BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5715
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DFV3|RHG21_MOUSE Rho GTPase-activating protein 21 OS=Mus musculus GN=Arhgap21 PE=1
SV=1
Length = 1944
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++H+LPEHHF+TLK++ HLK V +NSE NKME RNLAI+FGPTLVR +D
Sbjct: 1255 LIHDLPEHHFETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSED 1305
>sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21 OS=Homo sapiens GN=ARHGAP21 PE=1
SV=1
Length = 1957
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++H+LPEHH++TLK++ HLK V +NSE NKME RNLAI+FGPTLVR +D
Sbjct: 1261 LIHDLPEHHYETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSED 1311
>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis GN=arhgap21-a
PE=2 SV=1
Length = 1926
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 43/51 (84%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++ +LP+HH++TLKY+ HLK V DN+E+NKME RNLAI+FGPTLVR +D
Sbjct: 1241 LILDLPDHHYETLKYLSAHLKTVADNAELNKMEPRNLAIVFGPTLVRTSED 1291
>sp|A2RUV4|RHG21_XENTR Rho GTPase-activating protein 21 OS=Xenopus tropicalis GN=arhgap21
PE=2 SV=1
Length = 1935
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++ +LP+HH++TLKY+ HLK V +NSE NKME RNLAI+FGPTLVR +D
Sbjct: 1255 LILDLPDHHYETLKYLSAHLKAVAENSEKNKMEPRNLAIVFGPTLVRTSED 1305
>sp|Q71M21|RH21B_XENLA Rho GTPase-activating protein 21-B OS=Xenopus laevis GN=arhgap21-b
PE=2 SV=1
Length = 1902
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++ +LP+HH++TLKY+ HLK V D+SE NKME RNLAI+FGPTLVR +D
Sbjct: 1218 LILDLPDHHYETLKYLSAHLKTVADSSEKNKMEPRNLAIVFGPTLVRTSED 1268
>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus musculus GN=Arhgap23 PE=1
SV=2
Length = 1483
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++ +LP H+++TLK+++ HLK + D+SE NKME RNLA++FGPTLVR +D
Sbjct: 1016 LIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSED 1066
>sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo sapiens GN=ARHGAP23 PE=1
SV=2
Length = 1491
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
++ +LP H+++TLK+++ HLK + D+SE NKME RNLA++FGPTLVR +D
Sbjct: 1020 LIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSED 1070
>sp|P34288|PAC1_CAEEL GTPase-activating protein pac-1 OS=Caenorhabditis elegans GN=pac-1
PE=1 SV=4
Length = 1605
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 10 KLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRSWT 68
KL ++ +LP H+ TL++++ HL + +S+VNKME RNLA+MFGP++VR DD T
Sbjct: 1065 KLRNLLRKLPRPHYDTLRFLIVHLSEITKHSDVNKMECRNLALMFGPSIVRPSDDNMAT 1123
>sp|Q8CGF1|RHG29_MOUSE Rho GTPase-activating protein 29 OS=Mus musculus GN=Arhgap29 PE=1
SV=1
Length = 1266
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
LK ++ +LP HF +L Y++ HL+RVVD++E NKM ++NL ++FGPTL+R
Sbjct: 803 LKSKDLLRQLPASHFNSLHYLIAHLRRVVDHAEENKMNSKNLGVIFGPTLIR 854
>sp|A7YY57|RHG29_BOVIN Rho GTPase-activating protein 29 OS=Bos taurus GN=ARHGAP29 PE=2
SV=1
Length = 1269
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
LK ++ +LP +F +L Y++ HLKRVVD+SE NKM +RNL ++FGP+L+R
Sbjct: 801 LKSKDLLRQLPASNFNSLHYLIVHLKRVVDHSEENKMNSRNLGVIFGPSLLR 852
>sp|Q5PQJ5|RHG29_RAT Rho GTPase-activating protein 29 OS=Rattus norvegicus GN=Arhgap29
PE=2 SV=2
Length = 1266
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 38/47 (80%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
++ +LP +F +L Y++ HLKRVVD++E NKM ++NL ++FGPTL+R
Sbjct: 803 LLRQLPASNFNSLHYLIVHLKRVVDHAEENKMNSKNLGVIFGPTLIR 849
>sp|Q52LW3|RHG29_HUMAN Rho GTPase-activating protein 29 OS=Homo sapiens GN=ARHGAP29 PE=1
SV=2
Length = 1261
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
LK ++ +LP +F +L +++ HLKRVVD++E NKM ++NL ++FGP+L+R
Sbjct: 801 LKSKDLLRQLPASNFNSLHFLIVHLKRVVDHAEENKMNSKNLGVIFGPSLIR 852
>sp|Q03070|CHIO_RAT Beta-chimaerin OS=Rattus norvegicus GN=Chn2 PE=2 SV=1
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 14 VVHE----LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRSWTC 69
VHE LP H++TL+Y++ HLK+V N + N M A NL I+FGPTL+R +D + T
Sbjct: 214 AVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNLMNAENLGIVFGPTLMRPPEDSTLTT 273
Query: 70 L 70
L
Sbjct: 274 L 274
>sp|Q80XD1|CHIO_MOUSE Beta-chimaerin OS=Mus musculus GN=Chn2 PE=2 SV=2
Length = 332
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 14 VVHE----LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRSWTC 69
VHE LP H++TL+Y++ HLK+V N + N M A NL I+FGPTL+R +D + T
Sbjct: 251 AVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNLMNAENLGIVFGPTLMRPPEDSTLTT 310
Query: 70 L 70
L
Sbjct: 311 L 311
>sp|Q6PCS4|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio rerio GN=arhgap29 PE=2
SV=1
Length = 1337
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 8 QLKLVL-----VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
+LK VL ++ +LP H++TL++++ HL RV + +E NKM A NL I+FGPTL++
Sbjct: 859 ELKRVLFKVRDLLRQLPAPHYKTLQFLITHLHRVSEQAEENKMTASNLGIIFGPTLIK 916
>sp|P52757|CHIO_HUMAN Beta-chimaerin OS=Homo sapiens GN=CHN2 PE=1 SV=2
Length = 468
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 14 VVHE----LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRSWTC 69
VHE LP H++TL+Y++ HLK+V N + N M A NL I+FGPTL+R +D + T
Sbjct: 387 AVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTT 446
Query: 70 L 70
L
Sbjct: 447 L 447
>sp|O74360|RGA4_SCHPO Probable Rho-type GTPase-activating protein 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rga4 PE=1 SV=2
Length = 933
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 7 FQLKL---VLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
FQ KL ++V+ LP H + L+ I++HL RV S N+M ++NLA++F PTL+R D
Sbjct: 847 FQDKLDGFIMVIKSLPPAHAEILQLIIRHLARVAAYSHANRMTSKNLAVVFSPTLIRDPD 906
Query: 64 D 64
+
Sbjct: 907 N 907
>sp|P46941|TG325_CAEEL WW domain-containing protein tag-325 OS=Caenorhabditis elegans
GN=tag-325 PE=4 SV=1
Length = 837
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
++ LP + +TLK +L+HL RV +S N+M+ NLAI+FGPTL GD
Sbjct: 721 LLSRLPNENRETLKMLLRHLNRVASHSSQNRMQQHNLAIVFGPTLFHNGD 770
>sp|Q2M1Z3|RHG31_HUMAN Rho GTPase-activating protein 31 OS=Homo sapiens GN=ARHGAP31 PE=1
SV=2
Length = 1444
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 2 YCVQDFQL-KLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
+C ++ QL ++ V+ ELP H++TL+Y+++HL + S M ARNLA+++ P L+R
Sbjct: 121 HCPEEGQLARIQNVIQELPPSHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNLLR 180
Query: 61 AGDDRSWTC 69
+ + + C
Sbjct: 181 SKEIEATGC 189
>sp|Q6PGG2|GMIP_MOUSE GEM-interacting protein OS=Mus musculus GN=Gmip PE=1 SV=1
Length = 971
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
LK +LV +LP+ ++ TL++++ HL RV E NKM A NL I+FGPTL+R D
Sbjct: 670 LKTLLV--QLPDSNYSTLRHLVAHLFRVAARFEENKMSANNLGIVFGPTLLRPPD 722
>sp|Q6TLK4|RHG27_RAT Rho GTPase-activating protein 27 OS=Rattus norvegicus GN=Arhgap27
PE=1 SV=1
Length = 869
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
Query: 3 CVQDFQLKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
CV+D +V LP + TL+ ++QHL RV+++ E N+M +N+AI+FGPTL+R
Sbjct: 786 CVRD-------LVRTLPAPNHDTLRLLIQHLCRVIEHGEQNRMSVQNVAIVFGPTLLR 836
>sp|Q80YF9|RHG33_MOUSE Rho GTPase-activating protein 33 OS=Mus musculus GN=Arhgap33 PE=1
SV=1
Length = 1305
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRA 61
V+ +LP H++TL+Y+L+HL R+ +S M ARNLAI++ P L+R+
Sbjct: 452 VIQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRS 499
>sp|O14559|RHG33_HUMAN Rho GTPase-activating protein 33 OS=Homo sapiens GN=ARHGAP33 PE=1
SV=2
Length = 1287
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRA 61
V+ +LP H++TL+Y+L+HL R+ +S M ARNLAI++ P L+R+
Sbjct: 428 VIQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRS 475
>sp|Q6PAJ1|BCR_MOUSE Breakpoint cluster region protein OS=Mus musculus GN=Bcr PE=1 SV=3
Length = 1270
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 18 LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRS 66
LPE + T ++L HLKRV + VNKM NLA +FGPTL+R + S
Sbjct: 1170 LPEANLLTFLFLLDHLKRVAEKETVNKMSLHNLATVFGPTLLRPSEKES 1218
>sp|P11274|BCR_HUMAN Breakpoint cluster region protein OS=Homo sapiens GN=BCR PE=1 SV=2
Length = 1271
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 18 LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRS 66
LPE + T ++L HLKRV + VNKM NLA +FGPTL+R + S
Sbjct: 1171 LPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTLLRPSEKES 1219
>sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus musculus GN=Arhgap27 PE=1
SV=1
Length = 869
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
Query: 3 CVQDFQLKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
CV+D +V LP + TL+ ++QHL RV+++ E N+M +N+AI+FGPTL+R
Sbjct: 786 CVRD-------LVRTLPAPNQDTLRLLIQHLCRVIEHGEQNRMTVQNVAIVFGPTLLR 836
>sp|O94466|RGA7_SCHPO Probable Rho-GTPase-activating protein 7 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rga7 PE=1 SV=1
Length = 695
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 37/46 (80%)
Query: 15 VHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
+++LP+ ++ T++++ HL ++ +NS+VNKM NLAI++GPT+++
Sbjct: 622 INDLPDANYSTIRHLTIHLAKIKENSDVNKMSTNNLAIIWGPTIIK 667
>sp|Q5ZMW5|RHG26_CHICK Rho GTPase-activating protein 26 OS=Gallus gallus GN=ARHGAP26 PE=1
SV=2
Length = 760
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD 64
+VH LPE + Q L ++ HL +V DN + N M NL ++FGPTL+R ++
Sbjct: 492 LVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEE 542
>sp|Q3TBD2|HMHA1_MOUSE Minor histocompatibility protein HA-1 OS=Mus musculus GN=Hmha1 PE=1
SV=2
Length = 1116
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 10 KLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
+L ++ +LP + TL Y+L+HL+R+V+ + NKM NL I+FGPTL+R
Sbjct: 887 RLRELMQDLPAENRATLLYLLKHLRRIVEMEQDNKMTPGNLGIVFGPTLLR 937
>sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1
SV=2
Length = 750
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRS 66
++ +P+ + TL+Y+L+HL RV+ +S+ N+M NL I+FGPTL R + S
Sbjct: 673 LIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETS 725
>sp|A4II46|ABR_XENTR Active breakpoint cluster region-related protein OS=Xenopus
tropicalis GN=abr PE=2 SV=1
Length = 862
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
++ LP+ + T ++LQHLKRV + +NKM NLA +FGPTL+R +
Sbjct: 763 LLRSLPDPNLMTFLFLLQHLKRVAEKEPINKMSLHNLATVFGPTLLRPSE 812
>sp|P30337|CHIN_RAT N-chimaerin OS=Rattus norvegicus GN=Chn1 PE=2 SV=2
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
+ LP H +TL+Y++ HLKRV + + N M A NL I+FGPTL+R+ +
Sbjct: 257 ALRSLPPAHCETLRYLMAHLKRVTLHEKENLMSAENLGIVFGPTLMRSPE 306
>sp|Q6ZUM4|RHG27_HUMAN Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1
SV=3
Length = 889
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 3 CVQDFQLKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
CV+D +V LP + TL+ + QHL RV+++ E N+M +++AI+FGPTL+R
Sbjct: 806 CVRD-------LVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLR 856
>sp|Q9P107|GMIP_HUMAN GEM-interacting protein OS=Homo sapiens GN=GMIP PE=1 SV=2
Length = 970
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
LK +LV +LP+ ++ TL++++ HL RV NKM A NL I+FGPTL+R D
Sbjct: 671 LKTLLV--QLPDSNYNTLRHLVAHLFRVAARFMENKMSANNLGIVFGPTLLRPPD 723
>sp|Q91V57|CHIN_MOUSE N-chimaerin OS=Mus musculus GN=Chn1 PE=1 SV=2
Length = 459
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 DFQLK-LVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
D QL+ L + LP H +TL+Y++ HLKRV + + N M A NL I+FGPTL+R+ +
Sbjct: 373 DEQLETLHEALRSLPPAHCETLRYLMAHLKRVTLHEKENLMSAENLGIVFGPTLMRSPE 431
>sp|Q9BE31|RHG12_MACFA Rho GTPase-activating protein 12 OS=Macaca fascicularis GN=ARHGAP12
PE=2 SV=1
Length = 847
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
++ +LP+ + T++ + +HLKRVV+N E N+M +++AI+FGPTL++
Sbjct: 769 LIRQLPKPNQDTMQILFRHLKRVVENGEKNRMTYQSIAIVFGPTLLK 815
>sp|Q5RB40|HMHA1_PONAB Minor histocompatibility protein HA-1 OS=Pongo abelii GN=HMHA1 PE=2
SV=1
Length = 1163
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 10 KLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
+L ++ +LP + +L+Y+L+HL+R+V+ + NKM NL I+FGPTL+R
Sbjct: 917 RLRELLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLR 967
>sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1
SV=2
Length = 1136
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 10 KLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
+L ++ +LP + +L+Y+L+HL+R+V+ + NKM NL I+FGPTL+R
Sbjct: 890 RLRELLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLR 940
>sp|Q17QN0|CHIN_BOVIN N-chimaerin OS=Bos taurus GN=CHN1 PE=2 SV=1
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 18 LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
LP H +TL+Y++ HLKRV + + N M A NL I+FGPTL+R+ +
Sbjct: 261 LPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPE 306
>sp|P15882|CHIN_HUMAN N-chimaerin OS=Homo sapiens GN=CHN1 PE=1 SV=3
Length = 459
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 18 LPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
LP H +TL+Y++ HLKRV + + N M A NL I+FGPTL+R+ +
Sbjct: 386 LPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPE 431
>sp|Q8C0D4|RHG12_MOUSE Rho GTPase-activating protein 12 OS=Mus musculus GN=Arhgap12 PE=1
SV=2
Length = 838
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
++ +LP+ + T++ + +HLKRV++N E N+M +++AI+FGPTL++
Sbjct: 760 LIRQLPKPNQDTMQILFRHLKRVIENGEKNRMTYQSIAIVFGPTLLK 806
>sp|Q9VTU3|RG68F_DROME Rho GTPase-activating protein 68F OS=Drosophila melanogaster
GN=RhoGAP68F PE=1 SV=1
Length = 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 13 LVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLV 59
L+ +LPE +++ KYI++ L RV+D ++NKM + NLAI+FGP +
Sbjct: 388 LIREKLPEENYELFKYIVEFLVRVMDCEDLNKMTSSNLAIVFGPNFL 434
>sp|Q6DE55|HMHA1_XENLA Minor histocompatibility protein HA-1 OS=Xenopus laevis GN=hmha1
PE=2 SV=1
Length = 1107
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 8 QLKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
QLK +L +LP + TL+Y+++HL RV + ++NKM NL I+FGP L+R
Sbjct: 858 QLKELL--QDLPSENRTTLQYLVKHLCRVSEQEQLNKMSPSNLGIVFGPALMR 908
>sp|A6X8Z5|RHG31_MOUSE Rho GTPase-activating protein 31 OS=Mus musculus GN=Arhgap31 PE=1
SV=1
Length = 1425
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDRSWTC 69
V+ ELP H++TL+Y+++HL + S M ARNLA+++ P L+R+ + C
Sbjct: 134 VILELPPPHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNLLRSKKIEATIC 189
>sp|Q811P8|RHG32_MOUSE Rho GTPase-activating protein 32 OS=Mus musculus GN=Arhgap32 PE=1
SV=2
Length = 2089
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRA 61
+K+ V+ +LP H++TL+++++HL + D + M A+NLAI++ P L+R+
Sbjct: 480 IKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRS 532
>sp|A7KAX9|RHG32_HUMAN Rho GTPase-activating protein 32 OS=Homo sapiens GN=ARHGAP32 PE=1
SV=1
Length = 2087
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRA 61
+K+ V+ +LP H++TL+++++HL + D + M A+NLAI++ P L+R+
Sbjct: 480 IKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRS 532
>sp|Q8IWW6|RHG12_HUMAN Rho GTPase-activating protein 12 OS=Homo sapiens GN=ARHGAP12 PE=1
SV=1
Length = 846
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 37/47 (78%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVR 60
++ +LP+ + T++ + +HL+RV++N E N+M +++AI+FGPTL++
Sbjct: 768 LIRQLPKPNQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTLLK 814
>sp|A6QNS3|ABR_BOVIN Active breakpoint cluster region-related protein OS=Bos taurus
GN=ABR PE=2 SV=1
Length = 859
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 14 VVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
++ LP+ + T ++L+HLKRV + VNKM NLA +FGPTL+R +
Sbjct: 760 LLRSLPDPNLITFLFLLEHLKRVAEKEPVNKMSLHNLATVFGPTLLRPSE 809
>sp|A6NI28|RHG42_HUMAN Rho GTPase-activating protein 42 OS=Homo sapiens GN=ARHGAP42 PE=1
SV=3
Length = 874
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 5 QDFQLKLV-LVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
Q+++++ V +VH+LPE + + L +++HL +V +S+ N M NL ++FGPTL+RA +
Sbjct: 486 QNYRVEAVHALVHKLPEKNREMLDILIKHLVKVSLHSQQNLMTVSNLGVIFGPTLMRAQE 545
Query: 64 D 64
+
Sbjct: 546 E 546
>sp|Q640N3|RHG30_MOUSE Rho GTPase-activating protein 30 OS=Mus musculus GN=Arhgap30 PE=2
SV=3
Length = 1101
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 9 LKLVLVVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGD 63
+K++ V+ ELP +++TL+++++HL + S M ARNLAI++ P L+R+ D
Sbjct: 128 VKILEVLQELPIQNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNLLRSKD 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.142 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,119,782
Number of Sequences: 539616
Number of extensions: 1314063
Number of successful extensions: 4068
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3854
Number of HSP's gapped (non-prelim): 229
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)