BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5727
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O18405|SURF4_DROME Surfeit locus protein 4 homolog OS=Drosophila melanogaster GN=Surf4
PE=2 SV=1
Length = 270
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 227/291 (78%), Gaps = 23/291 (7%)
Query: 13 INKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHC 72
I +YIA+ E A++V + K LPT++R CLI+TF EDGLRM+ QWNEQREYMD+SW C
Sbjct: 3 IPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSWGC 62
Query: 73 GYFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALF 132
G FL ++FV++NL+GQLGGC +V+ A F +V +AVG LF
Sbjct: 63 GKFLATVFVLVNLLGQLGGCGMVM----------ARF-------------KVDIAVGLLF 99
Query: 133 FIVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQ 192
FIV+LQT+AY IL DFQFL+RN AL+GALLLVLA+++ E RS+FAGVPS+G+NKPKN+MQ
Sbjct: 100 FIVVLQTVAYSILWDFQFLLRNFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQ 159
Query: 193 LAGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIY 252
LAGR LLAFM+ITL+RFE++ QVIQD+ G+ LMVLV +GYKTKLSALILV +L+ LN+Y
Sbjct: 160 LAGRILLAFMFITLIRFELSVWQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLY 219
Query: 253 YNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
+N WW IP+ K +RDFLKYDFFQTLSVIGGLLMIV GPG VSMD+HKK W
Sbjct: 220 HNAWWTIPSYKPLRDFLKYDFFQTLSVIGGLLMIVSLGPGGVSMDEHKKKW 270
>sp|O57590|SURF4_TAKRU Surfeit locus protein 4 OS=Takifugu rubripes GN=surf4 PE=3 SV=1
Length = 269
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 207/290 (71%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
+D + RAE AD+ + TK YLP ++R CLISTFLEDG+RMWFQWNEQR+Y++ +W CG
Sbjct: 3 QEDLMNRAEDVADQFLRVTKQYLPHLARLCLISTFLEDGIRMWFQWNEQRDYIEATWSCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
YFL + FV++NLIGQLGGC+L +L + V A LF
Sbjct: 63 YFLATCFVLLNLIGQLGGCVL-----------------------ILSRNFVQYACFGLFG 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQT+AY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVPS+G++ PK YMQL
Sbjct: 100 IIALQTVAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPSMGESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F+ F ++Q+L GTAL++LV IG+KTKL+AL LVL L +N+Y+
Sbjct: 160 GGRVLLVLMFMTLLHFDFNFFSILQNLVGTALIILVAIGFKTKLAALTLVLWLLVINVYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W IPA K M DFLKYDFFQT SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTIPAYKPMHDFLKYDFFQTTSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|Q800K9|SURF4_CHICK Surfeit locus protein 4 OS=Gallus gallus GN=SURF4 PE=2 SV=1
Length = 269
Score = 307 bits (786), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 207/290 (71%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
D ++ AE FAD+ + TK YLP ++R CLISTFLEDG+RMWFQW+EQR+Y+D +W+CG
Sbjct: 3 QNDIMSTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDGTWNCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
YFL S+FV INL GQL GCIL VL + V A LF
Sbjct: 63 YFLASIFVFINLFGQLSGCIL-----------------------VLSRNFVQYACFGLFG 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQTIAY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVP++ ++ PK YMQL
Sbjct: 100 IIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F++ F ++Q++ GTAL++LV IG+KTKL+AL LV+ L +NIY+
Sbjct: 160 GGRVLLVLMFMTLLHFDMNFFYILQNIVGTALIILVAIGFKTKLAALTLVIWLFGINIYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W IPA K M DFLKYDFFQT+SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTIPAYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|Q7SZQ7|SURF4_DANRE Surfeit locus protein 4 OS=Danio rerio GN=surf4 PE=2 SV=1
Length = 269
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 207/290 (71%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
+D ++ AE AD+ + TK YLP ++R CLISTFLEDG+RMWFQW+EQR+Y++ +W CG
Sbjct: 3 QEDMMSAAEDLADQFLRVTKQYLPHMARLCLISTFLEDGIRMWFQWSEQRDYIEATWSCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
YFL + FV+INLIGQ+GGC+L VL + V A LF
Sbjct: 63 YFLATCFVIINLIGQIGGCVL-----------------------VLSRNLVQYACFGLFC 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQT+AY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVPS+G++ PK YMQL
Sbjct: 100 IIALQTVAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPSMGESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F+ F ++Q++ GTAL++LV +G+KTKL+AL LV+ L +N+Y+
Sbjct: 160 GGRVLLVLMFMTLLHFDSDFFSILQNMVGTALIILVAVGFKTKLAALTLVVWLLAINVYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W +PA K M DFLKYDFFQT SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTVPAYKPMHDFLKYDFFQTTSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|Q5R705|SURF4_PONAB Surfeit locus protein 4 OS=Pongo abelii GN=SURF4 PE=2 SV=1
Length = 269
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 205/290 (70%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
D + AE FAD+ + TK YLP ++R CLISTFLEDG+RMWFQW+EQR+Y+D +W+CG
Sbjct: 3 QNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
Y L S FV +NL+GQL GC+LVL + V A C LF
Sbjct: 63 YLLASSFVFLNLLGQLTGCVLVLSRNFVQYA----------CF-------------GLFG 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQTIAY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVP++ ++ PK YMQL
Sbjct: 100 IIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F+ +F ++Q++ GTALM+LV IG+KTKL+AL LV+ L +N+Y+
Sbjct: 160 GGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W IP K M DFLKYDFFQT+SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|O15260|SURF4_HUMAN Surfeit locus protein 4 OS=Homo sapiens GN=SURF4 PE=1 SV=3
Length = 269
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 205/290 (70%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
D + AE FAD+ + TK YLP ++R CLISTFLEDG+RMWFQW+EQR+Y+D +W+CG
Sbjct: 3 QNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
Y L S FV +NL+GQL GC+LVL + V A C LF
Sbjct: 63 YLLASSFVFLNLLGQLTGCVLVLSRNFVQYA----------CF-------------GLFG 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQTIAY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVP++ ++ PK YMQL
Sbjct: 100 IIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F+ +F ++Q++ GTALM+LV IG+KTKL+AL LV+ L +N+Y+
Sbjct: 160 GGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W IP K M DFLKYDFFQT+SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|Q64310|SURF4_MOUSE Surfeit locus protein 4 OS=Mus musculus GN=Surf4 PE=2 SV=1
Length = 269
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/290 (55%), Positives = 204/290 (70%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
D + AE FAD+ + TK YLP ++R CLISTFLEDG+RMWFQW+EQR+Y+D +W CG
Sbjct: 3 QNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWSCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
Y L S FV +NL+GQL GC+LVL + V A C LF
Sbjct: 63 YLLASSFVFLNLLGQLTGCVLVLSRNFVQYA----------CF-------------GLFG 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQTIAY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVP++ ++ PK YMQL
Sbjct: 100 IIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F+ +F +IQ++ GTALM+LV IG+KTKL+AL LV+ L +N+Y+
Sbjct: 160 GGRVLLVLMFMTLLHFDASFFSIIQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W IP K M DFLKYDFFQT+SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|A7YY49|SURF4_BOVIN Surfeit locus protein 4 OS=Bos taurus GN=SURF4 PE=2 SV=1
Length = 269
Score = 304 bits (779), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 205/290 (70%), Gaps = 23/290 (7%)
Query: 14 NKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCG 73
D + AE FAD+ + TK YLP ++R CLISTFLEDG+RMWFQW+EQR+Y+D +W+CG
Sbjct: 3 QNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCG 62
Query: 74 YFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFF 133
Y L S FV +NL+GQL GCILVL + F+ C LF
Sbjct: 63 YLLASSFVFLNLLGQLTGCILVLSRN----------FVQYACF-------------GLFG 99
Query: 134 IVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL 193
I+ LQTIAY IL D +FLMRNLAL G LLL+LA+S+ E +S+FAGVP++ ++ PK YMQL
Sbjct: 100 IIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQL 159
Query: 194 AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLVLSFLNIYY 253
GR LL M++TLL F+ +F ++Q++ GTALM+LV IG+KTKL+AL LV+ L +N+Y+
Sbjct: 160 GGRVLLVLMFMTLLHFDASFFSILQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYF 219
Query: 254 NCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKNW 303
N +W IP K M DFLKYDFFQT+SVIGGLL++V GPG VSMD+ KK W
Sbjct: 220 NAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
>sp|Q18864|SURF4_CAEEL Surfeit locus protein 4 homolog OS=Caenorhabditis elegans GN=sft-4
PE=2 SV=1
Length = 277
Score = 293 bits (751), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 217/302 (71%), Gaps = 32/302 (10%)
Query: 3 PSGQYSMNSVINKDYIARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQ 62
P GQ M +A+AE A+ ++ T+ YLP I+R CL+STFLEDG+RM+FQW++Q
Sbjct: 7 PGGQNEM--------LAKAEDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQ 58
Query: 63 REYMDLSWHCGYFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQK 122
+++M SW CG+F+ +LFV+ N GQ +P+ ++++L+K
Sbjct: 59 KQFMQESWSCGWFIATLFVIYNFFGQF-----------IPV------------LMIMLRK 95
Query: 123 RVPLAVGALFFIVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSI 182
+V +A G L IV+LQTIAY IL D +FL RN+A+ G LLL+LA++Q+E S+FAGVP++
Sbjct: 96 KVLVACGILASIVILQTIAYHILWDLKFLARNIAVGGGLLLLLAETQEEKASLFAGVPTM 155
Query: 183 GD-NKPKNYMQLAGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALI 241
GD NKPK+YM LAGR LL FM+++L+ FE++F+QV++ + G AL+ LV+IGYKTKLSA++
Sbjct: 156 GDSNKPKSYMLLAGRVLLIFMFMSLMHFEMSFMQVLEIVVGFALITLVSIGYKTKLSAIV 215
Query: 242 LVLVLSFLNIYYNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKK 301
LV+ L LN++ N WW IP+++ RDF+KYDFFQT+SVIGGLL+++ GPG VS+D +KK
Sbjct: 216 LVIWLFGLNLWLNAWWTIPSDRFYRDFMKYDFFQTMSVIGGLLLVIAYGPGGVSVDDYKK 275
Query: 302 NW 303
W
Sbjct: 276 RW 277
>sp|O74559|SURF4_SCHPO Surfeit locus protein 4 homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC970.06 PE=3 SV=1
Length = 302
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 159/296 (53%), Gaps = 37/296 (12%)
Query: 20 RAEIFADRVYQSTK----------AYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLS 69
R + F++R Q + Y+P + R +++T+ ED +R+ QW EQ YM
Sbjct: 28 RKKTFSERACQFMEQAETFMAPFTPYMPLLGRFLIVATYFEDAIRIVTQWPEQVSYMRDY 87
Query: 70 WHCGYFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVG 129
+ L + + C++++L G LV+ +KR A+G
Sbjct: 88 RRFRFGTAPLLLFV--------CVVLMLV---------------GSTLVVFKKRQAYAIG 124
Query: 130 ALFFIVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEAR-SVFAGVPSIGDNKPK 188
+L F+ LLQ AY ++ + RN++++G L LV +D+ R + FAG+P++ ++ +
Sbjct: 125 SLLFVTLLQAFAYGLITSGEMFFRNMSVIGGLCLVASDTFIHRRINRFAGLPAVSEHNKR 184
Query: 189 NYMQLAGRSLLAFMYITLLRFE---VTFLQVIQDLFGTALMVLVTIGYKTKLSALILVLV 245
Y QLAGR LL FM++ LL E +++ +++ + +V IG+K K A +LVL+
Sbjct: 185 TYFQLAGRVLLIFMFLGLLAKEGSGISWTRILVHILSVTACAMVVIGFKAKFFAAVLVLI 244
Query: 246 LSFLNIYYNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKK 301
LS N N +W +P E RDF +YDFFQTLS++GGLL +V GPG S+D+ KK
Sbjct: 245 LSVANFIINSFWSVPRESPYRDFYRYDFFQTLSIVGGLLYLVNTGPGKFSVDEKKK 300
>sp|P53337|ERV29_YEAST ER-derived vesicles protein ERV29 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV29 PE=1 SV=1
Length = 310
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 162/308 (52%), Gaps = 39/308 (12%)
Query: 4 SGQYSMNSVINKDYIARAEIFADRVYQST--------KAYLPTISRACLISTFLEDGLRM 55
S Q S I K + E FA R+ T K Y+P++SR +++TF ED R+
Sbjct: 30 SNQNQSTSGILKQWKHSFEKFASRIEGLTDNAVVYKLKPYIPSLSRFFIVATFYEDSFRI 89
Query: 56 WFQWNEQREYMDLSWHCGYFLGSLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGC 115
QW++Q Y++ H YF +F+++ + L G L++L+K+ A G +L C
Sbjct: 90 LSQWSDQIFYLNKWKHYPYFFVVVFLVVVTVSMLIGASLLVLRKQTNYATG----VLCAC 145
Query: 116 ILVLLQKRVPLAVGALFFIVLLQTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSV 175
V+ Q + Y + F++RN +++G LL+ +DS + ++
Sbjct: 146 -------------------VISQALVYGLFTGSSFVLRNFSVIGGLLIAFSDSIVQNKTT 186
Query: 176 FAGVPSIG--DNKPKNYMQLAGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGY 233
F +P + ++K K Y+ AGR L+ M+I F ++ V+ + GT + IGY
Sbjct: 187 FGMLPELNSKNDKAKGYLLFAGRILIVLMFIA-FTFSKSWFTVVLTIIGT---ICFAIGY 242
Query: 234 KTKLSALILVLVLSFLNIYYNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGS 293
KTK ++++L L+L+F NI N +W K RDFLKY+F+Q LS+IGGLL++ G G
Sbjct: 243 KTKFASIMLGLILTFYNITLNNYWFYNNTK--RDFLKYEFYQNLSIIGGLLLVTNTGAGE 300
Query: 294 VSMDQHKK 301
+S+D+ KK
Sbjct: 301 LSVDEKKK 308
>sp|O45731|YFC7_CAEEL Uncharacterized protein T02E1.7 OS=Caenorhabditis elegans
GN=T02E1.7 PE=3 SV=1
Length = 269
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 151/301 (50%), Gaps = 53/301 (17%)
Query: 18 IARAEIFADRVYQSTKAYLPTISRACLISTFLEDGLRMWFQWNEQREYMDLSWHCGYFLG 77
I R E + + + ++T+ LPTI R LISTF+EDGLR+ F ++ + +W Y
Sbjct: 7 ITRCEDYTETLARNTRKVLPTIGRLLLISTFVEDGLRLLFNTHDHVNHFSYNWGLNYHF- 65
Query: 78 SLFVMINLIGQLGGCILVLLQKRVPLAVGALFFILGGCILVLLQKRVPLAVGALFFIVLL 137
SLF+ I +I L L G + V+++ +V + L F +
Sbjct: 66 SLFLTIVMIINL----------------------LFGSLFVMMRYKVTESSAVLGFTIFA 103
Query: 138 QTIAYKILLDFQFLMRNLALVGALLLVLADSQQEARSVFAGVPSIGDNKPKNYMQL---- 193
Q I Y++ + L RN+++V A++L++A++ + KP NY QL
Sbjct: 104 QVILYQLYTTYHLLTRNISIVAAIMLLVAENM------------LRKPKPANYTQLPRDE 151
Query: 194 -----------AGRSLLAFMYITLLRFEVTFLQVIQDLFGTALMVLVTIGYKTKLSALIL 242
A R L M I+++ F++++ +++ + +M+ V +G+KT++ + +L
Sbjct: 152 HEIEVTSVLLAACRVCLNLMLISMVHFDMSYTRILLCIISYGMMIFVWLGFKTRMMSFML 211
Query: 243 VLVLSFLNIYYNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMIVLRGPGSVSMDQHKKN 302
L NI N +W AE + ++YDFFQTLS IGGLL+++ GPG S D+ KK
Sbjct: 212 ATWLFAYNIVLNDFWNKDAELHI---IRYDFFQTLSAIGGLLLLIHTGPGEFSFDELKKK 268
Query: 303 W 303
W
Sbjct: 269 W 269
>sp|P0AD48|YPHA_SHIFL Inner membrane protein YphA OS=Shigella flexneri GN=yphA PE=3 SV=1
Length = 140
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/73 (19%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 227 VLVTIGYKTKLSALILVLVLSFLNIYYNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMI 286
+L+ +G+ T+ A++ + + + +W + + + + +F++ +S+ G L++
Sbjct: 70 ILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMI--NFWKNVSIAGAFLLL 127
Query: 287 VLRGPGSVSMDQH 299
+ GPG++S+D+
Sbjct: 128 AITGPGAISLDRR 140
>sp|P0AD47|YPHA_ECOLI Inner membrane protein YphA OS=Escherichia coli (strain K12)
GN=yphA PE=1 SV=1
Length = 140
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/73 (19%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 227 VLVTIGYKTKLSALILVLVLSFLNIYYNCWWVIPAEKAMRDFLKYDFFQTLSVIGGLLMI 286
+L+ +G+ T+ A++ + + + +W + + + + +F++ +S+ G L++
Sbjct: 70 ILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMI--NFWKNVSIAGAFLLL 127
Query: 287 VLRGPGSVSMDQH 299
+ GPG++S+D+
Sbjct: 128 AITGPGAISLDRR 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.144 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,168,886
Number of Sequences: 539616
Number of extensions: 3757862
Number of successful extensions: 10819
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 10770
Number of HSP's gapped (non-prelim): 59
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)