Query psy5720
Match_columns 153
No_of_seqs 84 out of 86
Neff 3.2
Searched_HMMs 13730
Date Sat Aug 17 00:54:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5720.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5720hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ivsa1 a.2.7.3 (A:797-862) Va 53.8 20 0.0014 21.6 6.5 50 47-96 4-63 (66)
2 d1grja1 a.2.1.1 (A:2-79) GreA 41.8 39 0.0028 21.6 6.1 55 20-74 9-72 (78)
3 d1nkpa_ a.38.1.1 (A:) Myc prot 39.2 16 0.0011 23.1 3.7 42 20-65 43-84 (88)
4 d1ez3a_ a.47.2.1 (A:) Syntaxin 37.4 48 0.0035 21.4 7.7 23 18-40 16-38 (124)
5 d1nlwa_ a.38.1.1 (A:) Mad prot 36.3 14 0.001 22.9 3.0 8 20-27 38-45 (79)
6 d3b8ma1 d.58.60.1 (A:64-330) E 35.1 69 0.0051 23.7 7.5 27 82-114 168-194 (267)
7 d1t98a2 a.47.6.1 (A:119-281) C 33.1 51 0.0037 24.3 6.2 48 42-96 76-123 (163)
8 d1nkpa_ a.38.1.1 (A:) Myc prot 33.1 39 0.0029 21.0 5.0 36 56-95 47-82 (88)
9 d1ykhb1 a.252.1.1 (B:2-130) RN 31.9 56 0.0041 22.4 6.0 53 44-96 74-126 (129)
10 d1io1a_ e.32.1.1 (A:) Phase 1 30.3 46 0.0034 23.1 5.3 30 69-98 32-70 (395)
11 d1fxka_ a.2.5.1 (A:) Prefoldin 28.9 68 0.0049 20.5 9.0 59 19-77 22-95 (107)
12 d2clya1 f.52.1.1 (A:79-183) AT 27.4 84 0.0061 21.1 6.4 45 40-100 51-95 (105)
13 d1nkpb_ a.38.1.1 (B:) Max prot 26.1 24 0.0018 21.9 2.8 31 20-54 38-68 (83)
14 d2efla1 a.238.1.4 (A:1-288) Fo 25.8 95 0.0069 21.2 8.6 9 81-89 187-195 (288)
15 d2j5ya1 a.8.1.2 (A:1-53) PAB { 25.1 23 0.0016 21.9 2.4 17 67-83 4-20 (53)
16 d1qvra2 c.37.1.20 (A:149-535) 25.1 1.5E+02 0.011 23.1 10.7 52 17-68 251-303 (387)
17 d1nkpb_ a.38.1.1 (B:) Max prot 24.8 38 0.0028 20.9 3.7 17 56-72 42-58 (83)
18 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 23.1 93 0.0068 20.2 9.8 55 18-72 15-74 (196)
19 d1ek9a_ f.5.1.1 (A:) Integral 22.1 1.3E+02 0.0094 21.4 8.4 40 45-84 323-362 (428)
20 d1v9va1 a.29.10.1 (A:8-108) Mi 20.6 41 0.003 23.1 3.3 43 31-76 31-76 (101)
No 1
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=53.79 E-value=20 Score=21.64 Aligned_cols=50 Identities=24% Similarity=0.229 Sum_probs=24.9
Q ss_pred cchHHHHHHHHHhHHHHHHHHHHHH----------HHHHHHHHhhhHHHHHHHHHHHHHH
Q psy5720 47 CELPKLEKRLRATMERVKALETALK----------EAKEGAMKDRKRYQYEVDRIKEAVR 96 (153)
Q Consensus 47 ~El~klEKrL~ar~ERIk~LE~aLk----------eakE~~~k~~~ryq~Ev~riKe~l~ 96 (153)
.|+.+++|.|..-.--|..|+.-|. +..+.--.....|+.+++.|.+.+.
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~kL~N~~F~~kAP~~Vv~~~k~kl~~~~~~~~~l~~~l~ 63 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREALS 63 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSTTHHHHSCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCChHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555444444444444442 1222222344566777777776664
No 2
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.76 E-value=39 Score=21.61 Aligned_cols=55 Identities=25% Similarity=0.386 Sum_probs=37.7
Q ss_pred HHHHHHhhHHHHHHHHHH-HH------hhhhhhhc--chHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy5720 20 KISFLENNLDQLTKVHKQ-LV------RDNADLRC--ELPKLEKRLRATMERVKALETALKEAK 74 (153)
Q Consensus 20 KiaFLE~NLEQLT~VhKQ-LV------~dNa~Lk~--El~klEKrL~ar~ERIk~LE~aLkeak 74 (153)
-..-|+..|+.|..|.+. ++ +...||+- |..-+..++..-.-||..||..|+.|+
T Consensus 9 g~~~L~~EL~~L~~~~rpei~~~I~~Ar~~GDlsENaeY~aAKe~q~~~e~RI~eLe~~L~~a~ 72 (78)
T d1grja1 9 GAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 72 (78)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHcCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhCce
Confidence 356788888888887762 22 44555553 335566777777888999999887653
No 3
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.17 E-value=16 Score=23.08 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=18.7
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHhHHHHHH
Q psy5720 20 KISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRATMERVKA 65 (153)
Q Consensus 20 KiaFLE~NLEQLT~VhKQLV~dNa~Lk~El~klEKrL~ar~ERIk~ 65 (153)
|.+.|+.-.+-+. +|..++..|..++..+.+++..-..++..
T Consensus 43 K~~iL~~A~~yI~----~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 43 KVVILKKATAYIL----SVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554444333 33334444544544444444443333333
No 4
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=37.37 E-value=48 Score=21.44 Aligned_cols=23 Identities=17% Similarity=0.408 Sum_probs=18.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHh
Q psy5720 18 RQKISFLENNLDQLTKVHKQLVR 40 (153)
Q Consensus 18 kQKiaFLE~NLEQLT~VhKQLV~ 40 (153)
++.|.-|+.++++|...|...+-
T Consensus 16 r~~I~~i~~~v~~i~~~~~~~l~ 38 (124)
T d1ez3a_ 16 RGFIDKIAENVEEVKRKHSAILA 38 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 56788888999999988876663
No 5
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.33 E-value=14 Score=22.88 Aligned_cols=8 Identities=25% Similarity=0.480 Sum_probs=3.3
Q ss_pred HHHHHHhh
Q psy5720 20 KISFLENN 27 (153)
Q Consensus 20 KiaFLE~N 27 (153)
|.+.|..-
T Consensus 38 K~~iL~~A 45 (79)
T d1nlwa_ 38 TLSLLTKA 45 (79)
T ss_dssp THHHHHHH
T ss_pred HHHHHHHH
Confidence 34444433
No 6
>d3b8ma1 d.58.60.1 (A:64-330) Enterochelin transport protein FepE {Escherichia coli [TaxId: 562]}
Probab=35.12 E-value=69 Score=23.69 Aligned_cols=27 Identities=22% Similarity=0.390 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCccccccC
Q psy5720 82 KRYQYEVDRIKEAVRQKNLARRGPAPQIAKPIR 114 (153)
Q Consensus 82 ~ryq~Ev~riKe~l~~~n~~rr~~~arIAKPiR 114 (153)
..++.+|.++++++.-++.. -|-+|+=
T Consensus 168 ~~~~~~i~~l~~Al~IA~~a------gI~~p~~ 194 (267)
T d3b8ma1 168 NQLDANIQRLNYSLDIANAA------GIKKPVY 194 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------TCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHc------CCCCccc
Confidence 36678899999999877543 4667763
No 7
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.13 E-value=51 Score=24.28 Aligned_cols=48 Identities=25% Similarity=0.291 Sum_probs=36.3
Q ss_pred hhhhhcchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy5720 42 NADLRCELPKLEKRLRATMERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAVR 96 (153)
Q Consensus 42 Na~Lk~El~klEKrL~ar~ERIk~LE~aLkeakE~~~k~~~ryq~Ev~riKe~l~ 96 (153)
|.|-+.-+..+|+.|..|.- +|+|-|+-+...-+++|..+-+|-|++.
T Consensus 76 ~qdW~~AI~~Ce~LL~eTs~-------tLRELqdtL~aagd~lqa~Ll~IQ~a~~ 123 (163)
T d1t98a2 76 NKDWRAAISSCELLLSETSG-------TLRELQDTLEAAGDKLQANLLRIQDATM 123 (163)
T ss_dssp HHCHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHhhHHHHHHHHHHHHHHc
Confidence 44455556778888888765 5666777777888999999999988763
No 8
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.13 E-value=39 Score=21.03 Aligned_cols=36 Identities=6% Similarity=0.175 Sum_probs=21.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy5720 56 LRATMERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAV 95 (153)
Q Consensus 56 L~ar~ERIk~LE~aLkeakE~~~k~~~ryq~Ev~riKe~l 95 (153)
|....+.|+.|+.-+.+..+ +...+..+.+.+..++
T Consensus 47 L~~A~~yI~~L~~~~~~l~~----~~~~l~~~~~~L~~~l 82 (88)
T d1nkpa_ 47 LKKATAYILSVQAEEQKLIS----EEDLLRKRREQLKHKL 82 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 66778889999886655543 2233444444444444
No 9
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.91 E-value=56 Score=22.39 Aligned_cols=53 Identities=13% Similarity=0.281 Sum_probs=36.6
Q ss_pred hhhcchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy5720 44 DLRCELPKLEKRLRATMERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAVR 96 (153)
Q Consensus 44 ~Lk~El~klEKrL~ar~ERIk~LE~aLkeakE~~~k~~~ryq~Ev~riKe~l~ 96 (153)
.|=.-||-.+.==..-..||+.||.-+.++.+.+..--++-+..+..|.+++.
T Consensus 74 ~LI~sLP~~~~see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~ll~~i~~~i~ 126 (129)
T d1ykhb1 74 KLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIE 126 (129)
T ss_dssp HHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444554433334566899999999999988877777777777777766654
No 10
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=30.26 E-value=46 Score=23.15 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=22.7
Q ss_pred HHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHH
Q psy5720 69 ALKEAKEGAMK---------DRKRYQYEVDRIKEAVRQK 98 (153)
Q Consensus 69 aLkeakE~~~k---------~~~ryq~Ev~riKe~l~~~ 98 (153)
.|...+|-+.. ||..+|.||+.+++.|..-
T Consensus 32 iL~r~reLavqaan~t~~~~dr~ai~~E~~~l~~ei~~i 70 (395)
T d1io1a_ 32 NLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRV 70 (395)
T ss_dssp HHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555544 9999999999999999654
No 11
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=28.85 E-value=68 Score=20.54 Aligned_cols=59 Identities=17% Similarity=0.213 Sum_probs=35.2
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhhhhhhc-----------ch----HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy5720 19 QKISFLENNLDQLTKVHKQLVRDNADLRC-----------EL----PKLEKRLRATMERVKALETALKEAKEGA 77 (153)
Q Consensus 19 QKiaFLE~NLEQLT~VhKQLV~dNa~Lk~-----------El----~klEKrL~ar~ERIk~LE~aLkeakE~~ 77 (153)
+.+.-|+.-+.+...|-+-|-.-..+-+| ++ +.+++++..-..+|+.|+.-++...+.+
T Consensus 22 ~q~~~le~q~~E~~~vl~eL~~l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l 95 (107)
T d1fxka_ 22 VQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKKL 95 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666777777666544444322 33 5566666666777777777665555443
No 12
>d2clya1 f.52.1.1 (A:79-183) ATP synthase subunit b, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=27.37 E-value=84 Score=21.11 Aligned_cols=45 Identities=24% Similarity=0.363 Sum_probs=32.9
Q ss_pred hhhhhhhcchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhh
Q psy5720 40 RDNADLRCELPKLEKRLRATMERVKALETALKEAKEGAMKDRKRYQYEVDRIKEAVRQKNL 100 (153)
Q Consensus 40 ~dNa~Lk~El~klEKrL~ar~ERIk~LE~aLkeakE~~~k~~~ryq~Ev~riKe~l~~~n~ 100 (153)
++|..|.-|+.-.|+......| ++.|=-|+.+++.+.-++.|..+
T Consensus 51 kEnvalqlEa~yrerl~~v~~e----------------vK~rLDy~V~~e~~~Rr~eQ~hm 95 (105)
T d2clya1 51 RNNIAMALEVTYRERLHRVYRE----------------VKNRLDYHISVQNMMRQKEQEHM 95 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778887777777777766666 55666788888888777777654
No 13
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.12 E-value=24 Score=21.88 Aligned_cols=31 Identities=13% Similarity=0.345 Sum_probs=14.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhhhhhhcchHHHHH
Q psy5720 20 KISFLENNLDQLTKVHKQLVRDNADLRCELPKLEK 54 (153)
Q Consensus 20 KiaFLE~NLEQLT~VhKQLV~dNa~Lk~El~klEK 54 (153)
|.+.|+.-.+-+ ++|-.++.+|..++..+.+
T Consensus 38 K~~iL~~A~~yI----~~L~~~~~~l~~~~~~l~~ 68 (83)
T d1nkpb_ 38 RAQILDKATEYI----QYMRRKNHTHQQDIDDLKR 68 (83)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 555555544433 3444444444444444333
No 14
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.80 E-value=95 Score=21.23 Aligned_cols=9 Identities=11% Similarity=0.301 Sum_probs=3.5
Q ss_pred hhHHHHHHH
Q psy5720 81 RKRYQYEVD 89 (153)
Q Consensus 81 ~~ryq~Ev~ 89 (153)
+..|...|+
T Consensus 187 ~~~Y~~~v~ 195 (288)
T d2efla1 187 KADYSSILQ 195 (288)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333443333
No 15
>d2j5ya1 a.8.1.2 (A:1-53) PAB {Peptostreptococcus magnus [TaxId: 1260]}
Probab=25.08 E-value=23 Score=21.93 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHhhhH
Q psy5720 67 ETALKEAKEGAMKDRKR 83 (153)
Q Consensus 67 E~aLkeakE~~~k~~~r 83 (153)
|++|++|+|.+.++-+.
T Consensus 4 ~~~Lk~AKe~AI~eLK~ 20 (53)
T d2j5ya1 4 QWLLKNAKEDAIAELKK 20 (53)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78999999998886443
No 16
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=25.06 E-value=1.5e+02 Score=23.14 Aligned_cols=52 Identities=21% Similarity=0.269 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhh-hhhhcchHHHHHHHHHhHHHHHHHHH
Q psy5720 17 QRQKISFLENNLDQLTKVHKQLVRDN-ADLRCELPKLEKRLRATMERVKALET 68 (153)
Q Consensus 17 QkQKiaFLE~NLEQLT~VhKQLV~dN-a~Lk~El~klEKrL~ar~ERIk~LE~ 68 (153)
....+..|++.+.+|..-...|..++ .+...-+..++..|..-.+....|+.
T Consensus 251 ~P~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~ 303 (387)
T d1qvra2 251 APEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRA 303 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 34567888888888888877777554 33333334444444444444444433
No 17
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.76 E-value=38 Score=20.85 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=10.7
Q ss_pred HHHhHHHHHHHHHHHHH
Q psy5720 56 LRATMERVKALETALKE 72 (153)
Q Consensus 56 L~ar~ERIk~LE~aLke 72 (153)
|....+-|+.|..-+..
T Consensus 42 L~~A~~yI~~L~~~~~~ 58 (83)
T d1nkpb_ 42 LDKATEYIQYMRRKNHT 58 (83)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55667778777655443
No 18
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.12 E-value=93 Score=20.19 Aligned_cols=55 Identities=15% Similarity=0.276 Sum_probs=38.7
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHh-----hhhhhhcchHHHHHHHHHhHHHHHHHHHHHHH
Q psy5720 18 RQKISFLENNLDQLTKVHKQLVR-----DNADLRCELPKLEKRLRATMERVKALETALKE 72 (153)
Q Consensus 18 kQKiaFLE~NLEQLT~VhKQLV~-----dNa~Lk~El~klEKrL~ar~ERIk~LE~aLke 72 (153)
+..|.=+..+++.|...|+.+.. +...++.++..+...+....-+|+.+-..++.
T Consensus 15 ~~~i~~i~~~i~~L~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~k~~~~~~~~ 74 (196)
T d1fioa_ 15 NRDLDKYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSAQR 74 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35567778889999998888763 23557777777777777777777666655543
No 19
>d1ek9a_ f.5.1.1 (A:) Integral outer membrane protein TolC, efflux pump component {Escherichia coli [TaxId: 562]}
Probab=22.11 E-value=1.3e+02 Score=21.44 Aligned_cols=40 Identities=13% Similarity=0.142 Sum_probs=18.5
Q ss_pred hhcchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHH
Q psy5720 45 LRCELPKLEKRLRATMERVKALETALKEAKEGAMKDRKRY 84 (153)
Q Consensus 45 Lk~El~klEKrL~ar~ERIk~LE~aLkeakE~~~k~~~ry 84 (153)
++.++..+-..+....++|...+..++.+++.+-..+.+|
T Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~~~~~y 362 (428)
T d1ek9a_ 323 VVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGY 362 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444555555554444444444434443
No 20
>d1v9va1 a.29.10.1 (A:8-108) Microtubule-associated serine/threonine-protein kinase 3, MAST3 (KIAA0561) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=41 Score=23.10 Aligned_cols=43 Identities=33% Similarity=0.386 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhhhhhhcchHHHHHHHHHh---HHHHHHHHHHHHHHHHH
Q psy5720 31 LTKVHKQLVRDNADLRCELPKLEKRLRAT---MERVKALETALKEAKEG 76 (153)
Q Consensus 31 LT~VhKQLV~dNa~Lk~El~klEKrL~ar---~ERIk~LE~aLkeakE~ 76 (153)
|..||+|+|+=--| =|.|....|.+. -|=-.+||.+|.||+++
T Consensus 31 l~FvhHQiiElARD---CL~KS~e~lITs~YF~Else~LekLl~ea~er 76 (101)
T d1v9va1 31 LGFIHHQIVELARD---CLAKSGENLVTSRYFLEMQEKLERLLQDAHER 76 (101)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH---HHHhhhhcChhHHHHHHHHHHHHHHHHHHHhc
Confidence 67899999863211 133444444333 24457899999999874
Done!