BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5720
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17210|KINH_DROME Kinesin heavy chain OS=Drosophila melanogaster GN=Khc PE=1 SV=2
Length = 975
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 106/122 (86%), Positives = 112/122 (91%), Gaps = 2/122 (1%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
ESE+DGGSLAQ+QKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLR TMERVKAL
Sbjct: 840 ESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRCTMERVKAL 899
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQPVVPPVIRP 126
ETALKEAKEGAM+DRKRYQYEVDRIKEAVRQK+L RRGP QIAKPIR+GQ + IR
Sbjct: 900 ETALKEAKEGAMRDRKRYQYEVDRIKEAVRQKHLGRRGPQAQIAKPIRSGQGAIA--IRG 957
Query: 127 GG 128
GG
Sbjct: 958 GG 959
>sp|P21613|KINH_DORPE Kinesin heavy chain OS=Doryteuthis pealeii PE=2 SV=1
Length = 967
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/127 (80%), Positives = 110/127 (86%), Gaps = 5/127 (3%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
E ED GG+ AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRATMERVK+L
Sbjct: 819 EDEDTGGNAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKSL 878
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-----PVVP 121
E+ALK+AKEGAM+DRKRYQ+EVDRIKEAVRQKNLARRG A QIAKPIR GQ P
Sbjct: 879 ESALKDAKEGAMRDRKRYQHEVDRIKEAVRQKNLARRGHAAQIAKPIRPGQHQSVSPAQA 938
Query: 122 PVIRPGG 128
IR GG
Sbjct: 939 AAIRGGG 945
>sp|P33176|KINH_HUMAN Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1
Length = 963
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 107/127 (84%), Gaps = 5/127 (3%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
+S+D GGS AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 818 DSDDTGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 877
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-----PVVP 121
E+ALKEAKE A +DRKRYQ EVDRIKEAVR KN+ARRG + QIAKPIR GQ P P
Sbjct: 878 ESALKEAKENASRDRKRYQQEVDRIKEAVRSKNMARRGHSAQIAKPIRPGQHPAASPTHP 937
Query: 122 PVIRPGG 128
IR GG
Sbjct: 938 SAIRGGG 944
>sp|Q61768|KINH_MOUSE Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=3
Length = 963
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/127 (77%), Positives = 107/127 (84%), Gaps = 5/127 (3%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
+S+D GGS AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 818 DSDDTGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 877
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-----PVVP 121
E+ALKEAKE A +DRKRYQ EVDRIKEAVR KN+ARRG + QIAKPIR GQ P P
Sbjct: 878 ESALKEAKENASRDRKRYQQEVDRIKEAVRSKNMARRGHSAQIAKPIRPGQHPAASPTHP 937
Query: 122 PVIRPGG 128
+R GG
Sbjct: 938 GTVRGGG 944
>sp|Q2PQA9|KINH_RAT Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1
Length = 963
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/127 (77%), Positives = 107/127 (84%), Gaps = 5/127 (3%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
+S+D GGS AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 818 DSDDTGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 877
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-----PVVP 121
E+ALKEAKE A +DRKRYQ EVDRIKEAVR KN+ARRG + QIAKPIR GQ P P
Sbjct: 878 ESALKEAKENASRDRKRYQQEVDRIKEAVRSKNMARRGHSAQIAKPIRPGQHPAASPTHP 937
Query: 122 PVIRPGG 128
+R GG
Sbjct: 938 GAVRGGG 944
>sp|P28738|KIF5C_MOUSE Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=3
Length = 956
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 105/127 (82%), Gaps = 3/127 (2%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
+S+D GGS AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 819 DSDDGGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 878
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQPVVPPVIRP 126
E+ALKEAKE AM+DRKRYQ EVDRIKEAVR KN+ARR + QIAKPIR G P P
Sbjct: 879 ESALKEAKENAMRDRKRYQQEVDRIKEAVRAKNMARRAHSAQIAKPIRPGH---YPASSP 935
Query: 127 GGVTSPR 133
V + R
Sbjct: 936 TAVHAVR 942
>sp|O60282|KIF5C_HUMAN Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1
Length = 957
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 105/127 (82%), Gaps = 3/127 (2%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
+++D GGS AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 820 DNDDGGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 879
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQPVVPPVIRP 126
E+ALKEAKE AM+DRKRYQ EVDRIKEAVR KN+ARR + QIAKPIR G P P
Sbjct: 880 ESALKEAKENAMRDRKRYQQEVDRIKEAVRAKNMARRAHSAQIAKPIRPGH---YPASSP 936
Query: 127 GGVTSPR 133
V + R
Sbjct: 937 TAVHAIR 943
>sp|Q5R9K7|KIF5A_PONAB Kinesin heavy chain isoform 5A OS=Pongo abelii GN=KIF5A PE=2 SV=1
Length = 1032
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 103/127 (81%), Gaps = 2/127 (1%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
E ED GG +Q+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 816 EPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 875
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-PVVPPVIR 125
E ALKEAKEGAMKD++RYQ EVDRIKEAVR K+ +RG + QIAKP+R G P P
Sbjct: 876 EGALKEAKEGAMKDKRRYQQEVDRIKEAVRYKSSGKRGHSAQIAKPVRPGHYPASSPT-N 934
Query: 126 PGGVTSP 132
P G SP
Sbjct: 935 PYGTRSP 941
>sp|Q12840|KIF5A_HUMAN Kinesin heavy chain isoform 5A OS=Homo sapiens GN=KIF5A PE=1 SV=2
Length = 1032
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 103/127 (81%), Gaps = 2/127 (1%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
E ED GG +Q+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 816 EPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 875
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-PVVPPVIR 125
E ALKEAKEGAMKD++RYQ EVDRIKEAVR K+ +RG + QIAKP+R G P P
Sbjct: 876 EGALKEAKEGAMKDKRRYQQEVDRIKEAVRYKSSGKRGHSAQIAKPVRPGHYPASSPT-N 934
Query: 126 PGGVTSP 132
P G SP
Sbjct: 935 PYGTRSP 941
>sp|P33175|KIF5A_MOUSE Kinesin heavy chain isoform 5A OS=Mus musculus GN=Kif5a PE=1 SV=3
Length = 1027
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 103/127 (81%), Gaps = 2/127 (1%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
E ED GG +Q+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 816 EPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 875
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-PVVPPVIR 125
E ALKEAKEGAMKD++RYQ EVDRIKEAVR K+ +RG + QIAKP+R G P P
Sbjct: 876 EGALKEAKEGAMKDKRRYQQEVDRIKEAVRYKSSGKRGHSAQIAKPVRPGHYPASSPT-N 934
Query: 126 PGGVTSP 132
P G SP
Sbjct: 935 PYGTRSP 941
>sp|Q6QLM7|KIF5A_RAT Kinesin heavy chain isoform 5A OS=Rattus norvegicus GN=Kif5a PE=1
SV=1
Length = 1027
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 103/127 (81%), Gaps = 2/127 (1%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
E ED GG +Q+QKISFLENNL+QLT+VHKQLVRDNADLRCELPKLEKRLRAT ERVKAL
Sbjct: 816 EPEDSGGIHSQKQKISFLENNLEQLTEVHKQLVRDNADLRCELPKLEKRLRATAERVKAL 875
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQ-PVVPPVIR 125
E ALKEAKEGAMKD++RYQ EVDRIKEAVR K+ +RG + QIAKP+R G P P
Sbjct: 876 EGALKEAKEGAMKDKRRYQQEVDRIKEAVRYKSSGKRGHSAQIAKPVRPGHYPASSPT-N 934
Query: 126 PGGVTSP 132
P G SP
Sbjct: 935 PYGTRSP 941
>sp|P35978|KINH_STRPU Kinesin heavy chain OS=Strongylocentrotus purpuratus PE=2 SV=1
Length = 1031
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 96/107 (89%), Gaps = 2/107 (1%)
Query: 16 AQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKE 75
AQ+QKISFLENNL+QLTKVHKQLVRDNADLRCELPKLE+RLRAT ERVKALE +LKE KE
Sbjct: 824 AQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLERRLRATSERVKALEMSLKETKE 883
Query: 76 GAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQPVVPP 122
GAM+DRKRYQ EVDRI+EAVRQ+N A+RG + QIAK IRAG P PP
Sbjct: 884 GAMRDRKRYQQEVDRIREAVRQRNFAKRGSSAQIAKAIRAGHP--PP 928
>sp|P34540|KINH_CAEEL Kinesin heavy chain OS=Caenorhabditis elegans GN=unc-116 PE=2 SV=2
Length = 815
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 7 ESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKAL 66
E ED AQ+Q+I FLENNLD+LTKVHKQLVRDNADLR ELPK+E RLR +R+K L
Sbjct: 687 EGEDSLSGPAQKQRIQFLENNLDKLTKVHKQLVRDNADLRVELPKMEARLRGREDRIKIL 746
Query: 67 ETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIRAGQPVVPP 122
ETAL+++K+ + +RK+YQ EV+RIKEAVRQ+N+ RR APQI KPIR GQ P
Sbjct: 747 ETALRDSKQRSQAERKKYQQEVERIKEAVRQRNM-RRMNAPQIVKPIRPGQVYTSP 801
>sp|O43093|KINH_SYNRA Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1
Length = 935
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 9/139 (6%)
Query: 16 AQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKE 75
AQ++K++FLE NL+QLT V KQLV NA L+ E+ E++L A ER+++LET L A++
Sbjct: 794 AQQKKMAFLERNLEQLTNVQKQLVEQNASLKKEVALAERKLIARNERIQSLETLLHNAQD 853
Query: 76 GAMKDRKRYQYEVDRIKEAVRQ------KNLARRGPAPQIAKPIRAGQPVVPPVIRPGGV 129
+ K+++ ++ ++E + Q +N +IAKP+R + G +
Sbjct: 854 KLLNQNKKFEQQLATVRERLEQARSQKSQNSLAALNFSRIAKPLRGNGAAIDNGSDDGSL 913
Query: 130 -TSPRWGDEERKRKVIMGG 147
TSP D+ KR M G
Sbjct: 914 PTSPT--DKRDKRSSWMPG 930
>sp|P48467|KINH_NEUCR Kinesin heavy chain OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=kin
PE=1 SV=2
Length = 928
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 16 AQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKE 75
AQ++K++FLE NL+QLT+V +QLV N+ L+ E+ E++L A ER+++LE+ L+E++E
Sbjct: 782 AQQKKMAFLERNLEQLTQVQRQLVEQNSALKKEVAIAERKLMARNERIQSLESLLQESQE 841
Query: 76 GAMKDRKRYQYEVDRIK---EAVR---------QKNLARRGPAPQIAKPIRAGQPVV 120
+ +++ ++ +K EA + L +IAKP+R G V
Sbjct: 842 KMAQANHKFEVQLAAVKDRLEAAKAGSTRGLGTDAGLGGFSIGSRIAKPLRGGGDAV 898
>sp|Q86Z98|KINH_GIBMO Kinesin heavy chain OS=Gibberella moniliformis GN=KLP1 PE=3 SV=1
Length = 931
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 24/128 (18%)
Query: 16 AQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKE 75
AQ++K++FLE NL+QLT+V +QLV N+ L+ E+ E++L A ER+++LE+ L++++E
Sbjct: 781 AQQKKMAFLERNLEQLTQVQRQLVEQNSALKKEVAIAERKLIARNERIQSLESLLQDSQE 840
Query: 76 GAMKDRKRYQYEVDRIKEAVRQKNLARRGPA---------------PQIAKPIRAG---- 116
+Y ++ +KE + LA+ G +IAKP+R G
Sbjct: 841 KMAAANHKY-VQLAAVKERLE---LAKAGSTRGLNSPGGFSFANAGSRIAKPLRGGGGGN 896
Query: 117 -QPVVPPV 123
P +P +
Sbjct: 897 DAPSIPTI 904
>sp|Q86ZC1|KINH_BOTFU Kinesin heavy chain OS=Botryotinia fuckeliana GN=klp1 PE=3 SV=1
Length = 880
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 16 AQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKE 75
AQ++K++FLE NL+QLT V +QLV N L+ E+ E++L A ER+++LE+ L++++E
Sbjct: 782 AQQKKMAFLERNLEQLTHVQRQLVEQNGSLKKEVAIAERKLIARNERIQSLESLLQDSQE 841
Query: 76 GAMKDRKRYQY 86
RY +
Sbjct: 842 KLTTASHRYGF 852
>sp|Q54UC9|KIF3_DICDI Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3 PE=1
SV=1
Length = 1193
Score = 36.2 bits (82), Expect = 0.083, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 19 QKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKEGAM 78
Q+ +F+++ LD++T V QLV +N + E+ +L+K L E + LE + +E
Sbjct: 866 QEAAFVQSKLDEITAVKHQLVIENNKHKTEVERLKKLLSHRGEHILILEKTMAINQESLF 925
Query: 79 K---DRKRYQYEVDRIKEAVRQKN--LARRGPAPQIAKPIRAGQPVVPPVIRPGG 128
K + E DR K + + N L++ G Q G V VIR GG
Sbjct: 926 KLALNHNALTIEHDRAKNELEKLNNLLSQVGVDAQ-----NTGGARVARVIRGGG 975
>sp|Q9UTR7|MCP3_SCHPO Meiotic coiled-coil protein 3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp3 PE=1 SV=1
Length = 952
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 4 SGNESEDDGGSLAQRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERV 63
+ N + + +++ +K+S +N+++++ N DL+ E KL+ +++A +ER
Sbjct: 293 ASNLKQAENKTISYEEKLSIAQNSINEIQT-------QNRDLKLETEKLQDQIKALLERN 345
Query: 64 KALETALKEAKEGAMKDRKRYQYEVDRIKEAVRQK 98
++L+ AL+ K R+ +KEA RQK
Sbjct: 346 QSLQEALETVKNDEKNLREMNANYETEMKEA-RQK 379
>sp|Q9NXR1|NDE1_HUMAN Nuclear distribution protein nudE homolog 1 OS=Homo sapiens GN=NDE1
PE=1 SV=2
Length = 346
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 20 KISFLENNL-------DQLTKVHKQLVRDNADLR-------CELPKLEKRLRATMERVKA 65
+IS LE++L DQL K ++L + N DL L E+RL +ER
Sbjct: 92 QISALEDDLAQTKAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAF 151
Query: 66 LETALKEAKEGAMKDRKRYQYEVDRIKE--AVRQKNLARRGPAPQIAKPIRAGQPV 119
LE+ L E KE ++ +R + E +++ AV+QK R P P + R V
Sbjct: 152 LESELDE-KENLLESVQRLKDEARDLRQELAVQQKQEKPRTPMPSSVEAERTDTAV 206
>sp|Q9ES39|NDE1_RAT Nuclear distribution protein nudE homolog 1 OS=Rattus norvegicus
GN=Nde1 PE=1 SV=1
Length = 344
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 20 KISFLENNL-------DQLTKVHKQLVRDNADLR-------CELPKLEKRLRATMERVKA 65
+IS LE++L DQL K ++L + N DL L E+RL +ER
Sbjct: 92 QISALEDDLAHTKAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAF 151
Query: 66 LETALKEAKEGAMKDRKRYQYEVDRIKE--AVRQKNLARRGPAPQIAKPIRAGQPV 119
LE+ L E KE ++ +R + E +++ AV+QK R P P + R V
Sbjct: 152 LESELDE-KENLLESVQRLKDEARDLRQELAVQQKQDKPRTPMPSSGETKRTDMAV 206
>sp|Q9CZA6|NDE1_MOUSE Nuclear distribution protein nudE homolog 1 OS=Mus musculus GN=Nde1
PE=1 SV=1
Length = 344
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 20 KISFLENNL-------DQLTKVHKQLVRDNADLR-------CELPKLEKRLRATMERVKA 65
+IS LE++L DQL K ++L + N DL L E+RL +ER
Sbjct: 92 QISALEDDLAQTKAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAF 151
Query: 66 LETALKEAKEGAMKDRKRYQYEVDRIKE--AVRQKNLARRGPAP 107
LE+ L E KE ++ +R + E +++ AV+QK R P P
Sbjct: 152 LESELDE-KENLLESVQRLKDEARDLRQELAVQQKQDKPRTPMP 194
>sp|P75471|HMW2_MYCPN Cytadherence high molecular weight protein 2 OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=hmw2 PE=1 SV=1
Length = 1818
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 49 LPKLEKRLRATMERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLARRGPAPQ 108
L K E++L A +++ AL + K D ++ Q + RI E + ++NLA+ PQ
Sbjct: 1702 LEKTEQKLSAFDQKINALAEQINTQK-AEHADSEKQQLLL-RI-EQLEKQNLAQAVQTPQ 1758
Query: 109 IAKPIRAGQPVVPPVIRPGGVTSP 132
+P+ VVP VI+P V S
Sbjct: 1759 PVQPVVQAPAVVPQVIQPQVVQSQ 1782
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 8 SEDDGGSLAQRQKISFLENNLDQLTKVHKQL 38
SEDDGG+L++++ +SFLE + + T + K
Sbjct: 136 SEDDGGALSEKEGLSFLETSALEATNIEKAF 166
>sp|Q8NWQ6|EBH_STAAW Extracellular matrix-binding protein ebh OS=Staphylococcus aureus
(strain MW2) GN=ebh PE=1 SV=1
Length = 9904
Score = 32.7 bits (73), Expect = 0.99, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 26 NNLDQLTKVHKQLVRD---NADLRCELPKLEKRLRATMERVKALETALKE--AKEGAMKD 80
N+LDQLT +Q + + NA R ++ ++ + +A E +KAL+ ++K+ E + K
Sbjct: 8015 NHLDQLTPAQQQALENQINNATTRDKVAEIIAQAQALNEAIKALKESIKDQPQTEASSKF 8074
Query: 81 RKRYQYEVDRIKEAVRQ-KNLARRGPAPQIAKPI 113
Q + D +AV+ K+L + P +AK I
Sbjct: 8075 INEDQAQKDAYTQAVQHAKDLINKTTDPTLAKSI 8108
>sp|Q6S002|KIF10_DICDI Kinesin-related protein 10 OS=Dictyostelium discoideum GN=kif10
PE=3 SV=1
Length = 1238
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 17 QRQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKALETALKEAKEG 76
QRQ+ LEN L L K + ++ +N ++ ++ K + + + ++K LE+++ E E
Sbjct: 535 QRQRKRELENELKSLEKQQQSILNENNNV--DIIKRTNEIGSQILKIKTLESSINEKLEM 592
Query: 77 AMKDRKRYQYEV 88
+ R++ Q E+
Sbjct: 593 NNQWRRKLQSEL 604
>sp|Q61043|NIN_MOUSE Ninein OS=Mus musculus GN=Nin PE=2 SV=3
Length = 2035
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 4 SGNESEDDGGSLAQRQKISFLENN---LDQLTKVHKQLVRDNADLRCELPKLEKRLR 57
+G E+E DG +Q LE N L L + H+ V++NA + E+ +L++RL+
Sbjct: 1035 AGEEAEGDGAMSLLQQGEQLLEENGDVLISLQRAHEHAVKENAKMATEISRLQQRLK 1091
>sp|Q3UWM4|KDM7_MOUSE Lysine-specific demethylase 7 OS=Mus musculus GN=Jhdm1d PE=2 SV=2
Length = 940
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 60 MERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLAR--RGPAPQIAKPIRA-G 116
++ VKAL TALK + + ++ D ++ K L++ R + KP+++ G
Sbjct: 429 VQGVKALHTALKLWMKKELVSEHAFEIP-DNVRPGHLIKELSKVIRAIEEENGKPVKSQG 487
Query: 117 QPVVPPVIRPGGVTSPRWGDEERKRKV 143
P V PV RP SP + + RK+
Sbjct: 488 IPSVCPVSRPSNEASPPYHSRRKMRKL 514
>sp|P84903|STIM1_RAT Stromal interaction molecule 1 OS=Rattus norvegicus GN=Stim1 PE=1
SV=1
Length = 685
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 52 LEKRLRATMERVKALETALKEAKEGAMKDRKRYQY---EVDRIKEAVRQ 97
LEK+LR + K LKE +EG +R R +Y E+++++EA+R+
Sbjct: 282 LEKKLRDEINLAKQEAQRLKELREGTENERSRQKYAEEELEQVREALRK 330
>sp|P70302|STIM1_MOUSE Stromal interaction molecule 1 OS=Mus musculus GN=Stim1 PE=1 SV=2
Length = 685
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 52 LEKRLRATMERVKALETALKEAKEGAMKDRKRYQY---EVDRIKEAVRQ 97
LEK+LR + K LKE +EG +R R +Y E+++++EA+R+
Sbjct: 282 LEKKLRDEINLAKQEAQRLKELREGTENERSRQKYAEEELEQVREALRK 330
>sp|Q13586|STIM1_HUMAN Stromal interaction molecule 1 OS=Homo sapiens GN=STIM1 PE=1 SV=3
Length = 685
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 52 LEKRLRATMERVKALETALKEAKEGAMKDRKRYQY---EVDRIKEAVRQ 97
LEK+LR + K LKE +EG +R R +Y E+++++EA+R+
Sbjct: 282 LEKKLRDEINLAKQEAQRLKELREGTENERSRQKYAEEELEQVREALRK 330
>sp|Q58CP9|STIM1_BOVIN Stromal interaction molecule 1 OS=Bos taurus GN=STIM1 PE=2 SV=1
Length = 683
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 52 LEKRLRATMERVKALETALKEAKEGAMKDRKRYQY---EVDRIKEAVRQ 97
LEK+LR + K LKE +EG +R R +Y E+++++EA+R+
Sbjct: 280 LEKKLRDEINLAKQEAQRLKELREGTENERSRQKYAEEELEQVREALRK 328
>sp|A7I5N9|RL3_METB6 50S ribosomal protein L3P OS=Methanoregula boonei (strain 6A8)
GN=rpl3p PE=3 SV=1
Length = 337
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 9/105 (8%)
Query: 43 ADLRCELPKLEKRLRATMERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNLAR 102
A L E+ L ATM V L E K K+Y+Y + + +R N+
Sbjct: 135 AGLVAEIYALAYTQPATMSGVPKKVPDLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIE 194
Query: 103 RGPAPQIAKPIRAGQPVVPPVIRPGGVTSPRWGDEERKRKVIMGG 147
G I I G+ PV RWG RKRK +GG
Sbjct: 195 TGAYADITA-ITIGKGTQGPV--------KRWGVTLRKRKHSVGG 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,655,564
Number of Sequences: 539616
Number of extensions: 2346872
Number of successful extensions: 10426
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 9957
Number of HSP's gapped (non-prelim): 788
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)