BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5723
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60WU2|SYB1_CAEBR Synaptobrevin-1 OS=Caenorhabditis briggsae GN=snb-1 PE=3 SV=1
Length = 108
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 51/65 (78%)
Query: 76 GFAGNSSGRQQKSDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQG 135
G AG G Q +L ++Q QVDEVVGIM+VNVEKVLERDQKLS+LD+RA+ALQ+G
Sbjct: 5 GDAGAQGGSQGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEG 64
Query: 136 ASQFE 140
ASQFE
Sbjct: 65 ASQFE 69
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 12 GDDGIVGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
GD G GG + P+ + KRLQQTQAQVDEVV IMK NVEKVLERDQKLS+LDDRA L
Sbjct: 5 GDAGAQGGSQGPR--PSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADAL 61
>sp|O02495|SYB1_CAEEL Synaptobrevin-1 OS=Caenorhabditis elegans GN=snb-1 PE=1 SV=1
Length = 109
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVVGIM+VNVEKVLERDQKLS+LD+RA+ALQ+GASQFE
Sbjct: 23 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFE 70
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
KRLQQTQAQVDEVV IMK NVEKVLERDQKLS+LDDRA L
Sbjct: 22 KRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADAL 62
>sp|P63025|VAMP3_RAT Vesicle-associated membrane protein 3 OS=Rattus norvegicus GN=Vamp3
PE=2 SV=1
Length = 103
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 79 GNSSGRQQKSDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQ 138
G SG + +L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQ
Sbjct: 4 GVPSGSSAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQ 63
Query: 139 FE 140
FE
Sbjct: 64 FE 65
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+RLQQTQ QVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 17 RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 57
>sp|P63024|VAMP3_MOUSE Vesicle-associated membrane protein 3 OS=Mus musculus GN=Vamp3 PE=1
SV=1
Length = 103
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 79 GNSSGRQQKSDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQ 138
G SG + +L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQ
Sbjct: 4 GVPSGSSAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQ 63
Query: 139 FE 140
FE
Sbjct: 64 FE 65
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+RLQQTQ QVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 17 RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 57
>sp|Q15836|VAMP3_HUMAN Vesicle-associated membrane protein 3 OS=Homo sapiens GN=VAMP3 PE=1
SV=3
Length = 100
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 81 SSGRQQKSDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
S+G + +L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 2 STGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 61
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+RLQQTQ QVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 13 RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 53
>sp|Q2KJD2|VAMP3_BOVIN Vesicle-associated membrane protein 3 OS=Bos taurus GN=VAMP3 PE=3
SV=1
Length = 104
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 18 RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 65
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+RLQQTQ QVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 17 RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 57
>sp|Q4R8T0|VAMP3_MACFA Vesicle-associated membrane protein 3 OS=Macaca fascicularis
GN=VAMP3 PE=3 SV=1
Length = 100
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 14 RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 61
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+RLQQTQ QVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 13 RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 53
>sp|P63045|VAMP2_RAT Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2
PE=1 SV=2
Length = 116
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 78
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 26 LTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 70
>sp|P63044|VAMP2_MOUSE Vesicle-associated membrane protein 2 OS=Mus musculus GN=Vamp2 PE=1
SV=2
Length = 116
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 78
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 26 LTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 70
>sp|Q9N0Y0|VAMP2_MACMU Vesicle-associated membrane protein 2 OS=Macaca mulatta GN=VAMP2
PE=3 SV=3
Length = 116
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 78
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 26 LTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 70
>sp|P63027|VAMP2_HUMAN Vesicle-associated membrane protein 2 OS=Homo sapiens GN=VAMP2 PE=1
SV=3
Length = 116
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 78
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 26 LTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 70
>sp|P63026|VAMP2_BOVIN Vesicle-associated membrane protein 2 OS=Bos taurus GN=VAMP2 PE=1
SV=2
Length = 116
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 78
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQVDEVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 26 LTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADAL 70
>sp|Q0V7N0|VAMP1_BOVIN Vesicle-associated membrane protein 1 OS=Bos taurus GN=VAMP1 PE=3
SV=2
Length = 118
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 80
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQV+EVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 28 MTSNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADAL 72
>sp|Q62442|VAMP1_MOUSE Vesicle-associated membrane protein 1 OS=Mus musculus GN=Vamp1 PE=1
SV=1
Length = 118
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV IMRVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFE 80
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQV+EVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 28 MTSNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADAL 72
>sp|P47193|VAMP2_XENLA Vesicle-associated membrane protein 2 OS=Xenopus laevis GN=vamp2
PE=3 SV=3
Length = 114
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNV+KVLERD KLSELD+RA+ALQ GASQFE
Sbjct: 29 RLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFE 76
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 40/48 (83%)
Query: 23 PQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
P + + +RLQQTQAQVDEVVDIM+ NV+KVLERD KLSELDDRA L
Sbjct: 21 PPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADAL 68
>sp|P18489|SYB_DROME Synaptobrevin OS=Drosophila melanogaster GN=Syb PE=2 SV=3
Length = 152
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
KL ++Q +VDEVVGIMRVNVEKVLERDQKLSEL RA+ L+QGASQFE
Sbjct: 47 KLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFE 94
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Query: 27 AAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNSSGRQQ 86
AAQK+LQQTQA+VDEVV IM+ NVEKVLERDQKLSEL +RA L + G S QQ
Sbjct: 43 AAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQ------GASQFEQQ 96
Query: 87 KSDPKSKLSESQKQVDEVVGIMRV 110
K K + ++ ++G++ V
Sbjct: 97 AGKLKRKQWWANMKMMIILGVIAV 120
>sp|P13701|SYB_TORCA Synaptobrevin OS=Torpedo californica PE=2 SV=1
Length = 120
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV I+RVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 35 RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFE 82
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 17 VGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
G P P + +RLQQTQAQV+EVVDI++ NV+KVLERDQKLSELDDRA L
Sbjct: 21 TGPPGAPPNTTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADAL 74
>sp|P23763|VAMP1_HUMAN Vesicle-associated membrane protein 1 OS=Homo sapiens GN=VAMP1 PE=1
SV=1
Length = 118
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 44/48 (91%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV I+RVNV+KVLERDQKLSELD+RA+ALQ GASQFE
Sbjct: 33 RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFE 80
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 40/45 (88%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+ + +RLQQTQAQV+EVVDI++ NV+KVLERDQKLSELDDRA L
Sbjct: 28 MTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADAL 72
>sp|P35589|SYB_APLCA Synaptobrevin OS=Aplysia californica PE=2 SV=1
Length = 180
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QVDEVV IMRVNVEKVL+RDQK+S+LD+RA ALQ GASQFE
Sbjct: 21 RLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFE 68
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
KRLQQTQAQVDEVVDIM+ NVEKVL+RDQK+S+LDDRA L
Sbjct: 20 KRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEAL 60
>sp|Q63666|VAMP1_RAT Vesicle-associated membrane protein 1 OS=Rattus norvegicus GN=Vamp1
PE=1 SV=2
Length = 118
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV IMRVNV+KVLERDQKLSELD+RA+ALQ GAS FE
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASVFE 80
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+RLQQTQAQV+EVVDIM+ NV+KVLERDQKLSELDDRA L
Sbjct: 32 RRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADAL 72
>sp|P47194|SYB_DORPE Synaptobrevin OS=Doryteuthis pealeii PE=1 SV=1
Length = 125
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV IMRVNV+KVLERD K+SELD+RA+ALQ GASQFE
Sbjct: 40 RLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFE 87
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 30 KRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
KRLQQTQAQV+EVVDIM+ NV+KVLERD K+SELDDRA L
Sbjct: 39 KRLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADAL 79
>sp|Q27236|SYBL_SCHMA Synaptobrevin-like protein OS=Schistosoma mansoni PE=2 SV=1
Length = 131
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+L ++Q QV+EVV IMRVNV+KVLERD+ LSELD RA+ALQ GASQFE
Sbjct: 18 RLQQTQAQVNEVVDIMRVNVDKVLERDKNLSELDGRADALQAGASQFE 65
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 26 IAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
I KRLQQTQAQV+EVVDIM+ NV+KVLERD+ LSELD RA L
Sbjct: 13 IKTNKRLQQTQAQVNEVVDIMRVNVDKVLERDKNLSELDGRADAL 57
>sp|Q2KHY2|VAMP5_BOVIN Vesicle-associated membrane protein 5 OS=Bos taurus GN=VAMP5 PE=3
SV=1
Length = 116
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNSSGRQQK 87
A K L++ Q Q DEV +IM N +KVLERD KL+EL+ R+ L M F+ + QK
Sbjct: 2 AGKELERCQRQADEVTEIMLNNFDKVLERDGKLAELEQRSDQLLDMSSAFSKTTKTLAQK 61
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
+L Q+Q DEV IM N +KVLERD KL+EL+ R++ L +S F
Sbjct: 5 ELERCQRQADEVTEIMLNNFDKVLERDGKLAELEQRSDQLLDMSSAF 51
>sp|P31109|SNC1_YEAST Synaptobrevin homolog 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC1 PE=1 SV=1
Length = 117
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 23 PQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
PQ + ++ R + QA++D+ V IM+ N+ KV ER ++L+ ++D+A NL GF
Sbjct: 20 PQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGF 74
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 84 RQQKSDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
R Q KS+ +E Q ++D+ VGIMR N+ KV ER ++L+ ++++A+ L A F+
Sbjct: 19 RPQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFK 75
>sp|Q32L97|VAMP4_BOVIN Vesicle-associated membrane protein 4 OS=Bos taurus GN=VAMP4 PE=2
SV=1
Length = 141
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 16 IVGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDG 75
+ GP P+ +++ Q QVDEV+D+M+ N+ KV+ER ++L EL D++ +L
Sbjct: 37 FLRGPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNAT 96
Query: 76 GFAGNS 81
F+ S
Sbjct: 97 AFSNRS 102
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
K+ Q QVDEV+ +M+ N+ KV+ER ++L EL +++ +L A+ F
Sbjct: 52 KIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAF 98
>sp|O70480|VAMP4_MOUSE Vesicle-associated membrane protein 4 OS=Mus musculus GN=Vamp4 PE=1
SV=1
Length = 141
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 16 IVGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDG 75
+ GP P+ +++ Q QVDEV+D+M+ N+ KV+ER ++L EL D++ +L
Sbjct: 37 FLRGPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNAT 96
Query: 76 GFAGNS 81
F+ S
Sbjct: 97 AFSNRS 102
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
K+ Q QVDEV+ +M+ N+ KV+ER ++L EL +++ +L A+ F
Sbjct: 52 KIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAF 98
>sp|O75379|VAMP4_HUMAN Vesicle-associated membrane protein 4 OS=Homo sapiens GN=VAMP4 PE=1
SV=2
Length = 141
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 16 IVGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDG 75
+ GP P+ +++ Q QVDEV+D+M+ N+ KV+ER ++L EL D++ +L
Sbjct: 37 FLRGPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNAT 96
Query: 76 GFAGNS 81
F+ S
Sbjct: 97 AFSNRS 102
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
K+ Q QVDEV+ +M+ N+ KV+ER ++L EL +++ +L A+ F
Sbjct: 52 KIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAF 98
>sp|Q9Z2P8|VAMP5_MOUSE Vesicle-associated membrane protein 5 OS=Mus musculus GN=Vamp5
PE=2 SV=1
Length = 102
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNS 81
A K L+Q Q Q DEV +IM N +KVLER KL+EL+ R+ L M F+ +
Sbjct: 2 AGKELKQCQQQADEVTEIMLNNFDKVLERHGKLAELEQRSDQLLDMSSAFSKTT 55
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
+L + Q+Q DEV IM N +KVLER KL+EL+ R++ L +S F
Sbjct: 5 ELKQCQQQADEVTEIMLNNFDKVLERHGKLAELEQRSDQLLDMSSAF 51
>sp|Q6TMJ9|SYBA_DICDI Synaptobrevin-A OS=Dictyostelium discoideum GN=sybA PE=2 SV=1
Length = 95
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 88 SDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
S+P +K+ ++Q+QVD+V M + V K+L+ QK+SEL +++ ++QGA QF+
Sbjct: 2 SEPVNKVKQTQQQVDDVTNTMHIAVGKMLDNQQKVSELTDKSENMKQGAQQFK 54
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 31 RLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+++QTQ QVD+V + M V K+L+ QK+SEL D++ N+
Sbjct: 7 KVKQTQQQVDDVTNTMHIAVGKMLDNQQKVSELTDKSENM 46
>sp|Q9Z2J5|VAMP5_RAT Vesicle-associated membrane protein 5 OS=Rattus norvegicus
GN=Vamp5 PE=2 SV=1
Length = 102
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNS 81
A K L++ Q Q D+V +IM N +KVLERD KLSEL R+ L M F+ +
Sbjct: 2 AGKELERCQRQADQVTEIMLNNFDKVLERDGKLSELQQRSDQLLDMSSAFSKTT 55
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
+L Q+Q D+V IM N +KVLERD KLSEL R++ L +S F
Sbjct: 5 ELERCQRQADQVTEIMLNNFDKVLERDGKLSELQQRSDQLLDMSSAF 51
>sp|O95183|VAMP5_HUMAN Vesicle-associated membrane protein 5 OS=Homo sapiens GN=VAMP5
PE=1 SV=1
Length = 116
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 32 LQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNSSGRQQK 87
L++ Q Q +EV +IM+ N KVLER KL+EL R+ L M F + QK
Sbjct: 6 LERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQK 61
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
+L Q+Q +EV IMR N KVLER KL+EL R++ L +S F
Sbjct: 5 ELERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTF 51
>sp|Q92356|SYB1_SCHPO Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=syb1 PE=3 SV=1
Length = 121
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 78 AGNSSGRQQKSDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGAS 137
+GN++ S P K + Q+Q+D+ VGIMR N+ KV ER ++L L ++ + L A
Sbjct: 19 SGNAAA---SSTPNMKTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQ 75
Query: 138 QF 139
F
Sbjct: 76 GF 77
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 7 QPGGAGDDGIVGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDR 66
+P A G TP A Q Q+D+ V IM+ N+ KV ER ++L L D+
Sbjct: 12 EPSAAVRSGNAAASSTPNMKTAA-----IQQQIDDTVGIMRENISKVSERGERLDSLQDK 66
Query: 67 AGNLGKMDGGF 77
NL GF
Sbjct: 67 TDNLAVSAQGF 77
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 92 SKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
SKLS+ + Q+ EV GIM N+EKVL+R +K+ L ++ LQ A F+
Sbjct: 148 SKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQ 196
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 31 RLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+L + +AQ+ EV IM N+EKVL+R +K+ L D+ NL
Sbjct: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENL 188
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 23 PQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
P++I+ +L + +AQV EV +M N+EKVL+R +K+ L D+ NL
Sbjct: 125 PEEIS---KLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 92 SKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
SKLS+ + QV EV G+M N+EKVL+R +K+ L ++ L+ A F
Sbjct: 129 SKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDF 176
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 89 DPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPT 144
D SKL++ + QV EV G+M N+EKVL+R +K+ L ++ L+ A F T
Sbjct: 126 DEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGT 181
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 23 PQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
P +I+ +L + +AQV EV +M N+EKVL+R +K+ L D+ NL
Sbjct: 125 PDEIS---KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 89 DPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
D SKL++ + QV EV G+M N+EKVL+R +K+ L ++ L+ A F
Sbjct: 126 DEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDF 176
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 23 PQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
P +I+ +L + +AQV EV +M N+EKVL+R +K+ L D+ NL
Sbjct: 125 PDEIS---KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
>sp|P33328|SNC2_YEAST Synaptobrevin homolog 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC2 PE=1 SV=2
Length = 115
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
+Q + + ++D+ V IM+ N+ KV ER ++L+ ++D+A NL GF
Sbjct: 24 SQNKTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGF 73
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 35/50 (70%)
Query: 91 KSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
++K + ++++D+ VGIMR N+ KV ER ++L+ ++++A+ L A F+
Sbjct: 25 QNKTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFK 74
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 89 DPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
D SKL++ + QV EV G+M N+EKVL+R +K+ L ++ L+ A F
Sbjct: 191 DEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDF 241
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 23 PQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
P +I+ +L + +AQV EV +M N+EKVL+R +K+ L D+ NL
Sbjct: 190 PDEIS---KLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENL 234
>sp|P34351|SNB5_CAEEL Synaptobrevin-like protein 5 OS=Caenorhabditis elegans GN=snb-5
PE=4 SV=1
Length = 102
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSR 152
K+ +++++D V IM+ NV+K++ER KL +L RA L++ + + MS
Sbjct: 17 KIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREMSW 76
Query: 153 QINHL 157
+ N L
Sbjct: 77 KANSL 81
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 37/121 (30%)
Query: 31 RLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNSSGRQQKSDP 90
++ +T+ ++D V IMK NV+K++ER KL +L +RA L ++ SD
Sbjct: 17 KIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRL--------------EEASDV 62
Query: 91 KSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSM 150
K + V I R E+ +AN+L+ G V F GL+
Sbjct: 63 YVKCA---------VKIKR--------------EMSWKANSLRYGIIAVSSVSAFAGLAY 99
Query: 151 S 151
S
Sbjct: 100 S 100
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGFAGNSSGRQQK 87
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + + ++ +
Sbjct: 131 ARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTR 190
Query: 88 S 88
S
Sbjct: 191 S 191
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 88 SDPKSKLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
S + LS ++ +V IM N+E+VL+R + LS LD++A+ L + ++
Sbjct: 129 SRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY 180
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L +++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 131 ARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY 180
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQF 139
++ +V IM N+E+VL+R + LS LD++A+ L + ++
Sbjct: 141 ELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY 180
>sp|A4KZ49|POLG_TRIMV Genome polyprotein OS=Triticum mosaic virus PE=1 SV=3
Length = 3112
Score = 36.2 bits (82), Expect = 0.095, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 21 RTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
+TP A RL + Q+D+ + I++T ++ ER K SEL A NL
Sbjct: 1739 KTPDVKKAVMRLSTSATQIDQTIGILRTRLQLTRERLSKFSELKATAHNL 1788
Score = 34.7 bits (78), Expect = 0.29, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQ 133
+LS S Q+D+ +GI+R ++ ER K SEL A+ L+
Sbjct: 1749 RLSTSATQIDQTIGILRTRLQLTRERLSKFSELKATAHNLR 1789
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 31 RLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNL 70
R+ +TQAQVDE+ IM N++ V +R ++L L D+ NL
Sbjct: 125 RVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENL 164
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 93 KLSESQKQVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFE 140
+++E+Q QVDE+ GIM N++ V +R ++L L ++ L + F+
Sbjct: 125 RVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFK 172
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 27 AAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 130 CARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSRQINHLSA 159
++ +V IM N+E+VL+R + LS LD++AN L + ++ + L+M L+A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKY--LNMHSTYAKLAA 198
Query: 160 V 160
V
Sbjct: 199 V 199
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 131 ARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSRQINHLSA 159
++ +V IM N+E+VL+R + LS LD++AN L + ++ + L+M L+A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKY--LNMRSTYAKLAA 198
Query: 160 V 160
V
Sbjct: 199 V 199
>sp|A8MGI3|SYA_ALKOO Alanine--tRNA ligase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=alaS PE=3 SV=1
Length = 880
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 15 GIVGGPRTPQQIA---AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKL-SELDDRAGNL 70
G+ G R + I A K +Q+ Q + E+ D +KT V+ V+ER L E ++ +
Sbjct: 689 GVAAGVRRIEAITGMEAYKYVQKNQKTIQEIADTLKTQVQNVVERVADLVHETKEKDREI 748
Query: 71 GKMDGGFAGNSSG 83
K+ A NS+G
Sbjct: 749 NKLKSQLASNSTG 761
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 131 ARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSRQINHLSA 159
++ +V IM N+E+VL+R + LS LD++AN L + ++ + L+M L+A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKY--LNMRSTYAKLAA 198
Query: 160 V 160
V
Sbjct: 199 V 199
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 131 ARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSRQINHLSA 159
++ +V IM N+E+VL+R + LS LD++AN L + ++ + L+M L+A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKY--LNMRSTYAKLAA 198
Query: 160 V 160
V
Sbjct: 199 V 199
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 131 ARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSRQINHLSA 159
++ +V IM N+E+VL+R + LS LD++AN L + ++ + L+M L+A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKY--LNMRSTYAKLAA 198
Query: 160 V 160
V
Sbjct: 199 V 199
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 28 AQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRAGNLGKMDGGF 77
A++ L ++ +V IM N+E+VL+R + LS LD +A NL + +
Sbjct: 131 ARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 QVDEVVGIMRVNVEKVLERDQKLSELDNRANALQQGASQFEHVPTFHGLSMSRQINHLSA 159
++ +V IM N+E+VL+R + LS LD++AN L + ++ + L+M L+A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKY--LNMRSTYAKLAA 198
Query: 160 V 160
V
Sbjct: 199 V 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,534,728
Number of Sequences: 539616
Number of extensions: 2270158
Number of successful extensions: 8663
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 8343
Number of HSP's gapped (non-prelim): 477
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)