BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5722
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17210|KINH_DROME Kinesin heavy chain OS=Drosophila melanogaster GN=Khc PE=1 SV=2
Length = 975
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 7 ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
A+REI AEDSI+VVCRFRPLN SEEKAGSKF+VKFP+ EEN +S+
Sbjct: 3 AEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA 49
>sp|P21613|KINH_DORPE Kinesin heavy chain OS=Doryteuthis pealeii PE=2 SV=1
Length = 967
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
++A+E +I+V+CR RPLN +EE+AGSKFI+KFP+
Sbjct: 2 DVASECNIKVICRVRPLNEAEERAGSKFILKFPT 35
>sp|P34540|KINH_CAEEL Kinesin heavy chain OS=Caenorhabditis elegans GN=unc-116 PE=2
SV=2
Length = 815
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
AE ++V CR RPLN +EEK +F+ KFPS E+ +SLG
Sbjct: 8 AECGVQVFCRIRPLNKTEEKNADRFLPKFPS---EDSISLG 45
>sp|P33176|KINH_HUMAN Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1
Length = 963
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
AE +I+V+CRFRPLN SE G K+I KF
Sbjct: 5 AECNIKVMCRFRPLNESEVNRGDKYIAKF 33
>sp|Q2PQA9|KINH_RAT Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1
Length = 963
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTA------SESSSEHT- 65
AE +I+V+CRFRPLN SE G K++ KF GE+ + A S +S E
Sbjct: 5 AECNIKVMCRFRPLNESEVNRGDKYVAKFQ--GEDTVMIASKPYAFDRVFQSSTSQEQVY 62
Query: 66 -----KLIGDVITGQN 76
K++ DV+ G N
Sbjct: 63 NDCAKKIVKDVLEGYN 78
>sp|Q61768|KINH_MOUSE Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=3
Length = 963
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTA------SESSSEHT- 65
AE +I+V+CRFRPLN SE G K++ KF GE+ + A S +S E
Sbjct: 5 AECNIKVMCRFRPLNESEVNRGDKYVAKFQ--GEDTVMIASKPYAFDRVFQSSTSQEQVY 62
Query: 66 -----KLIGDVITGQN 76
K++ DV+ G N
Sbjct: 63 NDCAKKIVKDVLEGYN 78
>sp|P28738|KIF5C_MOUSE Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=3
Length = 956
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
AE SI+V+CRFRPLN +E G KFI KF GEE
Sbjct: 5 AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEE 37
>sp|O60282|KIF5C_HUMAN Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1
Length = 957
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
AE SI+V+CRFRPLN +E G KFI KF
Sbjct: 5 AECSIKVMCRFRPLNEAEILRGDKFIPKF 33
>sp|P56536|KIF5C_RAT Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus
GN=Kif5c PE=1 SV=2
Length = 239
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
AE SI+V+CRFRPLN +E G KFI KF GEE
Sbjct: 5 AECSIKVMCRFRPLNEAEILRGDKFIPKF--KGEE 37
>sp|Q5R9K7|KIF5A_PONAB Kinesin heavy chain isoform 5A OS=Pongo abelii GN=KIF5A PE=2 SV=1
Length = 1032
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
E SI+V+CRFRPLN +E G KFI F
Sbjct: 7 ECSIKVLCRFRPLNQAEILRGDKFIPIF 34
>sp|Q12840|KIF5A_HUMAN Kinesin heavy chain isoform 5A OS=Homo sapiens GN=KIF5A PE=1 SV=2
Length = 1032
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
E SI+V+CRFRPLN +E G KFI F
Sbjct: 7 ECSIKVLCRFRPLNQAEILRGDKFIPIF 34
>sp|Q6QLM7|KIF5A_RAT Kinesin heavy chain isoform 5A OS=Rattus norvegicus GN=Kif5a PE=1
SV=1
Length = 1027
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
E SI+V+CRFRPLN +E G KFI F
Sbjct: 7 ECSIKVLCRFRPLNQAEILRGDKFIPIF 34
>sp|P33175|KIF5A_MOUSE Kinesin heavy chain isoform 5A OS=Mus musculus GN=Kif5a PE=1 SV=3
Length = 1027
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
E SI+V+CRFRPLN +E G KFI F
Sbjct: 7 ECSIKVLCRFRPLNQAEILRGDKFIPIF 34
>sp|Q86ZC1|KINH_BOTFU Kinesin heavy chain OS=Botryotinia fuckeliana GN=klp1 PE=3 SV=1
Length = 880
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 15 DSIRVVCRFRPLNHSEEKAGSKFIVKF 41
+SI+VVCRFRP N E + G++ +VKF
Sbjct: 3 NSIKVVCRFRPQNRIENEQGAQPVVKF 29
>sp|Q86Z98|KINH_GIBMO Kinesin heavy chain OS=Gibberella moniliformis GN=KLP1 PE=3 SV=1
Length = 931
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
+++ +SI+VV RFRP N E ++G K IV F
Sbjct: 1 MSSANSIKVVARFRPQNKVELESGGKPIVSF 31
>sp|Q8T135|KIF5_DICDI Kinesin-related protein 5 OS=Dictyostelium discoideum GN=kif5
PE=1 SV=1
Length = 990
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 11 IAAEDSIRVVCRFRPLNHSEEKAG-SKFIVKFP 42
+A +IRV+CRFRPLN E+ ++ V FP
Sbjct: 1 MATSCNIRVMCRFRPLNEREKALKENQTCVTFP 33
>sp|Q54UC9|KIF3_DICDI Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3
PE=1 SV=1
Length = 1193
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 15/24 (62%)
Query: 16 SIRVVCRFRPLNHSEEKAGSKFIV 39
SIRVVCRFRP N E G IV
Sbjct: 3 SIRVVCRFRPQNKLELAQGGDSIV 26
>sp|P48467|KINH_NEUCR Kinesin heavy chain OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=kin
PE=1 SV=2
Length = 928
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 15 DSIRVVCRFRPLNHSEEKAGSKFIVKF 41
+SI+VV RFRP N E ++G + IV F
Sbjct: 6 NSIKVVARFRPQNRVEIESGGQPIVTF 32
>sp|P46872|KRP85_STRPU Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus
GN=KRP85 PE=1 SV=1
Length = 699
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 15 DSIRVVCRFRPLNHSEEKAGSKFIVKF 41
D++RVV R RPLN E G K +VK
Sbjct: 9 DNVRVVVRCRPLNSKETGQGFKSVVKM 35
>sp|D3YXS5|KLP6_MOUSE Kinesin-like protein KLP6 OS=Mus musculus GN=Klp6 PE=3 SV=1
Length = 1028
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG 44
+ DS+RV R RP + E+ +GS+ ++ SG
Sbjct: 6 VPRSDSVRVAVRVRPFSQREKNSGSQCVISMHSG 39
>sp|Q672I1|POLG_SVSAP Genome polyprotein OS=Sapporo virus (isolate
GI/Human/Germany/pJG-Sap01) PE=3 SV=1
Length = 2280
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 24 RPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITGQNDKEKR 81
RP H EE+A + IV+F GG+ G + IG + + H D + G K R
Sbjct: 1045 RPQQHYEEEAPTA-IVEFTQGGDHIGYGVHIGNGNVITVTHVASTSDEVNGSAFKITR 1101
>sp|Q69014|POLG_SVM93 Genome polyprotein (Fragment) OS=Sapporo virus (strain Human/United
Kingdom/Manchester/1993) GN=ORF1 PE=1 SV=1
Length = 2208
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 24 RPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITGQNDKEKR 81
RP H EE+ G IV+F GG+ G + IG + + H D + G K R
Sbjct: 973 RPQQHYEEE-GPTAIVEFTQGGDHIGYGVHIGNGNVITVTHVASTSDEVNGSAFKITR 1029
>sp|O43093|KINH_SYNRA Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1
Length = 935
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 15/77 (19%)
Query: 15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLS-------------LGIGTASESS 61
++I+VVCRFRP N E + G I+ G + L G+ TA +
Sbjct: 4 NNIKVVCRFRPQNSLEIREGGTPIIDIDPEGTQLELKGKEFKGNFNFDKVFGMNTAQKDV 63
Query: 62 SEHT--KLIGDVITGQN 76
+++ ++ DV G N
Sbjct: 64 FDYSIKTIVDDVTAGYN 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,658,553
Number of Sequences: 539616
Number of extensions: 1170874
Number of successful extensions: 2147
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2126
Number of HSP's gapped (non-prelim): 26
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)