Query psy5716
Match_columns 294
No_of_seqs 323 out of 1554
Neff 8.1
Searched_HMMs 29240
Date Sat Aug 17 00:48:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5716.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5716hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fk2_A Glucocorticoid receptor 100.0 2.7E-38 9.1E-43 279.2 13.7 156 132-290 48-220 (246)
2 2ee4_A RHO GTPase activating p 100.0 2.2E-38 7.4E-43 273.4 11.8 155 133-290 8-179 (209)
3 2osa_A N-chimaerin; RHO-GAP, G 100.0 1.5E-38 5E-43 273.0 10.5 154 135-289 6-177 (202)
4 3msx_B RHO GTPase-activating p 100.0 5.3E-38 1.8E-42 269.4 13.0 151 132-288 7-174 (201)
5 3byi_A RHO GTPase activating p 100.0 7.1E-38 2.4E-42 271.1 12.3 154 133-288 15-186 (214)
6 1tx4_A P50-rhogap; complex (GT 100.0 4.2E-37 1.4E-41 263.2 11.9 152 132-288 3-174 (198)
7 3iug_A RHO/CDC42/RAC GTPase-ac 100.0 7E-37 2.4E-41 267.4 12.8 155 132-287 16-187 (229)
8 1f7c_A Rhogap protein; GTPase 100.0 8.6E-37 2.9E-41 267.1 12.6 148 144-291 43-194 (231)
9 3kuq_A RHO GTPase-activating p 100.0 5.7E-37 2E-41 267.8 11.1 153 131-287 14-184 (228)
10 1ow3_A RHO-GTPase-activating p 100.0 4.6E-36 1.6E-40 264.2 11.9 153 131-288 38-210 (242)
11 1pbw_A Rhogap domain, phosphat 100.0 2E-36 6.7E-41 262.3 8.2 130 155-289 45-177 (216)
12 2ovj_A Mgcracgap, RAC GTPase-a 100.0 1.4E-35 4.7E-40 254.3 12.3 151 134-288 13-166 (201)
13 3eap_A RHO GTPase-activating p 100.0 1.6E-34 5.4E-39 258.3 12.4 149 132-287 59-227 (271)
14 3cxl_A N-chimerin; SH2, RHO-GA 100.0 4E-34 1.4E-38 273.9 11.9 156 134-290 266-439 (463)
15 2xs6_A Phosphatidylinositol 3- 100.0 3.7E-34 1.3E-38 247.1 1.8 140 133-288 18-177 (214)
16 3qis_A Inositol polyphosphate 100.0 2.3E-31 7.8E-36 247.3 10.5 142 136-289 197-341 (366)
17 3pp2_A RHO GTPase-activating p 99.4 9.4E-14 3.2E-18 109.3 6.4 57 4-61 66-123 (124)
18 1dro_A Beta-spectrin; cytoskel 99.3 1.8E-12 6.3E-17 101.3 7.4 56 5-61 64-119 (122)
19 2p0d_A RHO GTPase-activating p 99.3 3.1E-12 1.1E-16 101.2 7.6 57 5-62 69-125 (129)
20 1wjm_A Beta-spectrin III; PH d 99.2 3.1E-11 1.1E-15 94.2 8.5 58 4-62 61-118 (123)
21 3a8n_A TIAM-1, T-lymphoma inva 99.2 2.3E-11 8E-16 107.9 6.4 59 4-63 68-126 (279)
22 3cxb_B Pleckstrin homology dom 99.1 1.5E-10 5.1E-15 89.1 7.0 56 5-61 44-101 (112)
23 2dtc_A RAL guanine nucleotide 99.1 2.3E-10 7.9E-15 89.7 7.3 56 5-61 57-112 (126)
24 1btn_A Beta-spectrin; signal t 99.0 5E-10 1.7E-14 84.5 7.2 54 4-58 52-105 (106)
25 3a8p_A T-lymphoma invasion and 98.7 2.6E-08 8.8E-13 88.0 7.3 57 6-63 70-126 (263)
26 2j59_M RHO-GTPase activating p 98.5 2.2E-07 7.4E-12 76.2 6.9 53 7-61 59-111 (168)
27 1pls_A Pleckstrin homology dom 98.4 1.5E-06 5.1E-11 66.0 8.6 58 6-64 46-104 (113)
28 2cof_A Protein KIAA1914; PH do 98.4 6.7E-07 2.3E-11 67.6 6.5 52 7-60 49-100 (107)
29 1wgq_A FYVE, rhogef and PH dom 98.4 8.7E-07 3E-11 67.0 7.0 55 5-60 48-102 (109)
30 1wi1_A Calcium-dependent activ 98.3 1.7E-06 5.7E-11 67.5 8.4 54 6-61 54-110 (126)
31 2coc_A FYVE, rhogef and PH dom 98.3 8.8E-07 3E-11 67.9 6.6 55 5-61 50-106 (112)
32 2w2x_D 1-phosphatidylinositol- 98.3 7.1E-07 2.4E-11 69.6 5.7 56 6-61 62-119 (124)
33 1u5d_A SKAP55, SRC kinase-asso 98.3 1.5E-06 5.3E-11 65.0 6.6 57 5-62 47-106 (108)
34 2fjl_A 1-phosphatidylinositol- 98.2 2.7E-06 9.2E-11 68.1 7.1 57 5-61 90-148 (150)
35 2d9y_A Pleckstrin homology dom 98.2 3.7E-06 1.3E-10 64.0 7.1 55 6-61 53-109 (117)
36 2d9x_A Oxysterol binding prote 98.1 3.1E-06 1.1E-10 65.2 5.8 54 6-63 53-106 (120)
37 1wg7_A Dedicator of cytokinesi 98.1 5.5E-06 1.9E-10 66.2 7.1 54 6-61 71-124 (150)
38 2i5f_A Pleckstrin; PH domain, 98.1 8E-06 2.7E-10 61.3 6.8 54 6-60 50-108 (109)
39 2dkp_A Pleckstrin homology dom 98.1 8.2E-06 2.8E-10 63.2 6.9 54 7-61 64-119 (128)
40 2yry_A Pleckstrin homology dom 98.0 8.5E-06 2.9E-10 62.5 6.7 54 6-60 64-119 (122)
41 2d9v_A Pleckstrin homology dom 98.0 1.4E-05 4.8E-10 62.5 7.6 41 20-61 74-114 (130)
42 2rlo_A Centaurin-gamma 1; spli 98.0 1.2E-05 4E-10 62.7 7.1 38 23-61 87-124 (128)
43 1x05_A Pleckstrin; PH domain, 98.0 1.3E-05 4.3E-10 62.3 7.1 55 6-61 61-120 (129)
44 2dn6_A KIAA0640 protein; PH do 98.0 1.6E-05 5.6E-10 60.2 7.6 55 7-63 50-105 (115)
45 4a6h_A Phosphatidylinositol 4, 98.0 1.1E-05 3.8E-10 62.5 6.2 55 6-60 50-117 (120)
46 1upq_A PEPP1; PH domain, phosp 98.0 1.4E-05 4.7E-10 61.4 6.7 55 6-61 53-109 (123)
47 1u5f_A SRC-associated adaptor 98.0 1.1E-05 3.7E-10 64.4 6.3 56 6-62 62-120 (148)
48 3aj4_A Pleckstrin homology dom 98.0 9.7E-06 3.3E-10 61.3 5.4 41 19-60 70-110 (112)
49 1v89_A Hypothetical protein KI 97.9 2.1E-05 7.1E-10 59.7 7.1 56 6-61 49-112 (118)
50 1fao_A Dual adaptor of phospho 97.9 2E-05 6.8E-10 60.9 6.8 55 6-62 59-113 (126)
51 1x1g_A Pleckstrin 2; PH domain 97.9 1.1E-05 3.8E-10 62.5 5.3 54 6-60 62-123 (129)
52 3rcp_A Pleckstrin homology dom 97.9 2E-05 6.7E-10 58.7 6.1 53 5-61 41-93 (103)
53 2q13_A DCC-interacting protein 97.9 1.1E-05 3.8E-10 74.8 5.7 54 6-61 321-375 (385)
54 1v88_A Oxysterol binding prote 97.9 2.4E-05 8.1E-10 61.5 6.8 54 6-61 48-124 (130)
55 1fgy_A GRP1; PH domain, signal 97.9 2.9E-05 9.9E-10 59.8 7.2 54 7-62 47-121 (127)
56 2dhk_A TBC1 domain family memb 97.8 4.1E-05 1.4E-09 58.7 6.3 54 6-63 53-106 (119)
57 1x1f_A Signal-transducing adap 97.8 5.7E-05 2E-09 60.7 7.1 54 6-61 59-113 (149)
58 1eaz_A Tandem PH domain contai 97.7 3.7E-05 1.3E-09 59.1 5.3 54 7-62 56-112 (125)
59 1u5e_A SRC-associated adaptor 97.7 6.4E-05 2.2E-09 64.0 6.9 56 5-61 150-208 (211)
60 2y7b_A Actin-binding protein a 97.7 7.8E-05 2.7E-09 58.0 6.9 57 6-62 51-129 (134)
61 2da0_A 130-kDa phosphatidylino 97.7 8.7E-05 3E-09 56.4 6.9 52 6-62 51-102 (114)
62 1v5u_A SBF1, SET binding facto 97.7 4.8E-05 1.6E-09 57.7 5.3 54 6-61 51-111 (117)
63 2rsg_A Collagen type IV alpha- 97.7 5.6E-05 1.9E-09 55.2 5.4 49 6-59 44-92 (94)
64 1v5p_A Pleckstrin homology dom 97.7 0.0001 3.5E-09 57.5 7.0 53 6-60 64-119 (126)
65 4h8s_A DCC-interacting protein 97.6 7.8E-05 2.7E-09 69.6 7.3 55 5-61 343-398 (407)
66 1unq_A RAC-alpha serine/threon 97.6 6.5E-05 2.2E-09 57.9 5.0 55 8-62 52-111 (125)
67 2cod_A Centaurin-delta 1; ARF 97.5 0.00028 9.6E-09 53.4 7.5 52 6-64 50-102 (115)
68 1dyn_A Dynamin; signal transdu 97.3 0.00044 1.5E-08 53.4 5.7 52 8-60 57-116 (125)
69 1qqg_A IRS-1, insulin receptor 97.2 0.00038 1.3E-08 61.2 6.0 55 5-62 58-113 (264)
70 2r09_A Cytohesin-3; autoinhibi 97.2 0.00044 1.5E-08 63.2 6.5 54 7-61 255-328 (347)
71 3tfm_A Myosin X; split PH doma 97.2 0.00047 1.6E-08 59.2 6.0 51 7-61 105-155 (228)
72 2ys3_A UNC-112-related protein 97.2 0.00067 2.3E-08 53.2 6.3 54 7-60 56-111 (137)
73 2lul_A Tyrosine-protein kinase 97.2 0.00066 2.3E-08 55.2 6.5 53 7-61 63-121 (164)
74 1btk_A Bruton'S tyrosine kinas 97.1 0.00071 2.4E-08 55.3 5.9 34 26-61 99-132 (169)
75 1v5m_A SH2 and PH domain-conta 96.8 0.0013 4.3E-08 51.1 4.7 41 20-61 90-130 (136)
76 1zc3_B Exocyst complex protein 96.4 0.011 3.8E-07 44.9 7.3 52 8-61 56-107 (113)
77 2rov_A RHO-associated protein 96.3 0.0078 2.7E-07 46.0 6.3 39 22-60 72-114 (117)
78 3lju_X ARF-GAP with dual PH do 96.3 0.0051 1.7E-07 56.9 5.8 37 24-62 337-373 (386)
79 1v61_A RAC/CDC42 guanine nucle 96.2 0.0083 2.8E-07 46.9 6.1 55 7-62 73-127 (132)
80 3tca_A Amyloid beta A4 precurs 95.8 0.0097 3.3E-07 52.2 5.1 52 8-60 214-275 (291)
81 2d9w_A Docking protein 2; PH d 95.3 0.03 1E-06 43.1 5.6 52 6-60 65-120 (127)
82 3lju_X ARF-GAP with dual PH do 94.9 0.017 5.7E-07 53.4 3.7 55 6-60 189-245 (386)
83 3qwm_A Iqsec1, IQ motif and SE 94.9 0.091 3.1E-06 41.3 7.4 54 7-62 65-123 (140)
84 4bbk_A Kindlin-1, fermitin fam 94.1 0.091 3.1E-06 41.9 5.8 54 7-60 73-128 (165)
85 1dbh_A Protein (human SOS 1); 93.9 0.11 3.7E-06 47.0 6.8 55 6-61 295-349 (354)
86 2adz_A Alpha-1-syntrophin; pro 93.6 0.12 4E-06 42.3 5.8 53 8-60 123-176 (178)
87 4f7h_A Fermitin family homolog 92.9 0.18 6E-06 40.7 5.7 54 7-60 94-149 (173)
88 1z87_A Alpha-1-syntrophin; pro 92.3 0.22 7.6E-06 43.4 6.1 52 8-60 208-261 (263)
89 2z0q_A XPLN, RHO guanine nucle 92.1 0.31 1E-05 43.8 7.0 55 6-60 274-345 (346)
90 2dfk_A Collybistin II; DH doma 91.7 0.3 1E-05 45.0 6.6 56 7-62 303-364 (402)
91 3mpx_A FYVE, rhogef and PH dom 90.9 0.27 9.1E-06 45.6 5.5 52 7-61 286-337 (434)
92 2pz1_A RHO guanine nucleotide 90.7 0.49 1.7E-05 44.3 7.1 56 7-62 380-441 (466)
93 3hk0_A Growth factor receptor- 88.7 0.45 1.5E-05 41.3 4.7 53 8-60 178-239 (256)
94 3ksy_A SOS-1, SON of sevenless 88.2 0.67 2.3E-05 48.2 6.4 55 6-61 492-546 (1049)
95 4gmv_A RAS-associated and plec 87.6 0.55 1.9E-05 41.2 4.6 53 8-60 204-265 (281)
96 2vrw_B P95VAV, VAV1, proto-onc 87.6 0.89 3E-05 41.7 6.3 56 7-62 277-336 (406)
97 1kz7_A Guanine nucleotide exch 87.0 1.2 4.2E-05 40.0 6.8 39 24-62 288-326 (353)
98 3jzy_A Intersectin 2; C2 domai 86.3 0.14 4.7E-06 48.5 0.0 55 6-62 309-363 (510)
99 4ejn_A RAC-alpha serine/threon 86.1 0.8 2.7E-05 42.3 5.2 42 19-61 64-108 (446)
100 2lg1_A A-kinase anchor protein 85.8 1.6 5.4E-05 35.7 6.2 55 6-63 118-174 (185)
101 1nty_A Triple functional domai 85.7 1.4 4.7E-05 38.8 6.3 38 24-61 268-308 (311)
102 1xcg_A PDZ-rhogef, RHO guanine 84.2 2 6.7E-05 38.7 6.7 53 6-61 311-366 (368)
103 2rgn_B RHOA/RAC/CDC42 exchange 83.6 1.2 4.3E-05 40.0 5.1 39 24-62 278-319 (354)
104 1w1g_A HPDK1, 3-phosphoinositi 82.7 1.8 6.1E-05 34.3 5.0 36 23-61 104-139 (151)
105 3t06_A PDZ-rhogef, RHO guanine 82.4 2.4 8.4E-05 38.8 6.7 55 6-63 353-410 (418)
106 1foe_A T-lymphoma invasion and 81.9 2.8 9.7E-05 37.8 6.9 56 7-62 305-367 (377)
107 1txd_A RHO guanine nucleotide 80.8 1.9 6.5E-05 39.1 5.2 55 6-63 315-371 (385)
108 3ky9_A Proto-oncogene VAV; cal 80.4 2.1 7.3E-05 41.3 5.7 56 7-62 449-508 (587)
109 3p6a_A RHO guanine nucleotide 79.4 2.1 7.3E-05 38.6 5.1 54 7-63 318-373 (377)
110 3odw_A RHO guanine nucleotide 78.3 2.6 9E-05 40.2 5.6 54 6-63 470-526 (536)
111 3tfm_A Myosin X; split PH doma 72.2 1.6 5.5E-05 36.8 2.0 23 37-59 205-227 (228)
112 2d9z_A Protein kinase C, NU ty 69.7 9.9 0.00034 29.1 5.7 36 24-61 73-123 (129)
113 3v5w_A G-protein coupled recep 59.3 13 0.00044 36.7 5.9 41 19-60 611-651 (689)
114 2coa_A Protein kinase C, D2 ty 49.6 11 0.00039 28.6 2.9 35 24-60 73-118 (125)
115 3ml4_A Protein DOK-7; tyrosine 39.8 38 0.0013 28.3 4.9 52 7-60 60-112 (224)
116 3llb_A Uncharacterized protein 39.3 16 0.00054 25.3 2.1 47 152-208 6-52 (83)
117 2rk5_A Putative hemolysin; str 39.2 18 0.00061 25.2 2.4 44 154-207 7-50 (87)
118 2r2z_A Hemolysin; APC85144, en 39.1 18 0.00062 25.5 2.5 46 153-208 14-59 (93)
119 2p3h_A Uncharacterized CBS dom 38.9 18 0.00061 26.3 2.4 46 153-208 10-55 (101)
120 2pli_A Uncharacterized protein 38.0 18 0.00061 25.5 2.3 46 153-208 16-61 (91)
121 3lae_A UPF0053 protein HI0107; 33.6 16 0.00056 25.1 1.4 47 152-208 6-52 (81)
122 3iwf_A Transcription regulator 33.5 33 0.0011 25.0 3.2 39 231-275 5-43 (107)
123 2o3f_A Putative HTH-type trans 33.1 41 0.0014 24.6 3.7 37 232-274 10-46 (111)
124 1rp3_B Anti sigma factor FLGM; 28.4 86 0.003 21.9 4.6 33 162-203 56-88 (88)
125 1fho_A UNC-89; pleckstrin homo 27.0 19 0.00065 27.0 0.9 33 27-59 75-110 (119)
126 2pls_A CBS domain protein; APC 25.8 47 0.0016 22.9 2.8 50 153-208 7-56 (86)
127 2oai_A Hemolysin; PFAM03471, x 23.9 36 0.0012 24.1 1.8 50 152-208 15-64 (94)
128 2p4p_A Hypothetical protein HD 21.2 64 0.0022 22.2 2.7 48 153-208 7-54 (86)
129 2o3g_A Putative protein; APC85 21.1 22 0.00077 25.0 0.2 47 153-208 15-62 (92)
130 1mai_A Phospholipase C delta-1 20.6 1.5E+02 0.0053 21.9 5.0 37 24-61 84-121 (131)
No 1
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=279.18 Aligned_cols=156 Identities=31% Similarity=0.530 Sum_probs=141.3
Q ss_pred CCCCCccccccccccccccccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHH
Q psy5716 132 YPPGSNIGVPLQHCVSVNLLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVI 194 (294)
Q Consensus 132 ~~~~~~fgv~L~~~~~~~~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~v 194 (294)
...+.+||++|+.++.....+|. ||||++|+...+++|++.||+|.+.++...+ +|||+|
T Consensus 48 ~~~~~vFGv~L~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~---~dvh~v 124 (246)
T 3fk2_A 48 TWESNYFGVPLTTVVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKD---FTVNTV 124 (246)
T ss_dssp -CCCSSTTSCGGGGCCSSSCSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGT---CCHHHH
T ss_pred ccCCCeeCCCHHHHhcCCCCCChHHHHHHHHHHHhCCCCCCeeEeCCcHHHHHHHHHHHhcCCCCCccccc---CcHHHH
Confidence 34578999999987766556766 9999999999999999999998765443322 699999
Q ss_pred HHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchh
Q psy5716 195 SSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLA 274 (294)
Q Consensus 195 a~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLA 274 (294)
|++||.|||+||+||||+++|+.|+.+.+..+.++++..++.++.+||+.|+.+|+||+.||++|+++++.|+|++.|||
T Consensus 125 a~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~NLA 204 (246)
T 3fk2_A 125 AGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLS 204 (246)
T ss_dssp HHHHHHHHHHSSSCSSCHHHHHHHHHHTTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCccCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCchHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccCCCCcc
Q psy5716 275 IMFGPTLVRAGDDNMV 290 (294)
Q Consensus 275 ivf~P~L~~~~~~~~~ 290 (294)
+||||+|+|+..+++.
T Consensus 205 ivf~P~Llrp~~~~~~ 220 (246)
T 3fk2_A 205 ICFWPTLMRPDFSTMD 220 (246)
T ss_dssp HHHHHHHHCCCSSSSC
T ss_pred HHhcccccCCCCccHH
Confidence 9999999999776664
No 2
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=100.00 E-value=2.2e-38 Score=273.36 Aligned_cols=155 Identities=30% Similarity=0.521 Sum_probs=138.8
Q ss_pred CCCCccccccccccccccccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHH
Q psy5716 133 PPGSNIGVPLQHCVSVNLLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVIS 195 (294)
Q Consensus 133 ~~~~~fgv~L~~~~~~~~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va 195 (294)
..+.+||++|+.++.....+|. ||||++|+..++++|++.||+|.+.++... ..|+|+||
T Consensus 8 ~~~~~FG~~L~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~---~~d~~~va 84 (209)
T 2ee4_A 8 WESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSM---EVTVNAVA 84 (209)
T ss_dssp SCCSSSSSCHHHHSCSSCCSCHHHHHHHHHHHHTCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHH---TCCHHHHH
T ss_pred CCCCeeCCcHHHHHhcCCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccC---CCCHHHHH
Confidence 4567999999876665555665 999999999999999999999876433211 26999999
Q ss_pred HHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhH
Q psy5716 196 SLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAI 275 (294)
Q Consensus 196 ~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAi 275 (294)
++||+|||+||+||+|+++|+.|+++.+..+.++++..++.++.+||+.|+.+|+||+.||++|+++++.|+|++.|||+
T Consensus 85 ~lLK~flreLPePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLai 164 (209)
T 2ee4_A 85 GALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSI 164 (209)
T ss_dssp HHHHHHHHHSSSCSSCTTTHHHHHHHHSCSSHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHH
T ss_pred HHHHHHHHhCCCccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccCCCCcc
Q psy5716 276 MFGPTLVRAGDDNMV 290 (294)
Q Consensus 276 vf~P~L~~~~~~~~~ 290 (294)
||||+|+|++.++..
T Consensus 165 vf~P~L~~~~~~~~~ 179 (209)
T 2ee4_A 165 CFWPTLMRPDFENRE 179 (209)
T ss_dssp HHHHHHSCCCCCSSC
T ss_pred HhcccccCCCCccHH
Confidence 999999999776653
No 3
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=273.05 Aligned_cols=154 Identities=32% Similarity=0.528 Sum_probs=135.1
Q ss_pred CCccccccccccccc-cccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHH
Q psy5716 135 GSNIGVPLQHCVSVN-LLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISS 196 (294)
Q Consensus 135 ~~~fgv~L~~~~~~~-~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~ 196 (294)
+++||++|+.++... ..+|. ||||++|+..++++|++.||++.+. +++....+.|+|++|+
T Consensus 6 ~~vFG~~L~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~-~d~~~~~~~d~~~va~ 84 (202)
T 2osa_A 6 KKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEK-ADISVNMYEDINIITG 84 (202)
T ss_dssp -CCTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHHGGG-CCCSTTTCCCHHHHHH
T ss_pred CCccCCChHHHHHHcCCCCCcHHHHHHHHHHHhCCCcCCeeeecCcHHHHHHHHHHHHcCCCc-cCCCccccccHHHHHH
Confidence 568888887655432 34454 9999999999999999999985322 3333334579999999
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhHh
Q psy5716 197 LLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIM 276 (294)
Q Consensus 197 lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAiv 276 (294)
+||.|||+||+||+|.++|+.|+++.+..+.+++++.++.++.+||+.|+.+|+||+.||++|+++++.|+|++.|||+|
T Consensus 85 lLK~flreLpePLl~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~NLa~v 164 (202)
T 2osa_A 85 ALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIV 164 (202)
T ss_dssp HHHHHHHTCSSCSSCTTTHHHHHHHHHCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHH
T ss_pred HHHHHHHhCCCccCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCc
Q psy5716 277 FGPTLVRAGDDNM 289 (294)
Q Consensus 277 f~P~L~~~~~~~~ 289 (294)
|||+|+++++++.
T Consensus 165 f~P~Ll~~~~~~~ 177 (202)
T 2osa_A 165 FGPTLMRSPELDA 177 (202)
T ss_dssp HHHHHCCCCCCCH
T ss_pred HccccCCCCCccH
Confidence 9999999987654
No 4
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=269.35 Aligned_cols=151 Identities=25% Similarity=0.483 Sum_probs=135.9
Q ss_pred CCCCCccccccccccccccccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHH
Q psy5716 132 YPPGSNIGVPLQHCVSVNLLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVI 194 (294)
Q Consensus 132 ~~~~~~fgv~L~~~~~~~~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~v 194 (294)
+.++.+||++|+.+++.. .+|. ||||++|+...+++|++.+|+|.+.++ + .+|+|++
T Consensus 7 ~~~~~vFG~~L~~~~~~~-~vP~~v~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~--~---~~d~~~v 80 (201)
T 3msx_B 7 PMPGQLFGISLPNICEND-NLPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHL--D---CESIFVI 80 (201)
T ss_dssp ---CCCTTSCHHHHSGGG-CCCHHHHHHHHHHHHHGGGSTTTTTSCCCHHHHHHHHHHHHHTCCCCT--T---SSCHHHH
T ss_pred CCCCCeeCCcHHHHhcCC-CCCHHHHHHHHHHHHhCCCCCCeeeeCCCHHHHHHHHHHhccCCCCCC--C---cccHHHH
Confidence 456889999998765533 4555 999999999999999999999876433 2 3799999
Q ss_pred HHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchh
Q psy5716 195 SSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLA 274 (294)
Q Consensus 195 a~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLA 274 (294)
|++||.|||+||+||+|.++|+.|+.+.+..+.+++++.++.++.+||+.|+.+|+||+.||++|++|++.|+|++.|||
T Consensus 81 a~lLK~flreLp~pLl~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa 160 (201)
T 3msx_B 81 ASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLA 160 (201)
T ss_dssp HHHHHHHHHTSTTTTTTGGGHHHHHHGGGSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHccccHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccCCCC
Q psy5716 275 IMFGPTLVRAGDDN 288 (294)
Q Consensus 275 ivf~P~L~~~~~~~ 288 (294)
+||||+|+|++++.
T Consensus 161 ~vf~P~ll~~~~~~ 174 (201)
T 3msx_B 161 VCVAPSILWPPASS 174 (201)
T ss_dssp HHHHHHHCCCCTTS
T ss_pred hhhhccccCCCCCC
Confidence 99999999997754
No 5
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=271.08 Aligned_cols=154 Identities=33% Similarity=0.571 Sum_probs=137.4
Q ss_pred CCCCcccccccccccc-ccccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHH
Q psy5716 133 PPGSNIGVPLQHCVSV-NLLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVI 194 (294)
Q Consensus 133 ~~~~~fgv~L~~~~~~-~~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~v 194 (294)
..+.+||++|+..+.. ...+|. ||||++|+..++++|++.+|+|.+. ++.+..+.|+|+|
T Consensus 15 ~~~~vFG~~L~~~~~~~~~~vP~~v~~~i~~l~~~gl~~eGIfR~~G~~~~i~~L~~~~~~~~~~--~~~~~~~~dvh~v 92 (214)
T 3byi_A 15 IKDQIFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKL--NLDDSQWEDIHVV 92 (214)
T ss_dssp CCCCSTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCCC--CTTSGGGCSHHHH
T ss_pred CcCCccCCcHHHHHHHcCCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCC--CCCcccccchHHH
Confidence 3467999999864433 345554 9999999999999999999998754 3333345699999
Q ss_pred HHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchh
Q psy5716 195 SSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLA 274 (294)
Q Consensus 195 a~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLA 274 (294)
|++||.|||+||+||+|+++|+.|+++.+..+.++++..++.++.+||+.|+.+|+||+.||++|+++++.|+|++.|||
T Consensus 93 a~lLK~flreLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM~~~NLa 172 (214)
T 3byi_A 93 TGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLG 172 (214)
T ss_dssp HHHHHHHHHHSSSCSSCHHHHHHHHHHHTSSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcccCCCCCHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccCCCC
Q psy5716 275 IMFGPTLVRAGDDN 288 (294)
Q Consensus 275 ivf~P~L~~~~~~~ 288 (294)
+||||+|+|++.++
T Consensus 173 ~vf~P~Ll~~~~~~ 186 (214)
T 3byi_A 173 IVFGPTLLRAENET 186 (214)
T ss_dssp HHHHHHHHCCTTSS
T ss_pred HHhccccCCCCCcc
Confidence 99999999997665
No 6
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=100.00 E-value=4.2e-37 Score=263.16 Aligned_cols=152 Identities=33% Similarity=0.556 Sum_probs=134.1
Q ss_pred CCCCCcccccccccccccc---ccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcch
Q psy5716 132 YPPGSNIGVPLQHCVSVNL---LCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDV 191 (294)
Q Consensus 132 ~~~~~~fgv~L~~~~~~~~---~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv 191 (294)
+.++++||++|+.++.... .+|. ||||++|+..++++|++.+|+|.+.++. .+.|+
T Consensus 3 ~~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~----~~~d~ 78 (198)
T 1tx4_A 3 PLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFD----QYNAL 78 (198)
T ss_dssp CCTTCCTTSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGG----GSSCT
T ss_pred CCCCCccCCcHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCCeeecCCcHHHHHHHHHHHhCCCCCCcc----ccccc
Confidence 3456789999987665442 5665 9999999999999999999998765432 23699
Q ss_pred HHHHHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCcc
Q psy5716 192 NVISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEAR 271 (294)
Q Consensus 192 ~~va~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~ 271 (294)
|++|++||.|||+||+||+|.++|+.|+++.+. +.+++++.++.++.+||+.|+.+|+||+.||++|+++++.|||++.
T Consensus 79 ~~~a~lLK~flreLpePLi~~~l~~~~~~~~~~-~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~ 157 (198)
T 1tx4_A 79 HLPAVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNT 157 (198)
T ss_dssp HHHHHHHHHHHHHSSSCTTCGGGHHHHHTGGGS-CGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHH
T ss_pred hHHHHHHHHHHHHCCCcCCCHHHHHHHHHHHcC-CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHH
Confidence 999999999999999999999999999998764 5678899999999999999999999999999999999999999999
Q ss_pred chhHhhcccccccCCCC
Q psy5716 272 NLAIMFGPTLVRAGDDN 288 (294)
Q Consensus 272 nLAivf~P~L~~~~~~~ 288 (294)
|||+||||+|+|++++.
T Consensus 158 nLa~vf~P~Ll~~~~~~ 174 (198)
T 1tx4_A 158 NLAVVFGPNLLWAKDAA 174 (198)
T ss_dssp HHHHHHHHHHCCCSSHH
T ss_pred HHHhhhcccccCCCCcc
Confidence 99999999999997643
No 7
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=267.44 Aligned_cols=155 Identities=26% Similarity=0.499 Sum_probs=134.4
Q ss_pred CCCCCccccccccccc-cccccCC----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHH
Q psy5716 132 YPPGSNIGVPLQHCVS-VNLLCPF----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVI 194 (294)
Q Consensus 132 ~~~~~~fgv~L~~~~~-~~~~~p~----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~v 194 (294)
...+++||++|+..+. ....+|. ||||++|+..++++|++.||++...++.. +....|+|+|
T Consensus 16 ~~~~~vFG~~L~~~~~~~~~~vP~iv~~~i~~i~~~gl~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~-~~~~~dvh~v 94 (229)
T 3iug_A 16 FQGERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIVDGIYRLSGVASNIQRLRHEFDSEHVPDLTK-EPYVQDIHSV 94 (229)
T ss_dssp --CCCSTTSCHHHHHHHHCCSSCHHHHHHHHHHHHHCCSTTTTTSCCCHHHHHHHHHHHHTTCCCCTTS-TTTTTCHHHH
T ss_pred CCCCCeECcchHHHHHhcCCCCCHHHHHHHHHHHHcCCCCCCeecCCcHHHHHHHHHHHhcCCCCCccc-cccccchHHH
Confidence 4567899999975333 3344554 99999999999999999999987654432 2223699999
Q ss_pred HHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchh
Q psy5716 195 SSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLA 274 (294)
Q Consensus 195 a~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLA 274 (294)
|++||+|||+||+||+|+++|+.|+++.+..+.++++..++.++.+||+.|+.+|+||+.||++|+++++.|+|++.|||
T Consensus 95 a~lLK~fLreLPePLl~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA 174 (229)
T 3iug_A 95 GSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLA 174 (229)
T ss_dssp HHHHHHHHHHCSSCTTCTTTHHHHHHHHTSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHH
T ss_pred HHHHHHHHHHCCCCCcCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccCCC
Q psy5716 275 IMFGPTLVRAGDD 287 (294)
Q Consensus 275 ivf~P~L~~~~~~ 287 (294)
+||||+|+|+++.
T Consensus 175 ivf~P~Ll~~~~~ 187 (229)
T 3iug_A 175 IVWAPNLLRSKQI 187 (229)
T ss_dssp HHHHHHHCCC---
T ss_pred HHHhccccCCCcc
Confidence 9999999999753
No 8
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=100.00 E-value=8.6e-37 Score=267.15 Aligned_cols=148 Identities=29% Similarity=0.487 Sum_probs=124.0
Q ss_pred cccccccccCC---ceeecCCCHHHHHHHHH-HHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCCCCCcchHHHHH
Q psy5716 144 HCVSVNLLCPF---LFPRVPGNTAAVSSLTE-AVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLLTTELYPHFI 219 (294)
Q Consensus 144 ~~~~~~~~~p~---GIfR~~g~~~~i~~l~~-~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~pLi~~~~~~~~~ 219 (294)
.|+.+++..+. ||||++|+..+|++|++ .+|.+...++++.+...+|+|+||++||+|||+||+||+|+++|+.|+
T Consensus 43 ~ci~~le~~gl~~eGIfR~sG~~~~v~~l~~~~~d~~~~~~~~l~~~~~~dvh~va~lLK~flReLPePLl~~~ly~~~~ 122 (231)
T 1f7c_A 43 KCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFI 122 (231)
T ss_dssp HHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHCC------CCCCCTTSCHHHHHHHHHHHHHTSSSCTTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeeeeCCcHHHHHHHHHHHhCcCCCcccCccccccccHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Confidence 34444433333 99999999999999986 578765333555444458999999999999999999999999999999
Q ss_pred HhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhHhhcccccccCCCCccc
Q psy5716 220 QADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDNMVT 291 (294)
Q Consensus 220 ~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAivf~P~L~~~~~~~~~~ 291 (294)
.+.+..+.++++..++.++.+||+.|+.+|+||+.||++|++|++.|+|++.|||+||||+|+|++.+++..
T Consensus 123 ~~~~~~~~~~r~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~~~~ 194 (231)
T 1f7c_A 123 KAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAA 194 (231)
T ss_dssp HHHTCSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHSCC---CCSG
T ss_pred HHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccccCCCCcccHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998766543
No 9
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=267.77 Aligned_cols=153 Identities=27% Similarity=0.385 Sum_probs=136.0
Q ss_pred CCCCCCcccccccccccc-ccccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchH
Q psy5716 131 PYPPGSNIGVPLQHCVSV-NLLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVN 192 (294)
Q Consensus 131 ~~~~~~~fgv~L~~~~~~-~~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~ 192 (294)
....+++||+||+..++. ...+|. ||||++|+..+|++|++.++.+.+. ++++ .+|+|
T Consensus 14 ~~~~~~vFGv~L~~~~~~~~~~vP~~v~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~-~~~~---~~~~~ 89 (228)
T 3kuq_A 14 LYFQGSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDC-VNYE---GQSAY 89 (228)
T ss_dssp CBCTTSSTTCCHHHHHHHHSSSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHTBSSSC-CCCT---TCCHH
T ss_pred CCCCCCEECCchHHHHHHcCCCCCHHHHHHHHHHHHhCCCcCCeeecCCCHHHHHHHHHHHhcCCCc-CCcc---cCCHH
Confidence 446678999999865433 345665 9999999999999999999876443 3333 37999
Q ss_pred HHHHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccc
Q psy5716 193 VISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARN 272 (294)
Q Consensus 193 ~va~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~n 272 (294)
+||++||.|||+||+||||+++|+.|+.+.+..+.+++++.++.++.+||+.|+.+|+||+.||++|+++++.|+|++.|
T Consensus 90 ~va~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 169 (228)
T 3kuq_A 90 DVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTN 169 (228)
T ss_dssp HHHHHHHHHHHHSSSCTTCSSHHHHHHHHHHHSCGGGHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhccccCCchhH
Confidence 99999999999999999999999999999988888999999999999999999999999999999999999999999999
Q ss_pred hhHhhcccccccCCC
Q psy5716 273 LAIMFGPTLVRAGDD 287 (294)
Q Consensus 273 LAivf~P~L~~~~~~ 287 (294)
||+||||+|||++..
T Consensus 170 LAivf~P~Ll~~~~~ 184 (228)
T 3kuq_A 170 LAVCLAPSLFHLNTL 184 (228)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred hHHHHhhhhcCCCCC
Confidence 999999999998654
No 10
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=100.00 E-value=4.6e-36 Score=264.23 Aligned_cols=153 Identities=33% Similarity=0.576 Sum_probs=134.6
Q ss_pred CCCCCCcccccccccccccc---ccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcc
Q psy5716 131 PYPPGSNIGVPLQHCVSVNL---LCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSD 190 (294)
Q Consensus 131 ~~~~~~~fgv~L~~~~~~~~---~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~d 190 (294)
...++.+||++|+.++.... .+|. ||||++|+..++++|++.||+|.+.++. .+.|
T Consensus 38 ~~~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~----~~~d 113 (242)
T 1ow3_A 38 PPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFD----QYNE 113 (242)
T ss_dssp -CCTTCCSSSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGG----GSSC
T ss_pred CCCCCCccCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHcCCCCCceeeeCCcHHHHHHHHHHHhcCCCCCcc----cccc
Confidence 34567899999986655432 5565 9999999999999999999998765432 2369
Q ss_pred hHHHHHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCc
Q psy5716 191 VNVISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEA 270 (294)
Q Consensus 191 v~~va~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~ 270 (294)
+|++|++||.|||+||+||+|+++|+.|+++.+. +.+++++.++.++.+||+.|+.+|+||+.||++|+++++.|+|++
T Consensus 114 v~~va~lLK~flReLPePLl~~~ly~~~~~~~~~-~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~ 192 (242)
T 1ow3_A 114 LHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTN 192 (242)
T ss_dssp THHHHHHHHHHHHHSSSCTTCGGGHHHHHTGGGS-CGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCH
T ss_pred hHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcC-CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCcCCCCH
Confidence 9999999999999999999999999999998774 567889999999999999999999999999999999999999999
Q ss_pred cchhHhhcccccccCCCC
Q psy5716 271 RNLAIMFGPTLVRAGDDN 288 (294)
Q Consensus 271 ~nLAivf~P~L~~~~~~~ 288 (294)
.|||+||||+|+|++++.
T Consensus 193 ~NLAivf~P~Ll~~~~~~ 210 (242)
T 1ow3_A 193 TNLAVVFGPNLLWAKDAA 210 (242)
T ss_dssp HHHHHHHHHHHCCCSSHH
T ss_pred HHhHHhhcchhCCCCCcc
Confidence 999999999999997643
No 11
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=100.00 E-value=2e-36 Score=262.33 Aligned_cols=130 Identities=22% Similarity=0.425 Sum_probs=120.3
Q ss_pred ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCCCCCcchHHHHHHhhc-CCCHHHHHHH
Q psy5716 155 LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLLTTELYPHFIQADK-IEDPATRMAT 233 (294)
Q Consensus 155 GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~pLi~~~~~~~~~~~~~-~~~~~~~~~~ 233 (294)
||||++|+..+ ++|++.||+|... +++.+ +|+|+||++||+|||+||+||||+++|+.|+++.+ ..+.+++++.
T Consensus 45 GIfR~sG~~~~-~~l~~~~d~~~~~-~~~~~---~dv~~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~ 119 (216)
T 1pbw_A 45 TLYRTQSSSNL-AELRQLLDCDTPS-VDLEM---IDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQL 119 (216)
T ss_dssp TTTSSCCSCCT-THHHHHSCSSSSC-CCGGG---BCHHHHHHHHHHHHHTSSSCSSCHHHHHHHHHHGGGCCSHHHHHHH
T ss_pred CeeeCCChHHH-HHHHHHHHcCCCC-CCccc---cCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999 9999999997532 33332 79999999999999999999999999999999985 6788899999
Q ss_pred HHHHHh--hCChhHHHHHHHHHHHHHHHHhcccccCCCccchhHhhcccccccCCCCc
Q psy5716 234 IKKLVH--ELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDNM 289 (294)
Q Consensus 234 l~~ll~--~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAivf~P~L~~~~~~~~ 289 (294)
++.++. +||+.|+.+|+||+.||++|++|++.|+|++.|||+||||+|+|+++++.
T Consensus 120 l~~ll~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAivf~P~Ll~~~~~~~ 177 (216)
T 1pbw_A 120 LKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASS 177 (216)
T ss_dssp HHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHTCSSCCH
T ss_pred HHHHHhhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHhhhcCCCCCCch
Confidence 999999 99999999999999999999999999999999999999999999987764
No 12
>2ovj_A Mgcracgap, RAC GTPase-activating protein 1; signaling protein, structural genomics, structural genomics consortium, SGC; HET: 7PE; 1.49A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=254.29 Aligned_cols=151 Identities=32% Similarity=0.465 Sum_probs=134.4
Q ss_pred CCCccccccccccccccccCC---ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCCCC
Q psy5716 134 PGSNIGVPLQHCVSVNLLCPF---LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLL 210 (294)
Q Consensus 134 ~~~~fgv~L~~~~~~~~~~p~---GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~pLi 210 (294)
.+...+..+..|+.+++..+. ||||++|+..++++|++.||+|.+.. ++. .+.|+|+||++||.|||+||+||+
T Consensus 13 ~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~~~~~~~~-~~~--~~~d~h~va~lLK~flreLpePLi 89 (201)
T 2ovj_A 13 TSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVP-LLS--KVDDIHAICSLLKDFLRNLKEPLL 89 (201)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCSCC-CGG--GCCCHHHHHHHHHHHHHTSSSCTT
T ss_pred cCCCCChHHHHHHHHHHHhCCCcCceeeeCCcHHHHHHHHHHHHcCCCCc-ccc--ccCCHHHHHHHHHHHHHhCCCCCC
Confidence 455667778899998865555 99999999999999999999986541 121 235999999999999999999999
Q ss_pred CcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhHhhcccccccCCCC
Q psy5716 211 TTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDN 288 (294)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAivf~P~L~~~~~~~ 288 (294)
|.++|+.|+++.+..+.++++..++.++.+||+.|+.+|+||+.||++|+++ +.|||++.|||+||||+|+|++.++
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~-~~NkM~~~NLa~vf~P~ll~~~~~~ 166 (201)
T 2ovj_A 90 TFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVAQS-PHTKMDVANLAKVFGPTIVAHAVPN 166 (201)
T ss_dssp CTTTHHHHHHHHHCSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHC-TTSCCCHHHHHHHHHHHHTCCSSSS
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHhhhhhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999996 6899999999999999999986544
No 13
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=258.34 Aligned_cols=149 Identities=26% Similarity=0.417 Sum_probs=121.9
Q ss_pred CCCCCcccccccccccc----ccccCC----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcch
Q psy5716 132 YPPGSNIGVPLQHCVSV----NLLCPF----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDV 191 (294)
Q Consensus 132 ~~~~~~fgv~L~~~~~~----~~~~p~----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv 191 (294)
..++.+||++|+.++.. ...+|. ||||++|+...+++|++.||+|.+. .. ..|+
T Consensus 59 ~~~~~vFGv~L~~l~~~~~~~~~~iP~~l~~~~~~le~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~-~~-----~~~~ 132 (271)
T 3eap_A 59 EIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTSLEDHIHTEGLFRKSGSVIRLKALKNKVDHGEGC-LS-----SAPP 132 (271)
T ss_dssp --CCSSTTSCGGGSCEEEETTTEEEEHHHHHHHHHHGGGTTC--------CHHHHHHHHHHHHHC-----------CCCH
T ss_pred CCCCCeeCCcHHHHHhhccCCCCCcChHHHHHHHHHHhCCCCCCeeeeCCCHHHHHHHHHHHHcCCCC-cc-----cccH
Confidence 45688999999976543 133553 9999999999999999999998764 21 2799
Q ss_pred HHHHHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCcc
Q psy5716 192 NVISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEAR 271 (294)
Q Consensus 192 ~~va~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~ 271 (294)
|+||++||.|||+||+||||+++|+.|+.+.+.. .+++...++.++..||+.|+.+|+||+.||++|+++++.|+|++.
T Consensus 133 ~~va~lLK~fLReLPePLl~~~ly~~~~~~~~~~-~~~~~~~~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~ 211 (271)
T 3eap_A 133 CDIAGLLKQFFRELPEPILPADLHEALLKAQQLG-TEEKNKATLLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSS 211 (271)
T ss_dssp HHHHHHHHHHHHHSSSCSSCGGGHHHHHHHTTSC-HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHH
T ss_pred HHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHh-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCCCHH
Confidence 9999999999999999999999999999998864 466888899999999999999999999999999999999999999
Q ss_pred chhHhhcccccccCCC
Q psy5716 272 NLAIMFGPTLVRAGDD 287 (294)
Q Consensus 272 nLAivf~P~L~~~~~~ 287 (294)
|||+||||+|||++++
T Consensus 212 NLAivf~P~Ll~~~~~ 227 (271)
T 3eap_A 212 NLAVIFAPNLLQTSEG 227 (271)
T ss_dssp HHHHHHHHHHHTCCCC
T ss_pred HHHHHHHhHhccCCCC
Confidence 9999999999999763
No 14
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=100.00 E-value=4e-34 Score=273.89 Aligned_cols=156 Identities=32% Similarity=0.521 Sum_probs=136.7
Q ss_pred CCCccccccccccccc-cccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHH
Q psy5716 134 PGSNIGVPLQHCVSVN-LLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVIS 195 (294)
Q Consensus 134 ~~~~fgv~L~~~~~~~-~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va 195 (294)
...+||++|+..+... ..+|. ||||++|+...|++|++.||++.+. .++....+.|+|+||
T Consensus 266 ~~~vFG~~L~~~~~~~~~~vP~iv~~~i~~le~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~-~~~~~~~~~dv~~va 344 (463)
T 3cxl_A 266 VKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEK-ADISVNMYEDINIIT 344 (463)
T ss_dssp CCCCTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHCSCSTTTTTSCCCHHHHHHHHHHHHHHGGG-CCCSTTTCCCHHHHH
T ss_pred cccccccccchhhhccCCCCCeeHHHHHHHHHhcCCCCCceeEecCCHHHHHHHHHHHHhcCCc-CCcccccCCCcchhh
Confidence 4578999998655432 34554 9999999999999999999985432 222222347999999
Q ss_pred HHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhH
Q psy5716 196 SLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAI 275 (294)
Q Consensus 196 ~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAi 275 (294)
++||+|||+||+||||+++|+.|+++.+..+.+++++.++.++.+||+.|+.+|.||+.||++|+++++.|+|++.|||+
T Consensus 345 ~lLK~flReLPePLi~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAi 424 (463)
T 3cxl_A 345 GALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI 424 (463)
T ss_dssp HHHHHHHHHCSSCSSCTTTHHHHHHHHHCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHH
T ss_pred hHHHHHHHhcCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccCCCCcc
Q psy5716 276 MFGPTLVRAGDDNMV 290 (294)
Q Consensus 276 vf~P~L~~~~~~~~~ 290 (294)
||||+|+++++++..
T Consensus 425 vf~P~Ll~~~~~~~~ 439 (463)
T 3cxl_A 425 VFGPTLMRSPELDAM 439 (463)
T ss_dssp HHHHHHCCCCCSCTT
T ss_pred HhhccccCCCCccHH
Confidence 999999999876543
No 15
>2xs6_A Phosphatidylinositol 3-kinase regulatory subunit; structural genomics consortium, SGC, transferase; 2.09A {Homo sapiens}
Probab=99.98 E-value=3.7e-34 Score=247.14 Aligned_cols=140 Identities=24% Similarity=0.189 Sum_probs=106.2
Q ss_pred CCCCcccccccccccc--c-cccCC-----------------ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchH
Q psy5716 133 PPGSNIGVPLQHCVSV--N-LLCPF-----------------LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVN 192 (294)
Q Consensus 133 ~~~~~fgv~L~~~~~~--~-~~~p~-----------------GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~ 192 (294)
...++||++|+.+++. . ..+|. ||||++|+. |++ .+.. .++. ..|+|
T Consensus 18 ~~~~vFGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~Gl~~eGIfR~sG~~-----lr~---~~~~--~dl~---~~dvh 84 (214)
T 2xs6_A 18 LYFQSMGLTLPDLPEQFSPPDVAPPLLVKLVEAIERTGLDSESHYRPELPA-----PRT---DWSL--SDVD---QWDTA 84 (214)
T ss_dssp -------CCCCCHHHHCCTTCCSCHHHHHHHHHHHHHCTTCSGGGCCSCCC-----CCC---CCCC--TTGG---GCCHH
T ss_pred CCCcccCcCHHHHHHhhCCCCCCCHHHHHHHHHHHHhCCCCCCCeeeCHHH-----HHh---cccc--CCCc---cCCHH
Confidence 3456888888766552 1 34554 999999998 333 1111 2322 38999
Q ss_pred HHHHHHHHHHhhCCCCCCCcchHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccc
Q psy5716 193 VISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARN 272 (294)
Q Consensus 193 ~va~lLK~fLreLP~pLi~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~n 272 (294)
+||++||+|||+||+||||+++|+.|+++.+..+..+++. .++.+||+.|+.+|+||+.||++|+++++.|||++.|
T Consensus 85 ~va~lLK~flReLPePLi~~~ly~~~i~~~~~~~~~~~~~---~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 161 (214)
T 2xs6_A 85 ALADGIKSFLLALPAPLVTPEASAEARRALREAAGPVGPA---LEPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRA 161 (214)
T ss_dssp HHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHCC--CCGGG---GSTTTSCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHcccccCCCHHH
Confidence 9999999999999999999999999999988766554444 7899999999999999999999999999999999999
Q ss_pred hhHhhcccccccCCCC
Q psy5716 273 LAIMFGPTLVRAGDDN 288 (294)
Q Consensus 273 LAivf~P~L~~~~~~~ 288 (294)
||+||||+|+|+++++
T Consensus 162 LAivf~P~Ll~~~~~~ 177 (214)
T 2xs6_A 162 LGATFGPLLLRAPPPP 177 (214)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHHHHhhhhcCCcccc
Confidence 9999999999998754
No 16
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=99.97 E-value=2.3e-31 Score=247.33 Aligned_cols=142 Identities=17% Similarity=0.324 Sum_probs=124.4
Q ss_pred CccccccccccccccccCC---ceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCCCCCc
Q psy5716 136 SNIGVPLQHCVSVNLLCPF---LFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLLTT 212 (294)
Q Consensus 136 ~~fgv~L~~~~~~~~~~p~---GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~pLi~~ 212 (294)
..++..+..|+.+++..++ ||||++|+..++++|++.+|+|...++ ..|+|++|++||+|||+||+||||+
T Consensus 197 ~~iP~~v~~~i~~l~~~Gl~~eGIFR~~G~~~~v~~L~~~~d~~~~~~~------~~dvh~va~lLK~fLReLPePLi~~ 270 (366)
T 3qis_A 197 LQVPKEIWLLVDHLFKYACHQEDLFQTPGMQEELQQIIDCLDTSIPETI------PGSNHSVAEALLIFLEALPEPVICY 270 (366)
T ss_dssp CSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHHCCCSSC------CSCHHHHHHHHHHHHHHCSSCSSCH
T ss_pred CCcChHHHHHHHHHHhcCCCCCCeEeCCCCHHHHHHHHHHHcCCCCCcc------ccCHHHHHHHHHHHHHhCCCCCCcH
Confidence 3445556789998866655 999999999999999999999866422 1599999999999999999999999
Q ss_pred chHHHHHHhhcCCCHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhHhhcccccccCCCCc
Q psy5716 213 ELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDNM 289 (294)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAivf~P~L~~~~~~~~ 289 (294)
++|+.|+++.+. .+.++.++.+||+.|+.+|.||+.||++|++|++.|+|++.|||+||||+|||++++++
T Consensus 271 ~ly~~~~~~~~~------~~~~~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA~vf~P~Llr~~~~~~ 341 (366)
T 3qis_A 271 ELYQRCLDSAYD------PRICRQVISQLPRCHRNVFRYLMAFLRELLKFSEYNSVNANMIATLFTSLLLRPPPNLM 341 (366)
T ss_dssp HHHHHHHHHTTC------HHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHSCCCC---
T ss_pred HHHHHHHHHhhh------HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHhhhcccCCCcch
Confidence 999999998763 24678899999999999999999999999999999999999999999999999987664
No 17
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.45 E-value=9.4e-14 Score=109.29 Aligned_cols=57 Identities=23% Similarity=0.346 Sum_probs=53.0
Q ss_pred CCcccccCCceeeecc-cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 4 SCERIDIGHNCVEVAC-DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 4 ~~~~~~l~~~~~~~a~-~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...+|+|.||.++++. ||+||||||+|++. +|.+|||||+|++||.+|+.+|+.++.
T Consensus 66 ~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~-~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 66 PEYTVELRGATLSWAPKDKSSRKNVLELRSR-DGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp EEEEEECTTCEEEECCGGGCSSSSEEEEECT-TSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred CcceEEcCCCEEEecccccCCCceEEEEECC-CCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3578999999999996 99999999999999 999999999999999999999998763
No 18
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.34 E-value=1.8e-12 Score=101.32 Aligned_cols=56 Identities=36% Similarity=0.624 Sum_probs=52.6
Q ss_pred CcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
+.+|+|.+|.++++.||.||+|||+|++. +|.+|+|||++++||++|+.+|+.++.
T Consensus 64 ~~~i~L~~~~v~~~~d~~kr~~~F~l~t~-~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 64 EPSYDLQNAAIEIASDYTKKKHVLRVKLA-NGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp CCBCCCSSCCCEECCSSSSSTTEEEEECS-SSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CceEECCCCEEEeCCCCCCCCeEEEEEEc-CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999998 899999999999999999999998764
No 19
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.31 E-value=3.1e-12 Score=101.19 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=53.0
Q ss_pred CcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 5 CERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
...|+|.||.++++.+|.+|+|||+|.+. +|.+|+|||++++||++||.+|+.++..
T Consensus 69 ~g~I~L~~~~v~~~~~~~kr~~~F~l~t~-~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 69 ESSVDLRGAALAHGRHLSSRRNVLHIRTI-PGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp SEEEECTTCEEEECTTSCSSSSEEEEECT-TSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEeCCcEEEECCCCCCCCcEEEEEcC-CCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 34799999999999999999999999999 9999999999999999999999998754
No 20
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.22 E-value=3.1e-11 Score=94.21 Aligned_cols=58 Identities=31% Similarity=0.496 Sum_probs=53.7
Q ss_pred CCcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 4 SCERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 4 ~~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
...+|+|.+|.++++.+|.+|+|||+|.+. +|.+|+|||++++||++|+.+|+.++..
T Consensus 61 ~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~-~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 61 GEVPVSLARAQGSVAFDYRKRKHVFKLGLQ-DGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp SCCCEECTTCEEEECTTCSSCSSEEEEECS-SSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceEEccCcEEeecccccCCCCEEEEEEc-CCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 345799999999999999999999999998 8899999999999999999999998754
No 21
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.17 E-value=2.3e-11 Score=107.94 Aligned_cols=59 Identities=17% Similarity=0.314 Sum_probs=54.9
Q ss_pred CCcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 4 SCERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 4 ~~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
...+|+|.||.++++.||+||||||+|++. +|.+|||||++.+||+.|+.+|+.+++..
T Consensus 68 p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~-~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 68 PKHAVWVENSIVQAVPEHPKKDFVFCLSNS-LGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp CSSCCBCCSCEECCCTTSSSSCSCCCEEET-TTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEeccCcEEEeccccCCCCcEEEEEcC-CCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 456799999999999999999999999999 99999999999999999999999887644
No 22
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.09 E-value=1.5e-10 Score=89.13 Aligned_cols=56 Identities=20% Similarity=0.309 Sum_probs=50.0
Q ss_pred CcccccCCceee--ecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVE--VACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~--~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...|+|.|+.|. .+.++.+|+|||+|.+. ++.+|+|||+|++||++||.+|+.++.
T Consensus 44 ~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~-~~~~y~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 44 LLSVNMGGEQCGGCRRANTTDRPHAFQVILS-DRPCLELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp SEEEETTC-CEEEEEECCCSSCTTEEEEEET-TSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cceEEecCCEEEeeeccCCCCCCeEEEEEcC-CCCEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 456899999988 67899999999999988 899999999999999999999998764
No 23
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.07 E-value=2.3e-10 Score=89.73 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=51.7
Q ss_pred CcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...|+|.|+.|+ ..|+.+|+|||+|.+.++|.+|+|||+++++|.+|+++|+.++.
T Consensus 57 ~~~i~L~g~~V~-~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 57 GKKVSIVGWMVQ-LPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp SEEEECTTCEEE-CCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CceEEeCCCEEE-ecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 447999999998 78999999999999877899999999999999999999999874
No 24
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.03 E-value=5e-10 Score=84.53 Aligned_cols=54 Identities=35% Similarity=0.572 Sum_probs=50.3
Q ss_pred CCcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHH
Q psy5716 4 SCERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQT 58 (294)
Q Consensus 4 ~~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~ 58 (294)
...+|+|.+|.++++.++.+|+|+|+|.+. +|.+|+|||++++||.+|+.+|+.
T Consensus 52 ~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~-~~~~~~~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 52 SEVPVSLKEAICEVALDYKKKKHVFKLRLS-DGNEYLFQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp SCCCEECTTCEEEECSSCCSSSSEEEEECT-TSCEEEEECSSHHHHHHHHHHHHH
T ss_pred CcceEECCCCEEEEcccccCCccEEEEEec-CCCEEEEECCCHHHHHHHHHHHhc
Confidence 355799999999999999999999999998 889999999999999999999986
No 25
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=98.69 E-value=2.6e-08 Score=88.04 Aligned_cols=57 Identities=18% Similarity=0.308 Sum_probs=52.3
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
..|+|.||.+..+.++.+|+|+|+|.+. +|.+|+|||++++||.+|+.+|+.++...
T Consensus 70 g~I~L~~~~v~~~~~~~kk~~~F~I~t~-~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 70 CALFAEDSIVQSVPEHPKKEHVFCLSNS-CGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp EEEECTTCEEEECTTCSSCSSEEEEECT-TSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEcCCcEEEECCcCCCCCCEEEEEcC-CCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 3589999999988899999999999998 89999999999999999999999887654
No 26
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.48 E-value=2.2e-07 Score=76.15 Aligned_cols=53 Identities=32% Similarity=0.540 Sum_probs=47.1
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
+|++.+|.++++.++.+|+|+|+|.+. + .+|+|+|++++||.+|+.+|+.++.
T Consensus 59 ~l~~~~~~~~~~~~~~~~~~~F~I~t~-~-r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 59 PISVNACLIDISYSETKRKNVFRLTTS-D-CECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp CEECSSCEEEECSSSCSCSSEEEEECS-S-CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EecccceEEEeccccCCCCCEEEEEeC-C-ceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 466666888899999999999999987 4 7899999999999999999998764
No 27
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.37 E-value=1.5e-06 Score=66.05 Aligned_cols=58 Identities=17% Similarity=0.310 Sum_probs=50.3
Q ss_pred cccccCCceeee-cccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhcc
Q psy5716 6 ERIDIGHNCVEV-ACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQS 64 (294)
Q Consensus 6 ~~~~l~~~~~~~-a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~~ 64 (294)
..|+|.++.+.. ..+..+++|+|+|.+. ++..|+|+|+++.|+..|+.+|+.++....
T Consensus 46 g~i~L~~~~~~~~~~~~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 46 GMIPLKGSTLTSPCQDFGKRMFVFKITTT-KQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp EEEESSSCCEESSCCSSCCSSSEEEEEET-TTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEcCCCEEEEecCCCCCCccEEEEEcC-CCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 458899988874 5678889999999998 789999999999999999999999876543
No 28
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.36 E-value=6.7e-07 Score=67.56 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=44.3
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
.|+|.+|.+....+ .+++|+|+|.+. ++..|.|+|++++|+..|+.+|+.+.
T Consensus 49 ~i~l~~~~v~~~~~-~~~~~~F~i~~~-~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 49 PLSLVGCEVVPDPS-PDHLYSFRILHK-GEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp EECTTTCEEECCCB-TTBSCEEEEEET-TEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred EEeccceEEEECCC-CCCCeEEEEEeC-CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 56778887766543 688999999997 67889999999999999999999875
No 29
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.36 E-value=8.7e-07 Score=66.98 Aligned_cols=55 Identities=20% Similarity=0.242 Sum_probs=48.9
Q ss_pred CcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 5 CERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
...|+|.++.+....+..+++|+|+|.+. ++..|+|+|+++.|+..|+.+|+.++
T Consensus 48 ~~~i~L~~~~~~~~~~~~~~~~~F~i~~~-~~~~~~~~a~s~~e~~~Wi~al~~a~ 102 (109)
T 1wgq_A 48 LESQPLLGFTVTLVKDENSESKVFQLLHK-GMVFYVFKADDAHSTQRWIDAFQEGT 102 (109)
T ss_dssp SEEEECSSEEEEECCCSSCSSSEEEEEET-TEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEECCCCEEEECCCCCCCCcEEEEEeC-CCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 34689999998887777788999999987 77889999999999999999999875
No 30
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.35 E-value=1.7e-06 Score=67.48 Aligned_cols=54 Identities=9% Similarity=0.198 Sum_probs=46.0
Q ss_pred cccccCCceeee---cccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEV---ACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~---a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|.|.|++++. ..+..+++++|++... |..|+|+|++++||.+||++|+.++.
T Consensus 54 G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~--~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 54 ELLQLDGYTVDYTDPQPGLEGGRAFFNAVKE--GDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp EEEECSSCEEEECCCCSSCCSCSSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEECCCcEEEEecCCcccccCceEEEEecC--CceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 458899999884 3456789999999875 77899999999999999999999874
No 31
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.34 E-value=8.8e-07 Score=67.95 Aligned_cols=55 Identities=20% Similarity=0.242 Sum_probs=47.0
Q ss_pred CcccccCCceeee--cccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEV--ACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~--a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...|.|.||.+.. ..+..+|+|+|+|.. .+..|.|+|+++++|++|+.+|+.++.
T Consensus 50 ~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~--~~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 50 PRTIPLPSCKLSVPDPEERLDSGHVWKLQW--AKQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp CSEECGGGCEEECCCSSSCCSSSEEEEEEE--TTEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred ceEEEcCCCEEEecCcccccCCCCEEEEec--CCeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 3578999999985 445667999999994 578999999999999999999998763
No 32
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=98.31 E-value=7.1e-07 Score=69.55 Aligned_cols=56 Identities=13% Similarity=0.226 Sum_probs=47.1
Q ss_pred cccccCCceeeecc-cCCcCCCeEEEEecCC-CeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVAC-DYTKRKHVLRLSSPSS-NTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~-~~~krk~vf~l~~~~~-g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
-.|||.+|.++... +..+|+|+|+|.+.+. ...|+|+|++.+||.+||.+|+.++.
T Consensus 62 G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 62 GILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp EEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred cEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence 47899999998765 5678999999998722 35799999999999999999998764
No 33
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.27 E-value=1.5e-06 Score=64.99 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=48.7
Q ss_pred CcccccCCceeeec---ccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 5 CERIDIGHNCVEVA---CDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 5 ~~~~~l~~~~~~~a---~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
...|+|.++.+... .+..+++|+|.|.+. ++..|+|+|++++|+.+|+.+|+.++..
T Consensus 47 ~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 47 KGTFLIKGYSVRMAPHLRRDSKKESCFELTSQ-DRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp SEEEECTTCEEEECGGGCSSGGGGGEEEEECS-SSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecceEEEeCCccccccCCcceEEEEcC-CCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 34589999998765 356678999999998 7799999999999999999999988754
No 34
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.21 E-value=2.7e-06 Score=68.10 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=48.6
Q ss_pred CcccccCCceeeecc-cCCcCCCeEEEEecCC-CeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEVAC-DYTKRKHVLRLSSPSS-NTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~-~~~krk~vf~l~~~~~-g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
--.|||.||.++... ....|++||+|.+.+. -..|.|.|++.++|.+|+++|++++.
T Consensus 90 kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 90 RGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp CEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 357999999999765 5678999999998833 34699999999999999999999864
No 35
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.18 E-value=3.7e-06 Score=64.03 Aligned_cols=55 Identities=18% Similarity=0.261 Sum_probs=46.8
Q ss_pred cccccCCceeeec--ccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVA--CDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a--~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.++.+... .+..+++|+|.|.+. ++..|+|+|++++|+.+|+.+|+.++.
T Consensus 53 g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 53 GSIPLLSFRVAAVQPSDNISRKHTFKAEHA-GVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp EEEECSSCEEEECCTTTTCCCSSEEEEECS-SSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CEEEeCCeEEEEcCccccCCCccEEEEEcC-CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 3688999887643 356789999999877 789999999999999999999998764
No 36
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.13 E-value=3.1e-06 Score=65.16 Aligned_cols=54 Identities=17% Similarity=0.358 Sum_probs=45.8
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
..|+|.+|.+... .+++++|.|.+. ++..|.|+|++++|+..|+.+|+.++...
T Consensus 53 g~I~L~~~~v~~~---~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 106 (120)
T 2d9x_A 53 GTLQLAGAVISPS---DEDSHTFTVNAA-SGEQYKLRATDAKERQHWVSRLQICTQHH 106 (120)
T ss_dssp EEEECTTCCEECC---SSSSSCEEECCS-SSCCEEECCSSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEcceEEEEec---CCCCCEEEEEcC-CCCEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 4689999887653 356799999998 77999999999999999999999877543
No 37
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.11 E-value=5.5e-06 Score=66.23 Aligned_cols=54 Identities=22% Similarity=0.286 Sum_probs=47.0
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.+|.+....+ .+++|+|.|.+. ++..|+|+|+++.|+..|+.+|+.++.
T Consensus 71 g~I~L~~~~~~~~~~-~~~~~~F~i~~~-~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 71 GSIFLDSCMGVVQNN-KVRRFAFELKMQ-DKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp EEECTTTCCEECCCC-SSCTTEEEEECS-SSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cEEecccCEEEecCC-CCCceEEEEEeC-CCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 468999988876533 688999999998 778999999999999999999998764
No 38
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.07 E-value=8e-06 Score=61.31 Aligned_cols=54 Identities=15% Similarity=0.324 Sum_probs=43.2
Q ss_pred cccccCCceeeec-cc----CCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVA-CD----YTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a-~~----~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
..|+|.+|.+... .. ..+++|+|+|.+. ++..|+|+|++++|+.+|+.+|+.++
T Consensus 50 g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~-~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 50 GAIHLRGCVVTSVESNSNGRKSEEENLFEIITA-DEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EEEECTTCEEEEECC--------CCSEEEEECT-TCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEccCCcccccCCCceEEEEEeC-CCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 4589999877533 22 3458999999998 78889999999999999999999864
No 39
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.06 E-value=8.2e-06 Score=63.15 Aligned_cols=54 Identities=17% Similarity=0.286 Sum_probs=46.4
Q ss_pred ccccCCceeeecc--cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 7 RIDIGHNCVEVAC--DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 7 ~~~l~~~~~~~a~--~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.|+|.++.+.... +..+++|+|+|.+. ++..|+|+|++++|+.+|+.+|+.++.
T Consensus 64 ~i~L~~~~v~~~~~~~~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 64 SILLPSFQIALLTSEDHINRKYAFKAAHP-NMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp EECGGGSEEEECCGGGCCSSCSEEEEECS-SSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEcCceEEEEcCCcccCCCCeEEEEEcC-CCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 5788888887643 45688999999998 779999999999999999999998764
No 40
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=8.5e-06 Score=62.53 Aligned_cols=54 Identities=19% Similarity=0.281 Sum_probs=46.3
Q ss_pred cccccCCceeeec--ccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVA--CDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a--~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
..|+|.++.+... .+..+++|+|.|.+. ++..|+|+|+++.|+.+|+.+|+.++
T Consensus 64 g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 64 GSIPLLSFRVAAVQPSDNISRKHTFKAEHA-GVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp EEEESTTCCCEECCTTCSCSSSSEEEEECS-SSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEcCCCEEEEcCccccCCcccEEEEecC-CCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 4688999887643 356788999999877 78999999999999999999999875
No 41
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.02 E-value=1.4e-05 Score=62.49 Aligned_cols=41 Identities=17% Similarity=0.198 Sum_probs=37.1
Q ss_pred cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 20 DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 20 ~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
+..+|+|+|+|.+. +|..|+|+|++++||.+|+.+|+.+..
T Consensus 74 ~~~~~~~~F~I~~~-~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 74 EGRSRDGLLTVNLR-EGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp SSCCTTTEEEEEET-TSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCCcCcEEEEEeC-CCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 46678999999998 788999999999999999999998764
No 42
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.02 E-value=1.2e-05 Score=62.69 Aligned_cols=38 Identities=8% Similarity=0.264 Sum_probs=35.1
Q ss_pred cCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 23 KRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 23 krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.+++.|.|.+. +|..|+|+|++++|+.+|+.+|+.++.
T Consensus 87 ~~~~~F~I~t~-~~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 87 EENFEFLIVSS-TGQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp CCCCCEEEECT-TSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcC-CCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 68899999998 789999999999999999999998764
No 43
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.01 E-value=1.3e-05 Score=62.27 Aligned_cols=55 Identities=15% Similarity=0.275 Sum_probs=45.9
Q ss_pred cccccCCceeeeccc-----CCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACD-----YTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~-----~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.+|.+....+ ..+++++|.|.+. ++..|+|+|++++|+.+|+.+|+.++.
T Consensus 61 g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~-~~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 61 GAIHLRGCVVTSVESNSNGRKSEEENLFEIITA-DEVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp EEEECTTCEEEECCCCCCSSSCSSCSEEEEECT-TCCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEEccCCEEEEccCCccccccCCCeEEEEEcC-CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 358999988774432 2358999999998 778899999999999999999999874
No 44
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.01 E-value=1.6e-05 Score=60.15 Aligned_cols=55 Identities=20% Similarity=0.326 Sum_probs=46.6
Q ss_pred ccccCCc-eeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 7 RIDIGHN-CVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 7 ~~~l~~~-~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
.|+|.++ .++...+..+++++|.|.+. +..|+|+|++++|+.+|+.+|+.++...
T Consensus 50 ~i~L~~~~~v~~~~~~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 50 DILLDENCCVESLPDKDGKKCLFLVKCF--DKTFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EECCCTTCEEEEECCCTTCCSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCcEEEEECCCCCCCeeEEEEEeC--CCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 5788874 56777777889999999876 6789999999999999999999987543
No 45
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=97.98 E-value=1.1e-05 Score=62.54 Aligned_cols=55 Identities=13% Similarity=0.246 Sum_probs=43.4
Q ss_pred cccccCCceeeecc-cCCc-------CCCeEEEEecCC-----CeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVAC-DYTK-------RKHVLRLSSPSS-----NTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a~-~~~k-------rk~vf~l~~~~~-----g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
-.|.|.||++.... +..+ +++.|.|...+. +..|.|+|++.+||++|+.+|+.++
T Consensus 50 gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 50 MSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 56889999998643 3332 788999988832 3699999999999999999999874
No 46
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.98 E-value=1.4e-05 Score=61.41 Aligned_cols=55 Identities=15% Similarity=0.217 Sum_probs=47.1
Q ss_pred cccccCCceeeecc--cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVAC--DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~--~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.++.+.... +..+++++|.|.+. ++..|+|+|++++|+..|+.+|+.++.
T Consensus 53 g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 53 GSVLLPSYNIRPDGPGAPRGRRFTFTAEHP-GMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp EEEEGGGCEEEECCSSCTTSSSSEEEEECT-TSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred eEEECCCCEEEECCCCccCCCcEEEEEECC-CCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 35789998888764 34668999999988 779999999999999999999999764
No 47
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.97 E-value=1.1e-05 Score=64.42 Aligned_cols=56 Identities=13% Similarity=0.201 Sum_probs=47.4
Q ss_pred cccccCCceeeeccc---CCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 6 ERIDIGHNCVEVACD---YTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~---~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
..|+|.++.+..+.+ ..+++|+|+|.+. ++..|+|+|+++.++..|+.+|+.++..
T Consensus 62 g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~-~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 120 (148)
T 1u5f_A 62 GEFAIDGYDVRMNNTLRKDGKKDCCFEICAP-DKRIYQFTAASPKDAEEWVQQLKFILQD 120 (148)
T ss_dssp EEEECTTCEEEECTTSCSSTTGGGEEEEECT-TSCEEEEECSSHHHHHHHHHHHHHHCC-
T ss_pred eEEEcCCcEEEECCCcccCCCCccEEEEECC-CCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 458999998886543 5677899999998 7799999999999999999999998643
No 48
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=97.96 E-value=9.7e-06 Score=61.33 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=36.0
Q ss_pred ccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 19 CDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 19 ~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
.+..+++|+|.|.+. ++..|+|+|++++|+..|+.+|+.+.
T Consensus 70 ~~~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 70 PDGKSKDCMLQIVCR-DGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp STTCCGGGEEEEEET-TSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCCcCcEEEEEec-CCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 345566899999987 78999999999999999999999864
No 49
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.94 E-value=2.1e-05 Score=59.73 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=45.6
Q ss_pred cccccCCceeeec-c-cCCcCCCeEEEEecC------CCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVA-C-DYTKRKHVLRLSSPS------SNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a-~-~~~krk~vf~l~~~~------~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.+|.+... . +..+++|+|+|.+.+ ++..|+|+|+++.|+.+|+.+|+.++.
T Consensus 49 g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 49 GCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 4688999887633 2 356679999999831 578999999999999999999999874
No 50
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=97.92 E-value=2e-05 Score=60.87 Aligned_cols=55 Identities=16% Similarity=0.154 Sum_probs=46.2
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
..|+|.+|.+-...+..+++|+|.|.+. +..|+|+|++++|+.+|+.+|+.++..
T Consensus 59 g~i~L~~~~~v~~~~~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 59 RILDLTECSAVQFDYSQERVNCFCLVFP--FRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp EEEEGGGCCEEEEECSSSSSSEEEEEET--TEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred eEEEccceEEEEecccCCCCCEEEEEeC--CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 4688988885444556788999999976 789999999999999999999988753
No 51
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.92 E-value=1.1e-05 Score=62.53 Aligned_cols=54 Identities=17% Similarity=0.312 Sum_probs=44.5
Q ss_pred cccccCCceeeecccC-----Cc---CCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVACDY-----TK---RKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~-----~k---rk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
..|+|.+|.+....+. .+ ++++|+|.+. ++..|+|+|++++|+.+|+.+|+.++
T Consensus 62 g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~-~~r~~~l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 62 GGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITK-DDTHYYIQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp CCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCT-TCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred eEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcC-CCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 4688998877644332 12 7899999998 77889999999999999999999876
No 52
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=97.90 E-value=2e-05 Score=58.67 Aligned_cols=53 Identities=13% Similarity=0.244 Sum_probs=44.9
Q ss_pred CcccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...|+|.+|.+....+ .++.|.|.+. ++..|.|+|++++|+..|+.+|+.+.+
T Consensus 41 ~g~i~L~~~~v~~~~~---~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~~ 93 (103)
T 3rcp_A 41 KGSIKMAVCEIKVHSA---DNTRMELIIP-GEQHFYMKAVNAAERQRWLVALGSSKA 93 (103)
T ss_dssp SCEEEGGGCEEECCTT---CSSEEEEEET-TTEEEEEECSSHHHHHHHHHHHHTTSC
T ss_pred ccEEEeeeeEEEEcCC---CCceEEEEeC-CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 4568898888876433 5889999987 789999999999999999999998753
No 53
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.89 E-value=1.1e-05 Score=74.82 Aligned_cols=54 Identities=19% Similarity=0.264 Sum_probs=47.2
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCC-eeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSN-TELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g-~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.+|.+..+.+ .+|+|+|+|.+. +| ..|+|||+++.||.+||.+|+.++.
T Consensus 321 ~~i~l~~~~v~~~~~-~~r~~~F~i~t~-~~~~~~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 321 LAMDIDNCSVMAVDC-EDRRYCFQITSF-DGKKSSILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp EEEECTTCEEEEECC-TTCSSEEEEECT-TSCBCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred ceEEccceEEEeccc-cCCCceEEEEeC-CCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 468999999876644 688999999998 66 8999999999999999999998763
No 54
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.89 E-value=2.4e-05 Score=61.48 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=42.3
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCC-----------------------eeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSN-----------------------TELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g-----------------------~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
-.|+|.+|.+.. .+..+++++|+|.+. +. ..|.|+|++++|+++||.+|+.++.
T Consensus 48 G~I~L~~~~v~~-~~~~~~~~~F~i~~~-~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 48 GTVLLNACEIIE-RPSKKDGFCFKLFHP-LEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp EEEECSSCEECC-CCTTTSSCEEEEECT-TCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCEEEE-CCCCCCCeEEEEEcC-CccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 468899988743 234466799999876 32 2399999999999999999999864
No 55
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=97.89 E-value=2.9e-05 Score=59.78 Aligned_cols=54 Identities=11% Similarity=0.247 Sum_probs=45.1
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCCC---------------------eeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSSN---------------------TELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~g---------------------~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.|+|.+|.+.... ..+++++|+|.+. ++ ..|+|+|++++|+.+|+.+|+.++..
T Consensus 47 ~i~L~~~~v~~~~-~~~~~~~f~i~~~-~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 47 IIPLENLSIREVL-DPRKPNCFELYNP-SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp EEECTTCEEEEEC-CSSCSSEEEEECS-SSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEECCceEEEEcc-CCCCCceEEEecC-CccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 5899999876543 4588999999987 43 48999999999999999999988754
No 56
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.77 E-value=4.1e-05 Score=58.73 Aligned_cols=54 Identities=17% Similarity=0.374 Sum_probs=45.0
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
..|+|.++.+... ..+++++|.|.+. +..|+|+|++++|+..|+.+|+.+....
T Consensus 53 g~I~L~~~~~~~~--~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 106 (119)
T 2dhk_A 53 DSIDLSSAVFDCK--ADAEEGIFEIKTP--SRVITLKAATKQAMLYWLQQLQMKRWEF 106 (119)
T ss_dssp EEEEGGGCEEEEC--TTGGGCEEEEECS--SCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCCCEEEec--CCCCCCEEEEEeC--CcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 3588888877653 4567899999986 7899999999999999999999877543
No 57
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.76 E-value=5.7e-05 Score=60.72 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=42.5
Q ss_pred cccccCCceeeecc-cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVAC-DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~-~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.++.+-... ...+++|+|.|.+. +..|+|+|++.+||.+|+.+|+.++.
T Consensus 59 g~I~L~~~~~~~~~~~~~~~~~~F~I~t~--~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 59 DKLDIVDLTCLTEQNSTEKNCAKFTLVLP--KEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp EECCCSSCCEEEECCCTTSCCCEEEEECS--SCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cEEECCCceEEeeccCCCCcCcEEEEEcC--CCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 46788887655322 22446799999987 57899999999999999999998763
No 58
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.73 E-value=3.7e-05 Score=59.07 Aligned_cols=54 Identities=19% Similarity=0.320 Sum_probs=43.6
Q ss_pred ccccCCceee-ec--ccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVE-VA--CDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~-~a--~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.|+|.++..- .. .+..+++|+|.|.+. +..|+|+|++++|+.+|+.+|+.++..
T Consensus 56 ~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 56 VIPLKEVHKVQECKQSDIMMRDNLFEIVTT--SRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp EEEGGGCCEEEECTTHHHHTCSSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEcccceEEeeccccccCCcCCEEEEEeC--CcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 5778877532 22 245688999999976 789999999999999999999998754
No 59
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=97.70 E-value=6.4e-05 Score=63.95 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=47.8
Q ss_pred CcccccCCceeeecc---cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEVAC---DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~---~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...|+|.++.+.... ...+|+|+|+|.+. ++..|+|+|+++.++..|+.+|+.++.
T Consensus 150 ~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~-~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 150 KGEFAIDGYDVRMNNTLRKDGKKDCCFEICAP-DKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp SEEEECTTCEEEECGGGCSSTTGGGEEEEECS-SSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCcEEEEcCCccccCCCCCEEEEEcC-CCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 346889999987653 35677899999998 789999999999999999999998764
No 60
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=97.70 E-value=7.8e-05 Score=58.03 Aligned_cols=57 Identities=21% Similarity=0.386 Sum_probs=43.7
Q ss_pred cccccCCce---eeecc-cCCcCCCeEEEEecC-C--------------C---eeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 6 ERIDIGHNC---VEVAC-DYTKRKHVLRLSSPS-S--------------N---TELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 6 ~~~~l~~~~---~~~a~-~~~krk~vf~l~~~~-~--------------g---~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
..|+|.+|. ++.+. +..+|+|+|+|.+.. + | ..|+|+|++++|+..|+.+|+.++..
T Consensus 51 g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 51 GRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 368899988 44443 346899999998720 1 1 36999999999999999999987643
No 61
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=8.7e-05 Score=56.38 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=42.0
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
..+++.+|.+... ..++++|+|.+. +..|+|+|++++|+.+|+.+|+.++..
T Consensus 51 ~~i~l~~~~v~~~---~~~~~~F~I~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~ 102 (114)
T 2da0_A 51 AKLNLLTCQVKPN---AEDKKSFDLISH--NRTYHFQAEDEQDYVAWISVLTNSKEE 102 (114)
T ss_dssp EEEETTTSEEEEC---SSSSSCEEEEET--TEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CEEEeeeeEEEEC---CCCCCEEEEEcC--CcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 3466777766632 347899999975 789999999999999999999987654
No 62
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.68 E-value=4.8e-05 Score=57.69 Aligned_cols=54 Identities=13% Similarity=0.187 Sum_probs=42.3
Q ss_pred cccccCCceeeecc-------cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVAC-------DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~-------~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|+|.++.+-... +..+++++|.|.+. +..|+|+|++++|+.+|+.+|+.++.
T Consensus 51 g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 51 GVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTT--RRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp CEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEES--SCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred eEEEccCcEEEeecCccccccccCCCCeEEEEECC--CceEEEECCCHHHHHHHHHHHHHHhc
Confidence 35778877654321 23567799999775 78999999999999999999998753
No 63
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=97.67 E-value=5.6e-05 Score=55.22 Aligned_cols=49 Identities=16% Similarity=0.278 Sum_probs=41.2
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTH 59 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~ 59 (294)
..++|.+|.+... ..+++.|.+.+. +..|.|+|+|++|+.+|+.+|+++
T Consensus 44 ~~i~l~~~~~~~~---~~~~~~F~i~~~--~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 44 GSICLSKAVITPH---DFDECRFDISVN--DSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp EEEETTTCEEEEC---SSCSSEEEEEET--TEEEEEECCSSCCTHHHHHHHHHH
T ss_pred eeEecceeeeecC---cccceeEEEEeC--CeEEEEECCCHHHHHHHHHHHHhh
Confidence 4578888776653 456899999986 789999999999999999999875
No 64
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.66 E-value=0.0001 Score=57.47 Aligned_cols=53 Identities=17% Similarity=0.347 Sum_probs=41.3
Q ss_pred cccccCC-ceeeecc--cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGH-NCVEVAC--DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~-~~~~~a~--~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
-.|+|.+ +.+..+. +..+++++|.+.+. ...|+|+|++++||.+||.+|+.++
T Consensus 64 G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~--~r~y~l~A~s~~e~~~Wi~al~~a~ 119 (126)
T 1v5p_A 64 GSLQLTYISKVSIATPKQKPKTPFCFVINAL--SQRYFLQANDQKDLKDWVEALNQAS 119 (126)
T ss_dssp EEEETTTCCEEEECCTTTSCSCSSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred EEEECCCccEEecCCcccCCCCCEEEEEECC--CEEEEEECCCHHHHHHHHHHHHHHH
Confidence 3567777 4555432 34577899988765 6789999999999999999999875
No 65
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=97.65 E-value=7.8e-05 Score=69.58 Aligned_cols=55 Identities=16% Similarity=0.306 Sum_probs=46.3
Q ss_pred CcccccCCceeeecccCCcCCCeEEEEecCCC-eeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 5 CERIDIGHNCVEVACDYTKRKHVLRLSSPSSN-TELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 5 ~~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g-~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
...++|.+|.+..+. ..+|+|+|.|.+. ++ ..|+|||+++.||.+||.+|++++.
T Consensus 343 ~~~~~l~~~~v~~~~-~~~r~~cF~i~~~-~~~~~~~l~A~s~~e~~~Wi~ai~~a~~ 398 (407)
T 4h8s_A 343 GLIQDLDNCSVMAVD-CEDRRYCFQITTP-NGKSGIILQAESRKENEEWICAINNISR 398 (407)
T ss_dssp CCCBCSSCCEEEEEC-CTTCSSEEEEECT-TSSCCEEEECSSSHHHHHHHHHHHHHHS
T ss_pred CeEEECCceEEEECC-CCCCCceEEEEec-CCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 346789999887654 4568899999998 54 6799999999999999999998764
No 66
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=97.60 E-value=6.5e-05 Score=57.90 Aligned_cols=55 Identities=13% Similarity=0.146 Sum_probs=41.2
Q ss_pred cccCCceee---ecccCCcCCCeEEEEec--CCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 8 IDIGHNCVE---VACDYTKRKHVLRLSSP--SSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 8 ~~l~~~~~~---~a~~~~krk~vf~l~~~--~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
|+|.++.+. +.....+++|+|+|.+. ..+..|+|+|++++|+.+|+.+|+.++..
T Consensus 52 i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 111 (125)
T 1unq_A 52 APLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG 111 (125)
T ss_dssp SCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 566655432 12234578999999963 14678999999999999999999987754
No 67
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.51 E-value=0.00028 Score=53.38 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=40.6
Q ss_pred cccccCCce-eeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhhcc
Q psy5716 6 ERIDIGHNC-VEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQS 64 (294)
Q Consensus 6 ~~~~l~~~~-~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~~ 64 (294)
..|+|.++. ++.. + +|+|.|.+. +..|+|+|++++|+.+|+.+|+.++...+
T Consensus 50 g~i~l~~~~~v~~~-~----~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 50 GIIPLSAISTVRVQ-G----DNKFEVVTT--QRTFVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp CEEETTTEEEEEEE-T----TTEEEEEES--SCCEEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred CEEECCcceEEEeC-C----CCEEEEEeC--CcEEEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 357777764 2222 1 799999965 78999999999999999999999875443
No 68
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=97.25 E-value=0.00044 Score=53.39 Aligned_cols=52 Identities=13% Similarity=0.295 Sum_probs=41.6
Q ss_pred cccCCceee-ecccCCcCCCeEEEEecCCCe-------eEEEecCChhHHHHHHHHHHHHH
Q psy5716 8 IDIGHNCVE-VACDYTKRKHVLRLSSPSSNT-------ELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 8 ~~l~~~~~~-~a~~~~krk~vf~l~~~~~g~-------e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
|.|.|..+. +.....+|||.|.|-.. +|. .|.|.|++.+||.+|+++|.++.
T Consensus 57 IpL~~~~vr~v~~~~~~rk~~F~l~~~-d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 57 LSVDNLKLRDVEKGFMSSKHIFALFNT-EQRNVYKDYRQLELACETQEEVDSWKASFLRAG 116 (125)
T ss_dssp EECTTEEEEECCSCSSSSCEEEEEEET-TSSCSSTTCSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred EECCCceEeccCCCCCCCceEEEEECC-CCccccccceEEEEeCCCHHHHHHHHHHHHhCc
Confidence 566666655 33444579999999998 665 89999999999999999997754
No 69
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.24 E-value=0.00038 Score=61.18 Aligned_cols=55 Identities=16% Similarity=0.249 Sum_probs=43.6
Q ss_pred CcccccCCce-eeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 5 CERIDIGHNC-VEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 5 ~~~~~l~~~~-~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.-.|+|.+|. +.... ..+++|+|.|.+. +..|+|+|++++|+.+|+.+|+.+...
T Consensus 58 ~g~I~L~~~~~V~~~~-~~~~~~~F~I~t~--~rty~l~A~se~e~~~Wi~aL~~~~~~ 113 (264)
T 1qqg_A 58 KRSIPLESCFNINKRA-DSKNKHLVALYTR--DEHFAIAADSEAEQDSWYQALLQLHNR 113 (264)
T ss_dssp SEEEEGGGEEEEEEEC-CSSCSSEEEEEES--SCEEEEECSSHHHHHHHHHHHHHHC--
T ss_pred ceEEEeeceEEEEecc-CCCCCcEEEEEEC--CEEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 3468888876 33332 3788999999987 689999999999999999999987644
No 70
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.22 E-value=0.00044 Score=63.20 Aligned_cols=54 Identities=11% Similarity=0.276 Sum_probs=45.1
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCC--------------------CeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSS--------------------NTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~--------------------g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.|+|.+|.+... +..+|+++|+|.+.++ +..|+|+|++++|+.+|+.+|+.++.
T Consensus 255 ~I~L~~~~v~~~-~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 255 IIPLENLSIREV-EDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp EEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEcCCeEEEEc-cCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 689999987654 4578999999998721 36899999999999999999998764
No 71
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.20 E-value=0.00047 Score=59.18 Aligned_cols=51 Identities=12% Similarity=0.224 Sum_probs=42.6
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.|+|.+|.+-. +..+++|+|+|.+. +..|+|+|++++|+.+|+.+|+.++.
T Consensus 105 ~I~L~~~~~v~--~~~~k~~~F~I~t~--~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 105 TVEVRSAKEII--DNTNKENGIDIIMA--DRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp EEEGGGCSEEE--EETTTTSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEcCCCEEec--cCCCCCcEEEEEcC--CcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 57888876532 34478999999875 78999999999999999999999874
No 72
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.19 E-value=0.00067 Score=53.23 Aligned_cols=54 Identities=19% Similarity=0.372 Sum_probs=44.5
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecC-CC-eeEEEecCChhHHHHHHHHHHHHH
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPS-SN-TELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~-~g-~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
.|+|+||.+....+..++|+.|++..++ +| .+|.|.++++.++.+|+++++.++
T Consensus 56 ~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 56 QLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp CBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhc
Confidence 4799999977665557888888887651 34 889999999999999999999875
No 73
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.19 E-value=0.00066 Score=55.16 Aligned_cols=53 Identities=15% Similarity=0.234 Sum_probs=41.7
Q ss_pred ccccCCcee-eeccc-----CCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 7 RIDIGHNCV-EVACD-----YTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 7 ~~~l~~~~~-~~a~~-----~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.|+|.++.. +...+ ..+++++|+|.+. +..|.|+|++++|+.+||.+|++++.
T Consensus 63 ~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~--~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 63 FIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHD--ANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp EEEGGGCCEEEECCCCSSSCCSSSCSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEeeeEEEEeccccccCcccccceeEEEecC--CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 577877643 23221 3467899999987 57899999999999999999999874
No 74
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.10 E-value=0.00071 Score=55.32 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=30.9
Q ss_pred CeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 26 HVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 26 ~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
|+|+|.+. + ..|+|+|++++|+.+||.+|+.++.
T Consensus 99 ~~F~I~t~-~-rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 99 YPFQVVYD-E-GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp EEEEEEET-T-CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccEEEEeC-C-ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 89999987 4 6799999999999999999999874
No 75
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.83 E-value=0.0013 Score=51.06 Aligned_cols=41 Identities=20% Similarity=0.409 Sum_probs=36.7
Q ss_pred cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 20 DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 20 ~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
+...+-|+|-|+.. ++.||+|.|.|+.+|+.|++.|+.-..
T Consensus 90 EmPD~~nTFVlK~~-n~~eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 90 EMPEKDNTFVLKVE-NGAEYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp SSCCCTTEECCBCT-TSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccCCccceEEEEec-CCcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence 44668999999999 899999999999999999999988653
No 76
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=96.36 E-value=0.011 Score=44.87 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=39.7
Q ss_pred cccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 8 IDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 8 ~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
++|.+..+.--.|-..-+|.|+|.+. ..+|+++|++..|..+|+.+|+.+..
T Consensus 56 ~~L~~~~v~d~~d~~~~~n~f~i~~~--~~s~~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 56 YPLDRLAVVNVKDNPPMKDMFKLLMF--PESRIFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp EETTTCEEEEECCBTTBSSEEEEEET--TEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEcccCEEEECCCCcccceEEEEEeC--CceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 45555444432333356999999986 57899999999999999999998753
No 77
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=96.31 E-value=0.0078 Score=46.00 Aligned_cols=39 Identities=21% Similarity=0.361 Sum_probs=32.2
Q ss_pred CcCCCeEEEEecC----CCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 22 TKRKHVLRLSSPS----SNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 22 ~krk~vf~l~~~~----~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
....+.|+|...+ .+..++|+|+|++|+..|+.+|+..+
T Consensus 72 ~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 72 KEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp TTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred ccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 3347899998741 35799999999999999999998765
No 78
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=96.26 E-value=0.0051 Score=56.93 Aligned_cols=37 Identities=14% Similarity=0.370 Sum_probs=33.3
Q ss_pred CCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 24 RKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 24 rk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
++++|+|.+. +..|.|+|+++.|+.+|+.+|+.+++.
T Consensus 337 ~~~~F~I~t~--~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 337 WPHGITIVTP--DRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp SCEEEEEECS--SCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 3799999987 589999999999999999999998753
No 79
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.24 E-value=0.0083 Score=46.91 Aligned_cols=55 Identities=9% Similarity=0.285 Sum_probs=47.0
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
-+.|+|..+....|-...+|.|.|... ....+++.|.+.+|++.|+.+|+..+..
T Consensus 73 klPL~g~~V~~~ed~~~~~~aFeI~g~-~~~~i~v~~~s~eE~~~Wl~~L~~~i~~ 127 (132)
T 1v61_A 73 KIPIAGMVVNRLDEIEGSDCMFEITGS-TVERIVVHCNNNQDFQEWMEQLNRLTKS 127 (132)
T ss_dssp EECTTTCBCSTTCSSSSSCCCEEEECS-SSCEEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred EEecceeEEEeccccccCccEEEEecC-CCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 356777777777666789999999988 7788999999999999999999987643
No 80
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=95.75 E-value=0.0097 Score=52.23 Aligned_cols=52 Identities=17% Similarity=0.284 Sum_probs=38.2
Q ss_pred cccCCceeeeccc-----CCcCCCeEEEEecCCC-----eeEEEecCChhHHHHHHHHHHHHH
Q psy5716 8 IDIGHNCVEVACD-----YTKRKHVLRLSSPSSN-----TELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 8 ~~l~~~~~~~a~~-----~~krk~vf~l~~~~~g-----~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
+++.++.+....+ ...++|+|.|.+. ++ ..|+|+|+|+.++..|+.+|+.+.
T Consensus 214 ~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~-~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 214 IQFENVNIYYGIQCKMKYKAPTDHCFVLKHP-QIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp EEGGGCEEEEECSHHHHHCCSSSCEEEEECT-TCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccceeEEEEecCccccccCCCCCeEEEEEcC-CCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 4455555554332 3457899999986 32 359999999999999999998653
No 81
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.27 E-value=0.03 Score=43.07 Aligned_cols=52 Identities=13% Similarity=0.164 Sum_probs=39.3
Q ss_pred cccccCCceeeecccCC----cCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVACDYT----KRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~----krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
..|.|..|..-...+-. |..++|.|.|. ...|+|.|++ .++.+|+.+|.+.+
T Consensus 65 rVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~--er~~~laAe~-~E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 65 KVIRLSDCLRVAEAGGEASSPRDTSAFFLETK--ERLYLLAAPA-AERGDWVQAICLLA 120 (127)
T ss_dssp EEECGGGEEEEEECCSCSSSCSSCEEEEEEES--SCEEEEEECH-HHHHHHHHHHHHHH
T ss_pred eEEEhhhCCeEecccCccCCCCcceEEEEEeC--CcEEEEEeCc-HHHHHHHHHHHHHh
Confidence 45677666554322222 67799999998 4789999996 59999999999875
No 82
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=94.87 E-value=0.017 Score=53.41 Aligned_cols=55 Identities=15% Similarity=0.250 Sum_probs=42.9
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecC--CCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPS--SNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~--~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
..|+|.++.+....+...++|.|+|.... .+..|.|+|+|..+|.+|+.+|+.+.
T Consensus 189 g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 189 AVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp EEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence 35778776666655556789999998311 35789999999999999999998764
No 83
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=94.86 E-value=0.091 Score=41.26 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=42.6
Q ss_pred ccccCCceeeec-ccCCcCCCeEEEEecCCC----eeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVA-CDYTKRKHVLRLSSPSSN----TELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a-~~~~krk~vf~l~~~~~g----~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.+.|.|..+... .+| =.|-|+|...++| ...+|+|.+..|+..|+.+|++++++
T Consensus 65 ~~~L~gm~V~~~e~e~--~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e 123 (140)
T 3qwm_A 65 SFSLYGMQVLLFENQY--YPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAE 123 (140)
T ss_dssp EECCTTEEEEEECCSS--CTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EeeecceEEEcccCCC--CceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 456777766643 233 4899999987557 66999999999999999999998765
No 84
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=94.08 E-value=0.091 Score=41.94 Aligned_cols=54 Identities=17% Similarity=0.302 Sum_probs=42.7
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecC-CC-eeEEEecCChhHHHHHHHHHHHHH
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPS-SN-TELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~-~g-~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
.|+|+||++...-.....|..++|...+ +| .|+.|.++++.+...|+++.+-++
T Consensus 73 ~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAs 128 (165)
T 4bbk_A 73 KLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILAS 128 (165)
T ss_dssp EEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhcc
Confidence 4699998877655667778778873331 34 599999999999999999998865
No 85
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=93.86 E-value=0.11 Score=46.99 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=44.0
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.++.|.+..+.-..|-..-+|.|+|... ++..|.|+|.+.++...|+.+|+.+..
T Consensus 295 ~~i~l~~~~v~~~~d~~~~~~~F~i~~~-~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 295 EKFFMRKVQINDKDDTNEYKHAFEIILK-DENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp EEEESCSCEEEECCCSSSCCSEEEECCT-TSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEeccceEEEeCCcccccCccEEEecC-CCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 4567777766654444456899999987 678999999999999999999998753
No 86
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=93.63 E-value=0.12 Score=42.28 Aligned_cols=53 Identities=15% Similarity=0.360 Sum_probs=41.2
Q ss_pred cccCCceeeeccc-CCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 8 IDIGHNCVEVACD-YTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 8 ~~l~~~~~~~a~~-~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
|.|.-|-+....- -.+|.|.|+|+..++-...+|++.|..+...|+++|+..+
T Consensus 123 IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 123 VSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp EETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 5566666664321 2248999999999444789999999999999999999875
No 87
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=92.91 E-value=0.18 Score=40.70 Aligned_cols=54 Identities=17% Similarity=0.319 Sum_probs=42.6
Q ss_pred ccccCCceeeecccCCcCCCeEEEEe--cCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSS--PSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~--~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
.|.|+||.+...-+....|..+++-. ..+-.||.+.++++.++..|+++.+-++
T Consensus 94 ~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAs 149 (173)
T 4f7h_A 94 QMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLAS 149 (173)
T ss_dssp EEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhhc
Confidence 36999999997766777776666644 3123789999999999999999998765
No 88
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=92.32 E-value=0.22 Score=43.38 Aligned_cols=52 Identities=15% Similarity=0.372 Sum_probs=39.6
Q ss_pred cccCCceeeecccC-CcCCCeEEEEecCCCee-EEEecCChhHHHHHHHHHHHHH
Q psy5716 8 IDIGHNCVEVACDY-TKRKHVLRLSSPSSNTE-LLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 8 ~~l~~~~~~~a~~~-~krk~vf~l~~~~~g~e-~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
+.|.-|-+....-. .+|.|.|.|... ||.. +.+++.|..++..|+.+|+.++
T Consensus 208 ipL~m~~~tR~~~~~d~~~~~fev~s~-dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 208 VSLKMAYVSRRCTPTDPEPRYLEICAA-DGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp EESSSEEEEEECCSSCSSSCEEEEEET-TTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcceeeeeeeccccCCCCceEEEECC-CCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 44555555543222 238899999999 7754 8999999999999999999875
No 89
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=92.08 E-value=0.31 Score=43.78 Aligned_cols=55 Identities=24% Similarity=0.317 Sum_probs=40.4
Q ss_pred cccccCCceeeecccC---------------CcCCCeEEEEec--CCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 6 ERIDIGHNCVEVACDY---------------TKRKHVLRLSSP--SSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~---------------~krk~vf~l~~~--~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
.+|.|.+..++-..|- ..-+|.|+|... ..+..|.|+|.+..+...|+.+|+.++
T Consensus 274 ~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 274 QPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp CCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 3566666666644332 134799999864 136789999999999999999998864
No 90
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=91.68 E-value=0.3 Score=45.00 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=40.6
Q ss_pred ccccCCceeeecccCC------cCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVACDYT------KRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~------krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
+|+|.+..+.-..|-. .-+|.|+|.....+..|+|+|.+..+...|+.+|+.+...
T Consensus 303 ~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~ 364 (402)
T 2dfk_A 303 RIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKM 364 (402)
T ss_dssp EEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 4566666555322211 2378999998734578999999999999999999986543
No 91
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=90.94 E-value=0.27 Score=45.64 Aligned_cols=52 Identities=15% Similarity=0.195 Sum_probs=36.0
Q ss_pred ccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 7 RIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.+.|.+..+....+ ...+|.|.+.+. +..|.|+|.+.++...|+.+|+.++.
T Consensus 286 ~i~L~~l~v~~~~~-~~~~~~f~i~~~--~~~~~l~a~s~~ek~~W~~~i~~ai~ 337 (434)
T 3mpx_A 286 TLAVANMKVSRPVM-EKVPYALKIETS--ESCLMLSASSCAERDEWYGCLSRALP 337 (434)
T ss_dssp EEEC-----CCCCC-TTSCSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHC--
T ss_pred EEEcCCcEEEecCC-CCCCeeEEEecC--CeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 45666666643222 357899999876 56899999999999999999999764
No 92
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=90.67 E-value=0.49 Score=44.32 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=41.6
Q ss_pred ccccCCceeeecccCC------cCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVACDYT------KRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~~~~------krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
+|.|.+..+.-..+-. .-+|.|+|.....+..|+|+|.+..+...|+.+|+.+...
T Consensus 380 ~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 380 RLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQ 441 (466)
T ss_dssp EEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 5667676665322211 2378999998734678999999999999999999987643
No 93
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=88.73 E-value=0.45 Score=41.25 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=40.1
Q ss_pred cccCCceeeecccCCcC-----CCeEEEEecCC----CeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 8 IDIGHNCVEVACDYTKR-----KHVLRLSSPSS----NTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 8 ~~l~~~~~~~a~~~~kr-----k~vf~l~~~~~----g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
++|.+..+-.+.+..|+ ++.|.|+.... ...|.|.|+|+.++..|+.+|+.+.
T Consensus 178 ~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 178 ADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp ECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 47777777766655442 68999996511 1259999999999999999998764
No 94
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=88.20 E-value=0.67 Score=48.19 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=43.6
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
.++.|.+..+.-..+-..-+|.|++... +|..|+|+|.+.++...|+.+|+....
T Consensus 492 ~~i~L~~l~V~~~~d~~~~~~~F~I~~~-~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 492 EKFFMRKVQINDKDDTNEYKHAFEIILK-DENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp CEECCSSCCCCCCCCSSSCCSEEEECCT-TSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCceEEEECCCCccccceEEEEcC-CCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 3556666666544455567899999988 778999999999999999999987653
No 95
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=87.63 E-value=0.55 Score=41.24 Aligned_cols=53 Identities=25% Similarity=0.395 Sum_probs=40.0
Q ss_pred cccCCceeeecccCCc-----CCCeEEEEecC----CCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 8 IDIGHNCVEVACDYTK-----RKHVLRLSSPS----SNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 8 ~~l~~~~~~~a~~~~k-----rk~vf~l~~~~----~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
++|.++.+....++.| +++.|-|+... +...|+|.|+|+.++..|+.+|+.+.
T Consensus 204 ~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 204 LQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp ECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 3677777776554433 38899999641 23469999999999999999998754
No 96
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=87.60 E-value=0.89 Score=41.71 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=39.9
Q ss_pred ccccCCceeeecc----cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVAC----DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~----~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
+|.|.+..+.-.. +..+-+|.|.|....++..|.|+|.+.++...|+.+|+.++..
T Consensus 277 ~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 336 (406)
T 2vrw_B 277 SVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISN 336 (406)
T ss_dssp EEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 4556665554221 1234579999987534568999999999999999999987754
No 97
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=87.00 E-value=1.2 Score=40.02 Aligned_cols=39 Identities=10% Similarity=0.203 Sum_probs=32.7
Q ss_pred CCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 24 RKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 24 rk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
-++.|.|........|.|+|.+.++...|+.+|+.++..
T Consensus 288 ~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 326 (353)
T 1kz7_A 288 DTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTS 326 (353)
T ss_dssp BTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 378899987633578999999999999999999987644
No 98
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=86.34 E-value=0.14 Score=48.53 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=0.0
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.+|.|.+..+....|-...+|.|++... ...|.|||.+..+...|+..|++++..
T Consensus 309 ~~i~l~~~~v~~~~d~~~~~~~F~i~~~--~~~~~l~a~s~~ek~~W~~~i~~ai~~ 363 (510)
T 3jzy_A 309 TPIFLNEVLVKLPTDPSSDEPVFHISHI--DRVYTLRTDNINERTAWVQKIKAASEQ 363 (510)
T ss_dssp ---------------------------------------------------------
T ss_pred CceehhheEEeccCCCCccccceeeecc--ceeEEeccCCHHHHHHHHHHHHHHHHH
Confidence 4567777777766555667899999887 468999999999999999999987654
No 99
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=86.14 E-value=0.8 Score=42.30 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=34.8
Q ss_pred ccCCcCCCeEEEEecCCCeeE---EEecCChhHHHHHHHHHHHHHh
Q psy5716 19 CDYTKRKHVLRLSSPSSNTEL---LLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 19 ~~~~krk~vf~l~~~~~g~e~---l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
....+|+|.|.+.+. ++..+ .|++++.+++.+|+.+|+.++.
T Consensus 64 ~~~~~~~~~f~I~~~-~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 64 KTERPRPNTFIIRCL-QWTTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp EECSSSTTEEEEEEE-ETTEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCceeEEEcC-CCceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 345678999999987 65555 7999999999999999998753
No 100
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=85.78 E-value=1.6 Score=35.74 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=39.1
Q ss_pred cccccCCceee-ecccCCcCCCeEEEEecC-CCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVE-VACDYTKRKHVLRLSSPS-SNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~-~a~~~~krk~vf~l~~~~-~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
+.|.|.++.+. +|.| .+..|-+.+.. +..-|-|+|.+..+...|+.+|+.++...
T Consensus 118 pvi~L~~~~vre~a~d---~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~ 174 (185)
T 2lg1_A 118 TVISLKKLIVREVAHE---EKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTL 174 (185)
T ss_dssp SEEESSSCEEECCSSC---SSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CeEeecceEEeccCCC---CCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhC
Confidence 56788888886 4543 33444444321 24579999999999999999999877543
No 101
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=85.71 E-value=1.4 Score=38.82 Aligned_cols=38 Identities=16% Similarity=0.294 Sum_probs=31.2
Q ss_pred CCCeEEEEec---CCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 24 RKHVLRLSSP---SSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 24 rk~vf~l~~~---~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
-++.|.+... +.+..|+|+|.+..+...|+.+|+.++.
T Consensus 268 ~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~ 308 (311)
T 1nty_A 268 DPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQ 308 (311)
T ss_dssp CTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHh
Confidence 3678999872 1356799999999999999999998764
No 102
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=84.21 E-value=2 Score=38.71 Aligned_cols=53 Identities=11% Similarity=0.104 Sum_probs=37.0
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecCC---CeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPSS---NTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~~---g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
..|.|.+..+.-. ..-++.|.+...++ ...|.|+|.+..+...|+..|+.++.
T Consensus 311 ~~i~l~~~~v~~~---~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 311 PVLKLNAVLIRSV---ATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp SEEEGGGEEEEEC---SSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEccceeeecc---cCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 4566666655421 12256777765411 26899999999999999999998763
No 103
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=83.63 E-value=1.2 Score=39.99 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=31.7
Q ss_pred CCCeEEEEecC---CCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 24 RKHVLRLSSPS---SNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 24 rk~vf~l~~~~---~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
-++.|.|...+ ....|.|+|.+..+...|+.+|+.+...
T Consensus 278 ~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 278 DPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp CTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 36889998741 1378999999999999999999987643
No 104
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=82.72 E-value=1.8 Score=34.27 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=30.8
Q ss_pred cCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 23 KRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 23 krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
|..+.|.|.+. +..|.|.+. ..+.++|+++|+++..
T Consensus 104 k~~~~F~I~Tp--~RtY~~~d~-~~~AqeWv~aI~~~~~ 139 (151)
T 1w1g_A 104 KNFKTFFVHTP--NRTYYLMDP-SGNAHKWCRKIQEVWR 139 (151)
T ss_dssp SSSSEEEEEET--TEEEEEECT-TSCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC--CceEEEEcC-ccCHHHHHHHHHHHHH
Confidence 33559999998 599999997 8899999999998764
No 105
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=82.39 E-value=2.4 Score=38.82 Aligned_cols=55 Identities=11% Similarity=0.085 Sum_probs=38.8
Q ss_pred cccccCCceeeecccCCcCCCeEEEEecC-CC--eeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVEVACDYTKRKHVLRLSSPS-SN--TELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~~a~~~~krk~vf~l~~~~-~g--~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
.+|.|.+..+.- ...-++.|.+.... .| ..|.|+|.+.++...|++.|+.+++..
T Consensus 353 ~~i~l~~~~v~~---~~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 353 PVLKLNAVLIRS---VATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp SEEEGGGEEEEE---CSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred Cceechhceecc---ccccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 456676666651 22334567776641 12 689999999999999999999987543
No 106
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=81.93 E-value=2.8 Score=37.82 Aligned_cols=56 Identities=7% Similarity=0.016 Sum_probs=36.5
Q ss_pred ccccCCceeeeccc-CCcCCCeEEEEecC------CCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVACD-YTKRKHVLRLSSPS------SNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~~-~~krk~vf~l~~~~------~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.+.|.+..+.-..+ -......|.+.... ....|.|+|.+.++...|+.+|+.++..
T Consensus 305 ~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~ 367 (377)
T 1foe_A 305 MIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRD 367 (377)
T ss_dssp EEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhH
Confidence 35666665543222 22233467775210 2467999999999999999999987643
No 107
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=80.82 E-value=1.9 Score=39.14 Aligned_cols=55 Identities=18% Similarity=0.139 Sum_probs=38.7
Q ss_pred cccccCCceeee-cccCCcCCCeEEEEecC-CCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVEV-ACDYTKRKHVLRLSSPS-SNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~~-a~~~~krk~vf~l~~~~-~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
..+.|.++.+.- +.| .++.|.+.... +...|.|+|.+..+...|+.+|+.++...
T Consensus 315 ~~i~l~~~~v~~~~~d---~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~ 371 (385)
T 1txd_A 315 PVIKLSTVLVRQVATD---NKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASV 371 (385)
T ss_dssp SEEEGGGEEEEECCC----CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CceecccccccccccC---CceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 456676666553 222 35677776541 24679999999999999999999877543
No 108
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=80.41 E-value=2.1 Score=41.30 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=39.5
Q ss_pred ccccCCceeeecc----cCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHHhh
Q psy5716 7 RIDIGHNCVEVAC----DYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIA 62 (294)
Q Consensus 7 ~~~l~~~~~~~a~----~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~~~ 62 (294)
.+.|.+..+.-.. +-.+-+|.|+|....+...|.|+|.+..+...|+.+|+.++..
T Consensus 449 ~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~ 508 (587)
T 3ky9_A 449 FVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISN 508 (587)
T ss_dssp EEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhh
Confidence 4556666665322 2234578999999833378999999999999999999988754
No 109
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=79.41 E-value=2.1 Score=38.56 Aligned_cols=54 Identities=15% Similarity=0.066 Sum_probs=37.3
Q ss_pred ccccCCceeee-cccCCcCCCeEEEEec-CCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 7 RIDIGHNCVEV-ACDYTKRKHVLRLSSP-SSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 7 ~~~l~~~~~~~-a~~~~krk~vf~l~~~-~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
.+.|.+..+.- +.+ .++.|-+... .+...|.|+|.+.++...|++.|+.++...
T Consensus 318 ~i~l~~~~v~e~~~~---~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 318 VLRLTSAMTREVATD---HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp EEEGGGEEEEECTTC---TTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred eEechhhhccccccc---cceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 46777766553 322 2345555542 144679999999999999999999987543
No 110
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=78.31 E-value=2.6 Score=40.25 Aligned_cols=54 Identities=11% Similarity=0.061 Sum_probs=37.3
Q ss_pred cccccCCceeee-cccCCcCCCeEEEEec--CCCeeEEEecCChhHHHHHHHHHHHHHhhc
Q psy5716 6 ERIDIGHNCVEV-ACDYTKRKHVLRLSSP--SSNTELLLQADDTLTMAHWIRDLQTHAIAQ 63 (294)
Q Consensus 6 ~~~~l~~~~~~~-a~~~~krk~vf~l~~~--~~g~e~l~qa~~~~~~~~W~~~i~~~~~~~ 63 (294)
+.|.|.+..+.- +.+ .+.|.+... .++..|.|+|.+..|...|++.|+.++...
T Consensus 470 ~~i~L~~l~v~e~~~d----~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~ 526 (536)
T 3odw_A 470 PVLRLTSAMTREVATD----HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 526 (536)
T ss_dssp SEEEGGGEEEEECTTC----TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTS
T ss_pred ceeecccceeeccccc----CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 357777776653 322 223444332 245789999999999999999999987654
No 111
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=72.15 E-value=1.6 Score=36.78 Aligned_cols=23 Identities=39% Similarity=0.484 Sum_probs=19.8
Q ss_pred eeEEEecCChhHHHHHHHHHHHH
Q psy5716 37 TELLLQADDTLTMAHWIRDLQTH 59 (294)
Q Consensus 37 ~e~l~qa~~~~~~~~W~~~i~~~ 59 (294)
..|.|+|++..||.+|+.+||++
T Consensus 205 r~~~~~a~s~~e~~~Wi~~lq~~ 227 (228)
T 3tfm_A 205 RVLHCNADTPEEMHHWITLLQRS 227 (228)
T ss_dssp EEEEEECSSHHHHHHHHHHHCSC
T ss_pred ceEEEEcCCHHHHHHHHHHHhhc
Confidence 34669999999999999999863
No 112
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.70 E-value=9.9 Score=29.08 Aligned_cols=36 Identities=6% Similarity=0.255 Sum_probs=29.8
Q ss_pred CCCeEEEEecCCCeeEEEecCC---------------hhHHHHHHHHHHHHHh
Q psy5716 24 RKHVLRLSSPSSNTELLLQADD---------------TLTMAHWIRDLQTHAI 61 (294)
Q Consensus 24 rk~vf~l~~~~~g~e~l~qa~~---------------~~~~~~W~~~i~~~~~ 61 (294)
..|.|.+.|. +..|..++.. .+.+..|..+|+.+..
T Consensus 73 ~phcFEi~T~--~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 73 NPHCFEIITD--TMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp CCCSEEEECS--SCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEC--CEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 4599999986 7889998742 6899999999998764
No 113
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=59.33 E-value=13 Score=36.71 Aligned_cols=41 Identities=20% Similarity=0.378 Sum_probs=36.6
Q ss_pred ccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 19 CDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 19 ~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
..+.+..++|++.+. +|..|.++++|+.++.+|...|+++-
T Consensus 611 k~~i~~~~~l~~~~k-~~k~f~~~t~~~~~~~~W~~~i~~~~ 651 (689)
T 3v5w_A 611 ETQIKERKCLLLKIR-GGKQFILQCDSDPELVQWKKELRDAY 651 (689)
T ss_dssp EEESSSCEEEEEEET-TTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcCCCCcceeeeec-CCcEEEEECCChHHHHHHHHHHHHHH
Confidence 345678899999999 99999999999999999999999754
No 114
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=49.57 E-value=11 Score=28.57 Aligned_cols=35 Identities=9% Similarity=0.239 Sum_probs=28.5
Q ss_pred CCCeEEEEecCCCeeEEEecC-----------ChhHHHHHHHHHHHHH
Q psy5716 24 RKHVLRLSSPSSNTELLLQAD-----------DTLTMAHWIRDLQTHA 60 (294)
Q Consensus 24 rk~vf~l~~~~~g~e~l~qa~-----------~~~~~~~W~~~i~~~~ 60 (294)
+.|.|.+.|. +..|..++. ..+.+..|..+|+.+.
T Consensus 73 ~~hcFEi~T~--~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 73 NPHCFEIVTA--NATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp CCEEEEEECS--SCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred CCceEEEEeC--CeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 6799999996 788888873 1357999999999865
No 115
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=39.83 E-value=38 Score=28.35 Aligned_cols=52 Identities=19% Similarity=0.269 Sum_probs=41.8
Q ss_pred ccccCC-ceeeecccCCcCCCeEEEEecCCCeeEEEecCChhHHHHHHHHHHHHH
Q psy5716 7 RIDIGH-NCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHA 60 (294)
Q Consensus 7 ~~~l~~-~~~~~a~~~~krk~vf~l~~~~~g~e~l~qa~~~~~~~~W~~~i~~~~ 60 (294)
++.|.+ +.+|...++.|+.|++-|-+. + ..++|..++.++|..|-..|+...
T Consensus 60 slsL~~~~GlE~g~~ldk~s~TlAIIc~-d-~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 60 SLTLEDICGLEPALPYEGLAHTLAIICL-S-QAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp EEEECCEEEEEEEEEETTEEEEEEEEES-S-CEEEEECSSHHHHHHHHHHHHHHT
T ss_pred eeehHHhcCccccccccCcccEEEEEec-C-cEEEEEeCCHHHHHHHHHHHhhcc
Confidence 345544 345666789999999999998 5 456999999999999999998754
No 116
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=39.31 E-value=16 Score=25.30 Aligned_cols=47 Identities=21% Similarity=0.240 Sum_probs=34.1
Q ss_pred cCCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 152 CPFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 152 ~p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
++.|-|.++|... +..+.+.++-. ++ + .+..+++|++-..|..+|+.
T Consensus 6 ~~dg~~~v~G~~~-l~dl~~~l~~~----l~--~---~~~~Tl~G~i~~~lg~iP~~ 52 (83)
T 3llb_A 6 LPSGDFIVKALTP-VDAFNDFFGSE----FS--D---EEFDTVGGLVMSAFGHLPKR 52 (83)
T ss_dssp CTTSCEEEETTCB-HHHHHHHHCCC----CC--T---TTCSBHHHHHHHHHSSCCCT
T ss_pred eCCCEEEEEccCC-HHHHHHHhCCC----CC--C---CCCcCHHHHHHHHhCcCCCC
Confidence 3448899999765 67777776532 21 1 45669999999999999964
No 117
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=39.24 E-value=18 Score=25.23 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=31.9
Q ss_pred CceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCC
Q psy5716 154 FLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPD 207 (294)
Q Consensus 154 ~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~ 207 (294)
.|-|.++|... +..+.+.++-. ++ + .+..+++|++-.-|..+|+
T Consensus 7 dg~~~v~G~~~-l~dl~~~l~~~----l~--~---~~~dTl~G~v~~~lg~iP~ 50 (87)
T 2rk5_A 7 DNTYIVLGTMT-LNDFNEYFETD----LE--S---DNVDTIAGFYLTGVGTIPS 50 (87)
T ss_dssp TTEEEEETTSB-HHHHHHHHTCC----CC--C---TTCCBHHHHHHHHHCSCCC
T ss_pred CCEEEEEccCC-HHHHHHHhCCC----CC--C---CCcccHHHHHHHHhCcCCC
Confidence 37799999654 66777776542 21 1 3567999999999999986
No 118
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=39.14 E-value=18 Score=25.49 Aligned_cols=46 Identities=20% Similarity=0.246 Sum_probs=33.2
Q ss_pred CCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 153 PFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 153 p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
+.|-|.++|... +..+.+.++-. +. + .+..+++|++-..|..+|..
T Consensus 14 ~dg~~~v~G~~~-l~dl~~~l~~~----l~--~---~~~~TlgG~i~~~lg~iP~~ 59 (93)
T 2r2z_A 14 ADNEYLVQGRML-IDEFNEVFETD----LH--M---SDVDTMAGYLITALGTIPDE 59 (93)
T ss_dssp ETTEEEEETTSB-HHHHHHHHTCC----CC--C---TTCCBHHHHHHHHHSSCCCT
T ss_pred CCCEEEEECCCC-HHHHHHHhCCC----CC--C---CCcccHHHHHHHHhCCCCCC
Confidence 348899999655 66777776542 21 1 35679999999999999863
No 119
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=38.94 E-value=18 Score=26.31 Aligned_cols=46 Identities=20% Similarity=0.188 Sum_probs=33.4
Q ss_pred CCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 153 PFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 153 p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
..|-|++.|... +..+.+.|+-. + .+ .+..+++|++-..|..+|..
T Consensus 10 ~dg~~~v~G~~~-l~dl~~~lg~~----l--~~---e~~dTlgGli~~~lg~iP~~ 55 (101)
T 2p3h_A 10 SPDKWLIDGDTP-LDEVERAIGYE----L--PE---GDYETISGLLFDHANALLKT 55 (101)
T ss_dssp ETTEEEEETTCB-HHHHHHHHTSC----C--CC---SSCCBHHHHHHHHHCSCCCT
T ss_pred CCCEEEEEccCC-HHHHHHHhCCC----C--CC---CCCccHHHHHHHHhCCCCCC
Confidence 348899999655 66777776542 2 11 36679999999999999964
No 120
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=38.04 E-value=18 Score=25.50 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=33.2
Q ss_pred CCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 153 PFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 153 p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
+.|-|.++|... +..+.+.++-. ++ + .+..+++|++-..|..+|..
T Consensus 16 ~dg~~~v~G~~~-l~dl~~~l~~~----l~--~---~~~dTlgG~i~~~lg~iP~~ 61 (91)
T 2pli_A 16 SSERWRIHAATE-IEDINTFFGTE----YS--S---EEADTIGGLVIQELGHLPVR 61 (91)
T ss_dssp ETTEEEEETTCB-HHHHHHHHCCC----CC--C---SSCCBHHHHHHHHHSSCCCT
T ss_pred CCCEEEEEcCCC-HHHHHHHhCCC----CC--C---CCCccHHHHHHHHhCCCCCC
Confidence 348899999655 66777766542 21 1 35679999999999999963
No 121
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=33.59 E-value=16 Score=25.10 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=33.7
Q ss_pred cCCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 152 CPFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 152 ~p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
++.|-|.++|... +..+.+.++-. ++ + .+..+++|++-..|..+|+.
T Consensus 6 ~~dg~~~v~g~~~-l~dl~~~l~~~----l~--~---~~~~Tl~G~i~~~lg~iP~~ 52 (81)
T 3lae_A 6 QSDGSMIIDGSAN-LRDLNKMFNWE----LD--T---EDARTFNGLILEHLEEIPDE 52 (81)
T ss_dssp CTTSCEEEETTCB-HHHHHHHHCCC----CC--C---SSCSBHHHHHHHHCSSCCCT
T ss_pred eCCCEEEEEeeCC-HHHHHHHhCCC----CC--C---CCCccHHHHHHHHhCCCCCC
Confidence 3448899999765 67777776542 21 1 45679999999999998853
No 122
>3iwf_A Transcription regulator RPIR family; transcriptional, N-terminal, PSI, MCSG, structural genomics, midwest center structural genomics; 1.40A {Staphylococcus epidermidis}
Probab=33.54 E-value=33 Score=25.02 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=31.2
Q ss_pred HHHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchhH
Q psy5716 231 MATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAI 275 (294)
Q Consensus 231 ~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLAi 275 (294)
+..++.....|++..+.+..|++.+...|.. |++..||-
T Consensus 5 ~~~I~~~~~~lt~~e~~ia~yil~~~~~~~~------~si~elA~ 43 (107)
T 3iwf_A 5 LYKIDNQYPYFTKNEKKIAQFILNYPHKVVN------MTSQEIAN 43 (107)
T ss_dssp HHHHHHHGGGSCHHHHHHHHHHHHCHHHHTT------CCHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhCHHHHHH------CCHHHHHH
Confidence 4567777889999999999999999988765 56666653
No 123
>2o3f_A Putative HTH-type transcriptional regulator YBBH; APC85504, putative transcriptional regulator YBBH; HET: MLY; 1.75A {Bacillus subtilis} SCOP: a.4.1.20
Probab=33.15 E-value=41 Score=24.57 Aligned_cols=37 Identities=24% Similarity=0.485 Sum_probs=29.5
Q ss_pred HHHHHHHhhCChhHHHHHHHHHHHHHHHHhcccccCCCccchh
Q psy5716 232 ATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLA 274 (294)
Q Consensus 232 ~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLA 274 (294)
..++.....|++..+.+..|++.|...|.. |++..||
T Consensus 10 ~~i~~~~~~ls~~e~~ia~yil~~~~~~~~------~si~elA 46 (111)
T 2o3f_A 10 AIIQSMXHXLPPSERKLADYILAHPHXAIE------STVNEIS 46 (111)
T ss_dssp HHHHHHGGGSCHHHHHHHHHHHHCHHHHHT------CCHHHHH
T ss_pred HHHHHHhccCCHHHHHHHHHHHHChHHHHh------cCHHHHH
Confidence 456667789999999999999999988766 5555555
No 124
>1rp3_B Anti sigma factor FLGM; transcription; 2.30A {Aquifex aeolicus} SCOP: a.137.11.1 PDB: 1sc5_B
Probab=28.45 E-value=86 Score=21.91 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHh
Q psy5716 162 NTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFR 203 (294)
Q Consensus 162 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLr 203 (294)
+..+|.+|++.+..|... .|...||.-|-.||+
T Consensus 56 r~~kV~~iK~aI~~GtY~---------vd~~~iA~kml~~~~ 88 (88)
T 1rp3_B 56 LEKKVKELKEKIEKGEYE---------VSDEKVVKGLIEFFT 88 (88)
T ss_dssp HHHHHHHHHHHHHTTCCC---------CCHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCCC---------CCHHHHHHHHHHHhC
Confidence 557999999999998754 577788887777664
No 125
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=26.95 E-value=19 Score=26.99 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=26.0
Q ss_pred eEEEEecCCCeeEEE--ecCChh-HHHHHHHHHHHH
Q psy5716 27 VLRLSSPSSNTELLL--QADDTL-TMAHWIRDLQTH 59 (294)
Q Consensus 27 vf~l~~~~~g~e~l~--qa~~~~-~~~~W~~~i~~~ 59 (294)
-|.+........|++ ||.+.+ ..+.|+..|+..
T Consensus 75 kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~ 110 (119)
T 1fho_A 75 VLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEE 110 (119)
T ss_dssp EEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTC
T ss_pred EEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHH
Confidence 477776622466788 999999 999999999873
No 126
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=25.83 E-value=47 Score=22.85 Aligned_cols=50 Identities=16% Similarity=0.129 Sum_probs=33.0
Q ss_pred CCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 153 PFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 153 p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
+.|-|.++|... +..+.+.++-.. +.+....+..+++|++-..|..+|+.
T Consensus 7 ~dg~~~v~G~~~-l~dl~~~l~~~~-----l~~~~~~~~~Tl~G~i~~~lg~iP~~ 56 (86)
T 2pls_A 7 EDGSWLLDGLIA-VPELKDTLGLRA-----VPEEEKGVYHTLSGMIMWLLGRLPQT 56 (86)
T ss_dssp TTSCEEEETTCB-HHHHHHHHTCSC-----CTTTTSCSCCBHHHHHHHHHTSCCCT
T ss_pred CCCeEEEEcccC-HHHHHHHhCCCc-----CCCccCCCcccHHHHHHHHhCCCCCC
Confidence 347899999654 667777765420 11100025679999999999999963
No 127
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=23.86 E-value=36 Score=24.06 Aligned_cols=50 Identities=14% Similarity=0.214 Sum_probs=32.7
Q ss_pred cCCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 152 CPFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 152 ~p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
++.|-|.++|... +..+.+.|.-. +... ...+..+++|++-..|..+|..
T Consensus 15 ~~dg~~~v~G~~~-l~dl~~~l~~~----l~~~--~~~~~dTlgG~i~~~lg~iP~~ 64 (94)
T 2oai_A 15 REDGSFLIDGTLP-IEELREVLGAE----LPDG--EENNYHTLAGMCISYFGRIPHV 64 (94)
T ss_dssp CTTSCEEEETTCB-HHHHHHHHTC-------------CCCSBHHHHHHHHHSSCCCT
T ss_pred eCCCeEEEeccCC-HHHHHHHhCCC----CCcc--cCCCCccHHHHHHHHhCCCCCC
Confidence 3448899999655 66777776542 2110 0025679999999999999964
No 128
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=21.20 E-value=64 Score=22.17 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=32.5
Q ss_pred CCceeecCCCHHHHHHHHHHHhcCCCcCccCCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 153 PFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 153 p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
+.|-|.++|... +..+.+.++-. .++ + ..+..+++|++-..|..+|+.
T Consensus 7 ~dg~~~v~G~~~-l~dl~~~l~~~---~l~--~--~~~~~Tl~G~i~~~lg~iP~~ 54 (86)
T 2p4p_A 7 NEDSWLIDGATP-LEDVMRALNIH---TFP--R--DENYETIGGFMMYMLRXIPXX 54 (86)
T ss_dssp CCSEEEEETTSB-HHHHHHHTTCC---CSC--C--SCSSCBHHHHHHHHHCSCCCT
T ss_pred CCCEEEEEccCC-HHHHHHHhCCC---CCC--c--CCCCccHHHHHHHHhCCCCCC
Confidence 348899999654 56666665431 011 1 135679999999999999964
No 129
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=21.07 E-value=22 Score=24.98 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=29.7
Q ss_pred CCceeecCCCHHHHHHHHHHHhcCCCcCcc-CCCCCCcchHHHHHHHHHHHhhCCCC
Q psy5716 153 PFLFPRVPGNTAAVSSLTEAVNKGLDASVL-EQDPRWSDVNVISSLLKSFFRRLPDS 208 (294)
Q Consensus 153 p~GIfR~~g~~~~i~~l~~~~~~~~~~~~~-~~~~~~~dv~~va~lLK~fLreLP~p 208 (294)
+.|-|.++|... +..+.+.++- . +. ...+..+++|++-..|..+|..
T Consensus 15 ~dg~~~v~G~~~-l~dl~~~l~~------~~l~--~~~~~~Tl~G~i~~~lg~iP~~ 62 (92)
T 2o3g_A 15 PDESLTVEGALE-YVELAPQLNL------PQQE--EDADFHTVAGLIMEELQTIPDV 62 (92)
T ss_dssp --CCSEEETTCB-HHHHTTTTTC------CCCC--TTCSCSBHHHHHHHHHTSCCCT
T ss_pred CCCEEEEEccCC-HHHHHHHhCC------CCCC--cCCCcccHHHHHHHHhCCCCCC
Confidence 348899999654 4444433322 2 21 0146779999999999999963
No 130
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=20.60 E-value=1.5e+02 Score=21.90 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=30.2
Q ss_pred CCCeEEEEecCCC-eeEEEecCChhHHHHHHHHHHHHHh
Q psy5716 24 RKHVLRLSSPSSN-TELLLQADDTLTMAHWIRDLQTHAI 61 (294)
Q Consensus 24 rk~vf~l~~~~~g-~e~l~qa~~~~~~~~W~~~i~~~~~ 61 (294)
....|.|-.. ++ ...-|-|+|+++...|+..|+....
T Consensus 84 ~~~~FsIiy~-~~~k~LdlvA~s~~e~~~Wv~gL~~L~~ 121 (131)
T 1mai_A 84 EDRCFSIVFK-DQRNTLDLIAPSPADAQHWVQGLRKIIH 121 (131)
T ss_dssp GGGEEEEEES-SSCCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccceEEEEEC-CCCceEEEEeCCHHHHHHHHHHHHHHHH
Confidence 4668999887 43 4667889999999999999998763
Done!