 65 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 65 LAKERESALSLAS-----TGGYTDIVGLLLERDVDINIYDW------NGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp CCTTCCCHHHHHH-----HTTCHHHHHHHHTTTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hcccCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 5778888877666 44455555555543333333322 3447999999999999999 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.+++++|+++|++...
T Consensus 134 ~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 134 SGYTPMDLAVALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHhCcHHHHHHHHHHHHHHhc
Confidence 799999999999999999999999987654
No 48
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.97 E-value=1.2e-09 Score=76.60 Aligned_cols=52 Identities=23% Similarity=0.164 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 93 IGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 93 ~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+.+..|+||+|+..|+++.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~ 85 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA 85 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 445668999999999999998 5799999999999999999999999998764
No 49
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.97 E-value=1.9e-09 Score=82.39 Aligned_cols=47 Identities=21% Similarity=0.169 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||+|+..|+.+.++ .+|+||||+|+..|+.++|++|+++|++..
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 185 (223)
T 2f8y_A 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185 (223)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 35777777777777777 467777777777777777777777777664
No 50
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.96 E-value=9.3e-10 Score=87.51 Aligned_cols=81 Identities=19% Similarity=0.083 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------ccCCcHHHH
Q psy5714 57 GVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR--------------RWGKTPLDE 122 (163)
Q Consensus 57 g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~ 122 (163)
|...+..-++.-++.+...|+. ..|+... +....||||+|+..|+.+.++ ..|+||||+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE---DRDVDAV----DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT---TCCTTCB----CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHc---CCCCCCc----CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 3334444445545555544443 2233222 223557999999999999999 459999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCC
Q psy5714 123 AKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 123 Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
|+..||.++|++|+++|++...
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~~~ 139 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADIEV 139 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999998764
No 51
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.96 E-value=1.2e-09 Score=85.76 Aligned_cols=86 Identities=19% Similarity=0.127 Sum_probs=66.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhcc---CCCCCCcccccchhHHHHHHHHHcCChhhhh-----------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANK---IDPRKHKYSSIGLSIVTLLFNAAAGNISALR----------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~k---idpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk----------- 113 (163)
.|..|+++.-.++ +.-+..+...|+..... ++.+.. ...||||+||..|+++.++
T Consensus 5 ~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 73 (282)
T 1oy3_D 5 VTEDGDTALHLAV-----IHQHEPFLDFLLGFSAGHEYLDLQND------LGQTALHLAAILGEASTVEKLYAAGAGVLV 73 (282)
T ss_dssp CCTTCCCHHHHHH-----HTTCHHHHHHHHHHHTTSGGGGCCCT------TSCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred cCCCCCcHHHHHH-----HcCCHHHHHHHHhcCCCcccccccCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 6889999988887 44455666666543222 333322 3447999999999999999
Q ss_pred --ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 --RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 --r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..|+.++|++|+++|+....
T Consensus 74 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~ 106 (282)
T 1oy3_D 74 AERGGHTALHLACRVRAHTCACVLLQPRPSHPR 106 (282)
T ss_dssp CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCC
T ss_pred CCCCCCCHHHHHHHcCCcchhHhhhccCCCCch
Confidence 5799999999999999999999999987553
No 52
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.96 E-value=2.2e-09 Score=85.05 Aligned_cols=78 Identities=17% Similarity=0.049 Sum_probs=58.8
Q ss_pred HHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcC
Q psy5714 61 CEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFK 127 (163)
Q Consensus 61 ~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~G 127 (163)
+..-++.-++.+...|+....+++.+.. ...||||+|+..|+++.++ ..|+||||+|+..|
T Consensus 25 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~------~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKEMNDPSQPNE------EGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCN 98 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHHSSCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 3333355566666666653333333222 3457999999999999999 57999999999999
Q ss_pred CHHHHHHHHhCCCCCCC
Q psy5714 128 RDRIIQILEGSLSSTSS 144 (163)
Q Consensus 128 h~~vV~lLl~~GA~~~~ 144 (163)
+.++|++|+++|++...
T Consensus 99 ~~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 99 DTVICMALVQHGAAIFA 115 (229)
T ss_dssp CHHHHHHHHTTTCCTTC
T ss_pred CHHHHHHHHHcCCCccc
Confidence 99999999999998764
No 53
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.96 E-value=9.6e-10 Score=96.45 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=63.9
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 47 PLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 47 ~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
.-|..|.+.+-.+... +..-++.+...|+..+.++|.+.. ...||||+||..|+.+.++
T Consensus 166 ~~~~~g~t~Lh~A~~~--a~~g~~~~v~~Ll~~ga~vn~~d~------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 237 (497)
T 3lvq_E 166 DAQAPEELVLHLAVKV--ANQASLPLVDFIIQNGGHLDAKAA------DGNTALHYAALYNQPDCLKLLLKGRALVGTVN 237 (497)
T ss_dssp SSCCSCBCHHHHHHHT--CCTTTHHHHHHHHHHSCCTTCCCS------SSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCC
T ss_pred ccccccchHHHHHHHh--cccccHHHHHHHHHcCCCCCccCC------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 3578899988777520 012234444455544444444433 3447999999999999999
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCchh
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAEDSED 150 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~~~~ 150 (163)
..|+||||+|+..||.+++++|+++||+...+|.+.+
T Consensus 238 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~ 274 (497)
T 3lvq_E 238 EAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVD 274 (497)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTCC----------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceee
Confidence 6899999999999999999999999999998877644
No 54
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.96 E-value=1.7e-09 Score=86.12 Aligned_cols=49 Identities=27% Similarity=0.315 Sum_probs=45.0
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||+||..|+.+.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 447999999999999999 5899999999999999999999999998753
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.96 E-value=1.9e-09 Score=78.43 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=58.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-. . ..-+..+...|... ..|+... +....||||+|+..|+.+.++ .
T Consensus 32 ~~~~g~t~L~~-~-----~~~~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (156)
T 1bd8_A 32 LNRFGKTALQV-M-----MFGSTAIALELLKQ--GASPNVQ----DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG 99 (156)
T ss_dssp CCTTSCCHHHH-S-----CTTCHHHHHHHHHT--TCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred cCCCCCcHHHH-H-----HcCCHHHHHHHHHC--CCCCCCc----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC
Confidence 57778877655 3 33344444444443 3333322 123447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++ ++...
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~ 128 (156)
T 1bd8_A 100 TGALPIHLAVQEGHTAVVSFLAAE-SDLHR 128 (156)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHTT-SCTTC
T ss_pred CCCcHHHHHHHhChHHHHHHHHhc-cCCCC
Confidence 799999999999999999999988 66543
No 56
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.95 E-value=1.8e-09 Score=78.61 Aligned_cols=40 Identities=23% Similarity=0.416 Sum_probs=19.7
Q ss_pred HHHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCHHHHHHHHh
Q psy5714 98 VTLLFNAAAGNISALR------------RWGKTPLDEAKTFKRDRIIQILEG 137 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~~vV~lLl~ 137 (163)
||||+|+..|+.+.++ .+|+||||+|+..|+.++|++|++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 103 LPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 3555555555554444 244555555555555555555544
No 57
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.94 E-value=2.8e-09 Score=81.42 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=60.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..+...|+.. ..|+... +....||||+|+..|+.+.++ .
T Consensus 121 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 189 (223)
T 2f8y_A 121 VDDLGKSALHWAA-----AVNNVDAAVVLLKN--GANKDMQ----NNREETPLFLAAREGSYETAKVLLDHFANRDITDH 189 (223)
T ss_dssp BCTTSCBHHHHHH-----HTTCHHHHHHHHHT--TCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCcHHHHHH-----HcCCHHHHHHHHHc--CCCCCCc----CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 3555666655554 23334444444432 3333322 123447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+|+||||+|+..||.+++++|+++|+...
T Consensus 190 ~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 190 MDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred cCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 79999999999999999999999999765
No 58
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.94 E-value=1.4e-09 Score=88.79 Aligned_cols=51 Identities=18% Similarity=0.205 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
+..|+||.|+.+||++.|+ ..|+||||+|+..||.+||++|+++||+....
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~ 88 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 88 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhh
Confidence 3568999999999999999 35999999999999999999999999987643
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.93 E-value=2.1e-09 Score=84.40 Aligned_cols=95 Identities=13% Similarity=0.034 Sum_probs=66.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCC-----CcccccchhHHHHHHHHHcCChhhhh---------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRK-----HKYSSIGLSIVTLLFNAAAGNISALR--------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~-----~~~e~~~~~~~~L~~AA~~Gdl~~vk--------- 113 (163)
.|..|+++.-.++.. .+.-+..+...|+....+++... ...+.+....||||+|+..|+++.++
T Consensus 39 ~d~~g~t~L~~A~~~--~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 116 (256)
T 2etb_A 39 EGSTGKTCLMKAVLN--LQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV 116 (256)
T ss_dssp BTTTTBCHHHHHHHT--CBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCHHHHHHHc--cccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 488999998888732 00145666666665433332111 01111224568999999999999999
Q ss_pred ----cc-------------CCcHHHHHHHcCCHHHHHHHHh---CCCCCCC
Q psy5714 114 ----RW-------------GKTPLDEAKTFKRDRIIQILEG---SLSSTSS 144 (163)
Q Consensus 114 ----r~-------------G~TPLh~Aa~~Gh~~vV~lLl~---~GA~~~~ 144 (163)
.. |+||||+|+..|+.++|++|++ +|++...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~ 167 (256)
T 2etb_A 117 HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA 167 (256)
T ss_dssp TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc
Confidence 11 9999999999999999999999 8998764
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.93 E-value=3.3e-09 Score=79.81 Aligned_cols=84 Identities=18% Similarity=0.191 Sum_probs=52.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------- 113 (163)
.|..|+++.-.++ +.-++.+...|+....+++.+.. ...||||+|+..|+.+.++
T Consensus 35 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~------~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 103 (201)
T 3hra_A 35 VDTEGNTPLNIAV-----HNNDIEIAKALIDRGADINLQNS------ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN 103 (201)
T ss_dssp CCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHhccCccccccc
Confidence 5777888877766 34455555555543222332222 2235777777777777776
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCC-CCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSL-SST 142 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~G-A~~ 142 (163)
.+|+||||+|+..|+.++|++|+++| ++.
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 133 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGREDI 133 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCCCT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 45777777777777777777777776 443
No 61
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.93 E-value=2.4e-09 Score=82.52 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=37.9
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 145 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 145 NICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp CCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc
Confidence 36888888888888777 4688888888888888888888888887653
No 62
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.93 E-value=7.8e-10 Score=91.59 Aligned_cols=97 Identities=16% Similarity=0.096 Sum_probs=67.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
-|..|++++-.++... ..-++.+.+.|+....+++.+.. ...||||+|+..|+.+.++ .
T Consensus 186 ~~~~g~t~Lh~A~~~~--~~~~~~iv~~Ll~~gadvn~~d~------~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 257 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVA--NQASLPLVDFIIQNGGHLDAKAA------DGNTALHYAALYNQPDCLKLLLKGRALVGTVNE 257 (301)
T ss_dssp SCSCEECHHHHHHHTC--CTTTHHHHHHHHHHSSCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCT
T ss_pred cCCCCccHHHHHHHhc--ccCcHHHHHHHHhcCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 4778888877766210 01233444444443333443322 3447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCchhhh
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSSAEDSEDES 152 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~~~~~~ 152 (163)
.|+||||+|+..||.+||++|+++|++...+|.+-+..
T Consensus 258 ~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~tpLh~A~~ 295 (301)
T 2b0o_E 258 AGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYS 295 (301)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHHHHTTSSCCC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCCCChhHHHHh
Confidence 79999999999999999999999999988888876654
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.93 E-value=3.1e-09 Score=79.03 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=60.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|++..-.++ ..-+..+...|.....+++.+.. ...|+||+|+..|+.+.++ .
T Consensus 76 ~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 76 VDHAGMTPLRLAA-----LFGHLEIVEVLLKNGADVNANDM------EGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 5778888877766 44455566555543333333222 3447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSL 139 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~G 139 (163)
.|+||||+|+..|+.+++++|+++|
T Consensus 145 ~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 145 FGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 7999999999999999999999986
No 64
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.93 E-value=1.1e-09 Score=87.23 Aligned_cols=86 Identities=12% Similarity=0.013 Sum_probs=61.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.+..|+++.-.++ ..-++.+...|+.....++.+.. ...||||+|+..|+++.++ .
T Consensus 36 ~~~~~~t~l~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 104 (299)
T 1s70_B 36 VKFDDGAVFLAAC-----SSGDTEEVLRLLERGADINYANV------DGLTALHQACIDDNVDMVKFLVENGANINQPDN 104 (299)
T ss_dssp CEECHHHHHHHHH-----HHTCHHHHHHHHHHCCCTTCBCT------TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cccCCccHHHHHH-----HcCCHHHHHHHHHcCCCCcccCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 3344444444444 55566666666543333333222 3447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..||.++|++|+++|++...
T Consensus 105 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 134 (299)
T 1s70_B 105 EGWIPLHAAASCGYLDIAEYLISQGAHVGA 134 (299)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 699999999999999999999999998754
No 65
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.92 E-value=2e-09 Score=86.58 Aligned_cols=86 Identities=12% Similarity=0.057 Sum_probs=61.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcC---CcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-----------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFN---FHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR----------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~---l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk----------- 113 (163)
.+..|++..-.++ .... ..+...|.....+++.+.. ...||||+|+..|+.+.++
T Consensus 207 ~~~~~~t~L~~A~-----~~~~~~~~~~~~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~ 275 (351)
T 3utm_A 207 QPQSHETALHCAV-----ASLHPKRKQVAELLLRKGANVNEKNK------DFMTPLHVAAERAHNDVMEVLHKHGAKMNA 275 (351)
T ss_dssp CTTTCCCHHHHHH-----HCCSTTHHHHHHHHHHTTCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHH-----HHhCccHHHHHHHHHHcCCCcCCcCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 5677788776665 2221 1233333332233333332 3447999999999999999
Q ss_pred --ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 --RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 --r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..||.++|++|+++|++...
T Consensus 276 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 276 LDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 5799999999999999999999999998764
No 66
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.92 E-value=1.7e-09 Score=91.15 Aligned_cols=85 Identities=15% Similarity=0.073 Sum_probs=55.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|+.|.++.-.+. ..-++.+...|+.....++.+.. ...|+||+||..|+++.++ .
T Consensus 10 ~~~~g~t~L~~Aa-----~~g~~~~v~~Ll~~g~~~~~~~~------~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 78 (437)
T 1n11_A 10 GGESGLTPLHVAS-----FMGHLPIVKNLLQRGASPNVSNV------KVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK 78 (437)
T ss_dssp -----CCHHHHHH-----HHTCHHHHHHHHHTTCCSCCSSS------CCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT
T ss_pred cCCCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Confidence 5677888877776 44456666556543222332222 2336888888888888888 4
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+|+||||+|+..||.++|++|+++|++..
T Consensus 79 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 107 (437)
T 1n11_A 79 DDQTPLHCAARIGHTNMVKLLLENNANPN 107 (437)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhCCCCCC
Confidence 68888888888888888888888888654
No 67
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.92 E-value=3.6e-09 Score=85.58 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=32.2
Q ss_pred HHHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++..
T Consensus 192 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 249 (285)
T 3d9h_A 192 TPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQ 249 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 5777777777777666 456777777777777777777777777654
No 68
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.92 E-value=1.5e-09 Score=76.81 Aligned_cols=49 Identities=14% Similarity=0.243 Sum_probs=44.9
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..++||+|+..|+++.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 68 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 447999999999999998 4799999999999999999999999998754
No 69
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.91 E-value=1.3e-09 Score=89.92 Aligned_cols=86 Identities=10% Similarity=-0.031 Sum_probs=59.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhc--CCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTF--NFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------ 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l--~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------ 113 (163)
.|..|.+..-.++ ..- ++.+...|+....+++.+.. ...|+||+|+..|+.+.++
T Consensus 134 ~~~~g~t~L~~A~-----~~g~~~~~~v~~Ll~~ga~~~~~d~------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 202 (364)
T 3ljn_A 134 KHCKGQTALHWCV-----GLGPEYLEMIKILVQLGASPTAKDK------ADETPLMRAMEFRNREALDLMMDTVPSKSSL 202 (364)
T ss_dssp EEESCCCHHHHHH-----HSCGGGHHHHHHHHHHTCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSC
T ss_pred CCCCCCCHHHHHH-----HcCCchHHHHHHHHHcCCCCcccCC------CCCCHHHHHHHcCCHHHHHHHHhcccccccc
Confidence 5677888877766 333 34455555543333333322 3346889999888888887
Q ss_pred ------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 ------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 ------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..||.++|++|+++|++...
T Consensus 203 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 203 RLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp CTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 3688899999888899999998888888753
No 70
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.90 E-value=3.9e-09 Score=81.32 Aligned_cols=83 Identities=17% Similarity=0.047 Sum_probs=59.2
Q ss_pred CCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh------------------
Q psy5714 52 GNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------------ 113 (163)
Q Consensus 52 GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------------ 113 (163)
|++..-.++ +.-++.+...++.. ...|+... +....||||+|+..|+.+.++
T Consensus 3 g~t~L~~A~-----~~g~~~~v~~Ll~~-~g~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 72 (232)
T 2rfa_A 3 WESPLLLAA-----KENDVQALSKLLKF-EGCEVHQR----GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL 72 (232)
T ss_dssp TTCHHHHHH-----HTTCHHHHHHHHTT-TCSCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHHh-cCCCcccC----CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC
Confidence 455555554 44445555445432 13333322 223457999999999999998
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..|+.++|++|+++|++...
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 103 (232)
T 2rfa_A 73 YEGQTALHIAVINQNVNLVRALLARGASVSA 103 (232)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCc
Confidence 2699999999999999999999999998765
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.90 E-value=5.1e-09 Score=76.96 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=45.1
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||+|+..|+.+.++ .+|+||||+|+..|+.++|++|+++|++...
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 103 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103 (165)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCC
Confidence 447999999999999999 5799999999999999999999999998764
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.89 E-value=3e-09 Score=79.58 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=45.1
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 100 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 100 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 447999999999999998 5799999999999999999999999998754
No 73
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.89 E-value=3e-09 Score=83.94 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||+|+..|+.+.++ ..|+||||+|+..|+.++|++|+++|++..
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 184 (253)
T 1yyh_A 125 TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD 184 (253)
T ss_dssp CCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 35777777777777766 457888888888888888888888887765
No 74
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.89 E-value=5e-09 Score=84.98 Aligned_cols=86 Identities=17% Similarity=0.073 Sum_probs=66.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..+...|+....+++.+.. ...|++++|+..++.+.++ .
T Consensus 82 ~d~~G~TpLh~A~-----~~g~~~~v~~Ll~~~a~~~~~~~------~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~ 150 (269)
T 4b93_B 82 TSQDGSSPLHVAA-----LHGRADLIPLLLKHGANAGARNA------DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL 150 (269)
T ss_dssp CCTTSCCHHHHHH-----HTTCTTHHHHHHHTTCCTTCCCT------TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred cCCCCCCHHHHHH-----HcCcHHHHHHHHhcCCCcCccCC------CCCCccccccccChHHHHHHHHHCCCCCCCCCC
Confidence 6888999887776 45566677666653333333322 3447999999999999988 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..|+.++|++|+++|+++..
T Consensus 151 ~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 151 SGNTPLIYACSGGHHELVALLLQHGASINA 180 (269)
T ss_dssp TCCCHHHHHHHTTCGGGHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCc
Confidence 799999999999999999999999998753
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.88 E-value=6.1e-10 Score=90.06 Aligned_cols=49 Identities=18% Similarity=0.206 Sum_probs=44.5
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHh-CCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEG-SLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~-~GA~~~~ 144 (163)
..||||+|+..|+.+.++ ..|+||||+|+..|+.++|++|++ +|++...
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC
Confidence 457999999999999998 689999999999999999999999 8988764
No 76
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.88 E-value=4.3e-09 Score=77.52 Aligned_cols=49 Identities=18% Similarity=0.247 Sum_probs=45.0
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||+|+..|+++.++ .+|+||||+|+..|+.++|++|+++|++...
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 97 (167)
T 3v31_A 36 GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97 (167)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 447999999999999998 5799999999999999999999999998764
No 77
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.88 E-value=1.9e-09 Score=83.67 Aligned_cols=87 Identities=13% Similarity=0.026 Sum_probs=65.1
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 47 PLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 47 ~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
..|..|++..-.++ ..-+..+...|+.....++.+.. ....||||+|+..|+.+.++
T Consensus 112 ~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~-----~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 181 (236)
T 1ikn_D 112 ATNYNGHTCLHLAS-----IHGYLGIVELLVSLGADVNAQEP-----CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 181 (236)
T ss_dssp CCCTTCCCHHHHHH-----HTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC
T ss_pred ccCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCC-----CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 35677888887776 44455556556543333333322 12347999999999999999
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..|+||||+|+..|+.+++++|+++||+..
T Consensus 182 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 182 YQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp TTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 589999999999999999999999999653
No 78
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.87 E-value=8.5e-09 Score=79.15 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||+|+..|+.+.++ .+|+||||+|+..|+.+++++|+++|++..
T Consensus 107 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 166 (231)
T 3aji_A 107 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166 (231)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Confidence 35777777777777766 357777777777777777777777777654
No 79
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.87 E-value=7.9e-09 Score=82.01 Aligned_cols=29 Identities=21% Similarity=0.035 Sum_probs=14.8
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||||+|+..|+.++|++|+++|++..
T Consensus 133 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 133 HLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 34455555555555555555555555443
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.87 E-value=2.8e-09 Score=84.62 Aligned_cols=86 Identities=14% Similarity=0.023 Sum_probs=59.4
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcchhhhHhhh-ccCCCCCCcccccchhHHHHHHHHHcCC---------hhhhh------
Q psy5714 50 ALGNSCRGVQFCEELVKTFNFHKYDNLRYAA-NKIDPRKHKYSSIGLSIVTLLFNAAAGN---------ISALR------ 113 (163)
Q Consensus 50 ~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~-~kidpr~~~~e~~~~~~~~L~~AA~~Gd---------l~~vk------ 113 (163)
..|.+..-.++ ..-+..+...|+... ...|+... +....||||+|+..|+ .+.++
T Consensus 146 ~~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~gad~~~~----d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g 216 (273)
T 2pnn_A 146 YFGELPLSLAA-----CTNQLAIVKFLLQNSWQPADISAR----DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG 216 (273)
T ss_dssp CSCBSHHHHHH-----HTTCHHHHHHHHHCSSCCCCTTCC----CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHH-----HcCCHHHHHHHHhcccCCCCceee----CCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh
Confidence 47888887776 444555665565410 23343322 1234479999999998 55444
Q ss_pred --------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 --------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 --------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..||.+||++|+++||.-+.
T Consensus 217 a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 217 AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---
T ss_pred hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCch
Confidence 4799999999999999999999999995443
No 81
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.87 E-value=4.6e-09 Score=85.88 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHc---CChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAA---GNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~---Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...||||+||.. |+++.++ ..|+||||+|+..||.++|++|+++||+...
T Consensus 168 ~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 233 (278)
T 1dcq_A 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 233 (278)
T ss_dssp TTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 456899999999 8889888 5799999999999999999999999998764
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.86 E-value=1.1e-09 Score=80.60 Aligned_cols=85 Identities=9% Similarity=-0.032 Sum_probs=61.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
-++.|++..-.+. +.-++.+...|+.. ..|+.... ....|+||+|+ .|+.+.++ .
T Consensus 8 ~~~~~~t~L~~A~-----~~g~~~~v~~Ll~~--g~~~~~~~----~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~ 75 (156)
T 1bi7_B 8 SMEPSADWLATAA-----ARGRVEEVRALLEA--GANPNAPN----SYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP 75 (156)
T ss_dssp --CCSTTHHHHHH-----HHTCHHHHHHHHTT--TCCTTCCC----SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT
T ss_pred CCccchHHHHHHH-----HcCCHHHHHHHHHc--CCCCCCCC----CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC
Confidence 4677888877776 44455555555543 33333221 13447999985 89999998 5
Q ss_pred cCCc-HHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKT-PLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~T-PLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+| |||+|+..|+.++|++|+++|++...
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~ 106 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV 106 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc
Confidence 7999 99999999999999999999998764
No 83
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.86 E-value=1.3e-09 Score=85.67 Aligned_cols=89 Identities=17% Similarity=0.044 Sum_probs=61.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcchhhhHhhh-ccCCCCCCcccccchhHHHHHHHHHcCC---------hhhhh------
Q psy5714 50 ALGNSCRGVQFCEELVKTFNFHKYDNLRYAA-NKIDPRKHKYSSIGLSIVTLLFNAAAGN---------ISALR------ 113 (163)
Q Consensus 50 ~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~-~kidpr~~~~e~~~~~~~~L~~AA~~Gd---------l~~vk------ 113 (163)
..|.+..-.++ ..-+..+...|+... ...|+... +....||||+|+..|+ .+.++
T Consensus 138 ~~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~ga~~~~~----d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g 208 (260)
T 3jxi_A 138 YFGELPLSLAA-----CTNQPHIVHYLTENGHKQADLRRQ----DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC 208 (260)
T ss_dssp CSCSSHHHHHH-----HTTCHHHHHHHHHCSSCCCCTTCC----CTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHH-----HcCCHHHHHHHHhccccCCCCccc----CCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC
Confidence 57888887776 444555665565410 23344322 1234579999999888 45544
Q ss_pred --------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy5714 114 --------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSAED 147 (163)
Q Consensus 114 --------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~~~ 147 (163)
..|+||||+|+..||.++|++|+++|+.....++
T Consensus 209 a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 256 (260)
T 3jxi_A 209 AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHH 256 (260)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC---
T ss_pred cccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccc
Confidence 4799999999999999999999999987765544
No 84
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.86 E-value=6e-09 Score=79.65 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=39.6
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCC-CCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSL-SSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~G-A~~~ 143 (163)
..|+||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++| ++..
T Consensus 107 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 168 (228)
T 2dzn_A 107 GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN 168 (228)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC
T ss_pred CCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc
Confidence 446888888888888888 46889999999999999999999888 6554
No 85
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.86 E-value=2e-09 Score=77.21 Aligned_cols=49 Identities=20% Similarity=0.287 Sum_probs=44.9
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
..|+||+|+..|+++.++ ..|+||||+|+..|+.+++++|+++|++...
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 447999999999999998 5799999999999999999999999998764
No 86
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.86 E-value=6.8e-09 Score=79.94 Aligned_cols=48 Identities=19% Similarity=0.140 Sum_probs=44.1
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHH----HHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRII----QILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV----~lLl~~GA~~~ 143 (163)
..|+||+|+..|+.+.++ ..|+||||+|+..|+.+++ ++|+++|++..
T Consensus 121 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 121 GEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 557999999999999999 5799999999999999998 99999999764
No 87
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.86 E-value=6.1e-09 Score=82.64 Aligned_cols=98 Identities=13% Similarity=0.049 Sum_probs=65.8
Q ss_pred eecCCCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhh--hccCCCCCCcccccchhHHHHHHHHHc---CChhhhh----
Q psy5714 43 LFSPPLDALGNSCRGVQFCEELVKTFNFHKYDNLRYA--ANKIDPRKHKYSSIGLSIVTLLFNAAA---GNISALR---- 113 (163)
Q Consensus 43 ~~sP~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~--~~kidpr~~~~e~~~~~~~~L~~AA~~---Gdl~~vk---- 113 (163)
...+..|..|++..-.++ +.-++.+...|+.. ....+........+....|+||+|+.. |+.+.++
T Consensus 4 a~~~~~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~ 78 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAV-----AQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLD 78 (273)
T ss_dssp -------CCCHHHHHHHH-----HTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHH
T ss_pred ccCCCCCcccchHHHHHH-----HcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHH
Confidence 344557888888877776 66677777766542 122222111111123455899999987 9999988
Q ss_pred --------------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 114 --------------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 114 --------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
..|+||||+|+..|+.++|++|+++|++....
T Consensus 79 ~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 79 VARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp HHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred hhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 16999999999999999999999999987643
No 88
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.85 E-value=1.6e-09 Score=75.64 Aligned_cols=48 Identities=21% Similarity=0.254 Sum_probs=44.4
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
..|+||+|+..|+++.++ ..|+||||+|+..|+.+++++|+++|++..
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 69 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 447999999999999999 579999999999999999999999999875
No 89
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.85 E-value=5.5e-09 Score=84.47 Aligned_cols=85 Identities=14% Similarity=-0.078 Sum_probs=54.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
-|..|++..-.++ ..-+..+...|+.....++.+.. ...||||+|+..|+++.++ .
T Consensus 55 ~~~~g~t~L~~Aa-----~~g~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 123 (285)
T 3d9h_A 55 DAVSDWSPMHEAA-----IHGHQLSLRNLISQGWAVNIITA------DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 123 (285)
T ss_dssp SSCCSCCHHHHHH-----HTTCHHHHHHHHHTTCCSCEECT------TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred CCccCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCcCC------CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 6788888877776 33344444444432222222221 2346888888888888877 4
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
.|+||||+|+..|+.++|++|+++|++..
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 152 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQ 152 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCC
Confidence 67777777777777777777777777654
No 90
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.85 E-value=3.4e-09 Score=74.37 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=54.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
+|..|++..-.++ ..-++.+...|+.....++.+.. ...|+||+|+..|+++.++ .
T Consensus 20 ~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~i~~~d~------~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 20 MGSDLGKKLLEAA-----RAGQDDEVRILMANGADVAAKDK------NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp --CCHHHHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCccchHHHHHH-----HcCCHHHHHHHHHcCCCCCccCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 6666666655555 44455566555543233333222 3447999999999999998 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHH
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILE 136 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl 136 (163)
.|+||||+|+..|+.+++++|.
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEILQ 110 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHC
T ss_pred CCCcHHHHHHHcCCHHHHHHhC
Confidence 7999999999999999999983
No 91
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.85 E-value=7.1e-09 Score=79.67 Aligned_cols=44 Identities=20% Similarity=0.169 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy5714 97 IVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLS 140 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA 140 (163)
.|+||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++++
T Consensus 47 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA 103 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 35666666666666666 356666666666666666666666655
No 92
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.84 E-value=3.2e-09 Score=87.58 Aligned_cols=84 Identities=10% Similarity=-0.107 Sum_probs=64.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhcc-----CCCCCCcccccchhHHHHHHHHHcCChhhhh---------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANK-----IDPRKHKYSSIGLSIVTLLFNAAAGNISALR--------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~k-----idpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk--------- 113 (163)
.|..|.+..-.++ +.-+..+...|+..... ++.+.. ...|+||+||..|+.+.++
T Consensus 169 ~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 169 KDKADETPLMRAM-----EFRNREALDLMMDTVPSKSSLRLDYANK------QGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHHCSCSSSCCTTCCCT------TCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHhcccccccccccccCC------CCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 6788888887776 44455666666543222 333322 3447999999999999999
Q ss_pred ----ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 114 ----RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 114 ----r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
..|+||||+|+..||.++|++|+++|+..
T Consensus 238 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 238 NMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 68999999999999999999999998764
No 93
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.84 E-value=6.5e-09 Score=79.23 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=29.9
Q ss_pred HHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
|+||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++|++..
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence 4666666666666666 346666666666666666666666666554
No 94
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.83 E-value=2.1e-09 Score=87.08 Aligned_cols=82 Identities=15% Similarity=-0.001 Sum_probs=41.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ +.-++.+...|+.. ..|+.... ..||||+|+..|+++.++ .
T Consensus 27 ~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~--g~~~~~~~------g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~ 93 (285)
T 3kea_A 27 ADVHGHSASYYAI-----ADNNVRLVCTLLNA--GALKNLLE------NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD 93 (285)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHT--TGGGSCCT------TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHhC--CCCCCCCC------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 6778888776665 22333333333332 11221111 224555555555555555 3
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
.|+||||+|+..||.++|++|+++|++.
T Consensus 94 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 121 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVKLFVKKNWRL 121 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGG
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 4555555555555555555555555543
No 95
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.82 E-value=4.4e-09 Score=92.24 Aligned_cols=52 Identities=12% Similarity=0.144 Sum_probs=45.9
Q ss_pred cchhHHHHHHHHH---cCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 93 IGLSIVTLLFNAA---AGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 93 ~~~~~~~L~~AA~---~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+....|+||+|+. .|+++.++ ..|+||||+|+..||.++|++|+++||+...
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~ 235 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGT 235 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSC
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 3355689999955 99999998 5899999999999999999999999998764
No 96
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.81 E-value=8.2e-09 Score=77.61 Aligned_cols=86 Identities=15% Similarity=0.131 Sum_probs=64.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhh-hccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYA-ANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~-~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
.|..|++..-.++ ..-+..+...+... ...++.+.. ...|+||+|+..|+.+.++
T Consensus 68 ~~~~g~t~l~~A~-----~~~~~~~~~~Ll~~~~~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 136 (201)
T 3hra_A 68 QNSISDSPYLYAG-----AQGRTEILAYMLKHATPDLNKHNR------YGGNALIPAAEKGHIDNVKLLLEDGREDIDFQ 136 (201)
T ss_dssp CCTTSCCHHHHHH-----HTTCHHHHHHHHHHSCCCTTCCCT------TSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCC
T ss_pred CCCCCCCHHHHHH-----HcCCHHHHHHHHhccCcccccccC------CCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCC
Confidence 6788888877766 44455666666532 223333322 2346999999999999998
Q ss_pred -ccCCcHHHHHHHcCC-----HHHHHHHHhCCCCCCC
Q psy5714 114 -RWGKTPLDEAKTFKR-----DRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 -r~G~TPLh~Aa~~Gh-----~~vV~lLl~~GA~~~~ 144 (163)
..|+||||+|+..++ .++|++|+++|++...
T Consensus 137 ~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp CTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc
Confidence 479999999999987 9999999999998864
No 97
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.80 E-value=2.4e-08 Score=76.83 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=26.9
Q ss_pred HHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
|+||+|+..|+.+.++ ..|+||||+|+..|+.+++++|+++|++..
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 138 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN 138 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 4555555555555555 235666666666666666666666665543
No 98
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.80 E-value=8.5e-09 Score=83.30 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=60.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh--------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------- 113 (163)
.|..|++..-.++ ..-+..+...|+....+++.+.. ...||||+|+..|+.+.++
T Consensus 179 ~~~~g~tpLh~A~-----~~g~~~~v~~Ll~~gad~n~~d~------~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 247 (276)
T 4hbd_A 179 ASQAGQTALMLAV-----SHGRVDVVKALLACEADVNVQDD------DGSTALMCACEHGHKEIAGLLLAVPSCDISLTD 247 (276)
T ss_dssp CTTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC
T ss_pred cCCCCCCHHHHHH-----HcCCHHHHHHHHhCCCCCCCCCC------CCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC
Confidence 4667777777666 33345555555543333333332 3457999999999999998
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLS 140 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA 140 (163)
.+|+||||+|+..||.++|++|+++..
T Consensus 248 ~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 248 RDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 579999999999999999999998753
No 99
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.80 E-value=1.7e-08 Score=78.57 Aligned_cols=86 Identities=16% Similarity=0.123 Sum_probs=60.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------cc
Q psy5714 49 DALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RW 115 (163)
Q Consensus 49 D~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~ 115 (163)
|..|.++.-.++ +.-+..+...|... ..|+... +....|+||+|+..|+.+.++ ..
T Consensus 36 ~~~g~t~L~~A~-----~~g~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (285)
T 1wdy_A 36 EEGGWTPLHNAV-----QMSREDIVELLLRH--GADPVLR----KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY 104 (285)
T ss_dssp TTTCCCHHHHHH-----HTTCHHHHHHHHHT--TCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred CCCCCcHHHHHH-----HcCCHHHHHHHHHc--CCCCccc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcc
Confidence 566777776666 34445555555542 3343322 123447999999999999888 46
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 116 GKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 116 G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
|+||||+|+..|+.+++++|+++|++....
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 899999999999999999999999877643
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.78 E-value=9.6e-09 Score=77.60 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=46.6
Q ss_pred chhHHHHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 94 GLSIVTLLFNAAAGNISALR------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 94 ~~~~~~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
....|+||+|+..|+++.++ ..|+||||+|+..||.++|++|+++|++...
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH 104 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 35678999999999999998 6799999999999999999999999998754
No 101
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.77 E-value=2e-08 Score=73.24 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=58.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------c
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------R 114 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r 114 (163)
.|..|+++.-.++ ..-+..+...|... ..|+... +....||||+|+..|+.+.++ .
T Consensus 63 ~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 63 RTKVDRTPLHMAA-----SEGHANIVEVLLKH--GADVNAK----DMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp CCTTCCCHHHHHH-----HHTCHHHHHHHHTT--TCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCCHHHHHH-----HcChHHHHHHHHHc--CCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 6788898887776 34455556555543 3343322 123447999999999999999 5
Q ss_pred cCCcHHHHHHHcCCHHHHHHHH
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILE 136 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl 136 (163)
+|+||||+|+..|+.+++++|.
T Consensus 132 ~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 132 FCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHhC
Confidence 8999999999999999999983
No 102
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.77 E-value=7.8e-09 Score=86.77 Aligned_cols=50 Identities=22% Similarity=0.216 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHcCChhhhh--------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR--------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk--------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...|+||+||..|+++.++ ..|+||||+|+..||.++|++|+++|++...
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC
Confidence 3457999999999999998 4799999999999999999999999998764
No 103
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.75 E-value=2e-08 Score=79.53 Aligned_cols=52 Identities=23% Similarity=0.166 Sum_probs=47.0
Q ss_pred cchhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 93 IGLSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 93 ~~~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
+....|+||+|+..|+++.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~ 82 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS 82 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 345678999999999999999 5799999999999999999999999998754
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.74 E-value=1e-08 Score=81.47 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=46.5
Q ss_pred chhHHHHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 94 GLSIVTLLFNAAAGNISALR------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 94 ~~~~~~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
....|+||+||..|+++.++ ..|+||||+|+..||.++|++|+++|++...
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 105 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH 105 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc
Confidence 35678999999999999998 5799999999999999999999999998853
No 105
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.74 E-value=1.4e-08 Score=85.28 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=59.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhh-hccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYA-ANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~-~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
.|..|++..-.++ +.-+..+...|+.. ...++.+.. ...||||+|+..|+++.++
T Consensus 275 ~d~~g~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~n~~d~------~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d 343 (373)
T 2fo1_E 275 EKYKGRTALHYAA-----QVSNMPIVKYLVGEKGSNKDKQDE------DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD 343 (373)
T ss_dssp SSCCCCCTHHHHH-----SSCCHHHHHHHHHHSCCCTTCCCT------TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred ccccCCCHHHHHH-----HhCCHHHHHHHHHhcCCCccCcCC------CCCCHHHHHHHcCCHHHHHHHHHcCCCccCCC
Confidence 4667888777666 33344444444432 123333222 3447999999999999999
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
.+|+||||+|+.+||.+||++|++++++.
T Consensus 344 ~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 344 ATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 68999999999999999999999999863
No 106
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.74 E-value=9.8e-09 Score=80.81 Aligned_cols=50 Identities=20% Similarity=0.219 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...|+||+|+..|+++.++ ..|+||||+|+..||.++|++|+++|++...
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 98 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 98 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 3468999999999999999 5799999999999999999999999998754
No 107
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.73 E-value=1.6e-08 Score=83.53 Aligned_cols=30 Identities=20% Similarity=0.055 Sum_probs=26.8
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.|+||||+|+..||.++|++|+++||+...
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 689999999999999999999999998763
No 108
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.73 E-value=2.8e-08 Score=77.92 Aligned_cols=50 Identities=12% Similarity=0.063 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHc---CChhhhh------------------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAA---GNISALR------------------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~---Gdl~~vk------------------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...|+||+|+.. |+.+.++ ..|+||||+|+..|+.++|++|+++|++...
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 455799999999 9999998 1399999999999999999999999998754
No 109
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.72 E-value=1.7e-08 Score=79.17 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=45.3
Q ss_pred hhHHHHHHHH---HcCChhhhh-------c-----------------cCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy5714 95 LSIVTLLFNA---AAGNISALR-------R-----------------WGKTPLDEAKTFKRDRIIQILEGSLSSTSSA 145 (163)
Q Consensus 95 ~~~~~L~~AA---~~Gdl~~vk-------r-----------------~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~~ 145 (163)
...|+||+|+ ..|+.+.++ . .|+||||+|+..||.++|++|+++|++....
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 4558999999 679999998 1 8999999999999999999999999987654
No 110
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.70 E-value=6.6e-08 Score=73.57 Aligned_cols=87 Identities=16% Similarity=0.048 Sum_probs=61.4
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------
Q psy5714 47 PLDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR------------- 113 (163)
Q Consensus 47 ~LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk------------- 113 (163)
.+|+.|.+..-.++ +.-++.++..+... ..|+... +....|+||+|+..|+++.++
T Consensus 4 ~~d~~~~~~l~~A~-----~~g~~~~~~~Ll~~--g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 72 (240)
T 3eu9_A 4 HIDDYSTWDIVKAT-----QYGIYERCRELVEA--GYDVRQP----DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG 72 (240)
T ss_dssp CCSCGGGCCHHHHH-----HTTCHHHHHHHHHT--TCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred ccccccchHHHHHH-----HcCChHHHHHHHHc--CCCcCCC----CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc
Confidence 46777777655555 44455555555543 3333322 123446999999999999998
Q ss_pred -ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 114 -RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 114 -r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
.+|+||||+|+..|+.+++++|+++|++...
T Consensus 73 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 104 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGHLSMVVQLMKYGADPSL 104 (240)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCcCCChhHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 3589999999999999999999999888764
No 111
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.70 E-value=1.8e-08 Score=83.34 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHc---CChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAA---GNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~---Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...|+||+|+.. |+++.++ ..|+||||+|+..|+.++|++|+++||+...
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 254 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGT 254 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSC
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 456799999997 8888888 5799999999999999999999999998754
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.67 E-value=2.9e-08 Score=85.31 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~~~ 144 (163)
...|+||+|+..|+++.++ .+|+||||+|+..||.++|++|+++||+...
T Consensus 234 ~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~ 296 (368)
T 3jue_A 234 DNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296 (368)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCC
Confidence 3447999999999999998 5799999999999999999999999998753
No 113
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.67 E-value=1.6e-08 Score=78.10 Aligned_cols=49 Identities=27% Similarity=0.119 Sum_probs=44.6
Q ss_pred hHHHHHHHHHcCChhhhh-------------ccCCcHHHHHHHcCCHHHHHHHHhC-CCCCCC
Q psy5714 96 SIVTLLFNAAAGNISALR-------------RWGKTPLDEAKTFKRDRIIQILEGS-LSSTSS 144 (163)
Q Consensus 96 ~~~~L~~AA~~Gdl~~vk-------------r~G~TPLh~Aa~~Gh~~vV~lLl~~-GA~~~~ 144 (163)
..|+||+||..|+++.++ ..|+||||+|+..||.++|++|+++ |++...
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~ 135 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ 135 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC
T ss_pred cccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc
Confidence 357999999999999998 5799999999999999999999998 887754
No 114
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.63 E-value=6.5e-08 Score=78.29 Aligned_cols=28 Identities=11% Similarity=-0.037 Sum_probs=13.9
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 115 WGKTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 115 ~G~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
+|+||||+|+..|+.++|++|+++|++.
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 187 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYMTST 187 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCccHHHHHHHcChHHHHHHHHHcCCCC
Confidence 4445555555555555555555544443
No 115
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.57 E-value=7.7e-08 Score=82.64 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=58.9
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-------------ccC
Q psy5714 50 ALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-------------RWG 116 (163)
Q Consensus 50 ~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-------------r~G 116 (163)
..|.+.+-.+. ..-++.+...|+....+++.+.. ...||||+|+..|+.+.++ ..|
T Consensus 233 ~~g~TpLh~Aa-----~~g~~~iv~~LL~~Gadvn~~d~------~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G 301 (368)
T 3jue_A 233 QDNATPLIQAT-----AANSLLACEFLLQNGANVNQADS------AGRGPLHHATILGHTGLACLFLKRGADLGARDSEG 301 (368)
T ss_dssp TTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCCCC------CCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCC
Confidence 56667666555 33345555555543333443322 3447999999999999998 579
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 117 KTPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 117 ~TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
+||||+|+..||.+||++|+++++...
T Consensus 302 ~TpL~~A~~~g~~~iv~lLl~~~~~~~ 328 (368)
T 3jue_A 302 RDPLTIAMETANADIVTLLRLAKMREA 328 (368)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHC---
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 999999999999999999999875543
No 116
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.57 E-value=3.6e-08 Score=76.23 Aligned_cols=50 Identities=12% Similarity=-0.087 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHcCChh----hhh-------------ccCCcHHHHHHHcCC------HHHHHHHHhCCCCCCC
Q psy5714 95 LSIVTLLFNAAAGNIS----ALR-------------RWGKTPLDEAKTFKR------DRIIQILEGSLSSTSS 144 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~----~vk-------------r~G~TPLh~Aa~~Gh------~~vV~lLl~~GA~~~~ 144 (163)
...||||+|+.+|+.+ .++ ..|+||||+|+..|+ .++|++|+++||++..
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~ 109 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA 109 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc
Confidence 3568999999999865 455 689999999999998 5789999999999864
No 117
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.52 E-value=1.3e-07 Score=78.09 Aligned_cols=81 Identities=12% Similarity=-0.005 Sum_probs=57.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCC---hhhhh-----------
Q psy5714 48 LDALGNSCRGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGN---ISALR----------- 113 (163)
Q Consensus 48 LD~~GNSv~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gd---l~~vk----------- 113 (163)
.|..|++++-.++ ..-+..+...|+..+..++.+.. ...||||+|+..|+ .+.++
T Consensus 127 ~d~~g~TpLh~Aa-----~~g~~~~v~~Ll~~Gad~n~~d~------~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 127 VDEHGNTPLHWLT-----SIANLELVKHLVKHGSNRLYGDN------MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp CSTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTBCCT------TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred cCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCC------CCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 5888999888877 44455566556553333333322 34479999999988 33333
Q ss_pred ---ccCCcHHHHHHH----cCCHHHHHHHHhCC
Q psy5714 114 ---RWGKTPLDEAKT----FKRDRIIQILEGSL 139 (163)
Q Consensus 114 ---r~G~TPLh~Aa~----~Gh~~vV~lLl~~G 139 (163)
..|+||||+|+. .|+.++|++|++.+
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 579999999999 99999999999874
No 118
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.40 E-value=3.5e-07 Score=78.65 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHcCChhhhh---ccC------------CcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy5714 95 LSIVTLLFNAAAGNISALR---RWG------------KTPLDEAKTFKRDRIIQILEGSLSST 142 (163)
Q Consensus 95 ~~~~~L~~AA~~Gdl~~vk---r~G------------~TPLh~Aa~~Gh~~vV~lLl~~GA~~ 142 (163)
...||||+||.+|+++.|+ ..| +||||+|+..||.+||++|+++|++.
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~ 189 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 189 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCcc
Confidence 4456888888888888887 223 68888888888888888888888763
No 119
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.39 E-value=1.4e-07 Score=72.91 Aligned_cols=47 Identities=17% Similarity=0.062 Sum_probs=41.9
Q ss_pred HHHHHHHHcCChhhhh------------ccCCcHHHHHHHcCCH----HHHHHHHhCCCCCCC
Q psy5714 98 VTLLFNAAAGNISALR------------RWGKTPLDEAKTFKRD----RIIQILEGSLSSTSS 144 (163)
Q Consensus 98 ~~L~~AA~~Gdl~~vk------------r~G~TPLh~Aa~~Gh~----~vV~lLl~~GA~~~~ 144 (163)
++|+.||..|+++.++ .+|+||||+|+..|+. +||++|+++||++..
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~ 70 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS 70 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC
Confidence 4789999999999988 4699999999999985 599999999998864
No 120
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.33 E-value=2.4e-07 Score=79.72 Aligned_cols=45 Identities=18% Similarity=0.035 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCChhhhh----------------ccCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy5714 97 IVTLLFNAAAGNISALR----------------RWGKTPLDEAKTFKRDRIIQILEGSLSS 141 (163)
Q Consensus 97 ~~~L~~AA~~Gdl~~vk----------------r~G~TPLh~Aa~~Gh~~vV~lLl~~GA~ 141 (163)
.|+||+||..|+++.|+ ..|+||||+|+..||.+||++|+++|++
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad 153 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT 153 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 48999999999999998 1467899999999999999999999974
No 121
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=27.12 E-value=54 Score=21.55 Aligned_cols=33 Identities=9% Similarity=0.221 Sum_probs=26.1
Q ss_pred EEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 41 IALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 41 i~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|..-++=.|-.|+|+..+++...|.++|+..+-
T Consensus 32 i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~ 64 (91)
T 1dny_A 32 IGILDNFFQIGGHSLKAMAVAAQVHREYQVELP 64 (91)
T ss_dssp CCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCC
T ss_pred CCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCC
Confidence 334444467889999999999999999987655
No 122
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=25.82 E-value=81 Score=27.99 Aligned_cols=24 Identities=29% Similarity=0.339 Sum_probs=22.4
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHh
Q psy5714 114 RWGKTPLDEAKTFKRDRIIQILEG 137 (163)
Q Consensus 114 r~G~TPLh~Aa~~Gh~~vV~lLl~ 137 (163)
.-|.|-+|.|+++.|.++..+|+.
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhh
Confidence 359999999999999999999997
No 123
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=22.80 E-value=50 Score=21.65 Aligned_cols=33 Identities=9% Similarity=0.038 Sum_probs=25.9
Q ss_pred EEeecCCCCCCCCcHHHHHHHHHHHHhcCCcch
Q psy5714 41 IALFSPPLDALGNSCRGVQFCEELVKTFNFHKY 73 (163)
Q Consensus 41 i~~~sP~LD~~GNSv~g~~~~~~ls~~l~l~if 73 (163)
|..-.+=.|-.|+|+..+.+...|.++|+..+-
T Consensus 34 i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~ 66 (93)
T 4i4d_A 34 VGPHEDFAALGGNSIHAIXITNRVEELVDAELS 66 (93)
T ss_dssp CCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCC
T ss_pred CCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCC
Confidence 333444467889999999999999999987654
No 124
>3bvp_A INT, TP901-1 integrase; DNA recombinase, recombination; 2.10A {Lactococcus phage tp901-1}
Probab=20.98 E-value=52 Score=23.22 Aligned_cols=88 Identities=9% Similarity=0.043 Sum_probs=53.4
Q ss_pred cCC-CCCCCCcH-HHHHHHHHHHHhcCCcchhhhHhhhccCCCCCCcccccchhHHHHHHHHHcCChhhhh-----ccCC
Q psy5714 45 SPP-LDALGNSC-RGVQFCEELVKTFNFHKYDNLRYAANKIDPRKHKYSSIGLSIVTLLFNAAAGNISALR-----RWGK 117 (163)
Q Consensus 45 sP~-LD~~GNSv-~g~~~~~~ls~~l~l~ifd~L~~~~~kidpr~~~~e~~~~~~~~L~~AA~~Gdl~~vk-----r~G~ 117 (163)
|.. .+.+|+|+ +..+.|+..++..+|.+..... |........+.+....|+-.+..|.++.|= |.+|
T Consensus 12 St~~Q~~~~~sl~~Q~~~l~~~a~~~g~~~~~~~~------D~g~Sg~~~~Rp~l~~ll~~~~~g~~d~lvv~~ldRl~R 85 (138)
T 3bvp_A 12 STTNQAEEGFSIDEQIDRLTKYAEAMGWQVSDTYT------DAGFSGAKLERPAMQRLINDIENKAFDTVLVYKLDRLSR 85 (138)
T ss_dssp SSSCGGGSSSCHHHHHHHHHHHHHHTTCEEEEEEE------EETCCSSSSCCHHHHHHHHGGGGTSCSEEEESSHHHHCS
T ss_pred CchhhcccCCCHHHHHHHHHHHHHHCCCEEEEEEE------eCCCcCCCCCCHHHHHHHHHHHhCCCCEEEEEeCCcccc
Confidence 443 44456676 5667888888888877643221 111011111345666888888889655443 8899
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy5714 118 TPLDEAKTFKRDRIIQILEGSLSSTS 143 (163)
Q Consensus 118 TPLh~Aa~~Gh~~vV~lLl~~GA~~~ 143 (163)
++.+.. ..+++.|.++|..+-
T Consensus 86 ~~~~~~-----~~~~~~l~~~gv~l~ 106 (138)
T 3bvp_A 86 SVRDTL-----YLVKDVFTKNKIDFI 106 (138)
T ss_dssp CHHHHH-----HHHHHTTGGGTCEEE
T ss_pred cHHHHH-----HHHHHHHHHCCCEEE
Confidence 887632 236677888887664
Done!