Query psy5718
Match_columns 720
No_of_seqs 366 out of 2010
Neff 6.1
Searched_HMMs 29240
Date Sat Aug 17 00:51:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5718.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5718hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y65_A Kinesin, kinesin heavy 100.0 1.3E-65 4.6E-70 558.4 10.5 272 9-280 5-343 (365)
2 1bg2_A Kinesin; motor protein, 100.0 2.6E-63 9E-68 533.3 11.1 259 9-270 1-325 (325)
3 1goj_A Kinesin, kinesin heavy 100.0 1.7E-62 5.8E-67 532.6 15.4 263 14-279 5-339 (355)
4 3cob_A Kinesin heavy chain-lik 100.0 1.2E-62 4.2E-67 535.6 12.8 276 14-301 4-350 (369)
5 2vvg_A Kinesin-2; motor protei 100.0 2.7E-62 9.4E-67 529.7 13.0 267 14-280 3-345 (350)
6 3b6u_A Kinesin-like protein KI 100.0 6E-62 2.1E-66 530.3 9.7 272 9-281 15-364 (372)
7 3bfn_A Kinesin-like protein KI 100.0 2.7E-61 9.1E-66 527.0 11.9 271 11-282 17-359 (388)
8 1x88_A Kinesin-like protein KI 100.0 1.7E-61 5.7E-66 525.8 10.3 268 11-278 4-358 (359)
9 1t5c_A CENP-E protein, centrom 100.0 4.7E-61 1.6E-65 520.2 11.4 264 13-281 2-339 (349)
10 2wbe_C Bipolar kinesin KRP-130 100.0 4.9E-61 1.7E-65 524.3 9.9 267 10-279 18-370 (373)
11 3lre_A Kinesin-like protein KI 100.0 5.3E-60 1.8E-64 513.3 13.8 256 12-270 7-355 (355)
12 2owm_A Nckin3-434, related to 100.0 5.1E-60 1.8E-64 525.9 12.6 265 12-278 35-421 (443)
13 2h58_A Kinesin-like protein KI 100.0 1.3E-59 4.5E-64 505.6 14.8 258 13-272 2-330 (330)
14 4a14_A Kinesin, kinesin-like p 100.0 1.3E-59 4.3E-64 508.8 13.2 257 9-268 5-344 (344)
15 2zfi_A Kinesin-like protein KI 100.0 6.3E-60 2.1E-64 514.6 10.7 262 14-278 3-362 (366)
16 3t0q_A AGR253WP; kinesin, alph 100.0 1.2E-58 4E-63 502.0 14.8 261 13-274 3-348 (349)
17 3dc4_A Kinesin-like protein NO 100.0 5.3E-59 1.8E-63 503.0 10.9 261 8-275 15-340 (344)
18 1ry6_A Internal kinesin; kines 100.0 7.9E-59 2.7E-63 504.4 11.9 257 16-278 1-339 (360)
19 1f9v_A Kinesin-like protein KA 100.0 2.7E-58 9.1E-63 498.6 14.1 259 14-275 2-346 (347)
20 2heh_A KIF2C protein; kinesin, 100.0 3.8E-58 1.3E-62 502.0 13.1 255 11-273 47-385 (387)
21 1v8k_A Kinesin-like protein KI 100.0 6E-58 2E-62 503.3 13.6 256 12-275 68-407 (410)
22 2rep_A Kinesin-like protein KI 100.0 6.4E-58 2.2E-62 499.5 13.4 257 12-270 19-376 (376)
23 3nwn_A Kinesin-like protein KI 100.0 3.5E-58 1.2E-62 499.2 9.8 258 11-270 20-359 (359)
24 3gbj_A KIF13B protein; kinesin 100.0 1.6E-57 5.6E-62 493.6 13.0 252 15-269 1-349 (354)
25 4etp_A Kinesin-like protein KA 100.0 2.2E-57 7.4E-62 500.4 12.7 261 14-275 58-402 (403)
26 3u06_A Protein claret segregat 100.0 1.6E-56 5.5E-61 493.8 13.0 253 13-274 57-386 (412)
27 2nr8_A Kinesin-like protein KI 100.0 6.9E-57 2.4E-61 488.9 9.9 256 8-270 16-358 (358)
28 4h1g_A Maltose binding protein 100.0 5.1E-53 1.7E-57 497.5 12.8 259 12-271 371-712 (715)
29 2kin_B Kinesin; motor protein, 99.9 8.7E-24 3E-28 188.8 0.3 86 206-291 1-99 (100)
30 3kin_B Kinesin heavy chain; mo 99.9 4.9E-23 1.7E-27 189.6 4.1 92 210-301 1-115 (117)
31 2o0a_A S.cerevisiae chromosome 99.1 1.2E-10 4E-15 120.9 7.0 215 14-275 23-294 (298)
32 1i84_S Smooth muscle myosin he 97.2 0.0012 4E-08 82.1 12.0 9 242-250 679-687 (1184)
33 1i84_S Smooth muscle myosin he 97.0 0.0017 5.8E-08 80.6 10.6 22 542-563 990-1011(1184)
34 3na7_A HP0958; flagellar bioge 96.3 0.43 1.5E-05 48.9 21.4 37 424-460 94-130 (256)
35 3na7_A HP0958; flagellar bioge 96.3 0.21 7.1E-06 51.3 18.8 65 428-492 91-155 (256)
36 3vkg_A Dynein heavy chain, cyt 96.0 0.5 1.7E-05 63.7 24.3 107 395-501 1983-2095(3245)
37 3vkg_A Dynein heavy chain, cyt 94.7 2 7E-05 58.0 24.0 33 639-673 2371-2403(3245)
38 3oja_B Anopheles plasmodium-re 94.3 0.3 1E-05 55.4 13.2 70 425-494 507-576 (597)
39 3oja_B Anopheles plasmodium-re 94.3 1 3.6E-05 50.9 17.7 13 467-479 535-547 (597)
40 2v71_A Nuclear distribution pr 93.9 5.3 0.00018 39.2 21.0 105 381-485 49-153 (189)
41 4b6x_A AVRRPS4, avirulence pro 93.3 0.087 3E-06 44.2 4.6 54 626-679 26-79 (90)
42 2dfs_A Myosin-5A; myosin-V, in 93.0 1.4 4.7E-05 54.2 16.6 47 432-478 975-1021(1080)
43 2v66_B Nuclear distribution pr 92.9 5 0.00017 36.0 17.3 89 391-479 6-94 (111)
44 3u1c_A Tropomyosin alpha-1 cha 92.7 3.1 0.0001 36.7 14.2 65 412-476 36-100 (101)
45 2dfs_A Myosin-5A; myosin-V, in 91.6 5.1 0.00018 49.2 19.1 31 424-454 981-1011(1080)
46 1ic2_A Tropomyosin alpha chain 91.4 2.3 7.7E-05 36.0 11.2 73 424-496 3-75 (81)
47 1deb_A APC protein, adenomatou 91.2 0.55 1.9E-05 36.0 6.3 47 455-501 3-49 (54)
48 3ol1_A Vimentin; structural ge 90.8 8 0.00027 35.0 15.0 82 426-507 26-107 (119)
49 4h22_A Leucine-rich repeat fli 90.3 2.9 9.9E-05 36.9 11.0 67 385-451 13-82 (103)
50 3u59_A Tropomyosin beta chain; 90.1 7 0.00024 34.3 13.6 64 412-475 36-99 (101)
51 3hnw_A Uncharacterized protein 88.6 2.9 9.9E-05 39.0 10.5 21 461-481 109-129 (138)
52 3mq7_A Bone marrow stromal ant 87.4 7.9 0.00027 34.8 11.8 41 468-508 70-110 (121)
53 3swk_A Vimentin; cytoskeleton, 87.3 6.9 0.00024 33.5 11.3 79 423-501 3-81 (86)
54 2fxo_A Myosin heavy chain, car 84.3 24 0.00084 32.1 17.4 24 422-445 43-66 (129)
55 3o0z_A RHO-associated protein 84.2 30 0.001 33.2 21.2 67 442-508 70-136 (168)
56 2v71_A Nuclear distribution pr 84.0 34 0.0011 33.5 22.1 61 385-445 21-81 (189)
57 3hnw_A Uncharacterized protein 83.8 7.5 0.00026 36.2 10.6 30 464-493 105-134 (138)
58 3iox_A AGI/II, PA; alpha helix 83.6 26 0.00089 39.0 16.3 48 393-440 7-54 (497)
59 3i00_A HIP-I, huntingtin-inter 82.5 7.3 0.00025 35.5 9.6 51 395-445 15-65 (120)
60 3a7p_A Autophagy protein 16; c 82.3 18 0.00062 34.1 12.4 52 460-511 94-145 (152)
61 3tnu_B Keratin, type II cytosk 82.1 16 0.00055 33.3 12.1 35 423-457 39-73 (129)
62 3s84_A Apolipoprotein A-IV; fo 81.7 51 0.0017 33.9 20.0 13 579-591 191-203 (273)
63 2jee_A YIIU; FTSZ, septum, coi 81.2 23 0.00078 30.0 11.5 41 470-510 35-75 (81)
64 3r2p_A Apolipoprotein A-I; amp 80.6 11 0.00038 36.4 11.0 154 540-703 9-178 (185)
65 3q8t_A Beclin-1; autophagy, AT 79.1 31 0.0011 29.9 14.2 79 419-497 17-95 (96)
66 3tnu_A Keratin, type I cytoske 78.9 17 0.00057 33.3 11.0 34 415-448 40-73 (131)
67 1x79_B RAB GTPase binding effe 78.3 38 0.0013 30.4 12.7 32 418-449 4-35 (112)
68 2ocy_A RAB guanine nucleotide 76.9 51 0.0017 31.2 17.8 81 418-498 56-144 (154)
69 2jee_A YIIU; FTSZ, septum, coi 76.0 24 0.00082 29.9 10.0 69 409-491 9-77 (81)
70 1fxk_A Prefoldin; archaeal pro 75.7 39 0.0013 29.2 12.7 77 421-497 9-100 (107)
71 3a7p_A Autophagy protein 16; c 75.4 27 0.00093 32.9 11.3 60 443-502 70-129 (152)
72 3ol1_A Vimentin; structural ge 75.1 47 0.0016 29.9 13.9 15 465-479 86-100 (119)
73 3u1c_A Tropomyosin alpha-1 cha 75.1 42 0.0014 29.3 14.9 64 427-490 9-72 (101)
74 1ic2_A Tropomyosin alpha chain 75.1 36 0.0012 28.5 11.6 45 412-456 33-77 (81)
75 2zqm_A Prefoldin beta subunit 74.8 43 0.0015 29.3 12.6 76 421-496 14-104 (117)
76 1x79_B RAB GTPase binding effe 74.1 49 0.0017 29.6 13.8 93 392-487 10-102 (112)
77 1go4_E MAD1 (mitotic arrest de 72.3 24 0.00083 31.0 9.6 42 418-459 10-53 (100)
78 1wlq_A Geminin; coiled-coil; 2 70.7 16 0.00054 31.1 7.6 50 462-512 31-80 (83)
79 3swk_A Vimentin; cytoskeleton, 70.0 50 0.0017 28.1 10.9 75 423-497 10-84 (86)
80 1l8d_A DNA double-strand break 70.0 55 0.0019 28.5 12.4 34 421-454 11-44 (112)
81 2v4h_A NF-kappa-B essential mo 68.4 48 0.0016 29.5 10.6 57 387-443 44-106 (110)
82 3ghg_A Fibrinogen alpha chain; 67.8 53 0.0018 36.8 13.2 23 466-488 114-136 (562)
83 1gs9_A Apolipoprotein E, APOE4 67.8 10 0.00035 36.3 6.8 90 539-638 25-122 (165)
84 2e7s_A RAB guanine nucleotide 67.7 36 0.0012 31.5 10.1 78 422-499 48-133 (135)
85 2eqb_B RAB guanine nucleotide 66.9 65 0.0022 28.1 13.7 53 418-470 24-77 (97)
86 3iox_A AGI/II, PA; alpha helix 66.4 1.6E+02 0.0056 32.7 16.7 58 388-445 9-66 (497)
87 3ghg_A Fibrinogen alpha chain; 64.6 56 0.0019 36.6 12.6 15 432-446 115-129 (562)
88 2efl_A Formin-binding protein 64.5 1.2E+02 0.0042 30.5 21.3 39 432-470 121-159 (305)
89 1m1j_B Fibrinogen beta chain; 64.4 1.8E+02 0.0061 32.3 17.3 15 381-395 93-107 (464)
90 3u59_A Tropomyosin beta chain; 64.3 72 0.0025 27.7 14.8 65 428-492 10-74 (101)
91 3tnu_A Keratin, type I cytoske 63.7 87 0.003 28.4 12.4 46 413-458 31-76 (131)
92 2eqb_B RAB guanine nucleotide 62.3 80 0.0027 27.6 13.8 58 421-478 6-63 (97)
93 2zxx_A Geminin; coiled-coil, c 60.8 21 0.00072 30.1 6.5 50 462-512 27-76 (79)
94 1m1j_C Fibrinogen gamma chain; 60.7 97 0.0033 33.8 13.7 78 431-509 45-124 (409)
95 2lw1_A ABC transporter ATP-bin 58.9 53 0.0018 27.8 9.1 63 425-488 20-82 (89)
96 4h22_A Leucine-rich repeat fli 58.4 69 0.0024 28.2 9.7 51 429-479 25-75 (103)
97 2wvr_A Geminin; DNA replicatio 58.3 38 0.0013 33.3 8.8 50 464-514 110-159 (209)
98 2efr_A General control protein 58.0 1.3E+02 0.0043 28.5 20.8 26 484-509 99-124 (155)
99 3o0z_A RHO-associated protein 57.3 1.4E+02 0.0047 28.6 19.1 18 336-353 6-23 (168)
100 2w6a_A ARF GTPase-activating p 55.9 58 0.002 25.9 7.8 35 462-496 27-61 (63)
101 3oja_A Leucine-rich immune mol 54.5 1.3E+02 0.0046 32.7 13.9 9 489-497 441-449 (487)
102 3q8t_A Beclin-1; autophagy, AT 54.2 1.1E+02 0.0037 26.5 13.7 69 430-498 7-75 (96)
103 3i00_A HIP-I, huntingtin-inter 54.2 1.3E+02 0.0043 27.3 11.2 43 391-433 18-60 (120)
104 3a7o_A Autophagy protein 16; c 54.1 73 0.0025 26.1 8.3 35 463-497 40-74 (75)
105 1t6f_A Geminin; coiled-coil, c 54.0 21 0.00073 25.4 4.5 30 469-498 7-36 (37)
106 3s4r_A Vimentin; alpha-helix, 53.4 1.1E+02 0.0037 26.3 12.3 73 370-445 15-88 (93)
107 3haj_A Human pacsin2 F-BAR; pa 52.7 2.7E+02 0.0091 30.6 22.0 27 439-465 141-167 (486)
108 3tnu_B Keratin, type II cytosk 52.5 1.3E+02 0.0045 27.1 13.0 39 413-451 36-74 (129)
109 2no2_A HIP-I, huntingtin-inter 51.2 1.3E+02 0.0044 26.6 16.0 34 420-453 47-80 (107)
110 2yy0_A C-MYC-binding protein; 50.8 21 0.00072 27.7 4.6 33 419-451 18-50 (53)
111 1ci6_A Transcription factor AT 50.3 47 0.0016 26.5 6.8 35 464-498 25-59 (63)
112 2lw1_A ABC transporter ATP-bin 49.4 49 0.0017 28.0 7.3 24 388-411 22-45 (89)
113 3oja_A Leucine-rich immune mol 49.1 2.9E+02 0.0099 29.9 15.8 28 481-508 440-467 (487)
114 3iv1_A Tumor susceptibility ge 47.6 1.2E+02 0.0043 25.3 10.4 57 453-509 16-72 (78)
115 1uii_A Geminin; human, DNA rep 47.2 53 0.0018 27.9 6.8 39 464-502 41-79 (83)
116 3nmd_A CGMP dependent protein 46.2 47 0.0016 27.5 6.2 38 461-498 32-69 (72)
117 3vem_A Helicase protein MOM1; 46.0 1.1E+02 0.0038 27.4 9.1 20 446-465 66-85 (115)
118 3q0x_A Centriole protein; cent 45.8 63 0.0022 32.5 8.5 54 413-466 171-224 (228)
119 2lem_A Apolipoprotein A-I; lip 45.7 78 0.0027 31.2 9.2 35 540-574 7-41 (216)
120 3cve_A Homer protein homolog 1 44.7 1.3E+02 0.0045 24.8 9.8 63 426-495 6-68 (72)
121 1m1j_B Fibrinogen beta chain; 44.3 3.6E+02 0.012 29.8 16.1 11 424-434 125-135 (464)
122 2v4h_A NF-kappa-B essential mo 44.1 1.7E+02 0.0059 26.0 10.6 14 480-493 94-107 (110)
123 3mq9_A Bone marrow stromal ant 43.6 3.4E+02 0.012 29.2 16.1 28 469-496 443-470 (471)
124 1uru_A Amphiphysin; endocytosi 43.4 2E+02 0.0067 28.0 11.9 45 652-696 163-207 (244)
125 3m9b_A Proteasome-associated A 43.1 17 0.00059 37.0 3.9 42 457-498 56-97 (251)
126 2k48_A Nucleoprotein; viral pr 42.6 1.8E+02 0.0061 25.7 10.8 31 421-451 36-66 (107)
127 1deq_A Fibrinogen (alpha chain 42.5 3.5E+02 0.012 29.1 14.5 23 491-513 135-157 (390)
128 3cvf_A Homer-3, homer protein 41.6 1.6E+02 0.0054 24.8 10.1 26 426-451 12-37 (79)
129 3cvf_A Homer-3, homer protein 40.8 1.4E+02 0.0047 25.1 8.4 48 421-468 21-68 (79)
130 3qh9_A Liprin-beta-2; coiled-c 39.2 1.7E+02 0.0059 24.6 9.4 29 464-492 49-77 (81)
131 1gmj_A ATPase inhibitor; coile 38.6 92 0.0031 26.5 7.0 31 616-646 45-75 (84)
132 3jsv_C NF-kappa-B essential mo 38.0 1.6E+02 0.0056 25.5 8.6 41 402-442 40-83 (94)
133 3swy_A Cyclic nucleotide-gated 37.5 1.3E+02 0.0045 22.7 7.2 42 411-452 3-44 (46)
134 1uii_A Geminin; human, DNA rep 37.0 1.2E+02 0.0041 25.7 7.5 36 376-411 34-69 (83)
135 1deq_A Fibrinogen (alpha chain 37.0 4.3E+02 0.015 28.4 15.3 53 424-476 96-148 (390)
136 3c98_B Syntaxin-1A; protein co 36.6 3.1E+02 0.011 26.7 12.9 86 462-567 85-170 (279)
137 3trt_A Vimentin; cytoskeleton, 35.8 1.8E+02 0.006 23.6 10.2 24 473-496 53-76 (77)
138 1ez3_A Syntaxin-1A; three heli 35.7 2.2E+02 0.0077 24.9 14.4 67 384-451 8-74 (127)
139 1go4_E MAD1 (mitotic arrest de 35.6 2.2E+02 0.0076 24.9 9.3 21 424-444 72-92 (100)
140 2yy0_A C-MYC-binding protein; 35.0 45 0.0015 25.9 4.3 32 462-493 19-50 (53)
141 1wlq_A Geminin; coiled-coil; 2 34.4 1.2E+02 0.0042 25.6 7.1 38 375-412 25-62 (83)
142 3d2f_A Heat shock protein homo 34.4 3.3E+02 0.011 31.3 13.5 52 458-509 600-651 (675)
143 2b9c_A Striated-muscle alpha t 33.9 2.9E+02 0.01 25.6 11.3 103 369-478 43-145 (147)
144 4emc_A Monopolin complex subun 33.0 2.1E+02 0.0071 27.9 9.4 18 505-524 69-86 (190)
145 3okq_A BUD site selection prot 32.6 59 0.002 30.3 5.3 65 617-681 16-80 (141)
146 2efk_A CDC42-interacting prote 32.0 4E+02 0.014 26.6 22.8 92 430-521 112-218 (301)
147 1gd2_E Transcription factor PA 31.7 75 0.0026 26.0 5.3 10 442-451 30-39 (70)
148 3cve_A Homer protein homolog 1 31.7 2.2E+02 0.0074 23.5 10.2 55 418-472 12-66 (72)
149 2i1j_A Moesin; FERM, coiled-co 31.2 35 0.0012 38.9 4.5 37 464-500 414-450 (575)
150 3mq7_A Bone marrow stromal ant 31.2 2.9E+02 0.01 24.8 14.0 17 461-477 91-107 (121)
151 2e7s_A RAB guanine nucleotide 30.7 2.4E+02 0.0083 26.0 9.1 7 469-475 74-80 (135)
152 2ocy_A RAB guanine nucleotide 30.6 3.5E+02 0.012 25.5 19.4 15 464-478 81-95 (154)
153 4dk0_A Putative MACA; alpha-ha 30.5 1.8E+02 0.0062 30.1 9.7 32 464-495 117-148 (369)
154 3mud_A DNA repair protein XRCC 30.2 1.2E+02 0.004 29.3 7.2 41 411-451 126-166 (175)
155 2dq0_A Seryl-tRNA synthetase; 30.2 1.9E+02 0.0065 31.8 10.0 34 422-455 71-104 (455)
156 3qne_A Seryl-tRNA synthetase, 30.2 37 0.0013 37.9 4.3 34 611-644 36-69 (485)
157 2i1j_A Moesin; FERM, coiled-co 30.1 54 0.0018 37.3 5.7 68 425-492 389-456 (575)
158 1gk4_A Vimentin; intermediate 30.1 2.4E+02 0.0082 23.5 9.8 40 404-443 10-49 (84)
159 1x8y_A Lamin A/C; structural p 29.8 1.7E+02 0.0059 24.6 7.5 19 429-447 5-23 (86)
160 2ke4_A CDC42-interacting prote 29.5 2.8E+02 0.0095 24.0 9.1 62 423-488 18-88 (98)
161 3mq9_A Bone marrow stromal ant 29.5 5.5E+02 0.019 27.5 15.7 24 118-141 130-153 (471)
162 1wle_A Seryl-tRNA synthetase; 28.9 3.4E+02 0.012 30.2 11.9 32 423-454 119-150 (501)
163 2dq0_A Seryl-tRNA synthetase; 28.4 36 0.0012 37.7 3.8 34 611-644 34-67 (455)
164 3r6n_A Desmoplakin; spectrin r 27.7 6.3E+02 0.022 27.6 17.7 66 387-452 132-197 (450)
165 2dq3_A Seryl-tRNA synthetase; 27.6 30 0.001 37.9 3.0 76 611-688 33-108 (425)
166 2ic6_A Nucleocapsid protein; h 27.4 2.7E+02 0.0093 23.3 9.9 33 419-451 4-36 (78)
167 3swf_A CGMP-gated cation chann 26.9 2.5E+02 0.0086 23.3 7.6 42 411-452 5-46 (74)
168 2v66_B Nuclear distribution pr 26.8 3.4E+02 0.012 24.2 16.4 52 411-462 40-91 (111)
169 1t2k_D Cyclic-AMP-dependent tr 26.6 1.6E+02 0.0054 23.0 6.3 6 489-494 49-54 (61)
170 2wuj_A Septum site-determining 26.2 96 0.0033 24.2 4.9 24 417-440 31-54 (57)
171 1s94_A S-syntaxin; three helix 26.1 4.1E+02 0.014 24.9 12.8 69 383-452 38-106 (180)
172 2ic9_A Nucleocapsid protein; h 25.9 3.3E+02 0.011 23.7 9.1 32 420-451 5-36 (96)
173 3ghg_C Fibrinogen gamma chain; 25.9 6.6E+02 0.023 27.2 13.2 38 473-510 88-125 (411)
174 3s84_A Apolipoprotein A-IV; fo 25.7 5.4E+02 0.018 26.1 21.6 21 412-432 80-100 (273)
175 3htk_A Structural maintenance 25.5 2.3E+02 0.0078 21.7 8.3 11 442-452 20-30 (60)
176 2wt7_A Proto-oncogene protein 25.4 1.7E+02 0.0058 23.1 6.3 12 486-497 47-58 (63)
177 1ik9_A DNA repair protein XRCC 25.3 4.9E+02 0.017 25.5 14.6 17 475-491 181-197 (213)
178 3v86_A De novo design helix; c 25.1 1E+02 0.0035 20.0 3.8 22 425-446 5-26 (27)
179 2wvr_A Geminin; DNA replicatio 24.4 2E+02 0.0067 28.3 7.6 32 376-407 103-134 (209)
180 4etp_A Kinesin-like protein KA 24.2 1.5E+02 0.0051 32.1 7.7 27 425-451 8-34 (403)
181 3aco_A Pacsin2, protein kinase 24.0 6.1E+02 0.021 26.1 20.5 37 432-468 141-177 (350)
182 1ci6_A Transcription factor AT 23.6 1.9E+02 0.0063 22.9 6.2 31 468-498 22-52 (63)
183 1wt6_A Myotonin-protein kinase 23.4 3.3E+02 0.011 22.9 8.6 22 426-447 30-51 (81)
184 2efr_A General control protein 23.4 4.7E+02 0.016 24.6 21.8 63 431-493 67-129 (155)
185 2dgc_A Protein (GCN4); basic d 23.4 1.1E+02 0.0039 24.3 4.9 30 469-498 30-59 (63)
186 3iv1_A Tumor susceptibility ge 23.3 3.3E+02 0.011 22.8 11.0 15 393-407 16-30 (78)
187 3w03_C DNA repair protein XRCC 23.0 2E+02 0.0067 28.0 7.4 24 387-410 151-174 (184)
188 2w83_C C-JUN-amino-terminal ki 23.0 3.3E+02 0.011 22.7 7.9 38 475-512 36-73 (77)
189 3m91_A Proteasome-associated A 23.0 2.4E+02 0.0082 21.6 6.4 42 454-495 8-49 (51)
190 1i6z_A BAG-family molecular ch 22.6 4.5E+02 0.016 24.1 11.0 68 499-581 61-130 (135)
191 1ses_A Seryl-tRNA synthetase; 22.4 2.1E+02 0.0073 31.0 8.5 32 423-454 67-98 (421)
192 3vp9_A General transcriptional 22.2 2.7E+02 0.0093 24.0 7.3 47 393-439 41-87 (92)
193 2zxx_A Geminin; coiled-coil, c 22.2 3.5E+02 0.012 22.7 8.8 32 376-407 22-53 (79)
194 4emc_A Monopolin complex subun 22.1 3.3E+02 0.011 26.4 8.7 26 412-437 12-37 (190)
195 1t6f_A Geminin; coiled-coil, c 22.0 1.3E+02 0.0046 21.4 4.3 13 459-471 18-30 (37)
196 2oto_A M protein; helical coil 21.9 4.7E+02 0.016 24.0 14.0 91 430-524 25-116 (155)
197 1gmj_A ATPase inhibitor; coile 21.9 2.5E+02 0.0085 23.8 6.8 30 482-511 50-79 (84)
198 3s9g_A Protein hexim1; cyclin 21.8 4E+02 0.014 23.2 9.3 55 384-442 33-87 (104)
199 3nmd_A CGMP dependent protein 21.6 2.1E+02 0.0073 23.5 6.2 7 471-477 56-62 (72)
200 1nfn_A Apolipoprotein E3; lipi 21.2 3.1E+02 0.01 26.4 8.6 106 545-679 31-160 (191)
201 3mov_A Lamin-B1; LMNB1, B-type 21.2 2E+02 0.0068 24.8 6.4 22 428-449 13-34 (95)
202 2qyw_A Vesicle transport throu 21.2 4E+02 0.014 23.0 11.1 17 480-496 82-98 (102)
203 4fi5_A Nucleoprotein; structur 21.1 4.4E+02 0.015 23.4 9.5 30 422-451 24-53 (113)
204 2l7b_A Apolipoprotein E, APO-E 21.0 4.5E+02 0.015 27.3 10.3 205 385-632 63-274 (307)
205 4ani_A Protein GRPE; chaperone 20.7 3.9E+02 0.013 26.3 9.3 36 468-503 65-100 (213)
206 3abh_A Pacsin2, protein kinase 20.0 6.7E+02 0.023 25.2 19.6 40 432-471 141-180 (312)
No 1
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=1.3e-65 Score=558.44 Aligned_cols=272 Identities=60% Similarity=0.800 Sum_probs=234.7
Q ss_pred cCCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeeeCCeeeecceecCCCCChHHHHHHhhhhcceeeecC-
Q psy5718 9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD- 87 (720)
Q Consensus 9 ~~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G- 87 (720)
|+.+.+++|+|+|||||+++.|...+...++.++++.....+.++++.|.||+||+++++|++||+.++.|+|+++|+|
T Consensus 5 ~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~ 84 (365)
T 2y65_A 5 REIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGY 84 (365)
T ss_dssp ---CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTC
T ss_pred ccCCCCCCeEEEEEcCcCChhHhccCCceEEEeCCCCCCcEEEECCEEEeCceEecCCCCHHHHHHHhhhhHHHHHhCCC
Confidence 4566789999999999999999888888889888764445788899999999999999999999999999999999999
Q ss_pred -----------------------CCCceeehhhhhhhhhhhhhhcccccceeE---------------------------
Q psy5718 88 -----------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL--------------------------- 117 (720)
Q Consensus 88 -----------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v--------------------------- 117 (720)
++..+|||||++.+||..+........|.+
T Consensus 85 n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e 164 (365)
T 2y65_A 85 NGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHE 164 (365)
T ss_dssp CEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCSBCEEE
T ss_pred ceEEEeecCCCCCCceEEecCCCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCcCCceEEE
Confidence 245689999999999999987655554444
Q ss_pred -----EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeeeeccCCcc
Q psy5718 118 -----IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLVDLAGSEK 192 (720)
Q Consensus 118 -----~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lVDLAGSEr 192 (720)
+||+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....|+|+|||||||||
T Consensus 165 ~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr 244 (365)
T 2y65_A 165 DKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEK 244 (365)
T ss_dssp CSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC
T ss_pred CCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCCCEeEEEEEEEECCCCCc
Confidence 799999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred cccCCCcccchHHhhhhccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhccccCCcccHHHHHhHH
Q psy5718 193 VSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAI 261 (720)
Q Consensus 193 ~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL 261 (720)
++++++.|.+++|+.+||+||++||+| +|+++. .||||||||||+|||| +||+||||+..+++||++||
T Consensus 245 ~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL 324 (365)
T 2y65_A 245 VSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTL 324 (365)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHH
T ss_pred chhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHH
Confidence 999999999999999999999999999 999875 8999999999999999 89999999999999999999
Q ss_pred HHHHHhccccccchhhhHH
Q psy5718 262 EYEKELGETRLLLQTNERR 280 (720)
Q Consensus 262 ~fa~rak~Ikn~~~vN~~~ 280 (720)
+||.||+.|+|.|.+|...
T Consensus 325 ~fA~rak~I~n~~~~n~~~ 343 (365)
T 2y65_A 325 DFGRRAKTVKNVVCVNEEL 343 (365)
T ss_dssp HHHHHHTTCEEECCCEEEC
T ss_pred HHHHHHhcccCcceeCCCC
Confidence 9999999999999999854
No 2
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=2.6e-63 Score=533.34 Aligned_cols=259 Identities=49% Similarity=0.668 Sum_probs=240.9
Q ss_pred cCCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeeeCCeeeecceecCCCCChHHHHHHhhhhcceeeecC-
Q psy5718 9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD- 87 (720)
Q Consensus 9 ~~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G- 87 (720)
|+++.+++|+|+|||||+++.|...++..++.+++++ ++.++++.|.||+||+++++|++||+.++.|+|+++|+|
T Consensus 1 ~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~---~~~~~~~~f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~ 77 (325)
T 1bg2_A 1 MADLAECNIKVMCRFRPLNESEVNRGDKYIAKFQGED---TVVIASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGY 77 (325)
T ss_dssp --CCSSCEEEEEEEECCCCHHHHHHTCCBCCEEETTT---EEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTC
T ss_pred CCCCCCCCEEEEEEcCCCChhHhccCCeeEEEECCCC---eEEECCEEEECCeEeCCCCCHHHHHHHHhhhhHHHHhCCC
Confidence 3566789999999999999999988888888888776 788889999999999999999999999999999999999
Q ss_pred -----------------------CCCceeehhhhhhhhhhhhhhcccccceeE---------------------------
Q psy5718 88 -----------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL--------------------------- 117 (720)
Q Consensus 88 -----------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v--------------------------- 117 (720)
++..+|||||++.+||..+........|.+
T Consensus 78 n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l~i~e 157 (325)
T 1bg2_A 78 NGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHE 157 (325)
T ss_dssp CEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEE
T ss_pred eEEEEEECCCCCCCceEecccCCCcccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCCCCCceEEE
Confidence 245679999999999999977655544443
Q ss_pred -----EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeeeeccCCcc
Q psy5718 118 -----IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLVDLAGSEK 192 (720)
Q Consensus 118 -----~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lVDLAGSEr 192 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+........|+|+|||||||||
T Consensus 158 ~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skl~lVDLAGSEr 237 (325)
T 1bg2_A 158 DKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEK 237 (325)
T ss_dssp CTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSCC
T ss_pred CCCCCEEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecCCCcEEEEEEEEEECCCCCc
Confidence 799999999999999999999999999999999999999999999999999998887788899999999999999
Q ss_pred cccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHHHHHhHHH
Q psy5718 193 VSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAIE 262 (720)
Q Consensus 193 ~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL~ 262 (720)
++++++.|.+++|+.+||+||++||+| +|+++..||||||||||||||| +||+||||+..+++||++||+
T Consensus 238 ~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~ 317 (325)
T 1bg2_A 238 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLL 317 (325)
T ss_dssp CCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccccCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999 899999999999999999999
Q ss_pred HHHHhccc
Q psy5718 263 YEKELGET 270 (720)
Q Consensus 263 fa~rak~I 270 (720)
||+|||+|
T Consensus 318 fa~rak~I 325 (325)
T 1bg2_A 318 FGQRAKTI 325 (325)
T ss_dssp HHHTSCCC
T ss_pred HHHHhccC
Confidence 99999987
No 3
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=1.7e-62 Score=532.58 Aligned_cols=263 Identities=32% Similarity=0.426 Sum_probs=242.5
Q ss_pred CCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeeeC----CeeeecceecCCCCChHHHHHHhhhhcceeeecC--
Q psy5718 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG----GKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD-- 87 (720)
Q Consensus 14 ~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~~----~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G-- 87 (720)
.++|+|+|||||+++.|...+...++.++++. .+.+. .+.|.||+||+++++|++||+.++.|+|+++|+|
T Consensus 5 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~---~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n 81 (355)
T 1goj_A 5 ANSIKVVARFRPQNRVEIESGGQPIVTFQGPD---TCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYN 81 (355)
T ss_dssp SCBCEEEEEECCCCHHHHTTTCCBCEEECSTT---EEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCC
T ss_pred CCCeEEEEECCCCChHHhhcCCceEEEEcCCC---eEEEccCCCccEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCc
Confidence 58999999999999999888888889888776 33332 4789999999999999999999999999999999
Q ss_pred -----------------------CCCceeehhhhhhhhhhhhhhcccccceeE---------------------------
Q psy5718 88 -----------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL--------------------------- 117 (720)
Q Consensus 88 -----------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v--------------------------- 117 (720)
++..+|||||++.+||..+........|.+
T Consensus 82 ~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e 161 (355)
T 1goj_A 82 GTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHE 161 (355)
T ss_dssp EEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEE
T ss_pred ceEEEECCCCCCcceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCccCCceeEE
Confidence 135689999999999999876554444433
Q ss_pred -----EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeeeeccCCcc
Q psy5718 118 -----IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLVDLAGSEK 192 (720)
Q Consensus 118 -----~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lVDLAGSEr 192 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+..++....|+|+|||||||||
T Consensus 162 ~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr 241 (355)
T 1goj_A 162 EKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEK 241 (355)
T ss_dssp ETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCSC
T ss_pred cCCCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccCCCceeeeEEEEEECCCCCc
Confidence 899999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred cccCCCcccchHHhhhhccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhccccCCcccHHHHHhHH
Q psy5718 193 VSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAI 261 (720)
Q Consensus 193 ~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL 261 (720)
++++++.|.+++|+.+||+||++||+| +|+++. .||||||||||||||| +||+||||+..+++||++||
T Consensus 242 ~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL 321 (355)
T 1goj_A 242 VGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTL 321 (355)
T ss_dssp CTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHH
T ss_pred ccccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHH
Confidence 999999999999999999999999999 999875 8999999999999999 89999999999999999999
Q ss_pred HHHHHhccccccchhhhH
Q psy5718 262 EYEKELGETRLLLQTNER 279 (720)
Q Consensus 262 ~fa~rak~Ikn~~~vN~~ 279 (720)
+||+|||.|+|.|.+|..
T Consensus 322 ~fA~rak~I~n~~~vn~~ 339 (355)
T 1goj_A 322 RFGMRAKSIKNKAKVNAE 339 (355)
T ss_dssp HHHHHHHTCBCCCCCCSS
T ss_pred HHHHHHhhccCCceeCCC
Confidence 999999999999999983
No 4
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=1.2e-62 Score=535.56 Aligned_cols=276 Identities=28% Similarity=0.316 Sum_probs=243.7
Q ss_pred CCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-----CCeeeecceecCCCCChHHHHHHhhhhcceeeecC-
Q psy5718 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-----GGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD- 87 (720)
Q Consensus 14 ~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-----~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G- 87 (720)
+++|+|+|||||+++.|...+...++...+.. ++.. ..+.|.||+||+++++|++||+. +.|+|+++|+|
T Consensus 4 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~---~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l~G~ 79 (369)
T 3cob_A 4 KGKIRVYCRLRPLCEKEIIAKERNAIRSVDEF---TVEHLWKDDKAKQHMYDRVFDGNATQDDVFED-TKYLVQSAVDGY 79 (369)
T ss_dssp CCBCEEEEEECCCCHHHHHTTCCBCEEECSSS---EEEEECTTSCEEEEECSEEECTTCCHHHHHHT-TTHHHHHHHTTC
T ss_pred CCCeEEEEECCCCChhhccCCCcEEEEcCCcE---EEEecCCCCCceEEecCEEECCCCCcceehhh-hhhhhHhhhcCC
Confidence 58999999999999999776665444333221 3322 13789999999999999999999 69999999999
Q ss_pred --------------------CCCceeehhhhhhhhhhhhhhcccccceeE------------------------------
Q psy5718 88 --------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL------------------------------ 117 (720)
Q Consensus 88 --------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v------------------------------ 117 (720)
++..+|||||++.+||..+......+.|.+
T Consensus 80 n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e 159 (369)
T 3cob_A 80 NVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKK 159 (369)
T ss_dssp EEEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEE
T ss_pred ceEEEEECCCCCCCeEeecCCCCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEE
Confidence 567899999999999999876544333332
Q ss_pred -----EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeeeeccCCcc
Q psy5718 118 -----IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLVDLAGSEK 192 (720)
Q Consensus 118 -----~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lVDLAGSEr 192 (720)
++|+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+..++....|+|+|||||||||
T Consensus 160 ~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr 239 (369)
T 3cob_A 160 DSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSER 239 (369)
T ss_dssp CTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSSC
T ss_pred CCCCCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCCCCcEEEEEEEEEeCCCCCc
Confidence 799999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred cccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHHHHHhHHH
Q psy5718 193 VSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAIE 262 (720)
Q Consensus 193 ~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL~ 262 (720)
+.++++.|.+++|+.+||+||++||+| +|+++..||||||||||||||| +||+||||+..+++||++||+
T Consensus 240 ~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLr 319 (369)
T 3cob_A 240 VKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLT 319 (369)
T ss_dssp CCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999 899999999999999999999
Q ss_pred HHHHhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 263 YEKELGETRLLLQTNERREQARKDLKGLEDTVTKELQTL 301 (720)
Q Consensus 263 fa~rak~Ikn~~~vN~~~~~~~~~Lk~ei~~Lk~EL~~l 301 (720)
||+||+.|+|.|.+|... .+|..|+.++..|
T Consensus 320 fA~rak~i~~~~~~n~~~--------~ei~~L~~~l~~~ 350 (369)
T 3cob_A 320 YASRVRSIVNDPSKNVSS--------KEVARLKKLVSYW 350 (369)
T ss_dssp HHHHHHTCBCCCCCCEEC--------HHHHHHHHHTTCC
T ss_pred HHHHHhhcccCCcccCCH--------HHHHHHHHHHHHH
Confidence 999999999999999976 3455555555444
No 5
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=2.7e-62 Score=529.73 Aligned_cols=267 Identities=27% Similarity=0.352 Sum_probs=212.4
Q ss_pred CCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee------------CCeeeecceecCCCCChHHHHHHhhhhcc
Q psy5718 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL------------GGKFYLFDKVFKPNATQEKVYDEAAKSIV 81 (720)
Q Consensus 14 ~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~------------~~k~F~FD~VF~~~asQeeVY~~~~~plV 81 (720)
.++|+|+|||||+++.|...+...++.++++.....+.. ..+.|.||+||+++++|++||+.++.|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCeEEEEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccccccCCCceEeeCCEEECCCcchhHHHHHHHHHHH
Confidence 478999999999999998888887887765432222211 14789999999999999999999999999
Q ss_pred eeeecC---------------------CCCceeehhhhhhhhhhhhhhcccccceeE-----------------------
Q psy5718 82 SVQFVD---------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL----------------------- 117 (720)
Q Consensus 82 ~~vl~G---------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v----------------------- 117 (720)
+++|+| ++..+|||||++.+||..+........|.+
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~l~ 162 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNNTKLP 162 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTTEEEEC
T ss_pred HHHhCCCceeEEeecCCCCCCCEEeecCCccCchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccCCcCce
Confidence 999999 567899999999999999975444444333
Q ss_pred --------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCc--ccccceeeeeec
Q psy5718 118 --------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENE--KKLSGKLYLVDL 187 (720)
Q Consensus 118 --------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~--~~~~skL~lVDL 187 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+ ....|+|+||||
T Consensus 163 i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~lVDL 242 (350)
T 2vvg_A 163 LKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLNLVDL 242 (350)
T ss_dssp EEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----CEEEEEEEEEEEC
T ss_pred eeEcCCCCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeeccCCCccEEEEEEEEEeC
Confidence 8999999999999999999999999999999999999999999999999998765433 356799999999
Q ss_pred cCCcccccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHHHH
Q psy5718 188 AGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAEEH 257 (720)
Q Consensus 188 AGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ET 257 (720)
|||||++++++.|.+++|+.+||+||++||+| +|+++..||||||||||||||| +||+||||+..+++||
T Consensus 243 AGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ET 322 (350)
T 2vvg_A 243 AGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDET 322 (350)
T ss_dssp CCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHH
T ss_pred CCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHH
Confidence 99999999999999999999999999999999 9999999999999999999999 8999999999999999
Q ss_pred HhHHHHHHHhccccccchhhhHH
Q psy5718 258 KKAIEYEKELGETRLLLQTNERR 280 (720)
Q Consensus 258 lsTL~fa~rak~Ikn~~~vN~~~ 280 (720)
++||+||.||+.|+|.|.+|+++
T Consensus 323 l~TL~fA~rak~i~n~~~~n~~~ 345 (350)
T 2vvg_A 323 MSTLRYADRAKQIKNKPRINEDP 345 (350)
T ss_dssp HHHHHHHHHHTTCBCCCCCCBSC
T ss_pred HHHHHHHHHHhhccccceecCCc
Confidence 99999999999999999999743
No 6
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=6e-62 Score=530.25 Aligned_cols=272 Identities=28% Similarity=0.332 Sum_probs=223.6
Q ss_pred cCCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------CCeeeecceecCCCCChHHHHHHhhhhcc
Q psy5718 9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------GGKFYLFDKVFKPNATQEKVYDEAAKSIV 81 (720)
Q Consensus 9 ~~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------~~k~F~FD~VF~~~asQeeVY~~~~~plV 81 (720)
......++|+|+|||||+++.|...+...++.++++.....+.. ..+.|.||+||+++++|++||+.++.|+|
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv 94 (372)
T 3b6u_A 15 YFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLV 94 (372)
T ss_dssp ------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHHH
T ss_pred ccCCCCCCeEEEEEcCCCChhhhccCCceEEEEeCCCCEEEEECCCCCCCCCceEEEcCeEeCCcCchHHHHHHHHHHHH
Confidence 34466789999999999999998888888888766543222221 24789999999999999999999999999
Q ss_pred eeeecC------------------------CCCceeehhhhhhhhhhhhhhcccccceeE--------------------
Q psy5718 82 SVQFVD------------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL-------------------- 117 (720)
Q Consensus 82 ~~vl~G------------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v-------------------- 117 (720)
+++|+| ++..+|||||++.+||..+... ....|.+
T Consensus 95 ~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~ 173 (372)
T 3b6u_A 95 DSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRS-QNQQYLVRASYLEIYQEEIRDLLSKDQ 173 (372)
T ss_dssp HHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTC-SSCEEEEEEEEEEEETTEEEETTSSCT
T ss_pred HHHhCCCeeeEEeecCCCCCCCEeEecCCCCcccCCcHHHHHHHHHHHhhhc-cCCceEEEEEEEEEeCCEEEECCCCCC
Confidence 999999 2356799999999999998752 2222222
Q ss_pred -------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC---Ccccccce
Q psy5718 118 -------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE---NEKKLSGK 181 (720)
Q Consensus 118 -------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~---~~~~~~sk 181 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+.. ......|+
T Consensus 174 ~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~sk 253 (372)
T 3b6u_A 174 TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGK 253 (372)
T ss_dssp TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEE
T ss_pred CCCceEEECCCCcEecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCCCCCcceEEEE
Confidence 89999999999999999999999999999999999999999999999999987643 23466799
Q ss_pred eeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhccccCC
Q psy5718 182 LYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTSME 250 (720)
Q Consensus 182 L~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iSPs 250 (720)
|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .||||||||||||||| +||+||||+
T Consensus 254 L~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~ 333 (372)
T 3b6u_A 254 LNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPA 333 (372)
T ss_dssp EEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCB
T ss_pred EEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCc
Confidence 99999999999999999999999999999999999999 998876 7999999999999999 999999999
Q ss_pred cccHHHHHhHHHHHHHhccccccchhhhHHH
Q psy5718 251 SSQAEEHKKAIEYEKELGETRLLLQTNERRE 281 (720)
Q Consensus 251 ~~~~~ETlsTL~fa~rak~Ikn~~~vN~~~~ 281 (720)
..+++||++||+||.||++|+|.|.+|.+..
T Consensus 334 ~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~ 364 (372)
T 3b6u_A 334 SYNVEETLTTLRYANRAKNIKNKPRVNEDPK 364 (372)
T ss_dssp GGGHHHHHHHHHHHHHHTTCBCCCCCCC---
T ss_pred ccCHHHHHHHHHHHHHHhhccccceecCChH
Confidence 9999999999999999999999999999654
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-61 Score=526.99 Aligned_cols=271 Identities=23% Similarity=0.270 Sum_probs=192.3
Q ss_pred CCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-----CCeeeecceecCCCCChHHHHHHhhhhcceeee
Q psy5718 11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-----GGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQF 85 (720)
Q Consensus 11 ~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-----~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl 85 (720)
.+..++|+|+|||||+++.|...+...|+...++.. ..+.. ..+.|.||+||+++++|++||+.++.|+|+++|
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~-~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l 95 (388)
T 3bfn_A 17 QGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCS-LEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLL 95 (388)
T ss_dssp SSCCCCCEEEEEECCCC------------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHHT
T ss_pred cCCCCCEEEEEECCCCChhhhccCCCceEEecCCCe-EEEecCCCCCCeeEEEcceEecCCCCHhHHHHHHHHHHHHHhh
Confidence 456789999999999999987766666665443331 11111 236899999999999999999999999999999
Q ss_pred cC---------------------CCCceeehhhhhhhhhhhhhhcc---cccceeE------------------------
Q psy5718 86 VD---------------------ADQYMVSVDRLRSDHQLKASTMC---EHSLMHL------------------------ 117 (720)
Q Consensus 86 ~G---------------------~~~~~GIIpRav~~LF~~i~~~~---~~~~~~v------------------------ 117 (720)
+| ++..+|||||++.+||..+.... ..+.|.+
T Consensus 96 ~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l~ 175 (388)
T 3bfn_A 96 EGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLV 175 (388)
T ss_dssp TTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBCC
T ss_pred cCceeeEeeecCCCCCCCeEeecCccccchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCCCCce
Confidence 99 56789999999999999987532 2223322
Q ss_pred --------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCC-cccccceeeeeecc
Q psy5718 118 --------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLEN-EKKLSGKLYLVDLA 188 (720)
Q Consensus 118 --------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~-~~~~~skL~lVDLA 188 (720)
+||+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+... .....|+|+|||||
T Consensus 176 ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~skL~lVDLA 255 (388)
T 3bfn_A 176 IREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLA 255 (388)
T ss_dssp CEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEEEEEEEEEECC
T ss_pred EEEcCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCCCceeEEEEEEEECC
Confidence 899999999999999999999999999999999999999999999999999876543 34578999999999
Q ss_pred CCcccccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHHHHH
Q psy5718 189 GSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAEEHK 258 (720)
Q Consensus 189 GSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETl 258 (720)
||||..++++.|.+++|+.+||+||++||+| +|+++..||||||||||||||| +||+||||+..+++||+
T Consensus 256 GSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETl 335 (388)
T 3bfn_A 256 GSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTV 335 (388)
T ss_dssp CTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHH
T ss_pred CCcccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHH
Confidence 9999999999999999999999999999999 9999999999999999999999 89999999999999999
Q ss_pred hHHHHHHHhccccccchhhhHHHH
Q psy5718 259 KAIEYEKELGETRLLLQTNERREQ 282 (720)
Q Consensus 259 sTL~fa~rak~Ikn~~~vN~~~~~ 282 (720)
+||+||+||+.|+|.|.+|+....
T Consensus 336 sTLrfA~rak~I~n~p~~n~~~~~ 359 (388)
T 3bfn_A 336 SALNFAARSKEVINRPFTNESLQP 359 (388)
T ss_dssp HHHHHHCSEEEEC-----------
T ss_pred HHHHHHHHHhhCcCcCcccCCCCH
Confidence 999999999999999999995543
No 8
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=1.7e-61 Score=525.77 Aligned_cols=268 Identities=29% Similarity=0.338 Sum_probs=215.5
Q ss_pred CCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------CCeeeecceecCCCCChHHHHHHhhhhccee
Q psy5718 11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------GGKFYLFDKVFKPNATQEKVYDEAAKSIVSV 83 (720)
Q Consensus 11 ~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------~~k~F~FD~VF~~~asQeeVY~~~~~plV~~ 83 (720)
....++|+|+|||||+++.|...+...++.+++......+.. ..+.|.||+||+++++|++||+.++.|+|++
T Consensus 4 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~ 83 (359)
T 1x88_A 4 EEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDE 83 (359)
T ss_dssp -----CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEEeCCCChhhhhcCCceEEEEcCCCcEEEEeCCCccCCcCceEEeceEEEeccCchhHHHHHHHHHhHHH
Confidence 355689999999999999998888888888776653333322 2478999999999999999999999999999
Q ss_pred eecC---------------------CC-----------CceeehhhhhhhhhhhhhhcccccceeE--------------
Q psy5718 84 QFVD---------------------AD-----------QYMVSVDRLRSDHQLKASTMCEHSLMHL-------------- 117 (720)
Q Consensus 84 vl~G---------------------~~-----------~~~GIIpRav~~LF~~i~~~~~~~~~~v-------------- 117 (720)
+|+| +. ..+|||||++.+||..+......+.+.+
T Consensus 84 ~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL 163 (359)
T 1x88_A 84 VIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLL 163 (359)
T ss_dssp HHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETT
T ss_pred HhCCCceEEEEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhccCceEEEEEEEEEEeCceeeehh
Confidence 9999 11 1369999999999998865322111111
Q ss_pred ---------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC---
Q psy5718 118 ---------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE--- 173 (720)
Q Consensus 118 ---------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~--- 173 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+....
T Consensus 164 ~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~ 243 (359)
T 1x88_A 164 NPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDG 243 (359)
T ss_dssp CTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTS
T ss_pred cccccccccceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccCCC
Confidence 78999999999999999999999999999999999999999999999999876542
Q ss_pred CcccccceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hh
Q psy5718 174 NEKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LV 243 (720)
Q Consensus 174 ~~~~~~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~m 243 (720)
......|+|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++..||||||||||||||| +|
T Consensus 244 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~m 323 (359)
T 1x88_A 244 EELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSI 323 (359)
T ss_dssp CEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEEEE
T ss_pred CceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhcCCCCCccccchHHHHHHHHhCCCCeEEE
Confidence 2235679999999999999999999999999999999999999999 9999999999999999999999 89
Q ss_pred hccccCCcccHHHHHhHHHHHHHhccccccchhhh
Q psy5718 244 ARCTSMESSQAEEHKKAIEYEKELGETRLLLQTNE 278 (720)
Q Consensus 244 I~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~~vN~ 278 (720)
|+||||+..+++||++||+||+|||+|+|.|.+|+
T Consensus 324 Ia~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 324 IATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp EEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred EEEECCCcccHHHHHHHHHHHHHHhhccCcceeCC
Confidence 99999999999999999999999999999999996
No 9
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.7e-61 Score=520.17 Aligned_cols=264 Identities=28% Similarity=0.354 Sum_probs=223.8
Q ss_pred CCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceee--eCCeeeecceecCCCCChHHHHHHhhhhcceeeecC---
Q psy5718 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLS--LGGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD--- 87 (720)
Q Consensus 13 ~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~--~~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G--- 87 (720)
..++|+|+|||||+++.|...+...++.+..++. .+. .+.+.|.||+||+++++|++||+.++.|+|+++|+|
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~--~i~~~~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~ 79 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNN--VIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNG 79 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETT--EEEETTSSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCE
T ss_pred CCCCEEEEEECCCCChhhhccCCCcEEEEeCCCC--eEEECCCCeEEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 4689999999999999997766655554443331 232 245899999999999999999999999999999999
Q ss_pred ------------------CCCceeehhhhhhhhhhhhhhcccccceeE--------------------------------
Q psy5718 88 ------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL-------------------------------- 117 (720)
Q Consensus 88 ------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v-------------------------------- 117 (720)
++..+|||||++.+||..+..... ..|.+
T Consensus 80 tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~-~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~ 158 (349)
T 1t5c_A 80 TIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVN 158 (349)
T ss_dssp EEEEEESTTSSHHHHHTBCSSSBCHHHHHHHHHHHHGGGCTT-EEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTT
T ss_pred ceeeecCCCCCCCeEEecCCCCCchHHHHHHHHHHHHHhCcC-CcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECCC
Confidence 567899999999999999875321 12211
Q ss_pred --EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCC-----cccccceeeeeeccCC
Q psy5718 118 --IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLEN-----EKKLSGKLYLVDLAGS 190 (720)
Q Consensus 118 --~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~-----~~~~~skL~lVDLAGS 190 (720)
+||+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+... +....|+|+|||||||
T Consensus 159 ~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGS 238 (349)
T 1t5c_A 159 RNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGS 238 (349)
T ss_dssp TEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCG
T ss_pred CCEEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCC
Confidence 899999999999999999999999999999999999999999999999999876543 2456799999999999
Q ss_pred cccccCCCcccchHHhhhhccCCccccCc--ccccCC--cccccccchhhhhhhh--------hhhccccCCcccHHHHH
Q psy5718 191 EKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF--TVARLYISKMKSEVKN--------LVARCTSMESSQAEEHK 258 (720)
Q Consensus 191 Er~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~--~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETl 258 (720)
||++++++.|.+++|+.+||+||++||+| +|+++. .||||||||||||||| +||+||||+ +++||+
T Consensus 239 Er~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETl 316 (349)
T 1t5c_A 239 ERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETL 316 (349)
T ss_dssp GGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHH
T ss_pred ccccccCCccccchhhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHH
Confidence 99999999999999999999999999999 998875 6999999999999999 899999997 589999
Q ss_pred hHHHHHHHhccccccchhhhHHH
Q psy5718 259 KAIEYEKELGETRLLLQTNERRE 281 (720)
Q Consensus 259 sTL~fa~rak~Ikn~~~vN~~~~ 281 (720)
+||+||+|||.|+|.|.+|+...
T Consensus 317 sTL~fA~rak~I~n~~~vn~~~~ 339 (349)
T 1t5c_A 317 TALQFASTAKYMKNTPYVNEVST 339 (349)
T ss_dssp HHHHHHHHHTTCCCCCCCCEEC-
T ss_pred HHHHHHHHHhhcccCceeccCCC
Confidence 99999999999999999998443
No 10
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=4.9e-61 Score=524.27 Aligned_cols=267 Identities=29% Similarity=0.344 Sum_probs=218.0
Q ss_pred CCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------CCeeeecceecCCCCChHHHHHHhhhhcce
Q psy5718 10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------GGKFYLFDKVFKPNATQEKVYDEAAKSIVS 82 (720)
Q Consensus 10 ~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------~~k~F~FD~VF~~~asQeeVY~~~~~plV~ 82 (720)
.....++|+|+|||||+++.|...+...++.++++. .+.+ ..+.|.||+||+++++|++||+.++.|+|+
T Consensus 18 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~ 94 (373)
T 2wbe_C 18 QKKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPR---EVVTRHTLDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIE 94 (373)
T ss_dssp CCCCCEECEEEEEECCCCHHHHHHTCCBCEEEETTT---EEEESSSSSSTTCEEEECSEEECTTCCHHHHHHHHHHHHHH
T ss_pred CcCCCCCeEEEEEcCCCChhhhccCCCceEEEcCCC---eEEEecCCCCCCceEEeccEEeccccchhHHHHHHHHHHHH
Confidence 445678999999999999999877777788877665 3332 147899999999999999999999999999
Q ss_pred eeecC---------------------C-----------CCceeehhhhhhhhhhhhhhcccccceeE-------------
Q psy5718 83 VQFVD---------------------A-----------DQYMVSVDRLRSDHQLKASTMCEHSLMHL------------- 117 (720)
Q Consensus 83 ~vl~G---------------------~-----------~~~~GIIpRav~~LF~~i~~~~~~~~~~v------------- 117 (720)
++|+| + ...+|||||++.+||..+......+.+.+
T Consensus 95 ~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DL 174 (373)
T 2wbe_C 95 EVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDL 174 (373)
T ss_dssp HHHHTCCEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEETTEEEES
T ss_pred HHhCCceEEEEeecCCCCCcceecccCccccccccccccCCCcChHHHHHHHHHHHHhcCceEEEEEEEEEEeCCeEEEC
Confidence 99999 1 13689999999999998865432222211
Q ss_pred --------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC---C
Q psy5718 118 --------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE---N 174 (720)
Q Consensus 118 --------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~---~ 174 (720)
++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.... .
T Consensus 175 L~~~~~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~ 254 (373)
T 2wbe_C 175 LSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGE 254 (373)
T ss_dssp SCTTSCSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTC
T ss_pred CCCCCCCCceeEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCCCCC
Confidence 78999999999999999999999999999999999999999999999999876532 2
Q ss_pred cccccceeeeeeccCCcccccCCCc-ccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hh
Q psy5718 175 EKKLSGKLYLVDLAGSEKVSKTGAE-GTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LV 243 (720)
Q Consensus 175 ~~~~~skL~lVDLAGSEr~~kt~~~-g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~m 243 (720)
.....|+|+|||||||||++++++. |.+++|+.+||+||++||+| +|+++..||||||||||||||| +|
T Consensus 255 ~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~m 334 (373)
T 2wbe_C 255 DMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSI 334 (373)
T ss_dssp CEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHHHSSSEEEE
T ss_pred cceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHHHHcCCCcCccccchHHHHHHHHhCCCceEEE
Confidence 2356799999999999999999987 99999999999999999999 9999999999999999999999 89
Q ss_pred hccccCCcccHHHHHhHHHHHHHhccccccchhhhH
Q psy5718 244 ARCTSMESSQAEEHKKAIEYEKELGETRLLLQTNER 279 (720)
Q Consensus 244 I~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~~vN~~ 279 (720)
|+||||+..+++||++||+||+|||+|+|.|.+|..
T Consensus 335 Ia~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~ 370 (373)
T 2wbe_C 335 IATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQK 370 (373)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEE
T ss_pred EEEeCCCcccHHHHHHHHHHHHHHhhccccceeccc
Confidence 999999999999999999999999999999999973
No 11
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=5.3e-60 Score=513.31 Aligned_cols=256 Identities=27% Similarity=0.337 Sum_probs=198.9
Q ss_pred CCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------------------------CCeeeecceecCCC
Q psy5718 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------------------------GGKFYLFDKVFKPN 66 (720)
Q Consensus 12 ~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------------------------~~k~F~FD~VF~~~ 66 (720)
...++|+|+|||||+++.|...+...++.+.++. ++.+ ..+.|.||+||+++
T Consensus 7 d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~ 83 (355)
T 3lre_A 7 DLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKH---ILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDET 83 (355)
T ss_dssp -----CEEEEEECCCCHHHHHTTCCBSEEECSSS---EEEEC------------------------CCEEEECSEEECTT
T ss_pred hccCCCEEEEEeCcCChHHHhcCCceEEEecCCc---eEEecCCCCcceeecccccccccchhccCCCceEEeceEECCC
Confidence 4468999999999999999888887777765443 1111 23579999999999
Q ss_pred CChHHHHHHhhhhcceeeecC---------------------CCCceeehhhhhhhhhhhhhhcccccceeE--------
Q psy5718 67 ATQEKVYDEAAKSIVSVQFVD---------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL-------- 117 (720)
Q Consensus 67 asQeeVY~~~~~plV~~vl~G---------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v-------- 117 (720)
++|++||+.++.|+|+++|+| ++..+|||||++.+||..+........|.+
T Consensus 84 ~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIY 163 (355)
T 3lre_A 84 STQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVY 163 (355)
T ss_dssp CCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEE
T ss_pred CChHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCceeeeccCCCCCCeeehhhhHHHHhhhhhccCceEEEEEEEEEEE
Confidence 999999999999999999999 567899999999999999987654433332
Q ss_pred -----------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCC
Q psy5718 118 -----------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLEN 174 (720)
Q Consensus 118 -----------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~ 174 (720)
++|+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+...
T Consensus 164 nE~i~DLL~~~~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~ 243 (355)
T 3lre_A 164 NEQIRDLLVNSGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTA 243 (355)
T ss_dssp TTEEEESSSCCCCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTS
T ss_pred CCEEEECcCCCCCceeEEcCCCCEEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCC
Confidence 899999999999999999999999999999999999999999999999999977543
Q ss_pred ---cccccceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC---cccccccchhhhhhhh-----
Q psy5718 175 ---EKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF---TVARLYISKMKSEVKN----- 241 (720)
Q Consensus 175 ---~~~~~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~---~hIPYRdSKLTrLLqd----- 241 (720)
.....|+|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .|||||||||||||||
T Consensus 244 ~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGn 323 (355)
T 3lre_A 244 SINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGN 323 (355)
T ss_dssp CTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTT
T ss_pred CCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCC
Confidence 345679999999999999999999999999999999999999999 998764 6999999999999999
Q ss_pred ---hhhccccCCcccHHHHHhHHHHHHHhccc
Q psy5718 242 ---LVARCTSMESSQAEEHKKAIEYEKELGET 270 (720)
Q Consensus 242 ---~mI~~iSPs~~~~~ETlsTL~fa~rak~I 270 (720)
+||+||||+..+++||++||+||+|||+|
T Consensus 324 skt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 324 CQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp SEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred ceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999986
No 12
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=5.1e-60 Score=525.92 Aligned_cols=265 Identities=29% Similarity=0.352 Sum_probs=215.8
Q ss_pred CCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceee------------------eCCeeeecceecCC-------C
Q psy5718 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLS------------------LGGKFYLFDKVFKP-------N 66 (720)
Q Consensus 12 ~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~------------------~~~k~F~FD~VF~~-------~ 66 (720)
...++|+|+|||||+++.|...+...++.+++.....++. ...+.|.||+|||+ .
T Consensus 35 ~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~ 114 (443)
T 2owm_A 35 DPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHY 114 (443)
T ss_dssp CCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTC
T ss_pred CCCCCeEEEEEeCCCChHHhhcCCceEEEEcCCCccEEEecCCCcccccccccccccccCCceEecCeEeCCCCcCCccC
Confidence 4567999999999999999888887778776654222221 12578999999986 4
Q ss_pred CChHHHHHHhhhhcceeeecC---------------------CCCceeehhhhhhhhhhhhhhcc---cccceeE-----
Q psy5718 67 ATQEKVYDEAAKSIVSVQFVD---------------------ADQYMVSVDRLRSDHQLKASTMC---EHSLMHL----- 117 (720)
Q Consensus 67 asQeeVY~~~~~plV~~vl~G---------------------~~~~~GIIpRav~~LF~~i~~~~---~~~~~~v----- 117 (720)
++|++||+.++.|+|+++|+| ++..+|||||++.+||..+.... ..+.|.+
T Consensus 115 asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~l 194 (443)
T 2owm_A 115 ATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYF 194 (443)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEE
T ss_pred CCHHHHHHhhhhhHHHHhhcCCceEEEEeCCCCCCCCEEeecCCCCCchHHHHHHHHHHHHHhhhcccCCceEEEEEEEE
Confidence 899999999999999999999 56789999999999999987642 2223322
Q ss_pred --------------------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEE
Q psy5718 118 --------------------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLI 165 (720)
Q Consensus 118 --------------------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI 165 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|
T Consensus 195 EIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti 274 (443)
T 2owm_A 195 EVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTI 274 (443)
T ss_dssp EEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEE
T ss_pred EEECCEeeEccCccccCCcccccceeECCCCCEeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEE
Confidence 789999999999999999999999999999999999999999999999
Q ss_pred EEEeeecC----CcccccceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC--------------
Q psy5718 166 NVKQENLE----NEKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-------------- 225 (720)
Q Consensus 166 ~v~q~~~~----~~~~~~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-------------- 225 (720)
+|.+.... ......|+|+|||||||||+.++++.|.+++|+.+||+||++||+| +|+++.
T Consensus 275 ~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~ 354 (443)
T 2owm_A 275 MLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGR 354 (443)
T ss_dssp EEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC----------------
T ss_pred EEEEeecccCCCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHHHHHHHHhccccccccccccccccc
Confidence 99986532 2345679999999999999999999999999999999999999999 998743
Q ss_pred --------cccccccchhhhhhhh--------hhhccccCCcccHHHHHhHHHHHHHhccccccchhhh
Q psy5718 226 --------TVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAIEYEKELGETRLLLQTNE 278 (720)
Q Consensus 226 --------~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~~vN~ 278 (720)
.||||||||||||||| +||+||||+ +++||++||+||.|||+|+|.|.+|.
T Consensus 355 ~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 355 GRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp ---------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCC
T ss_pred ccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhccccceecc
Confidence 3899999999999999 899999997 59999999999999999999999998
No 13
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-59 Score=505.64 Aligned_cols=258 Identities=29% Similarity=0.404 Sum_probs=218.5
Q ss_pred CCCCEEEEEeeCCCCchhhccC-CceEEEecCCCccceeee--C--CeeeecceecCCCCChHHHHHHhhhhcceeeecC
Q psy5718 13 AEDSIRVVCRFRPLNHSEEKAG-SKFIVKFPSGGEENGLSL--G--GKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD 87 (720)
Q Consensus 13 ~~~~IrV~vRVRPl~~~E~~~g-~~~iv~~~~~~~~~~v~~--~--~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G 87 (720)
.+++|+|+|||||+++.|...+ ...++.++..+.. .+.+ . .+.|.||+||+++++|++||+.+ .|+|+++|+|
T Consensus 2 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G 79 (330)
T 2h58_A 2 SKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDS-IIHLLHKGKPVSFELDKVFSPQASQQDVFQEV-QALVTSCIDG 79 (330)
T ss_dssp ---CEEEEEEECCCCGGGCSSGGGSBCEEECSSCTT-EEEEEETTEEEEEECSEEECTTCCHHHHHTTT-HHHHHHHHTT
T ss_pred CCCCEEEEEEcCCCChhhcccCCCccEEEEeCCCCc-EEEEcCCCCeeEEecCeEeCCCCCcHhHHHHH-HHHHHHHhCC
Confidence 3689999999999999886432 3345666544322 2222 2 36899999999999999999985 8999999999
Q ss_pred ---------------------CCCceeehhhhhhhhhhhhhhcccccceeE-----------------------------
Q psy5718 88 ---------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL----------------------------- 117 (720)
Q Consensus 88 ---------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v----------------------------- 117 (720)
++..+|||||++.+||..+........|.+
T Consensus 80 ~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~ 159 (330)
T 2h58_A 80 FNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLC 159 (330)
T ss_dssp CCEEEEEESSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEEC
T ss_pred CEEEEEeECCCCCCCcEEEecCCCCCcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhcccccccccceEEEe
Confidence 567899999999999999976544433333
Q ss_pred ------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeeeeccCCc
Q psy5718 118 ------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLVDLAGSE 191 (720)
Q Consensus 118 ------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lVDLAGSE 191 (720)
++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....|+|+||||||||
T Consensus 160 ~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSE 239 (330)
T 2h58_A 160 PDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSE 239 (330)
T ss_dssp TTSSCCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETTTTEEEEEEEEEEECCCCC
T ss_pred ecCCCCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecCCCcEEEEEEEEEeCCCCC
Confidence 78999999999999999999999999999999999999999999999999998887777889999999999999
Q ss_pred ccccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHHHHHhHH
Q psy5718 192 KVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAI 261 (720)
Q Consensus 192 r~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL 261 (720)
|++++++.|.+++|+.+||+||++||+| ||+.+..||||||||||||||| +||+||||+..+++||++||
T Consensus 240 r~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL 319 (330)
T 2h58_A 240 RVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSL 319 (330)
T ss_dssp CCC------HHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHH
T ss_pred cccccCCchhhhHHHHHhhHhHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHH
Confidence 9999999999999999999999999999 9999889999999999999999 99999999999999999999
Q ss_pred HHHHHhccccc
Q psy5718 262 EYEKELGETRL 272 (720)
Q Consensus 262 ~fa~rak~Ikn 272 (720)
+||+|||+|+.
T Consensus 320 ~fA~rak~i~~ 330 (330)
T 2h58_A 320 KFAERVRSVEL 330 (330)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHhhCcC
Confidence 99999999863
No 14
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=1.3e-59 Score=508.79 Aligned_cols=257 Identities=30% Similarity=0.355 Sum_probs=205.1
Q ss_pred cCCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-CCeeeecceecCCCCChHHHHHHhhhhcceeeecC
Q psy5718 9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-GGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD 87 (720)
Q Consensus 9 ~~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G 87 (720)
.+++.+++|+|+|||||+++.|...+...|+.+.++. ..+.+ ..+.|.||+||+++++|++||+.++.|+|+++|+|
T Consensus 5 ~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~--~~~~~~~~~~f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G 82 (344)
T 4a14_A 5 LPGAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGL--GRVTLGRDRHFGFHVVLAEDAGQEAVYQACVQPLLEAFFEG 82 (344)
T ss_dssp ----CCCCCEEEEEECCCCHHHHHTTCCBCEEEEGGG--TEEEETTTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTT
T ss_pred CCCccccceEEEEEecccchHHHhccCeeEEEEcCCC--ceEEecccceEEEEEEEecCcchhHHHHHHHHHHHHHHHhh
Confidence 4566789999999999999999888888888776554 23444 46899999999999999999999999999999999
Q ss_pred ---------------------C------CCceeehhhhhhhhhhhhhhcccccceeE-----------------------
Q psy5718 88 ---------------------A------DQYMVSVDRLRSDHQLKASTMCEHSLMHL----------------------- 117 (720)
Q Consensus 88 ---------------------~------~~~~GIIpRav~~LF~~i~~~~~~~~~~v----------------------- 117 (720)
. ...+|||||++.+||..+.... ...|.+
T Consensus 83 ~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~~-~~~~~v~vS~~EIYnE~i~DLL~~~~~~~ 161 (344)
T 4a14_A 83 FNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDEND-LLDCLVHVSYLEVYKEEFRDLLEVGTASR 161 (344)
T ss_dssp CCEEEEEESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHCT-TSEEEEEEEEEEEETTEEEETTSSCCCGG
T ss_pred cCeeEEEecccCCCceEeecccchhhhhhcccCCchHHHHHHHHhccccc-ceeeEEEEehhhhhHHHHHHHHHhccccc
Confidence 1 3678999999999999987642 222222
Q ss_pred -----------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC--------Ccccc
Q psy5718 118 -----------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE--------NEKKL 178 (720)
Q Consensus 118 -----------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~--------~~~~~ 178 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+.. .+...
T Consensus 162 ~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~ 241 (344)
T 4a14_A 162 DIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLL 241 (344)
T ss_dssp GCEEEECTTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEE
T ss_pred cceeeeccCCCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCcccccee
Confidence 89999999999999999999999999999999999999999999999999987542 23456
Q ss_pred cceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC---cccccccchhhhhhhh--------hhhc
Q psy5718 179 SGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF---TVARLYISKMKSEVKN--------LVAR 245 (720)
Q Consensus 179 ~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~---~hIPYRdSKLTrLLqd--------~mI~ 245 (720)
.|+|+|||||||||+.++++.|.+++|+.+||+||++||+| +|+++. .||||||||||||||| +||+
T Consensus 242 ~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~ 321 (344)
T 4a14_A 242 VSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIA 321 (344)
T ss_dssp EEEEEEEECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEE
T ss_pred eeeeeEEecccchhhcccCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEE
Confidence 79999999999999999999999999999999999999999 998754 6999999999999999 8999
Q ss_pred cccCCcccHHHHHhHHHHHHHhc
Q psy5718 246 CTSMESSQAEEHKKAIEYEKELG 268 (720)
Q Consensus 246 ~iSPs~~~~~ETlsTL~fa~rak 268 (720)
||||+..+++||++||+||+|||
T Consensus 322 ~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 322 CVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp EECCBGGGHHHHHHHHHHHHHTC
T ss_pred EeCCCccchhHHhhhhhhhhhcC
Confidence 99999999999999999999996
No 15
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=6.3e-60 Score=514.62 Aligned_cols=262 Identities=27% Similarity=0.345 Sum_probs=214.7
Q ss_pred CCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------CCeeeecceecCCC--------CChHHHHHHhhh
Q psy5718 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------GGKFYLFDKVFKPN--------ATQEKVYDEAAK 78 (720)
Q Consensus 14 ~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------~~k~F~FD~VF~~~--------asQeeVY~~~~~ 78 (720)
.++|+|+|||||+++.|...+...++.++++. ++.. ..+.|.||+|||+. ++|++||+.++.
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~---~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~ 79 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGST---TTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGE 79 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTE---EEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHH
T ss_pred CCCcEEEEECCCCChhhccCCCCeEEEECCCc---EEEeccCCCCCCceEEecceEeecCccccccccCcHHHHHHHHHH
Confidence 46899999999999999888888888777654 2222 24789999999987 899999999999
Q ss_pred hcceeeecC---------------------C--CCceeehhhhhhhhhhhhhhcc-cccceeE-----------------
Q psy5718 79 SIVSVQFVD---------------------A--DQYMVSVDRLRSDHQLKASTMC-EHSLMHL----------------- 117 (720)
Q Consensus 79 plV~~vl~G---------------------~--~~~~GIIpRav~~LF~~i~~~~-~~~~~~v----------------- 117 (720)
|+|+++|+| + ...+|||||++.+||..+.... ....|.+
T Consensus 80 plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~ 159 (366)
T 2zfi_A 80 EMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLN 159 (366)
T ss_dssp HHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTC
T ss_pred HHHHHHhcCCeeEEEEeCCCCCCCceEeeCCCccCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccc
Confidence 999999999 1 3468999999999999987643 2223322
Q ss_pred ----------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCc----cc
Q psy5718 118 ----------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENE----KK 177 (720)
Q Consensus 118 ----------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~----~~ 177 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+...... ..
T Consensus 160 ~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~ 239 (366)
T 2zfi_A 160 PKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTE 239 (366)
T ss_dssp TTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEE
T ss_pred cccCCCceEEEcCCCCEEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccce
Confidence 7999999999999999999999999999999999999999999999999998765432 34
Q ss_pred ccceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccC------------Ccccccccchhhhhhhh--
Q psy5718 178 LSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEE------------FTVARLYISKMKSEVKN-- 241 (720)
Q Consensus 178 ~~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~------------~~hIPYRdSKLTrLLqd-- 241 (720)
..|+|+|||||||||++++++.|.+++|+.+||+||++||+| +|+++ ..|||||||||||||||
T Consensus 240 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsL 319 (366)
T 2zfi_A 240 KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENL 319 (366)
T ss_dssp EEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGS
T ss_pred eEeEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHh
Confidence 579999999999999999999999999999999999999999 88763 37999999999999999
Q ss_pred ------hhhccccCCcccHHHHHhHHHHHHHhccccccchhhh
Q psy5718 242 ------LVARCTSMESSQAEEHKKAIEYEKELGETRLLLQTNE 278 (720)
Q Consensus 242 ------~mI~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~~vN~ 278 (720)
+||+||||+..+++||++||+||+|||+|+|.|.++.
T Consensus 320 gGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 320 GGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp STTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC----------
T ss_pred CCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 8999999999999999999999999999999998875
No 16
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=1.2e-58 Score=501.95 Aligned_cols=261 Identities=25% Similarity=0.334 Sum_probs=206.4
Q ss_pred CCCCEEEEEeeCCCCchhhccCCceEEEecCCC-ccceeee--C-----CeeeecceecCCCCChHHHHHHhhhhcceee
Q psy5718 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-EENGLSL--G-----GKFYLFDKVFKPNATQEKVYDEAAKSIVSVQ 84 (720)
Q Consensus 13 ~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~-~~~~v~~--~-----~k~F~FD~VF~~~asQeeVY~~~~~plV~~v 84 (720)
.+|+|||||||||+++.|...+...++...++. ....+.+ . .+.|.||+||+++++|++||+.+ .|+|+++
T Consensus 3 lkgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~v-~~lv~~~ 81 (349)
T 3t0q_A 3 LRGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNEGRILSYNFQFDMIFEPSHTNKEIFEEI-RQLVQSS 81 (349)
T ss_dssp --CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC--CEEEEEEESEEECTTCCHHHHHHHH-HHHHHGG
T ss_pred CCCCcEEEEEeCCCCccccccCceEEEeeccCCCCceEEEEcCCCCcccceeeecCEEECCCccHHHHHHHH-HHHHHHH
Confidence 468999999999999998777666655543322 1122222 1 36899999999999999999986 6999999
Q ss_pred ecC-------------------CCCceeehhhhhhhhhhhhhhccc-ccceeE---------------------------
Q psy5718 85 FVD-------------------ADQYMVSVDRLRSDHQLKASTMCE-HSLMHL--------------------------- 117 (720)
Q Consensus 85 l~G-------------------~~~~~GIIpRav~~LF~~i~~~~~-~~~~~v--------------------------- 117 (720)
|+| .+..+|||||++.+||..+..... .+.|.+
T Consensus 82 l~G~n~tifAYGqTGSGKTyTm~g~~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~ 161 (349)
T 3t0q_A 82 LDGYNVCIFAYGQTGSGKTYTMLNAGDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDE 161 (349)
T ss_dssp GTTCEEEEEEECSTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC----------
T ss_pred HCCcceeEEEeCCCCCCCceEeCCCCCchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhcccccccccccccc
Confidence 999 234579999999999998865322 112211
Q ss_pred -----------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccc
Q psy5718 118 -----------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSG 180 (720)
Q Consensus 118 -----------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~s 180 (720)
+||+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....|
T Consensus 162 ~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~ 241 (349)
T 3t0q_A 162 ILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTGETSQG 241 (349)
T ss_dssp -----CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETTTCCEEEE
T ss_pred ccccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecCCCCeeEE
Confidence 789999999999999999999999999999999999999999999999999998888888899
Q ss_pred eeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC---cccccccchhhhhhhh--------hhhccc
Q psy5718 181 KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF---TVARLYISKMKSEVKN--------LVARCT 247 (720)
Q Consensus 181 kL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~---~hIPYRdSKLTrLLqd--------~mI~~i 247 (720)
+|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .||||||||||||||| +||+||
T Consensus 242 kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~v 321 (349)
T 3t0q_A 242 KLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNI 321 (349)
T ss_dssp EEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEE
T ss_pred EEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEe
Confidence 999999999999999999999999999999999999999 998765 5999999999999999 899999
Q ss_pred cCCcccHHHHHhHHHHHHHhccccccc
Q psy5718 248 SMESSQAEEHKKAIEYEKELGETRLLL 274 (720)
Q Consensus 248 SPs~~~~~ETlsTL~fa~rak~Ikn~~ 274 (720)
||+..+++||++||+||+|++.|+..+
T Consensus 322 sP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 322 PPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred CCchhhHHHHHHHHHHHHHhhhcccCC
Confidence 999999999999999999999998654
No 17
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=5.3e-59 Score=502.99 Aligned_cols=261 Identities=23% Similarity=0.294 Sum_probs=202.0
Q ss_pred CcCCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeeeCCeeeecceecCCCCChHHHHHHhhhhcceeeecC
Q psy5718 8 DREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGGKFYLFDKVFKPNATQEKVYDEAAKSIVSVQFVD 87 (720)
Q Consensus 8 ~~~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~~~k~F~FD~VF~~~asQeeVY~~~~~plV~~vl~G 87 (720)
+|+.+..++|+|+|||||+++.+ ..+...++.+++......+.++++.|.||+||+++++|++||+.++.|+|+++|+|
T Consensus 15 ~m~~~~~~~VrV~vRvRP~~~~e-~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G 93 (344)
T 3dc4_A 15 GMEGAKLSAVRIAVREAPYRQFL-GRREPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEG 93 (344)
T ss_dssp ----CCCSEEEEEEEECCCC--------CCSEECCSSSCSSEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHT
T ss_pred CCCCCCCCCeEEEEECCCCCccc-ccCCceEEEecCCCCCceEEecCcEEEcceEECCCCCHHHHHHhhccchhhHhhCC
Confidence 56677889999999999999877 34566778887644445788889999999999999999999999999999999999
Q ss_pred ---------------------C------CCceeehhhhhhhhhhhhhhcccc--cceeE---------------------
Q psy5718 88 ---------------------A------DQYMVSVDRLRSDHQLKASTMCEH--SLMHL--------------------- 117 (720)
Q Consensus 88 ---------------------~------~~~~GIIpRav~~LF~~i~~~~~~--~~~~v--------------------- 117 (720)
+ +..+|||||++.+||..+...... ..|.+
T Consensus 94 ~N~tifAYGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~ 173 (344)
T 3dc4_A 94 FQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPH 173 (344)
T ss_dssp CCEEEEEESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTT
T ss_pred CceEEEEecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCC
Confidence 1 356799999999999999765432 12222
Q ss_pred -----EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeeeeccCCcc
Q psy5718 118 -----IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLVDLAGSEK 192 (720)
Q Consensus 118 -----~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lVDLAGSEr 192 (720)
..+.|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+. ...|+|+|||||||||
T Consensus 174 ~~~~~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~------~~~skl~lVDLAGSEr 247 (344)
T 3dc4_A 174 MPMVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK------THHSRMNIVDLAGSEG 247 (344)
T ss_dssp SBCCSSTTTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECS------SCEEEEEEEECCCCCC
T ss_pred CccccccccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec------CcEEEEEEEECCCCcc
Confidence 23568999999999999999999999999999999999999999999999763 3579999999999999
Q ss_pred cccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHHHHHhHHH
Q psy5718 193 VSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAIE 262 (720)
Q Consensus 193 ~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL~ 262 (720)
+.++++.|.+++|+.+||+||++||+| +|+.+..||||||||||||||| +||+||||+..+++||++||+
T Consensus 248 ~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~ 327 (344)
T 3dc4_A 248 VRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLR 327 (344)
T ss_dssp C-------------CCSCCHHHHHHHHHHHHHTTCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHH
T ss_pred ccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999 899999999999999999999
Q ss_pred HHHHhccccccch
Q psy5718 263 YEKELGETRLLLQ 275 (720)
Q Consensus 263 fa~rak~Ikn~~~ 275 (720)
||+||+..+..|.
T Consensus 328 fA~ra~~~~~~~~ 340 (344)
T 3dc4_A 328 FGTSAKAAALEHH 340 (344)
T ss_dssp HHHHHHHHTTTC-
T ss_pred HHHHHhhcCCCCC
Confidence 9999999876653
No 18
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=7.9e-59 Score=504.43 Aligned_cols=257 Identities=22% Similarity=0.254 Sum_probs=221.4
Q ss_pred CEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------------CCeeeecceecCCCCChHHHHHHhhhhcce
Q psy5718 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------------GGKFYLFDKVFKPNATQEKVYDEAAKSIVS 82 (720)
Q Consensus 16 ~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------------~~k~F~FD~VF~~~asQeeVY~~~~~plV~ 82 (720)
+|+|+|||||+++.|...+...++.++++. ++.+ ..+.|.||+||+++++|++||+.++.|+|.
T Consensus 1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~~~---~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~ 77 (360)
T 1ry6_A 1 MIKVVVRKRPLSELEKKKKDSDIITVKNNC---TLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLII 77 (360)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEEETT---EEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHH
T ss_pred CeEEEEECCCCChHHhccCCceEEEECCCC---EEEEeCCccccccccccccceEEeeeEecCCCCHHHHHHHHhhhhhh
Confidence 599999999999999888877788776654 3332 236899999999999999999999999999
Q ss_pred eeec-C---------------------C-----CCceeehhhhhhhhhhhhhhcccccceeE------------------
Q psy5718 83 VQFV-D---------------------A-----DQYMVSVDRLRSDHQLKASTMCEHSLMHL------------------ 117 (720)
Q Consensus 83 ~vl~-G---------------------~-----~~~~GIIpRav~~LF~~i~~~~~~~~~~v------------------ 117 (720)
++|. | + ...+|||||++.+||..+........+.+
T Consensus 78 ~~~~~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~ 157 (360)
T 1ry6_A 78 DLYENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQK 157 (360)
T ss_dssp HHHHHCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC
T ss_pred hhccCCceeEEEeeCCCCCCCCEEEecCCCCCCccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccC
Confidence 9885 6 1 36799999999999999876544333332
Q ss_pred -------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeee
Q psy5718 118 -------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYL 184 (720)
Q Consensus 118 -------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~l 184 (720)
++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+ .....|+|+|
T Consensus 158 ~~~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~---~~~~~skL~l 234 (360)
T 1ry6_A 158 RKMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN---KNTSLGKIAF 234 (360)
T ss_dssp -----------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT---TTEEEEEEEE
T ss_pred CccceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEecc---CCcceeEEEE
Confidence 789999999999999999999999999999999999999999999999998754 2356799999
Q ss_pred eeccCCcccccCCCcc-cchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCccc
Q psy5718 185 VDLAGSEKVSKTGAEG-TVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQ 253 (720)
Q Consensus 185 VDLAGSEr~~kt~~~g-~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~ 253 (720)
||||||||..++++.| .+++|+.+||+||++||+| ||+.+..||||||||||||||| +||+||||+..+
T Consensus 235 VDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~ 314 (360)
T 1ry6_A 235 IDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISC 314 (360)
T ss_dssp EECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGG
T ss_pred EECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCccc
Confidence 9999999999999876 4688999999999999999 9999889999999999999999 899999999999
Q ss_pred HHHHHhHHHHHHHhccccccchhhh
Q psy5718 254 AEEHKKAIEYEKELGETRLLLQTNE 278 (720)
Q Consensus 254 ~~ETlsTL~fa~rak~Ikn~~~vN~ 278 (720)
++||++||+||+|||+|+|.|..|.
T Consensus 315 ~~ETlsTLrfA~rak~i~n~~~~~~ 339 (360)
T 1ry6_A 315 CEQTLNTLRYSSRVKNKGNSKLEGK 339 (360)
T ss_dssp HHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHhhcccCcccCC
Confidence 9999999999999999999665554
No 19
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=2.7e-58 Score=498.55 Aligned_cols=259 Identities=25% Similarity=0.295 Sum_probs=208.4
Q ss_pred CCCEEEEEeeCCCCc-hhhccCCceEEEecC---CCccceeee-------CCeeeecceecCCCCChHHHHHHhhhhcce
Q psy5718 14 EDSIRVVCRFRPLNH-SEEKAGSKFIVKFPS---GGEENGLSL-------GGKFYLFDKVFKPNATQEKVYDEAAKSIVS 82 (720)
Q Consensus 14 ~~~IrV~vRVRPl~~-~E~~~g~~~iv~~~~---~~~~~~v~~-------~~k~F~FD~VF~~~asQeeVY~~~~~plV~ 82 (720)
+++|+|+|||||+++ .|. ....++.+.. ......+.+ ..+.|.||+||+++++|++||+.+ .|+|+
T Consensus 2 k~nIrV~vRvRP~~~~~e~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~ 78 (347)
T 1f9v_A 2 RGNIRVYCRIRPALKNLEN--SDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEV-GQLVQ 78 (347)
T ss_dssp -CEEEEEEEECCCCTTTCC--CTTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHHH-HHHHG
T ss_pred CCCeEEEEEeCCCCccccc--CCCceEEEecccCCCCceEEEEecCCCCcCceEEeeCEEECCCCCHHHHHHHH-HHHHH
Confidence 578999999999987 332 2333444332 111122322 137899999999999999999986 59999
Q ss_pred eeecC-------------------CCCceeehhhhhhhhhhhhhhccc-ccceeE-------------------------
Q psy5718 83 VQFVD-------------------ADQYMVSVDRLRSDHQLKASTMCE-HSLMHL------------------------- 117 (720)
Q Consensus 83 ~vl~G-------------------~~~~~GIIpRav~~LF~~i~~~~~-~~~~~v------------------------- 117 (720)
++|+| .+..+|||||++.+||..+..... .+.|.+
T Consensus 79 ~~l~G~n~tifAYGqTGSGKTyTM~G~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~ 158 (347)
T 1f9v_A 79 SSLDGYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKED 158 (347)
T ss_dssp GGGGTCCEEEEEECCTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC--------
T ss_pred HhcCCceeEEEEECCCCCCCcEeccCCCCCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccc
Confidence 99999 234679999999999998865321 122211
Q ss_pred -----------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccc
Q psy5718 118 -----------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSG 180 (720)
Q Consensus 118 -----------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~s 180 (720)
++|.|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....|
T Consensus 159 ~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~s 238 (347)
T 1f9v_A 159 TSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKTGAHSYG 238 (347)
T ss_dssp -----CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC--CCEEEE
T ss_pred cccCCceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCCCCceeee
Confidence 689999999999999999999999999999999999999999999999999988777777889
Q ss_pred eeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC---cccccccchhhhhhhh--------hhhccc
Q psy5718 181 KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF---TVARLYISKMKSEVKN--------LVARCT 247 (720)
Q Consensus 181 kL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~---~hIPYRdSKLTrLLqd--------~mI~~i 247 (720)
+|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .||||||||||||||| +||+||
T Consensus 239 kL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~v 318 (347)
T 1f9v_A 239 TLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNI 318 (347)
T ss_dssp EEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEE
T ss_pred EEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEe
Confidence 999999999999999999999999999999999999999 998876 8999999999999999 899999
Q ss_pred cCCcccHHHHHhHHHHHHHhccccccch
Q psy5718 248 SMESSQAEEHKKAIEYEKELGETRLLLQ 275 (720)
Q Consensus 248 SPs~~~~~ETlsTL~fa~rak~Ikn~~~ 275 (720)
||+..+++||++||+||+||++|++.+.
T Consensus 319 sP~~~~~~ETl~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 319 SPSSSHINETLNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp CCSGGGHHHHHHHHHHHHHHCCTTTC--
T ss_pred CCccccHHHHHHHHHHHHHHhhhccCCC
Confidence 9999999999999999999999998764
No 20
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=3.8e-58 Score=501.96 Aligned_cols=255 Identities=26% Similarity=0.314 Sum_probs=200.2
Q ss_pred CCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------------CCeeeecceecCCCCChHHHHHHhh
Q psy5718 11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------------GGKFYLFDKVFKPNATQEKVYDEAA 77 (720)
Q Consensus 11 ~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------------~~k~F~FD~VF~~~asQeeVY~~~~ 77 (720)
+..+++|+|+|||||+++.|...+...++.++++. .+.+ ..+.|.||+||+++++|++||+.++
T Consensus 47 ~~~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~---~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~~ 123 (387)
T 2heh_A 47 PIEEHRICVCVRKRPLNKQELAKKEIDVISIPSKC---LLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTA 123 (387)
T ss_dssp CCCCCSEEEEEEECCCCHHHHHTTCCBCEECCBSS---EEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTT
T ss_pred CCCCCCeEEEEECCCCChHHhccCCceEEEECCCC---EEEEeCCCccccccccccccEEeeeEEEecCCCceeehhhhH
Confidence 34579999999999999999888877788776654 2221 2368999999999999999999999
Q ss_pred hhcceeeecC--------------------C-------CCceeehhhhhhhhhhhhhhcc-cccceeE------------
Q psy5718 78 KSIVSVQFVD--------------------A-------DQYMVSVDRLRSDHQLKASTMC-EHSLMHL------------ 117 (720)
Q Consensus 78 ~plV~~vl~G--------------------~-------~~~~GIIpRav~~LF~~i~~~~-~~~~~~v------------ 117 (720)
.|+|+++|+| . ...+|||||++.+||..+.... ....|.+
T Consensus 124 ~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v 203 (387)
T 2heh_A 124 RPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKL 203 (387)
T ss_dssp HHHHHHHHTTCEEEEEEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEE
T ss_pred HHHHHHHhcCCceEEEEecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeE
Confidence 9999999999 1 2468999999999999886532 1222222
Q ss_pred -------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccc
Q psy5718 118 -------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKL 178 (720)
Q Consensus 118 -------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~ 178 (720)
+||.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.. ..
T Consensus 204 ~DLL~~~~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-----~~ 278 (387)
T 2heh_A 204 FDLLNKKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKG-----RM 278 (387)
T ss_dssp EETTTTTEECEEEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESSS-----SE
T ss_pred EECCCCCccceEEEcCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEECC-----ee
Confidence 899999999999999999999999999999999999999999999999998752 46
Q ss_pred cceeeeeeccCCcccccCCC-cccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh---------hhhcc
Q psy5718 179 SGKLYLVDLAGSEKVSKTGA-EGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN---------LVARC 246 (720)
Q Consensus 179 ~skL~lVDLAGSEr~~kt~~-~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd---------~mI~~ 246 (720)
.|+|+|||||||||..++++ .+.+++|+++||+||++||+| ||+.+..||||||||||||||| +||+|
T Consensus 279 ~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgnskT~mIa~ 358 (387)
T 2heh_A 279 HGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAT 358 (387)
T ss_dssp EEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTTEEEEEEEE
T ss_pred eeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhcCCCCCCccccHHHHHHhhhccCCCCeEEEEEE
Confidence 79999999999999988864 567888999999999999999 9999889999999999999999 89999
Q ss_pred ccCCcccHHHHHhHHHHHHHhcccccc
Q psy5718 247 TSMESSQAEEHKKAIEYEKELGETRLL 273 (720)
Q Consensus 247 iSPs~~~~~ETlsTL~fa~rak~Ikn~ 273 (720)
|||+..+++||++||+||.|||+|++.
T Consensus 359 isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 359 ISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred eCCccchHHHHHHHHHHHHHhccCcCC
Confidence 999999999999999999999999875
No 21
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=6e-58 Score=503.31 Aligned_cols=256 Identities=26% Similarity=0.289 Sum_probs=201.5
Q ss_pred CCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------------CCeeeecceecCCCCChHHHHHHhhh
Q psy5718 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------------GGKFYLFDKVFKPNATQEKVYDEAAK 78 (720)
Q Consensus 12 ~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------------~~k~F~FD~VF~~~asQeeVY~~~~~ 78 (720)
...++|+|+|||||+++.|...+...++.++++. ++.+ ..+.|.||+||+++++|++||+.++.
T Consensus 68 ~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~---~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~~ 144 (410)
T 1v8k_A 68 IEEHRICVCVRKRPLNKQELAKKEIDVISVPSKC---LLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTAR 144 (410)
T ss_dssp TSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSS---EEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTH
T ss_pred CCCCCeEEEEEeCCCChhHhhcCCccEEEECCCC---EEEEecCcccccccccccceEEeeeEEEecCCChhhhhHHHHH
Confidence 3478999999999999999888887788877654 2222 23689999999999999999999999
Q ss_pred hcceeeecC--------------------C-------CCceeehhhhhhhhhhhhhhcc-cccceeE-------------
Q psy5718 79 SIVSVQFVD--------------------A-------DQYMVSVDRLRSDHQLKASTMC-EHSLMHL------------- 117 (720)
Q Consensus 79 plV~~vl~G--------------------~-------~~~~GIIpRav~~LF~~i~~~~-~~~~~~v------------- 117 (720)
|+|+++|+| . ...+|||||++.+||..+.... ....|.+
T Consensus 145 plV~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~ 224 (410)
T 1v8k_A 145 PLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVF 224 (410)
T ss_dssp HHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEE
T ss_pred HHHHHHhcCCceeEEeecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEE
Confidence 999999999 1 2468999999999999886532 1222222
Q ss_pred ------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCccccc
Q psy5718 118 ------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLS 179 (720)
Q Consensus 118 ------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~ 179 (720)
+||.|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.. ...
T Consensus 225 DLL~~~~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-----~~~ 299 (410)
T 1v8k_A 225 DLLNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG-----RLH 299 (410)
T ss_dssp ETTTTTEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS-----SEE
T ss_pred ECCCCCCCceEEECCCCCeEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC-----cce
Confidence 899999999999999999999999999999999999999999999999998752 467
Q ss_pred ceeeeeeccCCcccccCCC-cccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh---------hhhccc
Q psy5718 180 GKLYLVDLAGSEKVSKTGA-EGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN---------LVARCT 247 (720)
Q Consensus 180 skL~lVDLAGSEr~~kt~~-~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd---------~mI~~i 247 (720)
|+|+|||||||||..++++ .|.+++|+++||+||++||+| ||+.+..||||||||||+|||| +||+||
T Consensus 300 skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgnskT~mIa~i 379 (410)
T 1v8k_A 300 GKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMI 379 (410)
T ss_dssp EEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEEEEEEEEE
T ss_pred eEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhcCCCCCCcccchhHHHHhhcccCCCceEEEEEEe
Confidence 9999999999999988864 567888999999999999999 9998889999999999999999 899999
Q ss_pred cCCcccHHHHHhHHHHHHHhccccccch
Q psy5718 248 SMESSQAEEHKKAIEYEKELGETRLLLQ 275 (720)
Q Consensus 248 SPs~~~~~ETlsTL~fa~rak~Ikn~~~ 275 (720)
||+..+++||++||+||.||+.|..+|.
T Consensus 380 SP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 380 SPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp CCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred CCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 9999999999999999999999988774
No 22
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.4e-58 Score=499.55 Aligned_cols=257 Identities=28% Similarity=0.341 Sum_probs=191.2
Q ss_pred CCCCCEEEEEeeCCCCchhhccCCceEEEecCC-----Cccceeee-----------------CCeeeecceecCCCCCh
Q psy5718 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-----GEENGLSL-----------------GGKFYLFDKVFKPNATQ 69 (720)
Q Consensus 12 ~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~-----~~~~~v~~-----------------~~k~F~FD~VF~~~asQ 69 (720)
..+++|+|+|||||+++.|...+...+ .++.+ ....++.+ ..+.|.||+||+++++|
T Consensus 19 ~~~~~irV~vRvRP~~~~E~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q 97 (376)
T 2rep_A 19 SLKGNIRVFCRVRPVLPGEPTPPPGLL-LFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDRVFPPGSGQ 97 (376)
T ss_dssp ----CEEEEEEECCCCTTSCCCCGGGS-BCCC------CCCCEEECCC-----------------CEEECSEEECTTCCH
T ss_pred ccCCCeEEEEEcCCCChhhcccCCceE-EEccCcccccCCCcEEEEecCCccccccccccCCCCceeeeecEEcCCcccc
Confidence 457899999999999999876543211 11110 00011111 13579999999999999
Q ss_pred HHHHHHhhhhcceeeecC---------------------C----CCceeehhhhhhhhhhhhhhccc-ccceeE------
Q psy5718 70 EKVYDEAAKSIVSVQFVD---------------------A----DQYMVSVDRLRSDHQLKASTMCE-HSLMHL------ 117 (720)
Q Consensus 70 eeVY~~~~~plV~~vl~G---------------------~----~~~~GIIpRav~~LF~~i~~~~~-~~~~~v------ 117 (720)
++||+.+ .|+|+++|+| + +..+|||||++.+||..+..... .+.|.+
T Consensus 98 ~~Vy~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~E 176 (376)
T 2rep_A 98 DEVFEEI-AMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVE 176 (376)
T ss_dssp HHHHHHH-HHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred hhhhhhH-HHHHHHhcCCCceEEEEeCCCCCCCceEeecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEE
Confidence 9999996 5899999999 1 24789999999999998865321 222222
Q ss_pred ---------------------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEE
Q psy5718 118 ---------------------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFL 164 (720)
Q Consensus 118 ---------------------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~Ift 164 (720)
++|.|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+
T Consensus 177 IYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ift 256 (376)
T 2rep_A 177 IYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQ 256 (376)
T ss_dssp EETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGGSEEEEE
T ss_pred EECCEeeEccccccccccCCCceEEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEE
Confidence 68999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecCCcccccceeeeeeccCCcccccCCCcc----cchHHhhhhccCCccccCc--ccccCCcccccccchhhhh
Q psy5718 165 INVKQENLENEKKLSGKLYLVDLAGSEKVSKTGAEG----TVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSE 238 (720)
Q Consensus 165 I~v~q~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g----~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrL 238 (720)
|+|.+.+...+....|+|+|||||||||++++++.| .+++|+.+||+||++||+| ||+++..||||||||||||
T Consensus 257 i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLT~L 336 (376)
T 2rep_A 257 LQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYL 336 (376)
T ss_dssp EEEEEEESSSCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTCSCCCGGGSHHHHH
T ss_pred EEEEEEecCCCcEEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHHhcCCCccCCcCCHHHHH
Confidence 999998877777788999999999999999999999 9999999999999999999 9999999999999999999
Q ss_pred hhh--------hhhccccCCcccHHHHHhHHHHHHHhccc
Q psy5718 239 VKN--------LVARCTSMESSQAEEHKKAIEYEKELGET 270 (720)
Q Consensus 239 Lqd--------~mI~~iSPs~~~~~ETlsTL~fa~rak~I 270 (720)
||| +||+||||+..+++||++||+||+|++.+
T Consensus 337 LqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 337 LQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp TGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 999 89999999999999999999999999864
No 23
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-58 Score=499.22 Aligned_cols=258 Identities=25% Similarity=0.334 Sum_probs=192.4
Q ss_pred CCCCCCEEEEEeeCCCCchhhcc----CCceEEEecCCCccceeee----CCeeeecceecCCCCChHHHHHHhhhhcce
Q psy5718 11 IAAEDSIRVVCRFRPLNHSEEKA----GSKFIVKFPSGGEENGLSL----GGKFYLFDKVFKPNATQEKVYDEAAKSIVS 82 (720)
Q Consensus 11 ~~~~~~IrV~vRVRPl~~~E~~~----g~~~iv~~~~~~~~~~v~~----~~k~F~FD~VF~~~asQeeVY~~~~~plV~ 82 (720)
.+.+++|+|||||||+++.+... .+...+.+........... ..+.|.||+||++ ++|++||+.++.|+|+
T Consensus 20 ~~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~~-~sQ~~Vy~~~~~plv~ 98 (359)
T 3nwn_A 20 MGTRKKVHAFVRVKPTDDFAHEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLHD-ASQDLVYETVAKDVVS 98 (359)
T ss_dssp ----CCEEEEEEECCCSSCCTTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEES-CCHHHHHHHHTHHHHH
T ss_pred CCCCCCEEEEEEcCCCCcccccceeecCCCcEEEEecCCccccccccCCcCceEeecCccCCC-CCHHHHHHHHHHHHHH
Confidence 35678999999999998765321 1111222211110000001 1367999999975 8999999999999999
Q ss_pred eeecC------------------------CCCceeehhhhhhhhhhhhhhcccccceeE---------------------
Q psy5718 83 VQFVD------------------------ADQYMVSVDRLRSDHQLKASTMCEHSLMHL--------------------- 117 (720)
Q Consensus 83 ~vl~G------------------------~~~~~GIIpRav~~LF~~i~~~~~~~~~~v--------------------- 117 (720)
++|+| +...+|||||++.+||..+..... ..|.+
T Consensus 99 ~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~Giipra~~~lF~~~~~~~~-~~~~v~vS~~EIYnE~i~DLL~~~~~ 177 (359)
T 3nwn_A 99 QALDGYNGTIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEERPT-HAITVRVSYLEIYNESLFDLLSTLPY 177 (359)
T ss_dssp HHHTTCCEEEEEEESTTSSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCTT-SCEEEEEEEEEEETTEEEETTSSSTT
T ss_pred HHhCCCCEEEEEeCCCCCCccEEeCCccCCccchhhHHHHHHHHHHHhhcCCC-CcEEEEEEEEEEeccccccccccccc
Confidence 99999 234689999999999998865432 22222
Q ss_pred ----------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC--Cccccc
Q psy5718 118 ----------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE--NEKKLS 179 (720)
Q Consensus 118 ----------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~--~~~~~~ 179 (720)
++|+|++++.|.|+++++.+|..|..+|++++|.||..|||||+||+|+|.+.... ......
T Consensus 178 ~~~~~~~~~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~ 257 (359)
T 3nwn_A 178 VGPSVTPMTIVENPQGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYIT 257 (359)
T ss_dssp SCTTTSCCEEEEETTEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEE
T ss_pred cccccccceEEecCCceEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeecccccCccccc
Confidence 79999999999999999999999999999999999999999999999999876543 345678
Q ss_pred ceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhcccc
Q psy5718 180 GKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTS 248 (720)
Q Consensus 180 skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iS 248 (720)
|+|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .||||||||||||||| +||+|||
T Consensus 258 skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~is 337 (359)
T 3nwn_A 258 SKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIY 337 (359)
T ss_dssp EEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEEC
T ss_pred ccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeC
Confidence 9999999999999999999999999999999999999999 998765 7999999999999999 8999999
Q ss_pred CCcccHHHHHhHHHHHHHhccc
Q psy5718 249 MESSQAEEHKKAIEYEKELGET 270 (720)
Q Consensus 249 Ps~~~~~ETlsTL~fa~rak~I 270 (720)
|+..+++||++||+||+|||+|
T Consensus 338 P~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 338 GEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp CSGGGHHHHHHHHHHHTTGGGC
T ss_pred CchhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999987
No 24
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=1.6e-57 Score=493.60 Aligned_cols=252 Identities=28% Similarity=0.357 Sum_probs=203.7
Q ss_pred CCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------------CCeeeecceecC--------CCCChHHHH
Q psy5718 15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------------GGKFYLFDKVFK--------PNATQEKVY 73 (720)
Q Consensus 15 ~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------------~~k~F~FD~VF~--------~~asQeeVY 73 (720)
.+|+|+|||||+++.|...+...++.++++. .+.. ..+.|.||+||| +.++|++||
T Consensus 1 S~VkV~vRvRPl~~~E~~~~~~~vv~~~~~~---~~~~~~~~~~~~~~~~~~~k~F~FD~vF~~~d~~~~~~~a~Q~~vy 77 (354)
T 3gbj_A 1 SKVKVAVRIRPMNRRETDLHTKCVVDVDANK---VILNPVNTNLSKGDARGQPKVFAYDHCFWSMDESVKEKYAGQDIVF 77 (354)
T ss_dssp -CEEEEEEECCCCHHHHHHTCCBCEEEETTE---EEECCC-----------CCEEEECSEEEECSCTTCTTTBCCHHHHH
T ss_pred CCcEEEEECCCCChhhhccCCceEEEeCCCe---EEEeCCccccccccccCCceEEEeeEEeccCccccccccccHHHHH
Confidence 3799999999999999888877777776654 2211 247899999994 568899999
Q ss_pred HHhhhhcceeeecC---------------------CCCceeehhhhhhhhhhhhhhcc-cccceeE--------------
Q psy5718 74 DEAAKSIVSVQFVD---------------------ADQYMVSVDRLRSDHQLKASTMC-EHSLMHL-------------- 117 (720)
Q Consensus 74 ~~~~~plV~~vl~G---------------------~~~~~GIIpRav~~LF~~i~~~~-~~~~~~v-------------- 117 (720)
+.++.|+|+++|+| +...+|||||++.+||..+.... ....|.+
T Consensus 78 ~~~~~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~D 157 (354)
T 3gbj_A 78 KCLGENILQNAFDGYNACIFAYGQTGSGKSYTMMGTADQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRD 157 (354)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEE
T ss_pred HHhhHHHHHHHhCCceeEEEeeCCCCCCCceEEecCCCCCchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeE
Confidence 99999999999999 56789999999999999886432 2222322
Q ss_pred --------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC----
Q psy5718 118 --------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE---- 173 (720)
Q Consensus 118 --------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~---- 173 (720)
+||+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+....
T Consensus 158 LL~~~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~ 237 (354)
T 3gbj_A 158 LLDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSG 237 (354)
T ss_dssp TTC------CBCBC------CCBTTCCCEEECSHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECTTSC
T ss_pred ccCCCCCCcceEEEEcCCCCEEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCC
Confidence 68999999999999999999999999999999999999999999999999886432
Q ss_pred CcccccceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--cccc------CCcccccccchhhhhhhh----
Q psy5718 174 NEKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEE------EFTVARLYISKMKSEVKN---- 241 (720)
Q Consensus 174 ~~~~~~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~------~~~hIPYRdSKLTrLLqd---- 241 (720)
......|+|+|||||||||+.++++.|.+++|+.+||+||++||+| +|++ +..|||||||||||||||
T Consensus 238 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgG 317 (354)
T 3gbj_A 238 TSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGG 317 (354)
T ss_dssp EEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHST
T ss_pred CCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCC
Confidence 2345679999999999999999999999999999999999999999 8875 237999999999999999
Q ss_pred ----hhhccccCCcccHHHHHhHHHHHHHhcc
Q psy5718 242 ----LVARCTSMESSQAEEHKKAIEYEKELGE 269 (720)
Q Consensus 242 ----~mI~~iSPs~~~~~ETlsTL~fa~rak~ 269 (720)
+||+||||+..+++||++||+||.||+.
T Consensus 318 nskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 318 NSKTAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp TCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred CCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 8999999999999999999999999985
No 25
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-57 Score=500.36 Aligned_cols=261 Identities=26% Similarity=0.276 Sum_probs=212.8
Q ss_pred CCCEEEEEeeCCCCch-hhccCCceEEEecCC-Cccceeee---C----CeeeecceecCCCCChHHHHHHhhhhcceee
Q psy5718 14 EDSIRVVCRFRPLNHS-EEKAGSKFIVKFPSG-GEENGLSL---G----GKFYLFDKVFKPNATQEKVYDEAAKSIVSVQ 84 (720)
Q Consensus 14 ~~~IrV~vRVRPl~~~-E~~~g~~~iv~~~~~-~~~~~v~~---~----~k~F~FD~VF~~~asQeeVY~~~~~plV~~v 84 (720)
+|+|+|||||||+.+. |........+...++ .....+.+ . .+.|.||+||+++++|++||+.+ .|+|+++
T Consensus 58 kgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v-~~lv~~~ 136 (403)
T 4etp_A 58 RGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEV-GQLVQSS 136 (403)
T ss_dssp HCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECSSSCEEEEEEESEEECTTCCHHHHHHHH-HHHHHHH
T ss_pred CCCeEEEEEeCCCCCcccccCCCeeEEeeccCCCCceEEEEecCCCCcCceEEEcCEEECCCCchHHHHHHH-HHHHHHH
Confidence 5899999999999877 332223222322222 11112221 1 37899999999999999999986 5899999
Q ss_pred ecC-------------------CCCceeehhhhhhhhhhhhhhccc-ccceeE---------------------------
Q psy5718 85 FVD-------------------ADQYMVSVDRLRSDHQLKASTMCE-HSLMHL--------------------------- 117 (720)
Q Consensus 85 l~G-------------------~~~~~GIIpRav~~LF~~i~~~~~-~~~~~v--------------------------- 117 (720)
|+| .+..+|||||++.+||..+..... .+.|.+
T Consensus 137 l~G~N~tifAYGqTGSGKTyTM~g~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~ 216 (403)
T 4etp_A 137 LDGYNVAIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTS 216 (403)
T ss_dssp HTTCCEEEEEESCTTSSHHHHHHCTTTSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------C
T ss_pred hCCcceEEEEECCCCCCCceEeCCCCCccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccc
Confidence 999 234579999999999998875322 222222
Q ss_pred ---------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCccccccee
Q psy5718 118 ---------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKL 182 (720)
Q Consensus 118 ---------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL 182 (720)
++|.|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....|+|
T Consensus 217 ~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL 296 (403)
T 4etp_A 217 IGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTL 296 (403)
T ss_dssp CSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTCCEEEEEE
T ss_pred cCcceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecCCCCeeEEEE
Confidence 68999999999999999999999999999999999999999999999999999888877888999
Q ss_pred eeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC---cccccccchhhhhhhh--------hhhccccC
Q psy5718 183 YLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF---TVARLYISKMKSEVKN--------LVARCTSM 249 (720)
Q Consensus 183 ~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~---~hIPYRdSKLTrLLqd--------~mI~~iSP 249 (720)
+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .||||||||||+|||| +||+||||
T Consensus 297 ~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP 376 (403)
T 4etp_A 297 NLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISP 376 (403)
T ss_dssp EEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECC
T ss_pred EEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCC
Confidence 9999999999999999999999999999999999999 998765 5999999999999999 89999999
Q ss_pred CcccHHHHHhHHHHHHHhccccccch
Q psy5718 250 ESSQAEEHKKAIEYEKELGETRLLLQ 275 (720)
Q Consensus 250 s~~~~~ETlsTL~fa~rak~Ikn~~~ 275 (720)
+..+++||++||+||+|++.|+..|.
T Consensus 377 ~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 377 SSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp SGGGHHHHHHHHHHHHHHCCC-----
T ss_pred chhhHHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999999998764
No 26
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=1.6e-56 Score=493.79 Aligned_cols=253 Identities=25% Similarity=0.296 Sum_probs=207.1
Q ss_pred CCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-----------CCeeeecceecCCCCChHHHHHHhhhhcc
Q psy5718 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-----------GGKFYLFDKVFKPNATQEKVYDEAAKSIV 81 (720)
Q Consensus 13 ~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-----------~~k~F~FD~VF~~~asQeeVY~~~~~plV 81 (720)
.+|+|+|||||||+++.|...+. .++.++++. ++.+ +.+.|.||+||+++++|++||+.+ .|+|
T Consensus 57 l~gnIrV~vRvRP~~~~E~~~~~-~~~~~~~~~---~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v-~plv 131 (412)
T 3u06_A 57 LRDNIRVFCRIRPPLESEENRMC-CTWTYHDES---TVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMV-SPLI 131 (412)
T ss_dssp HTCSEEEEEEECCCCGGGTTSCB-CEEEEEETT---EEEEECCC-------CCCEEECSEEECTTCCHHHHHTTT-HHHH
T ss_pred hCCCEEEEEEcCCCCchhccCcc-eEEEecCCC---EEEEecCCcccccccCceEEeeCeEcCCCCCHHHHHHHH-HHHH
Confidence 36899999999999998865443 233333332 2222 246899999999999999999865 6999
Q ss_pred eeeecC---------------------CCCceeehhhhhhhhhhhhhhccc-ccceeE----------------------
Q psy5718 82 SVQFVD---------------------ADQYMVSVDRLRSDHQLKASTMCE-HSLMHL---------------------- 117 (720)
Q Consensus 82 ~~vl~G---------------------~~~~~GIIpRav~~LF~~i~~~~~-~~~~~v---------------------- 117 (720)
+++|+| .+..+|||||++.+||..+..... .+.|.+
T Consensus 132 ~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~ 211 (412)
T 3u06_A 132 QSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKD 211 (412)
T ss_dssp HHHHTTCCEEEEEESSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCCC
T ss_pred HHHHCCCceEEEEecCCCCCCeeEecCCCCCCccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCCCC
Confidence 999999 457899999999999999876322 233332
Q ss_pred ------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCcccccceeeee
Q psy5718 118 ------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLSGKLYLV 185 (720)
Q Consensus 118 ------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~skL~lV 185 (720)
+||+|++++.|.|+++++.+|..|..+|++++|.||..|||||+||+|+|.+.+...+....|+|+||
T Consensus 212 ~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lV 291 (412)
T 3u06_A 212 MEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLV 291 (412)
T ss_dssp CCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred ceeeeeecCCCCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCCCCCEEEEEEEEE
Confidence 79999999999999999999999999999999999999999999999999999888888888999999
Q ss_pred eccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCCcccccccchhhhhhhh--------hhhccccCCcccHH
Q psy5718 186 DLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEFTVARLYISKMKSEVKN--------LVARCTSMESSQAE 255 (720)
Q Consensus 186 DLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ 255 (720)
|||||||.. .|.+++|+.+||+||++||+| ||+.+..||||||||||||||| +||+||||+..+++
T Consensus 292 DLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ 367 (412)
T 3u06_A 292 DLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQ 367 (412)
T ss_dssp ECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHH
T ss_pred ECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHHHhccCCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHH
Confidence 999999963 468999999999999999999 9999999999999999999999 89999999999999
Q ss_pred HHHhHHHHHHHhccccccc
Q psy5718 256 EHKKAIEYEKELGETRLLL 274 (720)
Q Consensus 256 ETlsTL~fa~rak~Ikn~~ 274 (720)
||++||+||+|++.|+..+
T Consensus 368 ETl~TLrfA~rv~~i~~~~ 386 (412)
T 3u06_A 368 ESVKSLRFAASVNSCKMTK 386 (412)
T ss_dssp HHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHhhccccc
Confidence 9999999999999998544
No 27
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=6.9e-57 Score=488.86 Aligned_cols=256 Identities=26% Similarity=0.369 Sum_probs=192.7
Q ss_pred CcCCCCCCCEEEEEeeCCCCchhhccCCceEEEecCCCccceeee-------------CCeeeecceecCCCCChHHHHH
Q psy5718 8 DREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL-------------GGKFYLFDKVFKPNATQEKVYD 74 (720)
Q Consensus 8 ~~~~~~~~~IrV~vRVRPl~~~E~~~g~~~iv~~~~~~~~~~v~~-------------~~k~F~FD~VF~~~asQeeVY~ 74 (720)
+.+.+.+|+|||||||||+.+.+ ..++.++++.....+.. ..+.|.||+||+ +++|++||+
T Consensus 16 ~~~~~~~g~IrV~vRvRP~~~~~-----~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~F~fD~Vf~-~~sQ~~Vy~ 89 (358)
T 2nr8_A 16 PRGSGTRKKVHAFVRVKPTDDFA-----HEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLH-DASQDLVYE 89 (358)
T ss_dssp -------CCEEEEEEECCCSSCC-----TTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEE-SCCHHHHHH
T ss_pred cCCCCCCCCeEEEEEcCCCCCCc-----cceeEECCCCCEEEEecCCccccccccCCCcceEEECCeecC-CcCHHHHHH
Confidence 34556789999999999987543 22344444332222221 125799999995 799999999
Q ss_pred HhhhhcceeeecC---------------------CC---CceeehhhhhhhhhhhhhhcccccceeE-------------
Q psy5718 75 EAAKSIVSVQFVD---------------------AD---QYMVSVDRLRSDHQLKASTMCEHSLMHL------------- 117 (720)
Q Consensus 75 ~~~~plV~~vl~G---------------------~~---~~~GIIpRav~~LF~~i~~~~~~~~~~v------------- 117 (720)
.++.|+|+++|+| +. ..+|||||++.+||..+..... ..|.+
T Consensus 90 ~~~~~lv~~~l~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~Giipra~~~lF~~i~~~~~-~~~~v~vS~~EIYnE~i~ 168 (358)
T 2nr8_A 90 TVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEERPT-HAITVRVSYLEIYNESLF 168 (358)
T ss_dssp HHTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCTT-SCEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCCCceEecccccccccCCcHHHHHHHHHHHHhhcCC-ceEEEEEEEEEEeCCeee
Confidence 9999999999999 11 3589999999999999876422 11211
Q ss_pred ------------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC
Q psy5718 118 ------------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE 173 (720)
Q Consensus 118 ------------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~ 173 (720)
+||+|++++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|.+.+..
T Consensus 169 DLL~~~~~~~~~~~~l~i~e~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~ 248 (358)
T 2nr8_A 169 DLLSTLPYVGPSVTPMTIVENPQGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRT 248 (358)
T ss_dssp ETTSSSTTSCTTTSCCEEEEETTEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC---
T ss_pred ECcCCccccCccCCceEEEECCCceEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEecc
Confidence 78999999999999999999999999999999999999999999999999986543
Q ss_pred --CcccccceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC-cccccccchhhhhhhh-------
Q psy5718 174 --NEKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN------- 241 (720)
Q Consensus 174 --~~~~~~skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd------- 241 (720)
......|+|+|||||||||++++++.|.+++|+.+||+||++||+| ||+++. .||||||||||+||||
T Consensus 249 ~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgGnsk 328 (358)
T 2nr8_A 249 LSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCN 328 (358)
T ss_dssp ----CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSE
T ss_pred CCCCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCCe
Confidence 3455689999999999999999999999999999999999999999 998765 7999999999999999
Q ss_pred -hhhccccCCcccHHHHHhHHHHHHHhccc
Q psy5718 242 -LVARCTSMESSQAEEHKKAIEYEKELGET 270 (720)
Q Consensus 242 -~mI~~iSPs~~~~~ETlsTL~fa~rak~I 270 (720)
+||+||||+..+++||++||+||+|||.|
T Consensus 329 t~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 329 MVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp EEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred EEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999986
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=5.1e-53 Score=497.53 Aligned_cols=259 Identities=25% Similarity=0.348 Sum_probs=193.8
Q ss_pred CCCCCEEEEEeeC----CCCchhhccCCce-EEEecCCCc---cceeee--------CCeeeecceecCCCCChHHHHHH
Q psy5718 12 AAEDSIRVVCRFR----PLNHSEEKAGSKF-IVKFPSGGE---ENGLSL--------GGKFYLFDKVFKPNATQEKVYDE 75 (720)
Q Consensus 12 ~~~~~IrV~vRVR----Pl~~~E~~~g~~~-iv~~~~~~~---~~~v~~--------~~k~F~FD~VF~~~asQeeVY~~ 75 (720)
.--++++|||||| |....|...|... .+..|++-. ...+.+ ..+.|.||+||+++++|++||+.
T Consensus 371 ~il~~~rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fd~vf~~~~~q~~v~~~ 450 (715)
T 4h1g_A 371 ALKGNIRVFCRIRNVSSSSSSSSSSSSEDIIQYEAPQDINDESKQELVITRNINNNFSNLRFLFDKIFEREQSNDLVFEE 450 (715)
T ss_dssp SSSCSEEEEEEECCCC-------------BCEEECCC-------CEEEEEEEETTEEEEEEEECSEEECSSCCHHHHGGG
T ss_pred HHHhcCeEEEEEeccccccccccccccccceeccCCCCCCCCCCCeEEEcCCCCCCCCCeEEEeceEeCCCCCHHHHHHH
Confidence 3447899999999 5555554444333 333332211 112221 14799999999999999999997
Q ss_pred hhhhcceeeecC-------------------CCCceeehhhhhhhhhhhhhhccc-ccceeE------------------
Q psy5718 76 AAKSIVSVQFVD-------------------ADQYMVSVDRLRSDHQLKASTMCE-HSLMHL------------------ 117 (720)
Q Consensus 76 ~~~plV~~vl~G-------------------~~~~~GIIpRav~~LF~~i~~~~~-~~~~~v------------------ 117 (720)
+ .|+|+++|+| ....+|||||++++||..+..... ...|.+
T Consensus 451 ~-~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~ 529 (715)
T 4h1g_A 451 L-SQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNP 529 (715)
T ss_dssp T-HHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTTTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSC
T ss_pred H-HHHHHHHhCCceEEEEccCCCCCchhhccCCCCCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCC
Confidence 6 5999999999 345789999999999999876432 222222
Q ss_pred ------------------EEecCcEEEEecChhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecCCccccc
Q psy5718 118 ------------------IVFPGATERFVGKPEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLENEKKLS 179 (720)
Q Consensus 118 ------------------~~V~gltev~V~S~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~~~~~~~ 179 (720)
++|+|++++.|.|+++++.+|..|.++|++++|.||.+|||||+||+|+|.+.+........
T Consensus 530 ~~~~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~~~~~~ 609 (715)
T 4h1g_A 530 KIDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLTKESSY 609 (715)
T ss_dssp CCCTTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETTTCCEEE
T ss_pred CCCCCCcceeEEecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecCCCCEeE
Confidence 78999999999999999999999999999999999999999999999999999888888889
Q ss_pred ceeeeeeccCCcccccCCCcccchHHhhhhccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhcccc
Q psy5718 180 GKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTS 248 (720)
Q Consensus 180 skL~lVDLAGSEr~~kt~~~g~rl~E~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iS 248 (720)
|+|+|||||||||++++++.|.+++|+.+||+||++||+| +|+.+. .||||||||||||||| +||+|||
T Consensus 610 ~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~is 689 (715)
T 4h1g_A 610 GTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNIS 689 (715)
T ss_dssp EEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEEC
T ss_pred EEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEEC
Confidence 9999999999999999999999999999999999999999 997655 8999999999999999 8999999
Q ss_pred CCcccHHHHHhHHHHHHHhcccc
Q psy5718 249 MESSQAEEHKKAIEYEKELGETR 271 (720)
Q Consensus 249 Ps~~~~~ETlsTL~fa~rak~Ik 271 (720)
|+..+++||++||+||+|||+|+
T Consensus 690 p~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 690 PLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp CBGGGHHHHHHHHHHHHHHCC--
T ss_pred CChhhHHHHHHHHHHHHHhccce
Confidence 99999999999999999999997
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.87 E-value=8.7e-24 Score=188.82 Aligned_cols=86 Identities=28% Similarity=0.256 Sum_probs=75.8
Q ss_pred hhhhccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhccccCCcccHHHHHhHHHHHHHhccccccc
Q psy5718 206 AKNINKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAIEYEKELGETRLLL 274 (720)
Q Consensus 206 ~~~INkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~ 274 (720)
+.+||+||++||+| +|+++. .||||||||||+|||| +||+||||+..+++||++||+||.||+.|+|.|
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~ 80 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV 80 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcc
Confidence 46899999999999 998884 8999999999999999 899999999999999999999999999999999
Q ss_pred hhhhHH--HHHHHHHHHHH
Q psy5718 275 QTNERR--EQARKDLKGLE 291 (720)
Q Consensus 275 ~vN~~~--~~~~~~Lk~ei 291 (720)
.+|... ...+++|+.+|
T Consensus 81 ~~n~~~~~~~l~~~~~~e~ 99 (100)
T 2kin_B 81 SVNLELTAEEWKKKYEKEK 99 (100)
T ss_dssp CCEEECCHHHHHHHHHHHH
T ss_pred eeccCCCHHHHHHHHHHhh
Confidence 999843 23335555544
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.86 E-value=4.9e-23 Score=189.60 Aligned_cols=92 Identities=26% Similarity=0.251 Sum_probs=81.8
Q ss_pred ccCCccccCc--ccccCC-cccccccchhhhhhhh--------hhhccccCCcccHHHHHhHHHHHHHhccccccchhhh
Q psy5718 210 NKSLSADGAG--KLEEEF-TVARLYISKMKSEVKN--------LVARCTSMESSQAEEHKKAIEYEKELGETRLLLQTNE 278 (720)
Q Consensus 210 NkSL~aLg~V--aL~~~~-~hIPYRdSKLTrLLqd--------~mI~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~~vN~ 278 (720)
|+||++||+| +|+++. .||||||||||+||+| +||+||||+..+++||++||+||+||+.|+|.|.+|.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 8999999999 999886 7999999999999999 8999999999999999999999999999999999998
Q ss_pred H---------HH---HHHHHHHHHHHHHHHHHHHH
Q psy5718 279 R---------RE---QARKDLKGLEDTVTKELQTL 301 (720)
Q Consensus 279 ~---------~~---~~~~~Lk~ei~~Lk~EL~~l 301 (720)
. +. .+++.|+..|..|+.|+.+|
T Consensus 81 ~~~~~~l~~~~~~e~~~~~~L~~~i~~Le~el~~~ 115 (117)
T 3kin_B 81 ELTAEEWKKKYEKEKEKNKALKSVIQHLEVELNRW 115 (117)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 12 22366777888888888777
No 31
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.07 E-value=1.2e-10 Score=120.89 Aligned_cols=215 Identities=10% Similarity=0.108 Sum_probs=131.1
Q ss_pred CCCEEEEEeeCCCC-chhhccCCceEEEecCCCccceeeeCCeeeecceecCCCCChH--HHHHHhhhhcceeeec-C--
Q psy5718 14 EDSIRVVCRFRPLN-HSEEKAGSKFIVKFPSGGEENGLSLGGKFYLFDKVFKPNATQE--KVYDEAAKSIVSVQFV-D-- 87 (720)
Q Consensus 14 ~~~IrV~vRVRPl~-~~E~~~g~~~iv~~~~~~~~~~v~~~~k~F~FD~VF~~~asQe--eVY~~~~~plV~~vl~-G-- 87 (720)
+|+|||||||||.. + ..+.+.++..+ ..+..+.+.|.||+||+|.++|+ +||+.+ .++|+.+++ |
T Consensus 23 KGnIRVFcrvrp~~~p------~~~~v~y~~~~--I~v~~~~k~f~FDRVf~p~s~Qe~~~vf~E~-~~~i~scLd~GyN 93 (298)
T 2o0a_A 23 KGTMRCYAYVMEQNLP------ENLLFDYENGV--ITQGLSEHVYKFNRVIPHLKVSEDKFFTQEY-SVYHDMCLNQKKN 93 (298)
T ss_dssp HTCCEEEEEECGGGSC------TTEEEETTTTE--EEETTTCCEEECSEEEETTTSCHHHHHHHTT-HHHHHHHHHTTCC
T ss_pred hCceEEEEEeccccCC------ccceeecCccc--eeecCCCceEEeeeEECccccccHHHHHHHH-HHHHHHHHhCCCc
Confidence 48999999999954 2 22345565543 11111348999999999999999 999995 899999999 8
Q ss_pred ------CCCceeehhhhhhhhhhhhhh-cccccceeE---------------------------------EEecCcEEEE
Q psy5718 88 ------ADQYMVSVDRLRSDHQLKAST-MCEHSLMHL---------------------------------IVFPGATERF 127 (720)
Q Consensus 88 ------~~~~~GIIpRav~~LF~~i~~-~~~~~~~~v---------------------------------~~V~gltev~ 127 (720)
+....|=.||++..+|..... ....+.+.+ .+|.|++.+.
T Consensus 94 vcIfSyGQTGsGKT~ral~q~f~~~~~~~~~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~~~g~~iv~~s~~i~ 173 (298)
T 2o0a_A 94 FNLISLSTTPHGSLRESLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKFEKHSISLDSKLVI 173 (298)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHSTTSHHHHHEEEEEEEEEEECC-CEEETTSCCC------CEEEECSSCEEEESCCEE
T ss_pred eEEEEECCCCCCccHHHHHHHHHHhhhhcccceEEEEEEEEEecCCchHHhcCCCCCCCcceEEecCCCCEEecccEEEE
Confidence 666778889999999988744 221111111 6888999999
Q ss_pred ecC-hhhhHHHHHhhhccccceeccCCCCCCCceeEEEEEEEeeecC---CcccccceeeeeeccCCcccccCCCcccch
Q psy5718 128 VGK-PEEVFEVIEEGKANRHIAVTNMNEHSSRSHSVFLINVKQENLE---NEKKLSGKLYLVDLAGSEKVSKTGAEGTVL 203 (720)
Q Consensus 128 V~S-~eev~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~v~q~~~~---~~~~~~skL~lVDLAGSEr~~kt~~~g~rl 203 (720)
|.+ ++|+..++..+...+ .|. +.-.|+.+.+...+.. +.....--++|+.+.-..-.
T Consensus 174 V~~~~edv~~~~~~~~~~~------~~~---~gi~i~k~~~~~~~~~~~~~~~~~~~d~yf~e~~~~~~~---------- 234 (298)
T 2o0a_A 174 IENGLEDLPLNFSCDEHPN------LPH---SGMGIIKVQFFPRDSKSDGNNDPVPVDFYFIELNNLKSI---------- 234 (298)
T ss_dssp ESSGGGGSCTTTTCC----------------CEEEEEEEEEEESCC-------CCCEEEEEEEECSHHHH----------
T ss_pred ccccHHHHHHHhhcccccc------cCC---CCceEEEEEEecCcccccccCCCCceEEEEEEeCCHHHH----------
Confidence 999 999988884332221 111 2345556655553321 11223445778776643211
Q ss_pred HHhhhhccCCccccCcccccCCcccccccchhhhhhhh-------hhhccccCCcccHHHHHhHHHHHHHhccccccch
Q psy5718 204 DEAKNINKSLSADGAGKLEEEFTVARLYISKMKSEVKN-------LVARCTSMESSQAEEHKKAIEYEKELGETRLLLQ 275 (720)
Q Consensus 204 ~E~~~INkSL~aLg~VaL~~~~~hIPYRdSKLTrLLqd-------~mI~~iSPs~~~~~ETlsTL~fa~rak~Ikn~~~ 275 (720)
..+|++. ..+ .+-.|+++-+|+. ++++++.-+..+ -.-|..+++...++|.-.
T Consensus 235 ---~~l~~~~--------~~~----~~~~spi~~il~~ll~~tks~~~~~l~~~~~~----~~lL~~s~~i~~~~~~~~ 294 (298)
T 2o0a_A 235 ---EQFDKSI--------FKK----ESCETPIALVLKKLISDTKSFFLLNLNDSKNV----NKLLTISEEVQTQLCKRK 294 (298)
T ss_dssp ---HHHHHHH--------HTC-----CCCSHHHHHHHHHHHHSBCEEEEEECCGGGH----HHHHHHHHHHHHHTC---
T ss_pred ---HHHHhhc--------ccc----cccCCcHHHHHHHHHhcCcceEEEEecCCCch----hHHHHHHHHhhcccCccc
Confidence 0111111 111 1223666666665 777877654332 237888888888877543
No 32
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.20 E-value=0.0012 Score=82.07 Aligned_cols=9 Identities=22% Similarity=0.353 Sum_probs=5.5
Q ss_pred hhhccccCC
Q psy5718 242 LVARCTSME 250 (720)
Q Consensus 242 ~mI~~iSPs 250 (720)
.+|-||-|.
T Consensus 679 hfvRCIkPN 687 (1184)
T 1i84_S 679 NFVRCIIPN 687 (1184)
T ss_dssp EECCEECCC
T ss_pred CceeeeCCC
Confidence 566666554
No 33
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.99 E-value=0.0017 Score=80.63 Aligned_cols=22 Identities=5% Similarity=-0.032 Sum_probs=0.0
Q ss_pred hhhHHHHHHHhhhhhhHhhHhh
Q psy5718 542 EEFTVARLYISKMKWRNGETVK 563 (720)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~ 563 (720)
++.+..+--+.++..+.+.+-.
T Consensus 990 ~el~~lee~l~~l~~e~~~le~ 1011 (1184)
T 1i84_S 990 DDILIMEDQNNKLTKERKLLEE 1011 (1184)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444444444333
No 34
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.32 E-value=0.43 Score=48.93 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhh
Q psy5718 424 QLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQK 460 (720)
Q Consensus 424 ~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~ 460 (720)
.++.++..+..+...+.+++.+++..++++...++..
T Consensus 94 aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~ 130 (256)
T 3na7_A 94 SLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDL 130 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444444443333333
No 35
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.28 E-value=0.21 Score=51.32 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 428 EMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTEL 492 (720)
Q Consensus 428 el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el 492 (720)
++..|+.|.+.++.++..++..+.++....+.....++.....++.+..++..+.+.+.+.-.++
T Consensus 91 E~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~ 155 (256)
T 3na7_A 91 ELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNI 155 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888888888888888888888888888888888888888888776666555444443
No 36
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=95.95 E-value=0.5 Score=63.69 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy5718 395 GEMTRLTQENESAKEEVKELITTA------RRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKN 468 (720)
Q Consensus 395 ~Ei~~~~q~~ekLkeq~eell~~~------~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~ 468 (720)
++++.+..++...++..++.++.+ +..+++++.++...++++.+.+++++++...|.+|..+|+....+.+.+.
T Consensus 1983 ~~~~~~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~ 2062 (3245)
T 3vkg_A 1983 VQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIK 2062 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555566665555444443 35667788888888888889999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy5718 469 KEFETLTEELTLKQTTLNTTSTELQQIKDMSNH 501 (720)
Q Consensus 469 ~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~ 501 (720)
.+.+.....|.....-+..|..|-..=.+....
T Consensus 2063 ~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~ 2095 (3245)
T 3vkg_A 2063 TESSKVKNKVDRSIALLDNLNSERGRWEQQSEN 2095 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccHHHHHHH
Confidence 888888888777777777777766555444433
No 37
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.74 E-value=2 Score=58.02 Aligned_cols=33 Identities=12% Similarity=0.017 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhhhcccccccchhHHHHHHhhhcc
Q psy5718 639 EKLKEQIMEQEEVSGLLVCGQTNERREQARKDLKG 673 (720)
Q Consensus 639 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
+..|.. -.+.+.++++-..+...=++||+-++-
T Consensus 2371 ~~sK~~--s~eI~~kl~~a~~te~~I~~~R~~Yrp 2403 (3245)
T 3vkg_A 2371 ETLKKE--TTEIALKVEETETVMQEISEVSALYNP 2403 (3245)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 444444 555555555555555555555555543
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=94.29 E-value=0.3 Score=55.44 Aligned_cols=70 Identities=11% Similarity=0.089 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 425 LQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQ 494 (720)
Q Consensus 425 lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~ 494 (720)
+..++..++++.+....+.....++..++...|++-.++++...+.++...+.+.+...++..+..++.+
T Consensus 507 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~ 576 (597)
T 3oja_B 507 LNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQ 576 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444444444333333333333333333333333333333333333333333333
No 39
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=94.27 E-value=1 Score=50.95 Aligned_cols=13 Identities=46% Similarity=0.455 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHHH
Q psy5718 467 KNKEFETLTEELT 479 (720)
Q Consensus 467 ~~~e~~~l~~el~ 479 (720)
+.++++.+..+..
T Consensus 535 ~~~~~~~~~~~~~ 547 (597)
T 3oja_B 535 KQKETEDLEQENI 547 (597)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhcchhhHHhhhH
Confidence 3333333333333
No 40
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=93.90 E-value=5.3 Score=39.20 Aligned_cols=105 Identities=18% Similarity=0.238 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhh
Q psy5718 381 KLITTARRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQK 460 (720)
Q Consensus 381 k~~ee~~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~ 460 (720)
+-++...+....|...++++..+++.++..+.............||.++..++..++..+.++++++|+--.|.-.....
T Consensus 49 ~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~ 128 (189)
T 2v71_A 49 AQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRAT 128 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 33444555556666678888888888888887777777778889999999999999999999999999988888888887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 461 SQEVETKNKEFETLTEELTLKQTTL 485 (720)
Q Consensus 461 ~~e~e~~~~e~~~l~~el~~~~~~~ 485 (720)
+--+++....+...-+..+=+.+.+
T Consensus 129 ~~SleD~e~kln~aiEr~alLE~El 153 (189)
T 2v71_A 129 IMSLEDFEQRLNQAIERNAFLESEL 153 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777766666666555444433
No 41
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=93.31 E-value=0.087 Score=44.23 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=46.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhcccccccchhHHHHHHhhhccchHhHH
Q psy5718 626 EKDEEINQQSQYAEKLKEQIMEQEEVSGLLVCGQTNERREQARKDLKGLEDTVT 679 (720)
Q Consensus 626 ~lrdei~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~ 679 (720)
.||.+|..||-+|.-|..+|.+......=-++......-+||+.||.+|.--|+
T Consensus 26 ~lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~~a 79 (90)
T 4b6x_A 26 ALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFA 79 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999988888887777777777778999999999976543
No 42
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=93.01 E-value=1.4 Score=54.21 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=24.6
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy5718 432 LTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEEL 478 (720)
Q Consensus 432 lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el 478 (720)
+..|+.+++..++++...++++...|..-.++.+.+...++++.++|
T Consensus 975 ~~~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L 1021 (1080)
T 2dfs_A 975 SEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHET 1021 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555555555544444444433
No 43
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=92.92 E-value=5 Score=36.04 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q psy5718 391 EQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKE 470 (720)
Q Consensus 391 ~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e 470 (720)
..|....++...+++.++..++.....+....-.||.++..|+..++..+.++++++|+=..|.-...-.+--+++....
T Consensus 6 rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k 85 (111)
T 2v66_B 6 RDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQR 85 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHH
Confidence 44666778888888999888888888777888899999999999999999999999999888888887777777776665
Q ss_pred HHHHHHHHH
Q psy5718 471 FETLTEELT 479 (720)
Q Consensus 471 ~~~l~~el~ 479 (720)
+...-+.-+
T Consensus 86 ~n~aiErna 94 (111)
T 2v66_B 86 LNQAIERNA 94 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544433
No 44
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=92.74 E-value=3.1 Score=36.71 Aligned_cols=65 Identities=18% Similarity=0.199 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy5718 412 KELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTE 476 (720)
Q Consensus 412 eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~ 476 (720)
++.......++..|+..+..+..+.+.+.+.+.+..+.|++-......--.+|..+++.++.|-+
T Consensus 36 e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~RriqllEE 100 (101)
T 3u1c_A 36 EERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLVEE 100 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 44455566666778888888888888888888888888887766666666677777777776643
No 45
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=91.60 E-value=5.1 Score=49.19 Aligned_cols=31 Identities=10% Similarity=0.191 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy5718 424 QLQGEMTRLTQENESAKEEVKEVLQALEELA 454 (720)
Q Consensus 424 ~lq~el~~lq~e~~~~keevke~~qaleel~ 454 (720)
.+..++..|+++++..++++..+....+++.
T Consensus 981 ~~~~~v~~L~~e~~~l~~~~~~~~ke~~~le 1011 (1080)
T 2dfs_A 981 NATNRVLSLQEEIAKLRKELHQTQTEKKTIE 1011 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444443
No 46
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=91.41 E-value=2.3 Score=35.96 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 424 QLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIK 496 (720)
Q Consensus 424 ~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~ 496 (720)
.+...|..|+.+.+.+.+.+......|++......+...+|..+++.+..+.++|......+......|+.-.
T Consensus 3 ~ikkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeae 75 (81)
T 1ic2_A 3 AIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELAD 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888899999999999999999988899999999999999999999999999999888888877643
No 47
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=91.23 E-value=0.55 Score=35.97 Aligned_cols=47 Identities=28% Similarity=0.361 Sum_probs=43.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy5718 455 VNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNH 501 (720)
Q Consensus 455 ~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~ 501 (720)
..|||--++||.+++|+-.|+.||..-+..+.-|+.|-..+|++-.+
T Consensus 3 asYdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~ 49 (54)
T 1deb_A 3 ASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQ 49 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHH
Confidence 47999999999999999999999999999999999999999988544
No 48
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=90.80 E-value=8 Score=35.01 Aligned_cols=82 Identities=9% Similarity=0.168 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy5718 426 QGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKR 505 (720)
Q Consensus 426 q~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr 505 (720)
+.++..+..++....-++..+..+++++..+|+.-...-.....++..|+..+....-.-.+|+..++.|++-..-.|+-
T Consensus 26 R~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~ 105 (119)
T 3ol1_A 26 RRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKL 105 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333344444444444444444455555443333333445566666666555555566666666666665555544
Q ss_pred HH
Q psy5718 506 IN 507 (720)
Q Consensus 506 ~~ 507 (720)
-.
T Consensus 106 he 107 (119)
T 3ol1_A 106 HE 107 (119)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 49
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=90.29 E-value=2.9 Score=36.95 Aligned_cols=67 Identities=25% Similarity=0.336 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 385 TARRDYEQLQGEMTRLTQENESAKEEV---KELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 385 e~~~l~~ql~~Ei~~~~q~~ekLkeq~---eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
.++-.+.|||.|-..+.+.++-||+.+ +|.++...|++.+...++.++......++.++.++...|.
T Consensus 13 KAMVsnAQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 13 KAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999999999988 7778888888888888888888777777777777655554
No 50
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=90.07 E-value=7 Score=34.26 Aligned_cols=64 Identities=20% Similarity=0.256 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q psy5718 412 KELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLT 475 (720)
Q Consensus 412 eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~ 475 (720)
++.......++..++..+..++.+.+.+.+.+.+....|++-......--.+|..+++.++.|-
T Consensus 36 e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnRriqllE 99 (101)
T 3u59_A 36 EDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333444555566777777777777777777777777777766666655666777777666553
No 51
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=88.63 E-value=2.9 Score=39.01 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q psy5718 461 SQEVETKNKEFETLTEELTLK 481 (720)
Q Consensus 461 ~~e~e~~~~e~~~l~~el~~~ 481 (720)
.++++++.+++..|..++..+
T Consensus 109 ~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 109 AKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444433
No 52
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=87.36 E-value=7.9 Score=34.83 Aligned_cols=41 Identities=24% Similarity=0.369 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy5718 468 NKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINE 508 (720)
Q Consensus 468 ~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e 508 (720)
.+.++.|..|+..+...+.+...|+++|+..+..+.-||+.
T Consensus 70 q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~~~ 110 (121)
T 3mq7_A 70 QKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 110 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHhhh
Confidence 33466666666666667777777777777777777777654
No 53
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=87.34 E-value=6.9 Score=33.47 Aligned_cols=79 Identities=8% Similarity=0.194 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy5718 423 EQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNH 501 (720)
Q Consensus 423 e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~ 501 (720)
+.|+.++..+..++....-++..+..+++.+..+|+.-...-.....++..|+..+....-.-.+|+..++.|++-.+-
T Consensus 3 ~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~f 81 (86)
T 3swk_A 3 RELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAF 81 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666666666677777777766555555555566666666655555555566666665554443
No 54
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=84.27 E-value=24 Score=32.12 Aligned_cols=24 Identities=13% Similarity=0.221 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHH
Q psy5718 422 YEQLQGEMTRLTQENESAKEEVKE 445 (720)
Q Consensus 422 ~e~lq~el~~lq~e~~~~keevke 445 (720)
+..+..+.+.|+...++-.+-..+
T Consensus 43 ~~~l~~Ek~~L~~qL~~E~~~l~e 66 (129)
T 2fxo_A 43 MVSLLQEKNDLQLQVQAEQDNLAD 66 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444555555444444443333
No 55
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=84.21 E-value=30 Score=33.16 Aligned_cols=67 Identities=21% Similarity=0.273 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy5718 442 EVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINE 508 (720)
Q Consensus 442 evke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e 508 (720)
++..+...|+.-.-+..+-+..+.+..-.+..|..|+.........+..+..+|.+..+..-|-.+-
T Consensus 70 e~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~ 136 (168)
T 3o0z_A 70 DYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNN 136 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333344333344444444445555555555555555555555555555555554444444333
No 56
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=84.00 E-value=34 Score=33.50 Aligned_cols=61 Identities=18% Similarity=0.359 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy5718 385 TARRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKE 445 (720)
Q Consensus 385 e~~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke 445 (720)
+....|.+++.+.+........|...|+.-+..+......|+..+.+|..|.+..|.....
T Consensus 21 ~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~ 81 (189)
T 2v71_A 21 KYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEH 81 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566777788888888888888887777777777777777777777777766655443
No 57
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=83.82 E-value=7.5 Score=36.20 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTELQ 493 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el~ 493 (720)
++...++++.+.+++..+...+..|++++.
T Consensus 105 ~e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 105 AESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444443
No 58
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=83.62 E-value=26 Score=38.97 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5718 393 LQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAK 440 (720)
Q Consensus 393 l~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~k 440 (720)
+|.++..++.++++.+..-....+.-+..+...|.+...+++||++.+
T Consensus 7 yq~~la~yq~elarvqkana~aka~Ye~~~ae~~a~n~~i~aeNeaik 54 (497)
T 3iox_A 7 YQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAENTAIK 54 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 444555555555555555544455545555555555555555555555
No 59
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=82.47 E-value=7.3 Score=35.47 Aligned_cols=51 Identities=20% Similarity=0.273 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy5718 395 GEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKE 445 (720)
Q Consensus 395 ~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke 445 (720)
..|..+..+++.|+..++.+...+.+....|...++.|..+++..+-.+..
T Consensus 15 ~~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~ 65 (120)
T 3i00_A 15 HLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQ 65 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777777777777778888888888888888888887777654433
No 60
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=82.31 E-value=18 Score=34.11 Aligned_cols=52 Identities=19% Similarity=0.145 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy5718 460 KSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEMLT 511 (720)
Q Consensus 460 ~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~ 511 (720)
|++.++..+-|+..|.-++.....++..++.|...|=+-.-.++-+=++-||
T Consensus 94 K~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~qEAe~MN 145 (152)
T 3a7p_A 94 KNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTEKETEAMN 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444455555555555555555555554444444444444444444
No 61
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=82.10 E-value=16 Score=33.31 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhh
Q psy5718 423 EQLQGEMTRLTQENESAKEEVKEVLQALEELAVNY 457 (720)
Q Consensus 423 e~lq~el~~lq~e~~~~keevke~~qaleel~~n~ 457 (720)
-++...+..|+.+.++.+....-++..|.+....|
T Consensus 39 ~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~ 73 (129)
T 3tnu_B 39 SEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRG 73 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444444444444
No 62
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=81.75 E-value=51 Score=33.94 Aligned_cols=13 Identities=0% Similarity=0.089 Sum_probs=7.2
Q ss_pred hhCCCCCCcchhh
Q psy5718 579 SIAPTPESAPASI 591 (720)
Q Consensus 579 ~~~~~~~~~~~~~ 591 (720)
.-+.+|+..+|.|
T Consensus 191 ~lr~~l~~~~e~l 203 (273)
T 3s84_A 191 DVRGNLRGNTEGL 203 (273)
T ss_dssp HHHHTSSSCHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344566666666
No 63
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=81.20 E-value=23 Score=30.00 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy5718 470 EFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEML 510 (720)
Q Consensus 470 e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~ 510 (720)
++..|..+..+..+.-..|..|.++|++--+.-..||..++
T Consensus 35 kN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 35 KNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333444444444444444444444433
No 64
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=80.58 E-value=11 Score=36.44 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=83.1
Q ss_pred chhhhHHHHHHHhhhhhhHhhHhhhhcccccchhHHHHhhhCCCCCCcchhhcccCccccccccccchH----HhhhHHH
Q psy5718 540 LEEEFTVARLYISKMKWRNGETVKEDEQVNLADPVDMAASIAPTPESAPASILPAIPGSGLMLGSLSNE----ERQKLEE 615 (720)
Q Consensus 540 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 615 (720)
.|.=-++++-|||+++.=.+..|..-.+-+|+.- -+..+.++.|.+..-.......|.-+..+ .....++
T Consensus 9 ~e~v~~~~w~Y~~~l~~~a~~~ve~l~~seL~qq------L~~~l~e~~~~l~~~~~~l~~~l~p~~~e~~~~l~~~~~~ 82 (185)
T 3r2p_A 9 WDRVKDLATVYVDVLKDSGRDYVSQFEGSALGKQ------LNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEG 82 (185)
T ss_dssp THHHHHHHHHHTHHHHHHHHHHHHHHHHSHHHHH------TTCCCCTTCSCSSCHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHH------HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 5777889999999999999988887665444322 24455556665511111101010111111 1133444
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhhhcccccccchhHHHHHHhhhccchH---hHHHHHH-----Hhh
Q psy5718 616 ERERLYQQLDEKDEEINQQSQYA-EKLKEQIMEQEEVSGLLVCGQTNERREQARKDLKGLED---TVTKELQ-----TLH 686 (720)
Q Consensus 616 ~~~~~~~q~~~lrdei~~k~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---tv~~el~-----~l~ 686 (720)
++..|.+.|+.+|..+.-.-..+ .++...+++.. .+|. -+..+-|++++++...|-. +++.+|+ .+-
T Consensus 83 Lr~~l~kdlee~r~~l~P~~~e~~~~~~~~~e~lr--~~l~--Py~~el~~~~~~~~e~Lr~~L~p~~e~lr~~l~~~~e 158 (185)
T 3r2p_A 83 LRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYR--QKVE--PLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVD 158 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH--HHHHHHHHHHHHHHTTTTTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777776666665554444 23333211111 1222 2445667777766655554 4445554 345
Q ss_pred hhHHHH---HHHHHhhhhcC
Q psy5718 687 NLRKLF---VQDQVTSSQRW 703 (720)
Q Consensus 687 ~l~~~~---~~~~~~~~~~~ 703 (720)
+||..| ++++.+.+-..
T Consensus 159 ~lk~~l~Py~ee~k~kl~~~ 178 (185)
T 3r2p_A 159 ALRTHLAPYSDELRQRLAAR 178 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHHHH
Confidence 566664 67777766443
No 65
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=79.13 E-value=31 Score=29.94 Aligned_cols=79 Identities=18% Similarity=0.242 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 419 RRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKD 497 (720)
Q Consensus 419 ~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~ 497 (720)
..+-.++..+|..|..+.+....++..+...++.|...-.+.-.+.-....+.-...+++.+..+.+.-.+..|..|+.
T Consensus 17 ~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~qLdkL~K 95 (96)
T 3q8t_A 17 ALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKK 95 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333455555556666666666666666666666666555666666666666777777777777777777777766653
No 66
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=78.87 E-value=17 Score=33.32 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy5718 415 ITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQ 448 (720)
Q Consensus 415 l~~~~~~~e~lq~el~~lq~e~~~~keevke~~q 448 (720)
+...++.+..|+.++..++.-+.++...+.|+.+
T Consensus 40 i~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~ 73 (131)
T 3tnu_A 40 ISELRRTMQNLEIELQSQLSMKASLENSLEETKG 73 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3333444444444444444444444444444333
No 67
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=78.34 E-value=38 Score=30.41 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy5718 418 ARRDYEQLQGEMTRLTQENESAKEEVKEVLQA 449 (720)
Q Consensus 418 ~~~~~e~lq~el~~lq~e~~~~keevke~~qa 449 (720)
++-+.++||.++.++++..++..++-++++..
T Consensus 4 t~~~~~~lq~~~~ql~~qL~k~~~~r~~Le~~ 35 (112)
T 1x79_B 4 TRDQVKKLQLMLRQANDQLEKTMKDKQELEDF 35 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666666666666666666664443
No 68
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=76.93 E-value=51 Score=31.18 Aligned_cols=81 Identities=22% Similarity=0.361 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhh-hhhhhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 418 ARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVN-YDQKSQEVET-------KNKEFETLTEELTLKQTTLNTTS 489 (720)
Q Consensus 418 ~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n-~d~~~~e~e~-------~~~e~~~l~~el~~~~~~~~~l~ 489 (720)
...++.+|+.++.+-+..-..+..+...+.+.||+|... |++-+.=|.+ ....++.|...+..+...+.+++
T Consensus 56 ~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq 135 (154)
T 2ocy_A 56 RDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLREKDTLLDTLT 135 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555544444445555555555666665432 3443333333 34556667788888888888888
Q ss_pred HHHHHHHHH
Q psy5718 490 TELQQIKDM 498 (720)
Q Consensus 490 ~el~~l~~~ 498 (720)
.+|..||.+
T Consensus 136 ~ql~~LK~v 144 (154)
T 2ocy_A 136 LQLKNLKKV 144 (154)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 888888765
No 69
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=76.03 E-value=24 Score=29.88 Aligned_cols=69 Identities=23% Similarity=0.239 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 409 EEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTT 488 (720)
Q Consensus 409 eq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l 488 (720)
++++..+..+-..+.-+|.++..|+++|..+..++.++.. ..+.+..+++.|.+|.......+.+|
T Consensus 9 eqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~--------------~~~~L~~en~qLk~E~~~wq~Rl~~L 74 (81)
T 2jee_A 9 EKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQH--------------QREELERENNHLKEQQNGWQERLQAL 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555566677777777777777666665332 34467778888888888887777777
Q ss_pred HHH
Q psy5718 489 STE 491 (720)
Q Consensus 489 ~~e 491 (720)
-..
T Consensus 75 Lgk 77 (81)
T 2jee_A 75 LGR 77 (81)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 70
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=75.69 E-value=39 Score=29.16 Aligned_cols=77 Identities=22% Similarity=0.312 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhh---------------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 421 DYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYD---------------QKSQEVETKNKEFETLTEELTLKQTTL 485 (720)
Q Consensus 421 ~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d---------------~~~~e~e~~~~e~~~l~~el~~~~~~~ 485 (720)
.|.+++.++..+.......+.++.+..-++++|..--+ ........+.+..+.+..++..+....
T Consensus 9 ~f~~lq~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG~vfv~~~~~e~~~~L~~~~e~i~~~i~~le~~~ 88 (107)
T 1fxk_A 9 QFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQE 88 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHhHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777777777777777777777777777755322 223345666666777777777777777
Q ss_pred HHHHHHHHHHHH
Q psy5718 486 NTTSTELQQIKD 497 (720)
Q Consensus 486 ~~l~~el~~l~~ 497 (720)
..++.++.+++.
T Consensus 89 ~~~~~~l~~lk~ 100 (107)
T 1fxk_A 89 ERVMKKLQEMQV 100 (107)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777766664
No 71
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=75.36 E-value=27 Score=32.90 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy5718 443 VKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQ 502 (720)
Q Consensus 443 vke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~ 502 (720)
+..+...+..+...+.+-..++++|.+-++.+.+|+..++-.++.++..+..|++-...-
T Consensus 70 I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~L 129 (152)
T 3a7p_A 70 LAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQL 129 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444445555568999999999999999999999999999888888765443
No 72
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=75.11 E-value=47 Score=29.87 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHH
Q psy5718 465 ETKNKEFETLTEELT 479 (720)
Q Consensus 465 e~~~~e~~~l~~el~ 479 (720)
.++..+++.|.+|+.
T Consensus 86 ~dLE~~iesL~eEl~ 100 (119)
T 3ol1_A 86 LDLERKVESLQEEIA 100 (119)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555555544
No 73
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=75.08 E-value=42 Score=29.31 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 427 GEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTST 490 (720)
Q Consensus 427 ~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~ 490 (720)
..|.-|+.+.+.+.+.+......+........+.-.+|..+++.++.+..+|......+.....
T Consensus 9 kKm~~lk~e~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~ 72 (101)
T 3u1c_A 9 KKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSED 72 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555555555555555555555555666666666665555555444444433
No 74
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=75.05 E-value=36 Score=28.46 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q psy5718 412 KELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVN 456 (720)
Q Consensus 412 eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n 456 (720)
+........++..|+..+..+..+.+.+.+.+.+....|++-...
T Consensus 33 e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeaek~ 77 (81)
T 1ic2_A 33 EERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKK 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556667777888888888888888888888888888765443
No 75
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=74.76 E-value=43 Score=29.29 Aligned_cols=76 Identities=21% Similarity=0.303 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhh---------------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 421 DYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYD---------------QKSQEVETKNKEFETLTEELTLKQTTL 485 (720)
Q Consensus 421 ~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d---------------~~~~e~e~~~~e~~~l~~el~~~~~~~ 485 (720)
.|..++.++..+.......+.++.+..-++++|..--+ .....+..+.+..+.+..++..+...+
T Consensus 14 ~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~~ 93 (117)
T 2zqm_A 14 QLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEVRLNALERQE 93 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777777777777777777777777777754322 223335555555555555555555555
Q ss_pred HHHHHHHHHHH
Q psy5718 486 NTTSTELQQIK 496 (720)
Q Consensus 486 ~~l~~el~~l~ 496 (720)
..+..++++++
T Consensus 94 ~~l~~~l~~lk 104 (117)
T 2zqm_A 94 KKLNEKLKELT 104 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555554
No 76
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=74.11 E-value=49 Score=29.65 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q psy5718 392 QLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEF 471 (720)
Q Consensus 392 ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~ 471 (720)
+|+.+..+.....+++...-.++...-....+.-..++..|+.....+...++++.++|.....+.- .++..+...-
T Consensus 10 ~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq---~qL~~Lt~~R 86 (112)
T 1x79_B 10 KLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQ---EQMAVLMQSR 86 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 3333333333344444333344444445555666778888888888888888888888876443322 2233333344
Q ss_pred HHHHHHHHHHHHHHHH
Q psy5718 472 ETLTEELTLKQTTLNT 487 (720)
Q Consensus 472 ~~l~~el~~~~~~~~~ 487 (720)
+.+..+|..++..+..
T Consensus 87 e~V~~eL~rLQ~eNd~ 102 (112)
T 1x79_B 87 EQVSEELVRLQKDNDS 102 (112)
T ss_dssp HHHHTC----------
T ss_pred HHHHHHHHHHHhhccc
Confidence 4444444444443333
No 77
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=72.34 E-value=24 Score=31.01 Aligned_cols=42 Identities=29% Similarity=0.407 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH--HHhhhhh
Q psy5718 418 ARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEE--LAVNYDQ 459 (720)
Q Consensus 418 ~~~~~e~lq~el~~lq~e~~~~keevke~~qalee--l~~n~d~ 459 (720)
+...|..+..++..|..|++.+.+++..++..|+. |.-.||.
T Consensus 10 ~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~ 53 (100)
T 1go4_E 10 SREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQ 53 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Confidence 44578889999999999999999999999999887 3345655
No 78
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=70.73 E-value=16 Score=31.06 Aligned_cols=50 Identities=18% Similarity=0.314 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy5718 462 QEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEMLTN 512 (720)
Q Consensus 462 ~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~~ 512 (720)
..+.+--.||+.|.+++..+...+..|..|+..|+++..|-+ ..+.|+..
T Consensus 31 ~AL~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~elA~~~q-~la~~i~~ 80 (83)
T 1wlq_A 31 KALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQ-YMAEVIER 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 345666778999999999999999999999999999987743 55555443
No 79
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=70.05 E-value=50 Score=28.07 Aligned_cols=75 Identities=12% Similarity=0.247 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 423 EQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKD 497 (720)
Q Consensus 423 e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~ 497 (720)
+.+..+..++..+...++..+.++...+|+-...-..---++..+++.......--..+.+++.+|..|+.=||.
T Consensus 10 ~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~fLkk 84 (86)
T 3swk_A 10 DQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKK 84 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444555555555555555555555544222212222345666777777777777777777778777776653
No 80
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=70.00 E-value=55 Score=28.51 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy5718 421 DYEQLQGEMTRLTQENESAKEEVKEVLQALEELA 454 (720)
Q Consensus 421 ~~e~lq~el~~lq~e~~~~keevke~~qaleel~ 454 (720)
.++.+..++..|+.+....+.++.++..++..+.
T Consensus 11 ~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l~ 44 (112)
T 1l8d_A 11 KKTTIEEERNEITQRIGELKNKIGDLKTAIEELK 44 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344455555555555555566666666666554
No 81
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=68.40 E-value=48 Score=29.55 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy5718 387 RRDYEQLQGEMTRLTQ---ENESAKEEV---KELITTARRDYEQLQGEMTRLTQENESAKEEV 443 (720)
Q Consensus 387 ~~l~~ql~~Ei~~~~q---~~ekLkeq~---eell~~~~~~~e~lq~el~~lq~e~~~~keev 443 (720)
+.++..+..++.+... .+.-|++|+ +.-...-+.+.|+++.+..+|+++++.+.-++
T Consensus 44 q~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~ 106 (110)
T 2v4h_A 44 QELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREF 106 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHH
Confidence 3333334444443333 455667777 56666677788888888888887777665443
No 82
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=67.81 E-value=53 Score=36.75 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 466 TKNKEFETLTEELTLKQTTLNTT 488 (720)
Q Consensus 466 ~~~~e~~~l~~el~~~~~~~~~l 488 (720)
++++.++.|.+++....+.+..|
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvL 136 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLL 136 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666655444333333
No 83
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=67.79 E-value=10 Score=36.32 Aligned_cols=90 Identities=9% Similarity=0.062 Sum_probs=54.0
Q ss_pred cchhhhHHHHHHHhhhhhhHhhHhhhhcccc--------cchhHHHHhhhCCCCCCcchhhcccCccccccccccchHHh
Q psy5718 539 KLEEEFTVARLYISKMKWRNGETVKEDEQVN--------LADPVDMAASIAPTPESAPASILPAIPGSGLMLGSLSNEER 610 (720)
Q Consensus 539 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (720)
-+|.=-++++.|++++|.-.+..|..-.+-+ |+++|.++-.....|.+.+.-+- ..+.....
T Consensus 25 ~le~v~~~~w~Y~~q~~~~a~~~v~ql~~sel~qel~~~l~~~ld~l~~~~~~l~~~L~P~t----------~el~~~l~ 94 (165)
T 1gs9_A 25 RWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVA----------EETRARLS 94 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCC----------SHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH----------HHHHHHHH
Confidence 3566667899999999998888887655433 45555555444222222211110 11122223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q psy5718 611 QKLEEERERLYQQLDEKDEEINQQSQYA 638 (720)
Q Consensus 611 ~~~~~~~~~~~~q~~~lrdei~~k~~~~ 638 (720)
...+.++..|...|+.+|+.+..+-..+
T Consensus 95 ~~~e~Lr~~L~~d~EelR~~l~p~~~el 122 (165)
T 1gs9_A 95 KELQAAQARLGADMEDVRGRLVQYRGEV 122 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555688888888888888877765544
No 84
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=67.75 E-value=36 Score=31.52 Aligned_cols=78 Identities=22% Similarity=0.337 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhh-hhhhhHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 422 YEQLQGEMTRLTQENESAKEEVKEVLQALEELAVN-YDQKSQEV-------ETKNKEFETLTEELTLKQTTLNTTSTELQ 493 (720)
Q Consensus 422 ~e~lq~el~~lq~e~~~~keevke~~qaleel~~n-~d~~~~e~-------e~~~~e~~~l~~el~~~~~~~~~l~~el~ 493 (720)
+.+|+.++.+-+..-..+..+...+.+.||+|... |++-+.=| ....+.++.|...+..+..-+.+++..|.
T Consensus 48 ~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~LTasLFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~e~ll~~lq~QL~ 127 (135)
T 2e7s_A 48 VKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNLVADARMEKYAIEILNKRLTEQLREKDMLLDTLTLQLK 127 (135)
T ss_dssp HHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTTHHHHCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444433333333444444444445554322 33333333 33455666777777778888888888888
Q ss_pred HHHHHH
Q psy5718 494 QIKDMS 499 (720)
Q Consensus 494 ~l~~~~ 499 (720)
.||-+.
T Consensus 128 ~LK~v~ 133 (135)
T 2e7s_A 128 NLKKVM 133 (135)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 887654
No 85
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=66.94 E-value=65 Score=28.14 Aligned_cols=53 Identities=19% Similarity=0.382 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhh-hhhhhHHHHHHHHH
Q psy5718 418 ARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVN-YDQKSQEVETKNKE 470 (720)
Q Consensus 418 ~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n-~d~~~~e~e~~~~e 470 (720)
...++.+|+.++.+-+..-..+..+...+.+.||+|... |++-+.=|.+-+++
T Consensus 24 ~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e 77 (97)
T 2eqb_B 24 RDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKE 77 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555555555555555556655332 34444334443333
No 86
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=66.41 E-value=1.6e+02 Score=32.68 Aligned_cols=58 Identities=21% Similarity=0.301 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy5718 388 RDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKE 445 (720)
Q Consensus 388 ~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke 445 (720)
..+..++.|+.+.+..+...++.-+.-++........+..|...++.+|+.+|.....
T Consensus 9 ~~la~yq~elarvqkana~aka~Ye~~~ae~~a~n~~i~aeNeaikkrNa~aka~Ye~ 66 (497)
T 3iox_A 9 AKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAENTAIKKRNADAKADYEA 66 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677788888888888888888888888888888888888888888888766543
No 87
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=64.59 E-value=56 Score=36.60 Aligned_cols=15 Identities=33% Similarity=0.246 Sum_probs=5.6
Q ss_pred HHHHHHhhHHHHHHH
Q psy5718 432 LTQENESAKEEVKEV 446 (720)
Q Consensus 432 lq~e~~~~keevke~ 446 (720)
|......+|++|...
T Consensus 115 LRRrIqyLKekVdnQ 129 (562)
T 3ghg_A 115 LRSRIEVLKRKVIEK 129 (562)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 88
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=64.52 E-value=1.2e+02 Score=30.45 Aligned_cols=39 Identities=10% Similarity=0.264 Sum_probs=23.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q psy5718 432 LTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKE 470 (720)
Q Consensus 432 lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e 470 (720)
+.+....+..++.+....++....+|++..++++.....
T Consensus 121 ~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~ 159 (305)
T 2efl_A 121 NFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQY 159 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555556666666677777777666655443
No 89
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=64.41 E-value=1.8e+02 Score=32.26 Aligned_cols=15 Identities=20% Similarity=0.166 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHH
Q psy5718 381 KLITTARRDYEQLQG 395 (720)
Q Consensus 381 k~~ee~~~l~~ql~~ 395 (720)
++...+...+++|.+
T Consensus 93 k~q~~V~~~LqeLe~ 107 (464)
T 1m1j_B 93 KQEKTVKPVLRDLKD 107 (464)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HhhhhhHhHHHHHHH
Confidence 444443333333333
No 90
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=64.31 E-value=72 Score=27.69 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 428 EMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTEL 492 (720)
Q Consensus 428 el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el 492 (720)
.|.-|+.+.+.+.+.+......+........+.-.++..+++.+..+..++......+......|
T Consensus 10 Km~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kL 74 (101)
T 3u59_A 10 KMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKL 74 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444555555555555555555554444444444333
No 91
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=63.70 E-value=87 Score=28.43 Aligned_cols=46 Identities=24% Similarity=0.295 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhh
Q psy5718 413 ELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYD 458 (720)
Q Consensus 413 ell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d 458 (720)
+.+..++.+.-++...+..|+.++++.+....-++..+.+....|.
T Consensus 31 ~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~ 76 (131)
T 3tnu_A 31 ELVQSGKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYC 76 (131)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3344555566666667777777777776666666666666555554
No 92
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=62.29 E-value=80 Score=27.57 Aligned_cols=58 Identities=28% Similarity=0.397 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy5718 421 DYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEEL 478 (720)
Q Consensus 421 ~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el 478 (720)
.|+.+..++.+|+.++.....++..+...|.+-...=..--.+......|++.|+..|
T Consensus 6 ~~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 6 NYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASL 63 (97)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666655555433333333334444555555555544
No 93
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=60.77 E-value=21 Score=30.08 Aligned_cols=50 Identities=18% Similarity=0.314 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy5718 462 QEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEMLTN 512 (720)
Q Consensus 462 ~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~~ 512 (720)
..+.+--.||..|..++.++...++.|..|...|+++..|-+ ..++++..
T Consensus 27 ~AL~eaL~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~~-~laevl~~ 76 (79)
T 2zxx_A 27 KALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQ-YMAEVIER 76 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 445666778999999999999999999999999999887754 44554443
No 94
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=60.67 E-value=97 Score=33.77 Aligned_cols=78 Identities=15% Similarity=0.302 Sum_probs=45.2
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy5718 431 RLTQENESAKEEVKEVLQALEELAVNYDQKSQE--VETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINE 508 (720)
Q Consensus 431 ~lq~e~~~~keevke~~qaleel~~n~d~~~~e--~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e 508 (720)
.+-.+.+.+..++.++.+++...- +=+|+... .+...+....+.+++....+.+....+++..|+.....+..+|..
T Consensus 45 ~~l~elsn~ts~v~~Lvk~iq~~~-~~~Q~~~~d~~e~~tq~skkml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~ 123 (409)
T 1m1j_C 45 GLLQQATNSTGSIEYLIQHIKTIY-PSEKQTLPQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQ 123 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-CSSTTCCSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-ccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHH
Confidence 333445555556666666665541 11222111 233355555666677767777777777777777777777777776
Q ss_pred H
Q psy5718 509 M 509 (720)
Q Consensus 509 ~ 509 (720)
+
T Consensus 124 l 124 (409)
T 1m1j_C 124 L 124 (409)
T ss_dssp H
T ss_pred H
Confidence 4
No 95
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=58.89 E-value=53 Score=27.83 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 425 LQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTT 488 (720)
Q Consensus 425 lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l 488 (720)
.|.++..|-.+++.+..++.++...|-. ..-|.+....+..+..+++.+..+|..+...+..|
T Consensus 20 eqrEle~le~~Ie~LE~~i~~le~~lad-p~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeL 82 (89)
T 2lw1_A 20 LQRELEQLPQLLEDLEAKLEALQTQVAD-ASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYL 82 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS-TTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555566666666666666665554432 12244555677778888888888888888777655
No 96
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=58.37 E-value=69 Score=28.22 Aligned_cols=51 Identities=20% Similarity=0.304 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5718 429 MTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELT 479 (720)
Q Consensus 429 l~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~ 479 (720)
-+.+.=+.+-+|+.+-|....+.++...|..|+.+++..+..+..|..++.
T Consensus 25 Ksal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~ 75 (103)
T 4h22_A 25 KTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFA 75 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444444444444444444444444444444444433
No 97
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=58.30 E-value=38 Score=33.27 Aligned_cols=50 Identities=20% Similarity=0.319 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEMLTNLL 514 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~~l~ 514 (720)
+.+--.||+.|.+++..+...+..|..|+..|+++..|-. .+++|+..|+
T Consensus 110 L~eaLeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q-~la~vi~~l~ 159 (209)
T 2wvr_A 110 LYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQ-YMAELIERLN 159 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 5555678889999999999999999999999999877654 6677766664
No 98
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=58.04 E-value=1.3e+02 Score=28.48 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy5718 484 TLNTTSTELQQIKDMSNHQKKRINEM 509 (720)
Q Consensus 484 ~~~~l~~el~~l~~~~~~~~kr~~e~ 509 (720)
.+.-|+.++..|-+.....|.+...+
T Consensus 99 sv~kLEk~id~lEd~L~~~Kek~~~i 124 (155)
T 2efr_A 99 SVTKLEKSIDDLEDELYAQKLKYKAI 124 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555544444444443333
No 99
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=57.30 E-value=1.4e+02 Score=28.64 Aligned_cols=18 Identities=22% Similarity=0.470 Sum_probs=8.0
Q ss_pred hHHHHHhhhhHHHHHHHH
Q psy5718 336 QKISFLENNLDQLTKVHK 353 (720)
Q Consensus 336 qki~~le~~Le~L~~~~~ 353 (720)
+||..|+..|+.+....+
T Consensus 6 eKi~~LekQL~E~n~kLk 23 (168)
T 3o0z_A 6 EKLSQLQKQLEEANDLLR 23 (168)
T ss_dssp ----CTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455557766665554444
No 100
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=55.91 E-value=58 Score=25.85 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 462 QEVETKNKEFETLTEELTLKQTTLNTTSTELQQIK 496 (720)
Q Consensus 462 ~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~ 496 (720)
..+..+-+=+..|++||.-++..+..|++|-..|+
T Consensus 27 AkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 27 AKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 34666777788999999999999999999988876
No 101
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=54.53 E-value=1.3e+02 Score=32.68 Aligned_cols=9 Identities=11% Similarity=0.228 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q psy5718 489 STELQQIKD 497 (720)
Q Consensus 489 ~~el~~l~~ 497 (720)
+.+.+++++
T Consensus 441 ~~~~~~~~~ 449 (487)
T 3oja_A 441 QHKETQLAE 449 (487)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 333333333
No 102
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=54.24 E-value=1.1e+02 Score=26.51 Aligned_cols=69 Identities=20% Similarity=0.233 Sum_probs=43.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 430 TRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 430 ~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
..++.++..++.+-.++.+.|+++..+...-..+++.+..+.+.|..+-.+.-..-+++..++-.+.+-
T Consensus 7 ~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE 75 (96)
T 3q8t_A 7 EQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDE 75 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666666777777777777777777777777777666555555555555555544443
No 103
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=54.24 E-value=1.3e+02 Score=27.28 Aligned_cols=43 Identities=19% Similarity=0.338 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 391 EQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLT 433 (720)
Q Consensus 391 ~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq 433 (720)
..|..++..+..+++.++....-.+.+.+.-.-.|+.++..-.
T Consensus 18 e~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 18 ERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQ 60 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444443333333333334444444333
No 104
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=54.06 E-value=73 Score=26.14 Aligned_cols=35 Identities=29% Similarity=0.335 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 463 EVETKNKEFETLTEELTLKQTTLNTTSTELQQIKD 497 (720)
Q Consensus 463 e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~ 497 (720)
.+.-+++-.+.|.+|+....-+++=|+..|+.|+.
T Consensus 40 ~i~lk~kd~ErLNDEiislNIENNlL~~rl~~l~~ 74 (75)
T 3a7o_A 40 VIALKNKNTERLNDELISGTIENNVLQQKLSDLKK 74 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHhcccHHHhhHHHHHhHHHHHHHHHHHHHHhc
Confidence 34556778888999999888888888888877764
No 105
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=53.99 E-value=21 Score=25.42 Aligned_cols=30 Identities=23% Similarity=0.370 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 469 KEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 469 ~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
.|++.|..++..|...+..|..|-.+|++.
T Consensus 7 ~ENekLhk~ie~KdeeIa~Lk~eN~eL~El 36 (37)
T 1t6f_A 7 KENEKLHKEIEQKDNEIARLKKENKELAEV 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhh
Confidence 567777777777777777777777777654
No 106
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=53.43 E-value=1.1e+02 Score=26.32 Aligned_cols=73 Identities=18% Similarity=0.364 Sum_probs=36.5
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy5718 370 EKRLRATMERVKLITTARRDYEQLQGEMTRLTQE-NESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKE 445 (720)
Q Consensus 370 ~~~~~~~~Er~k~~ee~~~l~~ql~~Ei~~~~q~-~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke 445 (720)
-.+..+.-++|+++|...+. |..++....+. ...+..-.+..+...++..+.+..+..++..+.....+++.+
T Consensus 15 NdRlAsyIdKVR~LEqqN~~---Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~ 88 (93)
T 3s4r_A 15 NDRFANLIDKVRFLEQQNKI---LLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMR 88 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466778888888876555 34444433321 122222224444444555555555555555444444444444
No 107
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=52.72 E-value=2.7e+02 Score=30.61 Aligned_cols=27 Identities=15% Similarity=0.132 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHH
Q psy5718 439 AKEEVKEVLQALEELAVNYDQKSQEVE 465 (720)
Q Consensus 439 ~keevke~~qaleel~~n~d~~~~e~e 465 (720)
+...+......|+....+|++..++.+
T Consensus 141 ~qk~l~~~~~~l~KaKk~Y~~~cke~e 167 (486)
T 3haj_A 141 AQKPWAKKLKEVEAAKKAHHAACKEEK 167 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444445555555555555433
No 108
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=52.49 E-value=1.3e+02 Score=27.06 Aligned_cols=39 Identities=15% Similarity=0.246 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 413 ELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 413 ell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
+.+...++.+..|+.++..++.-+.++...+.|+.+..+
T Consensus 36 ~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~ 74 (129)
T 3tnu_B 36 HEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGE 74 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 334444455555555555555555555555555554443
No 109
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=51.17 E-value=1.3e+02 Score=26.56 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy5718 420 RDYEQLQGEMTRLTQENESAKEEVKEVLQALEEL 453 (720)
Q Consensus 420 ~~~e~lq~el~~lq~e~~~~keevke~~qaleel 453 (720)
.+.+.....+..++.+++...++|..+-..++..
T Consensus 47 ~k~~eq~~~le~lk~eL~~~~~el~~lq~~l~~~ 80 (107)
T 2no2_A 47 RKTQEQLEVLESLKQELATSQRELQVLQGSLETS 80 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445566667777777777777655555443
No 110
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=50.82 E-value=21 Score=27.72 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 419 RRDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 419 ~~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
..+++.|+.++..|+.+++.+++++.|+...|+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467788888888888888888877777666654
No 111
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=50.31 E-value=47 Score=26.51 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
.+++..+.+.|..+-..+...+..|+.|+..|+.+
T Consensus 25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 25 QEALTGECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444455555555555443
No 112
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=49.38 E-value=49 Score=28.03 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 388 RDYEQLQGEMTRLTQENESAKEEV 411 (720)
Q Consensus 388 ~l~~ql~~Ei~~~~q~~ekLkeq~ 411 (720)
+.+.++...|..+...+..|..+|
T Consensus 22 rEle~le~~Ie~LE~~i~~le~~l 45 (89)
T 2lw1_A 22 RELEQLPQLLEDLEAKLEALQTQV 45 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777777777777776666
No 113
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=49.07 E-value=2.9e+02 Score=29.95 Aligned_cols=28 Identities=11% Similarity=0.133 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy5718 481 KQTTLNTTSTELQQIKDMSNHQKKRINE 508 (720)
Q Consensus 481 ~~~~~~~l~~el~~l~~~~~~~~kr~~e 508 (720)
.......+..|-+.++.....-.+.|.+
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (487)
T 3oja_A 440 YQHKETQLAEENARLKKLNGEADLALAS 467 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhhhhhhhhhhhhhhHh
Confidence 3333344444444444444444444444
No 114
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=47.59 E-value=1.2e+02 Score=25.32 Aligned_cols=57 Identities=14% Similarity=0.193 Sum_probs=42.5
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy5718 453 LAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEM 509 (720)
Q Consensus 453 l~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~ 509 (720)
+...+.|.+.|++.+++..+.|...-..+..-+..|+.|-..+....+..+++..||
T Consensus 16 l~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL 72 (78)
T 3iv1_A 16 MKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEEL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677777777777777777777777777778888888887777777777774
No 115
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=47.16 E-value=53 Score=27.86 Aligned_cols=39 Identities=21% Similarity=0.303 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQ 502 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~ 502 (720)
+.+--.||+.|.+.+..+...+..+..++..|+++..|-
T Consensus 41 L~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae~~ 79 (83)
T 1uii_A 41 LYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHV 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566788888888888888999999999998887663
No 116
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.21 E-value=47 Score=27.46 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 461 SQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 461 ~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
..++..+...++.|..+|.++...+..|+.+|.+++.+
T Consensus 32 ~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrSV 69 (72)
T 3nmd_A 32 IEELRQRDALIDELELELDQKDELIQMLQNELDKYRSV 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33455555566666677777777777777777776543
No 117
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=46.05 E-value=1.1e+02 Score=27.39 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhhhhhhHHHH
Q psy5718 446 VLQALEELAVNYDQKSQEVE 465 (720)
Q Consensus 446 ~~qaleel~~n~d~~~~e~e 465 (720)
..+.++++...||.+.|+++
T Consensus 66 ~e~E~ae~k~KYD~~lqe~e 85 (115)
T 3vem_A 66 LERKMAEVQAEFRRKFHEVE 85 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34447777777888877765
No 118
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=45.77 E-value=63 Score=32.47 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy5718 413 ELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVET 466 (720)
Q Consensus 413 ell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~ 466 (720)
..+...+.++..+.+.+.++++|..+....+-++.+++.++-.-||..+-|+..
T Consensus 171 ~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (228)
T 3q0x_A 171 FRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHLLEVQA 224 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeec
Confidence 334444556677788888889999999999999999999999999988877543
No 119
>2lem_A Apolipoprotein A-I; lipid transport; NMR {Mus musculus}
Probab=45.71 E-value=78 Score=31.18 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=26.8
Q ss_pred chhhhHHHHHHHhhhhhhHhhHhhhhcccccchhH
Q psy5718 540 LEEEFTVARLYISKMKWRNGETVKEDEQVNLADPV 574 (720)
Q Consensus 540 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (720)
.|.=-++++-|||+++.=.+..|..-.+-+|+.-+
T Consensus 7 ~e~v~~~~w~Y~~~l~~~a~~~v~~l~~sel~qqL 41 (216)
T 2lem_A 7 WDKVKDFANVYVDAVKDSGRDYVSQFESSSLGQQL 41 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 45667889999999999999998887665554333
No 120
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=44.73 E-value=1.3e+02 Score=24.79 Aligned_cols=63 Identities=21% Similarity=0.254 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 426 QGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQI 495 (720)
Q Consensus 426 q~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l 495 (720)
..++..+..+|...++.|..+.+.|++ ...+=+..+.++..+.+-|.-|--.|.++...|+.|
T Consensus 6 ~~kLq~~E~~N~~Le~~v~~le~~Le~-------s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~LakL 68 (72)
T 3cve_A 6 HMKLQEVEIRNKDLEGQLSEMEQRLEK-------SQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAKL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 344444444555555555554444442 111222333444444444444444444444444443
No 121
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=44.28 E-value=3.6e+02 Score=29.76 Aligned_cols=11 Identities=0% Similarity=0.305 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q psy5718 424 QLQGEMTRLTQ 434 (720)
Q Consensus 424 ~lq~el~~lq~ 434 (720)
.++..+...+.
T Consensus 125 ~Iq~slk~~Q~ 135 (464)
T 1m1j_B 125 MIDNKLVKTQK 135 (464)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhhcccc
Confidence 34444444433
No 122
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=44.11 E-value=1.7e+02 Score=25.99 Aligned_cols=14 Identities=21% Similarity=0.249 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHHH
Q psy5718 480 LKQTTLNTTSTELQ 493 (720)
Q Consensus 480 ~~~~~~~~l~~el~ 493 (720)
++...+..|+.+++
T Consensus 94 ~L~~ql~~Lq~q~~ 107 (110)
T 2v4h_A 94 YLQEQLEQLQREFN 107 (110)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444444433
No 123
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=43.62 E-value=3.4e+02 Score=29.22 Aligned_cols=28 Identities=29% Similarity=0.469 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 469 KEFETLTEELTLKQTTLNTTSTELQQIK 496 (720)
Q Consensus 469 ~e~~~l~~el~~~~~~~~~l~~el~~l~ 496 (720)
+.++.|..|+..+..++..+.+++..++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
T 3mq9_A 443 KKVEELEGEITTLNHKLQDASAEVERLR 470 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4555666666666666666666665554
No 124
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=43.35 E-value=2e+02 Score=28.01 Aligned_cols=45 Identities=24% Similarity=0.301 Sum_probs=37.4
Q ss_pred hcccccccchhHHHHHHhhhccchHhHHHHHHHhhhhHHHHHHHH
Q psy5718 652 SGLLVCGQTNERREQARKDLKGLEDTVTKELQTLHNLRKLFVQDQ 696 (720)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~tv~~el~~l~~l~~~~~~~~ 696 (720)
..-.++....+.-+.|+++...+-+.+..||..|+.+|--|+..+
T Consensus 163 kd~~kl~~ae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~ 207 (244)
T 1uru_A 163 KDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRILFLVTN 207 (244)
T ss_dssp TBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 335566677888899999999999999999999999988776544
No 125
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=43.07 E-value=17 Score=37.04 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=28.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 457 YDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 457 ~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
|.+...++..+...++.|.++|.....++..|..|++.|+..
T Consensus 56 l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~sP 97 (251)
T 3m9b_A 56 IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQP 97 (251)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 444455566666667777777777777777777777777654
No 126
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=42.62 E-value=1.8e+02 Score=25.68 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 421 DYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 421 ~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
+.++||.++......+-.|...+++...++|
T Consensus 36 ~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E 66 (107)
T 2k48_A 36 TLQELQENITAHEQQLVTARQKLKDAEKAVE 66 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444455555554455555555555444443
No 127
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=42.53 E-value=3.5e+02 Score=29.08 Aligned_cols=23 Identities=4% Similarity=0.174 Sum_probs=12.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHH
Q psy5718 491 ELQQIKDMSNHQKKRINEMLTNL 513 (720)
Q Consensus 491 el~~l~~~~~~~~kr~~e~~~~l 513 (720)
.|..||....+|+..|..|..-+
T Consensus 135 ~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 135 RINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555556666655554444
No 128
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=41.62 E-value=1.6e+02 Score=24.77 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 426 QGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 426 q~el~~lq~e~~~~keevke~~qale 451 (720)
..++..+..+|...++.|..+.+.|+
T Consensus 12 ~~klq~~E~rN~~Le~~v~~le~~Le 37 (79)
T 3cvf_A 12 QQKVQDLETRNAELEHQLRAMERSLE 37 (79)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 33444444444444444444444443
No 129
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=40.84 E-value=1.4e+02 Score=25.11 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy5718 421 DYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKN 468 (720)
Q Consensus 421 ~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~ 468 (720)
.+..|..++..++.+.+.++.+-.-+...|..+..-.|-|..++-+.+
T Consensus 21 rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elR 68 (79)
T 3cvf_A 21 RNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELR 68 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334444455555555555444433333333333333344444433333
No 130
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=39.18 E-value=1.7e+02 Score=24.58 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTEL 492 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el 492 (720)
+..-..++..|...|..+.+.+.-|+.+|
T Consensus 49 LKsTK~El~~Lq~qLe~kd~ei~rL~~~l 77 (81)
T 3qh9_A 49 LKATKAEVAQLQEQVALKDAEIERLHSQL 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 33334555555555555555555554443
No 131
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=38.58 E-value=92 Score=26.48 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy5718 616 ERERLYQQLDEKDEEINQQSQYAEKLKEQIM 646 (720)
Q Consensus 616 ~~~~~~~q~~~lrdei~~k~~~~~~l~~~~~ 646 (720)
+|+.+..+++.-.++|...+..|++.+..|.
T Consensus 45 LKkkl~~el~~h~~ei~~le~~i~rhk~~i~ 75 (84)
T 1gmj_A 45 LKKHKENEISHHAKEIERLQKEIERHKQSIK 75 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444444433
No 132
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=37.99 E-value=1.6e+02 Score=25.46 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=25.4
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy5718 402 QENESAKEEV---KELITTARRDYEQLQGEMTRLTQENESAKEE 442 (720)
Q Consensus 402 q~~ekLkeq~---eell~~~~~~~e~lq~el~~lq~e~~~~kee 442 (720)
..+.-|++|+ ++-..+-|.+.|+++.+...|+..+..+.-+
T Consensus 40 E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q 83 (94)
T 3jsv_C 40 ETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQRE 83 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4455566666 5556666777777777766666655554443
No 133
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=37.53 E-value=1.3e+02 Score=22.68 Aligned_cols=42 Identities=24% Similarity=0.362 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy5718 411 VKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEE 452 (720)
Q Consensus 411 ~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qalee 452 (720)
++|-.......++-+|.++++|-.|.+++...++--...||.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~ 44 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLES 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555566677888999999999999999888877766663
No 134
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=37.03 E-value=1.2e+02 Score=25.69 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 376 TMERVKLITTARRDYEQLQGEMTRLTQENESAKEEV 411 (720)
Q Consensus 376 ~~Er~k~~ee~~~l~~ql~~Ei~~~~q~~ekLkeq~ 411 (720)
..+|.+++.++..+.+.|.+.|.....++..+++..
T Consensus 34 AE~RR~AL~eaL~EN~~Lh~~ie~l~eEi~~lk~en 69 (83)
T 1uii_A 34 AEKRRKALYEALKENEKLHKEIEQKDNEIARLKKEN 69 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777766666665555555444444444433
No 135
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=36.96 E-value=4.3e+02 Score=28.44 Aligned_cols=53 Identities=11% Similarity=0.194 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy5718 424 QLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTE 476 (720)
Q Consensus 424 ~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~ 476 (720)
.+...+...+.-.....++..++++..+-|..+.+..-..+.-++.-++++..
T Consensus 96 ~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~ 148 (390)
T 1deq_A 96 LMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLV 148 (390)
T ss_pred HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33333333333333333344444444444444444444433333333333333
No 136
>3c98_B Syntaxin-1A; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus}
Probab=36.63 E-value=3.1e+02 Score=26.71 Aligned_cols=86 Identities=10% Similarity=0.119 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHhhhhcCCCcccccCCccccch
Q psy5718 462 QEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEMLTNLLKDLCEIGLVIGSEGDMKVTSDGAGKLE 541 (720)
Q Consensus 462 ~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~~l~~dl~e~~~~~~~~~~~~~~~~~~~~~e 541 (720)
..++....++..+...+......+..+......+.......+ -+++..+.|...+..+....|..
T Consensus 85 ~~~~~~~~~i~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~i~-~~~~qtn~La~n~a~~~a~~~~~-------------- 149 (279)
T 3c98_B 85 EELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLR-IRKTQHSTLSRKFVEVMSEYNAT-------------- 149 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSHHHH-HHHHHHHHHHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 334444455555555544444444444333333333333333 34566777777777776666554
Q ss_pred hhhHHHHHHHhhhhhhHhhHhhhhcc
Q psy5718 542 EEFTVARLYISKMKWRNGETVKEDEQ 567 (720)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (720)
-+-|...++.||+.+..+...
T Consensus 150 -----~~~~~~vva~evr~la~~~~~ 170 (279)
T 3c98_B 150 -----QSDYRERCKGRIQRQLEITGR 170 (279)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHHHHHHHHhhcc
Confidence 344566778888888887754
No 137
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=35.75 E-value=1.8e+02 Score=23.63 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 473 TLTEELTLKQTTLNTTSTELQQIK 496 (720)
Q Consensus 473 ~l~~el~~~~~~~~~l~~el~~l~ 496 (720)
....|+.++...+.+|+.||+.++
T Consensus 53 ~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 53 QAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334444444555555555555543
No 138
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=35.73 E-value=2.2e+02 Score=24.85 Aligned_cols=67 Identities=16% Similarity=0.353 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 384 TTARRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 384 ee~~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
+......+.++..|+.+...+++|...-...+.++..+ ..+..+|..+-.+....-..++.-+.+|+
T Consensus 8 ~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~~~~-~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~ 74 (127)
T 1ez3_A 8 DEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPD-EKTKEELEELMSDIKKTANKVRSKLKSIE 74 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666677777777777766666666544332 34455555555555555455555444444
No 139
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=35.57 E-value=2.2e+02 Score=24.88 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHH
Q psy5718 424 QLQGEMTRLTQENESAKEEVK 444 (720)
Q Consensus 424 ~lq~el~~lq~e~~~~keevk 444 (720)
..+.++..||+|++.+++-|+
T Consensus 72 ~~~~~~e~Lq~E~erLr~~v~ 92 (100)
T 1go4_E 72 RLREDHSQLQAECERLRGLLR 92 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444556666666666555544
No 140
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=35.04 E-value=45 Score=25.85 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 462 QEVETKNKEFETLTEELTLKQTTLNTTSTELQ 493 (720)
Q Consensus 462 ~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~ 493 (720)
.+++.+++|++.|+.++..+..++..+.++|.
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556666666666666555555555555443
No 141
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=34.43 E-value=1.2e+02 Score=25.62 Aligned_cols=38 Identities=24% Similarity=0.289 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 375 ATMERVKLITTARRDYEQLQGEMTRLTQENESAKEEVK 412 (720)
Q Consensus 375 ~~~Er~k~~ee~~~l~~ql~~Ei~~~~q~~ekLkeq~e 412 (720)
-...|.+++.++..++++|.++|.....++..|++..+
T Consensus 25 lAE~Rr~AL~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~ 62 (83)
T 1wlq_A 25 VAEQRRKALYEALKENEKLHKEIEQKDSEIARLRKENK 62 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888877777776666665555555554443
No 142
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=34.42 E-value=3.3e+02 Score=31.34 Aligned_cols=52 Identities=10% Similarity=0.088 Sum_probs=27.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy5718 458 DQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEM 509 (720)
Q Consensus 458 d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~ 509 (720)
|....+++.+.++++.+...+.........--.-++.|+...++-++.+..+
T Consensus 600 ~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~ 651 (675)
T 3d2f_A 600 DSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKL 651 (675)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Confidence 4456778888888888888877766666666667777777777777766664
No 143
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=33.89 E-value=2.9e+02 Score=25.63 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy5718 369 LEKRLRATMERVKLITTARRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQ 448 (720)
Q Consensus 369 ~~~~~~~~~Er~k~~ee~~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~q 448 (720)
++.+.....++...++.-.+..+...++.++-+.++.+- +.-+..++++...+..........+.++++-+-+
T Consensus 43 lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RK-------l~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~ 115 (147)
T 2b9c_A 43 IESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARK-------LVIIESDLERAEERAELSEGKCAELEEELKTVTN 115 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy5718 449 ALEELAVNYDQKSQEVETKNKEFETLTEEL 478 (720)
Q Consensus 449 aleel~~n~d~~~~e~e~~~~e~~~l~~el 478 (720)
-|..|.+.-+..++.-+....++..|...|
T Consensus 116 nlKsLE~~eekas~rE~~yee~I~~L~~kL 145 (147)
T 2b9c_A 116 NLKSLEDKVEELLSKNYHLENEVARLKKLV 145 (147)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHHTTSCCCC
T ss_pred HHHhhHHhHHHHHHHHHHHHHHHHHHHHHh
No 144
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=33.02 E-value=2.1e+02 Score=27.88 Aligned_cols=18 Identities=22% Similarity=0.556 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHhHHhhhh
Q psy5718 505 RINEMLTNLLKDLCEIGLVI 524 (720)
Q Consensus 505 r~~e~~~~l~~dl~e~~~~~ 524 (720)
.-.++.-.|+.||+ |.+|
T Consensus 69 e~i~i~~DL~e~LT--Gl~V 86 (190)
T 4emc_A 69 ENSEVIKDLYEYLC--NVRV 86 (190)
T ss_dssp HHHHHHHHHHHHHH--SEEC
T ss_pred HhhhHHHHHHHHcc--CcEE
Confidence 34566677777884 5555
No 145
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=32.59 E-value=59 Score=30.26 Aligned_cols=65 Identities=14% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhcccccccchhHHHHHHhhhccchHhHHHH
Q psy5718 617 RERLYQQLDEKDEEINQQSQYAEKLKEQIMEQEEVSGLLVCGQTNERREQARKDLKGLEDTVTKE 681 (720)
Q Consensus 617 ~~~~~~q~~~lrdei~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~e 681 (720)
+..|..+.+.|--.++.-|-+||-|+...-...---.-..|.....--..|++||++|++++..|
T Consensus 16 k~kL~~~sd~LvtkVDDLQD~VE~LRkDV~~RgvrP~~~ql~~v~kdi~~a~~eL~~m~~~i~~e 80 (141)
T 3okq_A 16 QTELGDLSDTLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKLQEFIDTE 80 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
No 146
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=31.97 E-value=4e+02 Score=26.58 Aligned_cols=92 Identities=14% Similarity=0.259 Sum_probs=51.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHH-HH
Q psy5718 430 TRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFET--------------LTEELTLKQTTLNTTSTEL-QQ 494 (720)
Q Consensus 430 ~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~--------------l~~el~~~~~~~~~l~~el-~~ 494 (720)
..+.+....+..++.+....++.-..+|++..++++..+...+. +...+......+.....+. ..
T Consensus 112 K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~ 191 (301)
T 2efk_A 112 KMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSHMAEESKNEYAAQ 191 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666667777777777787777777665444333 2333333333333333332 34
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhHHh
Q psy5718 495 IKDMSNHQKKRINEMLTNLLKDLCEIG 521 (720)
Q Consensus 495 l~~~~~~~~kr~~e~~~~l~~dl~e~~ 521 (720)
+.....++.+...+-|..++..|-++.
T Consensus 192 v~~~n~~~~~~~~~~~p~~~~~lQ~le 218 (301)
T 2efk_A 192 LQRFNRDQAHFYFSQMPQIFDKLQDMD 218 (301)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666666666666666555443
No 147
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=31.73 E-value=75 Score=26.04 Aligned_cols=10 Identities=10% Similarity=0.139 Sum_probs=3.8
Q ss_pred HHHHHHHHHH
Q psy5718 442 EVKEVLQALE 451 (720)
Q Consensus 442 evke~~qale 451 (720)
++++++..+.
T Consensus 30 ~i~~LE~~v~ 39 (70)
T 1gd2_E 30 HLKALETQVV 39 (70)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344333333
No 148
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=31.71 E-value=2.2e+02 Score=23.48 Aligned_cols=55 Identities=18% Similarity=0.241 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q psy5718 418 ARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFE 472 (720)
Q Consensus 418 ~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~ 472 (720)
++..+..|..++..++.+.+.++.+-.-+...|..+..-.|-|..++-+.+..+.
T Consensus 12 ~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~La 66 (72)
T 3cve_A 12 VEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLA 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444445555566666666555555444444444444444555555544444443
No 149
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=31.21 E-value=35 Score=38.86 Aligned_cols=37 Identities=16% Similarity=0.365 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTELQQIKDMSN 500 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~ 500 (720)
+.+...++..|.++...+...-..++.++..-++...
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~a~~~~~ 450 (575)
T 2i1j_A 414 IRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQD 450 (575)
T ss_dssp ----------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555666666666655555543
No 150
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=31.15 E-value=2.9e+02 Score=24.80 Aligned_cols=17 Identities=35% Similarity=0.384 Sum_probs=7.8
Q ss_pred hHHHHHHHHHHHHHHHH
Q psy5718 461 SQEVETKNKEFETLTEE 477 (720)
Q Consensus 461 ~~e~e~~~~e~~~l~~e 477 (720)
+.+|+.++++++.+.-.
T Consensus 91 ~ae~erlr~~~~~~~~r 107 (121)
T 3mq7_A 91 SAEVERLRRENQVLSVR 107 (121)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhchhhhhH
Confidence 33444555555544433
No 151
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=30.72 E-value=2.4e+02 Score=25.96 Aligned_cols=7 Identities=71% Similarity=0.809 Sum_probs=2.6
Q ss_pred HHHHHHH
Q psy5718 469 KEFETLT 475 (720)
Q Consensus 469 ~e~~~l~ 475 (720)
.|+++|+
T Consensus 74 ~ElE~LT 80 (135)
T 2e7s_A 74 KEVEDLT 80 (135)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 152
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=30.55 E-value=3.5e+02 Score=25.47 Aligned_cols=15 Identities=47% Similarity=0.574 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHH
Q psy5718 464 VETKNKEFETLTEEL 478 (720)
Q Consensus 464 ~e~~~~e~~~l~~el 478 (720)
.....+|+++|+..|
T Consensus 81 ~~~ie~ElEeLTasL 95 (154)
T 2ocy_A 81 ADKLNKEVEDLTASL 95 (154)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555555444
No 153
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=30.47 E-value=1.8e+02 Score=30.12 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 464 VETKNKEFETLTEELTLKQTTLNTTSTELQQI 495 (720)
Q Consensus 464 ~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l 495 (720)
++.....++....++....+.+..++.+++..
T Consensus 117 ~~~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a 148 (369)
T 4dk0_A 117 LNTAKATLNNAKAEMDVVQENIKQAEIEVNTA 148 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444444444444444433
No 154
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=30.24 E-value=1.2e+02 Score=29.27 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 411 VKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 411 ~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
++|++..+.+...++|.++.+|.+++...|++-+.+.+.|+
T Consensus 126 ireli~~AertV~kLqkeiD~LEDeL~~eKek~k~i~~eLD 166 (175)
T 3mud_A 126 IRELICYCLDTTAKNEKSIDDLEEKVAHAKEENLNMHQMLD 166 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777778888888888888888888888888776655544
No 155
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=30.23 E-value=1.9e+02 Score=31.82 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q psy5718 422 YEQLQGEMTRLTQENESAKEEVKEVLQALEELAV 455 (720)
Q Consensus 422 ~e~lq~el~~lq~e~~~~keevke~~qaleel~~ 455 (720)
.+.+..++..|.++...+++++.++...|.++..
T Consensus 71 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (455)
T 2dq0_A 71 VDELLAKSREIVKRIGELENEVEELKKKIDYYLW 104 (455)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777777777777777777776654
No 156
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=30.20 E-value=37 Score=37.94 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy5718 611 QKLEEERERLYQQLDEKDEEINQQSQYAEKLKEQ 644 (720)
Q Consensus 611 ~~~~~~~~~~~~q~~~lrdei~~k~~~~~~l~~~ 644 (720)
-.+++-+..+..+.+.||-+.|..++.|-++|..
T Consensus 36 ~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~ 69 (485)
T 3qne_A 36 IAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKA 69 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4455567888888999999999999999777664
No 157
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=30.11 E-value=54 Score=37.35 Aligned_cols=68 Identities=24% Similarity=0.288 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 425 LQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTEL 492 (720)
Q Consensus 425 lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el 492 (720)
+..++.+|........++-..+.+.+.+.....-.-.++.+.+..|...+..++............+|
T Consensus 389 ~e~~~~~l~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~a~~~~~~~~~~l 456 (575)
T 2i1j_A 389 LQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAAL 456 (575)
T ss_dssp -----------------------------------------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444444444455555555555555554444444443333
No 158
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=30.06 E-value=2.4e+02 Score=23.49 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy5718 404 NESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEV 443 (720)
Q Consensus 404 ~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keev 443 (720)
...|..++.+.-.........+|..+..+..+...++.++
T Consensus 10 ~~sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~ 49 (84)
T 1gk4_A 10 NESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEM 49 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444433333333333444444444444444444433
No 159
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=29.77 E-value=1.7e+02 Score=24.60 Aligned_cols=19 Identities=5% Similarity=0.272 Sum_probs=4.7
Q ss_pred HHHHHHHHHhhHHHHHHHH
Q psy5718 429 MTRLTQENESAKEEVKEVL 447 (720)
Q Consensus 429 l~~lq~e~~~~keevke~~ 447 (720)
+..|+..+.+.+.-+.++.
T Consensus 5 ie~L~~q~~~Le~~l~e~E 23 (86)
T 1x8y_A 5 LSQLQCQLAAKEAKLRDLE 23 (86)
T ss_dssp -------CTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333433444433333333
No 160
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=29.53 E-value=2.8e+02 Score=24.05 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHH---------HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 423 EQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQE---------VETKNKEFETLTEELTLKQTTLNTT 488 (720)
Q Consensus 423 e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~e---------~e~~~~e~~~l~~el~~~~~~~~~l 488 (720)
.+|+..+.+|+.+.+..... ..+|+.|...|.+..+- +.+-...++.|+.++-..+..+..+
T Consensus 18 kkL~~Ki~el~~ei~ke~~~----regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~el~K~q~~L~e~ 88 (98)
T 2ke4_A 18 KRLQQQLEERSRELQKEVDQ----REALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLEVQKYEAWLAEA 88 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666655544 34577777777665544 3344444444444444444443333
No 161
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=29.51 E-value=5.5e+02 Score=27.49 Aligned_cols=24 Identities=17% Similarity=-0.137 Sum_probs=14.8
Q ss_pred EEecCcEEEEecChhhhHHHHHhh
Q psy5718 118 IVFPGATERFVGKPEEVFEVIEEG 141 (720)
Q Consensus 118 ~~V~gltev~V~S~eev~~lL~~G 141 (720)
+|-+.+-+-...+++|+..+...-
T Consensus 130 ~YNkdl~~~~P~Twdel~~~a~~l 153 (471)
T 3mq9_A 130 IYNKDLLPNPPKTWEEIPALDKEL 153 (471)
T ss_dssp EEETTTCSSCCSBGGGHHHHHHHH
T ss_pred EEEhHHhcCCCCCHHHHHHHHHHH
Confidence 444454444457888888876553
No 162
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=28.92 E-value=3.4e+02 Score=30.23 Aligned_cols=32 Identities=6% Similarity=-0.002 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy5718 423 EQLQGEMTRLTQENESAKEEVKEVLQALEELA 454 (720)
Q Consensus 423 e~lq~el~~lq~e~~~~keevke~~qaleel~ 454 (720)
+.+..++..|.++...++++++++...|.++.
T Consensus 119 ~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l 150 (501)
T 1wle_A 119 QSLRARGREIRKQLTLLYPKEAQLEEQFYLRA 150 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555443
No 163
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=28.39 E-value=36 Score=37.66 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy5718 611 QKLEEERERLYQQLDEKDEEINQQSQYAEKLKEQ 644 (720)
Q Consensus 611 ~~~~~~~~~~~~q~~~lrdei~~k~~~~~~l~~~ 644 (720)
-.+++-+..+..+.+.||-+.|.-++.|-++|..
T Consensus 34 ~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~ 67 (455)
T 2dq0_A 34 LKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKK 67 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4455567888888999999999999999776654
No 164
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=27.67 E-value=6.3e+02 Score=27.57 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy5718 387 RRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEE 452 (720)
Q Consensus 387 ~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qalee 452 (720)
.+.++.++.||+.....+..+.+.-+.++..-.-....++..+..|+..=+..++-.....+.|.+
T Consensus 132 ~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~ 197 (450)
T 3r6n_A 132 QEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKE 197 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777888777777777666677776655555666777777776666666666655555554
No 165
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=27.63 E-value=30 Score=37.87 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhcccccccchhHHHHHHhhhccchHhHHHHHHHhhhh
Q psy5718 611 QKLEEERERLYQQLDEKDEEINQQSQYAEKLKEQIMEQEEVSGLLVCGQTNERREQARKDLKGLEDTVTKELQTLHNL 688 (720)
Q Consensus 611 ~~~~~~~~~~~~q~~~lrdei~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~el~~l~~l 688 (720)
-.+++-+..+..+.+.||.+.|.-++.|-++|.. ..+...-+.+...+.++-....+.++.+|+.+...|..+.|+
T Consensus 33 ~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~ 108 (425)
T 2dq3_A 33 LELDKRRREIIKRLEALRSERNKLSKEIGKLKRE--GKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNL 108 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSS--CSCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4455567888888999999999999999776654 322222233333344444444445555555555555555554
No 166
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=27.42 E-value=2.7e+02 Score=23.26 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 419 RRDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 419 ~~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
..++++||.++......+-.+...+++...+++
T Consensus 4 M~~l~eLq~e~~~~E~QL~~A~QKLkdA~~~~e 36 (78)
T 2ic6_A 4 MSTLKEVQDNITLHEQRLVTTRQKLKDAERAVE 36 (78)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445667777777777777777777776666655
No 167
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=26.93 E-value=2.5e+02 Score=23.26 Aligned_cols=42 Identities=26% Similarity=0.404 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy5718 411 VKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEE 452 (720)
Q Consensus 411 ~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qalee 452 (720)
+++........++.+|.++++|-.|..++...+|--...||.
T Consensus 5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~ 46 (74)
T 3swf_A 5 LEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEK 46 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555556667888999999999999999888887777775
No 168
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=26.80 E-value=3.4e+02 Score=24.15 Aligned_cols=52 Identities=19% Similarity=0.304 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhH
Q psy5718 411 VKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQKSQ 462 (720)
Q Consensus 411 ~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~~~~ 462 (720)
++..+...+...+.++..+..|-..|+...-.-+.+--.|+++..+|++-..
T Consensus 40 Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiE 91 (111)
T 2v66_B 40 LEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIE 91 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4555555666666777777777777777777777777777777777765443
No 169
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=26.58 E-value=1.6e+02 Score=23.03 Aligned_cols=6 Identities=33% Similarity=0.457 Sum_probs=2.1
Q ss_pred HHHHHH
Q psy5718 489 STELQQ 494 (720)
Q Consensus 489 ~~el~~ 494 (720)
..|+..
T Consensus 49 ~~e~~~ 54 (61)
T 1t2k_D 49 RNEVAQ 54 (61)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 170
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=26.20 E-value=96 Score=24.17 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhH
Q psy5718 417 TARRDYEQLQGEMTRLTQENESAK 440 (720)
Q Consensus 417 ~~~~~~e~lq~el~~lq~e~~~~k 440 (720)
....+|+.+..++..|+++++.++
T Consensus 31 ~v~~~~~~l~~e~~~L~~~~~~l~ 54 (57)
T 2wuj_A 31 QVRKDYEIVLRKKTELEAKVNELD 54 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444433
No 171
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=26.15 E-value=4.1e+02 Score=24.85 Aligned_cols=69 Identities=12% Similarity=0.324 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy5718 383 ITTARRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEE 452 (720)
Q Consensus 383 ~ee~~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qalee 452 (720)
........+.+...|..+...+.+|...-...+.++. ....+..+|..+..+....-..++..+.+|+.
T Consensus 38 m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~~-~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~ 106 (180)
T 1s94_A 38 MEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILSAPQ-TDDQMKEELEELMTDIKRTANKVRGKLKTIEL 106 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666777777777777666655555433 33455566666666666666666665555554
No 172
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=25.94 E-value=3.3e+02 Score=23.66 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 420 RDYEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 420 ~~~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
.++++||.++......+-.+...+++...+++
T Consensus 5 ~~i~eLq~e~~~~E~QL~~A~QKLkdA~~~~e 36 (96)
T 2ic9_A 5 STLKEVQDNITLHEQRLVTTRQKLKDAERAVE 36 (96)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667777777777777777777776665554
No 173
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=25.88 E-value=6.6e+02 Score=27.23 Aligned_cols=38 Identities=13% Similarity=0.332 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy5718 473 TLTEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEML 510 (720)
Q Consensus 473 ~l~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~ 510 (720)
.+.+|...+.+.+....+.+..|+...+....+|.++.
T Consensus 88 kml~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~L~ 125 (411)
T 3ghg_C 88 KMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLK 125 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555666666666677776666666665533
No 174
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=25.73 E-value=5.4e+02 Score=26.13 Aligned_cols=21 Identities=14% Similarity=0.253 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy5718 412 KELITTARRDYEQLQGEMTRL 432 (720)
Q Consensus 412 eell~~~~~~~e~lq~el~~l 432 (720)
+++.+..+.+.+.++..|...
T Consensus 80 ~el~~~l~~~~eeLr~~L~p~ 100 (273)
T 3s84_A 80 QRMERVLRENADSLQASLRPH 100 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHH
Confidence 455555555555555555433
No 175
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=25.52 E-value=2.3e+02 Score=21.72 Aligned_cols=11 Identities=0% Similarity=-0.094 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q psy5718 442 EVKEVLQALEE 452 (720)
Q Consensus 442 evke~~qalee 452 (720)
.+.+....+++
T Consensus 20 ~~~~~~~~~~~ 30 (60)
T 3htk_A 20 KCSLKTDEFLK 30 (60)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 176
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=25.38 E-value=1.7e+02 Score=23.11 Aligned_cols=12 Identities=8% Similarity=0.033 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHH
Q psy5718 486 NTTSTELQQIKD 497 (720)
Q Consensus 486 ~~l~~el~~l~~ 497 (720)
..|..|+..|+.
T Consensus 47 ~~L~~e~~~Lk~ 58 (63)
T 2wt7_A 47 ANLLKEKEKLEF 58 (63)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444443
No 177
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=25.32 E-value=4.9e+02 Score=25.54 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy5718 475 TEELTLKQTTLNTTSTE 491 (720)
Q Consensus 475 ~~el~~~~~~~~~l~~e 491 (720)
..-|++|..++.+++..
T Consensus 181 ~~lLNeKK~KIR~lq~~ 197 (213)
T 1ik9_A 181 ILVLNEKKTKIRSLHNK 197 (213)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHH
Confidence 33455556666655533
No 178
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=25.09 E-value=1e+02 Score=19.99 Aligned_cols=22 Identities=36% Similarity=0.539 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHH
Q psy5718 425 LQGEMTRLTQENESAKEEVKEV 446 (720)
Q Consensus 425 lq~el~~lq~e~~~~keevke~ 446 (720)
+..++..|+-|..+.|+||+++
T Consensus 5 lkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 5 LKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHHHHHHHHHhcc
Confidence 3445666777777777777764
No 179
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=24.36 E-value=2e+02 Score=28.32 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 376 TMERVKLITTARRDYEQLQGEMTRLTQENESA 407 (720)
Q Consensus 376 ~~Er~k~~ee~~~l~~ql~~Ei~~~~q~~ekL 407 (720)
+++|.+++.++..+++.|..+|.....++..|
T Consensus 103 AE~RR~AL~eaLeEN~~Lh~~ie~l~eEi~~L 134 (209)
T 2wvr_A 103 AEKRRKALYEALKENEKLHKEIEQKDNEIARL 134 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777777666666555554444433333
No 180
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=24.23 E-value=1.5e+02 Score=32.12 Aligned_cols=27 Identities=19% Similarity=0.367 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 425 LQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 425 lq~el~~lq~e~~~~keevke~~qale 451 (720)
+..++..++++.++.+++++++...++
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~ 34 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMK 34 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444333333
No 181
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=23.96 E-value=6.1e+02 Score=26.11 Aligned_cols=37 Identities=11% Similarity=0.022 Sum_probs=23.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy5718 432 LTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKN 468 (720)
Q Consensus 432 lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~ 468 (720)
+....+.+..........++....+|++..++++...
T Consensus 141 ~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~ 177 (350)
T 3aco_A 141 AEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAI 177 (350)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444455666677777788888877766554
No 182
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=23.60 E-value=1.9e+02 Score=22.95 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 468 NKEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 468 ~~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
..+.+.|..++..+...+.+|..+++.|+.-
T Consensus 22 k~~~~~le~~~~~L~~~N~~L~~~i~~L~~E 52 (63)
T 1ci6_A 22 RAEQEALTGECKELEKKNEALKERADSLAKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555555555544
No 183
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=23.43 E-value=3.3e+02 Score=22.88 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHHH
Q psy5718 426 QGEMTRLTQENESAKEEVKEVL 447 (720)
Q Consensus 426 q~el~~lq~e~~~~keevke~~ 447 (720)
+.++++.+..|-+...+++|..
T Consensus 30 ~EELs~vr~~ni~~eskL~eae 51 (81)
T 1wt6_A 30 SREMEAIRTDNQNFASQLREAE 51 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444433
No 184
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=23.38 E-value=4.7e+02 Score=24.56 Aligned_cols=63 Identities=21% Similarity=0.334 Sum_probs=38.1
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 431 RLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQ 493 (720)
Q Consensus 431 ~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~ 493 (720)
+-.++-+..++.++.+...|.+-...|+.-...|..+.++++.|.++|..-......+..+|.
T Consensus 67 kasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd 129 (155)
T 2efr_A 67 KYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMK 129 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555566666666666666666666666666677777777766665555555555554
No 185
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=23.37 E-value=1.1e+02 Score=24.29 Aligned_cols=30 Identities=10% Similarity=0.224 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 469 KEFETLTEELTLKQTTLNTTSTELQQIKDM 498 (720)
Q Consensus 469 ~e~~~l~~el~~~~~~~~~l~~el~~l~~~ 498 (720)
..+..|..++..+...+..|..+++.|++.
T Consensus 30 ~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~ 59 (63)
T 2dgc_A 30 QRMKQLEDKVEELLSKNYHLENEVARLKKL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555666666666666654
No 186
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=23.27 E-value=3.3e+02 Score=22.76 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHH
Q psy5718 393 LQGEMTRLTQENESA 407 (720)
Q Consensus 393 l~~Ei~~~~q~~ekL 407 (720)
+.+.+++.+.+++.|
T Consensus 16 l~E~~~q~qaEl~sL 30 (78)
T 3iv1_A 16 MKEEMDRAQAELNAL 30 (78)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHH
Confidence 333344444444433
No 187
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=23.00 E-value=2e+02 Score=27.96 Aligned_cols=24 Identities=21% Similarity=0.201 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 387 RRDYEQLQGEMTRLTQENESAKEE 410 (720)
Q Consensus 387 ~~l~~ql~~Ei~~~~q~~ekLkeq 410 (720)
+.-+..|.+++.+.++++++|+.+
T Consensus 151 ld~~~~L~~~n~~LqkeNeRL~~E 174 (184)
T 3w03_C 151 LDTIAENQAKNEHLQKENERLLRD 174 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444333
No 188
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=23.00 E-value=3.3e+02 Score=22.67 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy5718 475 TEELTLKQTTLNTTSTELQQIKDMSNHQKKRINEMLTN 512 (720)
Q Consensus 475 ~~el~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~~ 512 (720)
...+.+++.....+..|+..++........||+|+..-
T Consensus 36 I~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeE 73 (77)
T 2w83_C 36 IAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEE 73 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555556666666666666666666665443
No 189
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=22.99 E-value=2.4e+02 Score=21.65 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=0.0
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 454 AVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTTSTELQQI 495 (720)
Q Consensus 454 ~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l~~el~~l 495 (720)
...+.+-..++..+.+.|+.|.+-|...-.++..|..+++.|
T Consensus 8 ~~r~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 8 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 190
>1i6z_A BAG-family molecular chaperone regulator-1; triple helix bundle; NMR {Mus musculus} SCOP: a.7.7.1
Probab=22.62 E-value=4.5e+02 Score=24.15 Aligned_cols=68 Identities=16% Similarity=0.219 Sum_probs=48.4
Q ss_pred HhHHHHHHHHHHHHHHHHHhHHhhhhcCCCcccccCCccccchhhhHHHHHHHhhhhhhHhhHhhhhcccc--cchhHHH
Q psy5718 499 SNHQKKRINEMLTNLLKDLCEIGLVIGSEGDMKVTSDGAGKLEEEFTVARLYISKMKWRNGETVKEDEQVN--LADPVDM 576 (720)
Q Consensus 499 ~~~~~kr~~e~~~~l~~dl~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 576 (720)
..+-.|||.-....+||=|-.+-++. . -+.|+.+|.+=-.|=.-+.....+|-.+. +++|+..
T Consensus 61 ~~kl~Krik~~~E~~Mk~LE~LDs~~--------i-------p~~~~~~R~kRK~lV~~iQ~~L~~~D~l~~~~~~~~~~ 125 (135)
T 1i6z_A 61 LCKLDRKVKATIEQFMKILEEIDTMV--------L-------PEQFKDSRLKRKNLVKKVQVFLAECDTVEQYICQETER 125 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCC--------C-------CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc--------C-------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566788888888999887775442 1 13688999987777777777778887766 7777776
Q ss_pred HhhhC
Q psy5718 577 AASIA 581 (720)
Q Consensus 577 ~~~~~ 581 (720)
..++-
T Consensus 126 ~q~~~ 130 (135)
T 1i6z_A 126 LQSTN 130 (135)
T ss_dssp HCCCC
T ss_pred Hhhhh
Confidence 65543
No 191
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=22.41 E-value=2.1e+02 Score=31.03 Aligned_cols=32 Identities=28% Similarity=0.294 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy5718 423 EQLQGEMTRLTQENESAKEEVKEVLQALEELA 454 (720)
Q Consensus 423 e~lq~el~~lq~e~~~~keevke~~qaleel~ 454 (720)
+.+..++..|.++...+++++.++...|.++.
T Consensus 67 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (421)
T 1ses_A 67 EALIARGKALGEEAKRLEEALREKEARLEALL 98 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666666666666666665544
No 192
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=22.17 E-value=2.7e+02 Score=23.99 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5718 393 LQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESA 439 (720)
Q Consensus 393 l~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~ 439 (720)
++..|++|-++...+.+.+-+|-....+--+.+..|+.+|..+++..
T Consensus 41 yE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe~r 87 (92)
T 3vp9_A 41 YDFKMNQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLEQR 87 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45567778888888888776676666666677778888888877653
No 193
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=22.16 E-value=3.5e+02 Score=22.66 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 376 TMERVKLITTARRDYEQLQGEMTRLTQENESA 407 (720)
Q Consensus 376 ~~Er~k~~ee~~~l~~ql~~Ei~~~~q~~ekL 407 (720)
...|.+++.++..+..+|..+|.+...++.+|
T Consensus 22 AE~RR~AL~eaL~EN~~Lh~~ie~~~eEi~~L 53 (79)
T 2zxx_A 22 AEQRRKALYEALKENEKLHKEIEQKDSEIARL 53 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777777666655554444433333
No 194
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=22.10 E-value=3.3e+02 Score=26.44 Aligned_cols=26 Identities=23% Similarity=0.162 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5718 412 KELITTARRDYEQLQGEMTRLTQENE 437 (720)
Q Consensus 412 eell~~~~~~~e~lq~el~~lq~e~~ 437 (720)
++.+..+..-..+|+.|+..|.+.++
T Consensus 12 q~ql~~ad~LV~~L~~En~~L~~ql~ 37 (190)
T 4emc_A 12 KQQIDSADLLVANLVNENFVLSEKLD 37 (190)
T ss_dssp --------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444455555555544333
No 195
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=22.01 E-value=1.3e+02 Score=21.39 Aligned_cols=13 Identities=38% Similarity=0.412 Sum_probs=4.7
Q ss_pred hhhHHHHHHHHHH
Q psy5718 459 QKSQEVETKNKEF 471 (720)
Q Consensus 459 ~~~~e~e~~~~e~ 471 (720)
+|..++..++.++
T Consensus 18 ~KdeeIa~Lk~eN 30 (37)
T 1t6f_A 18 QKDNEIARLKKEN 30 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 3333333333333
No 196
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=21.89 E-value=4.7e+02 Score=24.05 Aligned_cols=91 Identities=11% Similarity=0.088 Sum_probs=0.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHH
Q psy5718 430 TRLTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEFETLTEELTLKQTTLNTT-STELQQIKDMSNHQKKRINE 508 (720)
Q Consensus 430 ~~lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~~~l~~el~~~~~~~~~l-~~el~~l~~~~~~~~kr~~e 508 (720)
.++..+|+.++.+..++...+..+....+.-...+..+...++.|...+.........+ ..+....+.....- .+
T Consensus 25 ~~l~~eN~~Lk~e~e~l~~~~~~~~~~~~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l~ek~~~e~~~le~~L----~e 100 (155)
T 2oto_A 25 IRLRHENKDLKARLENAMEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKEL----EE 100 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Q ss_pred HHHHHHHHHhHHhhhh
Q psy5718 509 MLTNLLKDLCEIGLVI 524 (720)
Q Consensus 509 ~~~~l~~dl~e~~~~~ 524 (720)
-...+..+|.++...+
T Consensus 101 ~~e~~~~~l~~~~e~~ 116 (155)
T 2oto_A 101 KKEALELAIDQASRDY 116 (155)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
No 197
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=21.85 E-value=2.5e+02 Score=23.83 Aligned_cols=30 Identities=10% Similarity=0.345 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy5718 482 QTTLNTTSTELQQIKDMSNHQKKRINEMLT 511 (720)
Q Consensus 482 ~~~~~~l~~el~~l~~~~~~~~kr~~e~~~ 511 (720)
...+..-..+|..+++..+..+++|.++-.
T Consensus 50 ~~el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 50 ENEISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 345666677777778887878888888543
No 198
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=21.84 E-value=4e+02 Score=23.23 Aligned_cols=55 Identities=27% Similarity=0.387 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy5718 384 TTARRDYEQLQGEMTRLTQENESAKEEVKELITTARRDYEQLQGEMTRLTQENESAKEE 442 (720)
Q Consensus 384 ee~~~l~~ql~~Ei~~~~q~~ekLkeq~eell~~~~~~~e~lq~el~~lq~e~~~~kee 442 (720)
.++.++|=.|.+...+...+..+|..+-..- ......|+.++.+|..||..+.-+
T Consensus 33 qELIqEYl~LE~~~s~le~e~~rlr~~~~~~----~~~v~eLe~everL~~ENq~L~~e 87 (104)
T 3s9g_A 33 QELIKEYLELEKSLSRMEDENNRLRLESKRL----DARVRELELELDRLRAENLQLLTE 87 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----hhhHHHHHHHHHHHHHHHHHHHHH
No 199
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=21.57 E-value=2.1e+02 Score=23.54 Aligned_cols=7 Identities=29% Similarity=0.506 Sum_probs=2.5
Q ss_pred HHHHHHH
Q psy5718 471 FETLTEE 477 (720)
Q Consensus 471 ~~~l~~e 477 (720)
+..|..+
T Consensus 56 I~~Lqse 62 (72)
T 3nmd_A 56 IQMLQNE 62 (72)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 200
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=21.25 E-value=3.1e+02 Score=26.43 Aligned_cols=106 Identities=11% Similarity=0.147 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhhHhhHhhhh--cccc------cchhHHHHhh----hCCCCCCcchhhcccCccccccccccchHHhhh
Q psy5718 545 TVARLYISKMKWRNGETVKED--EQVN------LADPVDMAAS----IAPTPESAPASILPAIPGSGLMLGSLSNEERQK 612 (720)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (720)
++.+-|++.+++=++.++..- ..+. +++.++++.. -+.+|+--.+.+-++|. ..
T Consensus 31 ~~~~~y~~~l~~~a~~~~eqL~~s~l~~el~~l~~e~~~~l~~~~~~l~~qL~P~~~e~~~~l~--------------~~ 96 (191)
T 1nfn_A 31 GRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLS--------------KE 96 (191)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHTTC----------CHH--------------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH--------------HH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHH------------HHHHHHHHHHHhhhcccccccchhHHHHHHhhhccchHhHH
Q psy5718 613 LEEERERLYQQLDEKDEEINQQSQYA------------EKLKEQIMEQEEVSGLLVCGQTNERREQARKDLKGLEDTVT 679 (720)
Q Consensus 613 ~~~~~~~~~~q~~~lrdei~~k~~~~------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~ 679 (720)
.+.++..+.+.|+.||..+.-+...+ .+|.+= ..+-|++..+++..|-.+++
T Consensus 97 ~e~lr~~l~kdlEelr~kL~P~~eEL~~~l~~~~Eelr~~L~Py---------------~eelr~kl~~~~eeLr~~l~ 160 (191)
T 1nfn_A 97 LQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASH---------------LRKLRKRLLRDADDLQKRLA 160 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhh---------------HHHHHHHHHHHHHHHHHHhH
No 201
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=21.22 E-value=2e+02 Score=24.79 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=9.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHHH
Q psy5718 428 EMTRLTQENESAKEEVKEVLQA 449 (720)
Q Consensus 428 el~~lq~e~~~~keevke~~qa 449 (720)
++..|+..+.++...+.|+...
T Consensus 13 ~~~~Lq~~~~~LE~~l~e~E~~ 34 (95)
T 3mov_A 13 LYFQGQKESRACLERIQELEDL 34 (95)
T ss_dssp -----CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555554443
No 202
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=21.17 E-value=4e+02 Score=22.96 Aligned_cols=17 Identities=12% Similarity=0.219 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy5718 480 LKQTTLNTTSTELQQIK 496 (720)
Q Consensus 480 ~~~~~~~~l~~el~~l~ 496 (720)
...+++.+..++|..|+
T Consensus 82 ~~~~klr~Yk~dL~~lk 98 (102)
T 2qyw_A 82 PMMSKLRNYRKDLAKLH 98 (102)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34456666666666654
No 203
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=21.13 E-value=4.4e+02 Score=23.45 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy5718 422 YEQLQGEMTRLTQENESAKEEVKEVLQALE 451 (720)
Q Consensus 422 ~e~lq~el~~lq~e~~~~keevke~~qale 451 (720)
+++||.++......+-.+...+++...+++
T Consensus 24 ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e 53 (113)
T 4fi5_A 24 MEELQREINAHEGQLVIARQKVRDAEKQYE 53 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456666666666666666666666555544
No 204
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=21.01 E-value=4.5e+02 Score=27.31 Aligned_cols=205 Identities=10% Similarity=0.072 Sum_probs=0.0
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhh
Q psy5718 385 TARRDY-EQLQGEMTRLTQENESAKEEV----KELITTARRDYEQLQGEMTRLTQENESAKEEVKEVLQALEELAVNYDQ 459 (720)
Q Consensus 385 e~~~l~-~ql~~Ei~~~~q~~ekLkeq~----eell~~~~~~~e~lq~el~~lq~e~~~~keevke~~qaleel~~n~d~ 459 (720)
++.+++ ..+++-....+.+++.+..++ ++.......+.+.++.++. .++.++.+.|+-+...+.+
T Consensus 63 ~l~kel~~l~~~~~~el~~y~~~l~~qL~P~~~e~~~~l~~~~~~Lr~~L~----------~dlEelR~~L~Py~~el~~ 132 (307)
T 2l7b_A 63 QVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLG----------ADMEDVCGRLVQYRGEVQA 132 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCSSTHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHhHHHHHHHHH----------HHHHHHHHHHHHHHHHHHH
Q ss_pred hhHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHhhhhcCCCcccccCCcc
Q psy5718 460 KSQE-VETKNKEFETLTEEL-TLKQTTLNTTSTELQQIKDMSNHQKKRINEMLTNLLKDLCEIGLVIGSEGDMKVTSDGA 537 (720)
Q Consensus 460 ~~~e-~e~~~~e~~~l~~el-~~~~~~~~~l~~el~~l~~~~~~~~kr~~e~~~~l~~dl~e~~~~~~~~~~~~~~~~~~ 537 (720)
+-.. +++.+..+.-+.+|| ......+.+|...|.- ...+|=..+..++.|+=..+++- ..+.-
T Consensus 133 ~l~~~~eelr~kL~Py~~EL~~~~~~~~eeLr~~L~p----------y~eeLr~kl~~~veelr~~L~Py-----~e~~~ 197 (307)
T 2l7b_A 133 MLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAV----------YQAGAREGAERGLSAIRERLGPL-----VEQGR 197 (307)
T ss_dssp HSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HTSCCSSHHHHHHHHHHHHCSSS-----CTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHHhhhH-----HHHHH
Q ss_pred ccchhhhHHHHHHHhhhhhhHhhHhhhhcccccchhHHHHhhhCCCCCCcchhhcccCccccccccccchHHhhhHHHHH
Q psy5718 538 GKLEEEFTVARLYISKMKWRNGETVKEDEQVNLADPVDMAASIAPTPESAPASILPAIPGSGLMLGSLSNEERQKLEEER 617 (720)
Q Consensus 538 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (720)
..++ .|-.+-..-++.-+...+..-+. .|..+...+...-..|...+..+-.+|. ..+++++
T Consensus 198 ~~~~---~v~~~k~~~L~~ki~~~~e~Lr~-~L~p~~~~~~~~l~~l~~q~ee~~~ql~--------------~~aeel~ 259 (307)
T 2l7b_A 198 VRAA---TVGSLAGQPLQERAQAWGERLRA-RMEEMGSRTRDRLDEVKEQVAEVRAKLE--------------EQAQQIR 259 (307)
T ss_dssp THHH---HHHHHHCCCCSSCSCCHHHHHHH-HHHHHHHTCSCSSCCCCSSCSSHHHHHH--------------HHHHHHH
T ss_pred HHHh---hhhhhhhHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
Q ss_pred HHHHHHHHHHHHHHH
Q psy5718 618 ERLYQQLDEKDEEIN 632 (720)
Q Consensus 618 ~~~~~q~~~lrdei~ 632 (720)
..++...+.||..+.
T Consensus 260 ~kl~~~~eeLr~~l~ 274 (307)
T 2l7b_A 260 LQAEAAQARLKSRFE 274 (307)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHhHhHHHHHHHHhh
No 205
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=20.67 E-value=3.9e+02 Score=26.35 Aligned_cols=36 Identities=6% Similarity=0.158 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q psy5718 468 NKEFETLTEELTLKQTTLNTTSTELQQIKDMSNHQK 503 (720)
Q Consensus 468 ~~e~~~l~~el~~~~~~~~~l~~el~~l~~~~~~~~ 503 (720)
..+++.|..++......+.-+.+|+++++.-..-.+
T Consensus 65 ~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~ 100 (213)
T 4ani_A 65 KAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEM 100 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444445555555554443333
No 206
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=20.03 E-value=6.7e+02 Score=25.16 Aligned_cols=40 Identities=10% Similarity=-0.007 Sum_probs=24.2
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q psy5718 432 LTQENESAKEEVKEVLQALEELAVNYDQKSQEVETKNKEF 471 (720)
Q Consensus 432 lq~e~~~~keevke~~qaleel~~n~d~~~~e~e~~~~e~ 471 (720)
+....+.+..........++....+|++..++++......
T Consensus 141 ~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~c~e~e~a~~~~ 180 (312)
T 3abh_A 141 AEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISRE 180 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444555566667777777777777766655433
Done!