Query psy573
Match_columns 216
No_of_seqs 198 out of 1545
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 16:32:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iep_A Muscle-specific kinase 100.0 7.1E-31 2.4E-35 178.9 18.0 183 24-208 7-192 (192)
2 2yd1_A Tyrosine-protein phosph 100.0 5.8E-30 2E-34 177.2 22.5 184 23-208 5-202 (212)
3 2c5d_C AXL oncogene, tyrosine- 100.0 9.2E-30 3.1E-34 173.9 20.4 177 24-204 2-191 (195)
4 2v5t_A NCAM2, N-CAM 2, neural 100.0 8.8E-30 3E-34 173.0 19.2 182 24-206 2-188 (189)
5 1rhf_A Tyrosine-protein kinase 100.0 3.2E-29 1.1E-33 169.4 19.8 176 24-205 2-182 (182)
6 2a38_A Titin; Z1Z2, structural 100.0 1.5E-29 5E-34 172.7 18.1 181 23-205 4-194 (194)
7 1epf_A NCAM, protein (neural c 100.0 6.9E-29 2.4E-33 169.0 21.1 179 24-204 2-189 (191)
8 2j8h_A Titin, connectin; cardi 100.0 2.9E-29 9.8E-34 171.7 18.7 181 23-206 3-197 (197)
9 2v44_A NCAM2, neural cell adhe 100.0 4.9E-29 1.7E-33 169.5 19.7 175 26-204 4-185 (189)
10 2yd6_A PTPRD protein; hydrolas 100.0 3.4E-29 1.2E-33 173.3 19.2 186 23-210 5-208 (212)
11 2rik_A Titin; I-SET IG fold, p 100.0 1.3E-28 4.4E-33 177.6 20.6 191 13-206 88-284 (284)
12 2rik_A Titin; I-SET IG fold, p 100.0 4.7E-28 1.6E-32 174.6 23.4 188 23-212 4-197 (284)
13 3lcy_A Titin; A-BAND, IG tande 100.0 1E-28 3.5E-33 168.8 18.9 180 23-206 6-196 (197)
14 1qz1_A Neural cell adhesion mo 100.0 5.8E-29 2E-33 179.9 18.1 192 13-206 90-290 (291)
15 2wim_A N-CAM 2, NCAM2, neural 100.0 5.4E-29 1.9E-33 180.1 17.8 194 14-209 89-287 (291)
16 2yd9_A Receptor-type tyrosine- 100.0 8.7E-29 3E-33 180.2 18.8 197 13-212 91-297 (304)
17 3k0w_A Mucosa-associated lymph 100.0 2.7E-28 9.3E-33 169.5 20.4 173 24-210 18-206 (218)
18 2v9r_A Roundabout homolog 1; p 100.0 5.3E-29 1.8E-33 172.2 16.4 195 18-213 3-209 (212)
19 2wv3_A Neuroplastin; igcam, me 100.0 4.3E-28 1.5E-32 165.0 20.6 173 25-205 4-189 (190)
20 3laf_A Deleted in colorectal c 100.0 1.7E-28 5.8E-33 185.1 18.4 193 13-208 205-403 (403)
21 2vr9_A Roundabout 1, ROBO; imm 100.0 1.2E-28 4.2E-33 171.0 16.1 186 18-205 3-205 (217)
22 3b43_A Titin; I-SET IG fold, e 100.0 4E-28 1.4E-32 190.7 19.8 197 14-213 281-483 (570)
23 3s97_C Contactin-1; carbonic a 100.0 7.2E-28 2.5E-32 165.1 18.6 177 30-206 14-201 (201)
24 3kld_A Contactin 4, axcam, BIG 100.0 3.4E-28 1.2E-32 182.6 18.0 172 30-206 211-383 (384)
25 3rbs_A Myomesin-1; immunoglobu 100.0 7.4E-28 2.5E-32 165.8 18.3 176 25-205 4-206 (207)
26 1qz1_A Neural cell adhesion mo 100.0 3.7E-27 1.3E-31 170.4 22.7 186 24-211 2-198 (291)
27 4fa8_A Secreted protein BARF1; 100.0 1.1E-28 3.6E-33 169.3 13.2 165 33-198 2-194 (203)
28 2yd9_A Receptor-type tyrosine- 100.0 2.2E-27 7.5E-32 172.8 20.8 180 23-205 5-200 (304)
29 2nzi_A Titin; IG-domain, FNIII 100.0 3.2E-27 1.1E-31 171.9 21.4 185 23-210 3-201 (305)
30 3r4d_A CEA-related cell adhesi 100.0 1.8E-27 6.2E-32 164.0 18.9 181 27-211 2-205 (208)
31 3sgj_C Human FCG3A receptor; r 100.0 3E-27 1E-31 162.5 19.4 168 24-209 7-177 (204)
32 1f97_A Junction adhesion molec 100.0 6.5E-28 2.2E-32 166.6 16.1 180 25-206 2-207 (212)
33 3grw_A Fibroblast growth facto 100.0 1.9E-27 6.5E-32 167.5 18.7 181 31-213 22-225 (241)
34 1bih_A Hemolin; insect immunit 100.0 2.7E-27 9.4E-32 178.0 20.6 173 30-204 218-394 (395)
35 3jz7_A MCAR, CAR, coxsackievir 100.0 4.3E-28 1.5E-32 167.7 14.9 177 30-208 6-214 (214)
36 3ejj_X Macrophage colony-stimu 100.0 1.9E-27 6.6E-32 171.8 18.8 196 12-210 77-285 (289)
37 2va4_A NCAM2, N-CAM 2, neural 100.0 2.3E-27 7.7E-32 161.5 18.1 177 24-205 2-192 (192)
38 2o26_X MAST/stem cell growth f 100.0 9.7E-28 3.3E-32 173.5 16.9 191 13-208 81-290 (290)
39 3b43_A Titin; I-SET IG fold, e 100.0 1.6E-27 5.5E-32 187.3 19.0 187 14-205 375-569 (570)
40 1fnl_A Low affinity immunoglob 100.0 7.9E-27 2.7E-31 156.8 19.6 165 24-206 7-174 (175)
41 3p3y_A Neurofascin; IG domains 100.0 5E-27 1.7E-31 177.0 20.4 170 33-206 231-403 (404)
42 2x1w_L Vascular endothelial gr 100.0 3.1E-27 1.1E-31 163.6 17.7 177 30-210 13-211 (213)
43 2jll_A NCAM2, neural cell adhe 100.0 8.9E-27 3E-31 174.9 21.2 183 25-210 2-198 (389)
44 1cs6_A Axonin-1; neural cell a 100.0 2.8E-27 9.7E-32 177.3 17.8 176 24-206 206-382 (382)
45 3laf_A Deleted in colorectal c 100.0 8.4E-27 2.9E-31 175.8 19.9 198 13-212 111-317 (403)
46 3ojm_B Fibroblast growth facto 100.0 5.5E-27 1.9E-31 164.0 17.5 187 24-212 15-227 (231)
47 1uct_A Immunoglobulin alpha FC 100.0 3.7E-27 1.3E-31 163.6 16.3 181 24-208 9-200 (218)
48 2ec8_A MAST/stem cell growth f 100.0 3.1E-27 1.1E-31 184.0 17.5 200 12-213 196-418 (524)
49 2r15_A Myomesin-1; sarcomeric 100.0 2.1E-26 7.1E-31 159.2 19.2 171 36-207 14-211 (212)
50 3qs9_E FL cytokine receptor; i 100.0 6.5E-28 2.2E-32 187.4 12.6 191 16-213 222-421 (527)
51 1f2q_A High affinity immunoglo 100.0 8.8E-27 3E-31 156.7 15.8 168 24-209 4-174 (176)
52 1oll_A NK receptor; immune sys 99.9 5.3E-27 1.8E-31 159.4 14.4 177 24-205 4-187 (188)
53 2wim_A N-CAM 2, NCAM2, neural 99.9 2.5E-26 8.7E-31 166.0 18.5 184 24-211 4-196 (291)
54 1nbq_A JAM, junctional adhesio 99.9 8.9E-28 3.1E-32 165.6 10.3 178 25-204 5-207 (209)
55 1ugn_A LIR1, leukocyte immunog 99.9 1.4E-26 4.8E-31 158.5 16.0 177 24-205 5-197 (198)
56 2gi7_A GPVI protein; IG-like d 99.9 1.3E-26 4.5E-31 156.9 15.5 157 24-194 8-168 (184)
57 3kld_A Contactin 4, axcam, BIG 99.9 6.2E-26 2.1E-30 170.3 20.4 203 9-212 87-300 (384)
58 3qs7_E FL cytokine receptor; i 99.9 3.2E-27 1.1E-31 179.1 13.5 177 30-211 233-419 (423)
59 2d3v_A Leukocyte immunoglobuli 99.9 2.9E-27 1E-31 161.7 12.0 166 24-194 5-180 (196)
60 3p2t_A Leukocyte immunoglobuli 99.9 6.7E-27 2.3E-31 159.9 13.8 177 24-205 5-195 (196)
61 4dkd_C Macrophage colony-stimu 99.9 1.3E-26 4.5E-31 167.6 15.5 193 13-209 78-284 (292)
62 2v5m_A Dscam; neurobiology SPL 99.9 3E-26 1E-30 172.0 16.9 164 32-204 220-387 (388)
63 4fqp_A Poliovirus receptor; im 99.9 3.8E-26 1.3E-30 166.9 16.2 189 16-209 110-307 (313)
64 2fbo_J V1V2;, variable region- 99.9 2.4E-26 8.3E-31 162.7 14.7 173 30-203 8-249 (250)
65 2ny1_B T-cell surface glycopro 99.9 1E-25 3.4E-30 152.5 16.9 162 33-210 4-183 (184)
66 1itb_B Type 1 interleukin-1 re 99.9 9.6E-26 3.3E-30 164.8 17.4 188 17-206 93-314 (315)
67 3p3y_A Neurofascin; IG domains 99.9 6.3E-26 2.2E-30 171.0 16.8 200 12-212 104-317 (404)
68 3b5h_A Cervical EMMPRIN, HAB18 99.9 4.7E-25 1.6E-29 149.2 19.3 162 34-206 8-183 (184)
69 3oq3_B IFN-alpha/beta binding 99.9 2.9E-25 9.8E-30 163.4 19.4 177 24-204 128-328 (329)
70 1cs6_A Axonin-1; neural cell a 99.9 9.2E-26 3.2E-30 169.1 17.1 199 12-212 89-299 (382)
71 3ry4_A Low affinity immunoglob 99.9 3.1E-25 1E-29 148.2 17.5 162 25-204 5-169 (170)
72 1vca_A VCAM-D1,2, human vascul 99.9 3.1E-26 1.1E-30 157.2 12.9 178 27-210 3-201 (202)
73 1ry7_B FGFR-3, fibroblast grow 99.9 9.1E-26 3.1E-30 166.2 16.2 177 33-211 132-332 (334)
74 2ifg_A High affinity nerve gro 99.9 3.2E-27 1.1E-31 175.0 8.1 178 24-208 158-347 (347)
75 2ec8_A MAST/stem cell growth f 99.9 1.2E-25 4.3E-30 174.9 17.4 196 13-212 104-315 (524)
76 3bp6_B Programmed cell death 1 99.9 8.2E-26 2.8E-30 155.2 14.5 171 30-208 8-195 (202)
77 1hng_A CD2; T lymphocyte adhes 99.9 1.4E-25 5E-30 150.6 14.3 160 33-204 5-174 (176)
78 1p6f_A NKP46, natural cytotoxi 99.9 1.7E-25 5.8E-30 157.5 15.3 180 24-208 7-193 (242)
79 3mj8_L Stimulatory hamster ant 99.9 4.4E-26 1.5E-30 157.7 11.9 174 26-201 3-208 (213)
80 3dmk_A DOWN syndrome cell adhe 99.9 3.9E-25 1.3E-29 180.3 19.2 194 14-208 609-811 (816)
81 1e07_A Carcinoembryonic antige 99.9 2.2E-24 7.6E-29 171.6 22.3 180 16-206 458-640 (642)
82 3sbw_C Programmed cell death 1 99.9 5.2E-25 1.8E-29 153.2 16.0 177 30-209 7-214 (222)
83 3rjd_A High affinity immunoglo 99.9 3.3E-24 1.1E-28 152.7 20.2 165 25-207 2-168 (262)
84 3mj6_A Junctional adhesion mol 99.9 1E-24 3.5E-29 155.9 17.5 178 25-207 6-238 (268)
85 3o4o_C Interleukin-1 receptor 99.9 1.7E-25 5.9E-30 165.1 13.4 182 23-207 17-221 (339)
86 4fom_A Poliovirus receptor-rel 99.9 1.6E-26 5.4E-31 168.5 7.5 196 14-210 103-304 (308)
87 4dep_C Interleukin-1 receptor 99.9 1.6E-25 5.6E-30 165.9 12.1 196 15-213 108-341 (349)
88 3d9a_L Light chain of hyhel10 99.9 2.4E-25 8.2E-30 154.0 12.2 173 27-200 4-207 (213)
89 2y25_A Myomesin; structural pr 99.9 3.6E-25 1.2E-29 161.8 13.5 173 33-207 107-316 (317)
90 4i0k_A CD276 antigen; immunogl 99.9 3.6E-25 1.2E-29 154.0 12.8 177 32-212 3-212 (222)
91 2if7_A SLAM family member 6; N 99.9 2.6E-24 8.8E-29 146.7 16.6 161 30-200 4-186 (193)
92 2y23_A Myomesin; structural pr 99.9 1.2E-24 3.9E-29 158.8 15.9 178 24-205 106-311 (312)
93 4dep_C Interleukin-1 receptor 99.9 3E-24 1E-28 159.0 17.9 173 31-206 14-217 (349)
94 2v5m_A Dscam; neurobiology SPL 99.9 1.4E-24 4.8E-29 163.0 16.1 198 13-212 93-312 (388)
95 3u83_A Poliovirus receptor-rel 99.9 1.2E-24 4.1E-29 160.0 15.3 192 13-210 120-324 (331)
96 1jbj_A CD3 epsilon and gamma e 99.9 8.6E-25 2.9E-29 148.2 12.9 145 34-196 9-179 (186)
97 2ocw_A Polymeric-immunoglobuli 99.9 7.9E-24 2.7E-28 166.8 20.4 191 14-208 322-548 (585)
98 1lk3_L 9D7 light chain; antige 99.9 1.3E-24 4.4E-29 150.1 13.9 165 31-196 7-202 (210)
99 2zg1_A Sialic acid-binding IG- 99.9 5E-24 1.7E-28 147.4 16.4 170 29-203 5-212 (214)
100 3oq3_B IFN-alpha/beta binding 99.9 7.4E-25 2.5E-29 161.2 12.6 171 32-208 37-226 (329)
101 3rjd_A High affinity immunoglo 99.9 1.1E-23 3.7E-28 150.0 18.2 168 14-196 74-249 (262)
102 1e07_A Carcinoembryonic antige 99.9 1.6E-23 5.4E-28 166.8 20.7 188 9-209 366-560 (642)
103 3nl4_L Antigen binding fragmen 99.9 4E-24 1.4E-28 147.8 14.9 165 25-190 2-198 (213)
104 4frw_A Poliovirus receptor-rel 99.9 4E-24 1.4E-28 147.9 14.5 175 30-205 5-210 (218)
105 4f80_A Butyrophilin subfamily 99.9 4.6E-24 1.6E-28 148.9 14.6 172 32-207 12-214 (226)
106 2o26_X MAST/stem cell growth f 99.9 8.1E-24 2.8E-28 152.9 16.3 167 23-205 11-182 (290)
107 1ry7_B FGFR-3, fibroblast grow 99.9 2.5E-25 8.4E-30 163.9 8.3 177 26-207 10-217 (334)
108 2pet_A Lutheran blood group gl 99.9 1.5E-24 5.1E-29 151.7 11.5 162 30-192 6-211 (231)
109 2y25_A Myomesin; structural pr 99.9 3.6E-25 1.2E-29 161.8 8.6 178 24-205 7-199 (317)
110 3r06_A Anti-mouse CD3epsilon a 99.9 6.1E-24 2.1E-28 146.9 14.3 172 25-197 2-204 (213)
111 3u83_A Poliovirus receptor-rel 99.9 9.6E-24 3.3E-28 155.2 16.2 188 24-212 14-236 (331)
112 3sob_L Antibody light chain; b 99.9 5.5E-24 1.9E-28 149.4 14.1 174 25-199 25-229 (237)
113 3mjg_X Beta-type platelet-deri 99.9 2.8E-23 9.4E-28 150.0 18.0 167 34-210 105-282 (289)
114 3o4o_C Interleukin-1 receptor 99.9 6.5E-25 2.2E-29 162.0 9.4 191 14-205 109-334 (339)
115 2oz4_A Intercellular adhesion 99.9 4.1E-24 1.4E-28 152.7 13.2 172 14-207 89-265 (265)
116 1nkr_A P58-CL42 KIR; inhibitor 99.9 3E-23 1E-27 142.3 16.7 162 24-192 8-183 (201)
117 1q0x_L FAB 9B1, light chain; a 99.9 7.9E-24 2.7E-28 146.3 13.7 172 27-200 4-209 (212)
118 2c1o_A IGK-C protein; FAB frag 99.9 4.5E-24 1.6E-28 151.5 12.2 172 24-196 38-245 (254)
119 3uzq_A Anti-dengue MAB 4E11; d 99.9 2.9E-23 1E-27 147.3 16.3 183 27-210 4-248 (253)
120 3dmk_A DOWN syndrome cell adhe 99.9 3.4E-23 1.2E-27 168.9 18.9 193 15-212 519-719 (816)
121 2ocw_A Polymeric-immunoglobuli 99.9 5.9E-23 2E-27 161.8 19.6 178 29-208 5-223 (585)
122 1wio_A CD4, T-cell surface gly 99.9 1.6E-23 5.3E-28 156.1 15.5 158 34-205 106-292 (363)
123 3tv3_L PGT128 light chain, IG 99.9 1.2E-24 4.2E-29 150.2 8.8 166 33-201 9-206 (211)
124 1nqb_A Single-chain antibody f 99.9 4.7E-23 1.6E-27 146.5 17.0 179 29-208 5-235 (256)
125 1bih_A Hemolin; insect immunit 99.9 2.7E-24 9.3E-29 161.7 10.9 175 24-199 6-193 (395)
126 1hnf_A CD2; T lymphocyte adhes 99.9 1.3E-22 4.4E-27 136.6 17.9 157 31-202 6-177 (182)
127 3umt_A SCFV heavy chain and li 99.9 3.8E-23 1.3E-27 147.0 16.0 179 30-209 8-248 (256)
128 1dr9_A B7-1 (CD80), T lymphocy 99.9 8.9E-23 3.1E-27 139.9 17.3 166 33-202 3-197 (201)
129 4fom_A Poliovirus receptor-rel 99.9 2.6E-23 8.9E-28 151.5 15.4 182 31-212 6-216 (308)
130 3qs7_E FL cytokine receptor; i 99.9 9.6E-24 3.3E-28 160.1 13.5 167 34-211 149-328 (423)
131 3s96_B 3B5H10 FAB light chain; 99.9 5.7E-24 2E-28 147.5 11.1 173 26-200 3-214 (218)
132 3auv_A SC-DSFV derived from th 99.9 9E-23 3.1E-27 146.6 17.2 168 24-192 12-235 (276)
133 1sy6_A T-cell surface glycopro 99.9 7E-24 2.4E-28 145.7 10.9 152 36-205 15-203 (204)
134 3esu_F Antibody 14B7* light ch 99.9 1.5E-22 5E-27 143.4 17.7 166 25-191 5-231 (250)
135 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 7.8E-23 2.7E-27 145.3 15.9 181 26-208 5-250 (256)
136 2wng_A Tyrosine-protein phosph 99.9 8.6E-24 3E-28 155.3 11.1 168 26-195 5-205 (327)
137 2xzc_L FAB A.17 light chain; i 99.9 3.4E-23 1.2E-27 143.5 13.5 169 31-199 7-208 (216)
138 3vh8_G Killer cell immunoglobu 99.9 4.1E-23 1.4E-27 151.0 14.7 175 24-206 24-215 (316)
139 3v2a_R Vascular endothelial gr 99.9 7.6E-26 2.6E-30 183.3 0.0 196 14-212 541-762 (772)
140 1b6u_A KIR2DL3, P58 killer cel 99.9 3.1E-23 1.1E-27 147.1 13.3 180 24-210 7-205 (257)
141 2dru_A Chimera of CD48 antigen 99.9 1.4E-22 4.8E-27 136.5 15.7 155 32-201 7-176 (180)
142 2p1y_A Bispecific alpha/beta T 99.9 2.3E-22 7.9E-27 141.3 17.3 165 27-193 3-222 (238)
143 2ghw_B Anti-SARS SCFV antibody 99.9 3.1E-22 1.1E-26 141.4 18.0 175 30-205 8-241 (247)
144 2rcj_C Light chain; immunoglob 99.9 9E-23 3.1E-27 158.8 16.5 193 14-209 101-319 (523)
145 1z7z_I Intercellular adhesion 99.9 1.8E-23 6.1E-28 159.9 12.0 172 14-207 274-450 (450)
146 1z7z_I Intercellular adhesion 99.9 3.5E-22 1.2E-26 152.8 19.2 189 12-208 74-284 (450)
147 3eow_R Poliovirus receptor; im 99.9 1.2E-23 4E-28 146.4 9.8 174 31-205 6-211 (221)
148 2y23_A Myomesin; structural pr 99.9 1.3E-22 4.5E-27 147.9 15.8 165 31-199 8-195 (312)
149 1mju_H Immunoglobulin MS6-12; 99.9 8.1E-23 2.8E-27 142.7 13.9 178 30-209 6-220 (227)
150 3ejj_X Macrophage colony-stimu 99.9 1.1E-22 3.7E-27 146.8 14.8 171 24-205 4-180 (289)
151 3bkj_L WO2 IGG2A FAB fragment 99.9 3.3E-23 1.1E-27 146.9 11.8 171 25-196 35-241 (252)
152 3pv7_A B7-H6, IG-like domain-c 99.9 5.8E-23 2E-27 145.3 12.9 173 30-205 9-225 (248)
153 3vh8_G Killer cell immunoglobu 99.9 1.3E-22 4.6E-27 148.3 15.3 189 13-208 106-315 (316)
154 1c1e_H Catalytic antibody 1E9 99.9 6.5E-23 2.2E-27 142.4 12.8 171 30-202 6-216 (219)
155 1wio_A CD4, T-cell surface gly 99.9 4.6E-23 1.6E-27 153.5 12.7 161 33-209 3-181 (363)
156 1f3r_B FV antibody fragment; I 99.9 4.3E-23 1.5E-27 146.7 12.0 178 30-208 6-247 (257)
157 4fmk_A Poliovirus receptor-rel 99.9 8.3E-23 2.8E-27 141.9 13.1 174 31-205 8-218 (225)
158 1pz5_B Heavy chain of FAB (SYA 99.9 1.1E-22 3.9E-27 141.3 13.6 170 30-201 6-216 (220)
159 2rcj_C Light chain; immunoglob 99.9 4.4E-22 1.5E-26 155.0 18.3 173 29-202 5-210 (523)
160 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 1E-22 3.6E-27 141.7 13.3 170 31-202 7-219 (222)
161 1moe_A Anti-CEA MAB T84.66; an 99.9 3.7E-22 1.3E-26 140.4 16.0 165 26-191 3-219 (240)
162 2znx_A SCFV; fluorotryptohpan, 99.9 5.3E-22 1.8E-26 139.9 16.2 167 26-193 3-223 (242)
163 1ccz_A Protein (CD58); LFA-3, 99.9 5.9E-22 2E-26 132.3 15.6 150 33-202 4-167 (171)
164 1qok_A MFE-23 recombinant anti 99.9 9.5E-22 3.3E-26 141.6 17.8 178 27-206 29-268 (282)
165 3juy_B 3B3 single chain varian 99.9 3.6E-22 1.2E-26 141.9 15.2 170 24-194 6-244 (256)
166 3qs9_E FL cytokine receptor; i 99.9 9.6E-23 3.3E-27 158.4 12.9 168 34-210 149-327 (527)
167 3omz_A Human vdelta1 gamma del 99.9 3.8E-22 1.3E-26 142.0 14.9 184 25-209 3-253 (259)
168 1nfd_E H57 FAB; complex (immun 99.9 6E-24 2.1E-28 146.9 5.4 167 31-198 6-204 (212)
169 4fqp_A Poliovirus receptor; im 99.9 2.3E-22 7.9E-27 146.9 14.0 184 28-212 4-221 (313)
170 3gkz_A Anti-methamphetamine si 99.9 1.5E-21 5.3E-26 138.7 17.6 179 29-208 13-251 (257)
171 2j6e_L IGM, FAB light chain; a 99.9 4.9E-23 1.7E-27 144.4 9.2 170 31-200 26-229 (234)
172 2wng_A Tyrosine-protein phosph 99.9 2.5E-23 8.6E-28 152.9 7.9 185 14-202 107-316 (327)
173 1itb_B Type 1 interleukin-1 re 99.9 5.6E-23 1.9E-27 150.1 9.2 171 32-205 13-201 (315)
174 4dkd_C Macrophage colony-stimu 99.9 1E-22 3.4E-27 147.2 10.2 176 24-211 4-190 (292)
175 3d9a_H Heavy chain of hyhel10 99.9 4.6E-22 1.6E-26 137.3 13.0 167 30-200 6-208 (210)
176 3ux9_B SCFV antibody; five hel 99.9 7E-22 2.4E-26 140.4 14.3 162 30-193 8-236 (256)
177 2oz4_A Intercellular adhesion 99.9 1.9E-21 6.4E-26 138.8 16.3 161 34-211 13-187 (265)
178 1svz_A Immunoglobulin;, single 99.9 1.9E-21 6.3E-26 137.5 16.0 166 26-192 3-228 (247)
179 1dee_B IGM RF 2A2; FAB-IBP com 99.9 4E-21 1.4E-25 133.8 16.9 169 31-200 7-221 (223)
180 2fbj_H IGA-kappa J539 FAB (hea 99.9 2.4E-21 8.3E-26 134.6 15.7 165 31-197 7-212 (220)
181 2gjj_A A21 single-chain antibo 99.9 2.8E-21 9.5E-26 137.9 16.2 167 25-192 6-239 (264)
182 3bqu_C 3H6 FAB light chain; be 99.9 9.2E-24 3.2E-28 148.0 3.1 170 25-195 24-224 (233)
183 4dzb_B Vbeta2 (MAIT T cell rec 99.9 1E-21 3.5E-26 138.7 12.5 171 26-197 3-222 (246)
184 2gki_A Nuclease; anti-DNA anti 99.9 3.2E-21 1.1E-25 139.5 15.1 180 28-208 26-274 (291)
185 1qgc_4 Protein (immunoglobulin 99.9 5.7E-22 1.9E-26 151.0 11.7 170 27-197 4-208 (438)
186 3fku_X Neutralizing antibody F 99.9 1.9E-21 6.5E-26 139.9 13.8 176 31-208 7-252 (280)
187 1op3_H FAB 2G12, heavy chain; 99.9 2.5E-21 8.6E-26 135.0 13.6 165 31-197 7-216 (225)
188 1qgc_4 Protein (immunoglobulin 99.9 5E-22 1.7E-26 151.3 10.7 189 14-205 104-337 (438)
189 3pl6_D MBP peptide / T-cell re 99.9 2.8E-21 9.7E-26 138.1 13.8 169 25-195 27-241 (268)
190 1dn0_B IGM-kappa cold agglutin 99.9 9.4E-21 3.2E-25 132.7 15.9 175 30-205 6-226 (232)
191 1x9q_A SCFV, 4M5.3 anti-fluore 99.9 3.2E-21 1.1E-25 137.9 13.4 168 24-192 15-254 (268)
192 3m8o_H Immunoglobulin A1 heavy 99.9 3.1E-20 1.1E-24 129.1 16.9 163 31-196 7-213 (221)
193 3nfj_J T cell receptor beta ch 99.9 2.4E-21 8.3E-26 136.7 11.3 170 27-197 4-221 (245)
194 3bae_H WO2 IGG2A FAB fragment 99.9 7.3E-21 2.5E-25 132.9 13.6 169 31-201 7-221 (228)
195 2rgs_A I, IG gamma-2B heavy ch 99.9 1.7E-22 5.7E-27 140.3 4.7 171 24-195 9-205 (218)
196 3nl4_H Antigen binding fragmen 99.9 3.7E-21 1.3E-25 133.2 11.4 173 30-203 5-211 (215)
197 3q5y_A TCR N15 beta; IG, T cel 99.9 2.2E-20 7.6E-25 131.4 15.5 169 25-195 3-213 (240)
198 4ei6_B Vbeta16 XV19 type II na 99.9 1.7E-20 5.9E-25 132.3 15.0 169 25-195 3-219 (245)
199 1za6_B IGG heavy chain; immuno 99.9 3.6E-21 1.2E-25 142.4 11.6 165 30-197 6-208 (344)
200 1hxm_B Gamma-delta T-cell rece 99.9 7.1E-21 2.4E-25 134.1 11.9 176 26-204 3-227 (242)
201 3v2a_R Vascular endothelial gr 99.9 8.7E-20 3E-24 147.9 19.8 196 13-211 111-331 (772)
202 3mtr_A N-CAM-1, NCAM-1, neural 99.9 1.2E-20 4.1E-25 130.6 12.5 181 23-208 18-211 (215)
203 3liz_H 4C3 monoclonal antibody 99.8 9.2E-21 3.1E-25 134.4 11.2 173 31-205 7-219 (253)
204 1gsm_A Madcam-1, mucosal addre 99.8 8.6E-20 2.9E-24 124.5 15.3 152 34-195 17-194 (210)
205 2vol_A Murine IGG FC; FC, zinc 99.8 1.3E-21 4.3E-26 134.8 6.1 157 36-195 15-197 (207)
206 3qib_D 2B4 beta chain; IG doma 99.8 3E-20 1E-24 132.9 13.3 169 25-195 28-244 (270)
207 2wbj_D OB TCR; transmembrane, 99.8 3.2E-20 1.1E-24 133.5 13.3 171 25-196 25-246 (279)
208 2xqy_G A13-D6.3 monoclonal ant 99.8 7.1E-20 2.4E-24 130.3 14.8 170 29-200 11-219 (261)
209 1c5d_H Monoclonal antibody aga 99.8 9.7E-20 3.3E-24 126.1 15.0 168 31-200 7-210 (215)
210 3bn9_D E2 FAB heavy chain; ant 99.8 3.5E-20 1.2E-24 131.5 11.9 169 31-201 7-225 (257)
211 1hzh_H IGG, immunoglobulin hea 99.8 7.2E-20 2.5E-24 140.3 14.1 172 30-203 6-226 (457)
212 3o3u_N Maltose-binding peripla 99.8 5.6E-20 1.9E-24 144.8 13.1 162 32-195 374-566 (581)
213 3to4_D NKT vbeta2 (mouse varia 99.8 1.2E-19 4.2E-24 128.6 13.5 167 28-195 5-219 (253)
214 2wqr_A IG epsilon chain C regi 99.8 7.2E-21 2.5E-25 139.6 6.0 161 30-195 119-309 (323)
215 1igt_B IGG2A intact antibody - 99.8 1.4E-19 4.9E-24 138.1 13.3 171 30-202 6-215 (444)
216 1l6x_A Immunoglobulin gamma-1 99.8 8.7E-21 3E-25 130.6 4.8 169 25-195 2-197 (207)
217 1igt_B IGG2A intact antibody - 99.8 1.7E-20 5.9E-25 143.2 6.8 177 16-196 112-331 (444)
218 3mjg_X Beta-type platelet-deri 99.8 3.4E-19 1.1E-23 128.6 13.2 165 27-206 3-178 (289)
219 1bec_A 14.3.D T cell antigen r 99.8 9.4E-19 3.2E-23 123.0 14.9 167 27-195 2-212 (238)
220 1i1c_A IGG2A, IG gamma-2A chai 99.8 8.6E-21 2.9E-25 133.3 4.4 170 25-195 16-211 (239)
221 1ypz_F T-cell receptor gamma c 99.8 2.3E-19 7.8E-24 125.4 11.5 166 27-195 4-216 (230)
222 1iga_A IGA1; immunoglobulin; N 99.8 4.5E-18 1.5E-22 131.0 18.6 166 28-195 5-215 (475)
223 2wqr_A IG epsilon chain C regi 99.8 1.5E-20 5E-25 137.9 4.1 172 24-196 7-204 (323)
224 2w59_A IGY FCU3-4; immunoglobu 99.8 2.2E-20 7.4E-25 130.7 4.8 162 29-195 18-217 (231)
225 1oga_E TRBC1, T-cell receptor 99.8 6.6E-19 2.3E-23 124.8 12.5 169 26-196 5-219 (252)
226 3n9g_H FAB fragment of MAB CR4 99.8 1E-18 3.4E-23 122.2 12.9 173 31-206 7-225 (230)
227 3qhz_H Human monoclonal antibo 99.8 2.5E-19 8.7E-24 125.4 9.8 172 31-204 7-227 (232)
228 3tv3_H PGT128 heavy chain, IG 99.8 4.7E-19 1.6E-23 124.6 10.9 173 30-204 6-235 (239)
229 3u2s_H PG9 heavy chain; greek 99.8 6.4E-19 2.2E-23 124.5 11.5 176 29-205 4-237 (248)
230 3knb_B Obscurin-like protein 1 99.8 1.3E-18 4.5E-23 106.8 11.1 92 117-208 12-107 (107)
231 1igy_B IGG1 intact antibody MA 99.8 1.9E-19 6.5E-24 137.1 8.6 170 30-202 5-211 (434)
232 1iga_A IGA1; immunoglobulin; N 99.8 2.3E-18 7.7E-23 132.6 14.5 184 14-202 114-341 (475)
233 1hzh_H IGG, immunoglobulin hea 99.8 5E-19 1.7E-23 135.6 7.5 180 15-197 120-341 (457)
234 1ypz_E T cell receptor delta, 99.8 4.1E-18 1.4E-22 117.2 11.3 164 27-195 4-198 (207)
235 3sob_H Antibody heavy chain, l 99.8 9.7E-18 3.3E-22 119.0 12.5 173 30-205 29-250 (256)
236 1za6_B IGG heavy chain; immuno 99.8 3.7E-19 1.3E-23 131.6 5.2 177 15-195 108-330 (344)
237 3iu4_H CHP3 FAB heavy chain; a 99.8 3.4E-18 1.1E-22 121.8 9.5 170 31-204 7-222 (263)
238 3knb_A Titin; IG-like, titin, 99.8 2.1E-17 7.1E-22 100.2 11.2 89 118-206 5-99 (100)
239 2aty_A Complement receptor chi 99.8 1.3E-17 4.3E-22 124.8 12.4 159 36-195 180-362 (376)
240 1igy_B IGG1 intact antibody MA 99.7 6.2E-20 2.1E-24 139.8 -0.4 177 15-196 107-321 (434)
241 1mq8_A ICAM-1, intercellular a 99.7 2.1E-19 7.1E-24 129.0 2.0 195 11-209 73-285 (291)
242 3mlr_H Human monoclonal anti-H 99.7 7E-18 2.4E-22 117.6 9.6 169 31-202 7-222 (226)
243 2cqv_A MLCK, myosin light chai 99.7 4.4E-17 1.5E-21 101.3 12.0 95 118-212 7-105 (114)
244 1zvo_C Myeloma immunoglobulin 99.7 2.3E-16 7.8E-21 122.5 17.8 171 24-197 296-494 (512)
245 3knb_B Obscurin-like protein 1 99.7 1.1E-17 3.8E-22 102.6 8.4 95 23-119 12-107 (107)
246 3knb_A Titin; IG-like, titin, 99.7 1.8E-17 6.1E-22 100.5 8.2 92 23-116 4-98 (100)
247 4acp_A IG gamma-1 chain C regi 99.7 2.2E-18 7.6E-23 120.9 4.8 167 29-195 28-218 (240)
248 2edj_A Roundabout homolog 2; K 99.7 7.5E-17 2.6E-21 97.9 10.4 92 117-208 7-100 (100)
249 1zvo_C Myeloma immunoglobulin 99.7 6.2E-16 2.1E-20 120.1 18.1 169 30-200 6-226 (512)
250 3kvq_A Vascular endothelial gr 99.7 4.1E-17 1.4E-21 100.5 9.0 100 111-210 3-104 (108)
251 2jll_A NCAM2, neural cell adhe 99.7 1.6E-16 5.3E-21 119.2 13.9 179 13-198 90-280 (389)
252 2kkq_A Myotilin; unknown funct 99.7 1.4E-16 4.9E-21 99.3 10.9 98 115-212 12-115 (116)
253 2kdg_A Myotilin; immonoglobuli 99.7 1.6E-16 5.3E-21 96.4 10.5 92 117-208 4-100 (100)
254 3shs_A HOC head outer capsid p 99.7 1.6E-15 5.5E-20 105.1 15.8 165 25-205 3-182 (304)
255 1g1c_A Immunoglobulin-like dom 99.7 3.2E-16 1.1E-20 94.9 11.0 90 117-206 4-98 (99)
256 2nzi_A Titin; IG-domain, FNIII 99.7 3.8E-16 1.3E-20 113.4 13.4 152 32-197 112-281 (305)
257 3irg_B Obscurin-like protein 1 99.7 3E-16 1E-20 96.4 10.9 94 115-208 10-107 (107)
258 3qp3_A Titin; I-SET IG-like, s 99.7 1.5E-16 5.1E-21 97.1 9.3 93 115-207 5-101 (103)
259 2yr3_A Myosin light chain kina 99.7 1.7E-16 6E-21 96.1 9.1 92 114-205 7-99 (99)
260 1wit_A Twitchin 18TH IGSF modu 99.7 2.7E-16 9.2E-21 94.1 9.4 88 118-205 2-93 (93)
261 3u1s_H FAB PGT145 heavy chain; 99.7 2.5E-16 8.6E-21 112.4 10.8 172 30-204 29-263 (267)
262 2e7c_A Myosin-binding protein 99.7 5.9E-16 2E-20 96.8 11.3 94 115-208 18-117 (118)
263 2eo9_A Roundabout homolog 1; b 99.7 2.5E-16 8.5E-21 98.5 9.2 93 118-210 8-102 (118)
264 3f8u_B Tapasin; endoplasmic re 99.7 6.8E-16 2.3E-20 114.2 12.8 175 26-201 160-399 (401)
265 1ow0_A IG alpha-1 chain C regi 99.7 8.7E-19 3E-23 121.2 -2.5 162 28-195 8-200 (214)
266 1u2h_A APEG-1, aortic preferen 99.7 7.9E-16 2.7E-20 93.1 10.9 90 117-206 4-98 (99)
267 2kdg_A Myotilin; immonoglobuli 99.7 4.6E-16 1.6E-20 94.3 9.8 92 24-117 5-98 (100)
268 1hxm_A Gamma-delta T-cell rece 99.7 1.3E-15 4.5E-20 106.1 13.4 165 27-195 4-199 (229)
269 1fhg_A Telokin; immunoglobulin 99.7 4.3E-16 1.5E-20 102.0 10.0 100 112-211 35-139 (154)
270 2edj_A Roundabout homolog 2; K 99.7 6.7E-16 2.3E-20 93.6 10.1 92 24-118 8-99 (100)
271 3puc_A Titin; I-SET IG-like do 99.7 1.1E-15 3.8E-20 92.4 10.8 90 117-206 5-98 (99)
272 2ckn_A Basic fibroblast growth 99.7 6.1E-16 2.1E-20 92.9 9.1 85 119-204 10-94 (95)
273 2eo9_A Roundabout homolog 1; b 99.7 6.8E-16 2.3E-20 96.5 9.3 93 24-119 8-100 (118)
274 1iam_A ICAM-1, CD54, intercell 99.7 9.3E-15 3.2E-19 97.6 15.1 159 27-195 2-167 (185)
275 2dm2_A Palladin; beta-sandwich 99.7 8.3E-16 2.8E-20 94.9 8.9 95 117-211 7-107 (110)
276 3irg_A Titin; IG-like, titin, 99.6 1.7E-15 5.7E-20 91.8 9.9 89 118-206 5-99 (100)
277 2kkq_A Myotilin; unknown funct 99.6 1.2E-15 4E-20 95.1 9.3 95 23-120 14-112 (116)
278 1g1c_A Immunoglobulin-like dom 99.6 1.4E-15 4.9E-20 91.9 9.5 92 23-116 4-97 (99)
279 2dm3_A KIAA0992 protein, palla 99.6 3.9E-16 1.3E-20 96.4 6.9 95 117-211 8-107 (110)
280 2cqv_A MLCK, myosin light chai 99.6 1.4E-15 4.9E-20 94.4 9.5 94 23-120 6-102 (114)
281 2yuz_A Myosin-binding protein 99.6 1.5E-15 5.3E-20 91.9 9.2 88 24-119 7-97 (100)
282 3irg_B Obscurin-like protein 1 99.6 7.6E-16 2.6E-20 94.6 7.8 95 21-119 10-107 (107)
283 2v5y_A Receptor-type tyrosine- 99.6 2.8E-15 9.7E-20 121.1 13.0 163 39-211 91-265 (731)
284 3kvq_A Vascular endothelial gr 99.6 1.5E-15 5.2E-20 93.4 8.8 101 16-120 3-103 (108)
285 1wwb_X Protein (brain derived 99.6 2.1E-15 7.2E-20 91.9 9.0 79 131-209 14-101 (103)
286 1u2h_A APEG-1, aortic preferen 99.6 2.6E-15 8.8E-20 90.8 9.1 90 24-116 5-97 (99)
287 1gxe_A Myosin binding protein 99.6 2.2E-15 7.4E-20 96.5 8.8 81 125-205 25-138 (139)
288 2yuz_A Myosin-binding protein 99.6 2.2E-15 7.4E-20 91.3 8.4 88 118-209 7-98 (100)
289 2bk8_A Connectin, M1, titin he 99.6 9.8E-15 3.4E-19 87.9 11.1 86 121-206 4-94 (97)
290 3cx2_A Myosin-binding protein 99.6 7.4E-15 2.5E-19 90.3 10.6 87 119-205 5-107 (108)
291 3irg_A Titin; IG-like, titin, 99.6 2.1E-15 7.1E-20 91.3 8.1 91 24-116 5-98 (100)
292 3qp3_A Titin; I-SET IG-like, s 99.6 4.6E-15 1.6E-19 90.4 9.6 92 24-117 8-100 (103)
293 2dm3_A KIAA0992 protein, palla 99.6 9E-16 3.1E-20 94.7 6.5 95 23-119 8-104 (110)
294 1nct_A Titin; cell adhesion, g 99.6 1.2E-15 4E-20 93.5 6.7 89 117-205 13-105 (106)
295 1fhg_A Telokin; immunoglobulin 99.6 3.9E-15 1.3E-19 97.5 9.5 99 24-124 41-141 (154)
296 1he7_A High affinity nerve gro 99.6 3.5E-15 1.2E-19 93.2 8.7 78 132-209 14-102 (126)
297 2dm2_A Palladin; beta-sandwich 99.6 5.8E-15 2E-19 91.1 9.5 93 24-119 8-104 (110)
298 2cr3_A Basic fibroblast growth 99.6 3.8E-15 1.3E-19 90.1 8.3 83 126-209 11-93 (99)
299 2yr3_A Myosin light chain kina 99.6 2E-15 6.9E-20 91.3 7.0 89 23-115 10-98 (99)
300 3bfo_A Mucosa-associated lymph 99.6 1.3E-14 4.3E-19 86.4 10.2 83 119-206 4-87 (91)
301 2dav_A SLOW MYBP-C, myosin-bin 99.6 4.4E-15 1.5E-19 92.8 8.4 87 120-206 9-111 (126)
302 4hwu_A Fibroblast growth facto 99.6 7.9E-15 2.7E-19 88.0 9.0 83 125-209 8-90 (95)
303 1waa_A Titin; metal binding pr 99.6 1.6E-14 5.5E-19 86.1 10.1 87 23-116 4-91 (93)
304 2v9r_A Roundabout homolog 1; p 99.6 3.4E-15 1.2E-19 102.6 8.2 111 13-125 100-210 (212)
305 2edh_A Obscurin; structural ge 99.6 2.4E-14 8.2E-19 88.7 11.2 98 108-211 8-110 (113)
306 1wwc_A Protein (NT-3 growth fa 99.6 3.8E-15 1.3E-19 93.1 7.6 96 112-210 2-105 (118)
307 2cr6_A KIAA1556 protein, obscu 99.6 1.5E-15 5E-20 94.5 5.6 105 14-124 3-109 (115)
308 2e7c_A Myosin-binding protein 99.6 8.8E-15 3E-19 91.4 9.1 93 24-119 21-117 (118)
309 2edh_A Obscurin; structural ge 99.6 6.1E-15 2.1E-19 91.4 8.3 97 13-119 8-107 (113)
310 3bfo_A Mucosa-associated lymph 99.6 1.4E-14 4.9E-19 86.1 9.4 83 25-116 4-86 (91)
311 2lu7_A Obscurin-like protein 1 99.6 1.5E-14 5.3E-19 84.4 9.2 80 31-117 3-83 (84)
312 1wit_A Twitchin 18TH IGSF modu 99.6 2.9E-15 9.8E-20 89.6 6.2 88 24-115 2-92 (93)
313 3puc_A Titin; I-SET IG-like do 99.6 1.6E-14 5.6E-19 87.2 9.5 89 24-116 6-97 (99)
314 1mq8_A ICAM-1, intercellular a 99.6 2E-14 7E-19 103.2 11.4 174 27-209 2-189 (291)
315 3s35_X Vascular endothelial gr 99.6 1.4E-14 4.6E-19 91.1 9.4 87 126-212 16-116 (122)
316 2eny_A Obscurin; beta-sandwich 99.6 7.5E-15 2.6E-19 89.6 7.7 95 19-119 3-99 (104)
317 2dav_A SLOW MYBP-C, myosin-bin 99.6 8.9E-15 3.1E-19 91.4 8.0 91 25-117 8-111 (126)
318 3m45_A Cell adhesion molecule 99.6 2.8E-14 9.7E-19 87.5 10.2 92 116-208 4-108 (108)
319 1gl4_B Basement membrane-speci 99.6 7.2E-14 2.4E-18 84.2 11.8 80 125-205 17-97 (98)
320 3bn3_B ICAM-5, intercellular a 99.6 5.1E-14 1.8E-18 94.8 12.1 161 25-194 3-174 (196)
321 3caf_A Fibroblast growth facto 99.6 1.5E-14 5.1E-19 87.6 8.7 79 126-204 16-99 (100)
322 1waa_A Titin; metal binding pr 99.6 4.3E-14 1.5E-18 84.3 10.4 84 118-206 5-92 (93)
323 2edn_A Myosin-binding protein 99.6 3.7E-15 1.3E-19 92.1 5.8 88 120-207 14-117 (118)
324 2v9t_A Roundabout homolog 1; s 99.6 1.2E-14 4E-19 90.7 8.1 100 18-118 3-110 (117)
325 3cx2_A Myosin-binding protein 99.6 2.2E-14 7.6E-19 88.1 9.2 91 24-116 4-107 (108)
326 2ckn_A Basic fibroblast growth 99.6 1.1E-14 3.6E-19 87.4 7.1 87 23-115 8-94 (95)
327 1nct_A Titin; cell adhesion, g 99.6 4.6E-15 1.6E-19 90.9 5.2 89 24-116 14-105 (106)
328 2edn_A Myosin-binding protein 99.6 4.8E-15 1.7E-19 91.6 5.3 94 22-117 10-116 (118)
329 2v9t_A Roundabout homolog 1; s 99.6 3.7E-14 1.2E-18 88.4 9.3 92 116-207 7-110 (117)
330 2xot_A Amphoterin-induced prot 99.5 2.3E-14 8E-19 106.5 9.6 107 30-151 252-360 (361)
331 2lu7_A Obscurin-like protein 1 99.5 2.6E-14 9E-19 83.4 7.9 77 126-207 4-84 (84)
332 1x44_A Myosin-binding protein 99.5 4E-14 1.4E-18 86.2 8.9 88 25-119 8-98 (103)
333 2cr6_A KIAA1556 protein, obscu 99.5 1.1E-14 3.8E-19 90.5 6.5 97 111-211 5-107 (115)
334 2ens_A Advanced glycosylation 99.5 1.9E-14 6.5E-19 86.5 7.2 84 24-116 10-94 (96)
335 2e6p_A Obscurin-like protein 1 99.5 6.2E-14 2.1E-18 85.5 9.6 89 24-119 7-99 (104)
336 2cry_A KIN of IRRE-like protei 99.5 4.8E-16 1.6E-20 97.8 -0.2 99 109-208 5-115 (122)
337 2bk8_A Connectin, M1, titin he 99.5 1.3E-13 4.5E-18 82.9 10.4 86 27-116 4-93 (97)
338 1x44_A Myosin-binding protein 99.5 5.5E-14 1.9E-18 85.6 8.8 86 121-211 10-101 (103)
339 2edf_A Obscurin; beta-sandwich 99.5 4.1E-14 1.4E-18 86.1 7.8 89 118-211 8-100 (103)
340 2iep_A Muscle-specific kinase 99.5 3.5E-14 1.2E-18 96.0 8.2 102 14-119 91-192 (192)
341 2c1o_A IGK-C protein; FAB frag 99.5 5.2E-14 1.8E-18 99.5 9.4 115 87-205 11-149 (254)
342 2lvc_A Obscurin-like protein 1 99.5 6.5E-14 2.2E-18 83.0 8.2 65 35-101 17-82 (91)
343 2edk_A Myosin-binding protein 99.5 8.5E-15 2.9E-19 88.9 4.4 91 21-118 5-100 (101)
344 3so5_A LIG-3, leucine-rich rep 99.5 9.2E-14 3.1E-18 85.7 9.2 89 116-204 8-111 (112)
345 3m45_A Cell adhesion molecule 99.5 8E-14 2.7E-18 85.5 8.6 93 24-119 6-108 (108)
346 2edf_A Obscurin; beta-sandwich 99.5 4.6E-14 1.6E-18 85.9 7.3 88 23-119 7-97 (103)
347 3caf_A Fibroblast growth facto 99.5 5E-14 1.7E-18 85.2 7.4 90 24-115 4-99 (100)
348 2dlt_A Myosin binding protein 99.5 6.5E-14 2.2E-18 85.7 7.7 89 23-116 7-96 (106)
349 2j8h_A Titin, connectin; cardi 99.5 3E-13 1E-17 91.8 11.8 95 117-211 3-103 (197)
350 2ens_A Advanced glycosylation 99.5 2.9E-14 1E-18 85.6 5.9 82 119-205 11-94 (96)
351 2yd6_A PTPRD protein; hydrolas 99.5 5.9E-13 2E-17 91.6 13.2 92 116-207 4-101 (212)
352 2cpc_A KIAA0657 protein; immun 99.5 1.9E-13 6.7E-18 84.5 9.7 94 25-125 11-108 (113)
353 2vr9_A Roundabout 1, ROBO; imm 99.5 1.1E-13 3.8E-18 95.5 9.2 102 13-114 97-204 (217)
354 2yuv_A Myosin-binding protein 99.5 3.1E-13 1.1E-17 81.7 10.2 87 118-209 7-98 (100)
355 2e7b_A Obscurin; IG-like domai 99.5 1.6E-13 5.6E-18 83.4 9.0 88 23-119 7-97 (103)
356 2qsq_A Carcinoembryonic antige 99.5 3.7E-13 1.3E-17 82.7 10.4 90 27-117 3-109 (111)
357 1gxe_A Myosin binding protein 99.5 1E-13 3.5E-18 88.7 8.2 82 31-115 25-137 (139)
358 3rbg_A Cytotoxic and regulator 99.5 1.8E-13 6.3E-18 86.1 9.2 84 125-209 8-104 (124)
359 2yuv_A Myosin-binding protein 99.5 3.5E-13 1.2E-17 81.5 9.9 89 24-119 7-97 (100)
360 2e7b_A Obscurin; IG-like domai 99.5 1.2E-13 4E-18 84.1 7.8 88 118-210 8-99 (103)
361 3qr2_A Basigin; CD147, EMMPRIN 99.5 6.7E-13 2.3E-17 85.0 11.7 82 115-196 18-116 (137)
362 2v44_A NCAM2, neural cell adhe 99.5 9.2E-14 3.2E-18 93.8 8.1 92 13-106 86-177 (189)
363 3rbg_A Cytotoxic and regulator 99.5 1.6E-13 5.6E-18 86.3 8.6 90 28-120 5-104 (124)
364 1z9m_A GAPA225; nectin-like, I 99.5 1.6E-13 5.5E-18 88.8 8.8 87 123-210 43-142 (145)
365 3lcy_A Titin; A-BAND, IG tande 99.5 4.7E-13 1.6E-17 90.8 11.5 96 116-211 5-104 (197)
366 3so5_A LIG-3, leucine-rich rep 99.5 2.2E-13 7.4E-18 84.0 9.0 93 23-115 9-111 (112)
367 2dku_A KIAA1556 protein; beta- 99.5 3.2E-13 1.1E-17 82.1 9.5 87 24-119 8-97 (103)
368 2eny_A Obscurin; beta-sandwich 99.5 1.4E-13 4.9E-18 83.8 7.7 88 119-210 9-101 (104)
369 2e6q_A Obscurin-like protein 1 99.5 1.2E-12 4.3E-17 80.2 11.9 88 118-210 8-109 (112)
370 3s35_X Vascular endothelial gr 99.5 1E-13 3.4E-18 87.1 7.2 97 27-125 10-118 (122)
371 2e6p_A Obscurin-like protein 1 99.5 9.9E-14 3.4E-18 84.6 6.9 88 119-211 8-102 (104)
372 2edk_A Myosin-binding protein 99.5 4E-14 1.4E-18 85.9 5.1 86 118-208 8-101 (101)
373 2dlt_A Myosin binding protein 99.5 1.4E-13 4.8E-18 84.2 7.6 85 118-205 8-96 (106)
374 1epf_A NCAM, protein (neural c 99.5 1.4E-13 5E-18 93.0 7.9 89 14-104 91-179 (191)
375 2a38_A Titin; Z1Z2, structural 99.5 8.9E-13 3E-17 89.2 11.7 90 117-206 4-99 (194)
376 4hwu_A Fibroblast growth facto 99.5 7.5E-13 2.6E-17 79.2 10.1 83 30-119 7-89 (95)
377 2cr3_A Basic fibroblast growth 99.5 1.5E-13 5E-18 83.1 6.9 83 30-118 9-91 (99)
378 2k1m_A Myosin-binding protein 99.5 1.1E-12 3.7E-17 78.5 10.7 73 25-99 9-82 (95)
379 2yd1_A Tyrosine-protein phosph 99.5 2.2E-12 7.5E-17 88.7 13.6 91 117-207 5-103 (212)
380 2e6q_A Obscurin-like protein 1 99.5 1.1E-12 3.7E-17 80.5 10.7 89 24-119 8-107 (112)
381 2cpc_A KIAA0657 protein; immun 99.5 3.2E-13 1.1E-17 83.5 8.5 80 128-212 23-106 (113)
382 1he7_A High affinity nerve gro 99.5 2.2E-13 7.4E-18 85.1 7.6 80 38-119 14-101 (126)
383 2wv3_A Neuroplastin; igcam, me 99.5 7.4E-13 2.5E-17 89.5 10.8 92 118-212 3-97 (190)
384 2lvc_A Obscurin-like protein 1 99.5 2.5E-13 8.6E-18 80.5 7.4 79 120-203 6-90 (91)
385 2dm7_A KIAA1556 protein; beta- 99.5 5.1E-13 1.7E-17 82.0 9.1 88 117-210 7-98 (108)
386 3mtr_A N-CAM-1, NCAM-1, neural 99.5 6.8E-13 2.3E-17 91.5 10.7 94 117-211 18-117 (215)
387 2dku_A KIAA1556 protein; beta- 99.5 5.5E-13 1.9E-17 81.1 8.9 89 118-211 8-100 (103)
388 1gl4_B Basement membrane-speci 99.5 2.9E-13 1E-17 81.5 7.6 87 24-115 9-96 (98)
389 1pd6_A Cardiac MYBP-C;, myosin 99.5 4.7E-13 1.6E-17 81.5 8.4 83 118-205 15-103 (104)
390 1wwb_X Protein (brain derived 99.4 5.6E-13 1.9E-17 81.0 8.4 81 37-119 14-100 (103)
391 2cry_A KIN of IRRE-like protei 99.4 5.1E-15 1.8E-19 93.0 -1.0 101 13-117 4-113 (122)
392 2k1m_A Myosin-binding protein 99.4 7.9E-13 2.7E-17 79.2 8.6 82 119-205 9-94 (95)
393 2dm7_A KIAA1556 protein; beta- 99.4 2.6E-13 8.9E-18 83.3 6.3 87 23-119 7-96 (108)
394 1pd6_A Cardiac MYBP-C;, myosin 99.4 1.1E-12 3.7E-17 79.9 8.9 74 24-100 15-92 (104)
395 3r4d_A CEA-related cell adhesi 99.4 6.4E-13 2.2E-17 91.0 8.9 101 14-120 100-203 (208)
396 2va4_A NCAM2, N-CAM 2, neural 99.4 2.7E-12 9.2E-17 86.6 11.8 94 118-211 2-99 (192)
397 1fnl_A Low affinity immunoglob 99.4 2.4E-12 8.1E-17 85.9 11.2 96 13-117 79-174 (175)
398 3c6l_A TCR 2W20 alpha chain; T 99.1 1.3E-14 4.4E-19 97.4 0.0 155 27-188 3-182 (185)
399 1f2q_A High affinity immunoglo 99.4 7E-13 2.4E-17 88.5 8.5 99 13-120 76-174 (176)
400 4f9l_D 20.1 anti-BTN3A1 antibo 99.4 6.8E-12 2.3E-16 86.2 13.0 164 27-191 4-231 (259)
401 2c5d_C AXL oncogene, tyrosine- 99.4 2.9E-12 9.9E-17 86.9 11.2 95 118-212 2-111 (195)
402 2eys_A NKT15; natural killer T 99.4 4.3E-12 1.5E-16 87.1 12.0 157 26-194 5-188 (210)
403 3q0h_A T cell immunoreceptor w 99.4 1.2E-12 4.2E-17 81.4 8.5 92 29-121 8-112 (117)
404 2eo1_A OBSCN protein, cDNA FLJ 99.4 1.6E-12 5.5E-17 78.8 8.8 79 32-119 19-100 (102)
405 1ntl_A CRRY-IG; immunology, co 99.4 3.9E-12 1.3E-16 99.6 12.5 160 36-195 355-537 (551)
406 1vca_A VCAM-D1,2, human vascul 99.4 2.6E-12 8.7E-17 87.8 10.2 81 129-209 12-93 (202)
407 3qr2_A Basigin; CD147, EMMPRIN 99.4 3.3E-13 1.1E-17 86.5 5.4 83 23-106 20-116 (137)
408 2v5t_A NCAM2, N-CAM 2, neural 99.4 5.4E-12 1.9E-16 84.9 11.7 94 118-211 2-100 (189)
409 1z9m_A GAPA225; nectin-like, I 99.4 1.4E-12 4.8E-17 84.3 8.4 99 16-120 30-141 (145)
410 3sgj_C Human FCG3A receptor; r 99.4 2.9E-12 9.8E-17 87.7 10.2 98 13-119 79-176 (204)
411 3k0w_A Mucosa-associated lymph 99.4 1.6E-12 5.6E-17 89.8 9.0 98 13-119 93-204 (218)
412 1rhf_A Tyrosine-protein kinase 99.4 2E-12 6.7E-17 86.7 8.9 94 12-115 87-181 (182)
413 3b5h_A Cervical EMMPRIN, HAB18 99.4 4.3E-12 1.5E-16 85.2 10.5 100 14-116 74-182 (184)
414 1f97_A Junction adhesion molec 99.4 4.3E-12 1.5E-16 87.0 10.5 91 120-211 3-108 (212)
415 3rgv_A YAE62 TCR A chain; TCR, 99.4 8.2E-13 2.8E-17 89.5 6.7 130 27-162 3-155 (200)
416 2qsq_A Carcinoembryonic antige 99.4 6.8E-12 2.3E-16 77.0 10.1 80 128-207 10-110 (111)
417 1ugn_A LIR1, leukocyte immunog 99.4 5.1E-12 1.7E-16 86.0 10.4 89 13-104 88-181 (198)
418 1wwc_A Protein (NT-3 growth fa 99.4 9.8E-13 3.4E-17 82.0 5.8 78 40-119 21-103 (118)
419 2r15_A Myomesin-1; sarcomeric 99.4 8.4E-12 2.9E-16 85.6 10.9 86 30-117 123-210 (212)
420 3zyj_A Leucine-rich repeat-con 99.4 4.9E-12 1.7E-16 96.5 10.5 93 118-211 341-438 (440)
421 3ry4_A Low affinity immunoglob 99.4 5.8E-12 2E-16 83.5 9.5 94 13-115 76-169 (170)
422 1jhl_L IGG1-kappa D11.15 FV (l 99.4 1.2E-11 4E-16 75.8 10.0 76 27-103 4-94 (108)
423 2x1w_L Vascular endothelial gr 99.3 1.7E-12 5.8E-17 89.4 6.7 105 15-121 94-211 (213)
424 3ojm_B Fibroblast growth facto 99.3 4.4E-12 1.5E-16 88.1 8.7 83 126-208 27-114 (231)
425 4fa8_A Secreted protein BARF1; 99.3 4.6E-12 1.6E-16 86.6 8.4 86 127-212 2-111 (203)
426 3q0h_A T cell immunoreceptor w 99.3 1.3E-11 4.5E-16 76.7 9.7 86 125-210 10-112 (117)
427 3udw_C Poliovirus receptor; PV 99.3 4.3E-12 1.5E-16 78.9 7.5 88 31-119 7-118 (118)
428 2v5y_A Receptor-type tyrosine- 99.3 2.3E-11 7.9E-16 98.4 13.7 167 24-197 165-345 (731)
429 1gsm_A Madcam-1, mucosal addre 99.3 3.1E-11 1.1E-15 82.3 12.1 82 128-212 17-101 (210)
430 2id5_A Lingo-1, leucine rich r 99.3 4E-12 1.4E-16 97.9 8.4 82 125-206 392-477 (477)
431 3p2t_A Leukocyte immunoglobuli 99.3 6.3E-12 2.2E-16 85.3 8.5 87 118-206 5-96 (196)
432 1zxq_A ICAM-2, intercellular a 99.3 4.1E-11 1.4E-15 80.0 11.9 158 25-193 3-172 (192)
433 3rbs_A Myomesin-1; immunoglobu 99.3 2.9E-12 9.9E-17 87.9 6.5 79 24-106 117-197 (207)
434 3khq_A B-cell antigen receptor 99.3 8.1E-12 2.8E-16 79.4 7.9 96 25-123 18-123 (133)
435 3bp6_B Programmed cell death 1 99.3 3E-11 1E-15 82.3 11.3 86 123-208 7-105 (202)
436 2nw2_A ELS4 TCR alpha chain; T 99.3 4.3E-11 1.5E-15 81.5 11.7 153 31-194 6-182 (200)
437 3r08_E T-cell surface glycopro 99.3 3.4E-12 1.2E-16 73.2 5.2 61 30-101 5-66 (82)
438 2gi7_A GPVI protein; IG-like d 99.3 1.9E-11 6.4E-16 82.2 9.6 82 117-206 7-90 (184)
439 1uct_A Immunoglobulin alpha FC 99.3 1E-11 3.5E-16 85.8 8.1 101 13-118 93-199 (218)
440 2q20_A VK1 O18/O8 germline lig 99.3 4.3E-11 1.5E-15 73.4 10.0 76 26-102 5-95 (109)
441 2eo1_A OBSCN protein, cDNA FLJ 99.3 7.6E-12 2.6E-16 75.8 6.5 77 127-208 20-100 (102)
442 2fbo_J V1V2;, variable region- 99.3 7.8E-12 2.7E-16 88.0 7.5 92 15-107 124-240 (250)
443 1nbq_A JAM, junctional adhesio 99.3 1E-11 3.6E-16 84.8 7.7 93 118-211 4-111 (209)
444 1sy6_A T-cell surface glycopro 99.3 8.9E-12 3E-16 85.3 7.3 76 37-115 126-202 (204)
445 1oll_A NK receptor; immune sys 99.3 1.2E-11 4.1E-16 83.5 7.9 97 13-115 86-186 (188)
446 1b6u_A KIR2DL3, P58 killer cel 99.3 3.6E-12 1.2E-16 90.2 5.5 139 12-156 93-240 (257)
447 2edo_A CD48 antigen; beta-sand 99.3 7E-12 2.4E-16 78.4 6.2 87 32-118 12-111 (121)
448 3zyi_A Leucine-rich repeat-con 99.3 7.1E-12 2.4E-16 95.9 7.5 92 118-211 352-448 (452)
449 3udw_C Poliovirus receptor; PV 99.3 5.6E-11 1.9E-15 73.8 10.2 83 126-208 8-118 (118)
450 3s97_C Contactin-1; carbonic a 99.3 1.5E-11 5E-16 83.6 8.2 88 24-116 113-200 (201)
451 2ny1_B T-cell surface glycopro 99.3 3.9E-11 1.3E-15 80.6 10.1 78 31-119 104-181 (184)
452 1xau_A B- and T-lymphocyte att 99.3 4.5E-11 1.5E-15 70.7 8.8 84 34-117 24-116 (122)
453 1h5b_A Murine T cell receptor 99.3 5.3E-11 1.8E-15 73.5 9.8 76 27-104 4-95 (113)
454 2xot_A Amphoterin-induced prot 99.3 3.9E-11 1.3E-15 89.2 10.9 82 125-208 253-339 (361)
455 2vsd_A CHIR AB1; immune system 99.3 3.1E-12 1.1E-16 78.0 4.1 74 24-103 5-79 (105)
456 4f9p_D 103.2 anti-BTN3A1 antib 99.3 4.2E-10 1.4E-14 77.0 14.7 158 33-192 9-229 (254)
457 1pko_A Myelin oligodendrocyte 99.3 1.5E-10 5.1E-15 74.2 12.1 85 124-208 12-123 (139)
458 2d3v_A Leukocyte immunoglobuli 99.3 2.1E-11 7.1E-16 82.8 8.4 88 117-206 4-96 (196)
459 1eaj_A Coxsackie virus and ade 99.3 2.4E-11 8.1E-16 76.3 8.1 82 125-206 12-125 (126)
460 1hng_A CD2; T lymphocyte adhes 99.3 2.5E-11 8.5E-16 81.0 8.5 80 128-207 6-100 (176)
461 1eaj_A Coxsackie virus and ade 99.3 1.7E-11 5.7E-16 77.0 7.1 85 30-116 11-124 (126)
462 3r08_E T-cell surface glycopro 99.3 3.1E-12 1.1E-16 73.4 3.2 60 125-191 6-66 (82)
463 1mqk_L Antibody 7E2 FV fragmen 99.2 8.6E-11 3E-15 73.3 9.9 90 27-117 4-109 (120)
464 1qfw_M FV, antibody (anti beta 99.2 9.8E-11 3.3E-15 71.7 9.6 75 27-102 4-93 (108)
465 3gsn_A RA14 TCR alpha chain (T 99.2 1.4E-11 4.8E-16 83.4 6.2 128 27-160 3-153 (199)
466 3uto_A Twitchin; kinase, muscl 99.2 9.4E-11 3.2E-15 92.0 11.7 88 118-205 482-573 (573)
467 4hwn_A FC receptor-like A; FCR 99.2 7.9E-11 2.7E-15 72.0 8.9 72 24-104 8-84 (108)
468 3grw_A Fibroblast growth facto 99.2 5E-11 1.7E-15 83.4 9.1 81 126-206 23-108 (241)
469 2e27_L Anti-ciguatoxin antibod 99.2 1.3E-10 4.3E-15 72.4 9.9 76 26-102 5-95 (119)
470 3mbe_C I-AG7; T cell receptor, 99.2 3.9E-11 1.3E-15 82.8 8.1 127 26-159 3-153 (229)
471 2ak4_D SB27 T cell receptor al 99.2 7.7E-12 2.6E-16 85.9 4.6 161 27-193 6-196 (211)
472 4gos_A V-SET domain-containing 99.2 1.1E-10 3.9E-15 73.3 9.6 80 126-205 13-119 (125)
473 2ptt_A CD48 antigen; CD244, CD 99.2 1.2E-10 4.2E-15 71.4 9.6 83 32-116 11-107 (110)
474 2or8_A Hepatitis A virus cellu 99.2 6.3E-11 2.2E-15 73.4 8.2 75 30-104 3-97 (116)
475 4ei6_A Valpha1 XV19 type II na 99.2 2.4E-11 8.3E-16 82.6 6.6 131 26-162 4-160 (208)
476 2pet_A Lutheran blood group gl 99.2 4.7E-11 1.6E-15 82.9 8.2 86 124-209 6-117 (231)
477 4hwn_A FC receptor-like A; FCR 99.2 3.7E-11 1.3E-15 73.5 6.8 86 117-207 7-100 (108)
478 3zyj_A Leucine-rich repeat-con 99.2 6.7E-11 2.3E-15 90.2 9.7 93 24-119 341-435 (440)
479 3jz7_A MCAR, CAR, coxsackievir 99.2 5.8E-11 2E-15 81.3 8.5 88 125-212 7-126 (214)
480 3umt_A SCFV heavy chain and li 99.2 5.4E-11 1.8E-15 84.2 8.5 95 24-119 138-247 (256)
481 1i8k_A Epidermal growth factor 99.2 1.1E-10 3.9E-15 71.2 8.7 75 27-102 4-93 (107)
482 1pko_A Myelin oligodendrocyte 99.2 1.2E-10 4.2E-15 74.6 9.2 85 31-117 13-121 (139)
483 2ifg_A High affinity nerve gro 99.2 1E-12 3.4E-17 97.2 -0.8 115 91-210 136-253 (347)
484 1i3g_L Antibody FV fragment; a 99.2 1E-10 3.5E-15 71.9 8.3 76 26-102 6-96 (111)
485 1p6f_A NKP46, natural cytotoxi 99.2 6.6E-11 2.2E-15 83.1 8.4 100 13-118 89-192 (242)
486 2bnu_A TCR alpha chain, T-cell 99.2 9.5E-11 3.3E-15 80.0 8.9 118 27-150 3-147 (203)
487 2yc1_B Single chain antibody f 99.2 2.1E-10 7E-15 73.9 9.8 94 25-119 17-125 (146)
488 2oyp_A Hepatitis A virus cellu 99.2 1E-10 3.4E-15 71.6 8.1 82 33-116 3-107 (109)
489 2if7_A SLAM family member 6; N 99.2 1E-10 3.4E-15 79.3 8.8 84 125-208 5-108 (193)
490 3tjh_C 42F3 alpha; IG MHC, ant 99.2 3.6E-11 1.2E-15 82.7 6.6 131 26-162 11-168 (226)
491 3khq_A B-cell antigen receptor 99.2 9E-11 3.1E-15 74.5 7.9 88 121-210 20-121 (133)
492 3mj8_L Stimulatory hamster ant 99.2 1.5E-10 5E-15 79.5 9.6 83 122-205 5-108 (213)
493 2q87_A CMRF35-H antigen; all-b 99.2 7.9E-11 2.7E-15 72.3 7.3 89 31-119 3-108 (110)
494 1ymm_D T cell receptor alpha c 99.2 1.5E-12 5E-17 89.2 -0.6 159 27-193 4-191 (207)
495 1i1r_A GP130, interleukin-6 re 99.2 4.1E-09 1.4E-13 76.4 17.5 153 28-197 8-186 (303)
496 1xau_A B- and T-lymphocyte att 99.2 1.2E-10 4E-15 69.0 7.5 81 127-207 23-117 (122)
497 1neu_A Myelin P0 protein; stru 99.2 1E-10 3.4E-15 73.4 7.8 90 30-119 5-121 (124)
498 4ffy_L DENV1-E111 single chain 99.2 1.2E-10 4.3E-15 73.2 8.2 91 26-117 3-112 (126)
499 1lp9_E T-cell receptor alpha c 99.2 9.4E-11 3.2E-15 79.4 8.1 118 27-150 4-148 (194)
500 2ghw_B Anti-SARS SCFV antibody 99.2 1.2E-10 4.2E-15 81.8 9.0 91 25-116 136-241 (247)
No 1
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.98 E-value=7.1e-31 Score=178.94 Aligned_cols=183 Identities=28% Similarity=0.479 Sum_probs=150.7
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..++... ++..|.|.+++.+|+|.|+|.+.+.
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~-~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 84 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAV-ESYPQPEISWTRNKILIKLF-DTRYSIRENGQLLTILSVEDSDDGIYCCTANNG 84 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCE-EEESCCEEEEEETTEECCTT-CTTEEEEGGGTEEEESSCCGGGCEEEEEEEECS
T ss_pred CceeecCccceeeeCCCcEEEEeeC-CCCCCCeEEEEECCEEcccc-CccEEEcCCccEEEEcCCCcccCeEEEEEEEcC
Confidence 4667777778889999999999988 67788899999999887432 3344443 3457999999999999999999988
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecCCeEEEecCCCCC
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPSRSLQLSDVRLED 181 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d 181 (216)
.+........+.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... +......+.|.|.++..+|
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 164 (192)
T 2iep_A 85 VGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKED 164 (192)
T ss_dssp SSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGG
T ss_pred CCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhh
Confidence 776545567888888898888888888999999999999999999999999999887644 3444566789999999999
Q ss_pred CeEEEEEEEcCCcce-EEEEEEEEEecc
Q psy573 182 GGEYVCEAENAVGKI-SASATLTVQSKY 208 (216)
Q Consensus 182 ~g~y~C~~~n~~~~~-~~~~~l~v~~~p 208 (216)
+|.|+|.+.|..|.. +..+.|.|..+|
T Consensus 165 ~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 165 AGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 999999999999986 556888887765
No 2
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.98 E-value=5.8e-30 Score=177.20 Aligned_cols=184 Identities=30% Similarity=0.543 Sum_probs=149.8
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE--ecC--cEEEEcccCC-CCCceEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL--VDG--TNLAIQDSRK-TDDGRYQC 97 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~--~~l~i~~~~~-~d~g~y~C 97 (216)
.+|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ...++.. ..+ ..|.|.++.. +|+|.|+|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAA-RGDPPPSIVWRKNGKKVSG-TQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCT-TSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEE-ccCCCCeEEEEECCEECCC-CcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 46888899999999999999999998 6788889999999998852 2233332 223 4799999999 99999999
Q ss_pred EEEcCCCCcccceeEEEEeec-------ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC
Q psy573 98 VVKNVAGTRESTDAVLRVLVK-------PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS 169 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~ 169 (216)
.+.+..+......+.|.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .......
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 162 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKD 162 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEET
T ss_pred EEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccC
Confidence 999987764466678888765 67777777788899999999999999999999999999887642 2223456
Q ss_pred CeEEEecCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecc
Q psy573 170 RSLQLSDVRLEDGGEYVCEAENAVGKISAS-ATLTVQSKY 208 (216)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~-~~l~v~~~p 208 (216)
+.|.|.++..+|.|.|+|.+.|..|..... +.|.|...+
T Consensus 163 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 163 GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 789999999999999999999999997654 788888654
No 3
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.97 E-value=9.2e-30 Score=173.94 Aligned_cols=177 Identities=25% Similarity=0.418 Sum_probs=146.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCC-CCCCCeeEEeeCCEEeccccCceEEE--ec--------CcEEEEcccCCCCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPR-GHPEPTLVWKKNGHPIDFENSKRLRL--VD--------GTNLAIQDSRKTDD 92 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~--~~--------~~~l~i~~~~~~d~ 92 (216)
+|.|...|....+.+|+.+.|.|.+ . +.|.+.+.|++++..+......+... .. .+.|.|.+++.+|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~-~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQL-QVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEE-EEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccChhheEEecCCcEEEeccc-ccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 5778888999999999999999998 5 77888999999999885432222222 22 25799999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCc-EEEEeeCCccCCCCCeeeecCCe
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL-TVHWKRLGSAMPEDRMSVLPSRS 171 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~ 171 (216)
|.|+|.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+...... .....
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-~~~~~ 159 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-GPQRS 159 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-SCCEE
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-CCCCe
Confidence 99999999977655455688999999988888888889999999999999999999 99999999887644322 34567
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy573 172 LQLSDVRLEDGGEYVCEAENAVGKIS-ASATLTV 204 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~n~~~~~~-~~~~l~v 204 (216)
|.|.++. |+|.|+|.+.|..|... ..+.|.|
T Consensus 160 L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 160 LHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999887 78999999999999875 7888887
No 4
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.97 E-value=8.8e-30 Score=173.04 Aligned_cols=182 Identities=26% Similarity=0.445 Sum_probs=144.6
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.|...+.+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....++.|.|.+++.+|+|.|+|.+.+..
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEE-ECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEE-cCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 4677778888999999999999998 677888999999998886556667777777889999999999999999999876
Q ss_pred CCc-ccceeEEEEeecceEEeCCC--ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCe-eee-cCCeEEEecCC
Q psy573 104 GTR-ESTDAVLRVLVKPYIIRGPK--DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRM-SVL-PSRSLQLSDVR 178 (216)
Q Consensus 104 ~~~-~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~~-~~~~l~i~~~~ 178 (216)
+.. ....+.+.+..+|.+...+. ...+..|+.+.|.|.+.+.|.+.+.|++++..+..... ... ....|.|.++.
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 160 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 160 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCC
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCC
Confidence 432 23456677777777765544 34666899999999999899999999999988765432 222 35679999999
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 179 LEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 179 ~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
.+|+|.|+|.+.|..|....++.|.|..
T Consensus 161 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 161 NSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999999999999999988888887753
No 5
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.97 E-value=3.2e-29 Score=169.42 Aligned_cols=176 Identities=24% Similarity=0.387 Sum_probs=140.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec---CcEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~ 100 (216)
++.|...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+............ .+.|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSV-EGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEE-ESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEE-eCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 3566777888899999999999998 67788899999999987543222222222 2579999999999999999999
Q ss_pred cCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCc-EEEEeeCCccCCCCCeeeecCCeEEEecCCC
Q psy573 101 NVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL-TVHWKRLGSAMPEDRMSVLPSRSLQLSDVRL 179 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (216)
+..+...+..+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.|.++
T Consensus 81 ~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~---~~~~L~i~~~-- 155 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP---SPSVLNVTGV-- 155 (182)
T ss_dssp SCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE---SSEEEEECCC--
T ss_pred cCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC---CceEEEEecc--
Confidence 876655566788999999998888888889999999999999999999 9999999987754322 5567888887
Q ss_pred CCCeEEEEEEEcCCcceE-EEEEEEEE
Q psy573 180 EDGGEYVCEAENAVGKIS-ASATLTVQ 205 (216)
Q Consensus 180 ~d~g~y~C~~~n~~~~~~-~~~~l~v~ 205 (216)
+|+|.|+|.+.|..|... .++.|.|+
T Consensus 156 ~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 156 TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 589999999999999864 47777663
No 6
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.97 E-value=1.5e-29 Score=172.68 Aligned_cols=181 Identities=27% Similarity=0.415 Sum_probs=145.5
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecccc--CceEEEec-CcEEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFEN--SKRLRLVD-GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~--~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+.... ..+..... ...|.|.+++.+|+|.|+|.+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHI-SGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEE-EecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 46788888889999999999999998 677888999999998875433 22222222 347999999999999999999
Q ss_pred EcCCCCcccceeEEEEe---ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeE
Q psy573 100 KNVAGTRESTDAVLRVL---VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSL 172 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l 172 (216)
.+..+.. .....+.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... +...... ..|
T Consensus 83 ~n~~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (194)
T 2a38_A 83 TNGSGQA-TSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSL 161 (194)
T ss_dssp EETTEEE-EEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEE
T ss_pred EcCCceE-eEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEE
Confidence 9877654 345567776 5667777777788999999999999999999999999999887643 2322222 269
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.|.++..+|.|.|+|.+.|..|....++.|.|+
T Consensus 162 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 162 LIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 999999999999999999999998888888774
No 7
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.97 E-value=6.9e-29 Score=168.98 Aligned_cols=179 Identities=23% Similarity=0.442 Sum_probs=144.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCC-CCeeEEee-CCEEeccccCceEEEe----cCcEEEEcccCCCCCceEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHP-EPTLVWKK-NGHPIDFENSKRLRLV----DGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~-~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C 97 (216)
++.+...|....+.+|+.++|.|.+ .+.+ .+.+.|++ ++..+... ..++... ....|.|.+++.+|+|.|+|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~-~~~~~~~~v~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEE-CCCSCCCEEEEECTTSCEECCB-SSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEEC-CCCCCCceEEEEeCCCccccCC-CCeEEEEECCCCceEEEEccCCcccCEEEEE
Confidence 4567778888899999999999998 5544 78999999 88777432 2333332 34589999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC---CCCeeeecCCeEEE
Q psy573 98 VVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP---EDRMSVLPSRSLQL 174 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i 174 (216)
.+.+..+......+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+. ..+.....++.|.|
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (191)
T 1epf_A 80 VVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (191)
T ss_dssp EEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEE
T ss_pred EEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEE
Confidence 999987544566778888888988888888889999999999999999999999999998764 23444556678999
Q ss_pred ecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 175 SDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 175 ~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
.++..+|.|.|+|.+.|..+.......+.|
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 999999999999999999876555555544
No 8
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.97 E-value=2.9e-29 Score=171.67 Aligned_cols=181 Identities=24% Similarity=0.375 Sum_probs=144.2
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE--ecCc--EEEEcccCCCCCceEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL--VDGT--NLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~--~l~i~~~~~~d~g~y~C~ 98 (216)
.+|.|...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... .++.. ..++ .|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKV-TGHPKPIVKWYRQGKEIIADG-LKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCCCS-SSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEE-eecCCCEEEEEECCEECccCC-CcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 36788888888999999999999998 677889999999999875322 22222 2333 899999999999999999
Q ss_pred EEcCCCCcccceeEEEEeecceEEeCC-----CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeee---cC
Q psy573 99 VKNVAGTRESTDAVLRVLVKPYIIRGP-----KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVL---PS 169 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~~~p~~~~~~-----~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~---~~ 169 (216)
+.+..+.. ...+.|.|..+|.+.... ....+..|+.+.|.|.+.+.|.+.+.|++++..+... +.... ..
T Consensus 81 ~~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~ 159 (197)
T 2j8h_A 81 ATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSF 159 (197)
T ss_dssp EEETTEEE-EEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSE
T ss_pred EEECCCce-eEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCc
Confidence 99876654 556778887777654332 3346788999999999999999999999999877543 22222 23
Q ss_pred CeEEEec-CCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 170 RSLQLSD-VRLEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 170 ~~l~i~~-~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
..|.|.+ +..+|.|.|+|.+.|..|..+.++.|.|.+
T Consensus 160 ~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 160 TSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 5789999 999999999999999999999998888763
No 9
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.97 E-value=4.9e-29 Score=169.47 Aligned_cols=175 Identities=19% Similarity=0.389 Sum_probs=139.5
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEee-CCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEEEc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKK-NGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.+...+....+.+|+.+.|.|.+ .+.|. .+.|++ ++..+.. ..++....+ ..|.|.+++.+|+|.|+|.+.+
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~-~~~p~-~v~W~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTA-IGEPE-SIDWYNPQGEKIIS--TQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEE-EECCS-EEEEECTTSCBCCC--CSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEecCCceEEecCCcEEEEEEe-ecCCe-eEEEEeCCCCccCC--CceEEEECCCCeEEEEEccCCcccCeEEEEEEEe
Confidence 45667778899999999999998 56666 999999 6666532 333333322 4899999999999999999999
Q ss_pred CCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC---CCCeeeecCCeEEEecCC
Q psy573 102 VAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP---EDRMSVLPSRSLQLSDVR 178 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~~~~ 178 (216)
..+......+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+. ..+.....++.|.|.++.
T Consensus 80 ~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 159 (189)
T 2v44_A 80 AKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNIN 159 (189)
T ss_dssp TTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCC
T ss_pred CCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcC
Confidence 87765566778888888888777777889999999999999999999999999988763 345555567789999999
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 179 LEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 179 ~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
.+|.|.|+|.+.|..+.......+.+
T Consensus 160 ~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 160 KSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999877554444433
No 10
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.97 E-value=3.4e-29 Score=173.34 Aligned_cols=186 Identities=27% Similarity=0.444 Sum_probs=143.0
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe--cCcEEEEccc-CCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV--DGTNLAIQDS-RKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~~~~l~i~~~-~~~d~g~y~C~~ 99 (216)
.+|.|...|.+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+........... .+..|.|.++ ..+|+|.|+|.+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQA-TGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEE-eeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 46888889999999999999999998 6778899999999998743221111111 2346999999 599999999999
Q ss_pred EcCCCCcccceeEEEEeec-------ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC----Ceeee-
Q psy573 100 KNVAGTRESTDAVLRVLVK-------PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED----RMSVL- 167 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~----~~~~~- 167 (216)
.+..+.. ...+.|.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... +....
T Consensus 84 ~n~~g~~-~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~ 162 (212)
T 2yd6_A 84 SNNVGEI-SVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLR 162 (212)
T ss_dssp EETTEEE-EEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEE
T ss_pred EcCCCcE-EEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEe
Confidence 9877653 45667777654 56666777778889999999999999999999999999877543 22222
Q ss_pred --cCCeEEEecCCCCCCeEEEEEEEcCCcce-EEEEEEEEEeccee
Q psy573 168 --PSRSLQLSDVRLEDGGEYVCEAENAVGKI-SASATLTVQSKYLK 210 (216)
Q Consensus 168 --~~~~l~i~~~~~~d~g~y~C~~~n~~~~~-~~~~~l~v~~~p~~ 210 (216)
....|.|.++..+|.|.|+|.|.|..|.. +..+.|.+...+.+
T Consensus 163 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~~ 208 (212)
T 2yd6_A 163 SESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKHH 208 (212)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred cCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecccc
Confidence 23679999999999999999999999984 45678888876654
No 11
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=1.3e-28 Score=177.56 Aligned_cols=191 Identities=24% Similarity=0.441 Sum_probs=151.9
Q ss_pred hhhceeeEEeeccceEecc-cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCC
Q psy573 13 EEKKKLKIEMLREEFRVQP-KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKT 90 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~-~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~ 90 (216)
+..+.|.|... |.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......+..... ...|.|.+++.+
T Consensus 88 ~~~~~l~V~~~-p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 165 (284)
T 2rik_A 88 SCSAQLGVQEP-PRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVE 165 (284)
T ss_dssp EEEEEEEEECC-CEEEECCCSEEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGG
T ss_pred EEEEEEEccCC-CcccccCCCceEecCCceEEEEEEE-eeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcc
Confidence 34566666554 4444443 34678999999999998 67788999999999988544333333332 357999999999
Q ss_pred CCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeeec-
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVLP- 168 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~~- 168 (216)
|+|.|+|.+.+..+.. ...+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .....
T Consensus 166 d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~ 244 (284)
T 2rik_A 166 DSGDYTCEAHNAAGSA-SSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSE 244 (284)
T ss_dssp GCEEEEEEEECSSCEE-EEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEE
T ss_pred cCEEEEEEEEcCCCce-eEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEc
Confidence 9999999999987764 55678889888888777777889999999999999999999999999998876432 22222
Q ss_pred --CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 169 --SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 169 --~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
...|.|.++..+|.|.|+|.+.|..|....++.|.|++
T Consensus 245 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 245 NFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284 (284)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEcC
Confidence 14799999999999999999999999999999888763
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=4.7e-28 Score=174.59 Aligned_cols=188 Identities=27% Similarity=0.484 Sum_probs=153.3
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEc
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.||.+...|.+..+.+|+.++|.|.+ .+.|.+.+.|++++..+......+..... ...|.|.+++.+|+|.|+|.+.+
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHV-TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEccccceEecCCCcEEEEEEE-EcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 36788888999999999999999998 67788899999999988544333333333 36899999999999999999998
Q ss_pred CCCCcccceeEEEEeecceEEeCCC-ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCe-eee---cCCeEEEec
Q psy573 102 VAGTRESTDAVLRVLVKPYIIRGPK-DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRM-SVL---PSRSLQLSD 176 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~~---~~~~l~i~~ 176 (216)
..+.. ...+.|.|..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+..... ... ....|.|.+
T Consensus 83 ~~g~~-~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (284)
T 2rik_A 83 VAGKD-SCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN 161 (284)
T ss_dssp TTEEE-EEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECS
T ss_pred CCceE-EEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECC
Confidence 77654 5567888888887765544 44688999999999999999999999999988764432 211 235699999
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 177 VRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 177 ~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
+..+|+|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 162 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 197 (284)
T 2rik_A 162 LSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRK 197 (284)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCS
T ss_pred CCcccCEEEEEEEEcCCCceeEEEEEEEecCCccee
Confidence 999999999999999999999999999998876543
No 13
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.97 E-value=1e-28 Score=168.77 Aligned_cols=180 Identities=19% Similarity=0.373 Sum_probs=144.4
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc---EEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT---NLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .++....+. .|.|.+++.+|+|.|+|.+
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQI-VGRPLPDIKWYRFGKELIQS--RKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEE-EEESCCEEEEEETTEEECCC--SSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCcccccCCceEEeCCCcEEEEEEE-ecCCCCEEEEEECCEECCCC--ccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 46788888889999999999999998 67788899999999988433 333333332 7999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecceEEeC---CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeeecC---CeE
Q psy573 100 KNVAGTRESTDAVLRVLVKPYIIRG---PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVLPS---RSL 172 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~~~---~~l 172 (216)
.+..+.. .....+.|..+|.+... +....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...... ..|
T Consensus 83 ~n~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (197)
T 3lcy_A 83 TNEVGEV-ETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHL 161 (197)
T ss_dssp ECSSCEE-EEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEE
T ss_pred ECCCCce-eEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEE
Confidence 9877654 44567777777765432 234467889999999999999999999999998876543 333222 579
Q ss_pred EEecCCC-CCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 173 QLSDVRL-EDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 173 ~i~~~~~-~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
.|.++.. +|.|.|+|.+.|..|.....+.|.|.+
T Consensus 162 ~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 162 VMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9999985 899999999999999999999988875
No 14
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=5.8e-29 Score=179.90 Aligned_cols=192 Identities=27% Similarity=0.461 Sum_probs=153.0
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|.. +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....++.|.|.++..+|+
T Consensus 90 ~~~~~l~v~~-~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 167 (291)
T 1qz1_A 90 EATVNVKIFQ-KLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDE 167 (291)
T ss_dssp EEEEEEEEEC-CSEEEECCSSEEEETTSCEEECCEE-ECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGC
T ss_pred EEEEEEEeec-cccccCCCCcccccCCCeEEEEEEe-ccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccC
Confidence 3344555443 4677777888889999999999998 6778889999999988755555566666778899999999999
Q ss_pred ceEEEEEEcCCC-CcccceeEEEEeecceEEeCCC--ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-----Ce
Q psy573 93 GRYQCVVKNVAG-TRESTDAVLRVLVKPYIIRGPK--DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-----RM 164 (216)
Q Consensus 93 g~y~C~~~~~~~-~~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-----~~ 164 (216)
|.|+|.+.+..+ ......+.+.+..+|.+..... ...+..|+.+.|.|.+.+.|.|.+.|++++..+... +.
T Consensus 168 G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~ 247 (291)
T 1qz1_A 168 GTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKH 247 (291)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSE
T ss_pred eEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcce
Confidence 999999998653 3234456777778887765543 346778999999999999999999999999887644 22
Q ss_pred eee-cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 165 SVL-PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 165 ~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
... ....|.|.++..+|+|.|+|.+.|..|.....+.|.|.+
T Consensus 248 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 248 IFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 222 345799999999999999999999999999999998875
No 15
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=5.4e-29 Score=180.06 Aligned_cols=194 Identities=25% Similarity=0.421 Sum_probs=147.8
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..+.|.|.. ++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....++.|.|.++..+|+|
T Consensus 89 ~~~~l~v~~-~~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 166 (291)
T 2wim_A 89 ATVVLEIYQ-KLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEG 166 (291)
T ss_dssp EEEEEEEEC-CCBCCSCCCSEEEETTSCEEECCCC-BCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCE
T ss_pred EEEEEEecC-CcceEeCCCChhhcCCCCEEEEEEE-ccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCE
Confidence 344555544 3566666777889999999999998 67788899999999887655566677777788999999999999
Q ss_pred eEEEEEEcCCCC-cccceeEEEEeecceEEeCCC--ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee-c
Q psy573 94 RYQCVVKNVAGT-RESTDAVLRVLVKPYIIRGPK--DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL-P 168 (216)
Q Consensus 94 ~y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~-~ 168 (216)
.|+|.+.+..+. .....+.+.+..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .... .
T Consensus 167 ~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~ 246 (291)
T 2wim_A 167 IYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS 246 (291)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECST
T ss_pred EEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCC
Confidence 999999987643 223456677777776655443 3366789999999999999999999999998876543 2222 3
Q ss_pred CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 169 SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
...|.|.++..+|+|.|+|.+.|..|....++.|.|..++.
T Consensus 247 ~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 247 NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp TCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred ccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 46799999999999999999999999999999999887653
No 16
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=8.7e-29 Score=180.20 Aligned_cols=197 Identities=28% Similarity=0.447 Sum_probs=146.7
Q ss_pred hhhceeeEEeec------cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccc-cCceEEEecCcEEEEc
Q psy573 13 EEKKKLKIEMLR------EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFE-NSKRLRLVDGTNLAIQ 85 (216)
Q Consensus 13 ~~~~~l~v~~~~------~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~l~i~ 85 (216)
+..+.|.|...+ |.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ...+.....++.|.|.
T Consensus 91 ~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~ 169 (304)
T 2yd9_A 91 TVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIE 169 (304)
T ss_dssp CCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEE-ECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEEC
T ss_pred EEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEEC-ccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEc
Confidence 445666665542 566777778889999999999998 78888999999999987543 2334555667789999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEe---ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVL---VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED 162 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~ 162 (216)
+++.+|+|.|+|.+.+..+........+.|. .+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+...
T Consensus 170 ~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~ 249 (304)
T 2yd9_A 170 SSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPE 249 (304)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCS
T ss_pred cCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCc
Confidence 9999999999999999877554333455553 5677777777778899999999999999999999999999887654
Q ss_pred CeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 163 RMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 163 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
.........|.+.++ +|+|.|+|.|.|..|....++.|.|.+++.+..
T Consensus 250 ~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~~ 297 (304)
T 2yd9_A 250 DDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKAGT 297 (304)
T ss_dssp SSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC---------
T ss_pred ccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCccccc
Confidence 322222234555554 699999999999999999999999998876554
No 17
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.7e-28 Score=169.54 Aligned_cols=173 Identities=23% Similarity=0.320 Sum_probs=143.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
.+.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .+..|.|.+++.+|+|.|+|.+.+..
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~~n~~ 88 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRA-TGHPFVQYQWFKMNKEIPNG--------NTSELIFNAVHVKDAGFYVCRVNNNF 88 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEE-TTTTSSEEEEEETTEECTTC--------CSSEEEETTCCGGGCEEEEEEEECTT
T ss_pred CCEEEECCCCeEEeCCCcEEEEeee-cCCCCCEEEEEECCEECCCC--------CCCEEEEccCChhhCeEeEEEEEcCC
Confidence 5678888999999999999999998 77888899999999887432 24689999999999999999999887
Q ss_pred CCcccceeEEEEeec---------------ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeec
Q psy573 104 GTRESTDAVLRVLVK---------------PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLP 168 (216)
Q Consensus 104 ~~~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 168 (216)
+...+..+.|.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .
T Consensus 89 ~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~-----~ 163 (218)
T 3k0w_A 89 TFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----T 163 (218)
T ss_dssp CCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-----C
T ss_pred CCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-----C
Confidence 655455677777655 56777777788999999999999999999999999999877643 3
Q ss_pred CCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEeccee
Q psy573 169 SRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTVQSKYLK 210 (216)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~~~p~~ 210 (216)
...|.|.++..+|.|.|+|.+.|..|. .+..+.|.|.+.+.+
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~~ 206 (218)
T 3k0w_A 164 KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 206 (218)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC----
T ss_pred CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCccC
Confidence 467999999999999999999998887 666788888765433
No 18
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.97 E-value=5.3e-29 Score=172.15 Aligned_cols=195 Identities=29% Similarity=0.493 Sum_probs=144.6
Q ss_pred eeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccC---ceEEEecCcEE-----EEcccCC
Q psy573 18 LKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENS---KRLRLVDGTNL-----AIQDSRK 89 (216)
Q Consensus 18 l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~---~~~~~~~~~~l-----~i~~~~~ 89 (216)
|.+...+|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... .......++.+ .|.+++.
T Consensus 3 l~~~~~pp~i~~~p~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 81 (212)
T 2v9r_A 3 LRQEDFPPRIVEHPSDLIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSR 81 (212)
T ss_dssp ---CCEEEEEEECCCCEEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCC
T ss_pred cCcccCCcceecCCCceEEeCCCcEEEEEEc-CCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCc
Confidence 5566678899999999999999999999998 6778889999999988743221 12223333333 4456689
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec-ceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCC-Ceee
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK-PYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPED-RMSV 166 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~-~~~~ 166 (216)
+|+|.|+|.+.+..+......+.+.|... +.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+... ....
T Consensus 82 ~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~ 161 (212)
T 2v9r_A 82 PDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT 161 (212)
T ss_dssp CSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEE
T ss_pred ccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEE
Confidence 99999999999877654455667777653 344455666788999999999998 88899999999999887643 2233
Q ss_pred ecCCeEEEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecceeeec
Q psy573 167 LPSRSLQLSDVRLEDGGEYVCEAENAVGKISA-SATLTVQSKYLKVIH 213 (216)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~-~~~l~v~~~p~~~~~ 213 (216)
..++.|.|.++..+|.|.|+|.+.|..|.... .+.|.|..+|.+...
T Consensus 162 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~ 209 (212)
T 2v9r_A 162 IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKA 209 (212)
T ss_dssp EETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-------
T ss_pred ccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhh
Confidence 45678999999999999999999999998554 489999998876643
No 19
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.97 E-value=4.3e-28 Score=165.02 Aligned_cols=173 Identities=22% Similarity=0.384 Sum_probs=137.7
Q ss_pred cceEecccceEEec-CCcEEEEeeCCCCCCC--CeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEc
Q psy573 25 EEFRVQPKSQRVAA-GDTALLECGPPRGHPE--PTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 25 ~~~~~~~~~~~~~~-G~~~~l~C~~~~~~~~--~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
|.+.. +....+.+ |+.+.|.|.+ .+.+. +.+.|++++..+...... ..+..|.|.+++.+|+|.|+|.+.+
T Consensus 4 P~i~~-~~~~~v~~~G~~v~l~C~~-~~~~~~~~~v~W~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~n 77 (190)
T 2wv3_A 4 PRIVT-SEEVIIRDSLLPVTLQCNL-TSSSHTLMYSYWTKNGVELTATRKN----ASNMEYRINKPRAEDSGEYHCVYHF 77 (190)
T ss_dssp CEEEE-CCCEECCCSSSCEEEEEEE-EECSSCEEEEEEEETTEECTTCCBC----CSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred Ccccc-cceEEEccCCceEEEEEEe-ccCCCCceEEEEEECCEECcccceE----eccEEEEEecCCcccCEEEEEEEEe
Confidence 44444 44566667 9999999998 55565 789999999987432211 1446899999999999999999998
Q ss_pred CCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEee--CCccC----CCCCeeeecC---CeE
Q psy573 102 VAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKR--LGSAM----PEDRMSVLPS---RSL 172 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~--~~~~~----~~~~~~~~~~---~~l 172 (216)
. +. ....+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+ ...+...... ..|
T Consensus 78 ~-~~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L 155 (190)
T 2wv3_A 78 V-SA-PKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTEL 155 (190)
T ss_dssp T-TE-EEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEE
T ss_pred C-Cc-ccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEE
Confidence 7 44 356788899999988877777889999999999999999999999999 56544 2233333322 369
Q ss_pred EEecCC-CCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 173 QLSDVR-LEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 173 ~i~~~~-~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.|.++. .+|.|.|+|.+.|..|....++.|.|.
T Consensus 156 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 156 NIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999 799999999999999999999888876
No 20
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.96 E-value=1.7e-28 Score=185.07 Aligned_cols=193 Identities=31% Similarity=0.510 Sum_probs=158.9
Q ss_pred hhhceeeEEeec-----cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEccc
Q psy573 13 EEKKKLKIEMLR-----EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDS 87 (216)
Q Consensus 13 ~~~~~l~v~~~~-----~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 87 (216)
+..+.+.|...+ +.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. .........++.|.|.++
T Consensus 205 ~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~L~i~~~ 282 (403)
T 3laf_A 205 GNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV-SGYPPPSFTWLRGEEVIQL-RSKKYSLLGGSNLLISNV 282 (403)
T ss_dssp CCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEECCC-SSSSEEEETTTEEEECSC
T ss_pred ccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEc-CCCCCCeEEEEECCeeccC-CCceEEECCccEEEEeCC
Confidence 344566665432 234456667889999999999998 6778889999999988743 233455566788999999
Q ss_pred CCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceee
Q psy573 88 RKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSV 166 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~ 166 (216)
..+|+|.|+|.+.+..+.. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....
T Consensus 283 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~ 361 (403)
T 3laf_A 283 TDDDSGTYTCVVTYKNENI-SASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQI 361 (403)
T ss_dssp CGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEE
T ss_pred CHHHCEEEEEEEEcCCCce-EEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEE
Confidence 9999999999999887654 5677888999998888888888999999999999999999999999999887543 4444
Q ss_pred ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 167 LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
...+.|.|.++..+|.|.|+|.|.|..|....++.|.|.++|
T Consensus 362 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 362 VGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp ETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred ecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 567889999999999999999999999999999999988765
No 21
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.96 E-value=1.2e-28 Score=171.01 Aligned_cols=186 Identities=30% Similarity=0.515 Sum_probs=143.0
Q ss_pred eeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecccc--CceEEEecCcEE----EEcccCCCC
Q psy573 18 LKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFEN--SKRLRLVDGTNL----AIQDSRKTD 91 (216)
Q Consensus 18 l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~--~~~~~~~~~~~l----~i~~~~~~d 91 (216)
+.....+|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ..+.. ..++.+ .|.+++.+|
T Consensus 3 ~~~~~~~P~i~~~p~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~-~~~~~~~~~l~i~~v~~~d 80 (217)
T 2vr9_A 3 LAGQYQSPRIIEHPTDLVVKKNEPATLNCKV-EGKPEPTIEWFKDGEPVSTNEKKSHRVQ-FKDGALFFYRTMQGKKEQD 80 (217)
T ss_dssp ---CCCCCEEEECCCCEEECTTSCEEECCEE-ECSSCCEEEEEETTEECCCSSSSSSEEE-CTTSCEEESSCCBSSSCBC
T ss_pred cccccCCCEEecCCCceEEeCCCcEEEEEEc-CCCCCCeEEEEECCcCccCCCccceeEE-ecCCceEEEEEeccCCccc
Confidence 3445567889999999999999999999998 677888999999999875432 22222 223333 678899999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEee-cceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCC--------
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLV-KPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPE-------- 161 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~-------- 161 (216)
+|.|+|.+.+..+........+.|.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 81 ~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~ 160 (217)
T 2vr9_A 81 GGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGA 160 (217)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---C
T ss_pred CceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCccccccccc
Confidence 99999999987765544456677665 4455556667788999999999999 8889999999999987652
Q ss_pred -CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 162 -DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 162 -~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.+......+.|.|.++..+|.|.|+|.+.|..|....+..+.+.
T Consensus 161 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 161 SSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp CCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 23344456789999999999999999999999987666544443
No 22
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=4e-28 Score=190.73 Aligned_cols=197 Identities=23% Similarity=0.420 Sum_probs=157.8
Q ss_pred hhceeeEEeeccceEeccc-ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCC
Q psy573 14 EKKKLKIEMLREEFRVQPK-SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTD 91 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~-~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d 91 (216)
..+.|.|.. +|.+...+. ...+.+|+.+.|.|.+ .+.|.+.+.|++++..+......+..... ...|.|.+++.+|
T Consensus 281 ~~~~l~V~~-~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D 358 (570)
T 3b43_A 281 CSAQLGVQE-PPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVED 358 (570)
T ss_dssp EEEEECCBC-CCEEEECCCSBCCEESSCEEEEEEEE-ESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGG
T ss_pred EEEEEEeec-CCcccccCCCccEEcCCCcEEEEEEE-eeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCccc
Confidence 345555544 355554433 3568899999999998 78899999999999988544333333332 3579999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeeec-C
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLP-S 169 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~-~ 169 (216)
+|.|+|.+.|..|.. .....|.|..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... +..... +
T Consensus 359 ~G~Y~C~a~N~~g~~-~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~ 437 (570)
T 3b43_A 359 SGDYTCEAHNAAGSA-SSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSEN 437 (570)
T ss_dssp CEEEEEEEEBTTBCC-EEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEET
T ss_pred CEEEEEEEEeCCCEE-EEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcC
Confidence 999999999988865 4567888999998888888888899999999999999999999999999887643 333322 2
Q ss_pred --CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeeec
Q psy573 170 --RSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVIH 213 (216)
Q Consensus 170 --~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~~ 213 (216)
..|.|.++..+|.|.|+|.|.|..|.....+.|.|..+|.+...
T Consensus 438 ~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~ 483 (570)
T 3b43_A 438 FLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKK 483 (570)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEEC
T ss_pred CEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCccccc
Confidence 46999999999999999999999999999999999998877653
No 23
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.96 E-value=7.2e-28 Score=165.06 Aligned_cols=177 Identities=28% Similarity=0.435 Sum_probs=138.5
Q ss_pred cccceEEecCCcEEEEeeCCCCCCC-CeeEEeeCCEEeccccCceE-EEecCcEEEEcccCCCCCceEEEEEEcCCCCcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPE-PTLVWKKNGHPIDFENSKRL-RLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRE 107 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~-~~~~W~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 107 (216)
.+..+.+.+|+.+.|.|.+..+.|. +.+.|++++..+......+. ....++.|.|.+++.+|+|.|+|.+.+..+...
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 4467889999999999993267777 89999999877643333333 333567899999999999999999998654332
Q ss_pred c--ceeEEEEe-------ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCC
Q psy573 108 S--TDAVLRVL-------VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVR 178 (216)
Q Consensus 108 ~--~~~~l~v~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 178 (216)
. ....+.+. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+............|.|.++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~ 173 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQ 173 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCC
T ss_pred hhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCC
Confidence 2 22333332 34555555557788999999999999999999999999999877654444566789999999
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 179 LEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 179 ~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
.+|.|.|+|.+.|..|....++.|.|++
T Consensus 174 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 174 LEDEGIYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hhhCEEEEEEEEecCCceeeeEEEEEeC
Confidence 9999999999999999999999888863
No 24
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.96 E-value=3.4e-28 Score=182.56 Aligned_cols=172 Identities=29% Similarity=0.500 Sum_probs=143.0
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC-EEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCccc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG-HPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRES 108 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 108 (216)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++++ ..+.. .......++.|.|.+++.+|+|.|+|.+.|..|.. .
T Consensus 211 ~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~~~~~~~~---~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~-~ 285 (384)
T 3kld_A 211 FPETVPAEKGTTVKLECFA-LGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYECVAENSRGKN-V 285 (384)
T ss_dssp CCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTCCCCCT---TCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred CCCceEecCCCcEEEEEEE-eecCCCcEEEEeCCCccccc---cceecCCCcEEEECCCChhhCEEEEEEEEcCCCeE-E
Confidence 3556788999999999998 78899999999954 34321 11222345689999999999999999999988765 4
Q ss_pred ceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEE
Q psy573 109 TDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCE 188 (216)
Q Consensus 109 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 188 (216)
....|.|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+..........+.|.|.++..+|+|.|+|.
T Consensus 286 ~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 365 (384)
T 3kld_A 286 AKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 365 (384)
T ss_dssp EEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEE
T ss_pred EEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEE
Confidence 45688888889888888888999999999999999999999999999998865443344567899999999999999999
Q ss_pred EEcCCcceEEEEEEEEEe
Q psy573 189 AENAVGKISASATLTVQS 206 (216)
Q Consensus 189 ~~n~~~~~~~~~~l~v~~ 206 (216)
|.|..|....++.|.|.+
T Consensus 366 A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 366 AENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EEETTEEEEEEEEEEEC-
T ss_pred EEeCCceEEeceEEEEec
Confidence 999999999999998864
No 25
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.96 E-value=7.4e-28 Score=165.85 Aligned_cols=176 Identities=11% Similarity=0.154 Sum_probs=129.9
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-Cc--EEEEcccCCCCCceEEEEEEc
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GT--NLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~--~l~i~~~~~~d~g~y~C~~~~ 101 (216)
|.|.. +....+.+|+.+.|.|.+..+.|.+.+.|++++..+......+..... ++ +|.|.+++.+|+|.|+|.+.|
T Consensus 4 p~~~~-~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCE-EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred Ceeec-CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 44433 346789999999999998556799999999999999654444444332 12 699999999999999999998
Q ss_pred CCCCcccceeEEEEe---------------------ecceEEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCccC
Q psy573 102 VAGTRESTDAVLRVL---------------------VKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSAM 159 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~ 159 (216)
+... ....+.+. .+|.+.... ...+.+|+.+.|.|.+.+. |.|.+.|+|++..+
T Consensus 83 --g~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 83 --GKAT-NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp --TTEE-EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred --CCeE-EEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 3221 12222110 145544333 3678899999999999998 99999999999887
Q ss_pred CCCCeeeec--CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 160 PEDRMSVLP--SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 160 ~~~~~~~~~--~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
......... ..+|.|.++..+|+|.|+|.+.|..|....++.|...
T Consensus 159 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 159 SVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 543222212 2369999999999999999999999999988887653
No 26
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=3.7e-27 Score=170.40 Aligned_cols=186 Identities=22% Similarity=0.400 Sum_probs=148.5
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCC-CCeeEEee-CCEEeccccCceEEEe----cCcEEEEcccCCCCCceEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHP-EPTLVWKK-NGHPIDFENSKRLRLV----DGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~-~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C 97 (216)
++.+.+.|....+.+|+.+.|.|.+ .+.+ .+.+.|++ ++..+... ..++... ....|.|.+++.+|+|.|+|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~-~~~~~~~~i~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEE-SSCCSCCEEEEECTTSCBCCSS-CSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEe-CCCCCCcEeEEECCCCeECccC-CceEEEEEcCCCeEEEEEecCCCCCCEEEEE
Confidence 5678888888999999999999998 5544 68999999 77666422 2233322 24589999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC---CCeeeecCCeEEE
Q psy573 98 VVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE---DRMSVLPSRSLQL 174 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~---~~~~~~~~~~l~i 174 (216)
.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+.....++.|.|
T Consensus 80 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (291)
T 1qz1_A 80 VVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (291)
T ss_dssp EEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEE
T ss_pred EEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEE
Confidence 9999876555667788888888888888888999999999999999999999999999987643 2344456678999
Q ss_pred ecCCCCCCeEEEEEEEcCCcc--eEEEEEEEEEecceee
Q psy573 175 SDVRLEDGGEYVCEAENAVGK--ISASATLTVQSKYLKV 211 (216)
Q Consensus 175 ~~~~~~d~g~y~C~~~n~~~~--~~~~~~l~v~~~p~~~ 211 (216)
.++..+|+|.|+|.+.|..+. ....+.|.|..+|.+.
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~ 198 (291)
T 1qz1_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQ 198 (291)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEE
T ss_pred ccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCccc
Confidence 999999999999999987643 4456677777776554
No 27
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.96 E-value=1.1e-28 Score=169.34 Aligned_cols=165 Identities=15% Similarity=0.140 Sum_probs=122.1
Q ss_pred ceEEecCCcEEEEeeCC--CCCCCCeeEEeeCCEEec---------------cccCceEEE---ecCcEEEEcccCCCCC
Q psy573 33 SQRVAAGDTALLECGPP--RGHPEPTLVWKKNGHPID---------------FENSKRLRL---VDGTNLAIQDSRKTDD 92 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~--~~~~~~~~~W~~~~~~~~---------------~~~~~~~~~---~~~~~l~i~~~~~~d~ 92 (216)
++++..|+.++|.|.+. .+.|.+.+.|+|++.... .....++.. .+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 56889999999999531 567889999999763211 011111211 1234799999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC-----CCCeeee
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP-----EDRMSVL 167 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~-----~~~~~~~ 167 (216)
|.|.|.+.|..+.. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+. ..+....
T Consensus 82 G~Y~C~a~n~~g~~-~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 82 GNYLCRMKLGETEV-TKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred eEEEEEEEcCCCcE-EEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 99999999977764 45678888888887777777788899999999999999999999998775543 2233444
Q ss_pred cCCeE---EEecCCCCCCeEEEEEEEcCCcceEE
Q psy573 168 PSRSL---QLSDVRLEDGGEYVCEAENAVGKISA 198 (216)
Q Consensus 168 ~~~~l---~i~~~~~~d~g~y~C~~~n~~~~~~~ 198 (216)
.+++| .+.++..+|.|.|+|.|.|..|....
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 55554 44689999999999999999998764
No 28
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.2e-27 Score=172.80 Aligned_cols=180 Identities=28% Similarity=0.446 Sum_probs=137.6
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE-ecC--cEEEEcccCC-CCCceEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL-VDG--TNLAIQDSRK-TDDGRYQCV 98 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~~--~~l~i~~~~~-~d~g~y~C~ 98 (216)
.+|.|...|.+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ...... ..+ ..|.|.++.. +|+|.|+|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~-~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQA-TGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEE-EEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 36888889999999999999999998 67888999999999887322 111111 222 5799999998 999999999
Q ss_pred EEcCCCCcccceeEEEEeec-------ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC----Ceeee
Q psy573 99 VKNVAGTRESTDAVLRVLVK-------PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED----RMSVL 167 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~----~~~~~ 167 (216)
+.+..+.. ...+.|.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... +....
T Consensus 83 a~n~~g~~-~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~ 161 (304)
T 2yd9_A 83 AQNSVGEI-TVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQL 161 (304)
T ss_dssp EECSSCEE-CCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEEC
T ss_pred EECCCCeE-EEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeC
Confidence 99987763 55678888765 66777777788999999999999999999999999999877532 33344
Q ss_pred cCCeEEEecCCCCCCeEEEEEEEcCCcceEEE-EEEEEE
Q psy573 168 PSRSLQLSDVRLEDGGEYVCEAENAVGKISAS-ATLTVQ 205 (216)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~-~~l~v~ 205 (216)
..+.|.|.++..+|.|.|+|.+.|..|..... ..|.|.
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~ 200 (304)
T 2yd9_A 162 RSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVR 200 (304)
T ss_dssp TTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEE
Confidence 56789999999999999999999998875422 444443
No 29
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=3.2e-27 Score=171.87 Aligned_cols=185 Identities=23% Similarity=0.347 Sum_probs=148.5
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE--ecCc--EEEEcccCCCCCceEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL--VDGT--NLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~--~l~i~~~~~~d~g~y~C~ 98 (216)
.+|.|...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+.... .++.. ..++ .|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKV-TGHPKPIVKWYRQGKEIIADG-LKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEE-ECSSCCEEEEEETTEECCCCS-SSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEE-eCCCCCeEEEEECCEEcccCC-CeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 36788888999999999999999998 778889999999999875332 22222 2333 899999999999999999
Q ss_pred EEcCCCCcccceeEEEEeecceEEeC-----CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeee---cC
Q psy573 99 VKNVAGTRESTDAVLRVLVKPYIIRG-----PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVL---PS 169 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~---~~ 169 (216)
+.+..+.. ...+.|.|..+|.+... +....+..|+.+.|.|.+.+.|.+.+.|++++..+... +.... ..
T Consensus 81 a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~ 159 (305)
T 2nzi_A 81 ATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSF 159 (305)
T ss_dssp EEETTEEE-EEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSE
T ss_pred EEcCCCCc-cceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCc
Confidence 99987654 55678888777765432 24567889999999999999999999999999877543 22222 23
Q ss_pred CeEEEec-CCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 170 RSLQLSD-VRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 170 ~~l~i~~-~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
..|.|.+ +..+|.|.|+|.+.|..|....++.|.|...|..
T Consensus 160 ~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~ 201 (305)
T 2nzi_A 160 TSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDP 201 (305)
T ss_dssp EEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCC
T ss_pred eEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCC
Confidence 5788998 9999999999999999999999999999876653
No 30
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.96 E-value=1.8e-27 Score=164.05 Aligned_cols=181 Identities=19% Similarity=0.232 Sum_probs=134.7
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEec-----------------cccCceEEEecCcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPID-----------------FENSKRLRLVDGTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~-----------------~~~~~~~~~~~~~~l~i~~~~~ 89 (216)
+.+.+.+..+.+|++++|.|.. .+.+.+.+.||+++.... ....++.....+++|.|.+++.
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~ 80 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHN-LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITM 80 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEEC-CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCG
T ss_pred ccccCccceeecCCcEEEEEeC-CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccc
Confidence 3455556789999999999996 677888999998743211 1124455566677899999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec---ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Cee
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK---PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMS 165 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~ 165 (216)
+|+|.|+|.+.+..+......+.|.|..+ |.+...... +..|+.+.|.|.+.+.| +.+.|++++..+... +..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~ 157 (208)
T 3r4d_A 81 KDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMT 157 (208)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEE
T ss_pred cCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeE
Confidence 99999999999875444455667777654 445444333 88899999999998866 799999999887643 333
Q ss_pred ee-cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEecceee
Q psy573 166 VL-PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTVQSKYLKV 211 (216)
Q Consensus 166 ~~-~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~~~p~~~ 211 (216)
.. .+..|.|.++..+|.|.|+|.+.|..|. .+..+.|.|..+|.+.
T Consensus 158 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~~ 205 (208)
T 3r4d_A 158 LSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHHH 205 (208)
T ss_dssp EETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC------
T ss_pred EcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCccc
Confidence 33 3478999999999999999999999998 5557888888877654
No 31
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.96 E-value=3e-27 Score=162.53 Aligned_cols=168 Identities=19% Similarity=0.312 Sum_probs=132.1
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
.|.+...|....+.+|+.++|.|.+ .+.+.+ .+.||+++..+... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~~v~W~k~g~~l~~~---------~~~L~i~~v~~~D~G~Y~C~a~n~ 76 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQG-AYSPEDQSTQWFHNESLISSQ---------ASSYFIDAATVDDSGEYRCQTQLS 76 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEEC-CSSSSCCCEEEEETTEEESCC---------SSEEEESSCCGGGCEEEEEEETTS
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcC-CCCCCCcEEEEEECCEEcccC---------ccEEEEecccccCCEEEEEEeCCC
Confidence 3566777777889999999999998 566655 49999999987322 268999999999999999999864
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCC
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLED 181 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (216)
. .+..+.|.|..+|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++++..+.. ......|.|.++..+|
T Consensus 77 ~---~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~----~~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 77 T---LSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY----FHHNSDFYIPKATLKD 148 (204)
T ss_dssp B---CCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGG
T ss_pred c---ccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec----ccCCceEEECcCCccc
Confidence 2 34567888888877666554 678899999999999655 5688999999987532 2245789999999999
Q ss_pred CeEEEEEEEcC-CcceEEEEEEEEEecce
Q psy573 182 GGEYVCEAENA-VGKISASATLTVQSKYL 209 (216)
Q Consensus 182 ~g~y~C~~~n~-~~~~~~~~~l~v~~~p~ 209 (216)
+|.|+|.+.|. .+..+..+.|.|.++|.
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 149 SGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred CEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 99999999994 44577788888887653
No 32
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.96 E-value=6.5e-28 Score=166.61 Aligned_cols=180 Identities=23% Similarity=0.391 Sum_probs=137.8
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEe----------ccccCceEEEecCcEEEEcccCCCCCce
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPI----------DFENSKRLRLVDGTNLAIQDSRKTDDGR 94 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 94 (216)
..+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+ ......++.... ..|.|.+++.+|+|.
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTY-SGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-SGITFSSVTRKDNGE 79 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEE-ESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-TEEEESCCCGGGCEE
T ss_pred ceEEecCCCeEEEcCCCEEEEeEe-CCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec-eeEEEcccCcccCeE
Confidence 345566777889999999999998 66688899999976542 122334444443 789999999999999
Q ss_pred EEEEEEcCCCC-cccceeEEEEeecceEEeCCCceeEeCCCcEEEEEE-eCCCCCcEEEEeeCCc-cCCCCCe-------
Q psy573 95 YQCVVKNVAGT-RESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECS-VGGDAVLTVHWKRLGS-AMPEDRM------- 164 (216)
Q Consensus 95 y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~i~W~~~~~-~~~~~~~------- 164 (216)
|+|.+.+..+. .....+.|.|..+|.+...+....+.+|+.+.|.|. +.+.|.+.+.|++++. .+.....
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~ 159 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMN 159 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSS
T ss_pred EEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccC
Confidence 99999987652 224567788888776554445567889999999999 7889999999999998 7654221
Q ss_pred ---ee-ecCCeEEEecCCCCCCeEEEEEEEcCCcce--EEEEEEEEEe
Q psy573 165 ---SV-LPSRSLQLSDVRLEDGGEYVCEAENAVGKI--SASATLTVQS 206 (216)
Q Consensus 165 ---~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~--~~~~~l~v~~ 206 (216)
.. .....|.|.++..+|.|.|+|.+.|..|.. +..+.|.|.+
T Consensus 160 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 160 SSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred ceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 11 235789999999999999999999999987 4556666653
No 33
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=167.54 Aligned_cols=181 Identities=29% Similarity=0.452 Sum_probs=134.0
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCc--eEEEecCcEEEEcccCCCCCceEEEEEEcCCCCccc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSK--RLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRES 108 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 108 (216)
+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+...... .........|.|.+++.+|+|.|+|.+.+..+.. .
T Consensus 22 ~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~-~ 99 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSI-R 99 (241)
T ss_dssp CCEEEEETTSEEEEECCE-ECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred CcceEEcCCCeEEEEEEe-cCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCce-E
Confidence 446789999999999998 67788899999999987533221 2223345689999999999999999999876654 4
Q ss_pred ceeEEEEeec----ceE-EeCCCceeEeCCCcEEEEEEeCCCCCcEEEEee----CCccCCCCCeee------------e
Q psy573 109 TDAVLRVLVK----PYI-IRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKR----LGSAMPEDRMSV------------L 167 (216)
Q Consensus 109 ~~~~l~v~~~----p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~~~~------------~ 167 (216)
..+.+.|... |.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+....... .
T Consensus 100 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (241)
T 3grw_A 100 QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVE 179 (241)
T ss_dssp EEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSE
T ss_pred EEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecC
Confidence 4566666542 233 334566678899999999999999999999999 776664332111 1
Q ss_pred cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeeec
Q psy573 168 PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVIH 213 (216)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~~ 213 (216)
....|.|.++..+|.|.|+|.+.|..|..+.++.|.|.++|.....
T Consensus 180 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~ 225 (241)
T 3grw_A 180 ADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEE 225 (241)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---------
T ss_pred CceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCcc
Confidence 2356999999999999999999999999999999999988766544
No 34
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=2.7e-27 Score=178.01 Aligned_cols=173 Identities=24% Similarity=0.384 Sum_probs=146.5
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe---cCcEEEEcccCCCCCceEEEEEEcCCCCc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV---DGTNLAIQDSRKTDDGRYQCVVKNVAGTR 106 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 106 (216)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......+.... .+..|.|.++..+|+|.|+|.+.+..+..
T Consensus 218 ~~~~~~~~~G~~v~l~C~~-~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 296 (395)
T 1bih_A 218 VSKDMMAKAGDVTMIYCMY-GSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKP 296 (395)
T ss_dssp ECCSEEEETTSCEEEEEEE-ECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSC
T ss_pred cCCceEEECCCcEEEEEEe-ccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCc
Confidence 3556789999999999998 7888899999999998854443433322 22379999999999999999999988776
Q ss_pred ccceeEEEEeecceEEeCCCc-eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEE
Q psy573 107 ESTDAVLRVLVKPYIIRGPKD-TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEY 185 (216)
Q Consensus 107 ~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 185 (216)
....+.|.|..+|.+...+.. ..+..|+.+.|.|.+.+.|.+.+.|++++..+...+.... .+.|.|.++..+|+|.|
T Consensus 297 ~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y 375 (395)
T 1bih_A 297 QKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVT-DSGLVIKGVKNGDKGYY 375 (395)
T ss_dssp EEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEE-TTEEEESSCCSTTCEEE
T ss_pred eEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEE-CCEEEEeeCCcccCEEE
Confidence 555788999999998887777 6889999999999999999999999999998876655543 45899999999999999
Q ss_pred EEEEEcCCcceEEEEEEEE
Q psy573 186 VCEAENAVGKISASATLTV 204 (216)
Q Consensus 186 ~C~~~n~~~~~~~~~~l~v 204 (216)
+|.|.|..|....++.|.|
T Consensus 376 ~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 376 GCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEccCCCceEEEEEEE
Confidence 9999999999988888876
No 35
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.96 E-value=4.3e-28 Score=167.69 Aligned_cols=177 Identities=25% Similarity=0.410 Sum_probs=133.3
Q ss_pred cccceEEecCCcEEEEeeCCCCCC----CCeeEEee----------------CCEEec---cccCceEEEec------Cc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP----EPTLVWKK----------------NGHPID---FENSKRLRLVD------GT 80 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~----~~~~~W~~----------------~~~~~~---~~~~~~~~~~~------~~ 80 (216)
.+..+.+.+|+.+.|.|.+ .+.+ .+.+.|++ ++..+. ....++..... +.
T Consensus 6 ~~~~v~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 84 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKF-TLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDA 84 (214)
T ss_dssp CEEEEEEETTSCEEECCBC-CCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBC
T ss_pred CCceEEEecCCCEEEEEEE-ecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcc
Confidence 4456789999999999998 4544 46999998 333331 12244555433 45
Q ss_pred EEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCcc-
Q psy573 81 NLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSA- 158 (216)
Q Consensus 81 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~- 158 (216)
+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..
T Consensus 85 ~L~i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~ 163 (214)
T 3jz7_A 85 SINVTNLQLSDIGTYQCKVKKAPGVA-NKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQ 163 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTC
T ss_pred cEEEccCChhhCeEEEEEEEeCCCcc-ccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCC
Confidence 79999999999999999999876654 55678888877754433333457789999999999 8899999999996543
Q ss_pred -CCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 159 -MPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 159 -~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
+..........+.|.|.++..+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 164 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 164 TMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp CCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred ccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 33222222345689999999999999999999999999999998887543
No 36
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=1.9e-27 Score=171.77 Aligned_cols=196 Identities=20% Similarity=0.243 Sum_probs=149.9
Q ss_pred HhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEee-CCEEeccccCceEEEecCcEEEEcccCC
Q psy573 12 EEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKK-NGHPIDFENSKRLRLVDGTNLAIQDSRK 89 (216)
Q Consensus 12 ~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 89 (216)
.+..+.|.|...+..+...+....+.+|+.+.|.|.+ .+.+.+ .+.|++ ++..+ ....++....++.|.|.+++.
T Consensus 77 ~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~~~~~~~~v~W~~~~~~~~--~~~~~~~~~~~~~L~i~~v~~ 153 (289)
T 3ejj_X 77 GSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLI-TDPALKDSVSLMREGGRQV--LRKTVYFFSPWRGFIIRKAKV 153 (289)
T ss_dssp -CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEE-SCGGGGGSEEEEEGGGEEC--CTTCCEEEETTTEEEESSCCG
T ss_pred ceeEEEEEEeCCCcceecccceEEEecCCceEeEEEc-cCCCcceEEEEEecCCeec--CCCccEEECCCCCEEEeeccc
Confidence 3555667766654456777888899999999999998 454544 499987 55555 334456666778899999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccCCCCCe
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAMPEDRM 164 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~~ 164 (216)
+|+|.|+|.+.+.........+.|.|. .+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.....
T Consensus 154 ~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~ 233 (289)
T 3ejj_X 154 LDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLN 233 (289)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEE
T ss_pred ccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCC
Confidence 999999999995443334566788887 5777777777777789999999999987 68899999999987765322
Q ss_pred e------eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 165 S------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 165 ~------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
. ....+.|.|.++..+|.|.|+|.+.|..|....++.|.+...+.+
T Consensus 234 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~~ 285 (289)
T 3ejj_X 234 SDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHHH 285 (289)
T ss_dssp EEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC-----
T ss_pred cccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecccc
Confidence 1 122467999999999999999999999999999999988866543
No 37
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.96 E-value=2.3e-27 Score=161.51 Aligned_cols=177 Identities=30% Similarity=0.574 Sum_probs=137.2
Q ss_pred ccceEeccc--ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPK--SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~--~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~ 100 (216)
||.+...+. ...+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++... .+..|.|.+++.+|+|.|+|.+.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEEN--EKYILKGSNTELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEE-ECSSCCEEEEEETTEECCCS--SSEEEETTTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEee-ccCCCCeEEEEECCeEcCCC--ccEEEeCCeeEEEEecCChhcCcEEEEEEE
Confidence 455655443 4678899999999998 67788899999999987433 334333 35689999999999999999999
Q ss_pred cCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeC--CccCCC------CCeeee---cC
Q psy573 101 NVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRL--GSAMPE------DRMSVL---PS 169 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~~------~~~~~~---~~ 169 (216)
+..+.. ...+.|.|..+|.+...+ ...+..|+.+.|.|.+.+.|.+.+.|+++ +..+.. .+.... ..
T Consensus 79 ~~~~~~-~~~~~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (192)
T 2va4_A 79 NKAGED-EKQAFLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGS 156 (192)
T ss_dssp ETTEEE-EEEEEEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTE
T ss_pred cccccc-ceEEEEEEEccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCc
Confidence 876654 356678888888765543 45677899999999999999999999998 333322 122221 12
Q ss_pred CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 170 RSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
..|.|.++..+|.|.|+|.+.|..|....++.|.|+
T Consensus 157 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 157 SSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred eEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 579999999999999999999999999888888773
No 38
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=9.7e-28 Score=173.52 Aligned_cols=191 Identities=15% Similarity=0.231 Sum_probs=147.0
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCC-CeeEEe-eCCEEeccccCceEEEecCcEEEEcccCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPE-PTLVWK-KNGHPIDFENSKRLRLVDGTNLAIQDSRKT 90 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~-~~~~W~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 90 (216)
+..+.|.|...+..+ ..+....+.+|+.+.|.|.+ .+ |. +.+.|+ +++..+ ....++....+..|.|.+++.+
T Consensus 81 ~~~~~l~V~~~~~~~-~~~~~~~~~~g~~v~l~C~~-~~-p~~~~v~W~~~~g~~l--~~~~~~~~~~~~~L~i~~v~~~ 155 (290)
T 2o26_X 81 TSSIYVFVRDPAKLF-LVGLPLFGKEDSDALVRCPL-TD-PQVSQYSLIECDGKSL--PTDLTFVPNPKAGITIKNVKRA 155 (290)
T ss_dssp EEEEEEEEECSSCCB-CCCCCEEEETTSCEEECCCB-SC-CSCEEEEEEETTSCCC--CTTCEEEEETTTEEEEESCCGG
T ss_pred cEEEEEEEeCCCccc-ccccceEEecCCeEEEeCcC-CC-CCCceEEEEeCCCcCC--CCCCceeeCCCCCEEEecccHH
Confidence 455667776643333 66677889999999999998 44 77 899995 577666 3345556666778999999999
Q ss_pred CCc-eEEEEEEcCCCCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcE-EEEeeCCccC----C
Q psy573 91 DDG-RYQCVVKNVAGTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLT-VHWKRLGSAM----P 160 (216)
Q Consensus 91 d~g-~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~----~ 160 (216)
|+| .|+|.+.+..+...+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+ .
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~ 235 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQ 235 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCC
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCcccee
Confidence 999 99999999755444455777776 677777777777889999999999999999886 9999998772 2
Q ss_pred CCCe-------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 161 EDRM-------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 161 ~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
.... .....+.|.|.++..+|+|.|+|.+.|..|..+..+.|.|.++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 236 VKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred ecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 2111 12234679999999999999999999999999999999888765
No 39
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=1.6e-27 Score=187.28 Aligned_cols=187 Identities=22% Similarity=0.444 Sum_probs=152.9
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cC--cEEEEcccCCC
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DG--TNLAIQDSRKT 90 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~--~~l~i~~~~~~ 90 (216)
..+.|.|.. +|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .++... .+ ..|.|.++..+
T Consensus 375 ~~~~l~V~~-~P~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~ 450 (570)
T 3b43_A 375 SSTSLKVKE-PPVFRKKPHPVETLKGADVHLECEL-QGTPPFQVSWHKDKRELRSG--KKYKIMSENFLTSIHILNVDSA 450 (570)
T ss_dssp EEEEECEEC-CCEECSCCCCEEECTTCCEEEEEEE-ESSSSCCCEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGG
T ss_pred EEEEEEecC-CCeeecCCCceeecCCCEEEEEEEE-ecCCCCEEEEEECCEECcCC--CCEEEEEcCCEEEEEECCCChh
Confidence 345666654 4777777888889999999999998 78899999999999987433 233322 22 47999999999
Q ss_pred CCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC--CCeeee-
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE--DRMSVL- 167 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~- 167 (216)
|+|.|.|.+.|..|.. .....|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. .+....
T Consensus 451 D~G~Y~C~A~N~~G~~-~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~ 529 (570)
T 3b43_A 451 DIGEYQCKASNDVGSD-TCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISY 529 (570)
T ss_dssp GCEEEEEEEECSSCEE-EEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECC
T ss_pred hCEEEEEEEEECCCeE-EEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEE
Confidence 9999999999988875 446788899999998888888899999999999999999999999999865432 233332
Q ss_pred --cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 168 --PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 168 --~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
...+|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 530 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 530 SENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp CSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 22579999999999999999999999999999988775
No 40
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.96 E-value=7.9e-27 Score=156.77 Aligned_cols=165 Identities=18% Similarity=0.287 Sum_probs=130.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCe-eEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPT-LVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+.+.|....+.+|+.++|.|.+ .+.+.+. +.|++++..+. ..+..|.|.+++.+|+|.|+|.+.+.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~~~~W~~~~~~~~---------~~~~~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQG-AYSPEDNSTQWFHNESLIS---------SQASSYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEEC-CCBTTBCCCEEEETTEEEE---------SSCSEEEESSCCGGGCEEEEEECSSS
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeC-CCCCCCcceEEEECCEEcc---------CCceEEEEeCCCcccCEEEEEEeeCC
Confidence 4667778877889999999999998 5656554 78999998773 23568999999999999999999874
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccCCCCCeeeecCCeEEEecCCCCC
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLED 181 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (216)
.+ +..+.|.|..++..... ....+.+|+.+.|.|.+.+.++ +.+.|++++..+.. ......|.|.++..+|
T Consensus 77 ~~---s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~----~~~~~~L~i~~v~~~d 148 (175)
T 1fnl_A 77 TL---SDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY----FHHNSDFHIPKATLKD 148 (175)
T ss_dssp CC---CCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGG
T ss_pred cc---cccEEEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC----CCCCCEEEEcccChhh
Confidence 43 44567777766555444 3467889999999999987765 59999999987531 2346789999999999
Q ss_pred CeEEEEEEEcCCcc-eEEEEEEEEEe
Q psy573 182 GGEYVCEAENAVGK-ISASATLTVQS 206 (216)
Q Consensus 182 ~g~y~C~~~n~~~~-~~~~~~l~v~~ 206 (216)
.|.|+|.+.|..+. .+..+.|.|.+
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 149 SGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999997654 66677777764
No 41
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.96 E-value=5e-27 Score=177.01 Aligned_cols=170 Identities=26% Similarity=0.435 Sum_probs=143.0
Q ss_pred ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccceeE
Q psy573 33 SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAV 112 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 112 (216)
...+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ........++.|.|.++..+|+|.|+|.+.|..+.. ...+.
T Consensus 231 ~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~ 306 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIA-SGVPTPDIAWYKKGGDLPS--DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTIS 306 (404)
T ss_dssp EEEEETTSCEEEECCB-CCSSCCEEEEEETTBCCCT--TTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEE-EEEEE
T ss_pred CceEecCCCEEEEEEE-CCCCCCcEEEEECCEECCC--CcccccccCceEEEccCCHhHCEEEEEEEEeCCCcE-EEEEE
Confidence 4678999999999988 7888889999999987732 222333446789999999999999999999988764 55788
Q ss_pred EEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC---eeeecCCeEEEecCCCCCCeEEEEEE
Q psy573 113 LRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR---MSVLPSRSLQLSDVRLEDGGEYVCEA 189 (216)
Q Consensus 113 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~---~~~~~~~~l~i~~~~~~d~g~y~C~~ 189 (216)
|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .....++.|.|.++..+|+|.|+|.|
T Consensus 307 l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 386 (404)
T 3p3y_A 307 VRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNT 386 (404)
T ss_dssp EEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEE
T ss_pred EEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEE
Confidence 899999988888888899999999999999999999999999998775321 22335678999999999999999999
Q ss_pred EcCCcceEEEEEEEEEe
Q psy573 190 ENAVGKISASATLTVQS 206 (216)
Q Consensus 190 ~n~~~~~~~~~~l~v~~ 206 (216)
.|..|.....+.|.|.+
T Consensus 387 ~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 387 SNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EETTEEEEEEEEEEEC-
T ss_pred EeCCCcEEEEEEEEEEe
Confidence 99999999999888764
No 42
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.96 E-value=3.1e-27 Score=163.62 Aligned_cols=177 Identities=15% Similarity=0.208 Sum_probs=126.9
Q ss_pred cccceEEecC--CcEEEEeeCCCCCCCCeeEEeeC---CEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCC
Q psy573 30 QPKSQRVAAG--DTALLECGPPRGHPEPTLVWKKN---GHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAG 104 (216)
Q Consensus 30 ~~~~~~~~~G--~~~~l~C~~~~~~~~~~~~W~~~---~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 104 (216)
.|..+.+.+| +.++|.|.+ .+ |.+.+.|++. +..+. ...+.....+..|.|.+++.+|+|.|+|.+.+..+
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~-~~-p~~~v~w~~~~~~g~~~~--~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLG-SI-SNLNVSLCARYPEKRFVP--DGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCB-SS-TTCCEEEEEETTTEEECC--CSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----
T ss_pred CceEEEEecCCCccEEEeecc-CC-CCcEEEEEhhcCCCcccc--CCCcccccCCccEEEccCChhcCceEEEEEEECCe
Confidence 4567889999 999999998 44 6789999885 54442 22334445567899999999999999999988544
Q ss_pred CcccceeEEEEee--cceEEeCCC-ceeEeCCCcEEEEEEeCCCC--CcEEEEeeCCccCCCCCe---e---------ee
Q psy573 105 TRESTDAVLRVLV--KPYIIRGPK-DTTVSAGSIIVFECSVGGDA--VLTVHWKRLGSAMPEDRM---S---------VL 167 (216)
Q Consensus 105 ~~~~~~~~l~v~~--~p~~~~~~~-~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~~~~~~~~~---~---------~~ 167 (216)
...+..+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+.| .+.+.|++++..+..... . ..
T Consensus 89 ~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
T 2x1w_L 89 SYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168 (213)
T ss_dssp CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred eEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee
Confidence 4334446666643 344444333 34889999999999998754 457999998876533211 0 11
Q ss_pred cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 168 PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
..++|.|.+++.+|+|.|+|.+.|..|..+..+.|.|.++|.+
T Consensus 169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred eeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 1246999999999999999999999999999999999988754
No 43
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.96 E-value=8.9e-27 Score=174.95 Aligned_cols=183 Identities=21% Similarity=0.385 Sum_probs=147.1
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEeccc---cCceEEEe---cCcEEEEcccCCCCCceEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPIDFE---NSKRLRLV---DGTNLAIQDSRKTDDGRYQ 96 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~~~~---~~~~~~~~---~~~~l~i~~~~~~d~g~y~ 96 (216)
|.+.. +.+..+.+|+.+.|.|.+ .+.|.+.+.|+++ +..+... ...++... ..+.|.|.+++.+|+|.|.
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~-~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDA-EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEE-ECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEe-ecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 44444 667788999999999998 7888999999999 8877431 13444443 2358999999999999999
Q ss_pred EEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC---Ceeee---cCC
Q psy573 97 CVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED---RMSVL---PSR 170 (216)
Q Consensus 97 C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~---~~~~~---~~~ 170 (216)
|.+.|..+.. ...+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... +.... ...
T Consensus 80 C~a~n~~g~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 158 (389)
T 2jll_A 80 CEAASRIGGH-QKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKM 158 (389)
T ss_dssp EEEECSSCEE-EEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCE
T ss_pred EEEEeCCCCc-ceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEE
Confidence 9999988765 5678899999998876665557889999999999999999999999999887643 23322 234
Q ss_pred eEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 171 SLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 171 ~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.|.|.++..+|.|.|+|.+.|..|.....+.+.+...|..
T Consensus 159 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~ 198 (389)
T 2jll_A 159 ILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSS 198 (389)
T ss_dssp EEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCC
T ss_pred EEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCC
Confidence 6999999999999999999999999888888887765543
No 44
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.95 E-value=2.8e-27 Score=177.29 Aligned_cols=176 Identities=28% Similarity=0.476 Sum_probs=147.0
Q ss_pred ccceEec-ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQ-PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~-~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+... +....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ....+..|.|.++..+|+|.|+|.+.+.
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~-----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 279 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFA-FGNPVPQIKWRKLDGSQTSK-----WLSSEPLLHIQNVDFEDEGTYECEAENI 279 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEE-EEESCCEEEEEECCSCCSCC-----CSBSSSEEEECSCCGGGCEEEEEEEEET
T ss_pred CCceeccCCCceEEeCCCeEEEEEEE-ccCCCCEEEEEECCcccccE-----EecCCcEEEEccCChhhCEEEEEEEEcC
Confidence 3445443 557789999999999998 67788899999987765321 1133568999999999999999999998
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCC
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDG 182 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (216)
.+.. ...+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..........+.|.|.++..+|+
T Consensus 280 ~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~ 358 (382)
T 1cs6_A 280 KGRD-TYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDS 358 (382)
T ss_dssp TEEE-EEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGC
T ss_pred CCeE-EEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccC
Confidence 7764 556788888899888888888999999999999999999999999999998876544444567899999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEe
Q psy573 183 GEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
|.|+|.+.|..|....++.|.|.+
T Consensus 359 G~Y~C~a~N~~G~~~~~~~l~V~a 382 (382)
T 1cs6_A 359 GMYQCVAENKHGTVYASAELTVQA 382 (382)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCeEEEEEEEEEeC
Confidence 999999999999999999988863
No 45
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=8.4e-27 Score=175.80 Aligned_cols=198 Identities=30% Similarity=0.472 Sum_probs=157.6
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecc-ccCceEEEecCcEEEEcccCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDF-ENSKRLRLVDGTNLAIQDSRKTD 91 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d 91 (216)
+..+.|.|.. ++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ....+.....++.|.|.+++.+|
T Consensus 111 s~~~~l~v~~-p~~~~~~~~~~~~~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 188 (403)
T 3laf_A 111 SRTAKVMVAG-PLRFLSQTESITAFMGDTVLLKCEV-IGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGD 188 (403)
T ss_dssp CCCEEEEECC-CCEECSCCCCEEEETTSCEEECCCE-ECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGG
T ss_pred EEEEEEEecC-CCccccCCCcEEEEcCCeEEEEEEE-cccCCCeEEEEECCEeccccCCceEEEEcCCceEEEccccccc
Confidence 3445555544 4666667778899999999999988 6778889999999887743 23344555567789999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEeecc------eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC--C
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLVKP------YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED--R 163 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~ 163 (216)
+|.|+|.+.+..+........+.+...| .+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .
T Consensus 189 ~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~ 268 (403)
T 3laf_A 189 SGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKK 268 (403)
T ss_dssp CEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSS
T ss_pred CEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCce
Confidence 9999999999776654556677776554 3445566778889999999999999999999999999877542 3
Q ss_pred eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 164 MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 164 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
........|.|.++..+|+|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 269 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 317 (403)
T 3laf_A 269 YSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLN 317 (403)
T ss_dssp EEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE
T ss_pred EEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEee
Confidence 4444667899999999999999999999999999999999998876644
No 46
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.95 E-value=5.5e-27 Score=163.98 Aligned_cols=187 Identities=28% Similarity=0.428 Sum_probs=140.5
Q ss_pred ccceEecc----cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCc--eEEEecCcEEEEcccCCCCCceEEE
Q psy573 24 REEFRVQP----KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSK--RLRLVDGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 24 ~~~~~~~~----~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~g~y~C 97 (216)
+|.|...+ ....+.+|+.+.|.|.+ .+.|.+.+.|++++..+...... ......+..|.|.+++.+|+|.|+|
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEec-ccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 45554444 67889999999999988 67788899999999987533221 1223345689999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeec----ceEEe-CCCceeEeCCCcEEEEEEeCCCCCcEEEEee----CCccCCCCCee---
Q psy573 98 VVKNVAGTRESTDAVLRVLVK----PYIIR-GPKDTTVSAGSIIVFECSVGGDAVLTVHWKR----LGSAMPEDRMS--- 165 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~~~--- 165 (216)
.+.+..+.. .....+.|... |.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+......
T Consensus 94 ~~~n~~~~~-~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 94 VVENEYGSI-NHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEETTEEE-EEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEecccCcc-cccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 999876654 44566666542 22222 2456688899999999999999999999999 66655432111
Q ss_pred --------eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 166 --------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 166 --------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
......|.|.++..+|+|.|+|.+.|..|....++.|.|..+|..+.
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCc
Confidence 11235699999999999999999999999999999999998876543
No 47
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.95 E-value=3.7e-27 Score=163.64 Aligned_cols=181 Identities=18% Similarity=0.163 Sum_probs=128.9
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc--EEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT--NLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.+...|. ..+.+|++++|.|.+ .+ +.+.+.|||++..+............+. .|.|.+++.+|+|.|+|.+.+
T Consensus 9 ~P~i~~~p~-~~v~~G~~vtL~C~~-~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 85 (218)
T 1uct_A 9 MPFISAKSS-PVIPLDGSVKIQCQA-IR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRI 85 (218)
T ss_dssp CCCEEESSC-SEEETTCCEEEEECC-CT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEecCC-CccCCCCCEEEEEEc-CC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEc
Confidence 466666676 578999999999998 44 6789999998776532211100112344 899999999999999999998
Q ss_pred CCCC-cccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecC
Q psy573 102 VAGT-RESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDV 177 (216)
Q Consensus 102 ~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~ 177 (216)
..+. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.+.+.+.|+|++..+............|.|.++
T Consensus 86 ~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v 164 (218)
T 1uct_A 86 GHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPV 164 (218)
T ss_dssp TTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSC
T ss_pred CCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccC
Confidence 6542 224456677754 45555544 457889999999997767778899999999877643222234578999999
Q ss_pred CCCCCeEEEEEEEcCCc-----ceEEEEEEEEEecc
Q psy573 178 RLEDGGEYVCEAENAVG-----KISASATLTVQSKY 208 (216)
Q Consensus 178 ~~~d~g~y~C~~~n~~~-----~~~~~~~l~v~~~p 208 (216)
+.+|+|.|+|.+.|... ..+..+.|.|.+.+
T Consensus 165 ~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 165 DLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp CGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred CcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 99999999999998632 24556777777643
No 48
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.95 E-value=3.1e-27 Score=183.96 Aligned_cols=200 Identities=17% Similarity=0.229 Sum_probs=157.6
Q ss_pred HhhhceeeEE---eeccceEecccceEEecCCcEEEEeeCCCCCCCCe-eEEeeCCEEeccccCceEE------EecCcE
Q psy573 12 EEEKKKLKIE---MLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPT-LVWKKNGHPIDFENSKRLR------LVDGTN 81 (216)
Q Consensus 12 ~~~~~~l~v~---~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~------~~~~~~ 81 (216)
.+..+.|.|. ..+|.+...+....+.+|+.+.|.|.+ .+.|.+. +.|++++..+......... ....+.
T Consensus 196 ~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~-~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (524)
T 2ec8_A 196 LSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTI-KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQAT 274 (524)
T ss_dssp CCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEE-EESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEE
T ss_pred EEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEE-ecCCCcEEEEEEeCCCCCccccccccccccCCccceEEE
Confidence 3456778876 356888888888899999999999998 5667665 9999998873111111111 122467
Q ss_pred EEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCC---ceeEeCCCcEEEEEEeCCCCCcE-EEEeeCCc
Q psy573 82 LAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPK---DTTVSAGSIIVFECSVGGDAVLT-VHWKRLGS 157 (216)
Q Consensus 82 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~ 157 (216)
|.|.++..+|+|.|+|.+.+..+.. ...+.|.|..+|.+...+. ...+.+|+.+.|.|.+.+.|.|. +.|++++.
T Consensus 275 L~I~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~ 353 (524)
T 2ec8_A 275 LTISSARVNDSGVFMCYANNTFGSA-NVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNR 353 (524)
T ss_dssp EEESSCCTTTCEEEEEEEECSSCEE-EEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSC
T ss_pred EEECCCCHHHCEEEEEEEEecCCce-EEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCe
Confidence 9999999999999999999988775 3478888988887765443 56888999999999999999998 99999998
Q ss_pred cCCCCC--eeeec-------CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeeec
Q psy573 158 AMPEDR--MSVLP-------SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVIH 213 (216)
Q Consensus 158 ~~~~~~--~~~~~-------~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~~ 213 (216)
.+.... ..... ...|.|.++..+|+|.|+|.+.|..|....++.|.|..+|.+...
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~ 418 (524)
T 2ec8_A 354 TFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTY 418 (524)
T ss_dssp BCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEE
T ss_pred eccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeec
Confidence 876543 21111 247999999999999999999999999999999999988876543
No 49
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.95 E-value=2.1e-26 Score=159.15 Aligned_cols=171 Identities=17% Similarity=0.238 Sum_probs=128.2
Q ss_pred EecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC-cEEEEcccCCCCCceEEEEEEcCCCCcccceeEEE
Q psy573 36 VAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG-TNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLR 114 (216)
Q Consensus 36 ~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~ 114 (216)
...|+.+.|.|.+....|.+.+.|++++..+............+ ..|.|.+++.+|+|.|+|.+.+..+.. ...+.+.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH-QKTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEE-EEEEEEC
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcce-EEEEEEE
Confidence 34678888888883335688999999999885433322222222 359999999999999999999876654 3344444
Q ss_pred Eee--------------------cce-EEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeeec--C-
Q psy573 115 VLV--------------------KPY-IIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVLP--S- 169 (216)
Q Consensus 115 v~~--------------------~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~~--~- 169 (216)
+.. .|. +...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ..... .
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 172 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGR 172 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTT
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCC
Confidence 331 233 3344556788999999999999999999999999998876543 22221 1
Q ss_pred -CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 170 -RSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 170 -~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
..|.|.++..+|.|.|+|.+.|..|.....+.|.|..+
T Consensus 173 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 173 TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 37999999999999999999999999999988888743
No 50
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.95 E-value=6.5e-28 Score=187.38 Aligned_cols=191 Identities=14% Similarity=0.200 Sum_probs=143.6
Q ss_pred ceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCce-EE------EecCcEEEEcccC
Q psy573 16 KKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKR-LR------LVDGTNLAIQDSR 88 (216)
Q Consensus 16 ~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~-~~------~~~~~~l~i~~~~ 88 (216)
+.|.|... |.+ .+....+.+|+.+.|.|.+..+.|.+.+.|++++..+....... .. ......|.|.+++
T Consensus 222 ~~l~V~~~-p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 298 (527)
T 3qs9_E 222 FTIDLNQT-PQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVA 298 (527)
T ss_dssp EEEESSSC-CCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCC
T ss_pred EEEEEecc-Ccc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCC
Confidence 44554433 333 55678899999999999983378889999999988763321110 11 1122469999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCC--ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeee
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPK--DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSV 166 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~ 166 (216)
.+|+|.|+|.+.|. ....+.|.|..+|.+...+. ...+.+|+.+.|.|.+.+.|.|.+.|++++..+.......
T Consensus 299 ~~DsG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~ 374 (527)
T 3qs9_E 299 RNDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL 374 (527)
T ss_dssp GGGCEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC
T ss_pred cccCeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc
Confidence 99999999999887 35567888888887655443 3567789999999999999999999999998875443333
Q ss_pred ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeeec
Q psy573 167 LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVIH 213 (216)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~~ 213 (216)
.....|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.+...
T Consensus 375 ~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~ 421 (527)
T 3qs9_E 375 DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAE 421 (527)
T ss_dssp SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEEC
T ss_pred cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEe
Confidence 35568999999999999999999999999999999999998877543
No 51
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.95 E-value=8.8e-27 Score=156.67 Aligned_cols=168 Identities=20% Similarity=0.336 Sum_probs=131.0
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+...|....+.+|+.++|.|.+ .+.+.+ .+.|++++..+.. .+..|.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~i~W~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~~~~~ 73 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNG-NNFFEVSSTKWFHNGSLSEE---------TNSSLNIVNAKFEDSGEYKCQHQQV 73 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCT-TCC----CCEEEETTEECSC---------CSSEEEECSCCGGGCEEEEEECTTS
T ss_pred CCEEEcCCCCcceecCCcEEEEEeC-CCCCCcceEEEEECCeECCC---------CceEEEEeccceecCEEEEEEcCCc
Confidence 4677788888899999999999998 555553 6999999987732 2568999999999999999999875
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCC
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLED 181 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (216)
.+ +..+.|.|..++..... ....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.++..+|
T Consensus 74 ~~---s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----~~~~~L~i~~v~~~d 145 (176)
T 1f2q_A 74 NE---SEPVYLEVFSDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW----YENHNISITNATVED 145 (176)
T ss_dssp SC---CCCEEEEEECSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC----CCSSEEEESSCCGGG
T ss_pred cc---cccEEEEEeCcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee----cCCCeEEECCCCccc
Confidence 43 34567777755544433 33578899999999999 45667799999999877432 235789999999999
Q ss_pred CeEEEEEEEcCCcc-eEEEEEEEEEecce
Q psy573 182 GGEYVCEAENAVGK-ISASATLTVQSKYL 209 (216)
Q Consensus 182 ~g~y~C~~~n~~~~-~~~~~~l~v~~~p~ 209 (216)
+|.|+|.+.|..+. .+..+.|.|..+|.
T Consensus 146 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 146 SGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999997544 56668888888774
No 52
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.95 E-value=5.3e-27 Score=159.41 Aligned_cols=177 Identities=17% Similarity=0.167 Sum_probs=125.1
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|.. .+.+|++++|.|.+ .+ +...+.|||++..+............+..|.|.+++.+|+|.|+|.+.+..
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeecCC-cCCCCCCEEEEEec-CC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 4566667766 78999999999998 33 456899999998764211111111234579999999999999999998754
Q ss_pred CC-cccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCC
Q psy573 104 GT-RESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRL 179 (216)
Q Consensus 104 ~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (216)
+. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+ +.+.+.|+|++..+............|.|.+++.
T Consensus 81 ~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~ 158 (188)
T 1oll_A 81 LWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTT 158 (188)
T ss_dssp EECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEECCG
T ss_pred CCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCCCc
Confidence 32 224456677753 45555444 456889999999999865 4568999999876643211122346799999999
Q ss_pred CCCeEEEEEEEcCCc---ceEEEEEEEEE
Q psy573 180 EDGGEYVCEAENAVG---KISASATLTVQ 205 (216)
Q Consensus 180 ~d~g~y~C~~~n~~~---~~~~~~~l~v~ 205 (216)
+|+|.|+|.+.|... ..+..+.|.|.
T Consensus 159 ~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 159 AHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp GGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 999999999988642 24445666554
No 53
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.95 E-value=2.5e-26 Score=166.03 Aligned_cols=184 Identities=18% Similarity=0.337 Sum_probs=143.1
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEee-CCEEeccccCceEEEec---CcEEEEcccCCCCCceEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKK-NGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~ 99 (216)
+|.+.+.+.+..+.+|+.+.|.|.+ .+.| +.+.|++ ++..+.. ..++.... ...|.|.+++.+|+|.|+|.+
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~-~~~p-~~v~W~~~~g~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTA-IGEP-ESIDWYNPQGEKIIS--TQRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEE-ESCC-SEEECBCTTCCBCCC--BTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CceEEEeccceEecCCCcEEEEEEE-eCCC-CceEEECCCCcCccC--CCcEEEecCCCEEEEEEccCCcccCEEEEEEE
Confidence 5788888989999999999999998 5655 4899999 6665532 22333322 247999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC---CCCeeeecCCeEEEec
Q psy573 100 KNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP---EDRMSVLPSRSLQLSD 176 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~~ 176 (216)
.+..+......+.+.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..+.....++.|.|.+
T Consensus 80 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 159 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILN 159 (291)
T ss_dssp ECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETT
T ss_pred ecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEe
Confidence 9987765556677888888877777777889999999999999999999999999987764 2344445667899999
Q ss_pred CCCCCCeEEEEEEEcCCcc--eEEEEEEEEEecceee
Q psy573 177 VRLEDGGEYVCEAENAVGK--ISASATLTVQSKYLKV 211 (216)
Q Consensus 177 ~~~~d~g~y~C~~~n~~~~--~~~~~~l~v~~~p~~~ 211 (216)
+..+|.|.|+|.+.|..+. ....+.+.+..+|.+.
T Consensus 160 v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~ 196 (291)
T 2wim_A 160 INKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAIS 196 (291)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCB
T ss_pred cchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccc
Confidence 9999999999999998754 3455677777776543
No 54
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.95 E-value=8.9e-28 Score=165.56 Aligned_cols=178 Identities=22% Similarity=0.404 Sum_probs=136.2
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEe----------ccccCceEEEecCcEEEEcccCCCCCce
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPI----------DFENSKRLRLVDGTNLAIQDSRKTDDGR 94 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 94 (216)
..+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+ ......++.... ..|.|.+++.+|+|.
T Consensus 5 ~~i~~~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 5 VTVHSSEPEVRIPENNPVKLSCAY-SGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-TGITFKSVTREDTGT 82 (209)
T ss_dssp CEEECSCSBCCEETTCCCEEECEE-ESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-TEEECSCCCTTSCSE
T ss_pred EEEEcCCCceEEEcCCCEEEEEEE-eCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-cEEEEeeCCHHHCcE
Confidence 455566777889999999999998 66688899999976542 122233344333 789999999999999
Q ss_pred EEEEEEcCCCC-cccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCe--------
Q psy573 95 YQCVVKNVAGT-RESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRM-------- 164 (216)
Q Consensus 95 y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~-------- 164 (216)
|+|.+.+..+. .....+.|.|..+|.+........+..|+.+.|.|.+ .+.|.+.+.|++++..+.....
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 162 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNS 162 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTC
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeecc
Confidence 99999987542 2245667778888876665666678999999999997 8899999999999987754321
Q ss_pred --ee-ecCCeEEEecCCCCCCeEEEEEEEcCCcce--EEEEEEEE
Q psy573 165 --SV-LPSRSLQLSDVRLEDGGEYVCEAENAVGKI--SASATLTV 204 (216)
Q Consensus 165 --~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~--~~~~~l~v 204 (216)
.. ...+.|.|.++..+|.|.|+|.+.|..|.. +..+.|.|
T Consensus 163 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 163 SYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred ceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 11 134689999999999999999999999987 34444444
No 55
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.95 E-value=1.4e-26 Score=158.55 Aligned_cols=177 Identities=16% Similarity=0.202 Sum_probs=124.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|. ..+.+|++++|.|.+ .+.+. .+.|++++..+............+..|.|.+++.+|+|.|+|.+.+..
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQG-GQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEC-CTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCeEeccCC-CcccCCCcEEEEEEe-cCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 466666665 488999999999998 55554 799999988763221111112345789999999999999999999876
Q ss_pred -CC-cccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCee--ee----cCCeE
Q psy573 104 -GT-RESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMS--VL----PSRSL 172 (216)
Q Consensus 104 -~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~--~~----~~~~l 172 (216)
+. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+...... .. ....|
T Consensus 82 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L 159 (198)
T 1ugn_A 82 AGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIF 159 (198)
T ss_dssp TEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEE
T ss_pred CCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEE
Confidence 32 224556777776 44554433 3578899999999999887 7899999999876433221 11 13679
Q ss_pred EEecCCCCCCeEEEEEEEcCCcc-----eEEEEEEEEE
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGK-----ISASATLTVQ 205 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~-----~~~~~~l~v~ 205 (216)
.|.++..+|.|.|+|.+.|..+. .+..+.|.|.
T Consensus 160 ~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 160 SVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 99999999999999999998652 2445666554
No 56
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.3e-26 Score=156.93 Aligned_cols=157 Identities=20% Similarity=0.234 Sum_probs=120.1
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|.. .+.+|++++|.|.+ .+ +.+.+.|++++.. ....+..|.|.+++.+|+|.|+|.+.+..
T Consensus 8 ~P~i~~~p~~-~v~~G~~v~L~C~~-~~-~~~~~~W~k~g~~---------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 8 KPSLQALPSS-LVPLEKPVTLRCQG-PP-GVDLYRLEKLSSS---------RYQDQAVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEEC-ST-TCSEEEEEETTTC---------CEESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCeEEeCCCc-cccCCCcEEEEEeC-CC-CCCEEEEEECCcc---------ccCcccEEEECcCChhhCceEEEEEEcCC
Confidence 4566666664 78999999999998 44 6789999998765 12446789999999999999999999866
Q ss_pred CC-cccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCC
Q psy573 104 GT-RESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRL 179 (216)
Q Consensus 104 ~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (216)
+. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.+ +.+.|++++..+............|.|.++..
T Consensus 76 g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~ 153 (184)
T 2gi7_A 76 LWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPERWYRASFPIITVTA 153 (184)
T ss_dssp EEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCEEEEESSSEEEETT
T ss_pred CccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCCCceEEEEEccCCc
Confidence 42 224456677743 45555444 45677899999999987554 69999999987754332233456799999999
Q ss_pred CCCeEEEEEEEcCCc
Q psy573 180 EDGGEYVCEAENAVG 194 (216)
Q Consensus 180 ~d~g~y~C~~~n~~~ 194 (216)
+|.|.|+|.+.|..+
T Consensus 154 ~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 154 AHSGTYRCYSFSSRD 168 (184)
T ss_dssp CCSEEEEEEEECTTS
T ss_pred cCCeEEEEEEEeCCC
Confidence 999999999999754
No 57
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=6.2e-26 Score=170.30 Aligned_cols=203 Identities=26% Similarity=0.395 Sum_probs=145.6
Q ss_pred hhhHhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccC
Q psy573 9 EKEEEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSR 88 (216)
Q Consensus 9 ~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 88 (216)
+...+..+.|.+...++.....+....+.+|+.+.|.|....+.+.+.+.|++++..+. ....++....++.|.|.++.
T Consensus 87 G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~-~~~~~~~~~~~~~L~I~~v~ 165 (384)
T 3kld_A 87 GTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY-QDNRRFVSQETGNLYIAKVE 165 (384)
T ss_dssp EEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECC-CSSSEEECTTTCCEEESSCC
T ss_pred ccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCE-eeccEEEEcCCCcEEEeecC
Confidence 33344556677665533222233457899999999999764455678999999998763 22233333446689999999
Q ss_pred CCCCceEEEEEEcCCCCcc--cceeEEEEe-------ecceEE-eCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCc-
Q psy573 89 KTDDGRYQCVVKNVAGTRE--STDAVLRVL-------VKPYII-RGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGS- 157 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~--~~~~~l~v~-------~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~- 157 (216)
.+|+|.|+|.+.|..+... .....+.+. ..|.+. ..+....+.+|+.+.|.|.+.+.|.|.+.|++++.
T Consensus 166 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~ 245 (384)
T 3kld_A 166 KSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGK 245 (384)
T ss_dssp GGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCC
T ss_pred HHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCc
Confidence 9999999999998765431 111122221 223332 34556678899999999999999999999999554
Q ss_pred cCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 158 AMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 158 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
.+..........+.|.|.++..+|+|.|+|.+.|..|.......|.|..+|.+..
T Consensus 246 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~ 300 (384)
T 3kld_A 246 PIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQ 300 (384)
T ss_dssp CCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE
T ss_pred cccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCcccc
Confidence 4443333333457899999999999999999999999998889999998887644
No 58
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.95 E-value=3.2e-27 Score=179.05 Aligned_cols=177 Identities=15% Similarity=0.210 Sum_probs=128.2
Q ss_pred cccceEEecCCcEEEEeeCCCC-CCCCeeEEeeCCEEeccccCc-eEE------EecCcEEEEcccCCCCCceEEEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRG-HPEPTLVWKKNGHPIDFENSK-RLR------LVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~~~~-~~~------~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.+....+.+|+.+.|.|.+ .+ .|.+.+.|++++..+...... ... ....+.|.|.+++.+|+|.|+|.+.|
T Consensus 233 ~~~~~~v~~G~~v~L~C~~-~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 311 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKA-VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (423)
T ss_dssp STTEEEEETTSCEEEEEEE-EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETT
T ss_pred CCCceEEeCCCeEEEEEEE-EcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEec
Confidence 4456789999999999998 55 677899999998876322110 001 11234799999999999999999988
Q ss_pred CCCCcccceeEEEEeecceEEeCC--CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCC
Q psy573 102 VAGTRESTDAVLRVLVKPYIIRGP--KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRL 179 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (216)
. ....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+............+.......
T Consensus 312 ~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~ 387 (423)
T 3qs7_E 312 H----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHK 387 (423)
T ss_dssp E----EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCT
T ss_pred C----CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEeccc
Confidence 7 3556788888888776554 345677899999999999999999999999988754321111122232356677
Q ss_pred CCCeEEEEEEEcCCcceEEEEEEEEEecceee
Q psy573 180 EDGGEYVCEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 180 ~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
+|+|.|+|.|.|..|..+.++.|.|...|..+
T Consensus 388 ~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 388 HQPGEYIFHAENDDAQFTKMFTLNIRSGTKHH 419 (423)
T ss_dssp TCCSCEEEEEEETTEEEEEEEEEC--------
T ss_pred ccCEEEEEEEEcCCceEEEEEEEEEecCCccc
Confidence 89999999999999999999999999877543
No 59
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.95 E-value=2.9e-27 Score=161.71 Aligned_cols=166 Identities=16% Similarity=0.219 Sum_probs=111.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|.. .+.+|++++|.|.+ .+.+. .+.||+++..+............++.|.|.+++.+|+|.|+|.+.+..
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 5 KATLWAEPGS-VISRGNSVTIRCQG-TLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp BCEEEEESCS-EEETTCCEEEEEEC-CTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeCCCC-cccCCCeEEEEEeC-CCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 4667777764 78999999999998 55554 999999988663211100011234579999999999999999998865
Q ss_pred CCc-ccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCee--ee----cCCeEE
Q psy573 104 GTR-ESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMS--VL----PSRSLQ 173 (216)
Q Consensus 104 ~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~--~~----~~~~l~ 173 (216)
+.. .+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.| +.+.|++++..+...... .. ....|.
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~ 159 (196)
T 2d3v_A 82 GWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFP 159 (196)
T ss_dssp EECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEE
T ss_pred CcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEE
Confidence 432 24456777766 45554443 34788999999999999888 899999999876432111 11 126799
Q ss_pred EecCCCCCCeEEEEEEEcCCc
Q psy573 174 LSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 174 i~~~~~~d~g~y~C~~~n~~~ 194 (216)
|.+++.+|+|.|+|.+.|..+
T Consensus 160 I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 160 VGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp CCCCBTTBCEEEEEEEEETTE
T ss_pred eeecCcccCeeEEEEEEccCC
Confidence 999999999999999998764
No 60
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.95 E-value=6.7e-27 Score=159.90 Aligned_cols=177 Identities=19% Similarity=0.282 Sum_probs=127.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|.. .+.+|++++|.|.+ .+ +.+.+.|++++..+............+..|.|.+++.+|+|.|+|.+.+..
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQG-TL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEEC-CT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeC-CC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 4566667766 88999999999998 44 668999999988663211110001234579999999999999999999877
Q ss_pred C-CcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCee-----eecCCeEEE
Q psy573 104 G-TRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMS-----VLPSRSLQL 174 (216)
Q Consensus 104 ~-~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~-----~~~~~~l~i 174 (216)
+ ...+..+.|.|.. +|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++..+...... ......|.|
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 159 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPM 159 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEe
Confidence 6 2335566777753 3455544433 6789999999999976 45689999998766433211 123467999
Q ss_pred ecCCCCCCeEEEEEEEcCCc-----ceEEEEEEEEE
Q psy573 175 SDVRLEDGGEYVCEAENAVG-----KISASATLTVQ 205 (216)
Q Consensus 175 ~~~~~~d~g~y~C~~~n~~~-----~~~~~~~l~v~ 205 (216)
.++..+|+|.|+|.+.|..+ ..+..+.|.|.
T Consensus 160 ~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 160 SPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp CSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred CCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 99999999999999999876 24445555553
No 61
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=1.3e-26 Score=167.62 Aligned_cols=193 Identities=19% Similarity=0.230 Sum_probs=146.5
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCC--CeeEEeeCC-EEeccccCceEEEecCcEEEEcccCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPE--PTLVWKKNG-HPIDFENSKRLRLVDGTNLAIQDSRK 89 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~--~~~~W~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~ 89 (216)
+..+.|.|...+..+...+....+.+|+.+.|.|.+ .+ +. +.+.|++++ ..+ ....+.....+..|.|.++..
T Consensus 78 ~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~-~~-~~~~~~v~W~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~ 153 (292)
T 4dkd_C 78 SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLL-TD-PVLEAGVSLVRVRGRPL--MRHTNYSFSPWHGFTIHRAKF 153 (292)
T ss_dssp CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEE-SS-GGGGSSEEEEEGGGCCC--CSSCCEECCSSSCCEETTCCG
T ss_pred ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeC-CC-CCcceeEEEEecCCCcc--ccCCcccccCCceEEECCCCH
Confidence 556677776655556677778899999999999998 44 44 689999974 433 233344445556699999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccCCCCCe
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAMPEDRM 164 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~~~~~ 164 (216)
+|+|.|+|.+.+..+...+..+.|.|.. +|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+.....
T Consensus 154 ~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~ 233 (292)
T 4dkd_C 154 IQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQ 233 (292)
T ss_dssp GGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBE
T ss_pred HHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCcc
Confidence 9999999999987665555578888886 788877777777789999999999987664 56889998876654322
Q ss_pred eee------cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 165 SVL------PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 165 ~~~------~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
... ..+.|.|.++..+|+|.|+|.+.|..|..+.++.|.|.....
T Consensus 234 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 284 (292)
T 4dkd_C 234 SDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAG 284 (292)
T ss_dssp EEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-----
T ss_pred ceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCC
Confidence 111 224799999999999999999999999999999999886653
No 62
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.95 E-value=3e-26 Score=172.01 Aligned_cols=164 Identities=30% Similarity=0.478 Sum_probs=136.2
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEec----cccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcc
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPID----FENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRE 107 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 107 (216)
....+.+|+.+.|.|.+ .+.|.+.+.|++++.... .....+.. ..++.|.|.+++.+|+|.|+|.+.|..+..
T Consensus 220 ~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~- 296 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPA-QGFPAPSFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGE- 296 (388)
T ss_dssp CCEEEETTSCEEECCCC-EEESCCEEEEEEECTTSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECSSCEE-
T ss_pred CceEEeeCCcEEEEEEC-CCCCCCEEEEEecCCCCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecCCCce-
Confidence 44678899999999998 677889999999753221 11222332 235689999999999999999999988764
Q ss_pred cceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEE
Q psy573 108 STDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVC 187 (216)
Q Consensus 108 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 187 (216)
...+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.|.|.++..+|+|.|+|
T Consensus 297 ~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~------~~~~L~i~~v~~~d~G~Y~C 370 (388)
T 2v5m_A 297 SVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH------SESVLRIESVKKEDKGMYQC 370 (388)
T ss_dssp EEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC------CSSEEEESSCCGGGCEEEEE
T ss_pred eEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc------CCCEEEEecCChhhCEEEEE
Confidence 556788888888877777778899999999999999999999999999987754 24689999999999999999
Q ss_pred EEEcCCcceEEEEEEEE
Q psy573 188 EAENAVGKISASATLTV 204 (216)
Q Consensus 188 ~~~n~~~~~~~~~~l~v 204 (216)
.|.|..|....++.|.|
T Consensus 371 ~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 371 FVRNDRESAEASAELKL 387 (388)
T ss_dssp EEECSSCEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEEEEe
Confidence 99999999999888876
No 63
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.94 E-value=3.8e-26 Score=166.93 Aligned_cols=189 Identities=13% Similarity=0.190 Sum_probs=141.8
Q ss_pred ceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC------cEEEEcccCC
Q psy573 16 KKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG------TNLAIQDSRK 89 (216)
Q Consensus 16 ~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~------~~l~i~~~~~ 89 (216)
+.|.+.. +|.+...+....+..|+.+.+.|.+..+.|.+.+.|++++..+... .......+ +.|.|.+...
T Consensus 110 ~~l~v~~-~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~s~l~i~~~~~ 186 (313)
T 4fqp_A 110 IWLRVLA-KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNT--SQVPGFLSGTVTVTSLWILVPSSQ 186 (313)
T ss_dssp EEECCBB-CCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEE--EEEECSSTTCEEEEEEEEECCCGG
T ss_pred eeeeecc-CCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccc--ceeeeecccccccceeeeeccccc
Confidence 3344333 3555556666677789999999987557788999999998766321 11111111 3588999999
Q ss_pred CCCceEEEEEEcCCCCc-ccceeEEEEeecceEEeC-CCceeEeCCCcEEEEEEeCCCCCc-EEEEeeCCccCCCCCeee
Q psy573 90 TDDGRYQCVVKNVAGTR-ESTDAVLRVLVKPYIIRG-PKDTTVSAGSIIVFECSVGGDAVL-TVHWKRLGSAMPEDRMSV 166 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~ 166 (216)
+|+|.|+|.+.+..+.. ....+.|.|..+|.+... .....+..|+.+.|.|.+.|.|.| .+.|++++..++... .
T Consensus 187 ~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~--~ 264 (313)
T 4fqp_A 187 VDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA--V 264 (313)
T ss_dssp GTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--E
T ss_pred ccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce--E
Confidence 99999999999876543 244566777778877543 344466678999999999999988 699999998876542 3
Q ss_pred ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 167 LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
..+++|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+.|.
T Consensus 265 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 265 AQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp EETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred EeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 3467899999999999999999999999999999999997664
No 64
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.94 E-value=2.4e-26 Score=162.65 Aligned_cols=173 Identities=23% Similarity=0.326 Sum_probs=124.4
Q ss_pred cccceEEecCCcEEEEeeCCCC---CCCCeeEEeeCCEEec----------------------------cccCceEEEec
Q psy573 30 QPKSQRVAAGDTALLECGPPRG---HPEPTLVWKKNGHPID----------------------------FENSKRLRLVD 78 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~---~~~~~~~W~~~~~~~~----------------------------~~~~~~~~~~~ 78 (216)
.+..+.+.+|+.++|.|.+ .+ .+.+.+.|++++.... ....++..+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSY-QLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEE-EECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred CCCceEEecCCeEEEEEEe-EcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 4446789999999999987 43 6788999999864310 11223333332
Q ss_pred --CcEEEEcccCCCCCceEEEEEEcCCCCcc----cceeEEEEeec---ceEEe-CCCceeEeCCCcEEEEEEeCCCCCc
Q psy573 79 --GTNLAIQDSRKTDDGRYQCVVKNVAGTRE----STDAVLRVLVK---PYIIR-GPKDTTVSAGSIIVFECSVGGDAVL 148 (216)
Q Consensus 79 --~~~l~i~~~~~~d~g~y~C~~~~~~~~~~----~~~~~l~v~~~---p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~ 148 (216)
+..|.|.+++.+|+|.|+|.+.+..+... ...+.|.|..+ |.+.. .+....+.+|+.+.|.|.+.+.|.|
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 35799999999999999999998765431 23567777654 23332 3344567789999999999999999
Q ss_pred EEEEeeCCccCCCC-------------------------CeeeecCCeEEEecCCCCCCeEEEEEEEcCCc---ceEEEE
Q psy573 149 TVHWKRLGSAMPED-------------------------RMSVLPSRSLQLSDVRLEDGGEYVCEAENAVG---KISASA 200 (216)
Q Consensus 149 ~i~W~~~~~~~~~~-------------------------~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~---~~~~~~ 200 (216)
.+.|++++..+... +........|.|.++..+|+|.|+|.|.|..| ....++
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 99999998766431 11111346899999999999999999999554 455555
Q ss_pred EEE
Q psy573 201 TLT 203 (216)
Q Consensus 201 ~l~ 203 (216)
.|.
T Consensus 247 ~l~ 249 (250)
T 2fbo_J 247 ILK 249 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 65
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.94 E-value=1e-25 Score=152.52 Aligned_cols=162 Identities=17% Similarity=0.247 Sum_probs=126.0
Q ss_pred ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecc------------ccCceEEEec------CcEEEEcccCCCCCce
Q psy573 33 SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDF------------ENSKRLRLVD------GTNLAIQDSRKTDDGR 94 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~------------~~~~~~~~~~------~~~l~i~~~~~~d~g~ 94 (216)
.+.+.+|+.++|.|.+ .+.+.+.+.|++++..... ....++.... ..+|.|.+++.+|+|.
T Consensus 4 ~v~~~~G~~v~L~C~~-~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp EEEEETTSCEEECCBC-SSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred cEEEeCCCCEEEEEEE-cCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 4678999999999998 6778889999998753211 1122333221 3359999999999999
Q ss_pred EEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEE
Q psy573 95 YQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQL 174 (216)
Q Consensus 95 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i 174 (216)
|+|.+.+..+ .+.|.|.. +.. +....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ......|.|
T Consensus 83 Y~C~~~~~~~-----~~~l~V~~---~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i 147 (184)
T 2ny1_B 83 YICEVEDQKE-----EVQLLVFG---LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSV 147 (184)
T ss_dssp EEEEETTEEE-----EEEEEEEE---EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE------EEESSEEEE
T ss_pred EEEEEEcCCC-----cEEEEEEE---ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------ccCceEEEE
Confidence 9999987532 34555553 222 34457889999999999988999999999987553 335678999
Q ss_pred ecCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 175 SDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 175 ~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.++..+|+|.|+|.+.|..+..+..+.|.|.+.|..
T Consensus 148 ~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 148 SQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred ecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 999999999999999999999999999999987753
No 66
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.94 E-value=9.6e-26 Score=164.83 Aligned_cols=188 Identities=21% Similarity=0.298 Sum_probs=137.9
Q ss_pred eeeEEeeccceEeccc---ceEEecCCcEEEEeeCC-----CCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccC
Q psy573 17 KLKIEMLREEFRVQPK---SQRVAAGDTALLECGPP-----RGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSR 88 (216)
Q Consensus 17 ~l~v~~~~~~~~~~~~---~~~~~~G~~~~l~C~~~-----~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 88 (216)
.+.+...+|.+...+. ...+.+|+.+.|.|.+. .+.|.+.+.|++++..+.... .++ ...++.|.|.+++
T Consensus 93 ~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~-~~~-~~~~~~L~i~~v~ 170 (315)
T 1itb_B 93 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN-IHF-SGVKDRLIVMNVA 170 (315)
T ss_dssp CCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS-SSE-EEETTEEEESSCC
T ss_pred EEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc-ceE-eecCceEEEEece
Confidence 3333334455443332 35788999999999862 577889999999999885422 223 3346689999999
Q ss_pred CCCCceEEEEEE-cCCCCccc--ceeEEEEe-----ecceEEeCCCc-eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC
Q psy573 89 KTDDGRYQCVVK-NVAGTRES--TDAVLRVL-----VKPYIIRGPKD-TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM 159 (216)
Q Consensus 89 ~~d~g~y~C~~~-~~~~~~~~--~~~~l~v~-----~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~ 159 (216)
.+|+|.|+|.+. +..+.... ..+.+.+. .+|.+...+.. ..+..|+.+.|.|.+.+.|.|.+.|++++..+
T Consensus 171 ~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i 250 (315)
T 1itb_B 171 EKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 250 (315)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEEC
T ss_pred ehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEEC
Confidence 999999999999 66665422 22333333 45666554443 46789999999999999999999999999887
Q ss_pred CCCCe------eee----------cCCeEEEecCCCCC-CeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 160 PEDRM------SVL----------PSRSLQLSDVRLED-GGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 160 ~~~~~------~~~----------~~~~l~i~~~~~~d-~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
..... ... ....|.|.++..+| +|.|+|.|.|..|....++.|.|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 64321 111 12379999999999 9999999999999999998888753
No 67
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.94 E-value=6.3e-26 Score=171.01 Aligned_cols=200 Identities=22% Similarity=0.377 Sum_probs=150.4
Q ss_pred HhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCC
Q psy573 12 EEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTD 91 (216)
Q Consensus 12 ~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 91 (216)
.+..+.|.|...+......+....+.+|+.+.|.|.+..+.|.+.+.|++++.... ....+.....++.|.|.++..+|
T Consensus 104 ~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~~~~~l~i~~v~~~d 182 (404)
T 3p3y_A 104 LSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPI-TQDKRVSQGHNGDLYFSNVMLQD 182 (404)
T ss_dssp EEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBC-CCCSSEEECTTSCEEESSCCSGG
T ss_pred eeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCcccc-CCCCcEEEcCCCcEEEEeeeecc
Confidence 34556677766544444455568899999999999976677889999999875432 23445555667789999999999
Q ss_pred -CceEEEEEEcCCCCcc--cceeEEEEeec-------ceEEeCC---CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCcc
Q psy573 92 -DGRYQCVVKNVAGTRE--STDAVLRVLVK-------PYIIRGP---KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSA 158 (216)
Q Consensus 92 -~g~y~C~~~~~~~~~~--~~~~~l~v~~~-------p~~~~~~---~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~ 158 (216)
+|.|+|.+.+..+... ...+.+.+... |.+.... ....+.+|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 183 ~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~ 262 (404)
T 3p3y_A 183 MQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGD 262 (404)
T ss_dssp GSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBC
T ss_pred CCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEE
Confidence 5999999998766432 22345555432 2222111 234678999999999999999999999999998
Q ss_pred CCCCCeeee-cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 159 MPEDRMSVL-PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 159 ~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
+........ ..+.|.|.++..+|+|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 263 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 317 (404)
T 3p3y_A 263 LPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLD 317 (404)
T ss_dssp CCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEE
T ss_pred CCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeec
Confidence 866544332 457899999999999999999999999999999999998876544
No 68
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=4.7e-25 Score=149.19 Aligned_cols=162 Identities=19% Similarity=0.310 Sum_probs=124.3
Q ss_pred eEEecCCcEEEEeeCCCCCCCC--eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCccccee
Q psy573 34 QRVAAGDTALLECGPPRGHPEP--TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDA 111 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 111 (216)
..+.+|+.++|.|.+ .+.+.+ .+.|++++..+...... .....|.|. +.+|+|.|+|.+.+. ....+
T Consensus 8 ~~v~~G~~v~l~C~~-~~~~~p~~~~~W~k~~~~l~~~~~~----~~~~~l~i~--~~~d~G~Y~C~~~n~----~~~~~ 76 (184)
T 3b5h_A 8 TVEDLGSKILLTCSL-NDSATEVTGHRWLKGGVVLKEDALP----GQKTEFKVD--SDDQWGEYSCVFLPE----PMGTA 76 (184)
T ss_dssp EEEEETTEEEEEEEE-ESCSSCCCEEEEESSSEEEECTTCC----CSEEEEEEC--GGGCCEEEEEEEEST----TSCEE
T ss_pred EEEecCCCEEEEEEC-CCCCCCceEEEEEeCCEEeeccccc----CCcEEEEEe--chhhCeEEEEEEECC----cCcEE
Confidence 467899999999997 454555 99999999887433211 112245555 689999999999972 23567
Q ss_pred EEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCC-CcEEEEee---CCcc-CCC---CCeeeec---CCeEEEecCC-C
Q psy573 112 VLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDA-VLTVHWKR---LGSA-MPE---DRMSVLP---SRSLQLSDVR-L 179 (216)
Q Consensus 112 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~---~~~~-~~~---~~~~~~~---~~~l~i~~~~-~ 179 (216)
.|.|..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++.. +.. .++.... ...|.|.++. .
T Consensus 77 ~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 77 NIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNME 156 (184)
T ss_dssp EEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTT
T ss_pred EEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccc
Confidence 88899999888777777889999999999999999 79999999 4433 321 2333322 2379999999 8
Q ss_pred CCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 180 EDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 180 ~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
+|.|.|+|.+.|..|.....+.|.|.+
T Consensus 157 ~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 157 ADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ccCceEEEEEEeCCCcceEEEEEEEec
Confidence 999999999999999988888888864
No 69
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.94 E-value=2.9e-25 Score=163.40 Aligned_cols=177 Identities=19% Similarity=0.232 Sum_probs=133.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCC-CCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHP-EPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+...+....+.+|+.+.|.|.+ .+.| .+.+.|++++..+.. ...++... ++.|.|.+++.+|+|.|+|.+.|.
T Consensus 128 ~p~~~~~~~~~~~~~G~~v~L~C~~-~g~p~~~~i~W~k~~~~l~~-~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~n~ 204 (329)
T 3oq3_B 128 PPSCIPETYELGTHDKYGIDLYCGI-LYAKHYNNITWYKNNQELII-DGTKYSQS-GQNLIIHNPELEDSGRYDCYVHYD 204 (329)
T ss_dssp CCSCEEEEEETTSSTTTCEEEECCC-CSCCCCCEEEEEETTEECCC-SSSSEEEE-TTEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCcEeccccceEEeCCCcEEEEecc-CCCCCCceEEEEECCccCCC-CCceEecC-CCEEEEeecChhhCEEEEEEEEec
Confidence 4444333333346679999999998 7778 899999999998842 23344434 688999999999999999999986
Q ss_pred --CCCc---ccceeEEEEeecc----eEEeCCCceeEeCCCcEEEEEEeCCCC---Cc-EEEEeeCCccC-CCCCe-eee
Q psy573 103 --AGTR---ESTDAVLRVLVKP----YIIRGPKDTTVSAGSIIVFECSVGGDA---VL-TVHWKRLGSAM-PEDRM-SVL 167 (216)
Q Consensus 103 --~~~~---~~~~~~l~v~~~p----~~~~~~~~~~~~~g~~~~l~C~~~~~p---~~-~i~W~~~~~~~-~~~~~-~~~ 167 (216)
.+.. ....+.|.|..+| .+. .+....+..|+.+.|.|.+.+.| .+ .+.|++++..+ ..... ...
T Consensus 205 ~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~ 283 (329)
T 3oq3_B 205 DVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSI 283 (329)
T ss_dssp CTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEE
T ss_pred ccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeee
Confidence 4332 1223667777665 344 56667889999999999999887 77 89999998874 32221 111
Q ss_pred -------cCCeEEEecCCCCCCe-EEEEEEEcCCcceEEEEEEEE
Q psy573 168 -------PSRSLQLSDVRLEDGG-EYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 168 -------~~~~l~i~~~~~~d~g-~y~C~~~n~~~~~~~~~~l~v 204 (216)
....|.|.++..+|.| .|+|.|.|..|....++.|.|
T Consensus 284 ~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 284 LTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred ecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 2467999999999999 999999999999988888776
No 70
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.94 E-value=9.2e-26 Score=169.08 Aligned_cols=199 Identities=23% Similarity=0.368 Sum_probs=147.7
Q ss_pred HhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCC
Q psy573 12 EEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKT 90 (216)
Q Consensus 12 ~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~ 90 (216)
.+..+.|.|...+......+....+.+|+.+.|.|.+..+.|.+.+.|++++..+......+.... .++.|.|.+++.+
T Consensus 89 ~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 168 (382)
T 1cs6_A 89 VSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEAS 168 (382)
T ss_dssp ECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGG
T ss_pred EecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcc
Confidence 345567777665333333455678999999999998645667889999999876533333333333 3468999999999
Q ss_pred CCceEEEEEEcCCCCcc----cceeEEEEe------ecceEEe-CCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC
Q psy573 91 DDGRYQCVVKNVAGTRE----STDAVLRVL------VKPYIIR-GPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM 159 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~----~~~~~l~v~------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~ 159 (216)
|+|.|+|.+.+..+... +....+.+. .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 169 d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~ 248 (382)
T 1cs6_A 169 DLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQ 248 (382)
T ss_dssp GCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCC
T ss_pred cCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccc
Confidence 99999999998664221 222344432 2455443 345678889999999999999999999999988775
Q ss_pred CCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 160 PEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 160 ~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
... .......|.|.++..+|.|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 249 ~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 299 (382)
T 1cs6_A 249 TSK--WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLD 299 (382)
T ss_dssp SCC--CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE
T ss_pred ccE--EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCccc
Confidence 431 223457899999999999999999999999998999999998887654
No 71
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.94 E-value=3.1e-25 Score=148.22 Aligned_cols=162 Identities=19% Similarity=0.337 Sum_probs=126.0
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCC-CCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHP-EPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
|.+...|....+.+|+.+.|.|.+ .+.+ .+.+.||+++..+... ...+.+.+++.+|+|.|+|.+.+..
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~-~~~p~~~~~~W~~~g~~~~~~---------~~~~~~~~~~~~d~G~Y~C~~~~~~ 74 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQG-ARSPESDSIQWFHNGNLIPTH---------TQPSYRFKANNNDSGEYTCQTGQTS 74 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEES-CCCSSSSCEEEEETTEECTTC---------CSSEEEEECCGGGCEEEEEEETTSB
T ss_pred CEEEeCCCCeEEECCCcEEEEEEe-cCCCCcceEEEEECCeEcccC---------ccceEEEecccccCeEEEEEEeCCC
Confidence 456667777789999999999998 5544 6799999999987432 2346778999999999999998643
Q ss_pred CCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCC
Q psy573 104 GTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDG 182 (216)
Q Consensus 104 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (216)
. +..+.|.|..++.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ......|.|.++..+|.
T Consensus 75 ~---s~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~----~~~~~~L~i~~v~~~d~ 146 (170)
T 3ry4_A 75 L---SDPVHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF----SHLDPTFSIPQANHSHS 146 (170)
T ss_dssp C---CCCEEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE----ESSCCEEEESSCCGGGC
T ss_pred c---eEeEEEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEccc----cCCCCeEEEEeccccCC
Confidence 2 345778888777555443 4578899999999999 4556789999999876531 22456799999999999
Q ss_pred eEEEEEEEcCCcc-eEEEEEEEE
Q psy573 183 GEYVCEAENAVGK-ISASATLTV 204 (216)
Q Consensus 183 g~y~C~~~n~~~~-~~~~~~l~v 204 (216)
|.|+|.+.|..|. .+..+.|.|
T Consensus 147 G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 147 GDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEEEeCcCccccccEEEEE
Confidence 9999999999987 555566655
No 72
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.94 E-value=3.1e-26 Score=157.24 Aligned_cols=178 Identities=17% Similarity=0.223 Sum_probs=124.3
Q ss_pred eEecccceE-EecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCCCCceEEEEEEcCCC
Q psy573 27 FRVQPKSQR-VAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKTDDGRYQCVVKNVAG 104 (216)
Q Consensus 27 ~~~~~~~~~-~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~ 104 (216)
+.+.|.... +.+|+.++|.|.+ .+.|.+.+.|++.... ......... .+..|.|.+++.+|+|.|.|.+.+..+
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~-~g~P~p~i~W~~~~~~---~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 78 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCST-TGCESPFFSWRTQIDS---PLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESR 78 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEE-ESCSSCEEEEEETTCC---CCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTE
T ss_pred EEECCCCcEEEcCCCcEEEEEee-cCCCCCeEEEECCCCC---CccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCc
Confidence 344555544 4599999999998 6788899999984211 011222222 345799999999999999999999766
Q ss_pred CcccceeEEEEeecceE-EeCCCceeEeCCCcEEEEEEeCCCCC---cEEEEeeCCccCCCCCee--------eecCCeE
Q psy573 105 TRESTDAVLRVLVKPYI-IRGPKDTTVSAGSIIVFECSVGGDAV---LTVHWKRLGSAMPEDRMS--------VLPSRSL 172 (216)
Q Consensus 105 ~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~~~~~~--------~~~~~~l 172 (216)
.. ...+.|.|..+|.. ...+. ..+.+|+.+.|.|.+.+.++ ++|.|++++..+...... ......|
T Consensus 79 ~~-~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l 156 (202)
T 1vca_A 79 KL-EKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEV 156 (202)
T ss_dssp EE-EEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEE
T ss_pred eE-eeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEE
Confidence 43 55678888776642 22222 56889999999999977543 479999999765321110 1112346
Q ss_pred EEecCCCCCCeEEEEEEEcCCcc-------eEEEEEEEEEeccee
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGK-------ISASATLTVQSKYLK 210 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~-------~~~~~~l~v~~~p~~ 210 (216)
.|.....+|+|.|+|.|.|..+. ...++.|.|..+|.-
T Consensus 157 ~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~~ 201 (202)
T 1vca_A 157 TFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPKN 201 (202)
T ss_dssp EECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC--
T ss_pred EEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCCC
Confidence 77888888899999999998775 456788888888753
No 73
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=9.1e-26 Score=166.23 Aligned_cols=177 Identities=32% Similarity=0.497 Sum_probs=134.6
Q ss_pred ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCc-eEE-EecCcEEEEcccCCCCCceEEEEEEcCCCCcccce
Q psy573 33 SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSK-RLR-LVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTD 110 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 110 (216)
...+.+|+.+.|.|.+ .+.|.+.+.|++++..+...... ... ......|.|.+++.+|+|.|+|.+.+..+.. ...
T Consensus 132 ~~~v~~g~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~ 209 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSI-RQT 209 (334)
T ss_dssp EEEEETTCCEEEECCC-CCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEE-EEE
T ss_pred eEEecCCCcEEEEEEc-cCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCE-EEE
Confidence 4678899999999998 77888999999999877432211 111 1234589999999999999999999987654 445
Q ss_pred eEEEEeec----ceEEe-CCCceeEeCCCcEEEEEEeCCCCCcEEEEee----CCccCCCCCe---eee----------c
Q psy573 111 AVLRVLVK----PYIIR-GPKDTTVSAGSIIVFECSVGGDAVLTVHWKR----LGSAMPEDRM---SVL----------P 168 (216)
Q Consensus 111 ~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~~---~~~----------~ 168 (216)
+.|.|... |.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+..... ... .
T Consensus 210 ~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (334)
T 1ry7_B 210 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKE 289 (334)
T ss_dssp EEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTT
T ss_pred EEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccc
Confidence 67777652 22222 3456688899999999999999999999999 5655532211 111 1
Q ss_pred CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceee
Q psy573 169 SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
...|.|.++..+|+|.|+|.|.|..|....++.|.|...|...
T Consensus 290 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 290 LEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEEL 332 (334)
T ss_dssp CCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC-
T ss_pred ccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCCc
Confidence 1379999999999999999999999999999999999877544
No 74
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.94 E-value=3.2e-27 Score=175.00 Aligned_cols=178 Identities=19% Similarity=0.217 Sum_probs=141.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc-eEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG-RYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~ 102 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... ......++.|.|.+++.+|+| .|+|.+.+.
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~-~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~ 235 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQV-EGRGLEQAGWILTELEQSATVM-KSGGLPSLGLTLANVTSDLNRKNVTCWAEND 235 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEE-ECSSCCCCCEEESCCCSSEEEC-CCCCSSEEEEEEESCCSTTTTCCEEECCEET
T ss_pred CCceeccCCceEEeCCCcEEEEEEE-ecCCCCEEEEEcCCceeecccc-cceecccceEEEeeCChHHCCCeEEEEEEcC
Confidence 5778888888899999999999998 7888899999998865422111 111223467999999999999 999999998
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeee-----------cCCe
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVL-----------PSRS 171 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~-----------~~~~ 171 (216)
.+.. ...+.+.|..+|.+ .......|+.+.|.|.+.|.|.|.+.|++++..+........ ..++
T Consensus 236 ~g~~-~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (347)
T 2ifg_A 236 VGRA-EVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGC 310 (347)
T ss_dssp TEEC-CEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEE
T ss_pred CCCE-EEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceE
Confidence 7665 45667777777775 112345789999999999999999999999988775433221 1356
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 172 LQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 311 L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 311 LRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred EEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 9999999999999999999999999999999887765
No 75
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.94 E-value=1.2e-25 Score=174.93 Aligned_cols=196 Identities=18% Similarity=0.262 Sum_probs=150.7
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEee-CCEEeccccCceEEEecCcEEEEcccCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKK-NGHPIDFENSKRLRLVDGTNLAIQDSRKTD 91 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 91 (216)
+..+.|.|... +.+...+....+.+|+.+.|.|.+ .+.+.+.+.||+ ++..+ ....++....++.|.|.+++.+|
T Consensus 104 ~~~~~l~V~~p-~~~~~~~~~~~v~~G~~v~l~C~~-~~~~~~~v~W~~~~g~~l--~~~~~~~~~~~~~L~i~~~~~~d 179 (524)
T 2ec8_A 104 SNSIYVFVRDP-AKLFLVDRSLYGKEDNDTLVRCPL-TDPEVTNYSLKGCQGKPL--PKDLRFIPDPKAGIMIKSVKRAY 179 (524)
T ss_dssp EEEEEEECCCS-SCSBCCCCCCCEETTSCEEECCCB-SCCCCSCEEEECSSSCCC--CSSCEEEEETTTEEEEESCCGGG
T ss_pred ceEEEEEECCC-CcccccccceEEEcCCeEEEECcC-CCCccceEEEEccCCcCc--CCCCceeECCCccEEEeccchhh
Confidence 44555665543 444466777889999999999998 565668999998 77666 33455666677899999999999
Q ss_pred Cc-eEEEEEEcCCCCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcE-EEEeeCCccC--CCCC
Q psy573 92 DG-RYQCVVKNVAGTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLT-VHWKRLGSAM--PEDR 163 (216)
Q Consensus 92 ~g-~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~--~~~~ 163 (216)
+| .|+|.+.+..+...+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+ ....
T Consensus 180 ~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~ 259 (524)
T 2ec8_A 180 HRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKY 259 (524)
T ss_dssp TTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEE
T ss_pred CCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccccc
Confidence 99 99999998766554556777776 677887777778899999999999999888876 9999999873 2211
Q ss_pred e-------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 164 M-------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 164 ~-------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
. .....+.|.|.++..+|+|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 260 ~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 315 (524)
T 2ec8_A 260 NSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINI 315 (524)
T ss_dssp EEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEE
T ss_pred ccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEe
Confidence 1 122346799999999999999999999999988899999988776543
No 76
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.94 E-value=8.2e-26 Score=155.15 Aligned_cols=171 Identities=18% Similarity=0.207 Sum_probs=121.0
Q ss_pred cccceEEecCCcEEEEeeCCCCCCC-----CeeEEeeCCEEeccccCceEEEec------CcEEEEcccCCCCCceEEEE
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPE-----PTLVWKKNGHPIDFENSKRLRLVD------GTNLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~-----~~~~W~~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~ 98 (216)
.+..+.+.+|+.+.|.|.+ .+.+. +.+.|++.+.... ...++..+.. +.+|.|.+++.+|+|.|+|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~-~~~p~~~~~~~~v~W~k~~~~~~-~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDF-DRRECTELEGIRASLQKVENDTS-LQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85 (202)
T ss_dssp SCSEEEEETTSCEEEEEEE-CTTC---CTTEEEEEEECC--CC-CBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEe-cCCCCCCccceEEEEEcCCCccc-ccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEE
Confidence 3445789999999999998 56554 7899999443331 2223333332 25799999999999999999
Q ss_pred EEcCCCCcccceeEEEEeecc---eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecC---CeE
Q psy573 99 VKNVAGTRESTDAVLRVLVKP---YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPS---RSL 172 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~---~~l 172 (216)
+.+..+.. ...+.|.|..++ .+.. ..+..|+.+.|.|.+.+.|.|.+.|++++..+... ...... ..+
T Consensus 86 ~~~~~~~~-~~~~~l~V~~~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~-~~~~~~~~~~~~ 159 (202)
T 3bp6_B 86 VICGAAWD-YKYLTVKVKASYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS-HIRTPEGLYQVT 159 (202)
T ss_dssp EEETTEEE-EEEEEEEEEBCCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE-EEECTTSCEEEE
T ss_pred EEeCCCcc-eEEEEEEecCCCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccCc-eeeCCCCCEEEE
Confidence 99876644 456677776543 2211 24457999999999999999999999988754321 111122 235
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
.+..+..+|.|.|+|.+.|..|.....+.|.|.++.
T Consensus 160 ~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 160 SVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEEEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 667888999999999999999999888888876554
No 77
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.94 E-value=1.4e-25 Score=150.65 Aligned_cols=160 Identities=18% Similarity=0.201 Sum_probs=118.4
Q ss_pred ceEEecCCcEEEEeeC-CCCCCCCeeEEeeCCEEec--------cccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 33 SQRVAAGDTALLECGP-PRGHPEPTLVWKKNGHPID--------FENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~-~~~~~~~~~~W~~~~~~~~--------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
.+.+.+|++++|.|.. ....+.+.+.|++++..+. .....++.+..+++|.|.+++.+|+|.|.|.+.+..
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 3578899999999953 1225567899999987552 123456666667789999999999999999999987
Q ss_pred CCc-ccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCC
Q psy573 104 GTR-ESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDG 182 (216)
Q Consensus 104 ~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (216)
+.. ....+.|.|..++. .......+..+.|.|.+.+.|.|.+.|++++..+... ..+.|..+..+|.
T Consensus 85 g~~~~~~~~~l~V~~~~~-----~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~-------~~~~i~~~~~~d~ 152 (176)
T 1hng_A 85 GTRILNKALDLRILEMVS-----KPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSL-------RQKTMSYQWTNLR 152 (176)
T ss_dssp CCEEEEEEEEEEEECCCC-----CCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEE-------SSSEEEEECSCCS
T ss_pred CCEEEEEEEEEEEeCCCC-----CCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCC-------CcEEEEEEEccCC
Confidence 764 34456666665321 1112223456899999999999999999998765321 2255667889999
Q ss_pred eEEEEEEEcCCcceEEEEEEEE
Q psy573 183 GEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v 204 (216)
|.|+|.|.|..|.......|.+
T Consensus 153 G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 153 APFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SCEEEEEEETTEEEEEEECCCC
T ss_pred eEEEEEEEecCCCceecccccC
Confidence 9999999999999887766543
No 78
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=1.7e-25 Score=157.51 Aligned_cols=180 Identities=16% Similarity=0.163 Sum_probs=127.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|.. .+.+|++++|.|.+ .. +...+.|||++..+............+..|.|.+++.+|+|.|+|.+.+..
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 83 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 83 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEee-CC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCC
Confidence 4566667766 88999999999997 33 456899999998763211110011224579999999999999999998753
Q ss_pred CC-cccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCC
Q psy573 104 GT-RESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRL 179 (216)
Q Consensus 104 ~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (216)
+. ..+..+.|.|.. .|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|+|++..+............|.|.+++.
T Consensus 84 ~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~ 161 (242)
T 1p6f_A 84 LWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTT 161 (242)
T ss_dssp EECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEECCG
T ss_pred ccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCCcc
Confidence 32 224456777764 45555444 3468899999999998754 468999999976643211122346799999999
Q ss_pred CCCeEEEEEEEcCC---cceEEEEEEEEEecc
Q psy573 180 EDGGEYVCEAENAV---GKISASATLTVQSKY 208 (216)
Q Consensus 180 ~d~g~y~C~~~n~~---~~~~~~~~l~v~~~p 208 (216)
+|+|.|+|.+.|.. ...+..+.|.|.+.+
T Consensus 162 ~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 162 AHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp GGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred ccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 99999999999864 235567778887643
No 79
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.94 E-value=4.4e-26 Score=157.70 Aligned_cols=174 Identities=14% Similarity=0.265 Sum_probs=126.5
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEec----------cccCceEEE---ecCcEEEEcccCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPID----------FENSKRLRL---VDGTNLAIQDSRKT 90 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~~----------~~~~~~~~~---~~~~~l~i~~~~~~ 90 (216)
.+...+ .+.+.+|+.++|.|.+ .+.+.+.+.||+. +.... .....++.. ..+.+|.|.+++.+
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSG-DKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEEC-SSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEc-CCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 344445 7889999999999998 6778899999983 21110 002233332 23457999999999
Q ss_pred CCceEEEEEEcCCC--CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccCCCC
Q psy573 91 DDGRYQCVVKNVAG--TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAMPED 162 (216)
Q Consensus 91 d~g~y~C~~~~~~~--~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~ 162 (216)
|+|.|.|.+.+..+ ........|.|. .+|.+...+....+..|+.+.|.|.+.+. |. +.+.|++++..+...
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQG 160 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCC
Confidence 99999999998776 233556678887 66777666655556689999999999875 33 489999999877542
Q ss_pred C---------eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 163 R---------MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 163 ~---------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
. ......+.|.|..+..+|.|.|+|.|.|..+...+++.
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 161 VKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred cccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 1 11112245889999999999999999999877766654
No 80
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.94 E-value=3.9e-25 Score=180.28 Aligned_cols=194 Identities=22% Similarity=0.378 Sum_probs=148.3
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec--CcEEEEcccCCCC
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD--GTNLAIQDSRKTD 91 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d 91 (216)
..+.+.|...|......+....+.+|+.++|.|.+..+.+.+.+.|++++..+............ .+.|.|.++..+|
T Consensus 609 ~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d 688 (816)
T 3dmk_A 609 GSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASH 688 (816)
T ss_dssp EEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGG
T ss_pred eeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhh
Confidence 34555555543333334455678999999999998444455599999999887433332222222 3579999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-------Ce
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-------RM 164 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-------~~ 164 (216)
+|.|+|.+.|..+.. ...+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..++.. ..
T Consensus 689 ~G~Y~C~a~N~~g~~-~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~ 767 (816)
T 3dmk_A 689 AGNFTCHARNLAGHQ-QFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDN 767 (816)
T ss_dssp CEEEEEEEECSSCEE-EEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTT
T ss_pred CEEEEEEEEeCCccE-EEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCC
Confidence 999999999988765 5567888999999888888889999999999999999999999999987654322 11
Q ss_pred eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 165 SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 165 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
....+++|.|.++..+|+|.|+|.|.|..|....++.+..+..+
T Consensus 768 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~~~ 811 (816)
T 3dmk_A 768 IRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAH 811 (816)
T ss_dssp EEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEEEC-
T ss_pred EEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEeecc
Confidence 22245689999999999999999999999998888877666443
No 81
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.93 E-value=2.2e-24 Score=171.64 Aligned_cols=180 Identities=21% Similarity=0.373 Sum_probs=142.1
Q ss_pred ceeeEEeecc-ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCCCCc
Q psy573 16 KKLKIEMLRE-EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKTDDG 93 (216)
Q Consensus 16 ~~l~v~~~~~-~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g 93 (216)
+.+.|...++ .....+....+.+|+.+.|.|.+ . .+.+.+.|++++..+.. ..++... +++.|.|.++..+|+|
T Consensus 458 ~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~-~-~~~~~i~W~~~g~~l~~--~~~~~~~~~~~~L~i~~v~~~d~G 533 (642)
T 1e07_A 458 KTITVSAELPKPSISSNNSKPVEDKDAVAFTCEP-E-AQNTTYLWWVNGQSLPV--SPRLQLSNGNRTLTLFNVTRNDAR 533 (642)
T ss_pred EEEEEeccCCCceEecCCceeecCCCeEEEEEEC-C-CCCcEEEEEECCEeCCC--CCcEEEcCCCcEEEEeecChhcCc
Confidence 4455544322 22223445678899999999998 4 47889999999998743 3334333 3568999999999999
Q ss_pred eEEEEEEcCCCCcccceeEEEEeecce-EEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeE
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLVKPY-IIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSL 172 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l 172 (216)
.|+|.+.|..|...+..+.|.|..+|. +...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ...|
T Consensus 534 ~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~-------~~~L 606 (642)
T 1e07_A 534 AYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH-------TQVL 606 (642)
T ss_pred eEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc-------CceE
Confidence 999999998876555567888886654 45556677889999999999999999999999999987653 3579
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
.|.++..+|.|.|+|.|.|..|....++.|.|..
T Consensus 607 ~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 607 FIAKITPNNNGTYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred EECcccccCCeEEEEEEEecccCcceeEEEEEEE
Confidence 9999999999999999999999988888777764
No 82
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.93 E-value=5.2e-25 Score=153.20 Aligned_cols=177 Identities=16% Similarity=0.215 Sum_probs=120.0
Q ss_pred cccceEEecCCcEEEEeeCCCCCC-----CCeeEEeeCCEEecc-------------ccCceEEEec------CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP-----EPTLVWKKNGHPIDF-------------ENSKRLRLVD------GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~-----~~~~~W~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~ 85 (216)
.+..+.+.+|+.+.|.|.+ .+.| ...+.|++++..+.. ...++..+.. +.+|.|.
T Consensus 7 p~~~v~~~~G~~v~L~C~~-~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKF-PVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp SCSEEEEETTSCEEEEEEC-CCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred CCccEEEEcCCcEEEEeEe-cCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3445688999999999997 4444 348999997643311 1123444432 2479999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeC-CccCCCCCe
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRL-GSAMPEDRM 164 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~-~~~~~~~~~ 164 (216)
+++.+|+|.|+|.+.+ .+. ....+.|.|..++..........+..|+.+.|.|.+.+.|.|.+.|+++ +..+.....
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGA-DYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSE-EEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE
T ss_pred CcccccCeEEEEEEEe-CCC-ceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc
Confidence 9999999999999998 333 3445677777654322111112566899999999999999999999998 444433211
Q ss_pred e-e--ecCCeEE---EecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 165 S-V--LPSRSLQ---LSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 165 ~-~--~~~~~l~---i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
. . ...+.+. +..+..+|.|.|+|.|.|..|.....+.|.|.+.|.
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 1 1 1122222 224557899999999999999999999999887664
No 83
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.93 E-value=3.3e-24 Score=152.66 Aligned_cols=165 Identities=19% Similarity=0.281 Sum_probs=134.3
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
|.+...|....+.+|+.+.|.|.+ .+.+.+ .+.|++++..+.. .+..|.|.+++.+|+|.|+|.+.+..
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~-~~~~~~~~~~W~~~g~~~~~---------~~~~l~i~~~~~~d~G~Y~C~~~~~~ 71 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEV-LHLPGSSSTQWFLNGTATQT---------STPSYRITSASVNDSGEYRCQRGLSG 71 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEEC-SSCCCTTCEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEESSSC
T ss_pred CeEecCCCcEEeeCCCeEEEEEEC-CCCCCCceEEEEECCEEeec---------cCCeEEEecCCcccCeEEEEEEecCC
Confidence 667788888899999999999998 666666 9999999988732 14679999999999999999998754
Q ss_pred CCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCC
Q psy573 104 GTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDG 182 (216)
Q Consensus 104 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (216)
+ +..+.+.|..++... .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ......|.|.++..+|.
T Consensus 72 ~---s~~~~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~----~~~~~~l~i~~~~~~d~ 143 (262)
T 3rjd_A 72 R---SDPIQLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF----FHWNSNLTILKTNISHN 143 (262)
T ss_dssp C---CCCEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGGC
T ss_pred c---cccEEEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc----cCCCCeEEEEECChhhC
Confidence 3 335677777666443 3345678899999999999 6778889999999877532 12357799999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEec
Q psy573 183 GEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
|.|+|.+.|..+..+..+.|.|...
T Consensus 144 G~Y~C~~~n~~~~~~~~~~l~V~~~ 168 (262)
T 3rjd_A 144 GTYHCSGMGKHRYTSAGISVTVKEL 168 (262)
T ss_dssp EEEEEEEESSSEEEEECEEEEEECS
T ss_pred EEEEEEEeCCCCccccceEEEeccC
Confidence 9999999999988888888888853
No 84
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.93 E-value=1e-24 Score=155.92 Aligned_cols=178 Identities=24% Similarity=0.358 Sum_probs=123.9
Q ss_pred cceEecccceEEecCCcEEEEeeCCC--CCCCCeeEEeeCCEEe----------------ccccCceEEEec-----CcE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPR--GHPEPTLVWKKNGHPI----------------DFENSKRLRLVD-----GTN 81 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~--~~~~~~~~W~~~~~~~----------------~~~~~~~~~~~~-----~~~ 81 (216)
+.+...+..+.+.+|+.+.|.|.+.. +.+.+.+.|++++... ......+..+.. +.+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 45666777789999999999999821 4566789999965321 011124444322 267
Q ss_pred EEEcccCCCCCceEEEEEEcCCCCc-ccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe---CCCCCcEEEEeeCCc
Q psy573 82 LAIQDSRKTDDGRYQCVVKNVAGTR-ESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV---GGDAVLTVHWKRLGS 157 (216)
Q Consensus 82 l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~i~W~~~~~ 157 (216)
|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|.. ..+....+.+|+.+.|.|.+ .+.|.+.+.|++++.
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~ 160 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSG 160 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECT
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCC
Confidence 9999999999999999999865432 23334444431 23456688899999999999 677899999999543
Q ss_pred cCCCC-----------------------Ceee-----ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 158 AMPED-----------------------RMSV-----LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 158 ~~~~~-----------------------~~~~-----~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
..... +... .....|.|.++..+|+|.|+|.+.|..|.....+.|.|...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 161 SHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp TCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 21110 1111 23467999999999999999999999999999999998543
No 85
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.93 E-value=1.7e-25 Score=165.10 Aligned_cols=182 Identities=21% Similarity=0.289 Sum_probs=140.3
Q ss_pred eccceEecccceEEecCCcEEEEeeCCC-------CCCCCeeEEeeCCEEec--cccCceEEEecCcEEEEcccCCCCCc
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPR-------GHPEPTLVWKKNGHPID--FENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~-------~~~~~~~~W~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..|.+...+....+.+|+.+.|.|.+ . +.|.+.+.|++++..+. .....++. ..++.|.|.+++.+|+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G 94 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQ-VPYWLWASVSPRINLTWHKNDSARTVPGEEETRMW-AQDGALWLLPALQEDSG 94 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTT-SCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEE-EETTEEEESSBCTTCCE
T ss_pred hhHhhCcCceEEEEECCccEEEEecc-ccccccccCCCCceEEEEECCCCcccCccccccEE-eeCCeEEECCCCcccCE
Confidence 35788889999999999999999998 4 77888999999988742 22233443 44678999999999999
Q ss_pred eEEEEEEcCCCCcccceeEEEEeecceEE--eCCCceeEeCCCcEEEEEE-----eCCCCCcEEEEeeCCccCCCC--Ce
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLVKPYII--RGPKDTTVSAGSIIVFECS-----VGGDAVLTVHWKRLGSAMPED--RM 164 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~-----~~~~p~~~i~W~~~~~~~~~~--~~ 164 (216)
.|+|.+.+..+.. ...+.|.|...+... .......+..|+.+.|.|. +.+.|.+.+.|++++..+... +.
T Consensus 95 ~Y~C~~~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 95 TYVCTTRNASYCD-KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EEECCEEETTEEE-EEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEEECCcceE-EEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 9999999876643 456677776654321 1122347789999999999 788889999999999887654 33
Q ss_pred eeecC-CeEEEecCCCCCCeEEEEEEEcCCc----ceEEEEEEEEEec
Q psy573 165 SVLPS-RSLQLSDVRLEDGGEYVCEAENAVG----KISASATLTVQSK 207 (216)
Q Consensus 165 ~~~~~-~~l~i~~~~~~d~g~y~C~~~n~~~----~~~~~~~l~v~~~ 207 (216)
..... +.|.|.++..+|.|.|+|.+.|..| .....+.|.|...
T Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~ 221 (339)
T 3o4o_C 174 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKK 221 (339)
T ss_dssp EECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECC
T ss_pred EEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcC
Confidence 33322 5799999999999999999999887 4566788888753
No 86
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=168.52 Aligned_cols=196 Identities=14% Similarity=0.207 Sum_probs=140.1
Q ss_pred hhceeeEEeeccc-eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCc--eEEEecCcEEEEcccCCC
Q psy573 14 EKKKLKIEMLREE-FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSK--RLRLVDGTNLAIQDSRKT 90 (216)
Q Consensus 14 ~~~~l~v~~~~~~-~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~ 90 (216)
..+.+.+...++. +...+.......|+.+.|.|.+..+.|.+.+.|++++..+...... .......+.|.|.++..+
T Consensus 103 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~ 182 (308)
T 4fom_A 103 SSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFA 182 (308)
T ss_dssp EEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGG
T ss_pred eeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeec
Confidence 3344555444332 2334445556678999999986467889999999998766321100 000011236999999999
Q ss_pred CCceEEEEEEcCCCCc-ccceeEEEEeecceEEeCCC-ceeEeCCCcEEEEEEeCCCCCc-EEEEeeCCccCCCCCeeee
Q psy573 91 DDGRYQCVVKNVAGTR-ESTDAVLRVLVKPYIIRGPK-DTTVSAGSIIVFECSVGGDAVL-TVHWKRLGSAMPEDRMSVL 167 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~ 167 (216)
|+|.|+|.+.+..+.. ....+.|.|..+|.+...+. ...+..|+.+.|.|.+.+.|.| .+.|++++..++... ...
T Consensus 183 d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~-~~~ 261 (308)
T 4fom_A 183 RGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL-LAS 261 (308)
T ss_dssp TTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC-BCS
T ss_pred CCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcE-EEc
Confidence 9999999999876543 23455667777887754443 3466678999999999999988 699999998776442 222
Q ss_pred cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 168 PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
....+.|.++..+|+|.|+|.|.|..|..+.++.|.|.++|..
T Consensus 262 ~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~~ 304 (308)
T 4fom_A 262 DNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPHH 304 (308)
T ss_dssp TTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC--
T ss_pred CCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCCC
Confidence 3345667899999999999999999999999999999998864
No 87
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.93 E-value=1.6e-25 Score=165.87 Aligned_cols=196 Identities=19% Similarity=0.296 Sum_probs=109.3
Q ss_pred hceeeEEeeccceE---ecccceEEecCCcEEEEeeCC----CCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEccc
Q psy573 15 KKKLKIEMLREEFR---VQPKSQRVAAGDTALLECGPP----RGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDS 87 (216)
Q Consensus 15 ~~~l~v~~~~~~~~---~~~~~~~~~~G~~~~l~C~~~----~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 87 (216)
.+.|.|...+..+. ..+....+.+|+.+.|.|.+. .+.|.+.+.||+++..+... ..+ ...+..|.|.++
T Consensus 108 ~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~--~~~-~~~~~~L~i~~v 184 (349)
T 4dep_C 108 AFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF--NNV-IPEGMNLSFLIA 184 (349)
T ss_dssp EEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC--SSE-EEETTEEEEESC
T ss_pred EEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc--cce-eecCCEEEEeee
Confidence 34566655332221 224456788999999999731 45788999999999987332 222 233468999999
Q ss_pred CCCCCceEEEEEEcCC-CCc--ccceeEEEEee------cceEEeCCCce--eEeCCCcEEEEEEeC----CCCCcEEEE
Q psy573 88 RKTDDGRYQCVVKNVA-GTR--ESTDAVLRVLV------KPYIIRGPKDT--TVSAGSIIVFECSVG----GDAVLTVHW 152 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~-~~~--~~~~~~l~v~~------~p~~~~~~~~~--~~~~g~~~~l~C~~~----~~p~~~i~W 152 (216)
+.+|+|.|+|.+.+.. +.. ....+.|.|.. +|.+....... .+..|+.+.|.|.+. +.|.+.+.|
T Consensus 185 ~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W 264 (349)
T 4dep_C 185 LISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWW 264 (349)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEE
T ss_pred eecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEE
Confidence 9999999999999875 332 24455666655 45554444332 678899999999997 568899999
Q ss_pred eeCCccCCC--CCeee------------ecCCeEEEecCCCCCC-eEEEEEEEcCCcceEEEEEEEEEe-cceeeec
Q psy573 153 KRLGSAMPE--DRMSV------------LPSRSLQLSDVRLEDG-GEYVCEAENAVGKISASATLTVQS-KYLKVIH 213 (216)
Q Consensus 153 ~~~~~~~~~--~~~~~------------~~~~~l~i~~~~~~d~-g~y~C~~~n~~~~~~~~~~l~v~~-~p~~~~~ 213 (216)
++++..+.. .+... .....|.|.++..+|. |.|+|.|.|..|.....+.|.|.. +|.+...
T Consensus 265 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~~~p~~~~~ 341 (349)
T 4dep_C 265 TIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVE 341 (349)
T ss_dssp ESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-------------
T ss_pred EECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeecCCCCCceE
Confidence 999987654 11111 0123499999999999 999999999999999999999886 3444443
No 88
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.93 E-value=2.4e-25 Score=154.01 Aligned_cols=173 Identities=19% Similarity=0.205 Sum_probs=122.6
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE--Ee----------ccccCceEEEec---CcEEEEcccCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH--PI----------DFENSKRLRLVD---GTNLAIQDSRKTD 91 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~--~~----------~~~~~~~~~~~~---~~~l~i~~~~~~d 91 (216)
+...|..+.+.+|+.+.|.|.+ .+.+.+.+.||+++. .. ......++.... ...|.|.+++.+|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRA-SQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEeCCccEEEeCCCcEEEEEEC-CCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence 4445677889999999999998 677778999998531 11 111123444332 2379999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeCCccCCCC-Cee
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRLGSAMPED-RMS 165 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~-~~~ 165 (216)
+|.|.|.+.+..+........|.|.. +|.+...+.......|+.+.|.|.+.+ .|.+ .+.|++++..+... ...
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 162 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 162 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEE
T ss_pred CEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeec
Confidence 99999999987664334445667764 566655444444457889999999977 5554 89999999876544 111
Q ss_pred e----------ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 166 V----------LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 166 ~----------~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
. ...+.|.|.++..+|.|.|+|.|.|.........
T Consensus 163 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3d9a_L 163 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK 207 (213)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEE
T ss_pred CCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEE
Confidence 1 1123799999999999999999999887643333
No 89
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.93 E-value=3.6e-25 Score=161.79 Aligned_cols=173 Identities=17% Similarity=0.291 Sum_probs=127.9
Q ss_pred ceEEecCCcEEEEeeCCCC----------CCCCeeEEeeCCEEeccccCceEEEecC-cEEEEcccCCCCCceEEEEEEc
Q psy573 33 SQRVAAGDTALLECGPPRG----------HPEPTLVWKKNGHPIDFENSKRLRLVDG-TNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~----------~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
...+.+|+.+.|.|.+ .+ .|.+.+.|++++..+............+ ..|.|.+++.+|+|.|+|.+.+
T Consensus 107 ~~~~~~g~~~~l~c~~-~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 185 (317)
T 2y25_A 107 KKIALSATDLKIQSTA-EGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFD 185 (317)
T ss_dssp HHHHTCBCCCEEEECS-SEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEEC
T ss_pred ceecccCCCeEEEeec-cccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEe
Confidence 3445677888888876 44 6888999999998874332222221211 3599999999999999999999
Q ss_pred CCCCcccceeEEEEee--------------------cceEE-eCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC
Q psy573 102 VAGTRESTDAVLRVLV--------------------KPYII-RGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP 160 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~--------------------~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~ 160 (216)
..+.. ...+.+.+.. .|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 186 ~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~ 264 (317)
T 2y25_A 186 GKTGH-QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALA 264 (317)
T ss_dssp SSCEE-EEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEEC
T ss_pred CCceE-EEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCC
Confidence 77654 3344444321 23333 33455688899999999999999999999999998876
Q ss_pred CCC-eeeecC-C---eEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 161 EDR-MSVLPS-R---SLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 161 ~~~-~~~~~~-~---~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
... ...... + .|.|.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 265 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 265 SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp CCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 543 233221 2 7999999999999999999999999999999988743
No 90
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.93 E-value=3.6e-25 Score=154.05 Aligned_cols=177 Identities=24% Similarity=0.359 Sum_probs=120.4
Q ss_pred cceEEecCCcEEEEeeCCCCCCC-----CeeEEeeCCEEe-----------ccccCceEEEec------CcEEEEcccCC
Q psy573 32 KSQRVAAGDTALLECGPPRGHPE-----PTLVWKKNGHPI-----------DFENSKRLRLVD------GTNLAIQDSRK 89 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~-----~~~~W~~~~~~~-----------~~~~~~~~~~~~------~~~l~i~~~~~ 89 (216)
.++.+.+|++++|.|.+ .+.+. +.+.|++++... ......+..+.. +.+|.|.+++.
T Consensus 3 ~~v~~~~G~~v~L~C~~-~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSF-SPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCCTTSCEEECCBC-CCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG
T ss_pred CCEEEECCCCeEEEEEe-cCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc
Confidence 34567899999999998 44432 689999976332 112234444433 46799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec---ceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeC-CccCCCCCe
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK---PYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRL-GSAMPEDRM 164 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~-~~~~~~~~~ 164 (216)
+|+|.|+|.+.+.... ...+.|.|..+ |.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|+++ +..+.....
T Consensus 82 ~D~G~Y~C~~~~~~~~--~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~ 158 (222)
T 4i0k_A 82 TDEGSYTCFVSIQDFD--SAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT 158 (222)
T ss_dssp GGCSCEEEEEEECCCC--CCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE
T ss_pred ccCEEEEEEEEeCCCc--eEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc
Confidence 9999999999975322 33455555543 4444433 3467789999999999 7889999999994 444432211
Q ss_pred -ee--ecCC---eEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 165 -SV--LPSR---SLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 165 -~~--~~~~---~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
.. ...+ .|.|.++..+|.|.|+|.+.|..|....++.|.|.++|....
T Consensus 159 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 159 TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFP 212 (222)
T ss_dssp EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC------
T ss_pred eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccC
Confidence 11 1222 378899999999999999999999999999999998875443
No 91
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.6e-24 Score=146.68 Aligned_cols=161 Identities=22% Similarity=0.361 Sum_probs=115.7
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccc----------------cCceEEEecCcEEEEcccCCCCCc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFE----------------NSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~----------------~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
.|..+.+.+|++++|.|.+....+.+.+.|++++..+... ..+++.+..+++|.|.+++.+|+|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCc
Confidence 4566789999999999998333455799999987654210 113555556788999999999999
Q ss_pred eEEEEEEcCCCCcccceeEEEEeecc---eEEeCCCceeEeCCC-cEEEEEEeCCC-CCcEEEEeeCCccCCCCCeeeec
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLVKP---YIIRGPKDTTVSAGS-IIVFECSVGGD-AVLTVHWKRLGSAMPEDRMSVLP 168 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~~~~ 168 (216)
.|.|.+.+..+.. ...+.|.|..++ .+.... .....|. .+.|.|.+.+. |.+.+.|++++..+. .
T Consensus 84 ~Y~C~~~~~~~~~-~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~-------~ 153 (193)
T 2if7_A 84 SYRAQISTKTSAK-LSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLS-------S 153 (193)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEE-------S
T ss_pred eEEEEEEecCCCe-EEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcC-------C
Confidence 9999999877654 336677776543 333322 1233455 79999999885 588999999886542 3
Q ss_pred CCeEEEecCCCC-CCeEEEEEEEcCCcceEEEE
Q psy573 169 SRSLQLSDVRLE-DGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 169 ~~~l~i~~~~~~-d~g~y~C~~~n~~~~~~~~~ 200 (216)
...|.|.....+ |.|.|+|.|.|..|..+..+
T Consensus 154 ~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 154 QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 455777655554 89999999999999876554
No 92
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=158.77 Aligned_cols=178 Identities=11% Similarity=0.161 Sum_probs=129.5
Q ss_pred ccceEeccc-ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-C--cEEEEcccCCCCCceEEEEE
Q psy573 24 REEFRVQPK-SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-G--TNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 24 ~~~~~~~~~-~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~--~~l~i~~~~~~d~g~y~C~~ 99 (216)
+|.+...+. ...+.+|+.+.|.|.+..+.|.+.+.|++++..+............ . ..|.|.+++.+|+|.|+|.+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 344444443 6789999999999998437889999999999988544332333221 2 24999999999999999999
Q ss_pred EcCCCCcccceeEEEE---------------------eecceEEeCCCceeEeCCCcEEEEEEeCCCCCc-EEEEeeCCc
Q psy573 100 KNVAGTRESTDAVLRV---------------------LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL-TVHWKRLGS 157 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v---------------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~ 157 (216)
.+..... ...+.+ ..+|.+... ....+.+|+.+.|.|.+.+.|.+ .+.|++++.
T Consensus 186 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~ 261 (312)
T 2y23_A 186 QDGKATN---HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKDER 261 (312)
T ss_dssp ESSSCEE---EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-EEEEEETTTEEEEEEEEESCCSSCEEEEEETTE
T ss_pred EeCCceE---EEEEEEcchhhhhhcccccccccchhhccCCceeec-ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCE
Confidence 8643322 222222 112443322 22578899999999999999888 999999998
Q ss_pred cCC-CCCeeeecC-CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 158 AMP-EDRMSVLPS-RSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 158 ~~~-~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.+. ..+.....+ ..|.|.++..+|+|.|+|.|.|..|....++.|.++
T Consensus 262 ~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 262 EISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred ECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 775 233322222 589999999999999999999999999998888654
No 93
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.93 E-value=3e-24 Score=159.04 Aligned_cols=173 Identities=17% Similarity=0.232 Sum_probs=128.9
Q ss_pred ccceEEecCCcEEEEeeCCCCCC-----------CCeeEEeeCCEEe----ccc---cCceEEEecCcEEEEcccCCCCC
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP-----------EPTLVWKKNGHPI----DFE---NSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~-----------~~~~~W~~~~~~~----~~~---~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
...+.+.+|+.+.|.|.+ .+.| .+.+.||+++... ... ...+.. ..++.|.|.+++.+|+
T Consensus 14 ~~~v~v~~G~~v~L~C~~-~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~ 91 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPL-FEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS-KEKDVLWFRPTLLNDT 91 (349)
T ss_dssp CCCCEEETTSCEEEECTC-CCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE-EETTEEEESSCCGGGC
T ss_pred eeeEEEecCCeEEEEccc-cccccccccccccCCCceEEEEECCCCCcccccccccccCceEe-ecCCEEEEccCChhhC
Confidence 446789999999999998 5544 4899999987421 111 222332 3456899999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecceEEe----CCCceeEeCCCcEEEEEEe-----CCCCCcEEEEeeCCccCCCCC
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKPYIIR----GPKDTTVSAGSIIVFECSV-----GGDAVLTVHWKRLGSAMPEDR 163 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~----~~~~~~~~~g~~~~l~C~~-----~~~p~~~i~W~~~~~~~~~~~ 163 (216)
|.|+|.+.+..+.. ...+.|.|..++.... .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+....
T Consensus 92 G~Y~C~a~n~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~ 170 (349)
T 4dep_C 92 GNYTCMLRNTTYCS-KVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN 170 (349)
T ss_dssp EEEEEEEECSSCEE-EEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS
T ss_pred EEEEEEEecCCceE-EEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc
Confidence 99999999876654 4456777776553221 1234467789999999985 677899999999999886543
Q ss_pred eeeecCCeEEEecCCCCCCeEEEEEEEcCC-cce---EEEEEEEEEe
Q psy573 164 MSVLPSRSLQLSDVRLEDGGEYVCEAENAV-GKI---SASATLTVQS 206 (216)
Q Consensus 164 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-~~~---~~~~~l~v~~ 206 (216)
.....+..|.|.++..+|+|.|+|.+.|.. |.. +..+.|.|..
T Consensus 171 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 171 NVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp SEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred ceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 344455789999999999999999999987 443 6777777776
No 94
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.93 E-value=1.4e-24 Score=162.95 Aligned_cols=198 Identities=19% Similarity=0.302 Sum_probs=143.8
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCC---CCeeEEeeCCEEecc---ccCceEEEecCcEEEEcc
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHP---EPTLVWKKNGHPIDF---ENSKRLRLVDGTNLAIQD 86 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~---~~~~~W~~~~~~~~~---~~~~~~~~~~~~~l~i~~ 86 (216)
+..+.|.+.. +|.+...+....+.+|+.+.|.|.+ .+.+ .+.+.|++++..+.. ....++....++.|.|.+
T Consensus 93 s~~~~v~v~~-~p~~~~~~~~~~v~~G~~v~l~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 170 (388)
T 2v5m_A 93 SRDVHVRAVV-AQYYEADVNKEHVIRGNSAVIKCLI-PSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIRE 170 (388)
T ss_dssp CCCEEEEEEC-CCCCCCBCCCEEEETTSCEEECCBC-CTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESS
T ss_pred ecceEEEEcc-ccccccCccceeeecCCcEEEEEEC-cCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEec
Confidence 4455566544 3556666777889999999999998 4433 378999999876632 124456666678899999
Q ss_pred cCCCCC-ceEEEEEEcCCCCccc---ceeEEEEeec-----ceEE-eCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCC
Q psy573 87 SRKTDD-GRYQCVVKNVAGTRES---TDAVLRVLVK-----PYII-RGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLG 156 (216)
Q Consensus 87 ~~~~d~-g~y~C~~~~~~~~~~~---~~~~l~v~~~-----p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~ 156 (216)
++.+|+ |.|+|.+.+..+.... ....+.|..+ |.+. .......+.+|+.+.|.|.+.+.|.+.+.|++++
T Consensus 171 v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~ 250 (388)
T 2v5m_A 171 VGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFI 250 (388)
T ss_dssp CCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEEC
T ss_pred CCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecC
Confidence 999999 9999999986533211 1234555443 2211 1223456888999999999999999999999985
Q ss_pred ccCC------CCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 157 SAMP------EDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 157 ~~~~------~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
.... .........+.|.|.++..+|+|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 312 (388)
T 2v5m_A 251 EGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKI 312 (388)
T ss_dssp TTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEE
T ss_pred CCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCcccc
Confidence 4332 1122223457899999999999999999999999988899999998776543
No 95
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.93 E-value=1.2e-24 Score=160.03 Aligned_cols=192 Identities=17% Similarity=0.295 Sum_probs=141.4
Q ss_pred hhhceeeEEeeccce--EecccceEEecC---CcEEEEeeCCCCCCCCeeEEeeCCEEec--c---ccCceEEEecCcEE
Q psy573 13 EEKKKLKIEMLREEF--RVQPKSQRVAAG---DTALLECGPPRGHPEPTLVWKKNGHPID--F---ENSKRLRLVDGTNL 82 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~--~~~~~~~~~~~G---~~~~l~C~~~~~~~~~~~~W~~~~~~~~--~---~~~~~~~~~~~~~l 82 (216)
+..+.|.|... |.+ ...+....+.+| +.+.|.|.+..+.|.+.+.|++++.... . .....+.. ...|
T Consensus 120 ~~~~~l~V~~~-p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~L 196 (331)
T 3u83_A 120 ESQLNLTVMAK-PTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV--ISRY 196 (331)
T ss_dssp EEEEEEEEEBC-CEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE--EEEE
T ss_pred EEEEEEEEecC-CcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE--EEEE
Confidence 34566666654 333 234556788888 7799999733678889999999532211 0 01111111 1358
Q ss_pred EEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEe-CCCceeEeCCCcEEEEEEeCCCCCcE-EEEeeCCccCC
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIR-GPKDTTVSAGSIIVFECSVGGDAVLT-VHWKRLGSAMP 160 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~~ 160 (216)
.|.++..+|+|.|+|.+.+..+.. ...+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+. +.|++++..+.
T Consensus 197 ~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~ 275 (331)
T 3u83_A 197 RLVPSREAHQQSLACIVNYHMDRF-KESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLP 275 (331)
T ss_dssp EECCCGGGTTCEEEEEEEETTEEE-EEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCC
T ss_pred EEEeccccCCCEEEEEEecCCCcc-eeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccc
Confidence 888899999999999999987653 5567788888887664 33445688899999999999999998 99999998876
Q ss_pred CCCeeeecCCeEEEe-cCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 161 EDRMSVLPSRSLQLS-DVRLEDGGEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 161 ~~~~~~~~~~~l~i~-~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.. .....+.|.|. ++..+|.|.|+|.+.|..|.....+.|.|...+..
T Consensus 276 ~~--~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 276 KG--VEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp TT--EEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC----
T ss_pred cc--ceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchh
Confidence 54 22356789999 89999999999999999999999999999876654
No 96
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.93 E-value=8.6e-25 Score=148.19 Aligned_cols=145 Identities=19% Similarity=0.316 Sum_probs=106.1
Q ss_pred eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcc-cCCCCCceEEEEEEcCCCCcccceeE
Q psy573 34 QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQD-SRKTDDGRYQCVVKNVAGTRESTDAV 112 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~~ 112 (216)
....+|+.+.|.|.+ .+ + +.+.|++++..+... .+..|.|.+ ++.+|+|.|+|.+.|..+.. ...+.
T Consensus 9 ~v~~~G~~v~L~C~~-~~-~-~~i~W~k~g~~l~~~--------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~-~~~~~ 76 (186)
T 1jbj_A 9 KVSISGTSVELTCPL-DS-D-ENLKWEKNGQELPQK--------HDKHLVLQDFSEVEDSGYYVCYTPASNKNT-YLYLK 76 (186)
T ss_dssp EEEEETTEEEEECSS-CC-C-TTCEEEETTEEECSC--------CCSEEEEESCCTTTSCEEEEEECSSCCCCC-CEEEC
T ss_pred EEEeCCcEEEEEEeC-CC-C-CceEEEECCEECCCC--------CCCEEEECCCCccccCEEEEEEEEeCCCcE-EEEEE
Confidence 345789999999998 44 3 349999999988432 345799999 99999999999999877652 22222
Q ss_pred EEEee--cceEE------------------eCC--Cc---eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeee
Q psy573 113 LRVLV--KPYII------------------RGP--KD---TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVL 167 (216)
Q Consensus 113 l~v~~--~p~~~------------------~~~--~~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~ 167 (216)
+.|.. ++... ... .. ..+.+|+.+.|.|.+ |.|.+.|+|++..+.....
T Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~--- 150 (186)
T 1jbj_A 77 ARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA--- 150 (186)
T ss_dssp CCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---
T ss_pred EEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---
Confidence 22221 11100 000 00 123489999999998 7889999999998763321
Q ss_pred cCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 168 PSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 45789999999999999999999998876
No 97
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.93 E-value=7.9e-24 Score=166.76 Aligned_cols=191 Identities=17% Similarity=0.253 Sum_probs=141.9
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCee----EEee--CCE--Eecc-------ccCceEEEe-
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTL----VWKK--NGH--PIDF-------ENSKRLRLV- 77 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~----~W~~--~~~--~~~~-------~~~~~~~~~- 77 (216)
..+.|.|... |.+...+....+.+|+.+.|.|.+ .+.|.+.+ .|++ ++. .+.. ....++.+.
T Consensus 322 ~~~~l~V~~~-p~~~~~~~~~~~~~G~~v~l~C~~-~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~ 399 (585)
T 2ocw_A 322 QAWQLFVNEE-STIPRSPTVVKGVAGSSVAVLCPY-NRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLE 399 (585)
T ss_pred eeEEEEEecc-cccccCCcceEEEeCCcEEEEEec-CCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEec
Confidence 4556666553 666667778889999999999998 77787776 7999 776 3321 123344443
Q ss_pred --cCc--EEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeC----CCCCcE
Q psy573 78 --DGT--NLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVG----GDAVLT 149 (216)
Q Consensus 78 --~~~--~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~~ 149 (216)
.++ +|.|.+++.+|+|.|+|.+ +..+.. ...+.|.|...|.....+....+.+|+.+.|.|.+. +.|.+.
T Consensus 400 ~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~-~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~ 477 (585)
T 2ocw_A 400 EPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLW-RTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYW 477 (585)
T ss_pred cCCCcEEEEEECCCChhhCEEEEEcc-cCCCcc-ceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEE
Confidence 233 4999999999999999998 665543 456778887654444446777899999999999986 667889
Q ss_pred EEEeeCCccCCCCC-------eeeec----CCeEEEecCCCCCCeEEEEEEEcCCcceE-EEEEEEEEecc
Q psy573 150 VHWKRLGSAMPEDR-------MSVLP----SRSLQLSDVRLEDGGEYVCEAENAVGKIS-ASATLTVQSKY 208 (216)
Q Consensus 150 i~W~~~~~~~~~~~-------~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~~~~~-~~~~l~v~~~p 208 (216)
+.|++++..+.... ..... ...|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|
T Consensus 478 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 478 CKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 99999997663221 11111 14799999999999999999999998744 45889999877
No 98
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.92 E-value=1.3e-24 Score=150.07 Aligned_cols=165 Identities=17% Similarity=0.200 Sum_probs=117.4
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EEe----------ccccCceEEEec---CcEEEEcccCCCCCceE
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HPI----------DFENSKRLRLVD---GTNLAIQDSRKTDDGRY 95 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~~----------~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y 95 (216)
|....+.+|+.++|.|.+ .+.+.+.+.||++. ..+ ......++.... ...|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKA-SESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIY 85 (210)
T ss_dssp CSEEEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEcCCCCEEEEeeC-CCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEE
Confidence 777889999999999998 66777899999842 211 011123443332 23799999999999999
Q ss_pred EEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccCCCC-Cee----
Q psy573 96 QCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAMPED-RMS---- 165 (216)
Q Consensus 96 ~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~-~~~---- 165 (216)
.|.+.+..+........|.|.. +|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++..+... ...
T Consensus 86 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 165 (210)
T 1lk3_L 86 FCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQ 165 (210)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCC
T ss_pred EEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCc
Confidence 9999987654333344666654 4666554444444579999999999864 443 89999999877644 111
Q ss_pred eecC------CeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 166 VLPS------RSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 166 ~~~~------~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
...+ +.|.|..+..+|+|.|+|.|.|.....
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 166 DSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 0111 368999999999999999999987653
No 99
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.92 E-value=5e-24 Score=147.42 Aligned_cols=170 Identities=22% Similarity=0.319 Sum_probs=118.2
Q ss_pred ecccceEEecCCcEEEEeeCCCC------CCCCeeEEeeCCEEe---------------ccccCceEEEec-----CcEE
Q psy573 29 VQPKSQRVAAGDTALLECGPPRG------HPEPTLVWKKNGHPI---------------DFENSKRLRLVD-----GTNL 82 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~------~~~~~~~W~~~~~~~---------------~~~~~~~~~~~~-----~~~l 82 (216)
..|..+.+.+|+.++|.|.+... .+.+.+.||+++... .....+++.+.. +.+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34667889999999999987321 246789999986521 012234555543 2479
Q ss_pred EEcccCCCCCceEEEEEEcCCCCcc---cceeEEEEeec---ceEEeCCCceeEeCCCcEEEEEEeCCC----CCcEEEE
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGTRE---STDAVLRVLVK---PYIIRGPKDTTVSAGSIIVFECSVGGD----AVLTVHW 152 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~~~---~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~i~W 152 (216)
.|.+++.+|+|.|.|.+.+..+... ...+.|.|... |.+.. +. .+.+|+.+.|.|.+.+. |.|.+.|
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W 161 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSW 161 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEE
Confidence 9999999999999999998653211 23567777653 44433 22 36789999999999764 7889999
Q ss_pred eeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcc--eEEEEEEE
Q psy573 153 KRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGK--ISASATLT 203 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~--~~~~~~l~ 203 (216)
++++....... ....+.|.|..+..+|+|.|+|.|.|..+. .+..+.|.
T Consensus 162 ~~~~~~~~~~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~ 212 (214)
T 2zg1_A 162 TGNALSPLDPE--TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLN 212 (214)
T ss_dssp ESSTTSSSCSS--CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECC
T ss_pred eCCCCccCCCC--ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEE
Confidence 99987643322 234578999999999999999999998654 44454443
No 100
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.92 E-value=7.4e-25 Score=161.21 Aligned_cols=171 Identities=22% Similarity=0.280 Sum_probs=125.7
Q ss_pred cceEEecCCcEEEEeeCCCC---------CCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc-eEEEEEEc
Q psy573 32 KSQRVAAGDTALLECGPPRG---------HPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG-RYQCVVKN 101 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~---------~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~~ 101 (216)
..+.+.+|+++.|.|.+ .+ .|.+.+.||+++..+..... . ..++.|.|.+++.+|+| .|+|.+.+
T Consensus 37 ~~v~v~eG~~v~L~C~~-~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~-~---~~~~~L~i~~v~~~D~Gs~Y~C~a~n 111 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPP-IEDSLLSHRYNDKDNVVNWEKIGKTRRPLNR-R---VKNGDLWIANYTSNDSHRRYLCTVTT 111 (329)
T ss_dssp EEEEECTTSCEEECCHH-HHCTTTGGGSCCTTCEEEEEECSSSCEECST-T---EETTEEEESSCCGGGGGCCEEEEEEC
T ss_pred ceEEEECCCeEEEEccC-CCCccccccccCCCCeeEEEECCCCccccCc-e---eecceEEEcCCChHhCCCcEEEEEEe
Confidence 45679999999999987 33 36679999999876633211 1 33678999999999999 89999999
Q ss_pred CCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCC-CcEEEEeeCCccCCCC--CeeeecCCeEEEecCC
Q psy573 102 VAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDA-VLTVHWKRLGSAMPED--RMSVLPSRSLQLSDVR 178 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~~~~~~~~--~~~~~~~~~l~i~~~~ 178 (216)
..|........+.+..+|.+........+.+|+.+.|.|.+.+.| .+.+.|++++..+... +... .+..|.|.++.
T Consensus 112 ~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~-~~~~L~I~~v~ 190 (329)
T 3oq3_B 112 KNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ-SGQNLIIHNPE 190 (329)
T ss_dssp TTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE-ETTEEEECSCC
T ss_pred CCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEec-CCCEEEEeecC
Confidence 876543333233334444433222233456799999999999999 8999999999887532 2323 36889999999
Q ss_pred CCCCeEEEEEEEcC--Ccc----eEEEEEEEEEecc
Q psy573 179 LEDGGEYVCEAENA--VGK----ISASATLTVQSKY 208 (216)
Q Consensus 179 ~~d~g~y~C~~~n~--~~~----~~~~~~l~v~~~p 208 (216)
.+|+|.|+|.+.|. .|. .+..+.|.|..+|
T Consensus 191 ~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 191 LEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp GGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCC
T ss_pred hhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCC
Confidence 99999999999987 544 2334778887666
No 101
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=149.98 Aligned_cols=168 Identities=19% Similarity=0.283 Sum_probs=128.4
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..+.|.|.. +.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+.. ...+..|.|.+++.+|+|
T Consensus 74 ~~~~l~v~~--~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~-------~~~~~~l~i~~~~~~d~G 144 (262)
T 3rjd_A 74 DPIQLEIHR--GWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF-------FHWNSNLTILKTNISHNG 144 (262)
T ss_dssp CCEEEEEEC--SSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE-------EEECCCEEESSCCGGGCE
T ss_pred ccEEEEEec--cceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc-------cCCCCeEEEEECChhhCE
Confidence 344555543 45666677778899999999999855677889999999988732 123567999999999999
Q ss_pred eEEEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCC-cE----EEEeeCCccCCCCCee
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAV-LT----VHWKRLGSAMPEDRMS 165 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~----i~W~~~~~~~~~~~~~ 165 (216)
.|+|.+.+..+. ....+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.|. +. +.|++++..+..
T Consensus 145 ~Y~C~~~n~~~~-~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~---- 218 (262)
T 3rjd_A 145 TYHCSGMGKHRY-TSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG---- 218 (262)
T ss_dssp EEEEEEESSSEE-EEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE----
T ss_pred EEEEEEeCCCCc-cccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc----
Confidence 999999987743 34556777764 44555444 557889999999999988875 43 788998876542
Q ss_pred eecCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 166 VLPSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 166 ~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
......|.|.++..+|+|.|+|.+.|..|..
T Consensus 219 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 219 RNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred cCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 2345689999999999999999999999974
No 102
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.92 E-value=1.6e-23 Score=166.77 Aligned_cols=188 Identities=22% Similarity=0.340 Sum_probs=144.7
Q ss_pred hhhHhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccC
Q psy573 9 EKEEEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSR 88 (216)
Q Consensus 9 ~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 88 (216)
+...+..+.|.|...|+.+.+.+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. .+..|.|.++.
T Consensus 366 g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~~~----------~~~~L~i~~~~ 434 (642)
T 1e07_A 366 SVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHA-ASNPPAQYSWLIDGNIQQ----------HTQELFISNIT 434 (642)
T ss_pred CCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEc-CccCCCeEEEEECCEEcC----------CCceEEEccCC
Confidence 3344556778887766666677778889999999999998 788999999999998762 23569999999
Q ss_pred CCCCceEEEEEEcCCCCcc-cceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-
Q psy573 89 KTDDGRYQCVVKNVAGTRE-STDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR- 163 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~- 163 (216)
.+|+|.|+|.+.|..+... +..+.+.+.. +|.+. ......+.+|+.+.|.|.+. .|.+.+.|++++..+....
T Consensus 435 ~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~v~~g~~v~l~C~~~-~~~~~i~W~~~g~~l~~~~~ 512 (642)
T 1e07_A 435 EKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSIS-SNNSKPVEDKDAVAFTCEPE-AQNTTYLWWVNGQSLPVSPR 512 (642)
T ss_pred hhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEe-cCCceeecCCCeEEEEEECC-CCCcEEEEEECCEeCCCCCc
Confidence 9999999999999876542 2234455543 33333 33455778999999999998 4788999999998876443
Q ss_pred eeee-cCCeEEEecCCCCCCeEEEEEEEcCCcce-EEEEEEEEEecce
Q psy573 164 MSVL-PSRSLQLSDVRLEDGGEYVCEAENAVGKI-SASATLTVQSKYL 209 (216)
Q Consensus 164 ~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~~~~-~~~~~l~v~~~p~ 209 (216)
.... .+..|.|.++..+|.|.|+|.+.|..|.. +..+.|.|...|.
T Consensus 513 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~ 560 (642)
T 1e07_A 513 LQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPD 560 (642)
T ss_pred EEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCC
Confidence 3332 34689999999999999999999999874 4468888886554
No 103
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.92 E-value=4e-24 Score=147.85 Aligned_cols=165 Identities=19% Similarity=0.280 Sum_probs=118.5
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc-------ccCceEEEe---cCcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF-------ENSKRLRLV---DGTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~-------~~~~~~~~~---~~~~l~i~~~~~ 89 (216)
+.+...|..+.+.+|++++|.|.+ .+.+.+.+.||++. . .+.. ....++... .+.+|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQA-SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 345556777899999999999998 66688899999842 1 1100 112344333 224799999999
Q ss_pred CCCceEEEEEEcCCCC--cccceeEEEE---eecceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccCCCCC
Q psy573 90 TDDGRYQCVVKNVAGT--RESTDAVLRV---LVKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAMPEDR 163 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~--~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~ 163 (216)
+|+|.|.|.+.+..+. .......+.| ..+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+....
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~ 160 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGI 160 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSE
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCe
Confidence 9999999999987653 2233455666 34555655444455667999999999988 7889999999998775421
Q ss_pred -----------eeeecCCeEEEecCCCCCCeEEEEEEE
Q psy573 164 -----------MSVLPSRSLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 164 -----------~~~~~~~~l~i~~~~~~d~g~y~C~~~ 190 (216)
......+.|.|..+..+|.|.|+|.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 161 ENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 111122468899999999999999998
No 104
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.92 E-value=4e-24 Score=147.90 Aligned_cols=175 Identities=18% Similarity=0.256 Sum_probs=122.4
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCC---eeEEeeCCEEec----------------cccCceEEEe------cCcEEEE
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEP---TLVWKKNGHPID----------------FENSKRLRLV------DGTNLAI 84 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~---~~~W~~~~~~~~----------------~~~~~~~~~~------~~~~l~i 84 (216)
.|+.+.+.+|++++|.|.+ .+.+.+ .+.|++++.... .....++... .+++|.|
T Consensus 5 ~p~~vtv~~G~~v~L~C~v-~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFY-RGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp CCSEEEEETTSCEEECCEE-CCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred CCCeEEEEcCCCEEEEEEE-EcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 4567889999999999998 555544 589999764321 1111222221 1246999
Q ss_pred cccCCCCCceEEEEEEcCCCCcccceeEEEEeecc-eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC
Q psy573 85 QDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKP-YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR 163 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~ 163 (216)
.+++.+|+|.|.|.+.+..+........+.+..++ ..........+..|+.+.+.|.+.+.|.|.+.|++++..+....
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc
Confidence 99999999999999987655443333344443333 22333445566778999999999999999999999987654322
Q ss_pred eeee-----cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 164 MSVL-----PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 164 ~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.... ..+.|.|.++..+|+|.|+|.|.|..|.....+.+.|.
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 2111 12469999999999999999999999986666665554
No 105
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.92 E-value=4.6e-24 Score=148.92 Aligned_cols=172 Identities=15% Similarity=0.189 Sum_probs=114.0
Q ss_pred cceEEecCCcEEEEeeCCCCCCC---CeeEEeeCCEE-----------ecc----ccCceEEEec------CcEEEEccc
Q psy573 32 KSQRVAAGDTALLECGPPRGHPE---PTLVWKKNGHP-----------IDF----ENSKRLRLVD------GTNLAIQDS 87 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~---~~~~W~~~~~~-----------~~~----~~~~~~~~~~------~~~l~i~~~ 87 (216)
+++.+.+|++++|.|.+ .+.+. ..+.|+|++.. +.. ....+..... +.+|.|.++
T Consensus 12 ~pV~v~~G~~v~L~C~v-~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 12 GPILAMVGEDADLPCHL-FPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SCEEEETTSCEEEEEEE-ESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCEEEEcCCcEEEEEEE-ECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 34788999999999987 33332 37899986532 111 1122333221 247999999
Q ss_pred CCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccC-CCCC--
Q psy573 88 RKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAM-PEDR-- 163 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~-~~~~-- 163 (216)
+.+|+|.|+|.+.+..+.. ...+.+...+..........+.+|..+.|.|.+.+ .|.|.+.|+++++.+ ....
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~---~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~ 167 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYE---KALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAP 167 (226)
T ss_dssp CGGGCEEEEEEEEETTEEE---EEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECC
T ss_pred chHHCeeEEEEEECCCcEE---EEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceE
Confidence 9999999999999876543 23444444443333344557778999999999977 589999999976543 3221
Q ss_pred eeeecCCe---EEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 164 MSVLPSRS---LQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 164 ~~~~~~~~---l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
.....++. +.+..++.+|+|.|+|.|.|..|...+.+.|.|.++
T Consensus 168 ~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 168 VVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 11222332 334467889999999999999999999988888653
No 106
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.92 E-value=8.1e-24 Score=152.93 Aligned_cols=167 Identities=17% Similarity=0.146 Sum_probs=131.4
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
.+|.+...+....+.+|+.++|.|.+ .+ .+.|++++..+ ......+..|.|.+++.+|+|.|+|.+.+
T Consensus 11 ~~P~i~~~~~~~~v~~G~~v~l~C~~-~~----~i~W~~~~~~~------~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n- 78 (290)
T 2o26_X 11 SPPSIHPAQSELIVEAGDTLSLTCID-PD----FVRWTFKTYFN------EMVENKKNEWIQEKAEATRTGTYTCSNSN- 78 (290)
T ss_dssp -CCEESSCSSEEEEETTSCEEEEEEC-TT----EEEEEEECSSS------CEEEECSSEEEETTCCGGGCEEEEEEESS-
T ss_pred CCCEEeCCCCeEEEcCCCcEEEEECC-CC----cEEEecCCcce------eeecCCCceEEEeccCHHhCeEEEEEeeC-
Confidence 35667667778899999999999998 44 89999998765 12233457899999999999999999998
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCC-cEEEEe-eCCccCCCCC-eeeecCCeEEEecCCC
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAV-LTVHWK-RLGSAMPEDR-MSVLPSRSLQLSDVRL 179 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~-~~~~~~~~~~-~~~~~~~~l~i~~~~~ 179 (216)
+. ...+.|.|..+|.....+....+.+|+.+.|.|.+.+ |. +.+.|+ +++..+.... ........|.|.++..
T Consensus 79 -g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~ 154 (290)
T 2o26_X 79 -GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKR 154 (290)
T ss_dssp -SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCG
T ss_pred -Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccH
Confidence 32 5567888887776666667778889999999999985 77 899995 6777665433 3344567899999999
Q ss_pred CCCe-EEEEEEEcCCcc-eEEEEEEEEE
Q psy573 180 EDGG-EYVCEAENAVGK-ISASATLTVQ 205 (216)
Q Consensus 180 ~d~g-~y~C~~~n~~~~-~~~~~~l~v~ 205 (216)
+|.| .|+|.+.|..+. .+..+.|.|.
T Consensus 155 ~d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 155 AYHRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp GGTTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred HHCCCEEEEEEEECCceEEeEEEEEEEE
Confidence 9999 999999998665 3335777776
No 107
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=2.5e-25 Score=163.94 Aligned_cols=177 Identities=26% Similarity=0.419 Sum_probs=68.1
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGT 105 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 105 (216)
.....+....+.+|+.+.|.|.+....|.+.+.|++++..+.. ..++.. .++.|.|.+++.+|+|.|+|.+.+. +.
T Consensus 10 p~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~--~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~-~~ 85 (334)
T 1ry7_B 10 PEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVP--SERVLV-GPQRLQVLNASHEDSGAYSCRQRLT-QR 85 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCC--cccEEe-ccceEEEeecccccCEEEEEEEEeC-Ce
Confidence 3334477889999999999999833336789999999987732 223322 4568999999999999999999987 43
Q ss_pred cccceeEEEEeecce----------------------EEeC----CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC
Q psy573 106 RESTDAVLRVLVKPY----------------------IIRG----PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM 159 (216)
Q Consensus 106 ~~~~~~~l~v~~~p~----------------------~~~~----~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~ 159 (216)
. ...+.|.|...+. +... .....+..|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 86 ~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~ 164 (334)
T 1ry7_B 86 V-LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREF 164 (334)
T ss_dssp ----------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCC
T ss_pred E-EEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEEC
Confidence 2 4445666654331 1111 12246778999999999999999999999999877
Q ss_pred CCCCee-----eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 160 PEDRMS-----VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 160 ~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
...... ......|.|.++..+|+|.|+|.+.|..|.....+.|.|...
T Consensus 165 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 165 RGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 217 (334)
T ss_dssp CTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECC
T ss_pred cccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecC
Confidence 543211 113457999999999999999999999999888888888863
No 108
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.92 E-value=1.5e-24 Score=151.69 Aligned_cols=162 Identities=21% Similarity=0.350 Sum_probs=117.7
Q ss_pred cccceEEecCCcEEEEeeCCCCCCC-CeeEEeeCCEEec-----------cccCceEE----------EecCcEEEEccc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPE-PTLVWKKNGHPID-----------FENSKRLR----------LVDGTNLAIQDS 87 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~-~~~~W~~~~~~~~-----------~~~~~~~~----------~~~~~~l~i~~~ 87 (216)
.|....+.+|+.+.|.|.+ .+.+. +.+.|++++.... .....+.. ...++.|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v 84 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTP-TGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEA 84 (231)
T ss_dssp CCSEEEEETTCCEEECCCC-BSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSC
T ss_pred CCCcEEEEcCCCEEEeccc-CCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEccc
Confidence 4566789999999999998 66664 7999998643210 00122333 455567999999
Q ss_pred CCCCCceEEEEEEcCCCCcccceeEEEEeecc---eEEeCCCceeEeCCCcE-EEEEEe-CCCCCcEEEEeeCCccCCCC
Q psy573 88 RKTDDGRYQCVVKNVAGTRESTDAVLRVLVKP---YIIRGPKDTTVSAGSII-VFECSV-GGDAVLTVHWKRLGSAMPED 162 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~i~W~~~~~~~~~~ 162 (216)
+.+|+|.|.|.+.+.........+.|.|..+| .+...+....+..|+.+ .|.|.+ .+.|.+.+.|++++..+...
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVP 164 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccc
Confidence 99999999999998763333566778887664 45555555667788887 999999 88999999999999887644
Q ss_pred C-----eeeec------------CCeEEEecCCCCCCeEEEEEEEcC
Q psy573 163 R-----MSVLP------------SRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 163 ~-----~~~~~------------~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
. ..... .+.|.|.....+|.|.|+|.|.|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 165 VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 3 11111 145777755566699999999994
No 109
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.92 E-value=3.6e-25 Score=161.75 Aligned_cols=178 Identities=21% Similarity=0.255 Sum_probs=124.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE-ecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL-VDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.|. .+.+..+.+|+.+.|.|.+....|.+.+.|++++..+.... ++.. .....|.|.+++.+|+|.|+|.+.+.
T Consensus 7 ~P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 7 GPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE--KHDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp CCEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSC--C-----CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred CCcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCC--cEEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 45554 45568899999999999983333778999999999885332 2222 33468999999999999999999987
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCC----------CCCcEEEEeeCCccCCCC-CeeeecC--
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGG----------DAVLTVHWKRLGSAMPED-RMSVLPS-- 169 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~i~W~~~~~~~~~~-~~~~~~~-- 169 (216)
.+.. ...+.|.+...|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+... +......
T Consensus 84 ~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 84 RGKD-KSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp SCEE-EEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CCcE-EEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 7654 3334444443332222222233445666666666554 688999999999887643 3333222
Q ss_pred -CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 170 -RSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 170 -~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
..|.|.++..+|.|.|+|.+.|..|....++.|.+.
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 199 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 199 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeee
Confidence 349999999999999999999999988888777653
No 110
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.92 E-value=6.1e-24 Score=146.92 Aligned_cols=172 Identities=19% Similarity=0.243 Sum_probs=121.5
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC---EE--ec-------cccCceEEEe---cCcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG---HP--ID-------FENSKRLRLV---DGTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~---~~--~~-------~~~~~~~~~~---~~~~l~i~~~~~ 89 (216)
+.+...|..+.+.+|+.++|.|.+ .+.+.+.+.||+.. .. +. .....++... .+.+|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQA-SQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLES 80 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEe-CCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCc
Confidence 345556777899999999999998 66688899999832 11 10 0112344333 234799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEE---eecceEEeCCCceeEeCCCcEEEEEEeCCCCC--cEEEEeeCCccCCCCC-
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRV---LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAV--LTVHWKRLGSAMPEDR- 163 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~- 163 (216)
+|+|.|.|.+.+..+........|.| ..+|.+...+....+..|+.+.|.|.+.+.++ +.+.|++++..+....
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 160 (213)
T 3r06_A 81 EDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVL 160 (213)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE
T ss_pred ccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceE
Confidence 99999999998865543444566777 55667766555556667888999999987654 4899999998775431
Q ss_pred ee--ee--c------CCeEEEecCCCCCCeEEEEEEEcCCcceE
Q psy573 164 MS--VL--P------SRSLQLSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 164 ~~--~~--~------~~~l~i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
.. .. . ...|.|.....+|.|.|+|.+.|......
T Consensus 161 ~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 161 QSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred eccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 00 00 1 13577788888889999999999875533
No 111
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.92 E-value=9.6e-24 Score=155.19 Aligned_cols=188 Identities=17% Similarity=0.237 Sum_probs=130.7
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCC----CCCeeEEeeCC--E-------------EeccccCceEEEe----cCc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGH----PEPTLVWKKNG--H-------------PIDFENSKRLRLV----DGT 80 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~----~~~~~~W~~~~--~-------------~~~~~~~~~~~~~----~~~ 80 (216)
++.+...+..+.+.+|+.++|.|.+ .+. +.+.+.|++++ . .+.....+++.+. .+.
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 92 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSF-ANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDG 92 (331)
T ss_dssp -------CEEEEEETTCCEEECCBC-SSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBC
T ss_pred CcceEEcCCcEEEEecCCEEEeeec-CCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCc
Confidence 3445556667899999999999998 443 44579999954 1 1112234455543 245
Q ss_pred EEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEE--eCCCceeEeCC---CcEEEEEE-eCCCCCcEEEEee
Q psy573 81 NLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYII--RGPKDTTVSAG---SIIVFECS-VGGDAVLTVHWKR 154 (216)
Q Consensus 81 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~g---~~~~l~C~-~~~~p~~~i~W~~ 154 (216)
+|.|.+++.+|+|.|.|.+.+.........+.|.|..+|.+. ..+....+.+| +.+.|.|. ..+.|.+.+.|++
T Consensus 93 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 93 TIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred eEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 799999999999999998554332234556788888877663 34556677788 77999998 7888999999999
Q ss_pred CCccCCC------CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 155 LGSAMPE------DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 155 ~~~~~~~------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
++..... ..........|.|..+..+|+|.|+|.+.|..+..+.++.|.|..+|.+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~ 236 (331)
T 3u83_A 173 RLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTI 236 (331)
T ss_dssp SSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEE
T ss_pred CCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEE
Confidence 6332111 111111124588888899999999999999999988899999988876553
No 112
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.92 E-value=5.5e-24 Score=149.42 Aligned_cols=174 Identities=15% Similarity=0.212 Sum_probs=121.4
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Ee-------ccccCceEEEe---cCcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PI-------DFENSKRLRLV---DGTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~-------~~~~~~~~~~~---~~~~l~i~~~~~ 89 (216)
+.+...|....+.+|++++|.|.+ .+.+.+.+.||+.. . .+ ......++... .+.+|.|.+++.
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEec-CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 345566777899999999999998 56678899999842 1 11 01112334333 345799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEE---eecceEEeCCCceeEeCCCcEEEEEEeCCC-C-CcEEEEeeCCccCCCCC-
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRV---LVKPYIIRGPKDTTVSAGSIIVFECSVGGD-A-VLTVHWKRLGSAMPEDR- 163 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~- 163 (216)
+|+|.|.|.+.+..+........+.| ..+|.+...+....+..|+.+.|.|.+.+. | .+.+.|++++..+....
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ 183 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCcee
Confidence 99999999998766533334455666 345555554444445568889999999774 4 57999999998776431
Q ss_pred ----------eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy573 164 ----------MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISAS 199 (216)
Q Consensus 164 ----------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~ 199 (216)
........|.|.....+|+|.|+|.|.|........
T Consensus 184 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 184 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 011112458888888899999999999998654433
No 113
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.92 E-value=2.8e-23 Score=150.03 Aligned_cols=167 Identities=14% Similarity=0.199 Sum_probs=120.8
Q ss_pred eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccceeEE
Q psy573 34 QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVL 113 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l 113 (216)
..+.+|+.+.|.|.+ . .|.+.+.|++.+...... .. ......+. ...|+|.|+|.+.+..+...+..+.+
T Consensus 105 ~~v~~G~~v~l~C~~-~-~p~~~v~w~~~~~~~~~~--~~--~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l 174 (289)
T 3mjg_X 105 IFLTEITEITIPCRV-T-DPQLVVTLHEKKGDVALP--VP--YDHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYV 174 (289)
T ss_dssp EEESSCCCEEECCCB-S-CTTSCEEEEESSCCSCCC--CC--EETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEE
T ss_pred EEeecCCeEEEEeEc-C-CCCceEEEEeCCCCCccc--ee--ecCCcCee----eeccCcEEEEEEEeCCceeeeeeEEE
Confidence 678999999999998 3 677888898865322111 00 11111222 36799999999987665544555566
Q ss_pred EEee--cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC--Ceee-------ecCCeEEEecCCCCCC
Q psy573 114 RVLV--KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED--RMSV-------LPSRSLQLSDVRLEDG 182 (216)
Q Consensus 114 ~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~~~~-------~~~~~l~i~~~~~~d~ 182 (216)
.+.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++...... .... .....|.|.++..+|.
T Consensus 175 ~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 254 (289)
T 3mjg_X 175 YRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDS 254 (289)
T ss_dssp EECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCC
T ss_pred EecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhC
Confidence 6654 555555555577899999999999999999999999877643221 1111 1225799999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 183 GEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
|.|+|.+.|..|....+..|.|...|.+
T Consensus 255 G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 255 GTYTCNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEC--
T ss_pred cEEEEEeecCCCCceeEEEEEEEEEecC
Confidence 9999999999999999999999977654
No 114
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.92 E-value=6.5e-25 Score=162.01 Aligned_cols=191 Identities=21% Similarity=0.332 Sum_probs=138.1
Q ss_pred hhceeeEEeeccce-EecccceEEecCCcEEEEeeC----CCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEccc
Q psy573 14 EKKKLKIEMLREEF-RVQPKSQRVAAGDTALLECGP----PRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDS 87 (216)
Q Consensus 14 ~~~~l~v~~~~~~~-~~~~~~~~~~~G~~~~l~C~~----~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~ 87 (216)
..+.|.|...++.. ........+.+|+.+.|.|.+ ..+.|.+.+.|++++..+.... .++.... .+.|.|.++
T Consensus 109 ~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~-~~~~~~~~~~~L~i~~v 187 (339)
T 3o4o_C 109 MSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDN-EKFLSVRGTTHLLVHDV 187 (339)
T ss_dssp EEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTC-SSEEECTTSSEEEESSC
T ss_pred EEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCC-ceeEEcCCcceEEEccc
Confidence 34555555443221 122233578899999999983 2677889999999998874332 3444443 358999999
Q ss_pred CCCCCceEEEEEEcCCCCc---ccceeEEEEee-----cceEEeCCCceeEeCCCcEEEEEEe---CCCC-CcEEEEeeC
Q psy573 88 RKTDDGRYQCVVKNVAGTR---ESTDAVLRVLV-----KPYIIRGPKDTTVSAGSIIVFECSV---GGDA-VLTVHWKRL 155 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~~---~~~~~~l~v~~-----~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p-~~~i~W~~~ 155 (216)
+.+|+|.|+|.+.+..+.. ....+.|.|.. +|.+...+....+..|+.+.|.|.+ .+.| .+.+.|+++
T Consensus 188 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~ 267 (339)
T 3o4o_C 188 ALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTAN 267 (339)
T ss_dssp CGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESS
T ss_pred CHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEEC
Confidence 9999999999999876532 24456677763 4566666666688899999999999 8888 889999999
Q ss_pred CccCCCC----------CeeeecCC------eEEEecCCCCCC-eEEEEEEEcCCcceEEEEEEEEE
Q psy573 156 GSAMPED----------RMSVLPSR------SLQLSDVRLEDG-GEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 156 ~~~~~~~----------~~~~~~~~------~l~i~~~~~~d~-g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
+..+... +......+ .|.|.++..+|. |.|+|.|.|..|+.+..+.+.+.
T Consensus 268 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 268 DTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp SSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred CeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 8765321 11122223 799999999997 99999999999998877766544
No 115
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.92 E-value=4.1e-24 Score=152.67 Aligned_cols=172 Identities=20% Similarity=0.297 Sum_probs=128.9
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..+.|.|...++ ..+.+....+.+|+.+.|.|.+ . |.+.+.| +|..+.... ..+.|.|..+..+|.|
T Consensus 89 ~~~~l~V~~~p~-p~~~~~~~~v~~G~~v~l~C~~-~--p~~~i~W--~g~~~~~~~-------~~~~l~i~~~~~~~~g 155 (265)
T 2oz4_A 89 TLQTVTIYSFPA-PNVILTKPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQPLG-------PRAQLLLKATPEDNGR 155 (265)
T ss_dssp EEEEEEEECCCC-CEEEESCSEEETTCEEEEEEEC-C--TTSEEEE--SSCSSSCCS-------SEECCEEECCGGGTTE
T ss_pred EEEEEEEeCCCC-ceeecCCceecCCCcEEEEEEc-c--CCCEEEE--CCEEccCCC-------CcEEEEEccccccCCc
Confidence 456666665433 3344556778999999999998 3 8889999 766652111 1245889999999999
Q ss_pred eEEEEEEcCC-CCcc--cceeEEEEeecceEEeC--CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeec
Q psy573 94 RYQCVVKNVA-GTRE--STDAVLRVLVKPYIIRG--PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLP 168 (216)
Q Consensus 94 ~y~C~~~~~~-~~~~--~~~~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 168 (216)
.|+|.+.+.. |... ...+.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.|.+.|++++..+ ..
T Consensus 156 ~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~-------~~ 228 (265)
T 2oz4_A 156 SFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP-------LP 228 (265)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE-------CC
T ss_pred eEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCccc-------CC
Confidence 9999997544 4432 25677888888876443 34568889999999999999999999999998721 12
Q ss_pred CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 169 SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
.+.+. .+..+|+|.|+|.+.|..|..+..+.|.|.++
T Consensus 229 ~g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 229 IGESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp TTSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 22332 37889999999999999999999999988753
No 116
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.91 E-value=3e-23 Score=142.31 Aligned_cols=162 Identities=20% Similarity=0.256 Sum_probs=114.1
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccC-ceEE-EecCcEEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENS-KRLR-LVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~-~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.+...|. ..+.+|++++|.|.+ . .+.+.+.|||++..+..... .... ...+..|.|.+++.+|+|.|+|.+.+
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSEETVILQCWS-D-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEE-S-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCeEEEEcC-CccCCCCcEEEEEec-c-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 455666665 678999999999998 3 46779999999875421110 0000 11245799999999999999999976
Q ss_pred CCC----CcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC--eeee---cC
Q psy573 102 VAG----TRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR--MSVL---PS 169 (216)
Q Consensus 102 ~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~--~~~~---~~ 169 (216)
... ...+..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.|+|++..+.... .... ..
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~ 162 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQ 162 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEE
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceE
Confidence 421 1224456677754 355555444 47889999999999975 567899999998765321 1111 14
Q ss_pred CeEEEecCCCCCCeEEEEEEEcC
Q psy573 170 RSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
..|.|.+++ |+|.|+|.+.+.
T Consensus 163 ~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 163 ADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EEEEEEECC--SCEEEEEEEEET
T ss_pred EEEEeCCcC--CCeeEEEEEEcC
Confidence 579999998 999999999865
No 117
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.91 E-value=7.9e-24 Score=146.29 Aligned_cols=172 Identities=17% Similarity=0.210 Sum_probs=118.6
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCC---CCeeEEeeCC--EEec----------cccCceEEEec---CcEEEEcccC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHP---EPTLVWKKNG--HPID----------FENSKRLRLVD---GTNLAIQDSR 88 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~---~~~~~W~~~~--~~~~----------~~~~~~~~~~~---~~~l~i~~~~ 88 (216)
+.. |....+.+|+.++|.|.+ .+.+ .+.+.||+++ ..+. .....++.... ...|.|.+++
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 81 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRS-STGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQ 81 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEE-SSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred EEC-CCeEeecCCCCEEEEEEe-cccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCC
Confidence 344 777889999999999998 5555 4789999852 2220 01123443322 2479999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCCCCc--EEEEeeCCccCCCC
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL--TVHWKRLGSAMPED 162 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~ 162 (216)
.+|+|.|.|.+.+..+........|.|. .+|.+...+....+..|+.+.|.|.+.+.+++ .+.|++++..+...
T Consensus 82 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 161 (212)
T 1q0x_L 82 TEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAG 161 (212)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred ccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCC
Confidence 9999999999998765433334556663 45666554444445578899999999875433 89999999877543
Q ss_pred Cee----eec------CCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 163 RMS----VLP------SRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 163 ~~~----~~~------~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
... ... ...|.|.....+|.|.|+|.|.|......+++
T Consensus 162 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 162 METTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred eecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 211 111 13588888888999999999999876654443
No 118
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.91 E-value=4.5e-24 Score=151.48 Aligned_cols=172 Identities=20% Similarity=0.231 Sum_probs=120.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCC-----CCeeEEeeCC--EEe----------ccccCceEEEec---CcEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHP-----EPTLVWKKNG--HPI----------DFENSKRLRLVD---GTNLA 83 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-----~~~~~W~~~~--~~~----------~~~~~~~~~~~~---~~~l~ 83 (216)
++.+...|..+.+.+|++++|.|.+ .+.+ .+.+.||+++ ..+ ......++.... ..+|.
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 116 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKS-SQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLK 116 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEE-SSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred ceeEEeCCceEEecCCCcEEEEeec-cCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEE
Confidence 4667777888999999999999998 5555 4899999843 211 111223444332 23799
Q ss_pred EcccCCCCCceEEEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCcc
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSA 158 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~ 158 (216)
|.+++.+|+|.|.|.+.+..+........+.|.. +|.+...+.......|+.+.|.|.+.+. |. +.+.|++++..
T Consensus 117 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 196 (254)
T 2c1o_A 117 ISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 196 (254)
T ss_dssp ESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSE
T ss_pred ECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCc
Confidence 9999999999999999887554333334566653 4666554443334467899999999774 43 46999999987
Q ss_pred CCCC-Cee----------eecCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 159 MPED-RMS----------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 159 ~~~~-~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
+... ... ....+.|.|.++..+|+|.|+|.|.|.....
T Consensus 197 l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 197 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred ccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 6544 110 1112469999999999999999999987764
No 119
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.91 E-value=2.9e-23 Score=147.29 Aligned_cols=183 Identities=17% Similarity=0.269 Sum_probs=124.4
Q ss_pred eEecccceEEecCCcEEEEeeCCCCC--CCCeeEEeeC--CEEe---------------ccccCceEEEec-----CcEE
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGH--PEPTLVWKKN--GHPI---------------DFENSKRLRLVD-----GTNL 82 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~--~~~~---------------~~~~~~~~~~~~-----~~~l 82 (216)
+...|.++.+.+|+.++|.|.+ .+. +.+.+.||+. +... ......++.... ..+|
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 82 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTA-SGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYL 82 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEE-CSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEe-eCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEE
Confidence 3456667889999999999997 443 3679999982 1111 011223444432 1259
Q ss_pred EEcccCCCCCceEEEEEEcCCCCcccceeEEEEee---------------cceEEeCCCceeEeCCCcEEEEEEeCCCCC
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV---------------KPYIIRGPKDTTVSAGSIIVFECSVGGDAV 147 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 147 (216)
.|.+++.+|+|.|.|.+.+..+........|.|.. ++.+...+....+.+|+++.|.|.+.+.+.
T Consensus 83 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 162 (253)
T 3uzq_A 83 HLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVD 162 (253)
T ss_dssp EECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCE
T ss_pred EeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccc
Confidence 99999999999999999986554334456677764 355666667788999999999999998887
Q ss_pred c----EEEEeeCCc--cCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy573 148 L----TVHWKRLGS--AMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTV 204 (216)
Q Consensus 148 ~----~i~W~~~~~--~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v 204 (216)
+ .+.|+++.. .+. ..+.... ....|.|.+++.+|+|.|.|.+.|..+. ...-..|.|
T Consensus 163 ~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v 242 (253)
T 3uzq_A 163 RYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEI 242 (253)
T ss_dssp ETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEE
T ss_pred cCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEE
Confidence 6 899998532 111 1222211 1235999999999999999999987644 333456677
Q ss_pred Eeccee
Q psy573 205 QSKYLK 210 (216)
Q Consensus 205 ~~~p~~ 210 (216)
...+.+
T Consensus 243 ~~~~~~ 248 (253)
T 3uzq_A 243 KRPLEH 248 (253)
T ss_dssp CCC---
T ss_pred cCCCCC
Confidence 755443
No 120
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.91 E-value=3.4e-23 Score=168.92 Aligned_cols=193 Identities=23% Similarity=0.470 Sum_probs=148.4
Q ss_pred hceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccC-CCCCc
Q psy573 15 KKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSR-KTDDG 93 (216)
Q Consensus 15 ~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g 93 (216)
.+.|.|.. +.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ..+.....+++|.|.++. .+|+|
T Consensus 519 ~~~l~V~~--~p~~~~~~~~~v~~G~~v~l~C~~-~g~p~~~i~W~k~~~~l~~--~~~~~~~~~~~l~i~~v~~~~d~G 593 (816)
T 3dmk_A 519 SAKLNVYG--LPYIRQMEKKAIVAGETLIVTCPV-AGYPIDSIVWERDNRALPI--NRKQKVFPNGTLIIENVERNSDQA 593 (816)
T ss_dssp EEEEEECS--SCEECCCCCEEEETTCCEEEECCE-ECSSEEEEEEEETTEESCC--STTEEECTTSEEEESSCCHHHHCE
T ss_pred EEEEEEec--CCeeEccCCeEEecCCeEEEEEEe-cCCCCCEEEEEECCeEccc--CCceEEecCCeEEEEecCccccCE
Confidence 34444443 234445556788999999999998 6778889999999998743 344555667899999998 68999
Q ss_pred eEEEEEEcCCCCcccceeEEEEeecceEEe-CCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccCCCC-Ceeee---
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLVKPYIIR-GPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAMPED-RMSVL--- 167 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~~~-~~~~~--- 167 (216)
.|+|.+.|..+......+.+.+..+|.+.. ......+..|+.+.|.|.+.+.+. +.+.|++++..+... .....
T Consensus 594 ~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~ 673 (816)
T 3dmk_A 594 TYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVG 673 (816)
T ss_dssp EEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEET
T ss_pred EEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcC
Confidence 999999998876555566777777775543 234557889999999999976654 489999999877532 11111
Q ss_pred -cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 168 -PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 168 -~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
....|.|.++..+|+|.|+|.+.|..|....++.|.|..+|.+..
T Consensus 674 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~ 719 (816)
T 3dmk_A 674 RRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWIL 719 (816)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEE
T ss_pred CCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceee
Confidence 235799999999999999999999999999999999998887654
No 121
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.91 E-value=5.9e-23 Score=161.81 Aligned_cols=178 Identities=21% Similarity=0.312 Sum_probs=136.4
Q ss_pred ecccceEEecCCcEEEEeeCCCCCCC---CeeEEeeCCEEec------------cccCceEEEec---C--cEEEEcccC
Q psy573 29 VQPKSQRVAAGDTALLECGPPRGHPE---PTLVWKKNGHPID------------FENSKRLRLVD---G--TNLAIQDSR 88 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~~~~---~~~~W~~~~~~~~------------~~~~~~~~~~~---~--~~l~i~~~~ 88 (216)
..|..+.+.+|+.++|.|.+ .+.+. ..+.|++++.... ....+++.+.. + ..|.|.+++
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~-~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYY-PPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred cCcceeEEecCCcEEEEEeC-CCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 45667889999999999998 55443 3899999875321 11223444432 2 369999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCccCC-------
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSAMP------- 160 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~------- 160 (216)
.+|+|.|+|.+.+..+.. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.+. +.+.+.|++++....
T Consensus 84 ~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~ 162 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGL-SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 162 (585)
T ss_pred cccCEEEEEEcccCCCCc-eEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCC
Confidence 999999999998877654 55688889999988877888899999999999999865 457799999876431
Q ss_pred -------CCCeeeecCC------eEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 161 -------EDRMSVLPSR------SLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 161 -------~~~~~~~~~~------~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
..+......+ .|.|.++..+|+|.|+|.+.|..|.....+.|.|..++
T Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 223 (585)
T 2ocw_A 163 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE 223 (585)
T ss_pred cccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC
Confidence 1223332222 69999999999999999999999998888888888654
No 122
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.91 E-value=1.6e-23 Score=156.09 Aligned_cols=158 Identities=15% Similarity=0.170 Sum_probs=123.4
Q ss_pred eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccceeEE
Q psy573 34 QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVL 113 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l 113 (216)
..+.+|+.++|.|.+ .+.|.+.+.|++++..+ ...+..|.|.+++.+|+|.|+|.+.+..+.. ...+.+
T Consensus 106 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~-~~~~~l 174 (363)
T 1wio_A 106 THLLQGQSLTLTLES-PPGSSPSVQCRSPRGKN---------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKV-EFKIDI 174 (363)
T ss_dssp SSEESBSCEEEEEEC-CTTCCCCEEEECSSSCE---------EEESSEEEECSBCGGGCEECEEEEEETTEEE-EECCEE
T ss_pred eEEecCCCEEEEEEc-CCCCCCeEEEEcCCCcc---------cccceEEEEeeCChhcCCEEEEEEecCCCeE-EEEEEE
Confidence 467899999999998 66888999999987654 2345789999999999999999999764432 344556
Q ss_pred EEeecceEEeCCCceeEeCCCcEEEEEEeCC-----CCCcEEEEeeCCccCCC--------C-Ceeee-----------c
Q psy573 114 RVLVKPYIIRGPKDTTVSAGSIIVFECSVGG-----DAVLTVHWKRLGSAMPE--------D-RMSVL-----------P 168 (216)
Q Consensus 114 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~i~W~~~~~~~~~--------~-~~~~~-----------~ 168 (216)
.|...|... ....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.. . +.... .
T Consensus 175 ~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (363)
T 1wio_A 175 VVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGK 251 (363)
T ss_dssp CEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCS
T ss_pred EEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhccc
Confidence 666544322 4456788999999998877 77889999999987654 2 22221 2
Q ss_pred --CCeEEEecCCCCCCeEEEEEEEcC--CcceEEEEEEEEE
Q psy573 169 --SRSLQLSDVRLEDGGEYVCEAENA--VGKISASATLTVQ 205 (216)
Q Consensus 169 --~~~l~i~~~~~~d~g~y~C~~~n~--~~~~~~~~~l~v~ 205 (216)
...|.|.++..+|+|.|+|.+.|. .|.....+.|.|.
T Consensus 252 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 252 KLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp SSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred CCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 348999999999999999999999 8988888888776
No 123
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.91 E-value=1.2e-24 Score=150.24 Aligned_cols=166 Identities=16% Similarity=0.252 Sum_probs=119.4
Q ss_pred ceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEec---c-------ccCceEEEe---cCcEEEEcccCCCCCceEEE
Q psy573 33 SQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPID---F-------ENSKRLRLV---DGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~~---~-------~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C 97 (216)
.+.+.+|+.++|.|.+ . +.+.+.||++ +.... . ....++... .+.+|.|.+++.+|+|.|.|
T Consensus 9 ~~~v~~G~~v~L~C~~-~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 85 (211)
T 3tv3_L 9 SASGSPGQSITISCTG-T--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYC 85 (211)
T ss_dssp EEEECTTCEEEEEEEC-C--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred eEEEcCCCCEEEEEEE-C--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEE
Confidence 7789999999999998 3 7889999994 22110 0 012333322 23479999999999999999
Q ss_pred EEEcCCC-CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC--CCcEEEEeeCCccCCCCCe----ee
Q psy573 98 VVKNVAG-TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD--AVLTVHWKRLGSAMPEDRM----SV 166 (216)
Q Consensus 98 ~~~~~~~-~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~~~~~~~~----~~ 166 (216)
.+.+..+ ........|.|. .+|.+...+....+..|+.+.|.|.+.+. |.+.+.|++++..+..... ..
T Consensus 86 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 165 (211)
T 3tv3_L 86 GSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSK 165 (211)
T ss_dssp EEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred EEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceE
Confidence 9998776 233455677777 56666665555555579999999999875 3578999999987654211 01
Q ss_pred e------cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 167 L------PSRSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 167 ~------~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
. ....|.|..+..+|.|.|+|.+.|..+...+++.
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 166 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp CTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 1 1145888888888999999999999877666653
No 124
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.91 E-value=4.7e-23 Score=146.46 Aligned_cols=179 Identities=20% Similarity=0.292 Sum_probs=125.0
Q ss_pred ecccceEEecCCcEEEEeeCCCCCC--CCeeEEeeC--CEEec---------------cccCceEEEec-----CcEEEE
Q psy573 29 VQPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKN--GHPID---------------FENSKRLRLVD-----GTNLAI 84 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~--~~~~~---------------~~~~~~~~~~~-----~~~l~i 84 (216)
..|....+.+|+.++|.|.+ .+.+ .+.+.||++ +..+. .....++.... ..+|.|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKA-SGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQL 83 (256)
T ss_dssp EECCCEEECTTCCEEEEEEE-CSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred ECCCCeeecCCCcEEEEEEe-ccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEE
Confidence 34566789999999999998 5544 579999984 22110 01234554432 247999
Q ss_pred cccCCCCCceEEEEEEcCCCC----cccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCc-----EEEEee-
Q psy573 85 QDSRKTDDGRYQCVVKNVAGT----RESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL-----TVHWKR- 154 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~----~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~i~W~~- 154 (216)
.+++.+|+|.|.|.+.+..+. .......|.|..++.+...+....+.+|+++.|.|.+.+.|.+ .+.|++
T Consensus 84 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 84 SSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQ 163 (256)
T ss_dssp CSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred CcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEE
Confidence 999999999999999987542 1223467778777777666777789999999999999888765 899999
Q ss_pred -CCccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEecc
Q psy573 155 -LGSAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTVQSKY 208 (216)
Q Consensus 155 -~~~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~~~p 208 (216)
++..+. ..++... ....|.|.+++.+|+|.|+|.+.|.... ......|.|..++
T Consensus 164 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 164 KPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp CTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred CCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 444321 1222221 2246999999999999999999985433 3334456666444
No 125
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.91 E-value=2.7e-24 Score=161.67 Aligned_cols=175 Identities=22% Similarity=0.346 Sum_probs=132.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCC-CCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRG-HPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.|...|....+.+|+.+.|.|.+ .+ .|.+.+.|++++..+............+++|.|.+++.+|+|.|+|.+.+.
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~-~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 84 (395)
T 1bih_A 6 YPVLKDQPAEVLFRENNPTVLECII-EGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETP 84 (395)
T ss_dssp CCEECCCCSEEEEETTSCEEECCCE-ESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEET
T ss_pred CCEeecCCCceEEeCCCEEEEEEEE-ecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeC
Confidence 5788888889999999999999998 45 788999999999887544333333345678999999999999999999997
Q ss_pred CCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCc---cCC-----CCCeeeecCCeEE
Q psy573 103 AGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGS---AMP-----EDRMSVLPSRSLQ 173 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~---~~~-----~~~~~~~~~~~l~ 173 (216)
.+...+..+.+.+...+.....+....+.+|+.+.|.|.+ .+.|.+.+.|++++. ... ..+.....++.|.
T Consensus 85 ~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 164 (395)
T 1bih_A 85 AGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLY 164 (395)
T ss_dssp TEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEE
T ss_pred CCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEE
Confidence 7654444455555432211112334567789999999996 778899999999862 111 2344455667899
Q ss_pred EecCCCCCCe---EEEEEEEcCCcceEEE
Q psy573 174 LSDVRLEDGG---EYVCEAENAVGKISAS 199 (216)
Q Consensus 174 i~~~~~~d~g---~y~C~~~n~~~~~~~~ 199 (216)
|.++..+|.| .|+|.+.|..+.....
T Consensus 165 i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~ 193 (395)
T 1bih_A 165 FTIVTKEDVSDIYKYVCTAKNAAVDEEVV 193 (395)
T ss_dssp EEEECGGGCCSSEEEEEEEECTTCSSCEE
T ss_pred EEEEeeccCCCceEEEEEEEecccceEEE
Confidence 9999999999 9999999998874443
No 126
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.91 E-value=1.3e-22 Score=136.60 Aligned_cols=157 Identities=17% Similarity=0.220 Sum_probs=115.9
Q ss_pred ccceEEecCCcEEEEeeCCC-CCCCCeeEEee--CCEEecc--------ccCceEEEecCcEEEEcccCCCCCceEEEEE
Q psy573 31 PKSQRVAAGDTALLECGPPR-GHPEPTLVWKK--NGHPIDF--------ENSKRLRLVDGTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~--~~~~~~~--------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 99 (216)
+..+...+|++++|.|.... +.+.+.+.|++ ++..+.. ....++.+..+++|.|.+++.+|+|.|.|.+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 45578899999999995422 34567999999 8776521 2356677777889999999999999999999
Q ss_pred EcCCCCcc-cceeEEEEeec---ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEe
Q psy573 100 KNVAGTRE-STDAVLRVLVK---PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLS 175 (216)
Q Consensus 100 ~~~~~~~~-~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~ 175 (216)
.+..+... ...+.|.|..+ |.+.. .+..+.|.|.+.+.|.+.+.|++++..+. .....+.+.
T Consensus 86 ~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l~------~~~~~i~~~ 151 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHLK------LSQRVITHK 151 (182)
T ss_dssp EETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEEE------EESSCEEEE
T ss_pred EeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEECC------CCCcEEEEe
Confidence 98776542 23456666643 22222 23478999999998999999999998761 123334443
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 176 DVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 176 ~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
. ..+|.|.|+|.|.|..+..+....+
T Consensus 152 ~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 152 W-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp C-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred c-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 3 4789999999999999998777655
No 127
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.91 E-value=3.8e-23 Score=146.96 Aligned_cols=179 Identities=18% Similarity=0.272 Sum_probs=120.7
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EE---e------------ccccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HP---I------------DFENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~---~------------~~~~~~~~~~~~-----~~~l~i~ 85 (216)
.+....+.+|++++|.|.+ .+.+ .+.+.||+.. .. + ......++.... ..+|.|.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 86 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKT-SGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELR 86 (256)
T ss_dssp ECCCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ccCceEEcCCCCEEEEEEE-ecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEEC
Confidence 3445678999999999997 4544 5789999842 11 1 011223444432 2359999
Q ss_pred ccCCCCCceEEEEEEcCCC---CcccceeEEEEee----------------cceEEeCCCceeEeCCCcEEEEEEeCCCC
Q psy573 86 DSRKTDDGRYQCVVKNVAG---TRESTDAVLRVLV----------------KPYIIRGPKDTTVSAGSIIVFECSVGGDA 146 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~---~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p 146 (216)
+++.+|+|.|.|.+.+... ........|.|.. ++.+...+....+.+|+.+.|.|.+.+.+
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 166 (256)
T 3umt_A 87 SLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDI 166 (256)
T ss_dssp SCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCC
T ss_pred CCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCC
Confidence 9999999999999987621 1123345677764 55666667778899999999999999988
Q ss_pred CcEEEEeeCC--ccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEec
Q psy573 147 VLTVHWKRLG--SAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTVQSK 207 (216)
Q Consensus 147 ~~~i~W~~~~--~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~~~ 207 (216)
.+.+.|+++. ..+. ..+.... ...+|.|.+++.+|+|.|.|.+.|.... ......|.|...
T Consensus 167 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 167 GSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp TTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred CcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 8899999853 1111 1222221 1235999999999999999999986543 334566777765
Q ss_pred ce
Q psy573 208 YL 209 (216)
Q Consensus 208 p~ 209 (216)
+.
T Consensus 247 ~~ 248 (256)
T 3umt_A 247 AA 248 (256)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 128
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.91 E-value=8.9e-23 Score=139.85 Aligned_cols=166 Identities=18% Similarity=0.302 Sum_probs=116.0
Q ss_pred ceEEecCCcEEEEeeCCC---CCCCCeeEEeeCCEEeccc----------cCceEEE--ecCcEEEEcccCCCCCceEEE
Q psy573 33 SQRVAAGDTALLECGPPR---GHPEPTLVWKKNGHPIDFE----------NSKRLRL--VDGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~---~~~~~~~~W~~~~~~~~~~----------~~~~~~~--~~~~~l~i~~~~~~d~g~y~C 97 (216)
++.+.+|++++|.|.+.. +.+.+.+.|++++..+... ..++..+ ..+.+|.|.+++.+|+|.|.|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 467899999999998832 2256789999998876211 1222222 235689999999999999999
Q ss_pred EEEcCCCCcc----cceeEEEEeec---ceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCeeee--
Q psy573 98 VVKNVAGTRE----STDAVLRVLVK---PYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRMSVL-- 167 (216)
Q Consensus 98 ~~~~~~~~~~----~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~-- 167 (216)
.+.+..+... ...+.|.|..+ |.+... ....|+.+.|.|.+ .+.|.|.+.|++++..+........
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 9998765432 23556666654 333221 12458889999999 4899999999999987764432222
Q ss_pred cC-CeE---EEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 168 PS-RSL---QLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 168 ~~-~~l---~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
.. +.+ .+..+..+|.|.|+|.|.|..|..+..+++
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 22 222 224456689999999999999988877654
No 129
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.91 E-value=2.6e-23 Score=151.51 Aligned_cols=182 Identities=18% Similarity=0.268 Sum_probs=127.4
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEe---------------ccccCceEEEe----cCcEEEEcccCCCC
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPI---------------DFENSKRLRLV----DGTNLAIQDSRKTD 91 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~---------------~~~~~~~~~~~----~~~~l~i~~~~~~d 91 (216)
+..+.+.+|++++|.|.+..+.+.+.+.|+|++... ......+.... .+.+|.|.+++.+|
T Consensus 6 ~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 6 EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 345788999999999998444555689999854321 11122333332 23579999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEeecceE--EeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCeeee-
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLVKPYI--IRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRMSVL- 167 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~--~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~- 167 (216)
+|.|+|.+.+...........+.+...|.. ...+.......|+.+.|.|.+ .+.|.+.+.|++++..+........
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 999999998765443344556666655543 344445556678899999985 6789999999999987653322211
Q ss_pred ----cCCeEEEecCCCCCCeEEEEEEEcCCcc--eEEEEEEEEEecceeee
Q psy573 168 ----PSRSLQLSDVRLEDGGEYVCEAENAVGK--ISASATLTVQSKYLKVI 212 (216)
Q Consensus 168 ----~~~~l~i~~~~~~d~g~y~C~~~n~~~~--~~~~~~l~v~~~p~~~~ 212 (216)
..+.|.|..+..+|.|.|+|.+.|..+. ...++.|.|..+|.+..
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~ 216 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSV 216 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECC
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEE
Confidence 1246899999999999999999998766 45566666777776543
No 130
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.91 E-value=9.6e-24 Score=160.06 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=118.2
Q ss_pred eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccC-ceEEE-ecCcEEEEcccCCCCCceEEEEEEcCCCCccccee
Q psy573 34 QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENS-KRLRL-VDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDA 111 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~-~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 111 (216)
..+..|+.+.|.|.+ .+.|.|.+.|++++........ ..... .....+ ...|+|.|.|.+.|..|......+
T Consensus 149 ~~~~~~~~~~L~C~a-~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l-----~~~d~G~Y~C~A~N~~G~~~~~~~ 222 (423)
T 3qs7_E 149 YFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVL-----HELFGTDIRCCARNELGRECTRLF 222 (423)
T ss_dssp EEEECSSSSCEEEEE-EESSCCEEEEEEC-------------CEEECCSEE-----CCCCSSCEEEEEECSSCEEEEECE
T ss_pred cEeccCCceEEEEEE-eeecCCeEEEEECCCCCccccccccccccccceEE-----ecccCeEEEEEEEcCCCCcceeeE
Confidence 345678999999998 8899999999998775421100 00001 111112 578999999999998876544446
Q ss_pred EEEEeecceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccCCCCCee----------eecCCeEEEecCCCC
Q psy573 112 VLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAMPEDRMS----------VLPSRSLQLSDVRLE 180 (216)
Q Consensus 112 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~~~----------~~~~~~l~i~~~~~~ 180 (216)
.|.|..+|.. .+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+...... ......|.|.++..+
T Consensus 223 ~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 300 (423)
T 3qs7_E 223 TIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN 300 (423)
T ss_dssp EEESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTT
T ss_pred EEEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHH
Confidence 6777666543 445678889999999999988 677999999999877543211 112246999999999
Q ss_pred CCeEEEEEEEcCCcceEEEEEEEEEecceee
Q psy573 181 DGGEYVCEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 181 d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|+|.|+|.|.|. ...++.|.|..+|.+.
T Consensus 301 D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~ 328 (423)
T 3qs7_E 301 DTGYYTCSSSKH---PSQSALVTIVEKGFIN 328 (423)
T ss_dssp TCEEEEEEETTE---EEEEEEEEEESSCEEE
T ss_pred HCEEEEEEEecC---CCceEEEEEEeCCcce
Confidence 999999999998 6777888888776543
No 131
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.91 E-value=5.7e-24 Score=147.55 Aligned_cols=173 Identities=17% Similarity=0.250 Sum_probs=118.3
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCC-CCCeeEEeeCC---E--Ee-----------ccccCceEEEe---cCcEEEEc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGH-PEPTLVWKKNG---H--PI-----------DFENSKRLRLV---DGTNLAIQ 85 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~-~~~~~~W~~~~---~--~~-----------~~~~~~~~~~~---~~~~l~i~ 85 (216)
.+...| .+.+.+|+.++|.|.+ .+. +.+.+.||+.. . .+ ......++... .+.+|.|.
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTL-NSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEE-CGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred eEEeCC-cEEECCCCcEEEEEEC-CCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 344455 7889999999999998 666 78899999831 1 01 01111233332 23469999
Q ss_pred ccCCCCCceEEEEEEcCCC----CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeC
Q psy573 86 DSRKTDDGRYQCVVKNVAG----TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRL 155 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~----~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~ 155 (216)
+++.+|+|.|.|.+.+..+ ........|.|. .+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|+++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 9999999999999988664 122345577776 4566655444445556789999999987 4666 8999999
Q ss_pred CccCCCCCe---------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 156 GSAMPEDRM---------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 156 ~~~~~~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
+..+..... .....+.|.|.....+|.|.|+|.|.|..+....++
T Consensus 161 g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 161 GTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp TEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred CEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 987754210 011113477777878889999999999987766554
No 132
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.91 E-value=9e-23 Score=146.57 Aligned_cols=168 Identities=16% Similarity=0.272 Sum_probs=116.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE-----Eecc-------ccCceEEEec---CcEEEEcccC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH-----PIDF-------ENSKRLRLVD---GTNLAIQDSR 88 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~-----~~~~-------~~~~~~~~~~---~~~l~i~~~~ 88 (216)
.+.+...|..+.+.+|+.++|.|.+ .+.+.+.+.||+++. .+.. ....++.... ..+|.|.+++
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~-~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEc-CCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 3456667778889999999999998 667788999998542 1210 1123444332 2379999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEeecce--------------EEeCCCceeEeCCCcEEEEEEeCCCC--CcEEEE
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVLVKPY--------------IIRGPKDTTVSAGSIIVFECSVGGDA--VLTVHW 152 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~--------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W 152 (216)
.+|+|.|.|.+.+..+........|.|..++. ....+....+.+|+.+.|.|.+.+.+ .+.+.|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEE
Confidence 99999999999986544333345666665431 22334567888999999999998776 588999
Q ss_pred eeCCc--cC------------------CCCCeeeec-----CCeEEEecCCCCCCeEEEEEEEcC
Q psy573 153 KRLGS--AM------------------PEDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 153 ~~~~~--~~------------------~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
++++. .+ ...++.... ...|.|.+++.+|+|.|.|.+.|.
T Consensus 171 ~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 171 VRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 99641 11 112333221 137999999999999999999997
No 133
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.91 E-value=7e-24 Score=145.70 Aligned_cols=152 Identities=21% Similarity=0.344 Sum_probs=109.0
Q ss_pred EecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccceeEEEE
Q psy573 36 VAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 36 ~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v 115 (216)
+.+|+.++|.|.+ |.+.+.|+|++..+... ...+..|.|.+++.+|+|.|+|.+.+.. +..+.+.+
T Consensus 15 ~~~G~~v~L~C~~----p~~~i~W~k~g~~l~~~------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~----s~~~~v~v 80 (204)
T 1sy6_A 15 YQEDGSVLLTCDA----EAKNITWFKDGKMIGFL------TEDKKKWNLGSNAKDPRGMYQCKGSQNK----SKPLQVYY 80 (204)
T ss_dssp CCSSSEEEEEECS----CSSEEEEEETTEEEEEE------ESSCCCEEEEEGGGCCEEEEEEESSSSC----CCCEEEEE
T ss_pred ecCCCeEEEEEcC----CCCEEEEEECCEECCCC------CCCCCeEEeCCCCcCCCEEEEEEecCCC----CeeEEEEE
Confidence 3589999999976 67899999999887421 1235679999999999999999964422 22234444
Q ss_pred ee-------------------------------cceEEeCCCceeEe-CCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-
Q psy573 116 LV-------------------------------KPYIIRGPKDTTVS-AGSIIVFECSVGGDAVLTVHWKRLGSAMPED- 162 (216)
Q Consensus 116 ~~-------------------------------~p~~~~~~~~~~~~-~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~- 162 (216)
.. .+.+...+ ..+. +|+.+.|.|. +.|.+.+.|++++..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~ 156 (204)
T 1sy6_A 81 RMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP--YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDE 156 (204)
T ss_dssp EC------------------------------------CCC--CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCT
T ss_pred EEeccccccccccccccccccccccccccccccccceecCC--ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCcc
Confidence 30 11111111 2344 8999999999 6788899999999876542
Q ss_pred --CeeeecCCeEEEecC-CCCCCeEEEEEEEcCCcc-eEEEEEEEEE
Q psy573 163 --RMSVLPSRSLQLSDV-RLEDGGEYVCEAENAVGK-ISASATLTVQ 205 (216)
Q Consensus 163 --~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n~~~~-~~~~~~l~v~ 205 (216)
.......+.|.|.++ ..+|+|.|+|.+.|..|. .+..+.|.++
T Consensus 157 ~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 157 DDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp TCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred CCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 222235788999999 999999999999999997 4556666543
No 134
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.91 E-value=1.5e-22 Score=143.35 Aligned_cols=166 Identities=17% Similarity=0.253 Sum_probs=114.6
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC-----EEe-------ccccCceEEEec---CcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG-----HPI-------DFENSKRLRLVD---GTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~-----~~~-------~~~~~~~~~~~~---~~~l~i~~~~~ 89 (216)
..+...|..+.+.+|+.++|.|.+ .+.+.+.+.||+.. ..+ ......++.... ..+|.|.+++.
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRA-SQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEe-cccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 345556777889999999999998 67788899999853 111 011123333322 23799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec-------------------ceEEeCCCceeEeCCCcEEEEEEeCCCC--Cc
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK-------------------PYIIRGPKDTTVSAGSIIVFECSVGGDA--VL 148 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~-------------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~ 148 (216)
+|+|.|.|.+.+..+........|.|..+ +.....+....+.+|+.+.|.|.+.+.+ .+
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGS
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCC
Confidence 99999999998865543344456666653 2233344566788999999999998776 77
Q ss_pred EEEEeeC--CccCC------------------CCCeeeec-----CCeEEEecCCCCCCeEEEEEEEc
Q psy573 149 TVHWKRL--GSAMP------------------EDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 149 ~i~W~~~--~~~~~------------------~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
.+.|+++ +..+. ..++.... ..+|.|.+++.+|+|.|.|.+.+
T Consensus 164 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 8999997 33221 02222221 12699999999999999999997
No 135
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.90 E-value=7.8e-23 Score=145.33 Aligned_cols=181 Identities=17% Similarity=0.243 Sum_probs=123.2
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc--------ccCceEEEe-----cCcEEEEccc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF--------ENSKRLRLV-----DGTNLAIQDS 87 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~--------~~~~~~~~~-----~~~~l~i~~~ 87 (216)
.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. . .+.. ....++... ...+|.|.++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKY-SYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEE-ECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred EEEecCceEEecCCCeEEEEEEe-CCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 45566777899999999999998 66688899999832 1 1100 112233321 1246999999
Q ss_pred CCCCCceEEEEEEcCCCC---cccceeEEEEee--------------------cceEEeCCCceeEeCCCcEEEEEEeCC
Q psy573 88 RKTDDGRYQCVVKNVAGT---RESTDAVLRVLV--------------------KPYIIRGPKDTTVSAGSIIVFECSVGG 144 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~---~~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~ 144 (216)
+.+|+|.|.|.+.+..+. .......|.|.. ++.+...+....+.+|+.+.|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 999999999999886532 112334666664 456677777778889999999999987
Q ss_pred CCCcEEEEeeCCccCC------------------CCCeeee----cCCeEEEecCCCCCCeEEEEEEEcCCcc--eEEEE
Q psy573 145 DAVLTVHWKRLGSAMP------------------EDRMSVL----PSRSLQLSDVRLEDGGEYVCEAENAVGK--ISASA 200 (216)
Q Consensus 145 ~p~~~i~W~~~~~~~~------------------~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~~~--~~~~~ 200 (216)
. .+.+.|++...... ..++... ....|.|.+++.+|+|.|.|.+.|..|. ...-.
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt 242 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGS 242 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCe
Confidence 6 67899998432110 1111111 2247999999999999999999988764 22234
Q ss_pred EEEEEecc
Q psy573 201 TLTVQSKY 208 (216)
Q Consensus 201 ~l~v~~~p 208 (216)
.|.|...+
T Consensus 243 ~l~v~~~~ 250 (256)
T 3tf7_C 243 KLTVLELE 250 (256)
T ss_dssp EEEEECGG
T ss_pred EEEEEccc
Confidence 45555443
No 136
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.90 E-value=8.6e-24 Score=155.33 Aligned_cols=168 Identities=21% Similarity=0.377 Sum_probs=118.9
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCC-CCCeeEEeeCCEEec---cc----cCceEEE--------ecCcEEEEcccCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGH-PEPTLVWKKNGHPID---FE----NSKRLRL--------VDGTNLAIQDSRK 89 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~-~~~~~~W~~~~~~~~---~~----~~~~~~~--------~~~~~l~i~~~~~ 89 (216)
.+...|..+.+.+|+.+.|.|.+ .+. |.+.+.||+++.... .. ...++.. ..+..|.|.+++.
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~-~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTV-TSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEE-SCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred EEEcCCCceEEecCCcEEEEEEc-cCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 45566778899999999999998 554 778999999875321 00 1113332 2234799999999
Q ss_pred CCCceEEEEEEcCCCCc----ccceeEEEEeecce--EEeCCCceeEeCCCcEEEEEEeCCCCCc--EEEEeeCCccCCC
Q psy573 90 TDDGRYQCVVKNVAGTR----ESTDAVLRVLVKPY--IIRGPKDTTVSAGSIIVFECSVGGDAVL--TVHWKRLGSAMPE 161 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~----~~~~~~l~v~~~p~--~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~ 161 (216)
+|+|.|+|.+.+..+.. ......|.|...|. ....+ ...+.+|+.+.|.|.+.+.|++ .+.|++++..+..
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 99999999999875531 12345677765542 22222 3567889999999999888765 8999999988764
Q ss_pred CCeeee---------cCCeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 162 DRMSVL---------PSRSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 162 ~~~~~~---------~~~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
...... ..+.|.|.....+|.|.|+|.+.|..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 432111 1234677777777789999999998765
No 137
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.90 E-value=3.4e-23 Score=143.52 Aligned_cols=169 Identities=16% Similarity=0.202 Sum_probs=114.8
Q ss_pred ccceEEecCCcEEEEeeCCCCCC-CCeeEEeeCCE--Eec----------cccCceEEEe---cCcEEEEcccCCCCCce
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP-EPTLVWKKNGH--PID----------FENSKRLRLV---DGTNLAIQDSRKTDDGR 94 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~~~~--~~~----------~~~~~~~~~~---~~~~l~i~~~~~~d~g~ 94 (216)
|....+.+|+.++|.|.+..+.+ .+.+.||+++. ... .....++... ...+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 66788999999999999523332 57999999531 110 1112344433 23479999999999999
Q ss_pred EEEEEEcCCC-CcccceeEEEEe---ecceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccCCCC-Cee--
Q psy573 95 YQCVVKNVAG-TRESTDAVLRVL---VKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAMPED-RMS-- 165 (216)
Q Consensus 95 y~C~~~~~~~-~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~-~~~-- 165 (216)
|.|.+.+..+ ........|.|. .+|.+...+.......|+.+.|.|.+.+. |.+ .+.|++++..+... ...
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 9999998765 222334456665 34555543333333468899999999874 554 89999999877544 111
Q ss_pred e--ecC------CeEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy573 166 V--LPS------RSLQLSDVRLEDGGEYVCEAENAVGKISAS 199 (216)
Q Consensus 166 ~--~~~------~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~ 199 (216)
. ..+ +.|.|..+..+|+|.|+|.|.|........
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 208 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceE
Confidence 0 011 268899999999999999999987664433
No 138
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.90 E-value=4.1e-23 Score=151.04 Aligned_cols=175 Identities=15% Similarity=0.200 Sum_probs=125.0
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...|. ..+.+|++++|.|.+ .+. .+.+.|++++..+.... .....+..|.|.+++.+|+|.|+|.+.+..
T Consensus 24 ~P~i~~~p~-~~v~~G~~v~L~C~~-~~~-~~~~~W~k~g~~~~~~~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 97 (316)
T 3vh8_G 24 KPFLSAWPS-AVVPRGGHVTLRCHY-RHR-FNNFMLYKEDRIHIPIF---HGRIFQESFNMSPVTTAHAGNYTCRGSHPH 97 (316)
T ss_dssp CCEEEEESC-SEEETTSCEEEEEEB-TTB-CCSEEEEESSCSSSCHH---HHCCBSSCEEECSCCGGGCEEEEEEEBCSS
T ss_pred CCEeeccCC-CccCCCCCEEEEEEc-cCC-CceEEEEeCCCccceee---cCCcceEEEEECCCCcccCeEEEEEEEcCC
Confidence 566777776 578899999999998 444 67899999987653211 011235679999999999999999998633
Q ss_pred C----CcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeee-----ecCCe
Q psy573 104 G----TRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSV-----LPSRS 171 (216)
Q Consensus 104 ~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~-----~~~~~ 171 (216)
+ ...+..+.|.|.. +|.+...+.. .+.+|+.+.|.|.+. .+.+.+.|++++..+....... .....
T Consensus 98 ~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3vh8_G 98 SPTGWSAPSNPVVIMVTGNHRKPSLLAHPGP-LVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKAN 175 (316)
T ss_dssp SSSSBCCCCCCEEEEEECSSCCCEEEEESCS-EEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEE
T ss_pred CCcceecCCCcEEEEEecCCCCCeEEecCCC-ccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEE
Confidence 2 1224456666654 3455544444 488999999999995 4567899999988764321111 13457
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcc-----eEEEEEEEEEe
Q psy573 172 LQLSDVRLEDGGEYVCEAENAVGK-----ISASATLTVQS 206 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~n~~~~-----~~~~~~l~v~~ 206 (216)
|.|.++..+|+|.|+|.+.|..|. .+..+.|.|..
T Consensus 176 L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 176 FSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC
T ss_pred EEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC
Confidence 999999999999999999998774 24556666664
No 139
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.90 E-value=7.6e-26 Score=183.32 Aligned_cols=196 Identities=22% Similarity=0.327 Sum_probs=0.0
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEE------------------
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLR------------------ 75 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~------------------ 75 (216)
..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.........
T Consensus 541 ~~~~l~V~~-~p~i~~~p~-~~~~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (772)
T 3v2a_R 541 RVISFHVTR-GPEITLQPD-MQPTEQESVSLWCTA-DRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMF 617 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEEEEEC-CceeeccCC-cccccCCceEEEEec-cCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceee
Confidence 345555554 355555543 457899999999998 67788899999988665321111110
Q ss_pred -E--ecCcEEEEcccCCCCCceEEEEEEcCCCC-cccceeEEEE--eecceEEeCCCceeEeCCCcEEEEEEeCCCCCcE
Q psy573 76 -L--VDGTNLAIQDSRKTDDGRYQCVVKNVAGT-RESTDAVLRV--LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLT 149 (216)
Q Consensus 76 -~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~~l~v--~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 149 (216)
. .....|.|.++..+|+|.|+|.+.|..+. .......+.| ..+|.+...+....+.+|+.+.|.|.+.+.|.|.
T Consensus 618 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~ 697 (772)
T 3v2a_R 618 SNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQ 697 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCe
Confidence 0 01124999999999999999999985433 2222333444 6678777777777888999999999999999999
Q ss_pred EEEeeCCccCCCCC-eeee-cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 150 VHWKRLGSAMPEDR-MSVL-PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 150 i~W~~~~~~~~~~~-~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
+.|++++..+.... .... ..+.|.|.++..+|+|.|+|.|.|..|....++.|.|.++|....
T Consensus 698 v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~ 762 (772)
T 3v2a_R 698 IMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTN 762 (772)
T ss_dssp -----------------------------------------------------------------
T ss_pred EEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCccc
Confidence 99999998876542 2222 357899999999999999999999999999999999999887553
No 140
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.90 E-value=3.1e-23 Score=147.08 Aligned_cols=180 Identities=19% Similarity=0.221 Sum_probs=122.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccC-ceE-EEecCcEEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENS-KRL-RLVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~-~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.+...|. ..+.+|++++|.|.+ . .+.+.+.|||++..+..... ... ....+..|.|.+++.+|+|.|+|.+.+
T Consensus 7 kP~i~~~P~-~~V~~G~~VtL~C~~-~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 7 KPSLLAHPG-PLVKSEETVILQCWS-D-VRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCEECCBSC-SEEESSCCEEEEEEE-S-SCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCEEEEcCC-CEecCCCCEEEEEec-C-CCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 345555554 678999999999998 3 35678999998864421100 000 001235799999999999999999976
Q ss_pred CCC----CcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCe-ee----ecC
Q psy573 102 VAG----TRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRM-SV----LPS 169 (216)
Q Consensus 102 ~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~----~~~ 169 (216)
... ...+..+.|.|.. +|.+...+. ..+.+|+++.|.|.+.+.+ +.+.|+|++..+..... .. ...
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~ 161 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQ 161 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCB
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCcee
Confidence 421 2234556777764 355555444 4678999999999997654 68999999987643211 11 124
Q ss_pred CeEEEecCCCCCCeEEEEEEEcCCc-----ceEEEEEEEEEeccee
Q psy573 170 RSLQLSDVRLEDGGEYVCEAENAVG-----KISASATLTVQSKYLK 210 (216)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~~~n~~~-----~~~~~~~l~v~~~p~~ 210 (216)
..|.|.+++ |+|.|+|.+.|... ..+..+.|.|.+.|..
T Consensus 162 ~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~ 205 (257)
T 1b6u_A 162 ADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSN 205 (257)
T ss_dssp EEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC--
T ss_pred EEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCC
Confidence 679999998 99999999997532 2455678888877643
No 141
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.90 E-value=1.4e-22 Score=136.46 Aligned_cols=155 Identities=16% Similarity=0.150 Sum_probs=109.8
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeC-CEEec------------cccCceEEE-ecCcEEEEcccCCCCCceEEE
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKN-GHPID------------FENSKRLRL-VDGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~-~~~~~------------~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C 97 (216)
..+.+.+|++++|.|.+....+.+.+.|++. +..+. ....+++.+ ..+++|.|.+++.+|+|.|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4578999999999998732234679999994 32221 112256666 466789999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCCCeeeecCCeEEEec
Q psy573 98 VVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSD 176 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~ 176 (216)
.+.+.. .....+.|.|..++. .......+..+.|.|.+ .+ |.|.+.|++++..+. .....+|.+..
T Consensus 87 ~v~~~~--~~~~~~~L~V~~~~~-----~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-----~~~~~~l~~~~ 153 (180)
T 2dru_A 87 RMLHET--EDQWKITMEVYEMVS-----KPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR-----SLRQKTMSYQW 153 (180)
T ss_dssp EEESSS--EEEEEEEEEEECCCC-----CCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE-----EESSSEEEEEC
T ss_pred EEEcCC--eEEEEEEEEEECCCC-----CCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc-----CCCCCEEEEEE
Confidence 998765 334556777765321 11111234669999999 55 999999999998764 12344566533
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 177 VRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 177 ~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
.+|+|.|+|.|.|..+.......
T Consensus 154 --~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 154 --TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp --SCCSSCEEEEEEETTEEEEEEEC
T ss_pred --hhcCccEEEEEecCcCcccccee
Confidence 78999999999999998766654
No 142
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.90 E-value=2.3e-22 Score=141.31 Aligned_cols=165 Identities=18% Similarity=0.343 Sum_probs=115.1
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEec-------------cccCceEEEec----CcEEEEccc
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPID-------------FENSKRLRLVD----GTNLAIQDS 87 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~~-------------~~~~~~~~~~~----~~~l~i~~~ 87 (216)
+...|..+.+.+|+.++|.|.. +.+.+.+.||++ +.... .....++.... ..+|.|.++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCNQ--TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEE--CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred ceECccceEEeCCCEEEEEeec--CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 4556777899999999999983 667889999995 21110 11123343332 347999999
Q ss_pred CCCCCceEEEEEEcCCCC----cccceeEEEEeecc------------eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEE
Q psy573 88 RKTDDGRYQCVVKNVAGT----RESTDAVLRVLVKP------------YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVH 151 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~----~~~~~~~l~v~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~ 151 (216)
+.+|+|.|.|.+.+..+. .......|.|...+ .+...+....+.+|+.+.|.|.+.+.|.+.+.
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~ 160 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFP 160 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEE
Confidence 999999999999986432 11233456665433 44555666789999999999999999989999
Q ss_pred EeeCCcc--C-------------CCCCeeee-----cCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 152 WKRLGSA--M-------------PEDRMSVL-----PSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 152 W~~~~~~--~-------------~~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
|++++.. + ...++... ....|.|.+++.+|+|.|+|.+.|..
T Consensus 161 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 161 WYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9996421 1 01222221 12479999999999999999999974
No 143
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.90 E-value=3.1e-22 Score=141.44 Aligned_cols=175 Identities=18% Similarity=0.287 Sum_probs=119.2
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEe---------------ccccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPI---------------DFENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~---------------~~~~~~~~~~~~-----~~~l~i~ 85 (216)
.|....+.+|+.++|.|.+ .+.| .+.+.||++. ... ......++.... ..+|.|.
T Consensus 8 ~p~~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 86 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAA-SGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMN 86 (247)
T ss_dssp EECCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCEEEecCCcEEEEEEe-ccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEEC
Confidence 3445789999999999998 5555 5789999842 111 011234444432 2479999
Q ss_pred ccCCCCCceEEEEEEcCCCC-cccceeEEEEeec---------------ceEEeCCCceeEeCCCcEEEEEEeCCCCCcE
Q psy573 86 DSRKTDDGRYQCVVKNVAGT-RESTDAVLRVLVK---------------PYIIRGPKDTTVSAGSIIVFECSVGGDAVLT 149 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~-~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 149 (216)
+++.+|+|.|.|.+.+..+. .......|.|... +.+...+....+.+|+.+.|.|.+.+.+.+.
T Consensus 87 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~ 166 (247)
T 2ghw_B 87 SLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSN 166 (247)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTC
T ss_pred cCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccce
Confidence 99999999999999986221 1123346666643 2344445566788999999999999998889
Q ss_pred EEEee--CCccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEE
Q psy573 150 VHWKR--LGSAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTVQ 205 (216)
Q Consensus 150 i~W~~--~~~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~ 205 (216)
+.|++ ++..+. ..++... ...+|.|.+++.+|+|.|+|.+.|.... ......|.|.
T Consensus 167 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 167 LAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99999 444331 1222222 1236999999999999999999986433 2334455555
No 144
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=9e-23 Score=158.82 Aligned_cols=193 Identities=15% Similarity=0.196 Sum_probs=132.8
Q ss_pred hhceeeEEe---eccceEecccceEEecCCcEEEEeeCCCCCCC--CeeEEeeCCEEeccccCce-EEEecC------cE
Q psy573 14 EKKKLKIEM---LREEFRVQPKSQRVAAGDTALLECGPPRGHPE--PTLVWKKNGHPIDFENSKR-LRLVDG------TN 81 (216)
Q Consensus 14 ~~~~l~v~~---~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~--~~~~W~~~~~~~~~~~~~~-~~~~~~------~~ 81 (216)
..+.|.|.. .+|.+.+.+....+.+|+.+.|.|.+ .+.+. +.+.|++++..+....... .....+ ..
T Consensus 101 ~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~-~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~ 179 (523)
T 2rcj_C 101 TGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLI-SDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSY 179 (523)
T ss_pred CceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEe-ccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEE
Confidence 446677642 35667777777777899999999998 55543 3999999998763221100 001111 36
Q ss_pred EEEcccCCCCCceEEEEEEcCCCCcccceeEEE----EeecceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeC
Q psy573 82 LAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLR----VLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRL 155 (216)
Q Consensus 82 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~ 155 (216)
|.|.++..+|+|.|+|.+.+..+... ..+.+. +..+|.+........+.+|+.+.|.|.+.+. |.+ .+.|+++
T Consensus 180 L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~ 258 (523)
T 2rcj_C 180 LSLTPEQWKSHRSYSCQVTHEGSTVE-KTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSG 258 (523)
T ss_pred EEEechhcCCCceEEEEEEecCcccc-cceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecC
Confidence 99999999999999999998766532 223321 2345555544444456789999999999886 767 8999999
Q ss_pred CccCCCC---Cee-----eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 156 GSAMPED---RMS-----VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 156 ~~~~~~~---~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
+..+... ... ....+.|.|.++..+| |.|+|.|.|..|.......|.+...|.
T Consensus 259 g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~ 319 (523)
T 2rcj_C 259 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPS 319 (523)
T ss_pred CcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCce
Confidence 8764321 111 1112479999999999 999999999999877666666554443
No 145
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=1.8e-23 Score=159.90 Aligned_cols=172 Identities=18% Similarity=0.258 Sum_probs=120.0
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..+.|.|...++ ..+.+....+.+|+.++|.|.+ . |.+.+.| +|..+... .....|.|.++..+|+|
T Consensus 274 ~~~~l~V~~~~~-p~i~~~~~~v~~G~~v~l~C~~-~--p~p~i~W--~g~~~~~~-------~~~~~L~i~~~~~~d~G 340 (450)
T 1z7z_I 274 TLQTVTIYSFPA-PNVILTKPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQPL-------GPRAQLLLKATPEDNGR 340 (450)
T ss_dssp EEEEEEEECCCC-CEEEESCSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTC
T ss_pred EEEEEEEecCCC-CeEecCCeeEeCCCcEEEEEec-C--CCCEeEE--CCEEcCCC-------CceEEEEEecCcccCCc
Confidence 356666666433 3334445689999999999998 3 8889999 66655111 12347999999999999
Q ss_pred eEEEEEEcCCC-Cc--ccceeEEEEeecceEEeCC--CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeec
Q psy573 94 RYQCVVKNVAG-TR--ESTDAVLRVLVKPYIIRGP--KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLP 168 (216)
Q Consensus 94 ~y~C~~~~~~~-~~--~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 168 (216)
.|+|.+.|..+ .. ....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .
T Consensus 341 ~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~------~ 414 (450)
T 1z7z_I 341 SFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP------I 414 (450)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC------T
T ss_pred eEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCC------C
Confidence 99999986544 22 1356778888888776554 456888999999999999999999999999873221 1
Q ss_pred CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 169 SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
+..+ .+..+|+|.|+|.|.|..|..+..+.|.|.++
T Consensus 415 g~~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 415 GESV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp TSCE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCeE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 2222 57889999999999999999999999998753
No 146
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=3.5e-22 Score=152.76 Aligned_cols=189 Identities=16% Similarity=0.182 Sum_probs=135.6
Q ss_pred HhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCC---eeEEeeCCEEeccccCceEEEecCcEEEEcccC
Q psy573 12 EEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEP---TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSR 88 (216)
Q Consensus 12 ~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~---~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 88 (216)
.+..+.|.|...|..+...+.+..+.+|+.+.|.|.+ .+.+.+ .+.||+++..+...... ....++.|.|.++.
T Consensus 74 ~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~-~g~~~~~~~~v~W~k~g~~l~~~~~~--~~~~~~~L~i~~~~ 150 (450)
T 1z7z_I 74 STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQV-EGGAPRANLTVVLLRGEKELKREPAV--GEPAEVTTTVLVRR 150 (450)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEE-ECCBCGGGEEEEEEETTEEEEEEECC--TTTEEEEEEEECCS
T ss_pred ceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEe-cCCCCCcCcEEEEeeCCEEeeccccc--ccccceEEEEEeec
Confidence 3456778877755555567777889999999999998 666666 89999999987432210 01112479999999
Q ss_pred CCCCceEEEEEEcCCCCcc-------cceeEEEEeec----ceEEeCCCceeEeCCCcEEEEEEeCCC-C--CcEEEEee
Q psy573 89 KTDDGRYQCVVKNVAGTRE-------STDAVLRVLVK----PYIIRGPKDTTVSAGSIIVFECSVGGD-A--VLTVHWKR 154 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~-------~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~~~i~W~~ 154 (216)
.+|+|.|+|.+.|..+... +....+.+... |.+.. ...+.+|+.+.|.|.+.+. | .+.+.|++
T Consensus 151 ~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~ 227 (450)
T 1z7z_I 151 DHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227 (450)
T ss_dssp SCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEEEE
T ss_pred cccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEEeC
Confidence 9999999999998765321 12233334322 22221 1578899999999999888 6 78999999
Q ss_pred CCccCCCCCeeeecCCeEEEe---cCCCCCCe--EEEEEEEcCCcceEEEEEEEEEecc
Q psy573 155 LGSAMPEDRMSVLPSRSLQLS---DVRLEDGG--EYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~i~---~~~~~d~g--~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
++..+.. +.....+ .+.+. ++..+|.| .|+|.+.|..|.......|.|...|
T Consensus 228 ~~~~~~~-~~~~~~~-~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~ 284 (450)
T 1z7z_I 228 GDQRLNP-TVTYGND-SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (450)
T ss_dssp TTEECCC-EEEEETT-EEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCEeCCc-eEEecCC-ceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCC
Confidence 9988765 2222222 22222 67899999 9999999999998888888888743
No 147
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.90 E-value=1.2e-23 Score=146.37 Aligned_cols=174 Identities=24% Similarity=0.360 Sum_probs=120.2
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCC----eeEEeeCCEEecc-----------ccCceEEEe--------cCcEEEEccc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEP----TLVWKKNGHPIDF-----------ENSKRLRLV--------DGTNLAIQDS 87 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~----~~~W~~~~~~~~~-----------~~~~~~~~~--------~~~~l~i~~~ 87 (216)
|..+.+.+|+.++|.|.+..+.+.+ .+.|++++..... ...++..+. .+.+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 4456788999999999883333433 4999998642210 002333333 2568999999
Q ss_pred CCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcE-EEEEEeC-CCCCcEEEEeeCCccCCCCCe-
Q psy573 88 RKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSII-VFECSVG-GDAVLTVHWKRLGSAMPEDRM- 164 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~i~W~~~~~~~~~~~~- 164 (216)
+.+|+|.|.|.+.+.........+.|.|..+|.+...+.... ..|+.+ .|.|.+. +.|.+.+.|++++........
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~ 164 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQV 164 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcccee
Confidence 999999999999986522235566777887887654333323 677888 5999986 889999999987543322111
Q ss_pred ------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 165 ------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 165 ------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.....+.|.|.++..+|.|.|+|.|.|..+.....+.|...
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 165 PGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp CCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCC
T ss_pred ecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEE
Confidence 11122468999999999999999999999887766655444
No 148
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.90 E-value=1.3e-22 Score=147.88 Aligned_cols=165 Identities=15% Similarity=0.190 Sum_probs=122.0
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-C--cEEEEcccCCCCCceEEEEEEcCCCCcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-G--TNLAIQDSRKTDDGRYQCVVKNVAGTRE 107 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~--~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 107 (216)
+..+.+.+|+.+.|.|....+.|.+.+.|++++..+... .++.... + ..|.|.+++.+|+|.|+|.+.+..+...
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~ 85 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDS--PRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS 85 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTC--TTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCC--CCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE
Confidence 335678899999999988556788999999999988533 2333322 2 4899999999999999999998776432
Q ss_pred cceeEEEEee------------cceEEeCCC-ceeEeCCCcEEEEEEeC-CCCCcEEEEeeCCccCCCC-Ceeeec---C
Q psy573 108 STDAVLRVLV------------KPYIIRGPK-DTTVSAGSIIVFECSVG-GDAVLTVHWKRLGSAMPED-RMSVLP---S 169 (216)
Q Consensus 108 ~~~~~l~v~~------------~p~~~~~~~-~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~-~~~~~~---~ 169 (216)
...+.+.. +|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|++++..+... +..... .
T Consensus 86 --s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~ 163 (312)
T 2y23_A 86 --SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNT 163 (312)
T ss_dssp --EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTT
T ss_pred --EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCC
Confidence 34455432 444333222 56788999999999998 8899999999999887653 222221 1
Q ss_pred --CeEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy573 170 --RSLQLSDVRLEDGGEYVCEAENAVGKISAS 199 (216)
Q Consensus 170 --~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~ 199 (216)
..|.|.++..+|+|.|+|.+.|........
T Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 195 (312)
T 2y23_A 164 GIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 195 (312)
T ss_dssp TEEEEEESCCCGGGCEEEEEEEESSSCEEEEE
T ss_pred CEEEEEEccCCcccCEeEEEEEEeCCceEEEE
Confidence 239999999999999999998755444333
No 149
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.90 E-value=8.1e-23 Score=142.74 Aligned_cols=178 Identities=15% Similarity=0.211 Sum_probs=116.4
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEec----c-----------ccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPID----F-----------ENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~~----~-----------~~~~~~~~~~-----~~~l~i~ 85 (216)
.|....+.+|++++|.|.+ .+.+ .+.+.||++. .... . ...+++.+.. +.+|.|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKA-SGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp CCSEEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCCCeEEcCCCCEEEEEEe-cCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 4556789999999999998 4444 5789999853 2110 0 1134555432 3589999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccC
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAM 159 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 159 (216)
+++.+|+|.|.|.+.+...........|.|.. +|.+........+..|+.+.|.|.+.+. |.+ .+.|++++..+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 99999999999999875322222345677764 3444433223346689999999999875 666 99999998764
Q ss_pred CC---CCe----eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 160 PE---DRM----SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 160 ~~---~~~----~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
.. ... .....+.|.|.....+| |.|+|.|.|..+.......+.+.++|.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~ 220 (227)
T 1mju_H 165 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTI 220 (227)
T ss_dssp TEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC--
T ss_pred CcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCC
Confidence 21 111 11123468888888878 999999999887776666666666553
No 150
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.90 E-value=1.1e-22 Score=146.81 Aligned_cols=171 Identities=22% Similarity=0.273 Sum_probs=127.0
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEE-EecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLR-LVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+...+....+.+|+.++|.|.+ .+ .+.|++++.... ... ...+..|.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~-~~----~v~W~~~~~~~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVS-NG----SVEWDGPISPYW-----TLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEEC-SS----CCEEECSCSSSS-----EECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred CcEecCCCceEEECCCCCEEEEEEe-CC----cEEEccCCCceE-----EEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 3455556677889999999999998 43 499998754321 111 123468999999999999999999877
Q ss_pred CCCcccceeEEEEeecce-EEeCCCceeEeCCCcEEEEEEeCCCCCcE-EEEee-CCccCCC-CCeeeecCCeEEEecCC
Q psy573 103 AGTRESTDAVLRVLVKPY-IIRGPKDTTVSAGSIIVFECSVGGDAVLT-VHWKR-LGSAMPE-DRMSVLPSRSLQLSDVR 178 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~-~~~~~~~-~~~~~~~~~~l~i~~~~ 178 (216)
.+.. ...+.|.|..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+.. .+......+.|.|.++.
T Consensus 74 ~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 152 (289)
T 3ejj_X 74 PMAG-STTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAK 152 (289)
T ss_dssp -----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCC
T ss_pred CCcc-eeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecc
Confidence 6653 5567888877664 45666777899999999999998877665 99986 4544433 34455567789999999
Q ss_pred CCCCeEEEEEEE-cCCcceEEEEEEEEE
Q psy573 179 LEDGGEYVCEAE-NAVGKISASATLTVQ 205 (216)
Q Consensus 179 ~~d~g~y~C~~~-n~~~~~~~~~~l~v~ 205 (216)
.+|.|.|+|.+. +..+..+..+.|.|.
T Consensus 153 ~~d~G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 153 VLDSNTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cccCEEEEEEEEeCCCccccccEEEEEE
Confidence 999999999999 555566777888887
No 151
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.90 E-value=3.3e-23 Score=146.91 Aligned_cols=171 Identities=19% Similarity=0.198 Sum_probs=118.1
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCC-----CCeeEEeeCCE--E---e-------ccccCceEEEec---CcEEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHP-----EPTLVWKKNGH--P---I-------DFENSKRLRLVD---GTNLAI 84 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-----~~~~~W~~~~~--~---~-------~~~~~~~~~~~~---~~~l~i 84 (216)
+.+...|..+.+.+|++++|.|.+ .+.+ .+.+.||+++. . + ......++.... +.+|.|
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRS-SQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred cEEEeCCceEEEeCCCcEEEEEEc-CCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 345556778899999999999998 5555 58999999541 1 1 011123444332 237999
Q ss_pred cccCCCCCceEEEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccC
Q psy573 85 QDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAM 159 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 159 (216)
.+++.+|+|.|.|.+.+..+........|.|.. +|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++..+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 999999999999999886543323344666653 4555543433334468899999999874 443 79999999876
Q ss_pred CCC-Cee----eecC------CeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 160 PED-RMS----VLPS------RSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 160 ~~~-~~~----~~~~------~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
... ... ...+ ..|.|..+..+|+|.|+|.|.|.....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 543 111 0111 348899999999999999999987654
No 152
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.90 E-value=5.8e-23 Score=145.26 Aligned_cols=173 Identities=15% Similarity=0.182 Sum_probs=111.8
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCC-----eeEEeeCCEEec------cccCceEEEe-------------cCcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEP-----TLVWKKNGHPID------FENSKRLRLV-------------DGTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~-----~~~W~~~~~~~~------~~~~~~~~~~-------------~~~~l~i~ 85 (216)
.|..+.+.+|++++|.|.+ .+.|.+ .+.|++++.... .......... .+.+|.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~-~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNI-FYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp TTSEEEEETTSCEEECCEE-EESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred CCCCeEEeCCCCEEEeeEE-ecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 3445688999999999998 455544 499999632110 0000000000 12359999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeCCccCCCCC
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRLGSAMPEDR 163 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~ 163 (216)
+++.+|+|.|+|.+.+..+.. ...+.|.|..+|.+...+. .....|..+.|.|.+.+ .|.+ .+.|++++..+....
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~ 165 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKA-QGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPI 165 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCE
T ss_pred CCCHHHCeEEEEEEEeCCccc-eeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcc
Confidence 999999999999999876543 4567888888887766544 33456777889999988 7888 999999987543210
Q ss_pred ----------ee------eecCCeEEEecCCCCCCeEEEEEEEcCCcc--eEEEEEEEEE
Q psy573 164 ----------MS------VLPSRSLQLSDVRLEDGGEYVCEAENAVGK--ISASATLTVQ 205 (216)
Q Consensus 164 ----------~~------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~--~~~~~~l~v~ 205 (216)
.. ......|.+.....+|.|.|+|.+.|..+. .+..+.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 166 EISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp EECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred ccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 01 111235777888888999999999999886 5556666663
No 153
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.90 E-value=1.3e-22 Score=148.33 Aligned_cols=189 Identities=19% Similarity=0.222 Sum_probs=121.8
Q ss_pred hhhceeeEEee--ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE--ecCcEEEEcccC
Q psy573 13 EEKKKLKIEML--REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL--VDGTNLAIQDSR 88 (216)
Q Consensus 13 ~~~~~l~v~~~--~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~ 88 (216)
+..+.|.|... +|.+...+... +.+|+.++|.|.+ ..+.+.+.|++++..+.......... ..+..|.|.+++
T Consensus 106 s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~--~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~ 182 (316)
T 3vh8_G 106 SNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWS--DIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMM 182 (316)
T ss_dssp CCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEE--SSCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCC
T ss_pred CCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcC--CCCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCC
Confidence 45566666553 34555555544 8899999999998 34567899999987663211111111 123579999999
Q ss_pred CCCCceEEEEEEcCCCCc----ccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC
Q psy573 89 KTDDGRYQCVVKNVAGTR----ESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE 161 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~----~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~ 161 (216)
.+|+|.|+|.+.|..+.. .+..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+. .+.+.+.|++++..+..
T Consensus 183 ~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~ 260 (316)
T 3vh8_G 183 LALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHER 260 (316)
T ss_dssp GGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCE
T ss_pred hhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCC
Confidence 999999999999876631 14445666653 445544433 3678899999999997 47789999999987653
Q ss_pred CCeee--ec---CCeEEEecCCCCCCeEEEEEEEcCCc-----ceEEEEEEEEEecc
Q psy573 162 DRMSV--LP---SRSLQLSDVRLEDGGEYVCEAENAVG-----KISASATLTVQSKY 208 (216)
Q Consensus 162 ~~~~~--~~---~~~l~i~~~~~~d~g~y~C~~~n~~~-----~~~~~~~l~v~~~p 208 (216)
..... .. ...|.|.++. |+|.|+|.+.|..+ ..+..+.|.|.++|
T Consensus 261 ~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 261 RLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred ceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 21111 11 1578999998 99999999999765 35667777777765
No 154
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.90 E-value=6.5e-23 Score=142.41 Aligned_cols=171 Identities=16% Similarity=0.229 Sum_probs=115.5
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeC--CEEec---------------cccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKN--GHPID---------------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~--~~~~~---------------~~~~~~~~~~~-----~~~l~i~ 85 (216)
.|....+.+|+.++|.|.+ .+.+ .+.+.||++ +..+. .....++.+.. ..+|.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKA-SGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp ECCCEEECTTCCEEEEEEE-ESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred CCCCeEecCCCcEEEEEEE-eCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 4556789999999999998 4443 679999996 33221 01234554432 3589999
Q ss_pred ccCCCCCceEEEEEEcCCCC---cccceeEEEEeec----ceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeCC
Q psy573 86 DSRKTDDGRYQCVVKNVAGT---RESTDAVLRVLVK----PYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRLG 156 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~---~~~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~ 156 (216)
+++.+|+|.|.|.+.+..+. .......|.|... |.+...+....+..|+.+.|.|.+.+ .|.| .+.|++++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 99999999999999986531 1223456676653 55544333335678999999999988 7888 99999998
Q ss_pred ccCCC---CCee----eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 157 SAMPE---DRMS----VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 157 ~~~~~---~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
..+.. .... ....+.|.|..... |.|.|+|.|.|..+.......|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp BCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEEC
T ss_pred cccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEec
Confidence 76421 1100 01123578854444 5699999999998876555443
No 155
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.90 E-value=4.6e-23 Score=153.53 Aligned_cols=161 Identities=17% Similarity=0.236 Sum_probs=123.9
Q ss_pred ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEec------------cccCceEEEe------cCcEEEEcccCCCCCce
Q psy573 33 SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPID------------FENSKRLRLV------DGTNLAIQDSRKTDDGR 94 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~------------~~~~~~~~~~------~~~~l~i~~~~~~d~g~ 94 (216)
.+.+.+|+.+.|.|.+ .+.|.+.+.|++++..+. .....++... .+..|.|.+++.+|+|.
T Consensus 3 ~v~~~~G~~v~L~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 3 VVLGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEEETTSCEEECCCC-TTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEE
T ss_pred eEEEeCCCeEEEEEEe-cCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEE
Confidence 3578899999999998 678889999999975321 1122334332 24579999999999999
Q ss_pred EEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEE
Q psy573 95 YQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQL 174 (216)
Q Consensus 95 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i 174 (216)
|+|.+.+.. ..+.|.|.. +...+. ..+.+|+.+.|.|.+.+.|.+.+.|++++..+ ......|.|
T Consensus 82 Y~C~~~n~~-----~~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i 146 (363)
T 1wio_A 82 YICEVEDQK-----EEVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSV 146 (363)
T ss_dssp EEEEETTEE-----EEEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCE------EEESSEEEE
T ss_pred EEEEEEECC-----CcEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc------cccceEEEE
Confidence 999998753 245566654 223332 46789999999999988999999999987543 235678999
Q ss_pred ecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 175 SDVRLEDGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 175 ~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
.++..+|+|.|+|.+.|..+.....+.|.|...|.
T Consensus 147 ~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~ 181 (363)
T 1wio_A 147 SQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 181 (363)
T ss_dssp CSBCGGGCEECEEEEEETTEEEEECCEECEECCSC
T ss_pred eeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC
Confidence 99999999999999999887777777787776554
No 156
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.90 E-value=4.3e-23 Score=146.73 Aligned_cols=178 Identities=20% Similarity=0.295 Sum_probs=119.9
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeC--CE---Eec-----------cccCceEEEec-----CcEEEEcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKN--GH---PID-----------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~--~~---~~~-----------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
.|....+.+|+.++|.|.+ .+.+ .+.+.||++ +. .+. .....++.... ..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTV-SGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNS 84 (257)
T ss_dssp EECCSEECTTSEEEEEEEE-ESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEES
T ss_pred CCCCccccCCceEEEEEEE-ecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 3445678999999999998 5543 679999985 21 110 01234554432 24799999
Q ss_pred cCCCCCceEEEEEEcCCC-------C-cccceeEEEEeecc---------------eEEeCCCceeEeCCCcEEEEEEeC
Q psy573 87 SRKTDDGRYQCVVKNVAG-------T-RESTDAVLRVLVKP---------------YIIRGPKDTTVSAGSIIVFECSVG 143 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~-------~-~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~ 143 (216)
++.+|+|.|.|.+.+..+ . .......|.|...+ .+...+....+.+|+.+.|.|.+.
T Consensus 85 v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~ 164 (257)
T 1f3r_B 85 LQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGS 164 (257)
T ss_dssp CCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECS
T ss_pred CCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEEC
Confidence 999999999999998743 1 11234567776542 122334455788999999999999
Q ss_pred CCCCcEEEEee--CCccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 144 GDAVLTVHWKR--LGSAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 144 ~~p~~~i~W~~--~~~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
+.+.+.+.|++ ++..+. ..++... ....|.|.+++.+|+|.|.|.+.|..........|.|.
T Consensus 165 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~ 244 (257)
T 1f3r_B 165 QNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELK 244 (257)
T ss_dssp SCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCS
T ss_pred CcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEe
Confidence 88888999999 444331 1222221 22469999999999999999999975223334455565
Q ss_pred ecc
Q psy573 206 SKY 208 (216)
Q Consensus 206 ~~p 208 (216)
..+
T Consensus 245 ~~~ 247 (257)
T 1f3r_B 245 AAE 247 (257)
T ss_dssp SSC
T ss_pred CCC
Confidence 443
No 157
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.90 E-value=8.3e-23 Score=141.90 Aligned_cols=174 Identities=21% Similarity=0.307 Sum_probs=117.3
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCC---eeEEeeCCEEecc--------------ccCceEEE----------ecCcEEE
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEP---TLVWKKNGHPIDF--------------ENSKRLRL----------VDGTNLA 83 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~---~~~W~~~~~~~~~--------------~~~~~~~~----------~~~~~l~ 83 (216)
|..+.+..|++++|.|.+ .+.+.+ .+.|+|++..+.. ....+... ..+++|.
T Consensus 8 p~~V~~~~G~~v~L~C~~-~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 86 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHL-LPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA 86 (225)
T ss_dssp CSEEEEETTSCEEECCEE-CSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE
T ss_pred CCEEEEecCCCEEEEEEE-ECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE
Confidence 345678999999999998 554444 4899997643311 01111111 1235799
Q ss_pred EcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCC
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPED 162 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~ 162 (216)
|.+++.+|+|.|.|.+.+..+........+.+..+|.....+.......++.+.+.|.+ .+.|.+.+.|.+++......
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 99999999999999998876655444555666666665555555566667777777765 56788899999887644221
Q ss_pred Ceee-e------cCCeEEEecCCCCCCeEEEEEEEcCCcceEE--EEEEEEE
Q psy573 163 RMSV-L------PSRSLQLSDVRLEDGGEYVCEAENAVGKISA--SATLTVQ 205 (216)
Q Consensus 163 ~~~~-~------~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~--~~~l~v~ 205 (216)
.... . ..+.|.|.++..+|+|.|+|.|.|..+.... ++.|.|.
T Consensus 167 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 167 TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 1111 1 1245999999999999999999999887544 4444444
No 158
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.90 E-value=1.1e-22 Score=141.30 Aligned_cols=170 Identities=16% Similarity=0.257 Sum_probs=116.6
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EE---e-cc-------------ccCceEEEec-----CcEEE
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HP---I-DF-------------ENSKRLRLVD-----GTNLA 83 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~---~-~~-------------~~~~~~~~~~-----~~~l~ 83 (216)
.|....+.+|+.++|.|.+ .+.+ .+.+.||+++ .. + .. ...+++.... ..+|.
T Consensus 6 ~p~~~~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVA-SGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQ 84 (220)
T ss_dssp EECCEEECTTCCEEEEEEE-ESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEE-cCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEE
Confidence 3556789999999999998 4444 6799999853 11 1 00 0124555432 23899
Q ss_pred EcccCCCCCceEEEEEEcCCCCc--ccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeC
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTR--ESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRL 155 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~--~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~ 155 (216)
|.+++.+|+|.|.|.+.+..+.. ......|.|. .+|.+...+....+.+|+.+.|.|.+.+. |.| .+.|+++
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 164 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYG 164 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecC
Confidence 99999999999999999865321 1234566665 34555443333456789999999999887 888 9999998
Q ss_pred CccCC---CCC----eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 156 GSAMP---EDR----MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 156 ~~~~~---~~~----~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
+.... ... ......+.|.|.....++ |.|+|.|.|..|...+++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 165 ALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp TCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 86311 111 111123568888888766 9999999999998766654
No 159
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=4.4e-22 Score=154.96 Aligned_cols=173 Identities=18% Similarity=0.238 Sum_probs=126.0
Q ss_pred ecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EEec----------cccCceEEEec---CcEEEEcccCCCCCc
Q psy573 29 VQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HPID----------FENSKRLRLVD---GTNLAIQDSRKTDDG 93 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~~~----------~~~~~~~~~~~---~~~l~i~~~~~~d~g 93 (216)
..|..+.+.+|+.+.|.|.+ .+.+.+.+.||+++ ..+. .....++.... ...|.|.+++.+|+|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTG-TSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDES 83 (523)
T ss_pred ccCCceEEecCCcEEEEEEE-eccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCE
Confidence 45677899999999999998 67788899999974 2111 01123444322 247999999999999
Q ss_pred eEEEEEEcCCCCc--ccceeEEEE----eecceEEeCCCceeEeCCCcEEEEEEeCCCCCc--EEEEeeCCccCCCCCee
Q psy573 94 RYQCVVKNVAGTR--ESTDAVLRV----LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL--TVHWKRLGSAMPEDRMS 165 (216)
Q Consensus 94 ~y~C~~~~~~~~~--~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~~~~ 165 (216)
.|+|.+.+..+.. ......|.| ..+|.+...+....+.+|+.+.|.|.+.+.|++ .+.|++++..+......
T Consensus 84 ~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 163 (523)
T 2rcj_C 84 DYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVET 163 (523)
T ss_pred EEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEe
Confidence 9999999876421 223456777 345666666666667789999999999888654 89999999877543211
Q ss_pred e----ec------CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 166 V----LP------SRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 166 ~----~~------~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
. .. .+.|.|.++..+|+|.|+|.+.|..+.....+.+
T Consensus 164 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 210 (523)
T 2rcj_C 164 TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP 210 (523)
T ss_pred ccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceee
Confidence 1 01 1359999999999999999999998876555544
No 160
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.90 E-value=1e-22 Score=141.67 Aligned_cols=170 Identities=14% Similarity=0.231 Sum_probs=116.5
Q ss_pred ccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EE---ec--------------cccCceEEEec-----CcEEEE
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HP---ID--------------FENSKRLRLVD-----GTNLAI 84 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~---~~--------------~~~~~~~~~~~-----~~~l~i 84 (216)
|....+.+|+.++|.|.+ .+.+ .+.+.||++. .. +. ....+++.+.. +.+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCAT-SGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp ECCCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred CCceeEcCCCEEEEEEEe-cCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 445678999999999998 4433 6789999853 11 10 01124555442 248999
Q ss_pred cccCCCCCceEEEEEEcCCCC----cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEee
Q psy573 85 QDSRKTDDGRYQCVVKNVAGT----RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKR 154 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~ 154 (216)
.+++.+|+|.|.|.+.+..+. .......|.|.. +|.+...+....+..|+.+.|.|.+.+. |.| .+.|++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 86 NTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 165 (222)
T ss_dssp CSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEec
Confidence 999999999999999876531 122345666653 4555443333345689999999999875 877 999999
Q ss_pred CCccCCCCCe-------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 155 LGSAMPEDRM-------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 155 ~~~~~~~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
++..+..... .....+.|.|..+..+| |.|+|.|.|..|.......+
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 166 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp GTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 9876532111 11112468889999889 99999999999886655443
No 161
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=3.7e-22 Score=140.44 Aligned_cols=165 Identities=18% Similarity=0.276 Sum_probs=116.0
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCC----CCeeEEeeCC--EE---ec-------cccCceEEEec---CcEEEEcc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHP----EPTLVWKKNG--HP---ID-------FENSKRLRLVD---GTNLAIQD 86 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~----~~~~~W~~~~--~~---~~-------~~~~~~~~~~~---~~~l~i~~ 86 (216)
.+...|....+.+|+.++|.|.+ .+.+ .+.+.||++. .. +. .....++.... ..+|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRA-GESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDP 81 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ceEeeCCeEEecCCCCEEEEEeC-CCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcC
Confidence 34556777889999999999998 6666 6789999952 21 10 01123443332 23799999
Q ss_pred cCCCCCceEEEEEEcCCCCcccceeEEEEeecc------eEEeCCCceeEeCCCcEEEEEEeCCCC--CcEEEEeeCC--
Q psy573 87 SRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKP------YIIRGPKDTTVSAGSIIVFECSVGGDA--VLTVHWKRLG-- 156 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~-- 156 (216)
++.+|+|.|.|.+.+..+........|.|..++ .....+....+.+|+.+.|.|.+.+.| .+.+.|+++.
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g 161 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPE 161 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTT
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCC
Confidence 999999999999998765433445677776542 233445667888999999999998876 3589999963
Q ss_pred ccCC------------------CCCeeeec-----CCeEEEecCCCCCCeEEEEEEEc
Q psy573 157 SAMP------------------EDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 157 ~~~~------------------~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
..+. ..+..... ..+|.|.+++.+|+|.|+|.+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 162 QGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp SCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 2210 11222221 14699999999999999999984
No 162
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.89 E-value=5.3e-22 Score=139.89 Aligned_cols=167 Identities=19% Similarity=0.214 Sum_probs=114.2
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc-------ccCceEEEe---cCcEEEEcccCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF-------ENSKRLRLV---DGTNLAIQDSRKT 90 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~-------~~~~~~~~~---~~~~l~i~~~~~~ 90 (216)
.+...|..+.+.+|++++|.|.+ .+.+.+.+.||++. . .+.. ....++... ...+|.|.+++.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRA-SQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEe-CCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH
Confidence 45566778899999999999998 67778899999853 1 1100 112344433 1247999999999
Q ss_pred CCceEEEEEEcCCCCcccceeEEEEeecce-------------EEeCCCceeEeCCCcEEEEEEeCCCC--CcEEEEeeC
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRVLVKPY-------------IIRGPKDTTVSAGSIIVFECSVGGDA--VLTVHWKRL 155 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~ 155 (216)
|+|.|.|.+.+..+........|.|..++. ....+....+.+|+++.|.|.+.+.+ .+.+.|+++
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 999999999986543223345677766542 22223345688999999999998775 478999985
Q ss_pred C--ccCC-----------------CCCeeeec-----CCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 156 G--SAMP-----------------EDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 156 ~--~~~~-----------------~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
. ..+. ..+..... ..+|.|.+++.+|+|.|.|.+.|..
T Consensus 162 ~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 223 (242)
T 2znx_A 162 FPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGD 223 (242)
T ss_dssp CTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSS
T ss_pred CCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCc
Confidence 3 2110 12222221 1379999999999999999998853
No 163
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.89 E-value=5.9e-22 Score=132.31 Aligned_cols=150 Identities=15% Similarity=0.156 Sum_probs=109.0
Q ss_pred ceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccc----------cCceEEEe-cCcEEEEcccCCCCCceEEEEEEc
Q psy573 33 SQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFE----------NSKRLRLV-DGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~----------~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.+.+.+|++++|.|.+ . .|.+.+.|++++..+... ..++..+. .+++|.|.+++.+|+|.|.|.+.+
T Consensus 4 ~v~~~~G~~VtL~c~~-~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPS-N-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEETTCCEEECCCC-S-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred EEEEEcCCCEEEcCCC-C-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 4678899999999987 3 478899999988754211 22344443 567899999999999999999987
Q ss_pred CCCCcccceeEEEEeecc---eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCC
Q psy573 102 VAGTRESTDAVLRVLVKP---YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVR 178 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 178 (216)
..+ ...+.|.|..++ .+.... . ...|.|.+.+.|.|.+.|++++..+... ....+.+. .
T Consensus 82 ~~~---~~~~~L~V~~~~~~p~i~~~~-------~-~~~L~C~~~~~p~p~i~W~~~~~~l~~~-----~~~~l~~~--~ 143 (171)
T 1ccz_A 82 ITD---TMKFFLYVLEMVSKPMIYWEC-------S-NATLTCEVLEGTDVELKLYQGKEHLRSL-----RQKTMSYQ--W 143 (171)
T ss_dssp CCS---CEEEEEEEECCCCCCEEEEET-------T-TTEEEEECSSCSSCEEEEEETTEEEEEE-----SSSEEEEE--C
T ss_pred CCC---cEEEEEEEECcCCCCEEEEec-------C-CcEEEEEeCCCCCcEEEEEECCEECcCC-----cceEEEEe--c
Confidence 665 445677776542 222111 1 1379999998899999999998765421 22334443 3
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEE
Q psy573 179 LEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 179 ~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
.+|.|.|+|.|.|..+..+..+.|
T Consensus 144 ~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 144 TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp SCCSSCEEEEEEETTEEEEEEECC
T ss_pred cCCCceEEEEEEcccCcccceeEE
Confidence 678999999999999987776654
No 164
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=9.5e-22 Score=141.64 Aligned_cols=178 Identities=19% Similarity=0.333 Sum_probs=121.7
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEec---------------cccCceEEEec-----CcEE
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPID---------------FENSKRLRLVD-----GTNL 82 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~-----~~~l 82 (216)
+...|....+.+|++++|.|.+ .+.+ .+.+.||+++ .... .....++.... ..+|
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 107 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTA-SGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYL 107 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEec-cCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEE
Confidence 3456778899999999999997 5543 5789999953 1110 01134444432 2479
Q ss_pred EEcccCCCCCceEEEEEEcCCCC----cccceeEEEEeecc---------------eEEeCCCceeEeCCCcEEEEEEeC
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGT----RESTDAVLRVLVKP---------------YIIRGPKDTTVSAGSIIVFECSVG 143 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~----~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~ 143 (216)
.|.+++.+|+|.|.|.+.+..+. .......|.|...| .+...+....+.+|+++.|.|.+.
T Consensus 108 ~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~ 187 (282)
T 1qok_A 108 QLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSAS 187 (282)
T ss_dssp EECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEES
T ss_pred EECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEec
Confidence 99999999999999999987541 11233467776543 344445566789999999999999
Q ss_pred CCCCcEEEEee--CCccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy573 144 GDAVLTVHWKR--LGSAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTV 204 (216)
Q Consensus 144 ~~p~~~i~W~~--~~~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v 204 (216)
+.+ +.+.|+| ++..+. ..++... ....|.|.+++.+|+|.|.|.+.|.... ......|.|
T Consensus 188 ~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V 266 (282)
T 1qok_A 188 SSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLEL 266 (282)
T ss_dssp SCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEE
Confidence 888 8999999 444331 1222221 2246999999999999999999875432 333455666
Q ss_pred Ee
Q psy573 205 QS 206 (216)
Q Consensus 205 ~~ 206 (216)
..
T Consensus 267 ~~ 268 (282)
T 1qok_A 267 KR 268 (282)
T ss_dssp C-
T ss_pred ec
Confidence 54
No 165
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.89 E-value=3.6e-22 Score=141.88 Aligned_cols=170 Identities=19% Similarity=0.282 Sum_probs=118.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCC--CCCCeeEEeeCC--E---Ee------------ccccCceEEEe--c---C
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRG--HPEPTLVWKKNG--H---PI------------DFENSKRLRLV--D---G 79 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~--~~~~~~~W~~~~--~---~~------------~~~~~~~~~~~--~---~ 79 (216)
++.+...+..+.+.+|++++|.|.+ .+ .+.+.+.||+.. . .+ ......++... . .
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQA-SGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred ceEEEEecCCceecCCCeEEEEEEe-ecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 4566677788899999999999998 44 256789999742 1 11 01112345444 1 1
Q ss_pred cEEEEcccCCCCCceEEEEEEcC-----------CCCcccceeEEEEee---------------cceEEeCCCceeEeCC
Q psy573 80 TNLAIQDSRKTDDGRYQCVVKNV-----------AGTRESTDAVLRVLV---------------KPYIIRGPKDTTVSAG 133 (216)
Q Consensus 80 ~~l~i~~~~~~d~g~y~C~~~~~-----------~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g 133 (216)
.+|.|.+++.+|+|.|.|.+.+. ..........|.|.. ++.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 36999999999999999999886 122223345677765 3445666777789999
Q ss_pred CcEEEEEEeCCCCC-cEEEEeeC--CccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 134 SIIVFECSVGGDAV-LTVHWKRL--GSAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 134 ~~~~l~C~~~~~p~-~~i~W~~~--~~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+++.|.|.+.+.+. +.+.|++. +..+. ..+.... ....|.|.+++.+|+|.|.|.+.|...
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999988776 89999984 22211 1222221 123599999999999999999988544
No 166
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.89 E-value=9.6e-23 Score=158.43 Aligned_cols=168 Identities=15% Similarity=0.158 Sum_probs=118.8
Q ss_pred eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccceeEE
Q psy573 34 QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVL 113 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l 113 (216)
.....|+.+.|.|.+ .+.|.|.+.|++++........ ............+...|+|.|+|.+.|..|......+.|
T Consensus 149 ~~~~~~~~~~L~C~a-~G~P~P~i~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l 224 (527)
T 3qs9_E 149 YFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESCKE---ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTI 224 (527)
T ss_dssp EEEECSSSSCEEEEE-EESSCCEEEEEEC----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEE
T ss_pred cEEecCCceEEEEEE-ceecCCeEEEEECCCCCccccc---cCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEE
Confidence 344678889999998 8899999999998765521100 000111122334558899999999999888765545677
Q ss_pred EEeecceEEeCCCceeEeCCCcEEEEEEeC-CCCCcEEEEeeCCccCCCCCee----------eecCCeEEEecCCCCCC
Q psy573 114 RVLVKPYIIRGPKDTTVSAGSIIVFECSVG-GDAVLTVHWKRLGSAMPEDRMS----------VLPSRSLQLSDVRLEDG 182 (216)
Q Consensus 114 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~----------~~~~~~l~i~~~~~~d~ 182 (216)
.|...|.+ .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+...... .....+|.|.++..+|+
T Consensus 225 ~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Ds 302 (527)
T 3qs9_E 225 DLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDT 302 (527)
T ss_dssp ESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGC
T ss_pred EEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccC
Confidence 77776654 55677889999999999996 8999999999999876543211 11234699999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 183 GEYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
|.|+|.+.|. ...++.|.|..+|.+
T Consensus 303 G~Y~C~a~N~---~~~~~~L~V~~~p~i 327 (527)
T 3qs9_E 303 GYYTCSSSKH---PSQSALVTIVEKGFI 327 (527)
T ss_dssp EEEEEEETTE---EEEEEEEEEC--CEE
T ss_pred eEEEEEEEeC---CCceEEEEEEccCcc
Confidence 9999999998 677778888776654
No 167
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.89 E-value=3.8e-22 Score=141.99 Aligned_cols=184 Identities=15% Similarity=0.245 Sum_probs=113.3
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC---CE--Eecccc------------C-ceEEE----ecCcEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN---GH--PIDFEN------------S-KRLRL----VDGTNL 82 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~---~~--~~~~~~------------~-~~~~~----~~~~~l 82 (216)
+.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+. .. .+.... . .+... ....+|
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDL-AEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp --------CEEEETTCCEEEECCC------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred cccccCCceeEecCCCcEEEEEEE-ccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 556667778899999999999998 6667789999982 11 110000 0 11111 123479
Q ss_pred EEcccCCCCCceEEEEEEcCCCC--cccceeEEEEee-----------------cceEEeCCCceeEeCCCcEEEEEEeC
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGT--RESTDAVLRVLV-----------------KPYIIRGPKDTTVSAGSIIVFECSVG 143 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~~l~v~~-----------------~p~~~~~~~~~~~~~g~~~~l~C~~~ 143 (216)
.|.+++.+|+|.|.|.+.+..+. .......|.|.. .+.+...+....+.+|+++.|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 99999999999999999986542 223345666665 34566667778899999999999987
Q ss_pred CC-CCcEEEEeeCCccCC---------------CCCeeee-----cCCeEEEecCCCCCCeEEEEEEEcCCc-----ceE
Q psy573 144 GD-AVLTVHWKRLGSAMP---------------EDRMSVL-----PSRSLQLSDVRLEDGGEYVCEAENAVG-----KIS 197 (216)
Q Consensus 144 ~~-p~~~i~W~~~~~~~~---------------~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~~-----~~~ 197 (216)
+. +.+.+.|++...... ..++... ....|.|.+++.+|+|.|.|.+.+... ...
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~fg 241 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLIFG 241 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCEEC
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceEEC
Confidence 64 788999998542110 1122222 124599999999999999999975321 122
Q ss_pred EEEEEEEEecce
Q psy573 198 ASATLTVQSKYL 209 (216)
Q Consensus 198 ~~~~l~v~~~p~ 209 (216)
.-..|.|...+.
T Consensus 242 ~GT~l~v~~~~~ 253 (259)
T 3omz_A 242 KGTRVTVEPRSQ 253 (259)
T ss_dssp CCEEEEEEC---
T ss_pred CCCEEEEeeCcc
Confidence 334566665443
No 168
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.89 E-value=6e-24 Score=146.87 Aligned_cols=167 Identities=19% Similarity=0.280 Sum_probs=116.2
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EEec----------cccCceEEEe---cCcEEEEcccCCCCCceE
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HPID----------FENSKRLRLV---DGTNLAIQDSRKTDDGRY 95 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~~~----------~~~~~~~~~~---~~~~l~i~~~~~~d~g~y 95 (216)
|....+.+|+.++|.|.+ .+.+.+.+.||++. ..+. .....++... ....|.|.+++.+|+|.|
T Consensus 6 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 84 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSG-DQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAY 84 (212)
T ss_dssp CSEEEEETTSCCCEEEEE-TTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEE
T ss_pred CCeEEEeCCCcEEEEEec-CCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEE
Confidence 677889999999999997 66667789999852 2221 0112344333 224799999999999999
Q ss_pred EEEEEcCCCC--cccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccCCCCCee--
Q psy573 96 QCVVKNVAGT--RESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAMPEDRMS-- 165 (216)
Q Consensus 96 ~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~-- 165 (216)
.|.+.+.... .......+.|. .+|.+...+....+..|+.+.|.|.+.+. |. +.+.|++++..+......
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTK 164 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCC
T ss_pred EEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCC
Confidence 9999963221 11233456663 45666654544455679999999999876 44 799999999776533110
Q ss_pred -------eecCCeEEEecCCCCCCeEEEEEEEcCCcceEE
Q psy573 166 -------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISA 198 (216)
Q Consensus 166 -------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~ 198 (216)
....+.|.|.++..+|+|.|+|.|.|..+...+
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 165 PSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp CBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred ceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 111245889999999999999999998876433
No 169
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.89 E-value=2.3e-22 Score=146.87 Aligned_cols=184 Identities=23% Similarity=0.327 Sum_probs=128.4
Q ss_pred EecccceEEecCCcEEEEeeCCCCCCCC-----eeEEeeCCEEec-----------cccCceEEEe--------cCcEEE
Q psy573 28 RVQPKSQRVAAGDTALLECGPPRGHPEP-----TLVWKKNGHPID-----------FENSKRLRLV--------DGTNLA 83 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~~~~~~-----~~~W~~~~~~~~-----------~~~~~~~~~~--------~~~~l~ 83 (216)
...|..+.+..|++++|.|.+ .+.+.+ ++.|+|++.... .....+.... .+.+|.
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v-~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYL-QVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EECCSEECCBTTSCEEECCEE-ECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EcCCCEEEEecCCCEEEEEEE-ECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 345667788999999999987 443333 589999875321 1112222221 235699
Q ss_pred EcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEe-CCCCCcEEEEeeCCccCCCC
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSV-GGDAVLTVHWKRLGSAMPED 162 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~ 162 (216)
|.+++.+|+|.|+|.+.+.........+.|.+...|..........+..++.+.+.|.+ .+.|.+.+.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~ 162 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNT 162 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccc
Confidence 99999999999999987554444455667777778877666666667778889999987 46789999999998765422
Q ss_pred Ceee-ec------CCeEEEecCCCCCCeEEEEEEEcCCcc--eEEEEEEEEEecceeee
Q psy573 163 RMSV-LP------SRSLQLSDVRLEDGGEYVCEAENAVGK--ISASATLTVQSKYLKVI 212 (216)
Q Consensus 163 ~~~~-~~------~~~l~i~~~~~~d~g~y~C~~~n~~~~--~~~~~~l~v~~~p~~~~ 212 (216)
.... .. .+.|.|.....+|+|.|+|.+.|..+. ...++.|.|..+|.+.+
T Consensus 163 ~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~ 221 (313)
T 4fqp_A 163 SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSI 221 (313)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEE
T ss_pred ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCcccc
Confidence 1111 11 135888888899999999999998765 45556666766776543
No 170
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.89 E-value=1.5e-21 Score=138.69 Aligned_cols=179 Identities=17% Similarity=0.234 Sum_probs=119.0
Q ss_pred ecccceEEecCCcEEEEeeCCCC--CCCCeeEEeeCC--E--Eec------------cccCceEEEec-----CcEEEEc
Q psy573 29 VQPKSQRVAAGDTALLECGPPRG--HPEPTLVWKKNG--H--PID------------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~--~~~~~~~W~~~~--~--~~~------------~~~~~~~~~~~-----~~~l~i~ 85 (216)
..|.+..+.+|+.++|.|.+ .+ .+.+.+.||+.. . ... .....++.... ..+|.|.
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSV-TGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp EEECCSEECTTCCEEEEEEE-EESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCeEEcCCCcEEEEEEE-EcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 34556779999999999997 44 346799999832 1 110 11223444432 2269999
Q ss_pred ccCCCCCceEEEEEEcCCCC---cccceeEEEEeec--------------ceEEeCCCceeEeCCCcEEEEEEeCCCCCc
Q psy573 86 DSRKTDDGRYQCVVKNVAGT---RESTDAVLRVLVK--------------PYIIRGPKDTTVSAGSIIVFECSVGGDAVL 148 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~---~~~~~~~l~v~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 148 (216)
+++.+|+|.|.|.+.+..+. .......|.|..+ +.+...+....+.+|+++.|.|.+.+.+.+
T Consensus 92 ~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 171 (257)
T 3gkz_A 92 SVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSS 171 (257)
T ss_dssp SCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCG
T ss_pred CCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccc
Confidence 99999999999999986211 1233456777654 456666667789999999999999888877
Q ss_pred -EEEEeeCC--ccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEecc
Q psy573 149 -TVHWKRLG--SAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISASATLTVQSKY 208 (216)
Q Consensus 149 -~i~W~~~~--~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~~~p 208 (216)
.+.|++.. ..+. ..++... ....|.|.+++.+|+|.|.|.+.+.... ...-..|.|...+
T Consensus 172 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 172 SHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp GGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC-
T ss_pred eEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeCC
Confidence 89999842 2211 1222211 1235999999999999999999875433 2233456666444
No 171
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.89 E-value=4.9e-23 Score=144.36 Aligned_cols=170 Identities=17% Similarity=0.244 Sum_probs=113.8
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCC--EEe---c-------cccCceEEEe---cCcEEEEcccCCCCCce
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNG--HPI---D-------FENSKRLRLV---DGTNLAIQDSRKTDDGR 94 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~--~~~---~-------~~~~~~~~~~---~~~~l~i~~~~~~d~g~ 94 (216)
|....+.+|+.++|.|.+....+.+ .+.||++. ... . .....++... ...+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 7778899999999999983223334 79999863 211 0 0112344333 23479999999999999
Q ss_pred EEEEEEcCCCC--cccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCCCC--cEEEEeeCCccCCCCCee-
Q psy573 95 YQCVVKNVAGT--RESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGDAV--LTVHWKRLGSAMPEDRMS- 165 (216)
Q Consensus 95 y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~~- 165 (216)
|.|.+.+..+. .......|.|. .+|.+...+.......|+.+.|.|.+.+.++ +.+.|++++..+......
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99999987652 12223445553 2344433233333346889999999987643 389999999877543111
Q ss_pred ---------eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 166 ---------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 166 ---------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
....+.|.|..+..+|.|.|+|.|.|..+...+++
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 11124588889999999999999999988765554
No 172
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.89 E-value=2.5e-23 Score=152.86 Aligned_cols=185 Identities=18% Similarity=0.224 Sum_probs=116.0
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCC--eeEEeeCCEEeccccCceEEEe-c------CcEEEE
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEP--TLVWKKNGHPIDFENSKRLRLV-D------GTNLAI 84 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~-~------~~~l~i 84 (216)
..+.|.|...+....+......+.+|+.+.|.|.+ .+.|.+ .+.|++++..+..... ..... . ...|.|
T Consensus 107 ~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~-~g~p~~~~~v~W~k~g~~l~~~~~-~~~~~~~~~~~~~~s~L~i 184 (327)
T 2wng_A 107 AGTELSVRAKPSAPVVSGPAARATPQHTVSFTCES-HGFSPRDITLKWFKNGNELSDFQT-NVDPVGESVSYSIHSTAKV 184 (327)
T ss_dssp CCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEE-EEEBSSCCEEEEEETTEECCCEEE-EEECSSCCSCEEEEEEEEE
T ss_pred CcEEEEEEecCCCceeeccccccCCCCEEEEEEEE-eCccCCCcEEEEEECCEEcccccc-ccccccCCCceEEEEEEEE
Confidence 34567776654433333444678899999999998 555544 8999999988743221 01000 1 124777
Q ss_pred cccCCCCCceEEEEEEcCCCCc--ccceeEE--EEeecceEEeCCCceeEeCCCcEEEEEEeCCCC-Cc-EEEEeeCCcc
Q psy573 85 QDSRKTDDGRYQCVVKNVAGTR--ESTDAVL--RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDA-VL-TVHWKRLGSA 158 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~~--~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~i~W~~~~~~ 158 (216)
.....+|.|.|+|.+.+..+.. ......+ .+..+|.+...+.. +.+|+.+.|.|.+.+.+ .+ .+.|++++..
T Consensus 185 ~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~ 262 (327)
T 2wng_A 185 VLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNV 262 (327)
T ss_dssp ECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred echhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeE
Confidence 7777777899999999876542 1112222 34556666544333 67899999999998854 43 7999999987
Q ss_pred CCCC---CeeeecC------CeEEEecCCCCCCeEEEEEEEcCCcc-eEEEEEE
Q psy573 159 MPED---RMSVLPS------RSLQLSDVRLEDGGEYVCEAENAVGK-ISASATL 202 (216)
Q Consensus 159 ~~~~---~~~~~~~------~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~~~~l 202 (216)
+... ......+ ..|.|..+..+|.|.|+|.|.|..+. .++++.+
T Consensus 263 l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~ 316 (327)
T 2wng_A 263 SRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDL 316 (327)
T ss_dssp EEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEEC
T ss_pred ccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheEE
Confidence 6421 1111122 34778888999999999999999987 4555443
No 173
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.88 E-value=5.6e-23 Score=150.14 Aligned_cols=171 Identities=16% Similarity=0.245 Sum_probs=123.1
Q ss_pred cceEEecCCcEEEEeeCCCCCC-CCeeEEeeCCEEecc--ccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCccc
Q psy573 32 KSQRVAAGDTALLECGPPRGHP-EPTLVWKKNGHPIDF--ENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRES 108 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 108 (216)
..+.+.+|+.+.|.|.+ .+.+ .+.+.|++++..... ....++... ++.|.|.+++.+|+|.|+|.+.+..+.. .
T Consensus 13 ~~~~v~~G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~ 89 (315)
T 1itb_B 13 IILVSSANEIDVRPCPL-NPNEHKGTITWYKDDSKTPVSTEQASRIHQH-KEKLWFVPAKVEDSGHYYCVVRNSSYCL-R 89 (315)
T ss_dssp CCCEEETTSCCCCBCCC-CSCCCSSCCCEECTTSCSCSCCCTTSSSEEC-SSBEECTTCCGGGCSCCEECCCSSSCCC-C
T ss_pred eEEEEcCCCcEEEEeec-cCcCCCceEEEEeCCCcCccccccCCcEecc-CCeEEECCCChhhCEEEEEEEeCCceEE-E
Confidence 35789999999999998 5555 789999999864321 223333333 4589999999999999999999876653 2
Q ss_pred ceeEEEEe-ecceEEeCC---CceeEeCCCcEEEEEEe------CCCCCcEEEEeeCCccCCCCC-eeeecCCeEEEecC
Q psy573 109 TDAVLRVL-VKPYIIRGP---KDTTVSAGSIIVFECSV------GGDAVLTVHWKRLGSAMPEDR-MSVLPSRSLQLSDV 177 (216)
Q Consensus 109 ~~~~l~v~-~~p~~~~~~---~~~~~~~g~~~~l~C~~------~~~p~~~i~W~~~~~~~~~~~-~~~~~~~~l~i~~~ 177 (216)
..+.+.+. .+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.... ........|.|.++
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v 169 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNV 169 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSC
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEec
Confidence 23333332 233222111 12467789999999998 788999999999998875432 23345678999999
Q ss_pred CCCCCeEEEEEEE-cCCcce---EEEEEEEEE
Q psy573 178 RLEDGGEYVCEAE-NAVGKI---SASATLTVQ 205 (216)
Q Consensus 178 ~~~d~g~y~C~~~-n~~~~~---~~~~~l~v~ 205 (216)
..+|+|.|+|.+. |..|.. ...+.+.+.
T Consensus 170 ~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~ 201 (315)
T 1itb_B 170 AEKHRGNYTCHASYTYLGKQYPITRVIEFITL 201 (315)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred eehhCcEEEEEEEcCCCCcEEEEEEEEEEEEe
Confidence 9999999999999 777775 445555444
No 174
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.88 E-value=1e-22 Score=147.21 Aligned_cols=176 Identities=18% Similarity=0.194 Sum_probs=128.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+...+....+.+|+.++|.|.+ .+ .+.|++++... ...... ..+.|.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 4 IPVIEPSVPELVVKPGATVTLRCVG-NG----SVEWDGPPSPH-----WTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp CCEEESCCSSCEECTTCCEEEEEEC-SS----CCCBCCCCCSS-----CEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CceecCCCCeEEEcCCCcEEEEEcC-CC----ceEEccCCCCc-----eEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 5777778888899999999999998 44 28999754321 111111 1248999999999999999999887
Q ss_pred CCCcccceeEEEEeecce-EEeCCCceeEeCCCcEEEEEEeCCCCC--cEEEEeeCC-ccCCCC-CeeeecCCeEEEecC
Q psy573 103 AGTRESTDAVLRVLVKPY-IIRGPKDTTVSAGSIIVFECSVGGDAV--LTVHWKRLG-SAMPED-RMSVLPSRSLQLSDV 177 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~-~~~~~~-~~~~~~~~~l~i~~~ 177 (216)
.+.. ...+.|.|..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|++++ ..+... +........|.|.++
T Consensus 74 ~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~ 151 (292)
T 4dkd_C 74 PLGG-SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRA 151 (292)
T ss_dssp ---C-CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTC
T ss_pred CCCc-ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCC
Confidence 6554 5567778877664 355566778899999999999987 44 689999974 333332 333444566999999
Q ss_pred CCCCCeEEEEEEEcCCcce-EEEEEEEEEe----cceee
Q psy573 178 RLEDGGEYVCEAENAVGKI-SASATLTVQS----KYLKV 211 (216)
Q Consensus 178 ~~~d~g~y~C~~~n~~~~~-~~~~~l~v~~----~p~~~ 211 (216)
..+|+|.|+|.+.|..+.. +..+.|.|.. +|.+.
T Consensus 152 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~ 190 (292)
T 4dkd_C 152 KFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALT 190 (292)
T ss_dssp CGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEE
T ss_pred CHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEE
Confidence 9999999999999887764 4478888886 55443
No 175
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.88 E-value=4.6e-22 Score=137.27 Aligned_cols=167 Identities=14% Similarity=0.238 Sum_probs=114.5
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeC--CEEec--------------cccCceEEEec-----CcEEEEcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKN--GHPID--------------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~--~~~~~--------------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
.|....+.+|+.++|.|.+ .+.+ .+.+.||++ +.... .....++.+.. ..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 84 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSV-TGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNS 84 (210)
T ss_dssp EESCSEECTTSCEEEEEEE-ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCCEEecCCCcEEEEEEE-ecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECC
Confidence 3556688999999999998 4443 478999985 22210 01234554432 23899999
Q ss_pred cCCCCCceEEEEEEcCCCCcccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccCC
Q psy573 87 SRKTDDGRYQCVVKNVAGTRESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAMP 160 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~ 160 (216)
++.+|+|.|.|.+.+.. .......|.|.. +|.+...+....+..|+.+.|.|.+.+. |.| .+.|++++..+.
T Consensus 85 v~~~D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~ 162 (210)
T 3d9a_H 85 VTTEDTATYYCANWDGD--YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 162 (210)
T ss_dssp CCGGGCEEEEEEETTSS--CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CCcccCEEEEEEEecCc--ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccc
Confidence 99999999999998753 112335666652 4555443333456789999999999876 777 999999887542
Q ss_pred C---CCe----eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 161 E---DRM----SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 161 ~---~~~----~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
. ... .....+.|.|.....+| |.|+|.|.|..|......
T Consensus 163 ~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 163 VHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp EEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 1 111 11122458888888877 999999999998865443
No 176
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.88 E-value=7e-22 Score=140.36 Aligned_cols=162 Identities=20% Similarity=0.344 Sum_probs=108.8
Q ss_pred cccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCC--E---Eecc-------ccCceEEEec---CcEEEEcccCCCCC
Q psy573 30 QPKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNG--H---PIDF-------ENSKRLRLVD---GTNLAIQDSRKTDD 92 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~--~---~~~~-------~~~~~~~~~~---~~~l~i~~~~~~d~ 92 (216)
.|....+.+|++++|.|.+ .+. +.+.+.||+.. . .+.. ....++.... ..+|.|.+++.+|+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSG-SSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDE 86 (256)
T ss_dssp CCSEEEECTTCCEEEEEEC-CTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred cCCcEEEcCCCcEEEEEec-CCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhC
Confidence 4556789999999999998 444 67899999842 1 1100 1123343322 23799999999999
Q ss_pred ceEEEEEEcCCCC--cccceeEEEEeecc---------------------eEEeCCCceeEeCCCcEEEEEEeCCCC--C
Q psy573 93 GRYQCVVKNVAGT--RESTDAVLRVLVKP---------------------YIIRGPKDTTVSAGSIIVFECSVGGDA--V 147 (216)
Q Consensus 93 g~y~C~~~~~~~~--~~~~~~~l~v~~~p---------------------~~~~~~~~~~~~~g~~~~l~C~~~~~p--~ 147 (216)
|.|.|.+.+..+. .......|.|..++ .+.. +....+.+|+.+.|.|.+.+.+ .
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~ 165 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTFSS 165 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGG
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-CCCeEEcCCCeEEEEEEEeCCcccc
Confidence 9999999985432 12334567776544 2222 3345688999999999998766 7
Q ss_pred cEEEEeeCCc--cCC------------------CCCeeeec-----CCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 148 LTVHWKRLGS--AMP------------------EDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 148 ~~i~W~~~~~--~~~------------------~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+.+.|+++.. .+. ..++.... ...|.|.+++.+|+|.|.|.+.|..
T Consensus 166 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 166 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp SEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 7899998632 110 01222221 1249999999999999999999863
No 177
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.88 E-value=1.9e-21 Score=138.84 Aligned_cols=161 Identities=17% Similarity=0.252 Sum_probs=119.5
Q ss_pred eEEecCCcEEEEeeCCCC-CCCC--eeEEeeCCEEeccccCceEEEecCcEEEEccc---CCCCCce--EEEEEEcCCCC
Q psy573 34 QRVAAGDTALLECGPPRG-HPEP--TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDS---RKTDDGR--YQCVVKNVAGT 105 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~-~~~~--~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~g~--y~C~~~~~~~~ 105 (216)
..+.+|+.++|.|.+ .+ .|.+ .+.|++++..+.. . ....+..+.+..+ +.+|+|. |+|.+.+..+.
T Consensus 13 ~~v~~G~~v~l~C~~-~g~~p~p~~~v~W~k~~~~l~~----~-~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSL-DGLFPVSEAQVHLALGDQRLNP----T-VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp SEEETTEEEEEEEEE-ESCSCGGGCEEEEEETTEECCC----E-EEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred ceEecCCCEEEEEEc-cCCCCCcceEEEEEeCCEECCc----e-EeeCCCeEEEEeecccccccCCcceEEEEEecCCCC
Confidence 478899999999998 44 6666 9999999988732 2 2233446666665 7788885 99999998765
Q ss_pred cccceeEEEEee--cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCe
Q psy573 106 RESTDAVLRVLV--KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGG 183 (216)
Q Consensus 106 ~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 183 (216)
. ...+.|.|.. +|.+. +....+.+|+.+.|.|.+. |.+.+.| ++..+.... ....|.|..+..+|+|
T Consensus 87 ~-~~~~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~----~~~~l~i~~~~~~~~g 155 (265)
T 2oz4_A 87 Q-ETLQTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG----PRAQLLLKATPEDNGR 155 (265)
T ss_dssp E-EEEEEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS----SEECCEEECCGGGTTE
T ss_pred c-EEEEEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC----CcEEEEEccccccCCc
Confidence 4 4567777765 33443 3455788899999999998 8899999 776663321 2255888999999999
Q ss_pred EEEEEEEcCC-cceE---EEEEEEEEecceee
Q psy573 184 EYVCEAENAV-GKIS---ASATLTVQSKYLKV 211 (216)
Q Consensus 184 ~y~C~~~n~~-~~~~---~~~~l~v~~~p~~~ 211 (216)
.|+|.+.|.. |... ..+.|.|..+|.+.
T Consensus 156 ~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~ 187 (265)
T 2oz4_A 156 SFSCSATLEVAGQLIHKNQTRELRVLYGPRLD 187 (265)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEEEEEEEECC
T ss_pred eEEEEEEcCCCCCcccccccEEEEEEeCCccc
Confidence 9999998644 6644 77888888877654
No 178
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.88 E-value=1.9e-21 Score=137.47 Aligned_cols=166 Identities=17% Similarity=0.270 Sum_probs=112.6
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCC-----CCeeEEeeCC--EE---ecc-------ccCceEEEec---CcEEEEc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHP-----EPTLVWKKNG--HP---IDF-------ENSKRLRLVD---GTNLAIQ 85 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~-----~~~~~W~~~~--~~---~~~-------~~~~~~~~~~---~~~l~i~ 85 (216)
.+...|..+.+.+|+.++|.|.+ .+.+ .+.+.||++. .. +.. ....++.... ..+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 81 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRS-SQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKIS 81 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cEEecCCeEEecCCCCEEEEEeC-CCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEEC
Confidence 34556777889999999999998 5555 6899999842 11 100 0123443321 2379999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEeecc-------------eEEeCCCceeEeCCCcEEEEEEeCCCC--CcEE
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKP-------------YIIRGPKDTTVSAGSIIVFECSVGGDA--VLTV 150 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p-------------~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i 150 (216)
+++.+|+|.|.|.+.+..+........|.|..++ .....+....+.+|+.+.|.|.+.+.+ .+.+
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 161 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSM 161 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCE
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEE
Confidence 9999999999999988654322334567776542 122233445688999999999998774 5689
Q ss_pred EEeeCCc--cCC------------------CCCeeeec-----CCeEEEecCCCCCCeEEEEEEEcC
Q psy573 151 HWKRLGS--AMP------------------EDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 151 ~W~~~~~--~~~------------------~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.|+++.. .+. ..+..... ...|.|.+++.+|+|.|.|.+.|.
T Consensus 162 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 162 HWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 9999642 110 12222221 247999999999999999999985
No 179
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.88 E-value=4e-21 Score=133.78 Aligned_cols=169 Identities=14% Similarity=0.210 Sum_probs=114.3
Q ss_pred ccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--E---Eec------------cccCceEEEec-----CcEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--H---PID------------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~---~~~------------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
|..+.+.+|+.++|.|.+ .+.+ .+.+.||+.. . .+. ....+++.+.. +.+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAA-SGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNS 85 (223)
T ss_dssp ECCCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCEEEcCCCcEEEEEEe-cCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECC
Confidence 456789999999999997 4433 4689999853 1 110 01234555432 24799999
Q ss_pred cCCCCCceEEEEEEcCCC----C-cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEee-
Q psy573 87 SRKTDDGRYQCVVKNVAG----T-RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKR- 154 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~----~-~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~- 154 (216)
++.+|+|.|.|.+.+..+ . .......|.|.. +|.+........+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 165 (223)
T 1dee_B 86 LRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYK 165 (223)
T ss_dssp CCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEcc
Confidence 999999999999987642 1 112345677763 4444432222345689999999999876 766 999999
Q ss_pred CCccCCCC--------CeeeecCCeEEEecCCC--CCCeEEEEEEEcCCcceEEEE
Q psy573 155 LGSAMPED--------RMSVLPSRSLQLSDVRL--EDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 155 ~~~~~~~~--------~~~~~~~~~l~i~~~~~--~d~g~y~C~~~n~~~~~~~~~ 200 (216)
++..+... .......+.|.|..... +|.|.|+|.+.|..+.....+
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp TSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 88776430 00111124577877766 789999999999998866544
No 180
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.88 E-value=2.4e-21 Score=134.61 Aligned_cols=165 Identities=16% Similarity=0.275 Sum_probs=113.5
Q ss_pred ccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--E---Eec------------cccCceEEEec-----CcEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--H---PID------------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~---~~~------------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
|..+.+.+|++++|.|.+ .+.+ .+.+.||+.. . .+. ....+++.... +.+|.|.+
T Consensus 7 ~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAA-SGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp ECCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred CCCeEecCCCcEEEEEEe-cCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 445789999999999997 4433 5789999853 1 110 01234555542 24799999
Q ss_pred cCCCCCceEEEEEEcCCCC--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CC--cEEEEeeCCc
Q psy573 87 SRKTDDGRYQCVVKNVAGT--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AV--LTVHWKRLGS 157 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~i~W~~~~~ 157 (216)
++.+|+|.|.|.+.+..+. .......|.|.. +|.+...+ ...+..|+.+.|.|.+.+. |. +.+.|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~ 164 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGK 164 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCS
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCE
Confidence 9999999999999886442 122345677763 34554433 3345689999999999876 65 7899999987
Q ss_pred cCCC--CCeeeec------CCeEEEecCCCCCCeEEEEEEEcCCcceE
Q psy573 158 AMPE--DRMSVLP------SRSLQLSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 158 ~~~~--~~~~~~~------~~~l~i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
.+.. ....... .+.|.|.....+|.|.|+|.+.|..+...
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 165 DITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 6511 0000111 13488888888899999999999988744
No 181
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.88 E-value=2.8e-21 Score=137.90 Aligned_cols=167 Identities=16% Similarity=0.279 Sum_probs=114.3
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCC------CCeeEEeeC--CEE---ecc-------ccCceEEEec---CcEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHP------EPTLVWKKN--GHP---IDF-------ENSKRLRLVD---GTNLA 83 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~------~~~~~W~~~--~~~---~~~-------~~~~~~~~~~---~~~l~ 83 (216)
+.+...|..+.+.+|+.++|.|.+ .+.+ .+.+.||+. +.. +.. ....++.... ..+|.
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~-~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKS-SQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEE-SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEc-CCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 445566777899999999999998 5555 578999985 221 100 1123444332 24799
Q ss_pred EcccCCCCCceEEEEEEcCCCCcccceeEEEEeecc------------------eE-EeCCCceeEeCCCcEEEEEEeCC
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKP------------------YI-IRGPKDTTVSAGSIIVFECSVGG 144 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p------------------~~-~~~~~~~~~~~g~~~~l~C~~~~ 144 (216)
|.+++.+|+|.|.|.+.+..+........|.|..+| .+ ...+....+.+|+++.|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 999999999999999987654322334567776543 11 12223347889999999999987
Q ss_pred CCC--cEEEEeeCC--ccCC------------------CCCeeee-----cCCeEEEecCCCCCCeEEEEEEEcC
Q psy573 145 DAV--LTVHWKRLG--SAMP------------------EDRMSVL-----PSRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 145 ~p~--~~i~W~~~~--~~~~------------------~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.+. +.+.|+++. ..+. ..+.... ....|.|.+++.+|+|.|.|.+.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 763 789999864 2110 1122221 1247999999999999999999985
No 182
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.88 E-value=9.2e-24 Score=148.01 Aligned_cols=170 Identities=17% Similarity=0.206 Sum_probs=96.0
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE--Ee---c-------cccCceEEEe---cCcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH--PI---D-------FENSKRLRLV---DGTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~--~~---~-------~~~~~~~~~~---~~~~l~i~~~~~ 89 (216)
+.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+++. .. . .....++... .+.+|.|.+++.
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCIT-STDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCEEEECSBC-------CCEEEEE-EEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred eeEEEcCCeEEEecCCCEEEEEec-CCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 445556778889999999999997 566667899998531 11 0 0011122111 223799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccCCCC-C
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAMPED-R 163 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~-~ 163 (216)
+|+|.|.|.+.+..+........|.|.. +|.+...+.......|+.+.|.|.+.+. |.+ .+.|++++..+... .
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 182 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 182 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCce
Confidence 9999999999876543323233455543 5655553433334468999999999875 443 79999999876544 1
Q ss_pred eee----------ecCCeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 164 MSV----------LPSRSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 164 ~~~----------~~~~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
... ...+.|.|.....+|+|.|+|.|.|....
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 183 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 110 11135888888889999999999997654
No 183
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.87 E-value=1e-21 Score=138.71 Aligned_cols=171 Identities=13% Similarity=0.211 Sum_probs=116.4
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEee----------------CCEEecc-ccCceEEEec----CcEEEE
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKK----------------NGHPIDF-ENSKRLRLVD----GTNLAI 84 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~----------------~~~~~~~-~~~~~~~~~~----~~~l~i 84 (216)
.+...|..+.+.+|+.++|.|.+ .+.+.+.+.||+ ++..... ....++.... ..+|.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 81 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 81 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEE-SSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEE
T ss_pred ccEECCcEEEEeCCCcEEEEeEe-cCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEE
Confidence 45566777899999999999988 666888999998 2221111 1113444332 347999
Q ss_pred cccCCCCCceEEEEEEcCCC---CcccceeEEEEee------cceEE-eCCCceeEeCCCcEEEEEEeCCCCCc--EEEE
Q psy573 85 QDSRKTDDGRYQCVVKNVAG---TRESTDAVLRVLV------KPYII-RGPKDTTVSAGSIIVFECSVGGDAVL--TVHW 152 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~---~~~~~~~~l~v~~------~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W 152 (216)
.+++.+|+|.|.|.+.+..+ ........|.|.. +|.+. ..+....+..|+.+.|.|.+.+.+++ .+.|
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 161 (246)
T 4dzb_B 82 TSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 161 (246)
T ss_dssp CSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEE
Confidence 99999999999999986532 1122344666653 44443 33344455669999999999886654 8999
Q ss_pred eeCCccCCCCCeeee---------cC------CeEEEecCCCCC-CeEEEEEEEcCCcceE
Q psy573 153 KRLGSAMPEDRMSVL---------PS------RSLQLSDVRLED-GGEYVCEAENAVGKIS 197 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~---------~~------~~l~i~~~~~~d-~g~y~C~~~n~~~~~~ 197 (216)
++++..+........ .+ ..|.|.....+| .|.|+|.|.|......
T Consensus 162 ~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 162 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 999887754321110 12 237788887778 9999999999876533
No 184
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.87 E-value=3.2e-21 Score=139.49 Aligned_cols=180 Identities=17% Similarity=0.263 Sum_probs=118.6
Q ss_pred EecccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EE---ec------------cccCceEEEec-----CcEEE
Q psy573 28 RVQPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HP---ID------------FENSKRLRLVD-----GTNLA 83 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~---~~------------~~~~~~~~~~~-----~~~l~ 83 (216)
...|..+.+.+|++++|.|.+ .+.+ .+.+.||+.. .. +. .....++.... ..+|.
T Consensus 26 v~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 104 (291)
T 2gki_A 26 LQQSGPELVKPGASVKMSCKA-SGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYME 104 (291)
T ss_dssp EEECCCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEE
T ss_pred EEcCCcEEecCCCCEEEEEec-cCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEE
Confidence 345667889999999999997 4544 5789999853 11 10 01123333321 34799
Q ss_pred EcccCCCCCceEEEEEEcCC-C--C-cccceeEEEEee----------------cceEEeCCCceeEeCCCcEEEEEEeC
Q psy573 84 IQDSRKTDDGRYQCVVKNVA-G--T-RESTDAVLRVLV----------------KPYIIRGPKDTTVSAGSIIVFECSVG 143 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~-~--~-~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~ 143 (216)
|.+++.+|+|.|.|.+.+.. + . .......|.|.. ++.+...+....+.+|+++.|.|.+.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 184 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSS 184 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEES
T ss_pred ECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcC
Confidence 99999999999999998763 1 1 112234666665 23344455667889999999999998
Q ss_pred CCCCc------EEEEeeCC--ccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc-eEE
Q psy573 144 GDAVL------TVHWKRLG--SAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK-ISA 198 (216)
Q Consensus 144 ~~p~~------~i~W~~~~--~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~-~~~ 198 (216)
+.+.+ .+.|+++. ..+. ..++... ....|.|.+++.+|+|.|.|.+.|.... ...
T Consensus 185 ~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~ 264 (291)
T 2gki_A 185 QSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGS 264 (291)
T ss_dssp SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred CccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcC
Confidence 88765 89999963 2111 1222221 1246999999999999999999985432 222
Q ss_pred EEEEEEEecc
Q psy573 199 SATLTVQSKY 208 (216)
Q Consensus 199 ~~~l~v~~~p 208 (216)
-..|.|+..+
T Consensus 265 gt~l~v~~~~ 274 (291)
T 2gki_A 265 GTKLEIKHHH 274 (291)
T ss_dssp CEEEEEECC-
T ss_pred CEEEEEEeeE
Confidence 3345555444
No 185
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.87 E-value=5.7e-22 Score=151.02 Aligned_cols=170 Identities=19% Similarity=0.248 Sum_probs=119.9
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCC----CeeEEeeCC--EEec----------cccCceEEEe---cCcEEEEccc
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPE----PTLVWKKNG--HPID----------FENSKRLRLV---DGTNLAIQDS 87 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~----~~~~W~~~~--~~~~----------~~~~~~~~~~---~~~~l~i~~~ 87 (216)
+...|..+.+.+|+.++|.|.+ .+.+. +.+.||+++ ..+. .....++... ....|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRA-SESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPV 82 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSC
T ss_pred eEecCCeEEeeCCCCEEEEEec-CCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCC
Confidence 4455777889999999999997 55554 489999963 2110 0112344332 1247999999
Q ss_pred CCCCCceEEEEEEcCCCCcccceeEEEEee---cceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeCCccCCCC
Q psy573 88 RKTDDGRYQCVVKNVAGTRESTDAVLRVLV---KPYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRLGSAMPED 162 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~ 162 (216)
+.+|+|.|+|.+.+..+........+.|.. +|.+...+.......|+.+.|.|.+.+ .|.+ .+.|++++..+...
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 162 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 162 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCC
Confidence 999999999999987664334445666653 555554333333446789999999976 5666 89999999876544
Q ss_pred Cee-----------eecCCeEEEecCCCCCCeEEEEEEEcCCcceE
Q psy573 163 RMS-----------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 163 ~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
... ....+.|.|.++..+|+|.|+|.+.|..+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 208 (438)
T 1qgc_4 163 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 208 (438)
T ss_dssp EEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred ceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCc
Confidence 110 11124689999999999999999999988743
No 186
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.87 E-value=1.9e-21 Score=139.91 Aligned_cols=176 Identities=14% Similarity=0.265 Sum_probs=114.4
Q ss_pred ccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCCE--Ee---------------ccccCceEEEecC-----cEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNGH--PI---------------DFENSKRLRLVDG-----TNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~~--~~---------------~~~~~~~~~~~~~-----~~l~i~~ 86 (216)
|..+.+.+|++++|.|.+ .+. +.+.+.||+... .. ......++....+ .+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTS-SEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCEECTTCCEEEEEEE-CCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEe-eccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 677889999999999998 443 557899998421 10 0111234443311 3799999
Q ss_pred cCCCCCceEEEEEEcC--------CCCcccceeEEEEee---------------cceEEeCCCceeEeCCCcEEEEEEeC
Q psy573 87 SRKTDDGRYQCVVKNV--------AGTRESTDAVLRVLV---------------KPYIIRGPKDTTVSAGSIIVFECSVG 143 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~--------~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~ 143 (216)
++.+|+|.|.|.+.+. ..........|.|.. ++.+...+. ..+.+|+++.|.|.+.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~ 164 (280)
T 3fku_X 86 LRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGN 164 (280)
T ss_dssp CCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECC
T ss_pred CChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEec
Confidence 9999999999999876 112223345666665 344444444 7888999999999998
Q ss_pred C-CC-CcEEEEeeCC--ccCC-------------CCCeeee---cCCeEEEecCCCCCCeEEEEEEEcCCcc---eEEEE
Q psy573 144 G-DA-VLTVHWKRLG--SAMP-------------EDRMSVL---PSRSLQLSDVRLEDGGEYVCEAENAVGK---ISASA 200 (216)
Q Consensus 144 ~-~p-~~~i~W~~~~--~~~~-------------~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~~~---~~~~~ 200 (216)
+ .+ .+.+.|++.. ..+. ..++... ....|.|.+++.+|+|.|.|.+.|..+. ....+
T Consensus 165 ~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t 244 (280)
T 3fku_X 165 SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGT 244 (280)
T ss_dssp CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCC
T ss_pred CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCE
Confidence 7 33 4789998742 2111 1122221 1135999999999999999999987622 23334
Q ss_pred EEEEEecc
Q psy573 201 TLTVQSKY 208 (216)
Q Consensus 201 ~l~v~~~p 208 (216)
.|.|...|
T Consensus 245 ~l~V~~~~ 252 (280)
T 3fku_X 245 KLTVLGQP 252 (280)
T ss_dssp EEEEC---
T ss_pred EEEECCCC
Confidence 56665433
No 187
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.87 E-value=2.5e-21 Score=134.98 Aligned_cols=165 Identities=17% Similarity=0.253 Sum_probs=111.3
Q ss_pred ccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEec---------------cccCceEEEec-----CcEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPID---------------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
|....+.+|++++|.|.+ .+.+ .+.+.||+.. .... .....++.... +.+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGV-SNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp ECCEEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeEecCCCCEEEEEEe-cCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 455789999999999998 4444 5789999853 2110 01234555442 35799999
Q ss_pred cCCCCCceEEEEEEcCCC-----C--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEe
Q psy573 87 SRKTDDGRYQCVVKNVAG-----T--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWK 153 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~-----~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~ 153 (216)
++.+|+|.|.|.+.+..+ . .......|.|.. +|.+........+..|+.+.|.|.+.+. |.+ .+.|+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 999999999999998653 1 112345677764 3444332222235679999999999876 666 99999
Q ss_pred eCCccCCCC---Cee-----eecCCeEEEecCCCCCCeEEEEEEEcCCcceE
Q psy573 154 RLGSAMPED---RMS-----VLPSRSLQLSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 154 ~~~~~~~~~---~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
+++..+... ... ....+.|.|.....+| |.|+|.|.|..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 988653211 010 1112358888888888 999999999776544
No 188
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.87 E-value=5e-22 Score=151.33 Aligned_cols=189 Identities=17% Similarity=0.243 Sum_probs=122.4
Q ss_pred hhceeeEEe--eccceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEE--------ecCcEE
Q psy573 14 EKKKLKIEM--LREEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRL--------VDGTNL 82 (216)
Q Consensus 14 ~~~~l~v~~--~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~--------~~~~~l 82 (216)
..+.|.|.. .+|.+.+.+......+|+.+.|.|.+....|.+ .+.|++++..+.......... ...+.|
T Consensus 104 ~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L 183 (438)
T 1qgc_4 104 AGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTL 183 (438)
T ss_dssp CCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEE
T ss_pred CceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEE
Confidence 345566643 245555544333345688999999983335666 899999998874321000111 012369
Q ss_pred EEcccCCCCCceEEEEEEcCCCCcccceeEEEEee--cceEEeCCCceeEeCCCcEEEEEEeCCCC--CcEEEEeeC--C
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV--KPYIIRGPKDTTVSAGSIIVFECSVGGDA--VLTVHWKRL--G 156 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~--~ 156 (216)
.|.++..+|+|.|+|.+.+..+.. .+.+.+.. .+.....+....+.+|+.+.|.|.+.+.| .+.+.|+++ +
T Consensus 184 ~i~~~~~~d~G~Y~C~a~n~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g 260 (438)
T 1qgc_4 184 TLTKDEYERHNSYTCEATHKTSTS---PIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPE 260 (438)
T ss_dssp EEEHHHHHTCCEEEEEEEETTCSS---CEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETT
T ss_pred EEeCcccCCCCeEEEEEEecccCC---ceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCC
Confidence 999999999999999999976653 22333322 22222334566788999999999999887 678999986 3
Q ss_pred ccCC------------------CCCeeeec-----CCeEEEecCCCCCCeEEEEEEEcCCc-----ceEEEEEEEEE
Q psy573 157 SAMP------------------EDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAENAVG-----KISASATLTVQ 205 (216)
Q Consensus 157 ~~~~------------------~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n~~~-----~~~~~~~l~v~ 205 (216)
..+. ..+..... ...|.|.+++.+|+|.|+|.+.|..+ .......|.|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~ 337 (438)
T 1qgc_4 261 KRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVS 337 (438)
T ss_dssp TEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEEC
T ss_pred CCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEe
Confidence 3221 12332221 23799999999999999999998443 22233456665
No 189
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.87 E-value=2.8e-21 Score=138.13 Aligned_cols=169 Identities=18% Similarity=0.266 Sum_probs=114.5
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEe-------------ccccC-ceEEEec----CcEEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPI-------------DFENS-KRLRLVD----GTNLAI 84 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~-------------~~~~~-~~~~~~~----~~~l~i 84 (216)
+.+...|..+.+.+|++++|.|.+ . .+.+.+.||+. +... ..... +++.... +.+|.|
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDP-I-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBC-B-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred ceeEeCCCEEEecCCCCEEEEEEe-C-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 456666777899999999999997 3 57789999982 2111 00111 4555543 457999
Q ss_pred cccCCCCCceEEEEEEcCC-CCcccceeEEEEee------cceEEe-CCCceeEeCCCcEEEEEEeCCCCCc--EEEEee
Q psy573 85 QDSRKTDDGRYQCVVKNVA-GTRESTDAVLRVLV------KPYIIR-GPKDTTVSAGSIIVFECSVGGDAVL--TVHWKR 154 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~-~~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~ 154 (216)
.+++.+|+|.|+|.+.+.. .........|.|.. +|.+.. .+....+..|+.+.|.|.+.+.+++ .+.|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 9999999999999999742 22223344666654 454433 3344455568999999999886554 899999
Q ss_pred CCccCCCCCee---------------eecCCeEEEecCCCCC-CeEEEEEEEcCCcc
Q psy573 155 LGSAMPEDRMS---------------VLPSRSLQLSDVRLED-GGEYVCEAENAVGK 195 (216)
Q Consensus 155 ~~~~~~~~~~~---------------~~~~~~l~i~~~~~~d-~g~y~C~~~n~~~~ 195 (216)
++..+...... ......|.|.....+| +|.|+|.+.|....
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 98877543111 1111346777776666 99999999988654
No 190
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.87 E-value=9.4e-21 Score=132.68 Aligned_cols=175 Identities=15% Similarity=0.190 Sum_probs=111.4
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--E---Eec-----------cccCceEEEec-----CcEEEEcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--H---PID-----------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~---~~~-----------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
.|..+.+.+|++++|.|.+ .+.+ .+.+.||+.. . .+. ....+++.... +.+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAV-YGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSS 84 (232)
T ss_dssp EECCCEECTTSCEEEEEEE-ESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCEEEeCCCcEEEEEEE-ccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECC
Confidence 3455789999999999997 4433 5789999852 1 110 01234555432 23899999
Q ss_pred cCCCCCceEEEEEEcCC--CC---cccceeEEEEee----cceEEeCCCceeEeCC-CcEEEEEEeCCC-CCc-EEEEee
Q psy573 87 SRKTDDGRYQCVVKNVA--GT---RESTDAVLRVLV----KPYIIRGPKDTTVSAG-SIIVFECSVGGD-AVL-TVHWKR 154 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~--~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~i~W~~ 154 (216)
++.+|+|.|.|.+.... +. .......|.|.. +|.+........+..| +.+.|.|.+.+. |.+ .+.|++
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~ 164 (232)
T 1dn0_B 85 VTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKY 164 (232)
T ss_dssp CCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEE
T ss_pred CCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEc
Confidence 99999999999998421 11 122345777764 2444322222234577 899999999876 766 999999
Q ss_pred -CCccCCCC----C----eeeecCCeEEEecCCC--CCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 155 -LGSAMPED----R----MSVLPSRSLQLSDVRL--EDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 155 -~~~~~~~~----~----~~~~~~~~l~i~~~~~--~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
++..+... . ......+.|.|..... +|.|.|+|.+.|..+.......+.+.
T Consensus 165 ~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 165 KNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp TTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred CCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 88765430 0 0111224578888776 78999999999999887666655544
No 191
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.87 E-value=3.2e-21 Score=137.92 Aligned_cols=168 Identities=20% Similarity=0.301 Sum_probs=111.9
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCC-----CCeeEEeeCC--E---Eecc-------ccCceEEEe---cCcEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHP-----EPTLVWKKNG--H---PIDF-------ENSKRLRLV---DGTNLA 83 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-----~~~~~W~~~~--~---~~~~-------~~~~~~~~~---~~~~l~ 83 (216)
.+.+...|..+.+.+|++++|.|.+ .+.+ .+.+.||+.. . .+.. ....++... ...+|.
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRS-SQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEe-cCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 4566667778889999999999998 4544 4789999853 2 1110 012344433 124799
Q ss_pred EcccCCCCCceEEEEEEcCCCCcccceeEEEEeecce-----------------------EEeCCCceeEeCCCcEEEEE
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPY-----------------------IIRGPKDTTVSAGSIIVFEC 140 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-----------------------~~~~~~~~~~~~g~~~~l~C 140 (216)
|.+++.+|+|.|.|.+.+..+........|.|...+. ....+....+.+|+.+.|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 9999999999999999876543222334555554321 12223456788999999999
Q ss_pred EeCCCCC--cEEEEeeCC--ccC--------------------CCCCeeeec-----CCeEEEecCCCCCCeEEEEEEEc
Q psy573 141 SVGGDAV--LTVHWKRLG--SAM--------------------PEDRMSVLP-----SRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 141 ~~~~~p~--~~i~W~~~~--~~~--------------------~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
.+.+.+. +.+.|+++. ..+ ...+..... ...|.|.+++.+|+|.|.|.+.+
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 9987653 789999853 111 112333221 24699999999999999999987
Q ss_pred C
Q psy573 192 A 192 (216)
Q Consensus 192 ~ 192 (216)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 4
No 192
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.86 E-value=3.1e-20 Score=129.07 Aligned_cols=163 Identities=18% Similarity=0.312 Sum_probs=109.9
Q ss_pred ccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCC--EE---e--------------ccccCceEEEecC-----cEEEE
Q psy573 31 PKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNG--HP---I--------------DFENSKRLRLVDG-----TNLAI 84 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~--~~---~--------------~~~~~~~~~~~~~-----~~l~i 84 (216)
|..+.+.+|+.++|.|.+ .+. +.+.+.||+.. .. + .....+++....+ .+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAA-SGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp ESCEEECTTCCEEEEEEE-ESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred cCCEEEcCCCCEEEEEEc-ccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 445678999999999998 432 35789999742 11 1 0112345554322 26999
Q ss_pred cccCCCCCceEEEEEEcCCC-CcccceeEEEEe----ecceEE-eCCCceeEeCCCcEEEEEEeCC-CCC--cEEEEeeC
Q psy573 85 QDSRKTDDGRYQCVVKNVAG-TRESTDAVLRVL----VKPYII-RGPKDTTVSAGSIIVFECSVGG-DAV--LTVHWKRL 155 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~-~~~~~~~~l~v~----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~--~~i~W~~~ 155 (216)
.+++.+|+|.|.|.+.+... ........|.|. .+|.+. ..+... ..|+.+.|.|.+.+ .|. +.+.|+++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~ 163 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSES 163 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEEC
Confidence 99999999999999987641 222334566665 234443 222222 68999999999987 565 48999999
Q ss_pred CccCCC---------CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 156 GSAMPE---------DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 156 ~~~~~~---------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
+..+.. ........+.|.|.....+|+|.|+|.|.|..+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 164 GQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp STTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 876621 11111122458899999999999999999987653
No 193
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.86 E-value=2.4e-21 Score=136.71 Aligned_cols=170 Identities=17% Similarity=0.226 Sum_probs=113.0
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EEe---c---------cccCceEEEe----cCcEEEEcccC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HPI---D---------FENSKRLRLV----DGTNLAIQDSR 88 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~~---~---------~~~~~~~~~~----~~~~l~i~~~~ 88 (216)
+...|..+.+.+|+.++|.|.+ .+.+.+.+.||+.. ... . .....++.+. .+.+|.|.+++
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTV-EGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEE-ESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeCCCceEEecCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 4456777899999999999998 66688899999831 110 0 0112233322 23479999999
Q ss_pred CCCCceEEEEEEcCC-----CCcccceeEEEEee------cceEEe-CCCceeEeCCCcEEEEEEeCCC-CCc-EEEEee
Q psy573 89 KTDDGRYQCVVKNVA-----GTRESTDAVLRVLV------KPYIIR-GPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKR 154 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~-----~~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~ 154 (216)
.+|+|.|.|.+.+.. .........|.|.. +|.+.. .+....+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 999999999999822 22223345666664 454433 2233334558999999999875 434 789999
Q ss_pred CCccCCCCCee---------------eecCCeEEEecCCCCC-CeEEEEEEEcCCcceE
Q psy573 155 LGSAMPEDRMS---------------VLPSRSLQLSDVRLED-GGEYVCEAENAVGKIS 197 (216)
Q Consensus 155 ~~~~~~~~~~~---------------~~~~~~l~i~~~~~~d-~g~y~C~~~n~~~~~~ 197 (216)
++..+...... ......|.|.....+| +|.|+|.+.|......
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 163 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp TTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 99877543211 1111357777777777 7799999999876533
No 194
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.86 E-value=7.3e-21 Score=132.89 Aligned_cols=169 Identities=15% Similarity=0.207 Sum_probs=112.4
Q ss_pred ccceEEecCCcEEEEeeCCCCCCC----CeeEEeeCC--EE---ec-----------cccCceEEEec-----CcEEEEc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPE----PTLVWKKNG--HP---ID-----------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~----~~~~W~~~~--~~---~~-----------~~~~~~~~~~~-----~~~l~i~ 85 (216)
|..+.+.+|+.++|.|.+ .+.+. +.+.||+.. .. +. ....+++.+.. +.+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSF-SGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKIT 85 (228)
T ss_dssp ECCSEECTTCCEEEEEEE-ESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEEC
T ss_pred CCceeecCCCeEEEEEEE-eCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEc
Confidence 456789999999999998 55553 789999842 21 10 01234555432 2589999
Q ss_pred ccCCCCCceEEEEEEcCCC------C--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEE
Q psy573 86 DSRKTDDGRYQCVVKNVAG------T--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVH 151 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~ 151 (216)
+++.+|+|.|.|.+.+..+ . .......|.|.. +|.+...+....+..|+.+.|.|.+.+. |.+ .+.
T Consensus 86 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 86 SVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp SCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEE
Confidence 9999999999999987653 1 112335677763 4555443333346789999999999876 777 999
Q ss_pred EeeCCccCCCCCe-------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 152 WKRLGSAMPEDRM-------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 152 W~~~~~~~~~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
|++++..+..... .....+.|.|.....++ |.|+|.+.|..+.......
T Consensus 166 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 166 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp EGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 9998865421100 11123458888888766 9999999999987665444
No 195
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.86 E-value=1.7e-22 Score=140.28 Aligned_cols=171 Identities=15% Similarity=0.190 Sum_probs=110.0
Q ss_pred ccceEecccceE--EecCCcEEEEeeCCCCC---C-CCeeEEeeCCEEeccccCceEEE------ecCcEEEEcccCCCC
Q psy573 24 REEFRVQPKSQR--VAAGDTALLECGPPRGH---P-EPTLVWKKNGHPIDFENSKRLRL------VDGTNLAIQDSRKTD 91 (216)
Q Consensus 24 ~~~~~~~~~~~~--~~~G~~~~l~C~~~~~~---~-~~~~~W~~~~~~~~~~~~~~~~~------~~~~~l~i~~~~~~d 91 (216)
+|.+.+.+.... +.+|+.++|.|.+ .+. + .+.+.||+++..+.......... ...+.|.|.+++.+|
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~-~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVV-VDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEE-EEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEE-cCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 355555555544 7899999999998 444 3 37999999997763211100000 112469999999999
Q ss_pred CceEEEEEEcCCCCc-ccceeE--EEEeecceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeCCccCCCCC---
Q psy573 92 DGRYQCVVKNVAGTR-ESTDAV--LRVLVKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRLGSAMPEDR--- 163 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~-~~~~~~--l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~--- 163 (216)
+|.|+|.+.+..+.. ....+. +.+..+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|++++..+....
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecc
Confidence 999999999876532 111121 13445666654443333335899999999988 5655 899999998764321
Q ss_pred eeeecCCe------EEEecCCCCCCeEEEEEEEcCCcc
Q psy573 164 MSVLPSRS------LQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 164 ~~~~~~~~------l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
.....+++ |.+.....+|.|.|+|.|.|....
T Consensus 168 ~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 168 PVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 11122333 344444444689999999998765
No 196
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.86 E-value=3.7e-21 Score=133.18 Aligned_cols=173 Identities=16% Similarity=0.205 Sum_probs=109.3
Q ss_pred cccceEEecCCcEEEEeeCCC-CCCCCeeEEeeCC--EE---e-----------ccccCceEEEec---CcEEEEcccCC
Q psy573 30 QPKSQRVAAGDTALLECGPPR-GHPEPTLVWKKNG--HP---I-----------DFENSKRLRLVD---GTNLAIQDSRK 89 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~~~--~~---~-----------~~~~~~~~~~~~---~~~l~i~~~~~ 89 (216)
.|.++.+.+|++++|.|.+.. ..+.+.+.||+.. .. + .....+++.... ..+|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 455678999999999998722 1345789999742 11 1 011233444432 23699999999
Q ss_pred CCCceEEEEEEcCCCC---cccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCCCC--cEEEEeeCCccCC
Q psy573 90 TDDGRYQCVVKNVAGT---RESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGDAV--LTVHWKRLGSAMP 160 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~ 160 (216)
+|+|.|.|.+.+..+. .......|.|. .+|.+...+....+..|+.+.|.|.+.+.++ ..+.|++++..+.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 9999999999876542 12334566775 4555553333345667999999999987643 3688999887543
Q ss_pred CC--CeeeecCCeEEE---ecCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy573 161 ED--RMSVLPSRSLQL---SDVRLEDGGEYVCEAENAVGKISASATLT 203 (216)
Q Consensus 161 ~~--~~~~~~~~~l~i---~~~~~~d~g~y~C~~~n~~~~~~~~~~l~ 203 (216)
.. ......++.+.+ ..+...| |.|+|.|.|..+.......|.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 165 VRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred eEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 21 111223444444 4566777 999999999998876665553
No 197
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.86 E-value=2.2e-20 Score=131.38 Aligned_cols=169 Identities=14% Similarity=0.195 Sum_probs=113.7
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--------------CEEe-ccccCceEEEec----CcEEEEc
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--------------GHPI-DFENSKRLRLVD----GTNLAIQ 85 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--------------~~~~-~~~~~~~~~~~~----~~~l~i~ 85 (216)
..+...|..+.+.+|+.++|.|.+ .+ +.+.+.||+. +... ......++.... +.+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 80 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIP-IS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMS 80 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEEC-CT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEEC
T ss_pred cccccCcceeeecCCCcEEEEEEe-CC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEEC
Confidence 345566777899999999999998 43 7789999982 1111 111223444432 3479999
Q ss_pred ccCCCCCceEEEEEEcC--CCCcccceeEEEEe------ecceEEe-CCCceeEeCCCcEEEEEEeCC-CCCc-EEEEee
Q psy573 86 DSRKTDDGRYQCVVKNV--AGTRESTDAVLRVL------VKPYIIR-GPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKR 154 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~--~~~~~~~~~~l~v~------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~ 154 (216)
+++.+|+|.|.|.+.+. ..........+.|. .+|.+.. .+....+..|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 160 (240)
T 3q5y_A 81 ALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV 160 (240)
T ss_dssp SCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred cCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEE
Confidence 99999999999999732 22222334556665 3444443 334445556899999999987 4555 799999
Q ss_pred CCccCCCCCee-----eecC------CeEEEecCCCCC-CeEEEEEEEcCCcc
Q psy573 155 LGSAMPEDRMS-----VLPS------RSLQLSDVRLED-GGEYVCEAENAVGK 195 (216)
Q Consensus 155 ~~~~~~~~~~~-----~~~~------~~l~i~~~~~~d-~g~y~C~~~n~~~~ 195 (216)
++..+...... ...+ +.|.|.....+| +|.|+|.+.|....
T Consensus 161 ~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 161 NGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 99877543211 1112 248888888888 77999999987654
No 198
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.86 E-value=1.7e-20 Score=132.32 Aligned_cols=169 Identities=17% Similarity=0.211 Sum_probs=114.2
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--------------CEEecc-ccC-ceEEEec----CcEEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--------------GHPIDF-ENS-KRLRLVD----GTNLAI 84 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--------------~~~~~~-~~~-~~~~~~~----~~~l~i 84 (216)
+.+...|..+.+.+|+.++|.|. .+.+.+.+.||+. +..... ... .++.... +.+|.|
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 80 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNCD--PVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKI 80 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEEE--CCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEE
T ss_pred cceEeCCceEEecCCCCEEEEEE--cCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEE
Confidence 45566777789999999999994 4667889999981 211111 111 4555443 237999
Q ss_pred cccCCCCCceEEEEEEcCC---CCcccceeEEEEe------ecceEE-eCCCceeEeCCCcEEEEEEeCCC-CCc-EEEE
Q psy573 85 QDSRKTDDGRYQCVVKNVA---GTRESTDAVLRVL------VKPYII-RGPKDTTVSAGSIIVFECSVGGD-AVL-TVHW 152 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~---~~~~~~~~~l~v~------~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W 152 (216)
.+++.+|+|.|.|.+.+.. .........|.|. .+|.+. ..+....+..|+.+.|.|.+.+. |.+ .+.|
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp CSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 9999999999999998532 1222334566665 345443 33344455669999999999874 444 8999
Q ss_pred eeCCccCCCCCee---------------eecCCeEEEecCCCCC-CeEEEEEEEcCCcc
Q psy573 153 KRLGSAMPEDRMS---------------VLPSRSLQLSDVRLED-GGEYVCEAENAVGK 195 (216)
Q Consensus 153 ~~~~~~~~~~~~~---------------~~~~~~l~i~~~~~~d-~g~y~C~~~n~~~~ 195 (216)
++++..+...... ......|.|.....+| +|.|+|.+.|....
T Consensus 161 ~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 9999877543211 1111347788877777 99999999987654
No 199
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.86 E-value=3.6e-21 Score=142.37 Aligned_cols=165 Identities=15% Similarity=0.260 Sum_probs=113.5
Q ss_pred cccceEEecCCcEEEEeeCCCCC--CCCeeEEeeC--CEEec---------------cccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGH--PEPTLVWKKN--GHPID---------------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~--~~~~~---------------~~~~~~~~~~~-----~~~l~i~ 85 (216)
.|..+.+.+|+.++|.|.+ .+. +.+.+.||++ +..+. .....++.+.. ..+|.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKA-SGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp ECCCEEECTTCCEEEEEEE-ESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCCCeEEeCCCcEEEEEEc-CCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 3456789999999999998 443 3678999986 33221 01234555432 2479999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccC
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAM 159 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~ 159 (216)
+++.+|+|.|.|.+.+..+. ......|.|. .+|.+...+....+..|+.+.|.|.+.+. |. +.+.|++++..+
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 163 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAY-WGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 163 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCE-ECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCT
T ss_pred CCCcccCEEEEEEEecCcce-ecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccC
Confidence 99999999999999884332 2334567776 34555443333446789999999999876 54 699999998753
Q ss_pred CCC---C-----eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceE
Q psy573 160 PED---R-----MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 160 ~~~---~-----~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
... . ......+.|.|..+..+| |.|+|.+.|..+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 208 (344)
T 1za6_B 164 GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 208 (344)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEE
T ss_pred ceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 210 0 011112368888888878 999999999988643
No 200
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.85 E-value=7.1e-21 Score=134.12 Aligned_cols=176 Identities=16% Similarity=0.198 Sum_probs=115.2
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCC--E---Eecc-----------c-cCceEEEe-----cCcE
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNG--H---PIDF-----------E-NSKRLRLV-----DGTN 81 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~--~---~~~~-----------~-~~~~~~~~-----~~~~ 81 (216)
.+...|..+.+.+|+.++|.|.+ .+. +.+.+.||+.. . .+.. . ..+++.+. .+.+
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVV-SGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEE-ESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEe-CCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 45556778899999999999997 343 56789999843 1 1100 0 34455543 2347
Q ss_pred EEEcccCCCCCceEEEEEEcCCC-C-----cccceeEEEEeec-------ceEEeC-CCceeEeCCCcEEEEEEeCCC-C
Q psy573 82 LAIQDSRKTDDGRYQCVVKNVAG-T-----RESTDAVLRVLVK-------PYIIRG-PKDTTVSAGSIIVFECSVGGD-A 146 (216)
Q Consensus 82 l~i~~~~~~d~g~y~C~~~~~~~-~-----~~~~~~~l~v~~~-------p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p 146 (216)
|.|.+++.+|+|.|.|.+.+... . .......|.|... |..... +....+..|+.+.|.|.+.+. |
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESS
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEEC
Confidence 99999999999999999987531 1 1123456777652 322222 333345579999999999876 5
Q ss_pred C-cEEEEeeCCc-cCCCCC---eeee-----cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 147 V-LTVHWKRLGS-AMPEDR---MSVL-----PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 147 ~-~~i~W~~~~~-~~~~~~---~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
. +.+.|++++. .+.... .... ..+.|.|..... + |.|+|.+.|..+.......+.+
T Consensus 162 ~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 162 DVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 4 7899999987 453221 1111 113577776654 4 9999999999887544444444
No 201
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.85 E-value=8.7e-20 Score=147.93 Aligned_cols=196 Identities=15% Similarity=0.182 Sum_probs=124.8
Q ss_pred hhhceeeEEeeccceE----ecccceEEecC--CcEEEEeeCCCCCCCCeeEEeeC--CEEeccccCceEEEecCcEEEE
Q psy573 13 EEKKKLKIEMLREEFR----VQPKSQRVAAG--DTALLECGPPRGHPEPTLVWKKN--GHPIDFENSKRLRLVDGTNLAI 84 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~----~~~~~~~~~~G--~~~~l~C~~~~~~~~~~~~W~~~--~~~~~~~~~~~~~~~~~~~l~i 84 (216)
+..+.|.|.+..+.+. ..+....+.+| +.++|.|.+ .+ |.+.+.|+++ +..+..... .........|.|
T Consensus 111 ~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~-~~-p~~~v~w~~~~~~~~~~~~~~-~~~~~~~~~l~i 187 (772)
T 3v2a_R 111 ASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLG-SI-SNLNVSLCARYPEKRFVPDGN-RISWDSKKGFTI 187 (772)
T ss_dssp ---------------------CEEEEEEESSCCCEEEECCCC-SC-SSCCEEEEEETTTEEECCCSS-SCEEETTTEEEE
T ss_pred EEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccC-CC-CCcEEEEEecCCCccccCCCc-eeecCCCCCeEe
Confidence 3445555553322222 23456778889 889999998 33 7789999997 665533222 223345678999
Q ss_pred cccCCCCCceEEEEEEcCCCCcccceeEEEEee--cceEEeCC-CceeEeCCCcEEEEEEeCC--CCCcEEEEeeCCccC
Q psy573 85 QDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV--KPYIIRGP-KDTTVSAGSIIVFECSVGG--DAVLTVHWKRLGSAM 159 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~-~~~~~~~g~~~~l~C~~~~--~p~~~i~W~~~~~~~ 159 (216)
.+++.+|+|.|+|.+.+......+....+.+.. .+.+...+ ....+.+|+.+.|.|.+.+ .+.+.+.|++++..+
T Consensus 188 ~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~ 267 (772)
T 3v2a_R 188 PSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 267 (772)
T ss_dssp EGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC----
T ss_pred cCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccC
Confidence 999999999999999975443333333444433 23333333 3468999999999999976 456789999998765
Q ss_pred CCCCee------------eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceee
Q psy573 160 PEDRMS------------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 160 ~~~~~~------------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
...... ......|.|.++..+|+|.|+|.+.|..+.....+.|.|..+|.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~ 331 (772)
T 3v2a_R 268 QHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVA 331 (772)
T ss_dssp ----CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC--
T ss_pred CCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeE
Confidence 432111 1123579999999999999999999999988888999998877543
No 202
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.2e-20 Score=130.62 Aligned_cols=181 Identities=16% Similarity=0.230 Sum_probs=127.8
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe---cCcEEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV---DGTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.+ ..+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++... ..+.|.|.++..+|+|.|.|.+
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEV-FAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEE-EEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEE-eecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 45666 57777899999999999998 7888899999999998865443444443 2468999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeC----CCCCc--EEEEeeCCccCCCCCe-eee---cC
Q psy573 100 KNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVG----GDAVL--TVHWKRLGSAMPEDRM-SVL---PS 169 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~i~W~~~~~~~~~~~~-~~~---~~ 169 (216)
.|..+.. ...+.+.+...|...... .....+..+.|.|... +.|.. .+.|.+++...-.... ... ..
T Consensus 96 ~n~~g~~-~~~~~l~v~~~P~~p~~~--~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~ 172 (215)
T 3mtr_A 96 VNRIGQE-SLEFILVQADTPSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172 (215)
T ss_dssp ECSSCEE-EEEEEEEECCCCCCCEEE--EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHH
T ss_pred EECCCce-EEEEEEEECCCCCCCcce--EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccccccc
Confidence 9988875 455677776655321111 1223456788888742 22333 3778877653211100 000 12
Q ss_pred CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 170 RSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
..+.|.++...+.|.|+|.+.|..|....+..+.+..+|
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 679999999999999999999999987666666666555
No 203
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.85 E-value=9.2e-21 Score=134.41 Aligned_cols=173 Identities=13% Similarity=0.208 Sum_probs=113.6
Q ss_pred ccceEEecCCcEEEEeeCCCC--CCCCeeEEeeCC--E---Ee-c-----------cccCceEEEec-----CcEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRG--HPEPTLVWKKNG--H---PI-D-----------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~--~~~~~~~W~~~~--~---~~-~-----------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
+..+.+.+|++++|.|.+ .+ .+...+.||+.. . .+ . ....+++.+.. ..+|.|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAA-SGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp ECCCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEe-eCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 456789999999999987 33 235689999842 1 11 0 01223444432 23599999
Q ss_pred cCCCCCceEEEEEEcCC---CCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeCCc
Q psy573 87 SRKTDDGRYQCVVKNVA---GTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRLGS 157 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~---~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~ 157 (216)
++.+|+|.|.|.+.+.. .........|.|. .+|.+........+..|+.+.|.|.+.+ .|.+ .+.|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 99999999999998752 1112333566665 4555554344445667999999999987 5656 899999886
Q ss_pred cCCCC---C----eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 158 AMPED---R----MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 158 ~~~~~---~----~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
..... . ......+.|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 43110 0 111222568899999999 99999999999887777666654
No 204
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.85 E-value=8.6e-20 Score=124.46 Aligned_cols=152 Identities=15% Similarity=0.193 Sum_probs=108.0
Q ss_pred eEEecCCcEEEEeeCCCCCCCC--eeEEeeCCEEeccccCceEE-EecCcEEEEcccCCCCCceEEEEEEcCCCCcccce
Q psy573 34 QRVAAGDTALLECGPPRGHPEP--TLVWKKNGHPIDFENSKRLR-LVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTD 110 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~--~~~W~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 110 (216)
+.+.+|++++|.|.+ +.|.+ .+.|++.+..+ ++.. ...+..|.|.+++.+|+|.|.|.+.+..+. ....
T Consensus 17 v~v~~G~sv~L~C~a--~~p~P~~~i~W~~~~~~l-----~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~-~~~~ 88 (210)
T 1gsm_A 17 VAVALGASRQLTCRL--ACADRGASVQWRGLDTSL-----GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT-FQHT 88 (210)
T ss_dssp EEEETTCCEEEEEEE--CCSSTTCEEEEESSTTTT-----CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred eEEeCCCCEEEEEEC--CCCCCCcceEEeeccccc-----CcEEecCCccEEEECccCcccCceEEEEEEeCCCc-eEEE
Confidence 589999999999997 55666 99999854322 2222 233467999999999999999999987655 3567
Q ss_pred eEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CC----cEEEEeeCCccCCCCCe---ee------e---cC----
Q psy573 111 AVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV----LTVHWKRLGSAMPEDRM---SV------L---PS---- 169 (216)
Q Consensus 111 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~i~W~~~~~~~~~~~~---~~------~---~~---- 169 (216)
+.|.|..+|........ ....|+.. |.|.+.+. |. ++|.|+|++..+..... .. . ..
T Consensus 89 ~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (210)
T 1gsm_A 89 VQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFR 166 (210)
T ss_dssp EEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEE
T ss_pred EEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEE
Confidence 88999988855432222 56677888 99999875 53 58999999998854321 11 0 11
Q ss_pred --CeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 170 --RSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 170 --~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
+++.+.....++.+.|+|.|.+..-.
T Consensus 167 vts~~~~~~~~~D~~~~~tC~a~~~L~~ 194 (210)
T 1gsm_A 167 VTERWRLPPLGTPVPPALYCQATMRLPG 194 (210)
T ss_dssp EEEEEECCCCCSSCCSEEEEEEEEEETT
T ss_pred EEEEEeecCCcccCCceEEEEEEeeCCC
Confidence 12333355666678999999987644
No 205
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.84 E-value=1.3e-21 Score=134.80 Aligned_cols=157 Identities=14% Similarity=0.196 Sum_probs=105.1
Q ss_pred EecCCcEEEEeeCCCCCC----CCeeEEeeCCEEecccc--------CceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 36 VAAGDTALLECGPPRGHP----EPTLVWKKNGHPIDFEN--------SKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 36 ~~~G~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~~~--------~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+.+|+.++|.|.+ .+.+ ...+.|++++..+.... .+.+ ...+.|.|.+++.+|+|.|+|.+.+..
T Consensus 15 v~~G~~v~L~C~~-~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~~~~~D~G~Y~C~a~~~~ 91 (207)
T 2vol_A 15 LTITLTPKVTCVV-VDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTF--RSVSELPIMHQDWLNGKEFKCRVNSAA 91 (207)
T ss_dssp HSTTSCCEEEEEE-EEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEE--EEEEEEECCHHHHHTTCCEEEEEECTT
T ss_pred hccCCceEEEEEE-eCcccCCCceEEEEEECCccccccccCCCcCcCCCcE--EEEEEEEEehhHcCCCCEEEEEEEccC
Confidence 7899999999998 4442 35899999997663210 1111 112469999999999999999999876
Q ss_pred CCcc-cceeEE--EEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccCCCCCe---eeecCCe----
Q psy573 104 GTRE-STDAVL--RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAMPEDRM---SVLPSRS---- 171 (216)
Q Consensus 104 ~~~~-~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~---~~~~~~~---- 171 (216)
+... ...+.+ .+..+|.+...+.......|+.+.|.|.+.+. |. +.+.|++++..+..... ....+++
T Consensus 92 ~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~ 171 (207)
T 2vol_A 92 FPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVY 171 (207)
T ss_dssp CSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEE
T ss_pred CCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEE
Confidence 6421 122222 34556766544443333468999999999875 44 38999999987643211 1122332
Q ss_pred --EEEecCCCCCCeEEEEEEEcCCcc
Q psy573 172 --LQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 172 --l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
|.+.....+|.|.|+|.|.|....
T Consensus 172 s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 172 SKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEEEECHHHcCCCCEEEEEEECCCCC
Confidence 455555556899999999998754
No 206
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.84 E-value=3e-20 Score=132.94 Aligned_cols=169 Identities=17% Similarity=0.234 Sum_probs=112.6
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEE---ecc-c---------cCc-eEEEec----CcEEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHP---IDF-E---------NSK-RLRLVD----GTNLAI 84 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~---~~~-~---------~~~-~~~~~~----~~~l~i 84 (216)
..+...|..+.+.+|++++|.|.+ .+ +.+.+.||+. +.. +.. . ... ++.... +.+|.|
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 105 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIP-EK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEI 105 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEEC-CT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEE
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEe-cC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEE
Confidence 455666777899999999999997 33 6789999982 111 000 0 001 444432 458999
Q ss_pred cccCCCCCceEEEEEEcCCC---CcccceeEEEEee------cceEEe-CCCceeEeCCCcEEEEEEeCC-CCCc-EEEE
Q psy573 85 QDSRKTDDGRYQCVVKNVAG---TRESTDAVLRVLV------KPYIIR-GPKDTTVSAGSIIVFECSVGG-DAVL-TVHW 152 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~---~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W 152 (216)
.+++.+|+|.|.|.+.+... ........|.|.. +|.+.. .+....+..|+.+.|.|.+.+ .|.+ .+.|
T Consensus 106 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 185 (270)
T 3qib_D 106 QSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 185 (270)
T ss_dssp SSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEE
Confidence 99999999999999986431 1222344666654 454433 233334456899999999987 5656 8999
Q ss_pred eeCCccCCCCCee---------------eecCCeEEEecCCCCC-CeEEEEEEEcCCcc
Q psy573 153 KRLGSAMPEDRMS---------------VLPSRSLQLSDVRLED-GGEYVCEAENAVGK 195 (216)
Q Consensus 153 ~~~~~~~~~~~~~---------------~~~~~~l~i~~~~~~d-~g~y~C~~~n~~~~ 195 (216)
++++..+...... ......|.|.....+| +|.|+|.+.|....
T Consensus 186 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 186 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 9999877543211 1111346777776667 99999999988664
No 207
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.84 E-value=3.2e-20 Score=133.46 Aligned_cols=171 Identities=13% Similarity=0.219 Sum_probs=114.3
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EE---ec------------cccCceEEEec----CcEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HP---ID------------FENSKRLRLVD----GTNLA 83 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~---~~------------~~~~~~~~~~~----~~~l~ 83 (216)
+.+...|..+.+.+|+.++|.|.+ .+.+.+.+.||++. .. +. .....++.... +.+|.
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEE-SSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEe-CCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 456667778899999999999998 56677899999863 11 10 01234555442 24799
Q ss_pred EcccCCCCCceEEEEEEcCCC----C-cccceeEEEEee------cceEEeC-CCceeEeCCCcEEEEEEeCCC-CC-cE
Q psy573 84 IQDSRKTDDGRYQCVVKNVAG----T-RESTDAVLRVLV------KPYIIRG-PKDTTVSAGSIIVFECSVGGD-AV-LT 149 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~----~-~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~ 149 (216)
|.+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+... +....+..|+.+.|.|.+.+. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998421 1 112234566654 4544432 222334468999999999876 43 69
Q ss_pred EEEeeCCccCCCCCeee---------ecC------CeEEEecCCCCC-CeEEEEEEEcCCcce
Q psy573 150 VHWKRLGSAMPEDRMSV---------LPS------RSLQLSDVRLED-GGEYVCEAENAVGKI 196 (216)
Q Consensus 150 i~W~~~~~~~~~~~~~~---------~~~------~~l~i~~~~~~d-~g~y~C~~~n~~~~~ 196 (216)
+.|++++..+....... ..+ +.|.|......| .|.|+|.+.|.....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 99999998775432110 012 236666666654 789999999987653
No 208
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.84 E-value=7.1e-20 Score=130.30 Aligned_cols=170 Identities=15% Similarity=0.206 Sum_probs=113.0
Q ss_pred ecccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEec---------------cccCceEEEec-----CcEEEE
Q psy573 29 VQPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPID---------------FENSKRLRLVD-----GTNLAI 84 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~-----~~~l~i 84 (216)
..|..+.+.+|++++|.|.+ .+.+ .+.+.||++. .... .....++.+.. +.+|.|
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 89 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKA-SGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQL 89 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ECCCCEEEcCCCCEEEEEEe-CCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEE
Confidence 34567789999999999998 4444 5789999863 2110 01134555432 347999
Q ss_pred cccCCCCCceEEEEEEcCCCC--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCC
Q psy573 85 QDSRKTDDGRYQCVVKNVAGT--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLG 156 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~ 156 (216)
.+++.+|+|.|.|.+.+..+. .......|.|.. +|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++
T Consensus 90 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g 169 (261)
T 2xqy_G 90 SSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGS 169 (261)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCC
Confidence 999999999999999985421 112335677764 3554432322346679999999999875 666 99999998
Q ss_pred ccCCC---CCe----eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 157 SAMPE---DRM----SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 157 ~~~~~---~~~----~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
..+.. ... .....+.|.|.....+| |.|+|.|.|.........
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~ 219 (261)
T 2xqy_G 170 LSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDK 219 (261)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEE
Confidence 75421 111 11123568888888878 999999999776644443
No 209
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.84 E-value=9.7e-20 Score=126.06 Aligned_cols=168 Identities=15% Similarity=0.222 Sum_probs=108.4
Q ss_pred ccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEe---c-----------cccCceEEEec-----CcEEEEccc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPI---D-----------FENSKRLRLVD-----GTNLAIQDS 87 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~---~-----------~~~~~~~~~~~-----~~~l~i~~~ 87 (216)
|....+.+|+.++|.|.+ .+.+ .+.+.||++. ... . ....+++.... +.+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTV-SGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEE-CSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred CCCeeecCCCcEEEEEEE-CCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 556788999999999998 4433 5789999852 211 0 01234555432 238999999
Q ss_pred CCCCCceEEEEEEcCCCC--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccC
Q psy573 88 RKTDDGRYQCVVKNVAGT--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAM 159 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 159 (216)
+.+|+|.|.|.+.+..+. .......|.|.. +|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++..+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 999999999999876421 122345677763 3544433323345789999999999876 777 99999988654
Q ss_pred CCCCe-eeecCCeE----EEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 160 PEDRM-SVLPSRSL----QLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 160 ~~~~~-~~~~~~~l----~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
..... .....+.+ .+.....+| |.|+|.+.|..+......
T Consensus 166 ~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 166 DVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp SCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 32110 01111221 122444456 999999999988755443
No 210
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.84 E-value=3.5e-20 Score=131.47 Aligned_cols=169 Identities=14% Similarity=0.255 Sum_probs=98.2
Q ss_pred ccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEec---------------cccCceEEEec-----CcEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPID---------------FENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~-----~~~l~i~~ 86 (216)
+..+.+.+|++++|.|.+ .+.+ .+.+.||+.. .... ....+++.... ..+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAA-SGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp ECCEEECTTCEEEEEEEE-ESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred cCCEEEcCCCcEEEEEEe-ccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 445689999999999997 4443 5789999853 1110 11234555432 24799999
Q ss_pred cCCCCCceEEEEEEcCCC----------C--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-
Q psy573 87 SRKTDDGRYQCVVKNVAG----------T--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL- 148 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~----------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~- 148 (216)
++.+|+|.|.|.+.+..+ . .......|.|.. +|.+........+..|+.+.|.|.+.+. |.+
T Consensus 86 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi 165 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 165 (257)
T ss_dssp CCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCC
T ss_pred CChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCc
Confidence 999999999999997653 1 112335677764 4555443333346679999999999875 766
Q ss_pred EEEEeeCCccCCCCC--eeeecC------CeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 149 TVHWKRLGSAMPEDR--MSVLPS------RSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 149 ~i~W~~~~~~~~~~~--~~~~~~------~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
.+.|++++..+.... .....+ +.|.|.+...+| |.|+|.+.|..........
T Consensus 166 ~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~~~ 225 (257)
T 3bn9_D 166 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 225 (257)
T ss_dssp EEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEEEE
T ss_pred EEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEEEE
Confidence 899999987542110 001111 346677777667 9999999997665444333
No 211
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.83 E-value=7.2e-20 Score=140.30 Aligned_cols=172 Identities=13% Similarity=0.249 Sum_probs=117.5
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeC--CE---Eec------------cccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKN--GH---PID------------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~--~~---~~~------------~~~~~~~~~~~-----~~~l~i~ 85 (216)
.+..+.+.+|+.++|.|.+ .+.+ .+.+.||++ +. .+. ....+++.... ...|.|.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQA-SGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELR 84 (457)
T ss_dssp ECCCEEECTTCCEEECEEE-ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred cCCceEEcCCCCEEEEEEe-cCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEEC
Confidence 3456789999999999998 4544 678999984 22 110 01234555432 2479999
Q ss_pred ccCCCCCceEEEEEEcCCC---------C--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CC-c
Q psy573 86 DSRKTDDGRYQCVVKNVAG---------T--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-L 148 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~---------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~ 148 (216)
+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+...+....+.+|+.+.|.|.+.+. |. +
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 164 (457)
T 1hzh_H 85 SLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 164 (457)
T ss_dssp SCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCC
T ss_pred CCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCe
Confidence 9999999999999988754 1 122345677754 4555443434456789999999999876 64 7
Q ss_pred EEEEeeCCccCCCCCee--eec------CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy573 149 TVHWKRLGSAMPEDRMS--VLP------SRSLQLSDVRLEDGGEYVCEAENAVGKISASATLT 203 (216)
Q Consensus 149 ~i~W~~~~~~~~~~~~~--~~~------~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~ 203 (216)
.+.|++++..+...... ... .+.|.|.++..+| |.|+|.+.|..+.......+.
T Consensus 165 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~ 226 (457)
T 1hzh_H 165 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAE 226 (457)
T ss_dssp EEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEec
Confidence 99999998654311110 011 1368899999889 999999999887755554444
No 212
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.83 E-value=5.6e-20 Score=144.84 Aligned_cols=162 Identities=20% Similarity=0.325 Sum_probs=115.9
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecc----------ccCceEEEecCcEEEEcccCCCCCceEEEEEEc
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDF----------ENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~----------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
....+.+|++++|.|.+..+.|.+.+.||+++..+.. ....+.....+++|.|.+++.+|+|.|+|.+.+
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 3467899999999998755678889999998652210 113345556667899999999999999999998
Q ss_pred CCCCcccceeEEEEeecc---eEEeCCCceeEeCCCc-EEEEEEeCC-CCCcEEEEeeCCccCCCC--Ceeee-------
Q psy573 102 VAGTRESTDAVLRVLVKP---YIIRGPKDTTVSAGSI-IVFECSVGG-DAVLTVHWKRLGSAMPED--RMSVL------- 167 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~-~~l~C~~~~-~p~~~i~W~~~~~~~~~~--~~~~~------- 167 (216)
..+......+.|.|..+| .+.. ....+..+.. +.|.|.+.+ .|.+.+.|++++..+... .....
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVD--SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEES--CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEc--CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 877654556778886643 3322 2233555554 466999987 589999999999877532 21110
Q ss_pred ------cCCeEEEecCCCC-CCeEEEEEEEcCCcc
Q psy573 168 ------PSRSLQLSDVRLE-DGGEYVCEAENAVGK 195 (216)
Q Consensus 168 ------~~~~l~i~~~~~~-d~g~y~C~~~n~~~~ 195 (216)
..++|.|..++.+ +.|.|+|.+.|..+.
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 1145888888844 488999999998654
No 213
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.83 E-value=1.2e-19 Score=128.62 Aligned_cols=167 Identities=15% Similarity=0.178 Sum_probs=108.2
Q ss_pred EecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEE---ecc----------ccCc-eEEEecCcE--EEEcccCC
Q psy573 28 RVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHP---IDF----------ENSK-RLRLVDGTN--LAIQDSRK 89 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~---~~~----------~~~~-~~~~~~~~~--l~i~~~~~ 89 (216)
...|..+.+.+|+.++|.|.+ .+.+.+.+.||+. +.. +.. ...+ ++....+.. |.|.+++.
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~ 83 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCIL-KNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANM 83 (253)
T ss_dssp EEECSEEEEESSCCEEEEEEC-SCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESC
T ss_pred EeCCCeEEEeCCCcEEEEEEe-CCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCCh
Confidence 345667889999999999987 5667789999982 111 100 0112 444443322 99999999
Q ss_pred CCCceEEEEEEcCCC-----CcccceeEEEEe------ecceEEeC-CCceeEeCCCcEEEEEEeCC-CCCc-EEEEeeC
Q psy573 90 TDDGRYQCVVKNVAG-----TRESTDAVLRVL------VKPYIIRG-PKDTTVSAGSIIVFECSVGG-DAVL-TVHWKRL 155 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~-----~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~ 155 (216)
+|+|.|+|.+.+..+ ........|.|. .+|.+... +....+..|+.+.|.|.+.+ .|.+ .+.|+++
T Consensus 84 ~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~ 163 (253)
T 3to4_D 84 SQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 163 (253)
T ss_dssp SSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEEC
Confidence 999999999986543 111223455554 34444332 22223335689999999987 5655 8999999
Q ss_pred CccCCCCCee---------------eecCCeEEEecCCCCC-CeEEEEEEEcCCcc
Q psy573 156 GSAMPEDRMS---------------VLPSRSLQLSDVRLED-GGEYVCEAENAVGK 195 (216)
Q Consensus 156 ~~~~~~~~~~---------------~~~~~~l~i~~~~~~d-~g~y~C~~~n~~~~ 195 (216)
+..+...... ....+.|.|.....+| .|.|+|.|.|....
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 164 GKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp TEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 8876542211 1111357777776666 77999999987543
No 214
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.82 E-value=7.2e-21 Score=139.58 Aligned_cols=161 Identities=16% Similarity=0.280 Sum_probs=106.9
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCC---eeEEeeCC-EEecccc-------CceEEEecCcEEEEcccCCCCCceEEEE
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEP---TLVWKKNG-HPIDFEN-------SKRLRLVDGTNLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~---~~~W~~~~-~~~~~~~-------~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 98 (216)
.|....+.+|+.++|.|.+....|.+ .+.||+++ ..+.... .+.+. ..+.|.|.+++.+|+|.|+|.
T Consensus 119 ~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~--~~~~L~I~~~~~~D~G~Y~C~ 196 (323)
T 2wqr_A 119 RPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT--VTSTLPVGTRDWIEGETYQCR 196 (323)
T ss_dssp CCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE--EEEEEECCHHHHHTTCCEEEE
T ss_pred CCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE--EEEEEEECHHHccCCCCEEEE
Confidence 34444577899999999973334555 89999975 3332110 11111 234699999999999999999
Q ss_pred EEcCCCCcccceeEEEE------eecceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccCCCCCeee----
Q psy573 99 VKNVAGTRESTDAVLRV------LVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAMPEDRMSV---- 166 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~~~~~---- 166 (216)
+.+..... ...+.+ ..+|.+...+.......|+.+.|.|.+.+. |.+ .+.|++++..+.......
T Consensus 197 a~n~~~~~---~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 273 (323)
T 2wqr_A 197 VTHPHLPR---ALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPR 273 (323)
T ss_dssp EECTTSSS---CEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCE
T ss_pred EECCCCCC---CeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcc
Confidence 99875322 223333 245555433222222239999999999874 433 799999998775432211
Q ss_pred -------ecCCeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 167 -------LPSRSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 167 -------~~~~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
...+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 274 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 274 KTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp ECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 11246889889899999999999998876
No 215
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.82 E-value=1.4e-19 Score=138.14 Aligned_cols=171 Identities=13% Similarity=0.208 Sum_probs=116.4
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EEec---------------cccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HPID---------------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~-----~~~l~i~ 85 (216)
.|..+.+.+|+.++|.|.+ .+.+ .+.+.||++. .... ....+++.... ..+|.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCAT-SGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMS 84 (444)
T ss_dssp EECCCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCeEEcCCCCEEEEEEc-CCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEEC
Confidence 3456789999999999998 4432 5689999852 2210 01234555432 3479999
Q ss_pred ccCCCCCceEEEEEEcCCCC--cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCc
Q psy573 86 DSRKTDDGRYQCVVKNVAGT--RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGS 157 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~ 157 (216)
+++.+|+|.|.|.+.+..+. .......|.|.. +|.+...+....+.+|+.+.|.|.+.+. |.+ .+.|++++.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 164 (444)
T 1igt_B 85 RLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 164 (444)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCC
Confidence 99999999999999986543 122345677763 4544433333345789999999999875 766 999999887
Q ss_pred cCCC---CCe----eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 158 AMPE---DRM----SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 158 ~~~~---~~~----~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
.+.. ... .....+.|.|.++..+| |.|+|.+.|..+.......+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i 215 (444)
T 1igt_B 165 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 215 (444)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEEC
T ss_pred CCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEe
Confidence 5321 110 11122468899999889 99999999999885544444
No 216
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.81 E-value=8.7e-21 Score=130.59 Aligned_cols=169 Identities=15% Similarity=0.228 Sum_probs=100.5
Q ss_pred cceEecccceEE--ecCCcEEEEeeCCCCCC----CCeeEEeeCCEEeccccCceEEEecCcEEEE------cccCCCCC
Q psy573 25 EEFRVQPKSQRV--AAGDTALLECGPPRGHP----EPTLVWKKNGHPIDFENSKRLRLVDGTNLAI------QDSRKTDD 92 (216)
Q Consensus 25 ~~~~~~~~~~~~--~~G~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i------~~~~~~d~ 92 (216)
|.+.+.+.+..+ .+|+.++|.|.+ .+.+ ...+.||+++..+............++.+.+ ......|+
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~-~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~ 80 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVV-VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 80 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEE-EEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CeEEEeCcChHHheecCCceEEEEEE-ecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCC
Confidence 334444444333 699999999998 4433 3599999999876422111111223333333 23334459
Q ss_pred ceEEEEEEcCCCCcccceeEE----EEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccCCCCC---
Q psy573 93 GRYQCVVKNVAGTRESTDAVL----RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAMPEDR--- 163 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l----~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~--- 163 (216)
|.|+|.+.+..+.. .....+ .+..+|.+...+.......|..+.|.|.+.+. |. +.+.|++++..+....
T Consensus 81 g~Y~C~a~n~~~~~-~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 159 (207)
T 1l6x_A 81 KEYKCKVSNKALPA-PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP 159 (207)
T ss_dssp CCEEEEEECTTSSS-CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred ceEEEEEEcCcCCc-ceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccC
Confidence 99999999876543 111122 23455665443333222345569999999885 44 4899999998765321
Q ss_pred eeeecCCe------EEEecCCCCCCeEEEEEEEcCCcc
Q psy573 164 MSVLPSRS------LQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 164 ~~~~~~~~------l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
.....+++ |.+.....+|.|.|+|.|.|....
T Consensus 160 ~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 160 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 11122333 344444445799999999998654
No 217
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.81 E-value=1.7e-20 Score=143.23 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=115.1
Q ss_pred ceeeEEe---eccceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccC------ceEEEecCcEEEEc
Q psy573 16 KKLKIEM---LREEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENS------KRLRLVDGTNLAIQ 85 (216)
Q Consensus 16 ~~l~v~~---~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~------~~~~~~~~~~l~i~ 85 (216)
+.|.|.. .+|.+...+....+.+|+.++|.|.+....|.+ .+.|++++..+..... +.+.. .+.|.|.
T Consensus 112 ~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~ 189 (444)
T 1igt_B 112 TTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVT 189 (444)
T ss_dssp EEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE--EEEEEEC
T ss_pred EEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEE--EEEEEEc
Confidence 4555543 123343333333357999999999983334665 9999998875311111 11111 2468999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEE------------------eecceE-EeCCCcee-EeCCCcEEEEEEeCCC
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRV------------------LVKPYI-IRGPKDTT-VSAGSIIVFECSVGGD 145 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v------------------~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~ 145 (216)
++..+| |.|.|.+.+..+... ....+.+ ..+|.+ ...+.... +..|+.+.|.|.+.+.
T Consensus 190 ~~~~~d-g~Y~C~a~n~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~ 267 (444)
T 1igt_B 190 SSTWPS-QSITCNVAHPASSTK-VDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDV 267 (444)
T ss_dssp STTTTT-SCCEEEEEETTTTEE-EEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEE
T ss_pred hhhcCC-CeEEEEEEeCCCCcc-eEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeec
Confidence 999899 999999999876531 1112211 124554 33333323 5789999999999887
Q ss_pred C----CcEEEEeeCCccCCCCCe---ee------ecCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 146 A----VLTVHWKRLGSAMPEDRM---SV------LPSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 146 p----~~~i~W~~~~~~~~~~~~---~~------~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
+ .+.+.|++++..+..... .. ...+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 268 ~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 268 SEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp CTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred ccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 3 368999999987643211 11 122479999999999999999999998875
No 218
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.81 E-value=3.4e-19 Score=128.59 Aligned_cols=165 Identities=13% Similarity=0.181 Sum_probs=102.8
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec----CcEEEEcccCCCCCceEEEEEEcC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD----GTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+........+.+|+.+.|.|.+ .+. +.|++++..+. .+..... .+.|.|.+++.+|+|.|+|.+.+.
T Consensus 3 i~~~~~~~~v~~G~~v~L~C~~-~~~----v~W~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 73 (289)
T 3mjg_X 3 VTPPGPELVLNVSSTFVLTCSG-SAP----VVWERMSQEPP----QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDS 73 (289)
T ss_dssp BCSSCSEEECCTTCCEEEEEEE-SSC----CEEEBTTBCCS----EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-
T ss_pred ecCCCCeEEEeCCCcEEEEEec-cce----EEEECCCCCcc----cceeccCCCceeEEEEEccCChhhCEEEEEEEccc
Confidence 3334455778999999999998 442 99999988762 2222222 247999999999999999999987
Q ss_pred CCCccc--ceeEEEEeecceEEeCCC-c---eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEec
Q psy573 103 AGTRES--TDAVLRVLVKPYIIRGPK-D---TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSD 176 (216)
Q Consensus 103 ~~~~~~--~~~~l~v~~~p~~~~~~~-~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~ 176 (216)
.+.... ..+.+.+..+........ . ..+.+|+.+.|.|.+. .|.+.+.|++++....... .......+.
T Consensus 74 ~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~-~~~~~~~~~--- 148 (289)
T 3mjg_X 74 RGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV-PYDHQRGFS--- 148 (289)
T ss_dssp -----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC-CEETTTEEE---
T ss_pred CCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce-eecCCcCee---
Confidence 754222 233444432222111111 1 4688999999999998 6778888888653222211 111112222
Q ss_pred CCCCCCeEEEEEEEcCCcc-eEEEEEEEEEe
Q psy573 177 VRLEDGGEYVCEAENAVGK-ISASATLTVQS 206 (216)
Q Consensus 177 ~~~~d~g~y~C~~~n~~~~-~~~~~~l~v~~ 206 (216)
...|+|.|+|.+.|..+. .+..+.|.+..
T Consensus 149 -~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~ 178 (289)
T 3mjg_X 149 -GIFEDRSYICKTTIGDREVDSDAYYVYRLQ 178 (289)
T ss_dssp -ECCCSSEEEEEEEETTEEEECCCEEEEECC
T ss_pred -eeccCcEEEEEEEeCCceeeeeeEEEEecC
Confidence 357999999999987665 33345566654
No 219
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.81 E-value=9.4e-19 Score=122.96 Aligned_cols=167 Identities=14% Similarity=0.204 Sum_probs=108.3
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EE---ec----------cccCceEEEec----CcEEEEccc
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HP---ID----------FENSKRLRLVD----GTNLAIQDS 87 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~---~~----------~~~~~~~~~~~----~~~l~i~~~ 87 (216)
+...|..+.+.+|+.++|.|.+ . .+.+.+.||++. .. +. .....++.+.. +.+|.|.++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 79 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQ-T-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELA 79 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEE-S-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSC
T ss_pred cccCCCeeEEeCCCcEEEEEEe-C-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecC
Confidence 3456777899999999999997 3 357899999853 11 10 01133444432 247999999
Q ss_pred CCCCCceEEEEEEcCCC----CcccceeEEEEee------cceEEe-CCCceeEeCCCcEEEEEEeCCC-CCc-EEEEee
Q psy573 88 RKTDDGRYQCVVKNVAG----TRESTDAVLRVLV------KPYIIR-GPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKR 154 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~----~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~ 154 (216)
+.+|+|.|.|.+.+..+ ........|.|.. +|.+.. .+....+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 80 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~ 159 (238)
T 1bec_A 80 TPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV 159 (238)
T ss_dssp CGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE
T ss_pred CcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEE
Confidence 99999999999997632 1112234566654 455543 3344456679999999999876 644 899999
Q ss_pred CCccCCCCCe-----eeecCCeEE------EecCCCC-CCeEEEEEEEcCCcc
Q psy573 155 LGSAMPEDRM-----SVLPSRSLQ------LSDVRLE-DGGEYVCEAENAVGK 195 (216)
Q Consensus 155 ~~~~~~~~~~-----~~~~~~~l~------i~~~~~~-d~g~y~C~~~n~~~~ 195 (216)
++..+..... ....++++. |...... +.|.|+|.+.|....
T Consensus 160 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 160 NGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred CCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 9987654321 112233333 2222222 367999999997544
No 220
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.81 E-value=8.6e-21 Score=133.33 Aligned_cols=170 Identities=14% Similarity=0.194 Sum_probs=106.7
Q ss_pred cceEecccceE--EecCCcEEEEeeCCCCC---CCC-eeEEeeCCEEeccccCce-EE-----EecCcEEEEcccCCCCC
Q psy573 25 EEFRVQPKSQR--VAAGDTALLECGPPRGH---PEP-TLVWKKNGHPIDFENSKR-LR-----LVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 25 ~~~~~~~~~~~--~~~G~~~~l~C~~~~~~---~~~-~~~W~~~~~~~~~~~~~~-~~-----~~~~~~l~i~~~~~~d~ 92 (216)
|.+.+.+.... +.+|+.++|.|.+ .+. |.+ .+.||+++..+....... .. ......|.|.+++.+|+
T Consensus 16 P~v~~~pp~~~~~v~~G~~v~L~C~~-~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 16 SSVFIFPPKTKDVLGGGLTPKVTCVV-VDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp -CEEEECCCHHHHTTSSSCCEEEEEE-EEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CEEEEECCChHHhcccCCcEEEEEEE-ecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 44444444433 6799999999998 443 655 899999886653111000 00 01124699999999999
Q ss_pred ceEEEEEEcCCCCcc-cceeEE--EEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccCCCCC---e
Q psy573 93 GRYQCVVKNVAGTRE-STDAVL--RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAMPEDR---M 164 (216)
Q Consensus 93 g~y~C~~~~~~~~~~-~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~---~ 164 (216)
|.|+|.+.+..+... ...+.+ .+..+|.+...+.......|+.+.|.|.+.+. |. ..+.|++++..+.... .
T Consensus 95 g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 174 (239)
T 1i1c_A 95 KTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPP 174 (239)
T ss_dssp CCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCC
T ss_pred CeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCc
Confidence 999999998766431 112211 23456666544443333457889999999874 44 4899999998775321 1
Q ss_pred eeecCCe------EEEecCCCCCCeEEEEEEEcCCcc
Q psy573 165 SVLPSRS------LQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 165 ~~~~~~~------l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
....+++ |.+.....+|.|.|+|.|.|....
T Consensus 175 ~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 175 TMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred eECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 1123333 334444345699999999998765
No 221
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.81 E-value=2.3e-19 Score=125.45 Aligned_cols=166 Identities=15% Similarity=0.185 Sum_probs=108.0
Q ss_pred eEecccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCC--E---Eecc----------c-cCceEEEec-----CcEEE
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNG--H---PIDF----------E-NSKRLRLVD-----GTNLA 83 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~--~---~~~~----------~-~~~~~~~~~-----~~~l~ 83 (216)
+...|..+.+.+|++++|.|.+ .+. +...+.||+.. . .+.. . ..+++.... +.+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKV-FIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILT 82 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEE-CCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEe-eccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEE
Confidence 4456777899999999999998 442 45689999842 1 1100 0 345665542 23799
Q ss_pred EcccCCCCCceEEEEEEcC--CC-CcccceeEEEEee---------cceEE-eCCCceeEeCCCcEEEEEEeCCC-CC-c
Q psy573 84 IQDSRKTDDGRYQCVVKNV--AG-TRESTDAVLRVLV---------KPYII-RGPKDTTVSAGSIIVFECSVGGD-AV-L 148 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~--~~-~~~~~~~~l~v~~---------~p~~~-~~~~~~~~~~g~~~~l~C~~~~~-p~-~ 148 (216)
|.+++.+|+|.|.|.+.+. .. ........|.|.. +|... ..+....+..|+.+.|.|.+.+. |. +
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~ 162 (230)
T 1ypz_F 83 IYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVI 162 (230)
T ss_dssp ECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCC
T ss_pred ECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCe
Confidence 9999999999999999874 11 1122345677751 23211 11333344568899999999876 64 5
Q ss_pred EEEEee-CCccCCCCC---eee-----ecCCeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 149 TVHWKR-LGSAMPEDR---MSV-----LPSRSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 149 ~i~W~~-~~~~~~~~~---~~~-----~~~~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
.+.|++ ++..+.... ... ...+.|.|..... + |.|+|.+.|..+.
T Consensus 163 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 163 RVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 899999 776554221 111 1123577777765 4 8999999998775
No 222
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.80 E-value=4.5e-18 Score=130.99 Aligned_cols=166 Identities=16% Similarity=0.264 Sum_probs=111.4
Q ss_pred EecccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--EE---ec------------cccCceEEEec-----CcEEE
Q psy573 28 RVQPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--HP---ID------------FENSKRLRLVD-----GTNLA 83 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~~---~~------------~~~~~~~~~~~-----~~~l~ 83 (216)
...|..+.+.+|+.++|.|.+ .+.+ ...+.||+.. .. +. ....+++.... ..+|.
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (475)
T 1iga_A 5 LEQSGAEVKKPGASVKVSCKA-SGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMG 83 (475)
T ss_pred eccCCcEEEeCCCCEEEEEEe-cCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEE
Confidence 345677899999999999998 4433 5689999852 11 10 01134454432 24799
Q ss_pred EcccCCCCCceEEEEEEcCCCC-----cccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CC-c-EEE
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGT-----RESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-L-TVH 151 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~-~i~ 151 (216)
|.+++.+|+|.|.|.+.+..+. .......|.|.. +|.+...+. ..+.+|+.+.|.|.+.+. |. + .+.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~ 162 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSVT 162 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEEE
Confidence 9999999999999999986541 122345666653 344443322 223689999999999887 55 4 899
Q ss_pred EeeCCccCCCCC---------eeeecCCeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 152 WKRLGSAMPEDR---------MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 152 W~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
|++++....... ......+.|.|..+..+|.|.|+|.+.|..+.
T Consensus 163 W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 215 (475)
T 1iga_A 163 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 215 (475)
T ss_pred EcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC
Confidence 999875321110 01111235788888889999999999998874
No 223
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.80 E-value=1.5e-20 Score=137.93 Aligned_cols=172 Identities=14% Similarity=0.169 Sum_probs=107.6
Q ss_pred ccceEecccceEEecC--CcEEEEeeCCCCCC-CCeeEEeeCCEEeccccCce-EEEecC-----cEEEEcccCCCCCce
Q psy573 24 REEFRVQPKSQRVAAG--DTALLECGPPRGHP-EPTLVWKKNGHPIDFENSKR-LRLVDG-----TNLAIQDSRKTDDGR 94 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G--~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~~-~~~~~~-----~~l~i~~~~~~d~g~ 94 (216)
+|.+.+.+.......| +.+.|.|.+....| .+.+.|+++|..+....... ....++ ..|.|.+...+|+|.
T Consensus 7 ~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 86 (323)
T 2wqr_A 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRT 86 (323)
T ss_dssp CCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCC
T ss_pred CCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCc
Confidence 4555544433323344 69999999833234 47999999999874322111 111111 257788887889999
Q ss_pred EEEEEEcCCCCcccceeEEE---EeecceE-EeCCCceeEeCCCcEEEEEEeCCC-CCc---EEEEeeCCc-cCCCCCee
Q psy573 95 YQCVVKNVAGTRESTDAVLR---VLVKPYI-IRGPKDTTVSAGSIIVFECSVGGD-AVL---TVHWKRLGS-AMPEDRMS 165 (216)
Q Consensus 95 y~C~~~~~~~~~~~~~~~l~---v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~i~W~~~~~-~~~~~~~~ 165 (216)
|+|.+.+..+.. ...+.+. +...|.+ ...+....+..|+.+.|.|.+.+. |.+ .+.|++++. .+......
T Consensus 87 Y~C~a~n~~~~~-~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~ 165 (323)
T 2wqr_A 87 YTCQVTYQGHTF-EDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRK 165 (323)
T ss_dssp EEEEEEETTEEE-EEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCE
T ss_pred EEEEEEeCCCCc-ceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCC
Confidence 999999865432 1111110 1123433 334444567789999999999775 455 899999753 33221111
Q ss_pred --------eecCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 166 --------VLPSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 166 --------~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
....+.|.|.++..+|+|.|+|.+.|..+..
T Consensus 166 ~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 166 EEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp EEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred CccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCC
Confidence 1122469999999999999999999987543
No 224
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.80 E-value=2.2e-20 Score=130.74 Aligned_cols=162 Identities=14% Similarity=0.208 Sum_probs=106.4
Q ss_pred ecccceEEecCCcEEEEeeCCCC-CCC--CeeEEeeCCEEe-ccccCceEEEec------CcEEEEcccCCCCCceEEEE
Q psy573 29 VQPKSQRVAAGDTALLECGPPRG-HPE--PTLVWKKNGHPI-DFENSKRLRLVD------GTNLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~-~~~--~~~~W~~~~~~~-~~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~ 98 (216)
..|....+.+|+.++|.|.+ .+ .|. ..+.|+++|..+ ... ........ ...|.|.++..+|+|.|+|.
T Consensus 18 ~~p~~~~v~~G~~v~L~C~~-~g~~P~~p~~v~W~~~g~~~~~~~-~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~ 95 (231)
T 2w59_A 18 IPPSPGELYISLDAKLRCLV-VNLPSDSSLSVTWTREKSGNLRPD-PMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCT 95 (231)
T ss_dssp ECCCHHHHHTSCCCEEEEEE-EEESCCTTCEEEEECSSSSCCCCC-CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEE
T ss_pred eCcChhhcccCCceEEEEEE-eCccCCCCeEEEEEcCCeeccccc-cccceECCCCcEEEEEEEEecchhccCCCEEEEE
Confidence 44555667899999999998 44 463 499999988766 211 11111111 23699999999999999999
Q ss_pred EEcCCCCcccceeEEEEe------ecceEEeCCCceeEeCCCcEEEEEEeCCC-C-CcEEEEeeCCccCCCCCe-----e
Q psy573 99 VKNVAGTRESTDAVLRVL------VKPYIIRGPKDTTVSAGSIIVFECSVGGD-A-VLTVHWKRLGSAMPEDRM-----S 165 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~~-----~ 165 (216)
+.+..+.. ...+.+. .+|.+...+.......+..+.|.|.+.+. | .+.+.|++++..+..... .
T Consensus 96 ~~~~~~~~---~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 172 (231)
T 2w59_A 96 VQHEELPL---PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVL 172 (231)
T ss_dssp EECTTCSS---CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCE
T ss_pred EEcCCCCC---ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccc
Confidence 99876432 2333332 34555432222111234579999999885 4 368999999987754321 1
Q ss_pred ee--------cC-------CeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 166 VL--------PS-------RSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 166 ~~--------~~-------~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
.. .+ +.|.|.....+|.|.|+|.|.|....
T Consensus 173 ~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 173 PEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp ECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 11 12 34677777777899999999998765
No 225
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.80 E-value=6.6e-19 Score=124.77 Aligned_cols=169 Identities=14% Similarity=0.220 Sum_probs=111.3
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E--E-ecc----------ccCceEEEec----CcEEEEcc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H--P-IDF----------ENSKRLRLVD----GTNLAIQD 86 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~--~-~~~----------~~~~~~~~~~----~~~l~i~~ 86 (216)
.+...|..+.+.+|+.++|.|.+ . .+.+.+.||+.. . . +.. ....++.... +..|.|.+
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 82 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQ-N-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTS 82 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEE-C-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECS
T ss_pred cceEcCCeEEEcCCCcEEEEEEe-C-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECc
Confidence 45556777899999999999997 3 357899999853 1 1 100 1234555542 35799999
Q ss_pred cCCCCCceEEEEEEcCCC--CcccceeEEEEee------cceEEeC-CCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeC
Q psy573 87 SRKTDDGRYQCVVKNVAG--TRESTDAVLRVLV------KPYIIRG-PKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRL 155 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~--~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~ 155 (216)
++.+|+|.|.|.+.+... ........|.|.. +|.+... +....+..|+.+.|.|.+.+. |. +.+.|+++
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 83 AQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp CCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 999999999999987521 1112234566642 4555432 333344568999999999875 64 48999999
Q ss_pred CccCCCCCeee---------ecC------CeEEEecCCCC-CCeEEEEEEEcCCcce
Q psy573 156 GSAMPEDRMSV---------LPS------RSLQLSDVRLE-DGGEYVCEAENAVGKI 196 (216)
Q Consensus 156 ~~~~~~~~~~~---------~~~------~~l~i~~~~~~-d~g~y~C~~~n~~~~~ 196 (216)
+..+....... ..+ +.|.|...... +.|.|+|.+.|.....
T Consensus 163 g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 163 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp TEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 88765432110 112 23666665543 6789999999987543
No 226
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.80 E-value=1e-18 Score=122.18 Aligned_cols=173 Identities=13% Similarity=0.227 Sum_probs=111.5
Q ss_pred ccceEEecCCcEEEEeeCCC-CCCCCeeEEeeCC--E---Ee------------ccccCceEEEecC-----cEEEEccc
Q psy573 31 PKSQRVAAGDTALLECGPPR-GHPEPTLVWKKNG--H---PI------------DFENSKRLRLVDG-----TNLAIQDS 87 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~~~--~---~~------------~~~~~~~~~~~~~-----~~l~i~~~ 87 (216)
+..+.+.+|++++|.|.+.. ......+.||+.. . .+ .....+++....+ .+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 44578999999999998732 1234689999732 1 11 0112345554321 25999999
Q ss_pred CCCCCceEEEEEEcCCC-------CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-C-CcEEEEee
Q psy573 88 RKTDDGRYQCVVKNVAG-------TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-A-VLTVHWKR 154 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~ 154 (216)
+.+|+|.|.|.+.+..+ ........|.|. .+|.+........+..|+.+.|.|.+.+. | .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W-- 164 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-- 164 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--
Confidence 99999999999987531 111233456664 34455433333445689999999999774 4 356999
Q ss_pred CCccCCCCC----------eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 155 LGSAMPEDR----------MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 155 ~~~~~~~~~----------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
++..+.... ......+.|.|.....+| |.|+|.|.|..+.......|.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 165 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 554443211 011112368888888889 999999999988777666665553
No 227
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.80 E-value=2.5e-19 Score=125.38 Aligned_cols=172 Identities=14% Similarity=0.198 Sum_probs=106.1
Q ss_pred ccceEEecCCcEEEEeeCCCCC--CCCee--EEeeCC-----EEe-c-------------cccCceEEEec-----CcEE
Q psy573 31 PKSQRVAAGDTALLECGPPRGH--PEPTL--VWKKNG-----HPI-D-------------FENSKRLRLVD-----GTNL 82 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~--~~~~~--~W~~~~-----~~~-~-------------~~~~~~~~~~~-----~~~l 82 (216)
+..+.+.+|++++|.|.+ .+. ....+ .||+.. ..+ . ....+++.... ..+|
T Consensus 7 ~~~~~v~~G~~v~L~C~~-~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 85 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSF-SGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVL 85 (232)
T ss_dssp ECCSEECTTSCEEEEEEE-ESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEE
T ss_pred CCCEEECCCCcEEEEEEE-eCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEE
Confidence 345678999999999987 332 22344 999842 111 0 11123554432 2369
Q ss_pred EEcccCCCCCceEEEEEEcCCC-------CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCCCC--cE
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAG-------TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGDAV--LT 149 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~ 149 (216)
.|.+++.+|+|.|.|.+.+..+ ........+.|. .+|.+...+....+..|+.+.|.|.+.+.++ ..
T Consensus 86 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~ 165 (232)
T 3qhz_H 86 TMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (232)
T ss_dssp EECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCE
T ss_pred EECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeE
Confidence 9999999999999999986521 112233456664 3455553333345567999999999977543 36
Q ss_pred EEEeeCCccCCCC--------CeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 150 VHWKRLGSAMPED--------RMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 150 i~W~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
+.|++++..+... .......+.|.|......| |.|+|.|.|..+.......|.+
T Consensus 166 v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 8899988643211 0111112468888888888 9999999999887776666544
No 228
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.80 E-value=4.7e-19 Score=124.58 Aligned_cols=173 Identities=15% Similarity=0.186 Sum_probs=110.1
Q ss_pred cccceEEecCCcEEEEeeCCCCCC----CCeeEEeeCC--E---Ee---c--------------cccCceEEEec-----
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP----EPTLVWKKNG--H---PI---D--------------FENSKRLRLVD----- 78 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~----~~~~~W~~~~--~---~~---~--------------~~~~~~~~~~~----- 78 (216)
.+..+.+.+|++++|.|.+ .+.+ ...+.||+.. . .+ . ....+++....
T Consensus 6 ~~~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 6 ESGPTLVEASETLSLTCAV-SGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp EESCSEECTTSCEEEEEEE-ESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred cCCCEEEcCCCCEEEEEEE-cCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 3456789999999999997 3333 4589999842 1 11 0 01234454432
Q ss_pred CcEEEEcccCCCCCceEEEEEEcCCC------------CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEe
Q psy573 79 GTNLAIQDSRKTDDGRYQCVVKNVAG------------TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSV 142 (216)
Q Consensus 79 ~~~l~i~~~~~~d~g~y~C~~~~~~~------------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~ 142 (216)
..+|.|.+++.+|+|.|.|.+.+..+ ........|.|. .+|.+...+....+..|+.+.|.|.+
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~ 164 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 164 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEE
Confidence 23599999999999999999976421 011223355554 34555533344445679999999999
Q ss_pred CCC-CCc-EEEEeeCCccCCCC--------CeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 143 GGD-AVL-TVHWKRLGSAMPED--------RMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 143 ~~~-p~~-~i~W~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
.+. |.+ .+.|++++..+... .......+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 165 ~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 165 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred eeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 774 433 58999988643211 1111112458888888888 9999999999887666655543
No 229
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.80 E-value=6.4e-19 Score=124.49 Aligned_cols=176 Identities=15% Similarity=0.218 Sum_probs=109.8
Q ss_pred ecccceEEecCCcEEEEeeCCC-CCCCCeeEEeeCC--E---Ee------------ccccCceEEEec-----CcEEEEc
Q psy573 29 VQPKSQRVAAGDTALLECGPPR-GHPEPTLVWKKNG--H---PI------------DFENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~~~--~---~~------------~~~~~~~~~~~~-----~~~l~i~ 85 (216)
..+..+.+.+|++++|.|.+.. ..+...+.||+.. . .+ .....+++.... ..+|.|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 3556778999999999998732 1234689999742 1 11 011234554432 2369999
Q ss_pred ccCCCCCceEEEEEEcCC---------------------CCcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEE
Q psy573 86 DSRKTDDGRYQCVVKNVA---------------------GTRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFEC 140 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~---------------------~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C 140 (216)
+++.+|+|.|.|.+.+.. .........|.|. .+|.+...+....+..|+.+.|.|
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C 163 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 163 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEE
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEE
Confidence 999999999999998631 1112233456665 345555333444456799999999
Q ss_pred EeCCC-C-CcEEEEeeCCccCCCC--------CeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 141 SVGGD-A-VLTVHWKRLGSAMPED--------RMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 141 ~~~~~-p-~~~i~W~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.+.+. | .+.+.|.+++..+... .......+.|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 164 ~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 164 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred EEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEccC
Confidence 99764 4 4579999988643211 1111112457788887778 99999999998877666665544
No 230
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=1.3e-18 Score=106.80 Aligned_cols=92 Identities=29% Similarity=0.478 Sum_probs=77.7
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee---cCCeEEEecCCCCCCeEEEEEEEcC
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL---PSRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .... ....|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 46777788888999999999999999999999999999999886543 3322 1246999999999999999999999
Q ss_pred CcceEEEEEEEEEecc
Q psy573 193 VGKISASATLTVQSKY 208 (216)
Q Consensus 193 ~~~~~~~~~l~v~~~p 208 (216)
.|....++.|.|.++|
T Consensus 92 ~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCEEEEEEEEEEEcCC
Confidence 9999999999998876
No 231
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.79 E-value=1.9e-19 Score=137.08 Aligned_cols=170 Identities=14% Similarity=0.233 Sum_probs=114.7
Q ss_pred cccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCC--EEec---------------cccCceEEEec-----CcEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNG--HPID---------------FENSKRLRLVD-----GTNLAIQ 85 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~--~~~~---------------~~~~~~~~~~~-----~~~l~i~ 85 (216)
.+..+.+.+|+.++|.|.+ .+. +.+.+.||++. .... ....+++.+.. ...|.|.
T Consensus 5 ~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKA-SGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp CCCCCEECTBCCEEECCEE-CSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred CCCCeEecCCCCEEEEEEc-cCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 3456789999999999998 443 35789999863 2210 01134555432 2479999
Q ss_pred ccCCCCCceEEEEEEcCCCCcccceeEEEEee----cceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccC
Q psy573 86 DSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV----KPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAM 159 (216)
Q Consensus 86 ~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 159 (216)
+++.+|+|.|.|.+.+..+.. .....|.|.. +|.+...+....+.+|+.+.|.|.+.+. |.+ .+.|++++...
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~ 162 (434)
T 1igy_B 84 SLTSDDSAVYYCVREGEVPYW-GQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 162 (434)
T ss_dssp SBCGGGCSEECCCCSSSSCCC-CCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCS
T ss_pred CCChHHCEEEEEEEEcccccc-CCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCC
Confidence 999999999999998753322 3345666652 3444432333345789999999999876 666 99999998753
Q ss_pred CC---CC----eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 160 PE---DR----MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 160 ~~---~~----~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
.. .. ......+.|.|.++..+| |.|+|.+.|..+.......+
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~ 211 (434)
T 1igy_B 163 GVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKI 211 (434)
T ss_dssp SEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEEC
T ss_pred CeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeec
Confidence 11 00 011112468899999888 99999999999875444333
No 232
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.79 E-value=2.3e-18 Score=132.63 Aligned_cols=184 Identities=16% Similarity=0.238 Sum_probs=113.4
Q ss_pred hhceeeEEee---ccceEecccceEEecCCcEEEEeeCCCCCCC-C-eeEEeeCCEEecccc--------CceEEEecCc
Q psy573 14 EKKKLKIEML---REEFRVQPKSQRVAAGDTALLECGPPRGHPE-P-TLVWKKNGHPIDFEN--------SKRLRLVDGT 80 (216)
Q Consensus 14 ~~~~l~v~~~---~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~-~-~~~W~~~~~~~~~~~--------~~~~~~~~~~ 80 (216)
..+.|.|... +|.+...+. ..+.+|+.++|.|.+....|. + .+.|++++....... .+.+.. .+
T Consensus 114 ~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~--~s 190 (475)
T 1iga_A 114 QGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT--SS 190 (475)
T ss_pred CceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEE--EE
Confidence 3456666531 344433322 223689999999998333365 4 999999875321111 011111 13
Q ss_pred EEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEe------------------ecceE-EeCCCceeEeCCCcEEEEEE
Q psy573 81 NLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVL------------------VKPYI-IRGPKDTTVSAGSIIVFECS 141 (216)
Q Consensus 81 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~------------------~~p~~-~~~~~~~~~~~g~~~~l~C~ 141 (216)
.|.|.+....|+|.|.|.+.+..+......+.+.|. .+|.+ ...+....+.+|+.+.|.|.
T Consensus 191 ~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~ 270 (475)
T 1iga_A 191 QLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCT 270 (475)
T ss_pred EEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEE
Confidence 588888888999999999998775322222332221 23444 22233334578999999999
Q ss_pred eCCCCC---cEEEEeeCCccCCCCC---e------eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 142 VGGDAV---LTVHWKRLGSAMPEDR---M------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 142 ~~~~p~---~~i~W~~~~~~~~~~~---~------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
+.+.++ +.+.| ++..+.... . .....+.|.|.++..+|+|.|+|.+.|..+.......|
T Consensus 271 ~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v 341 (475)
T 1iga_A 271 LTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATL 341 (475)
T ss_pred EEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEe
Confidence 987644 68999 433332110 0 01123469999999999999999999998875444444
No 233
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.77 E-value=5e-19 Score=135.64 Aligned_cols=180 Identities=17% Similarity=0.230 Sum_probs=110.5
Q ss_pred hceeeEEee---ccceEecccceEEecCCcEEEEeeCCCCCCC-CeeEEeeCCEEeccccCceEEEecC------cEEEE
Q psy573 15 KKKLKIEML---REEFRVQPKSQRVAAGDTALLECGPPRGHPE-PTLVWKKNGHPIDFENSKRLRLVDG------TNLAI 84 (216)
Q Consensus 15 ~~~l~v~~~---~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~-~~~~W~~~~~~~~~~~~~~~~~~~~------~~l~i 84 (216)
.+.|.|... +|.+...+....+.+|+.++|.|.+....|. +.+.|++++..+........ ...+ +.|.|
T Consensus 120 ~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~-~~~~~~~~~~s~L~i 198 (457)
T 1hzh_H 120 GTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTV 198 (457)
T ss_dssp CEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEE-ECTTSCEEEEEEEEE
T ss_pred cEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCce-ECCCCCEEEEEEEEe
Confidence 345666542 3444444444456899999999998333364 79999999864321100001 1111 36999
Q ss_pred cccCCCCCceEEEEEEcCCCCcccceeEEEE-----------------eecceE-EeCCCcee-EeCCCcEEEEEEeCCC
Q psy573 85 QDSRKTDDGRYQCVVKNVAGTRESTDAVLRV-----------------LVKPYI-IRGPKDTT-VSAGSIIVFECSVGGD 145 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v-----------------~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~ 145 (216)
.++..+| |.|+|.+.+..+.. .....+.+ ..+|.+ ...+.... +.+|+.+.|.|.+.+.
T Consensus 199 ~~~~~~d-G~Y~C~a~n~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~ 276 (457)
T 1hzh_H 199 PSSSLGT-QTYICNVNHKPSNT-KVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDV 276 (457)
T ss_dssp CSGGGGT-SCCEEEEEEGGGTE-EEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECC
T ss_pred cccccCC-ceEEEEEEeCCCCc-ceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcc
Confidence 9999999 99999999865432 11122221 123444 33333222 5689999999999887
Q ss_pred CCc----EEEEeeCCccCCCCCe---eeecCCeEEEec---CCCCC---CeEEEEEEEcCCcceE
Q psy573 146 AVL----TVHWKRLGSAMPEDRM---SVLPSRSLQLSD---VRLED---GGEYVCEAENAVGKIS 197 (216)
Q Consensus 146 p~~----~i~W~~~~~~~~~~~~---~~~~~~~l~i~~---~~~~d---~g~y~C~~~n~~~~~~ 197 (216)
+++ .+.|++++..+..... ....++.+.+.. +...| .|.|+|.|.|..+...
T Consensus 277 ~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~ 341 (457)
T 1hzh_H 277 SHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 341 (457)
T ss_dssp CTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSC
T ss_pred cCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCc
Confidence 543 8999999987653321 112334444442 33455 9999999998766543
No 234
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=4.1e-18 Score=117.16 Aligned_cols=164 Identities=15% Similarity=0.214 Sum_probs=102.6
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eec-----cccCceEEEecC------cEEEEcccCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PID-----FENSKRLRLVDG------TNLAIQDSRKT 90 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~-----~~~~~~~~~~~~------~~l~i~~~~~~ 90 (216)
+...|..+.+.+|+.++|.|.+ .+.. ..+.||+.. . .+. ....+++....+ .+|.|.+++.+
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~-~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~ 81 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNF-TTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLE 81 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEE-SSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGG
T ss_pred cEECCCeEEEccCCcEEEEEEE-eCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHH
Confidence 4556777899999999999998 3333 489999853 1 110 012344544422 47999999999
Q ss_pred CCceEEEEEEcCCC---------C-cccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCcc
Q psy573 91 DDGRYQCVVKNVAG---------T-RESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSA 158 (216)
Q Consensus 91 d~g~y~C~~~~~~~---------~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~ 158 (216)
|+|.|.|.+.+..+ . .......|.|.........| ...+..+ .+.|.|.+.+. |. +.+.|+++ ..
T Consensus 82 D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~ 158 (207)
T 1ypz_E 82 DSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KK 158 (207)
T ss_dssp GCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SE
T ss_pred HCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Cc
Confidence 99999999987632 1 11233567776421111111 1111112 36899999765 44 69999999 65
Q ss_pred CCCCC--eeeecCCeEEEecCCC-CCCeEEEEEEEcCCcc
Q psy573 159 MPEDR--MSVLPSRSLQLSDVRL-EDGGEYVCEAENAVGK 195 (216)
Q Consensus 159 ~~~~~--~~~~~~~~l~i~~~~~-~d~g~y~C~~~n~~~~ 195 (216)
+.... .....++++.+..... ++.|.|+|.+.|..+.
T Consensus 159 l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 159 IVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp EEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTEE
T ss_pred ccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCcc
Confidence 53221 1123445666654444 6789999999998764
No 235
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.76 E-value=9.7e-18 Score=119.03 Aligned_cols=173 Identities=14% Similarity=0.231 Sum_probs=107.2
Q ss_pred cccceEEecCCcEEEEeeCCC-CCCCCeeEEeeCC--E---Ee------------ccccCceEEEec-----CcEEEEcc
Q psy573 30 QPKSQRVAAGDTALLECGPPR-GHPEPTLVWKKNG--H---PI------------DFENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~~~--~---~~------------~~~~~~~~~~~~-----~~~l~i~~ 86 (216)
.+..+.+.+|++++|.|.+.. ......+.||+.. . .+ .....+|+.... +.+|.|.+
T Consensus 29 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 108 (256)
T 3sob_H 29 ESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNS 108 (256)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECC
Confidence 344578999999999998722 1234689999732 1 11 011234554432 22599999
Q ss_pred cCCCCCceEEEEEEcCCC----------CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-C-CcEE
Q psy573 87 SRKTDDGRYQCVVKNVAG----------TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-A-VLTV 150 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~----------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i 150 (216)
++.+|+|.|.|.+.+..+ ........|.|. .+|.+........+.+|+.+.|.|.+.+. | .+.+
T Consensus 109 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v 188 (256)
T 3sob_H 109 LRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 188 (256)
T ss_dssp CCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEE
T ss_pred CCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEE
Confidence 999999999999986431 112233456664 34445433333355689999999999764 4 4579
Q ss_pred EEeeCCccCCCCC----------eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 151 HWKRLGSAMPEDR----------MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 151 ~W~~~~~~~~~~~----------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.| ++..+.... ......+.|.|.....+| |.|+|.+.|..+.......|.+.
T Consensus 189 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 189 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 99 444432210 011112368888888889 99999999998877666665544
No 236
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.76 E-value=3.7e-19 Score=131.57 Aligned_cols=177 Identities=16% Similarity=0.245 Sum_probs=107.5
Q ss_pred hceeeEEe---eccceEecccceEEecCCcEEEEeeCCCCC-CC-CeeEEeeCCEEeccc-------cCceEEEecCcEE
Q psy573 15 KKKLKIEM---LREEFRVQPKSQRVAAGDTALLECGPPRGH-PE-PTLVWKKNGHPIDFE-------NSKRLRLVDGTNL 82 (216)
Q Consensus 15 ~~~l~v~~---~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~-~~-~~~~W~~~~~~~~~~-------~~~~~~~~~~~~l 82 (216)
.+.|.|.. .+|.+...+....+.+|+.++|.|.+ .+. |. +.+.|++++..+... ..+.+.. .+.|
T Consensus 108 ~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~-~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~--~s~L 184 (344)
T 1za6_B 108 GTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV-KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVV 184 (344)
T ss_dssp CEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE-EEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEE--EEEE
T ss_pred cEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE-eeEECCCeEEEEecCCccCceeECCCeECCCCCEEE--EEEE
Confidence 34566653 23444433333445799999999998 443 54 799999998753111 1111111 1368
Q ss_pred EEcccCCCCCceEEEEEEcCCCCcc-cceeEE----------------------EEeecceEEeCCCceeEeCCCcEEEE
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGTRE-STDAVL----------------------RVLVKPYIIRGPKDTTVSAGSIIVFE 139 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~~l----------------------~v~~~p~~~~~~~~~~~~~g~~~~l~ 139 (216)
.|.++..+| |.|+|.+.+..+... ...+.+ .+..+|.+...+.......|..+.|.
T Consensus 185 ~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~ 263 (344)
T 1za6_B 185 TVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLT 263 (344)
T ss_dssp EEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEE
T ss_pred EEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEE
Confidence 999988878 999999998765421 111110 11345555443332223346679999
Q ss_pred EEeCCC-C-CcEEEEeeCCccCCCCC---eeeecCC------eEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 140 CSVGGD-A-VLTVHWKRLGSAMPEDR---MSVLPSR------SLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 140 C~~~~~-p-~~~i~W~~~~~~~~~~~---~~~~~~~------~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
|.+.+. | .+.+.|++++..+.... .....++ .|.|.....+|.|.|+|.|.|....
T Consensus 264 C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 264 CLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 999885 3 35899999998765321 1112222 3455555556799999999998765
No 237
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.76 E-value=3.4e-18 Score=121.79 Aligned_cols=170 Identities=15% Similarity=0.235 Sum_probs=103.8
Q ss_pred ccceEEecCCcEEEEeeCCCCC--CCCeeEEeeCC-----EEe-----------ccccCceEEEec-----CcEEEEccc
Q psy573 31 PKSQRVAAGDTALLECGPPRGH--PEPTLVWKKNG-----HPI-----------DFENSKRLRLVD-----GTNLAIQDS 87 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~-----~~~-----------~~~~~~~~~~~~-----~~~l~i~~~ 87 (216)
+..+.+.+|++++|.|.+ .+. ....+.||+.. ..+ .....+++.... +.+|.|.++
T Consensus 7 ~~~v~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (263)
T 3iu4_H 7 SGPGLVAPSQSLSITCTV-SGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSL 85 (263)
T ss_dssp ECCSEECTTSCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEe-ccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCC
Confidence 345679999999999987 332 24689999742 111 011234555432 235999999
Q ss_pred CCCCCceEEEEEEcCCC-------CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-C-CcEEEEee
Q psy573 88 RKTDDGRYQCVVKNVAG-------TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-A-VLTVHWKR 154 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~ 154 (216)
+.+|+|.|.|.+.+... ........|.|. .+|.+........+..|+.+.|.|.+.+. | .+.+.|
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W-- 163 (263)
T 3iu4_H 86 QTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW-- 163 (263)
T ss_dssp CGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--
T ss_pred CHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--
Confidence 99999999999986531 111233456664 34455432333345578999999999775 4 367999
Q ss_pred CCccCCCC----------CeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 155 LGSAMPED----------RMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 155 ~~~~~~~~----------~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
++..+... .......+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 222 (263)
T 3iu4_H 164 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 222 (263)
T ss_dssp GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEcC
Confidence 44333211 0011112357888887778 9999999999887665555443
No 238
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.75 E-value=2.1e-17 Score=100.21 Aligned_cols=89 Identities=26% Similarity=0.483 Sum_probs=75.4
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC---Ceeeec---CCeEEEecCCCCCCeEEEEEEEc
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED---RMSVLP---SRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~---~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.... ..+|.|.++..+|+|.|+|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 566777778889999999999999999999999999999887643 233322 24699999999999999999999
Q ss_pred CCcceEEEEEEEEEe
Q psy573 192 AVGKISASATLTVQS 206 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~ 206 (216)
..|..+.++.|.|++
T Consensus 85 ~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 85 EFGSDSATVNIHIRS 99 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEEEEE
Confidence 999999999998874
No 239
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.75 E-value=1.3e-17 Score=124.77 Aligned_cols=159 Identities=13% Similarity=0.178 Sum_probs=106.1
Q ss_pred EecCCcEEEEeeCCCCC---C-CCeeEEeeCCEEeccccCceE------EEecCcEEEEcccCCCCCceEEEEEEcCCCC
Q psy573 36 VAAGDTALLECGPPRGH---P-EPTLVWKKNGHPIDFENSKRL------RLVDGTNLAIQDSRKTDDGRYQCVVKNVAGT 105 (216)
Q Consensus 36 ~~~G~~~~l~C~~~~~~---~-~~~~~W~~~~~~~~~~~~~~~------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 105 (216)
+..|+.++|.|.+ .+. | ...+.||+++..+........ .......|.|.+++.+|+|.|+|.+.+..+.
T Consensus 180 ~~~g~~v~L~C~~-~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 180 LTITLTPKVTCVV-VDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 258 (376)
T ss_pred eeeCCeeEEEEEE-eccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCC
Confidence 7899999999998 444 2 237999999865421111000 0111236999999999999999999987653
Q ss_pred cc-cceeEE--EEeecceEEeCCCceeEeCCCcEEEEEEeCCCC--CcEEEEeeCCccCCCCCe---eeecC------Ce
Q psy573 106 RE-STDAVL--RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDA--VLTVHWKRLGSAMPEDRM---SVLPS------RS 171 (216)
Q Consensus 106 ~~-~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~~~~~~~~~---~~~~~------~~ 171 (216)
.. ...+.+ .+..+|.+...+.......|+.+.|.|.+.+.+ .+.+.|++++..+..... ....+ ..
T Consensus 259 ~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~ 338 (376)
T 2aty_A 259 APIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSK 338 (376)
T ss_pred CceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEE
Confidence 21 112211 345567776666655555688999999998863 458999999987643211 11122 34
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcc
Q psy573 172 LQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
|.|.....+|.|.|+|.|.|....
T Consensus 339 L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 339 LNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred EEEcHHHhCCCCcEEEEEEeCCCC
Confidence 666666677899999999997654
No 240
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.75 E-value=6.2e-20 Score=139.77 Aligned_cols=177 Identities=14% Similarity=0.208 Sum_probs=113.8
Q ss_pred hceeeEEe---eccceEecccceEEecCCcEEEEeeCCCCC-CCC-eeEEeeCCEEecccc------CceEEEecCcEEE
Q psy573 15 KKKLKIEM---LREEFRVQPKSQRVAAGDTALLECGPPRGH-PEP-TLVWKKNGHPIDFEN------SKRLRLVDGTNLA 83 (216)
Q Consensus 15 ~~~l~v~~---~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~-~~~-~~~W~~~~~~~~~~~------~~~~~~~~~~~l~ 83 (216)
.+.|.|.. .+|.+...+....+.+|+.++|.|.+ .+. |.+ .+.|++++....... .+.+.. .+.|.
T Consensus 107 ~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~-~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~--~s~L~ 183 (434)
T 1igy_B 107 GTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV-KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVT 183 (434)
T ss_dssp CEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE-EEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEE--EEEEE
T ss_pred ceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE-eeecCCCeEEEEeeCCcCCCeEecCceecCCcEEE--EEEEE
Confidence 34566643 23444433333345799999999998 443 665 999999987531110 111111 24689
Q ss_pred EcccCCCCCceEEEEEEcCCCCcccceeEEEEee---------c---ceEE-eCCCcee-EeCCCcEEEEEEeCCCC---
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLV---------K---PYII-RGPKDTT-VSAGSIIVFECSVGGDA--- 146 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~---------~---p~~~-~~~~~~~-~~~g~~~~l~C~~~~~p--- 146 (216)
|.++..+| |.|.|.+.+..+... ....+.+.. . |.+. ..+.... +.+|+.+.|.|.+.+.+
T Consensus 184 i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P 261 (434)
T 1igy_B 184 VPSSPRPS-ETVTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDD 261 (434)
T ss_dssp EETTTTTS-SCCEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSC
T ss_pred EcchhcCC-CcEEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCC
Confidence 99999889 999999999876531 112221110 0 3333 2222222 78899999999998874
Q ss_pred -CcEEEEeeCCccCCCCCe---------eeecCCeEEEecCCCCCCeEEEEEEEcCCcce
Q psy573 147 -VLTVHWKRLGSAMPEDRM---------SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 147 -~~~i~W~~~~~~~~~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~ 196 (216)
.+.+.|++++..+..... .....+.|.|.++..+|.|.|+|.+.|..|..
T Consensus 262 ~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 262 PEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp CCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred CCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 358999999876642211 01123568999999999999999999988854
No 241
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.75 E-value=2.1e-19 Score=129.00 Aligned_cols=195 Identities=15% Similarity=0.133 Sum_probs=69.2
Q ss_pred hHhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCC--eeEEeeCCEEeccccCceEEEecCcEEEEcccC
Q psy573 11 EEEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEP--TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSR 88 (216)
Q Consensus 11 ~~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 88 (216)
..++.+.|.|...|..+.+.+....+.+|+.++|.|.+..+.|.. .+.||+++..+...... .......|.+....
T Consensus 73 ~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~--~~~~~~~l~~~~~~ 150 (291)
T 1mq8_A 73 QSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV--GEPAEVTTTVLVRR 150 (291)
T ss_dssp EEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC--BTTEEEEEECCCSS
T ss_pred cEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC--CCCceEEEEeeeee
Confidence 345667777777777777777666688999999999985555654 58999999877422210 00012356666777
Q ss_pred CCCCceEEEEEEcCCCC-------cccceeEEEEeecceE-EeCCCceeEeCCCcEEEEEEeCCCCCc---EEEEeeCCc
Q psy573 89 KTDDGRYQCVVKNVAGT-------RESTDAVLRVLVKPYI-IRGPKDTTVSAGSIIVFECSVGGDAVL---TVHWKRLGS 157 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~-------~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~~~ 157 (216)
.+|.+.|+|++.+..+. ..+....|.|.++|.. ........+.+|+.+.|.|.+.+.+++ .+.|.+++.
T Consensus 151 ~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~ 230 (291)
T 1mq8_A 151 DHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQ 230 (291)
T ss_dssp SCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------------------------------------------
T ss_pred ccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCE
Confidence 77777999999976431 1244567777777532 111112357789999999999987554 599999998
Q ss_pred cCCCCCeeeecCCeEEEecC---CCC--CCeEEEEEEEcCCcceEEEEEEEEEecce
Q psy573 158 AMPEDRMSVLPSRSLQLSDV---RLE--DGGEYVCEAENAVGKISASATLTVQSKYL 209 (216)
Q Consensus 158 ~~~~~~~~~~~~~~l~i~~~---~~~--d~g~y~C~~~n~~~~~~~~~~l~v~~~p~ 209 (216)
.+...... .+..+.+... ..+ +.+.|.|.+.+..........|.|.+-|.
T Consensus 231 ~l~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~ 285 (291)
T 1mq8_A 231 RLNPTVTY--GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (291)
T ss_dssp ---------------------------------------------------------
T ss_pred ecCceeee--cCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCC
Confidence 77643211 2223333222 233 35678888887665566666777765443
No 242
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.75 E-value=7e-18 Score=117.58 Aligned_cols=169 Identities=13% Similarity=0.217 Sum_probs=104.6
Q ss_pred ccceEEecCCcEEEEeeCCCC-CCCCeeEEeeCC--E---Ee------------ccccCceEEEec-----CcEEEEccc
Q psy573 31 PKSQRVAAGDTALLECGPPRG-HPEPTLVWKKNG--H---PI------------DFENSKRLRLVD-----GTNLAIQDS 87 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~-~~~~~~~W~~~~--~---~~------------~~~~~~~~~~~~-----~~~l~i~~~ 87 (216)
+..+.+.+|++++|.|.+... .+...+.||+.. . .+ .....+|+.... +.+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 445789999999999987221 234689999842 1 11 011223444332 235999999
Q ss_pred CCCCCceEEEEEEcCCC--------CcccceeEEEEe----ecceEEeCCCceeEeCCCcEEEEEEeCCC-C-CcEEEEe
Q psy573 88 RKTDDGRYQCVVKNVAG--------TRESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVFECSVGGD-A-VLTVHWK 153 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~--------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~ 153 (216)
+.+|+|.|.|.+.+..+ ........|.|. .+|.+...+....+..|..+.|.|.+.+. | .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W- 165 (226)
T 3mlr_H 87 QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 165 (226)
T ss_dssp CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE-
T ss_pred CcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE-
Confidence 99999999999976421 111223355553 23444432223334578999999999764 4 457999
Q ss_pred eCCccCCCCC----eeee------cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 154 RLGSAMPEDR----MSVL------PSRSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 154 ~~~~~~~~~~----~~~~------~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
++..+.... .... ..+.|.|.....+| |.|+|.|.|..+.......|
T Consensus 166 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 166 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 222 (226)
T ss_dssp -GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred -CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEEc
Confidence 443332110 0111 12368888888888 99999999998876555443
No 243
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.74 E-value=4.4e-17 Score=101.35 Aligned_cols=95 Identities=29% Similarity=0.371 Sum_probs=80.0
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeeec---CCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLP---SRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +..... ...|.|.++..+|+|.|+|.+.|..
T Consensus 7 pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 86 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKL 86 (114)
T ss_dssp CCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSS
T ss_pred CCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECC
Confidence 566667778889999999999999999999999999999887644 333322 3579999999999999999999999
Q ss_pred cceEEEEEEEEEecceeee
Q psy573 194 GKISASATLTVQSKYLKVI 212 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~~~~ 212 (216)
|.....+.|.|.+.|..+.
T Consensus 87 g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 87 GSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp CEEECCEEEEEECSCSCCC
T ss_pred CcEEEEEEEEEECCCCCCC
Confidence 9998899999998776554
No 244
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.74 E-value=2.3e-16 Score=122.53 Aligned_cols=171 Identities=13% Similarity=0.114 Sum_probs=107.9
Q ss_pred ccceEecc-cceEEecCCcEEEEeeCCCCCC-CCeeEEeeCCEEecccc-CceEEEecC------cEEEEcccCCCCCce
Q psy573 24 REEFRVQP-KSQRVAAGDTALLECGPPRGHP-EPTLVWKKNGHPIDFEN-SKRLRLVDG------TNLAIQDSRKTDDGR 94 (216)
Q Consensus 24 ~~~~~~~~-~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~-~~~~~~~~~------~~l~i~~~~~~d~g~ 94 (216)
+|.+.+.+ ....+.+|+.++|.|.+....| ...+.|++++..+.... ........+ +.|.|.....+|.|.
T Consensus 296 ~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~ 375 (512)
T 1zvo_C 296 PLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTS 375 (512)
T ss_pred CCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCe
Confidence 34444433 3345678999999999833334 34899999998763111 111111112 359999999999999
Q ss_pred EEEEEEcCCCCcccceeEEEE----eecceEEeCCCceeEeCCCcEE-EEEEeCCCCCc--EEEEeeCCccCCCCCee--
Q psy573 95 YQCVVKNVAGTRESTDAVLRV----LVKPYIIRGPKDTTVSAGSIIV-FECSVGGDAVL--TVHWKRLGSAMPEDRMS-- 165 (216)
Q Consensus 95 y~C~~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~i~W~~~~~~~~~~~~~-- 165 (216)
|.|.+.+..+......+.... ..+|.+...+... .|+.+. |.|.+.+.+++ .+.|+++|..+......
T Consensus 376 y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~ 452 (512)
T 1zvo_C 376 VTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPA 452 (512)
T ss_pred EEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCcccccc
Confidence 999999876543211111111 2345554433222 788899 99999986443 68999999887543211
Q ss_pred ---eecCC-------eEEEecCCCCCCeEEEEEEEcCCcceE
Q psy573 166 ---VLPSR-------SLQLSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 166 ---~~~~~-------~l~i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
...++ .|.+.....+|.|.|+|.|.|......
T Consensus 453 ~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~ 494 (512)
T 1zvo_C 453 RPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTL 494 (512)
T ss_pred ceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCc
Confidence 11222 355566666679999999999876533
No 245
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.74 E-value=1.1e-17 Score=102.64 Aligned_cols=95 Identities=29% Similarity=0.482 Sum_probs=74.7
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEc
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.||.|...|.++.+.+|+.+.|.|.+ .+.|.+.+.|++++..+.......+.... ...|.|.+++.+|+|.|+|.+.|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~-~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEE-EEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 47889889999999999999999998 78899999999999988543222222222 23799999999999999999999
Q ss_pred CCCCcccceeEEEEeecc
Q psy573 102 VAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p 119 (216)
..|.. ...+.|.|..+|
T Consensus 91 ~~G~~-~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEA-YAAAAVTVLEPP 107 (107)
T ss_dssp TTEEE-EEEEEEEEEC--
T ss_pred CCCEE-EEEEEEEEEcCC
Confidence 88865 446777777654
No 246
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.73 E-value=1.8e-17 Score=100.51 Aligned_cols=92 Identities=23% Similarity=0.445 Sum_probs=74.7
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec---CcEEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~ 99 (216)
.||.|...|.+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++.... ...|.|.+++.+|+|.|+|.+
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~-~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAF-TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEE-EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEE-EEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 36788888888999999999999998 78899999999999998655544554432 247999999999999999999
Q ss_pred EcCCCCcccceeEEEEe
Q psy573 100 KNVAGTRESTDAVLRVL 116 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~ 116 (216)
.|..|.. ...+.|.|.
T Consensus 83 ~N~~G~~-~~~~~l~V~ 98 (100)
T 3knb_A 83 GNEFGSD-SATVNIHIR 98 (100)
T ss_dssp EETTEEE-EEEEEEEEE
T ss_pred EECCCEE-EEEEEEEEE
Confidence 9988764 445666654
No 247
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.73 E-value=2.2e-18 Score=120.87 Aligned_cols=167 Identities=16% Similarity=0.207 Sum_probs=101.9
Q ss_pred ecccceE-EecCCcEEEEeeCCCCC--C-CCeeEEeeCCEEeccccCceEEEec------CcEEEEcccCCCCCceEEEE
Q psy573 29 VQPKSQR-VAAGDTALLECGPPRGH--P-EPTLVWKKNGHPIDFENSKRLRLVD------GTNLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 29 ~~~~~~~-~~~G~~~~l~C~~~~~~--~-~~~~~W~~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~ 98 (216)
..|.... +..|+.++|.|.+.... | ...+.|+++|..+............ .+.|.|.....+|.|.|.|.
T Consensus 28 ~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~ 107 (240)
T 4acp_A 28 FPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCK 107 (240)
T ss_dssp ECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEE
T ss_pred ECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEE
Confidence 3444444 55799999999984333 3 3489999999987432111111111 13577777777788999999
Q ss_pred EEcCCCCc-ccceeEE--EEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCccCCCCC---eeeecC-
Q psy573 99 VKNVAGTR-ESTDAVL--RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSAMPEDR---MSVLPS- 169 (216)
Q Consensus 99 ~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~~---~~~~~~- 169 (216)
+.+..+.. ....+.+ .+..+|.+...+.......|+.+.|.|.+.+. |.+ .+.|++++..+.... .....+
T Consensus 108 v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dg 187 (240)
T 4acp_A 108 VSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDG 187 (240)
T ss_dssp EECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTS
T ss_pred EEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCC
Confidence 99876532 1222221 23356666554444333458899999999884 543 799999998764211 111122
Q ss_pred -----CeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 170 -----RSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 170 -----~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
+.|.+......+.|.|+|.|.|....
T Consensus 188 t~~~~s~L~v~~~~~~~~~~ytC~V~h~~l~ 218 (240)
T 4acp_A 188 SFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 218 (240)
T ss_dssp CEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CEEEEEEEEEChHHhCCCCEEEEEEEECCCC
Confidence 34555555556789999999998753
No 248
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=7.5e-17 Score=97.88 Aligned_cols=92 Identities=28% Similarity=0.577 Sum_probs=78.6
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC--CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE--DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. .+.....++.|.|.++..+|+|.|+|.+.|..|
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 86 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSG 86 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSC
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCC
Confidence 456677777888899999999999999999999999999887652 344445667899999999999999999999999
Q ss_pred ceEEEEEEEEEecc
Q psy573 195 KISASATLTVQSKY 208 (216)
Q Consensus 195 ~~~~~~~l~v~~~p 208 (216)
.....+.|.|.++|
T Consensus 87 ~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 87 ETSWSAVLDVTESG 100 (100)
T ss_dssp CCBCCEEEEEESCC
T ss_pred CEEEEEEEEEecCC
Confidence 98888999888764
No 249
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.72 E-value=6.2e-16 Score=120.08 Aligned_cols=169 Identities=19% Similarity=0.261 Sum_probs=107.6
Q ss_pred cccceEEecCCcEEEEeeCCCCCC--C--CeeEEeeC--CEE---ec-----------cccCceEEEec-----CcEEEE
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHP--E--PTLVWKKN--GHP---ID-----------FENSKRLRLVD-----GTNLAI 84 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~--~--~~~~W~~~--~~~---~~-----------~~~~~~~~~~~-----~~~l~i 84 (216)
.|..+.+.+|+.++|.|.+ .+.+ . ..+.||+. +.. +. ....+++.... +.+|.|
T Consensus 6 qp~~v~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 84 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIV-SGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNL 84 (512)
T ss_pred CCCCEEEcCCCCEEEEEEE-cccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEE
Confidence 4567889999999999998 4322 2 67999985 221 10 01234555442 257999
Q ss_pred cccCCCCCceEEEEEEcCCC-----------C-cccceeEEEEee----cceEEe-CCCceeEeCCCcEEEEEEeCCC-C
Q psy573 85 QDSRKTDDGRYQCVVKNVAG-----------T-RESTDAVLRVLV----KPYIIR-GPKDTTVSAGSIIVFECSVGGD-A 146 (216)
Q Consensus 85 ~~~~~~d~g~y~C~~~~~~~-----------~-~~~~~~~l~v~~----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p 146 (216)
.+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+.. .+.......++.+.|.|.+.+. |
T Consensus 85 ~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 85 RSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred CcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeec
Confidence 99999999999999987532 1 112345666663 344432 1111102246899999999876 6
Q ss_pred Cc-EEEEeeCCccCCC---CCe-----eeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 147 VL-TVHWKRLGSAMPE---DRM-----SVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 147 ~~-~i~W~~~~~~~~~---~~~-----~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
.+ .+.|++++..... ... .....+.|.|.....+ .|.|+|.|.|..+.....+
T Consensus 165 ~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 165 TSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred CceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 55 8999996543210 000 0111234778777777 8999999999988755544
No 250
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.72 E-value=4.1e-17 Score=100.48 Aligned_cols=100 Identities=25% Similarity=0.401 Sum_probs=69.3
Q ss_pred eEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee-cCCeEEEecCCCCCCeEEEEE
Q psy573 111 AVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL-PSRSLQLSDVRLEDGGEYVCE 188 (216)
Q Consensus 111 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~-~~~~l~i~~~~~~d~g~y~C~ 188 (216)
+.+.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .... ....|.|.++..+|+|.|+|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEE
Confidence 34566778888888888899999999999999999999999999998775432 2222 457899999999999999999
Q ss_pred EEcCCcceEEEEEEEEEeccee
Q psy573 189 AENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 189 ~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
+.|..|.....+.|.|.++|..
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIEGAQEK 104 (108)
T ss_dssp EC----CEEEEEEEEEEC----
T ss_pred EEeCCCceEEEEEEEEeCCCcc
Confidence 9999999999999999987754
No 251
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.72 E-value=1.6e-16 Score=119.19 Aligned_cols=179 Identities=18% Similarity=0.244 Sum_probs=121.7
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec---CcEEEEcccCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD---GTNLAIQDSRK 89 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~ 89 (216)
+..+.|.|... |.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++.... ...|.|.++..
T Consensus 90 ~~~~~l~V~~~-P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~ 167 (389)
T 2jll_A 90 QKSMYLDIEYA-PKFISNQTIYYSWEGNPINISCDV-KSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSD 167 (389)
T ss_dssp EEEEEEEEEEE-EEECCSCCEEEECTTCCEEEEECE-EEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCST
T ss_pred ceEEEEEEEeC-CEEecCcceEEeccCCEEEEEEEE-EecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCCh
Confidence 45667777654 666555555678999999999998 77888999999999988554433444332 34799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCce--eEeCCCcEEEEEEeC----CCCCc--EEEEeeCCccCCC
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDT--TVSAGSIIVFECSVG----GDAVL--TVHWKRLGSAMPE 161 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~--~~~~g~~~~l~C~~~----~~p~~--~i~W~~~~~~~~~ 161 (216)
+|+|.|.|.+.|..|.. ...+.+.+...|.. +... ....+..+.|.|... +.|.. .+.|.+++...-.
T Consensus 168 ~d~G~Y~C~a~N~~G~~-~~~~~l~v~~~P~~---P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~ 243 (389)
T 2jll_A 168 NDFGRYNCTATNHIGTR-FQEYILALADVPSS---PYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK 243 (389)
T ss_dssp TSSEEEEEEEEETTEEE-EEEEEEEECCCCCC---CEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE
T ss_pred hhCEEEEEEEEcCCCcE-EEEEEEEecCCCCC---CcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE
Confidence 99999999999988764 33455555444321 1111 223457788988742 22322 4678776642211
Q ss_pred CCeee-ecCCeEEEecCCCCCCeEEEEEEEcCCcceEE
Q psy573 162 DRMSV-LPSRSLQLSDVRLEDGGEYVCEAENAVGKISA 198 (216)
Q Consensus 162 ~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~ 198 (216)
.... .....+.|.++...+.+.|.|.+.|..|....
T Consensus 244 -~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~ 280 (389)
T 2jll_A 244 -IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDY 280 (389)
T ss_dssp -EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCC
T ss_pred -EeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCC
Confidence 0111 12356999999999999999999999886433
No 252
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.71 E-value=1.4e-16 Score=99.27 Aligned_cols=98 Identities=24% Similarity=0.407 Sum_probs=82.1
Q ss_pred EeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC--CCeeeecC--C--eEEEecCCCCCCeEEEEE
Q psy573 115 VLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE--DRMSVLPS--R--SLQLSDVRLEDGGEYVCE 188 (216)
Q Consensus 115 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~~~--~--~l~i~~~~~~d~g~y~C~ 188 (216)
...+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+...... + +|.|.++..+|+|.|+|.
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEE
Confidence 34567777778888999999999999999999999999999988763 33433322 2 799999999999999999
Q ss_pred EEcCCcceEEEEEEEEEecceeee
Q psy573 189 AENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 189 ~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
+.|..|.....+.|.|..+|....
T Consensus 92 a~N~~G~~~~~~~l~V~~~p~~~~ 115 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDVTARPNQTL 115 (116)
T ss_dssp EEETTEEEEEEEEEEEECCSCCCC
T ss_pred EEcCCCeEEEEEEEEEeCCCCCCC
Confidence 999999999999999998886543
No 253
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.71 E-value=1.6e-16 Score=96.44 Aligned_cols=92 Identities=28% Similarity=0.438 Sum_probs=76.1
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC---eeeecCC--eEEEecCCCCCCeEEEEEEEc
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR---MSVLPSR--SLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~---~~~~~~~--~l~i~~~~~~d~g~y~C~~~n 191 (216)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ......+ .|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 45666667778889999999999999999999999999998775432 2222333 799999999999999999999
Q ss_pred CCcceEEEEEEEEEecc
Q psy573 192 AVGKISASATLTVQSKY 208 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~~p 208 (216)
..|....++.|.|.+++
T Consensus 84 ~~g~~~~~~~l~V~~~e 100 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAKE 100 (100)
T ss_dssp TTEEEEEEEEEEEECCC
T ss_pred CCCeEEEEEEEEEEecC
Confidence 99999999999888653
No 254
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.70 E-value=1.6e-15 Score=105.05 Aligned_cols=165 Identities=17% Similarity=0.318 Sum_probs=115.6
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCC---CCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEc
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHP---EPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~---~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+.+.+.|....+..|+.++|.|.+..+.| ...+.|||++..+.. ....|.+..+...|+|.|+|.+.+
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG---------aT~tLti~s~t~sdSG~YqCvVTD 73 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN---------NTATLTVADATSENAGSYKVTVQD 73 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEEEE
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC---------CcceEEeeeccccCCeEEEEEEEE
Confidence 34556677778899999999999855656 458999999987621 134788999999999999999998
Q ss_pred CCCCccc-ceeEEEEeecceEE-eCCCceeEeCCCcEEEEEEe--CC-CC-----CcEEEEeeCCccCCCCCeeeecCCe
Q psy573 102 VAGTRES-TDAVLRVLVKPYII-RGPKDTTVSAGSIIVFECSV--GG-DA-----VLTVHWKRLGSAMPEDRMSVLPSRS 171 (216)
Q Consensus 102 ~~~~~~~-~~~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~--~~-~p-----~~~i~W~~~~~~~~~~~~~~~~~~~ 171 (216)
..+.... ..+.+.....+.+. ..|.......|..+.|.+.+ .+ .+ ..++.|++++..+. ....
T Consensus 74 a~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Is-------gAq~ 146 (304)
T 3shs_A 74 TDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVID-------TTQD 146 (304)
T ss_dssp TTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEE-------SSSE
T ss_pred CCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEcc-------Cccc
Confidence 7765422 22222222222332 23444556677889998887 43 33 46899999997653 2345
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcc--eEEEEEEEEE
Q psy573 172 LQLSDVRLEDGGEYVCEAENAVGK--ISASATLTVQ 205 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~n~~~~--~~~~~~l~v~ 205 (216)
+.+......+.|.|.|.+.|..+. .+.++.+.+.
T Consensus 147 lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~ 182 (304)
T 3shs_A 147 ITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLA 182 (304)
T ss_dssp EEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEEC
T ss_pred cceeeEEecCCeEEEEEEEcCCCCcccccceEEEEE
Confidence 677778888999999999998763 4555555544
No 255
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.70 E-value=3.2e-16 Score=94.87 Aligned_cols=90 Identities=27% Similarity=0.313 Sum_probs=75.3
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee--cC--CeEEEecCCCCCCeEEEEEEEc
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL--PS--RSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~--~~--~~l~i~~~~~~d~g~y~C~~~n 191 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .... .. ..|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 35667777788899999999999999999999999999998876543 2221 22 3799999999999999999999
Q ss_pred CCcceEEEEEEEEEe
Q psy573 192 AVGKISASATLTVQS 206 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~ 206 (216)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999998898888875
No 256
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.70 E-value=3.8e-16 Score=113.35 Aligned_cols=152 Identities=19% Similarity=0.276 Sum_probs=104.2
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcc-cCCCCCceEEEEEEcCCCCcccc
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQD-SRKTDDGRYQCVVKNVAGTREST 109 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~ 109 (216)
....+.+|+.+.|.|.+ .+.|.+.+.|++++..+........... ....|.|.+ +..+|+|.|+|.+.|..|.. ..
T Consensus 112 ~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~-~~ 189 (305)
T 2nzi_A 112 GAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGID-QK 189 (305)
T ss_dssp CCEEEETTCCEEEEEEE-EEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEE-EE
T ss_pred ccEEecCCCEEEEEEEE-CCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCce-ee
Confidence 45778899999999998 7888899999999887743322222222 235799999 99999999999999988764 44
Q ss_pred eeEEEEeecceEEeCCCceeE--eCCCcEEEEEEeC--------------CCCCcEEEEeeCCccCCCCCeeeecCCeEE
Q psy573 110 DAVLRVLVKPYIIRGPKDTTV--SAGSIIVFECSVG--------------GDAVLTVHWKRLGSAMPEDRMSVLPSRSLQ 173 (216)
Q Consensus 110 ~~~l~v~~~p~~~~~~~~~~~--~~g~~~~l~C~~~--------------~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~ 173 (216)
.+.|.|...|.. +....+ ..+..+.|.|... ..+.+...|.+.+. .....+.
T Consensus 190 ~~~l~v~~~P~~---p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~---------~~~~~~~ 257 (305)
T 2nzi_A 190 TVELDVADVPDP---PRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQ---------ARETRYT 257 (305)
T ss_dssp EEEEEEEBCCCC---CEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEE---------ESSSEEE
T ss_pred EEEEEEecCCCC---CCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECcc---------ccCceEE
Confidence 567777655421 111111 2345666666642 22222223333221 1256799
Q ss_pred EecCCCCCCeEEEEEEEcCCcceE
Q psy573 174 LSDVRLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 174 i~~~~~~d~g~y~C~~~n~~~~~~ 197 (216)
|.++...+.|.|+|.|.|..|...
T Consensus 258 i~~l~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 258 VINLFGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECC
T ss_pred ecCCCCCCeEEEEEEEEeCCcccC
Confidence 999999999999999999998744
No 257
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=3e-16 Score=96.37 Aligned_cols=94 Identities=30% Similarity=0.457 Sum_probs=78.0
Q ss_pred EeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecCC---eEEEecCCCCCCeEEEEEEE
Q psy573 115 VLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPSR---SLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 115 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~---~l~i~~~~~~d~g~y~C~~~ 190 (216)
+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +......+ .|.|.++..+|+|.|+|.+.
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 345677777888889999999999999999999999999999877643 33333333 79999999999999999999
Q ss_pred cCCcceEEEEEEEEEecc
Q psy573 191 NAVGKISASATLTVQSKY 208 (216)
Q Consensus 191 n~~~~~~~~~~l~v~~~p 208 (216)
|..|.....+.|.|.++|
T Consensus 90 n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp ETTEEEEEEEEEEEEC--
T ss_pred cCCCcEEEEEEEEEEcCC
Confidence 999999999999998765
No 258
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=97.08 Aligned_cols=93 Identities=24% Similarity=0.315 Sum_probs=77.9
Q ss_pred EeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeeec---CCeEEEecCCCCCCeEEEEEEE
Q psy573 115 VLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLP---SRSLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 115 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~---~~~l~i~~~~~~d~g~y~C~~~ 190 (216)
+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... +..... ...|.|.++..+|+|.|+|.+.
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 345677777788889999999999999999999999999999887654 332222 2369999999999999999999
Q ss_pred cCCcceEEEEEEEEEec
Q psy573 191 NAVGKISASATLTVQSK 207 (216)
Q Consensus 191 n~~~~~~~~~~l~v~~~ 207 (216)
|..|.....+.|.|.+.
T Consensus 85 N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 85 NYKGEASDYATLDVTGG 101 (103)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred eCCCcEEEEEEEEEECC
Confidence 99999999999988864
No 259
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.7e-16 Score=96.05 Aligned_cols=92 Identities=35% Similarity=0.493 Sum_probs=77.2
Q ss_pred EEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeee-cCCeEEEecCCCCCCeEEEEEEEcC
Q psy573 114 RVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVL-PSRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 114 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ....|.|.++..+|+|.|+|.+.|.
T Consensus 7 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 7 GMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp CCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred CcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEEC
Confidence 345677888788888999999999999999999999999999988765443332 3357999999999999999999999
Q ss_pred CcceEEEEEEEEE
Q psy573 193 VGKISASATLTVQ 205 (216)
Q Consensus 193 ~~~~~~~~~l~v~ 205 (216)
.|....++.|.|+
T Consensus 87 ~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 87 LGQVSCSAWVTVH 99 (99)
T ss_dssp SCEEEEECCEEEC
T ss_pred CCeEEEEEEEEEC
Confidence 9998888877763
No 260
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.69 E-value=2.7e-16 Score=94.10 Aligned_cols=88 Identities=22% Similarity=0.318 Sum_probs=72.0
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCC--ccCCCCCeeee--cCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLG--SAMPEDRMSVL--PSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+........ ....|.|.++..+|+|.|+|.+.|..
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 81 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNEL 81 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETT
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCC
Confidence 456655667778999999999999999999999999999 77654432222 23569999999999999999999999
Q ss_pred cceEEEEEEEEE
Q psy573 194 GKISASATLTVQ 205 (216)
Q Consensus 194 ~~~~~~~~l~v~ 205 (216)
|.....+.|.|+
T Consensus 82 G~~~~~~~l~V~ 93 (93)
T 1wit_A 82 GEDEAIFEVIVQ 93 (93)
T ss_dssp EEEEEEEEEEEC
T ss_pred CeEEEEEEEEEC
Confidence 998888888763
No 261
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=112.40 Aligned_cols=172 Identities=12% Similarity=0.233 Sum_probs=106.1
Q ss_pred cccceEEecCCcEEEEeeCCCC-CCCCeeEEeeCC--E---Ee------------ccccCceEEEec-----CcEEEEcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRG-HPEPTLVWKKNG--H---PI------------DFENSKRLRLVD-----GTNLAIQD 86 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~-~~~~~~~W~~~~--~---~~------------~~~~~~~~~~~~-----~~~l~i~~ 86 (216)
.+..+.+.+|++++|.|.+... .....+.||+.. . .+ .....+|+.... +.+|.|.+
T Consensus 29 q~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 108 (267)
T 3u1s_H 29 QSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRG 108 (267)
T ss_dssp ECCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECS
T ss_pred eeCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECC
Confidence 3445789999999999987221 234689999842 1 11 011234555432 23599999
Q ss_pred cCCCCCceEEEEEEc-------CC------------C-C----cccceeEEEEe----ecceEEeCCCceeEeCCCcEEE
Q psy573 87 SRKTDDGRYQCVVKN-------VA------------G-T----RESTDAVLRVL----VKPYIIRGPKDTTVSAGSIIVF 138 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~-------~~------------~-~----~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l 138 (216)
++.+|+|.|.|.+.+ .. . . .......|.|. .+|.+...........|+.+.|
T Consensus 109 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l 188 (267)
T 3u1s_H 109 LTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAAL 188 (267)
T ss_dssp CCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEEEE
T ss_pred CChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcEEE
Confidence 999999999999861 10 0 0 01223455554 2444543222233457899999
Q ss_pred EEEeCCC-C-CcEEEEeeCCccCCCCC----------eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 139 ECSVGGD-A-VLTVHWKRLGSAMPEDR----------MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 139 ~C~~~~~-p-~~~i~W~~~~~~~~~~~----------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
.|.+.+. | .+.+.| ++..+.... ......+.|.|.....+| +.|+|.+.|..+.......+.+
T Consensus 189 ~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 189 GCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 9999764 4 457999 554443210 011112358888888888 9999999998877665555443
No 262
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=5.9e-16 Score=96.80 Aligned_cols=94 Identities=18% Similarity=0.208 Sum_probs=77.2
Q ss_pred EeecceEEe---CCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeee-c--CCeEEEecCCCCCCeEEEEE
Q psy573 115 VLVKPYIIR---GPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVL-P--SRSLQLSDVRLEDGGEYVCE 188 (216)
Q Consensus 115 v~~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~-~--~~~l~i~~~~~~d~g~y~C~ 188 (216)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.|.+.|++++..+...+.... . ...|.|.++..+|+|.|+|.
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEE
Confidence 345666643 24567888999999999999999999999999998875444433 2 24599999999999999999
Q ss_pred EEcCCcceEEEEEEEEEecc
Q psy573 189 AENAVGKISASATLTVQSKY 208 (216)
Q Consensus 189 ~~n~~~~~~~~~~l~v~~~p 208 (216)
+.|..|.....+.|.|.++|
T Consensus 98 a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EECSSCEECCEEEEEEECCC
T ss_pred EEeCCCeEEEEEEEEEEcCC
Confidence 99999999999999998876
No 263
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=98.53 Aligned_cols=93 Identities=30% Similarity=0.511 Sum_probs=79.6
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC--CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE--DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. .+.....++.|.|.++..+|+|.|+|.+.|..|.
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 87 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGE 87 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCE
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCc
Confidence 45666667778899999999999999999999999999988753 4455556789999999999999999999999999
Q ss_pred eEEEEEEEEEeccee
Q psy573 196 ISASATLTVQSKYLK 210 (216)
Q Consensus 196 ~~~~~~l~v~~~p~~ 210 (216)
....+.|.|.+.+..
T Consensus 88 ~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 88 ATWSAYIEVQEFGVP 102 (118)
T ss_dssp EEEECCEEEECCSCC
T ss_pred EEEEEEEEEEeCCCC
Confidence 888999999876543
No 264
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.68 E-value=6.8e-16 Score=114.19 Aligned_cols=175 Identities=19% Similarity=0.260 Sum_probs=108.2
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCC-------------CCCeeEEeeC--CE--Eecc--c---------cCceEE--
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGH-------------PEPTLVWKKN--GH--PIDF--E---------NSKRLR-- 75 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~-------------~~~~~~W~~~--~~--~~~~--~---------~~~~~~-- 75 (216)
.+...+.++.+.+|++++|.|...... ....+.||+. ++ .+.. . ..++..
T Consensus 160 ~V~tq~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~ 239 (401)
T 3f8u_B 160 TVLTHTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFA 239 (401)
T ss_dssp EEEESCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEE
T ss_pred EEeCCCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEE
Confidence 334456678999999999999862221 1357899973 32 1110 0 111111
Q ss_pred ----------EecCcEEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCcee-EeCCC-cEEEEEEeC
Q psy573 76 ----------LVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTT-VSAGS-IIVFECSVG 143 (216)
Q Consensus 76 ----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~-~~~g~-~~~l~C~~~ 143 (216)
...+.+|.|.+++.+|+|.|.|.+.+..+.. ...+.|.|..+|.+...+.... +..|+ .+.|.|.+.
T Consensus 240 ~~~~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~-~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~ 318 (401)
T 3f8u_B 240 AWDDDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQG-QVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVS 318 (401)
T ss_dssp EESCCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEE
T ss_pred eecccccccccCCcEEEEECcCCHhhCceEEEEEEecccce-eEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEec
Confidence 1134689999999999999999998865543 4457788888888766554443 45676 799999997
Q ss_pred CC-CC--cEEEEe-eCCc---cCCCC------CeeeecCCe------EEEecCCC-CCCeEEEEEEEcCC---cceEEEE
Q psy573 144 GD-AV--LTVHWK-RLGS---AMPED------RMSVLPSRS------LQLSDVRL-EDGGEYVCEAENAV---GKISASA 200 (216)
Q Consensus 144 ~~-p~--~~i~W~-~~~~---~~~~~------~~~~~~~~~------l~i~~~~~-~d~g~y~C~~~n~~---~~~~~~~ 200 (216)
+. |. +.+.|. +++. ..... ......+++ |.+..... .+.+.|+|.+.|.. +..+.++
T Consensus 319 GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs~sV 398 (401)
T 3f8u_B 319 HFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEV 398 (401)
T ss_dssp EEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEEEEE
T ss_pred CCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcceEEE
Confidence 75 54 689995 7652 11111 111222333 33333322 24569999999986 4444444
Q ss_pred E
Q psy573 201 T 201 (216)
Q Consensus 201 ~ 201 (216)
+
T Consensus 399 t 399 (401)
T 3f8u_B 399 T 399 (401)
T ss_dssp E
T ss_pred E
Confidence 3
No 265
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.68 E-value=8.7e-19 Score=121.19 Aligned_cols=162 Identities=13% Similarity=0.216 Sum_probs=101.5
Q ss_pred EecccceEEecCCcEEEEeeCCCCC-C--CCeeEEeeCCEEeccc--------cCceEEEecCcEEEEcccCCCCCceEE
Q psy573 28 RVQPKSQRVAAGDTALLECGPPRGH-P--EPTLVWKKNGHPIDFE--------NSKRLRLVDGTNLAIQDSRKTDDGRYQ 96 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~~~-~--~~~~~W~~~~~~~~~~--------~~~~~~~~~~~~l~i~~~~~~d~g~y~ 96 (216)
...|....+.+|+.++|.|.+ .+. + .+.+.| ++ ..+... ..+.+ .....|.|.+++.+|+|.|.
T Consensus 8 ~~~P~~~~v~~G~~v~L~C~~-~g~~p~~~~~v~W-~~-~~~~~~~~~~~~~~~~g~~--~~~~~L~I~~~~~~D~g~Y~ 82 (214)
T 1ow0_A 8 LHRPALEDLLLGSEANLTCTL-TGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCY--SVSSVLPGCAEPWNHGKTFT 82 (214)
T ss_dssp EECCCHHHHHHCSSCCCEEEE-TTCCSCCCCCCCB-SS-CSSCCCEECCCCCCSTTCC--CEEEECTTTHHHHHHTCEEE
T ss_pred EECcChHHhccCCCcEEEEEE-eeeECCCCeEEEE-cC-CCCCCcccCCceECCCCcE--EEEEEEEEeHHHcCCCCeEE
Confidence 344666778899999999998 444 4 268999 43 332110 01111 11236888888899999999
Q ss_pred EEEEcCCCCcccceeEE---EEeecceEEeCC-CceeEeCCCcEEEEEEeCCC-CC-cEEEEeeCCccCCCCC-----ee
Q psy573 97 CVVKNVAGTRESTDAVL---RVLVKPYIIRGP-KDTTVSAGSIIVFECSVGGD-AV-LTVHWKRLGSAMPEDR-----MS 165 (216)
Q Consensus 97 C~~~~~~~~~~~~~~~l---~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~-----~~ 165 (216)
|.+.+..+.. .....+ .+..+|.+...+ ....+..|+.+.|.|.+.+. |. +.+.|++++..+.... ..
T Consensus 83 C~~~~~~~~~-~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 161 (214)
T 1ow0_A 83 CTAAYPESKT-PLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASR 161 (214)
T ss_dssp EEECCSSCSS-CEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCE
T ss_pred EEEecCCCCC-ceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCc
Confidence 9999876532 111222 224566654332 22345678899999999885 43 4899999998775432 12
Q ss_pred ee---cCCeEEE------ecCCCCCCeEEEEEEEcCCcc
Q psy573 166 VL---PSRSLQL------SDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 166 ~~---~~~~l~i------~~~~~~d~g~y~C~~~n~~~~ 195 (216)
.. .++++.+ .....++.|.|+|.|.|....
T Consensus 162 ~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 162 QEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp ECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred ccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 22 3343333 333334589999999998754
No 266
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.68 E-value=7.9e-16 Score=93.11 Aligned_cols=90 Identities=23% Similarity=0.361 Sum_probs=74.8
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC--eeeecCC---eEEEecCCCCCCeEEEEEEEc
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR--MSVLPSR---SLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~--~~~~~~~---~l~i~~~~~~d~g~y~C~~~n 191 (216)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ....... .|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 45677777788899999999999999999999999999998875432 2222222 699999999999999999999
Q ss_pred CCcceEEEEEEEEEe
Q psy573 192 AVGKISASATLTVQS 206 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~ 206 (216)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999998898888875
No 267
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=4.6e-16 Score=94.32 Aligned_cols=92 Identities=25% Similarity=0.475 Sum_probs=74.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc--EEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT--NLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+............++ .|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKV-SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEEC-EEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEE-EeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 5777778888999999999999998 6788899999999998865544444444443 899999999999999999999
Q ss_pred CCCCcccceeEEEEee
Q psy573 102 VAGTRESTDAVLRVLV 117 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~ 117 (216)
..|.. ...+.|.|..
T Consensus 84 ~~g~~-~~~~~l~V~~ 98 (100)
T 2kdg_A 84 RAGEA-TFTVQLDVLA 98 (100)
T ss_dssp TTEEE-EEEEEEEEEC
T ss_pred CCCeE-EEEEEEEEEe
Confidence 88764 4556666654
No 268
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=1.3e-15 Score=106.13 Aligned_cols=165 Identities=15% Similarity=0.165 Sum_probs=100.8
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCC--CCeeEEeeCC--E---Eec-------cccCceEEEec-----CcEEEEccc
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHP--EPTLVWKKNG--H---PID-------FENSKRLRLVD-----GTNLAIQDS 87 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~~--~---~~~-------~~~~~~~~~~~-----~~~l~i~~~ 87 (216)
+...|..+.+.+|+.++|.|.+ .+.+ ...+.||+.. . .+. ....+++.... ..+|.|.++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~-s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 82 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSM-KGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAP 82 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEE-CSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSC
T ss_pred cEeCCCEEEEcCCCCEEEEeEe-cCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcC
Confidence 4556777899999999999997 3322 4679999842 1 111 11234555542 237999999
Q ss_pred CCCCCceEEEEEEcCCC------C-cccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCC-CCc-EEEEeeCCcc
Q psy573 88 RKTDDGRYQCVVKNVAG------T-RESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD-AVL-TVHWKRLGSA 158 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~------~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~ 158 (216)
+.+|+|.|.|.+.+... . .......|.|.........|. ..+.. ..+.|.|.+.+. |.+ .+.|.++ ..
T Consensus 83 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~-v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~ 159 (229)
T 1hxm_A 83 SERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPS-VFVMK-NGTNVACLVKEFYPKDIRINLVSS-KK 159 (229)
T ss_dssp CGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCE-EEEEE-ETTEEEEEEESCBSSCCEEEEECS-SE
T ss_pred CHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCc-EEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CE
Confidence 99999999999987531 1 112234666654111111111 11111 124899999775 443 8999998 65
Q ss_pred CCCCC--eeeecCCeEEEecCC-CCCCeEEEEEEEcCCcc
Q psy573 159 MPEDR--MSVLPSRSLQLSDVR-LEDGGEYVCEAENAVGK 195 (216)
Q Consensus 159 ~~~~~--~~~~~~~~l~i~~~~-~~d~g~y~C~~~n~~~~ 195 (216)
+.... .....++++.+.... .++.|.|+|.+.|..+.
T Consensus 160 ~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~~ 199 (229)
T 1hxm_A 160 ITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNKT 199 (229)
T ss_dssp EEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTEE
T ss_pred EecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCCCC
Confidence 53221 112334566665433 36789999999998643
No 269
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.67 E-value=4.3e-16 Score=102.04 Aligned_cols=100 Identities=29% Similarity=0.434 Sum_probs=81.4
Q ss_pred EEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee--c--CCeEEEecCCCCCCeEEE
Q psy573 112 VLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL--P--SRSLQLSDVRLEDGGEYV 186 (216)
Q Consensus 112 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~--~--~~~l~i~~~~~~d~g~y~ 186 (216)
.+.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .... . ...|.|.++...|.|.|+
T Consensus 35 ~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 114 (154)
T 1fhg_A 35 EEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYT 114 (154)
T ss_dssp CCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEE
T ss_pred cccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEE
Confidence 4455667888888888899999999999999999999999999998876543 3332 1 247999999999999999
Q ss_pred EEEEcCCcceEEEEEEEEEecceee
Q psy573 187 CEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 187 C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|.+.|..|.....+.|.|..+|...
T Consensus 115 C~a~N~~G~~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 115 CKAVNSLGEATCTAELLVETMGKEG 139 (154)
T ss_dssp EEEEETTEEEEEEEEEEEECC----
T ss_pred EEEEECCCeEEEEEEEEEeCcCcCC
Confidence 9999999999999999999877654
No 270
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=6.7e-16 Score=93.61 Aligned_cols=92 Identities=32% Similarity=0.511 Sum_probs=75.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ...++....++.|.|.+++.+|+|.|+|.+.|..
T Consensus 8 ~P~i~~~p~~~~v~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 8 PPIILQGPANQTLAVDGTALLKCKA-TGDPLPVISWLKEGFTFPG-RDPRATIQEQGTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp SCEEEECCCCEEEESSSEEEECCEE-ECSSCCEEEEEESSSEESS-SCSSCEECTTCCEEEESCCTTTCCEEEEEEECSS
T ss_pred CCEEEeCcCCEEEcCCCcEEEEEEE-EEcCCCEEEEEECCEECCC-CCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCC
Confidence 5777778888899999999999998 7888899999999988742 2344455667789999999999999999999988
Q ss_pred CCcccceeEEEEeec
Q psy573 104 GTRESTDAVLRVLVK 118 (216)
Q Consensus 104 ~~~~~~~~~l~v~~~ 118 (216)
+.. ...+.|.|..+
T Consensus 86 g~~-~~~~~l~V~~~ 99 (100)
T 2edj_A 86 GET-SWSAVLDVTES 99 (100)
T ss_dssp CCC-BCCEEEEEESC
T ss_pred CCE-EEEEEEEEecC
Confidence 765 55667777654
No 271
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=92.42 Aligned_cols=90 Identities=30% Similarity=0.539 Sum_probs=75.3
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcC
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +...... ..|.|.++..+|+|.|+|.+.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 4567777778889999999999999999999999999999887543 3333322 26999999999999999999999
Q ss_pred CcceEEEEEEEEEe
Q psy573 193 VGKISASATLTVQS 206 (216)
Q Consensus 193 ~~~~~~~~~l~v~~ 206 (216)
.|.....+.|.|.+
T Consensus 85 ~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSSCKLTIKA 98 (99)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEeEEEEEEEEe
Confidence 99999898888864
No 272
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.66 E-value=6.1e-16 Score=92.90 Aligned_cols=85 Identities=18% Similarity=0.351 Sum_probs=70.9
Q ss_pred ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEE
Q psy573 119 PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISA 198 (216)
Q Consensus 119 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~ 198 (216)
|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+............|.|.++..+|+|.|+|.+.|..|....
T Consensus 10 p~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 88 (95)
T 2ckn_A 10 WGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTT 88 (95)
T ss_dssp CCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEE
T ss_pred CEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEE
Confidence 3444456677889999999999998887 799999999887654444445788999999999999999999999999888
Q ss_pred EEEEEE
Q psy573 199 SATLTV 204 (216)
Q Consensus 199 ~~~l~v 204 (216)
.+.|.|
T Consensus 89 ~~~l~V 94 (95)
T 2ckn_A 89 YFSVNV 94 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887766
No 273
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=6.8e-16 Score=96.52 Aligned_cols=93 Identities=28% Similarity=0.515 Sum_probs=76.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ...++....++.|.|.+++.+|+|.|+|.+.|..
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~g~~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVA-TGSPVPTILWRKDGVLVST-QDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPS 85 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBC-CCSSCCEEEEEESSSBCCT-TSTTEEEEETTEEEEESCCGGGCCCEEEEEECSS
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEE-EecCCCEEEEEECCEECcC-CCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCC
Confidence 5777778888999999999999998 7888899999999887743 3344555667799999999999999999999988
Q ss_pred CCcccceeEEEEeecc
Q psy573 104 GTRESTDAVLRVLVKP 119 (216)
Q Consensus 104 ~~~~~~~~~l~v~~~p 119 (216)
+.. ...+.|.|...+
T Consensus 86 g~~-~~~~~l~V~~~~ 100 (118)
T 2eo9_A 86 GEA-TWSAYIEVQEFG 100 (118)
T ss_dssp CEE-EEECCEEEECCS
T ss_pred CcE-EEEEEEEEEeCC
Confidence 764 445677776654
No 274
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.66 E-value=9.3e-15 Score=97.61 Aligned_cols=159 Identities=15% Similarity=0.216 Sum_probs=103.6
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeC-CEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKN-GHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAG 104 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 104 (216)
+.+.|+...+.+|+++.|+|.+ .. +.+ .+.|... ++....... .....|.|.+++. | |.|.|.+....
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~-~c-~~p~~~~~~t~l~~~~~~~~~-----~~~~~l~l~~vs~-~-g~y~C~~~c~~- 71 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCST-SC-DQPKLLGIETPLPKKELLLPG-----NNRKVYELSNVQE-D-SQPMCYSNCPD- 71 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEE-CS-SSCSEEEEECSSCEEEECSSS-----SSEEEEEEEEECS-C-BCCEEEEECSS-
T ss_pred eEEECCCcEEeCCCCEEEEEEc-cC-CCCccceEEeeCCCccEeccC-----CceeEEEEEecCc-C-CEEEEEEECCC-
Confidence 4456777789999999999998 33 334 4677532 111100000 0113588999974 4 99999986543
Q ss_pred CcccceeEEEEeecce-EEeCCCceeEeCCCcEEEEEEeCCC-CCc--EEEEeeCCccCCCCCee-eecCCeEEEecCCC
Q psy573 105 TRESTDAVLRVLVKPY-IIRGPKDTTVSAGSIIVFECSVGGD-AVL--TVHWKRLGSAMPEDRMS-VLPSRSLQLSDVRL 179 (216)
Q Consensus 105 ~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~i~W~~~~~~~~~~~~~-~~~~~~l~i~~~~~ 179 (216)
......+.|.|..+|. +.+.+....+.+|+.++|.|.+.+. |.. +|.|++++..+...... .....++.+.....
T Consensus 72 ~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~~~~re 151 (185)
T 1iam_A 72 GQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRD 151 (185)
T ss_dssp CEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSS
T ss_pred CceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEEeceec
Confidence 3456678888887774 4455555568999999999999774 543 58999998876421100 00113466665555
Q ss_pred CCCeEEEEEEEcCCcc
Q psy573 180 EDGGEYVCEAENAVGK 195 (216)
Q Consensus 180 ~d~g~y~C~~~n~~~~ 195 (216)
+|...|+|.|.|..+.
T Consensus 152 D~g~~~sC~A~~~l~~ 167 (185)
T 1iam_A 152 HHGAQFSCRTELDLRP 167 (185)
T ss_dssp CSSCEEEEEEEEECGG
T ss_pred cCCCeEEEEEEecCcc
Confidence 5555999999998773
No 275
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=8.3e-16 Score=94.89 Aligned_cols=95 Identities=25% Similarity=0.417 Sum_probs=78.1
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC--CCeeeec--CC--eEEEecCCCCCCeEEEEEEE
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE--DRMSVLP--SR--SLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~~--~~--~l~i~~~~~~d~g~y~C~~~ 190 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+..... .+ .|.|.++..+|.|.|+|.+.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 356666667778899999999999999999999999999988764 2333322 22 69999999999999999999
Q ss_pred cCCcceEEEEEEEEEecceee
Q psy573 191 NAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 191 n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|..|.....+.|.|..+|..+
T Consensus 87 N~~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp CTTCCEEECCCEEEECCSCCS
T ss_pred ECCCeEEEEEEEEEECCCCCC
Confidence 999999999999999876543
No 276
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=1.7e-15 Score=91.77 Aligned_cols=89 Identities=26% Similarity=0.493 Sum_probs=73.8
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC---CCeeeecC---CeEEEecCCCCCCeEEEEEEEc
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE---DRMSVLPS---RSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~---~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n 191 (216)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+...... ..|.|.++..+|.|.|+|.+.|
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 84 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEe
Confidence 45566666777899999999999999999999999999987753 23333332 6799999999999999999999
Q ss_pred CCcceEEEEEEEEEe
Q psy573 192 AVGKISASATLTVQS 206 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~ 206 (216)
..|.....+.|.|.+
T Consensus 85 ~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 85 EFGSDSATVNIHIRS 99 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEEe
Confidence 999998888888864
No 277
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=95.10 Aligned_cols=95 Identities=33% Similarity=0.580 Sum_probs=75.8
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC--c--EEEEcccCCCCCceEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG--T--NLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~--~l~i~~~~~~d~g~y~C~ 98 (216)
.+|.|...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..++....+ + .|.|.+++.+|+|.|+|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~-~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQI-SAIPPPKLFWKRNNEMVQFN-TDRISLYQDNTGRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEB-CCBSCCEEEEEETTEECCCC-BTTEEEEECTTCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEE-eccCCCEEEEEECCEECcCC-CCeEEEEeCCCCeEEEEECCCCcccCEEEEEE
Confidence 35788888999999999999999998 78888999999999987532 233333322 2 799999999999999999
Q ss_pred EEcCCCCcccceeEEEEeecce
Q psy573 99 VKNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~~~p~ 120 (216)
+.|..|.. ...+.|.|..+|.
T Consensus 92 a~N~~G~~-~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 92 AVNEAGVT-TCNTRLDVTARPN 112 (116)
T ss_dssp EEETTEEE-EEEEEEEEECCSC
T ss_pred EEcCCCeE-EEEEEEEEeCCCC
Confidence 99988765 4567777776653
No 278
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=1.4e-15 Score=91.94 Aligned_cols=92 Identities=26% Similarity=0.326 Sum_probs=71.4
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC--cEEEEcccCCCCCceEEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG--TNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~y~C~~~ 100 (216)
.+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+............+ ..|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRV-VGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEE-EEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 35788888888999999999999998 688899999999999885433222222222 379999999999999999999
Q ss_pred cCCCCcccceeEEEEe
Q psy573 101 NVAGTRESTDAVLRVL 116 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~ 116 (216)
|..|.. ...+.|.|.
T Consensus 83 N~~g~~-~~~~~l~V~ 97 (99)
T 1g1c_A 83 NIAGET-SSHAFLLVQ 97 (99)
T ss_dssp ETTEEE-EEEEEEEEE
T ss_pred ECCCcE-EEEEEEEEe
Confidence 987765 335556554
No 279
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=3.9e-16 Score=96.35 Aligned_cols=95 Identities=28% Similarity=0.452 Sum_probs=78.9
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCe-ee--ecC--CeEEEecCCCCCCeEEEEEEEc
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRM-SV--LPS--RSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~--~~~--~~l~i~~~~~~d~g~y~C~~~n 191 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .. ... ..|.|.++..+|.|.|+|.+.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 356777777888999999999999999999999999999987764322 21 122 3799999999999999999999
Q ss_pred CCcceEEEEEEEEEecceee
Q psy573 192 AVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~~p~~~ 211 (216)
..|.....+.|.|..+|..+
T Consensus 88 ~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp SSCEEEECCEEEEECCCCSS
T ss_pred CCCEEEEEEEEEEeCCCCCC
Confidence 99999999999999877543
No 280
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=1.4e-15 Score=94.45 Aligned_cols=94 Identities=27% Similarity=0.380 Sum_probs=75.4
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec---CcEEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.|...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ++.... ...|.|.+++.+|+|.|+|.+
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKV-TGTQPITCTWMKFRKQIQESE--HMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEE-ESSSSCEEEEEESSSBCCCSS--SEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEE-EcCCCCEEEEEECCEECcCCC--CEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 35777778888999999999999998 788899999999998774332 333332 357999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecce
Q psy573 100 KNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p~ 120 (216)
.|..+.. ...+.|.|...|.
T Consensus 83 ~N~~g~~-~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 83 ENKLGSR-QAQVNLTVVDKPD 102 (114)
T ss_dssp ECSSCEE-ECCEEEEEECSCS
T ss_pred EECCCcE-EEEEEEEEECCCC
Confidence 9988865 4567888876654
No 281
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=1.5e-15 Score=91.91 Aligned_cols=88 Identities=24% Similarity=0.372 Sum_probs=69.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~ 100 (216)
++.|...+.+..+.+|+.+.|.|.+ .|.+.+.||++|..+... .++.+..+ ..|.|.++..+|+|.|+|.+.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~~~--~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI---SENIPGKWTKNGLPVQES--DRLKVVQKGRIHKLVIANALTEDEGDYVFAPD 81 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC---SSCCCEEEEETTEECCCC--SSEEEEECSSEEEEEESSCCGGGCSEEEEEES
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe---CCCCeEEEEECCEECCCC--CcEEEEEeCCEEEEEECCCChhhCEEEEEEEc
Confidence 5677778888999999999999997 577899999999988533 33333322 379999999999999999999
Q ss_pred cCCCCcccceeEEEEeecc
Q psy573 101 NVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~~~p 119 (216)
|. .......|.|..+|
T Consensus 82 N~---~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 82 AY---NVTLPAKVHVISGP 97 (100)
T ss_dssp SS---CCCEEEEEEEECCS
T ss_pred CC---CeeEEEEEEEeCCC
Confidence 87 23456778887765
No 282
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.64 E-value=7.6e-16 Score=94.56 Aligned_cols=95 Identities=33% Similarity=0.532 Sum_probs=74.2
Q ss_pred EeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc---EEEEcccCCCCCceEEE
Q psy573 21 EMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT---NLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~y~C 97 (216)
...+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ..++....++ .|.|.+++.+|+|.|+|
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 86 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLAA--SERLSFPADGAEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCC--CSSEECCEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEE-eecCCCEEEEEECCeECCC--CCcEEEEeCCCEEEEEEccCCHHhCEEEEE
Confidence 3457888888989999999999999998 7788889999999988743 2333333333 79999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeecc
Q psy573 98 VVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~p 119 (216)
.+.|..+.. ...+.|.|..+|
T Consensus 87 ~a~n~~g~~-~~~~~l~V~~~P 107 (107)
T 3irg_B 87 RARNAAGEA-YAAAAVTVLEPP 107 (107)
T ss_dssp EEEETTEEE-EEEEEEEEEC--
T ss_pred EEEcCCCcE-EEEEEEEEEcCC
Confidence 999987764 455677766543
No 283
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.64 E-value=2.8e-15 Score=121.10 Aligned_cols=163 Identities=20% Similarity=0.264 Sum_probs=110.9
Q ss_pred CCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEccc-CCCCCceEEEEEEcCCCCcccceeEEEE--
Q psy573 39 GDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDS-RKTDDGRYQCVVKNVAGTRESTDAVLRV-- 115 (216)
Q Consensus 39 G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~~~~~~~~~~~~~l~v-- 115 (216)
+..+.|.|.+ .+.|.+.+.|.++|..+..... ..+.|..+ .....+.|.|.+.+..|......+.+..
T Consensus 91 ~g~l~v~c~~-~g~P~p~i~W~k~g~~~~~~~~--------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~ 161 (731)
T 2v5y_A 91 PGLLNVYVKV-NNGPLGNPIWNISGDPTRTWNR--------AELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHP 161 (731)
T ss_dssp SEEEEEEEEE-TTCCCCSEEEEECCCCCSSCEE--------EEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSC
T ss_pred cceEEEEEec-CCCCccceeEEEeCCcCCceeE--------EEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecc
Confidence 3478999998 7889999999999876522111 12444433 2222356777555554433222222222
Q ss_pred -eecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEE-Ee--eCCccCCCCCeeeec----CCeEEEecCCCCCCeEEEE
Q psy573 116 -LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVH-WK--RLGSAMPEDRMSVLP----SRSLQLSDVRLEDGGEYVC 187 (216)
Q Consensus 116 -~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~-W~--~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C 187 (216)
..+|.+. .+....+..|+.+.|.|.+.+.|.|.+. |+ +++..+......... .+.|.|.++...|.|.|+|
T Consensus 162 ~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c 240 (731)
T 2v5y_A 162 CTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRC 240 (731)
T ss_dssp CSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEE
T ss_pred cccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEE
Confidence 1345554 4567889999999999999999999877 88 666655332211111 2579999999999999999
Q ss_pred EEEcCCcc-eEEEEEEEEEecceee
Q psy573 188 EAENAVGK-ISASATLTVQSKYLKV 211 (216)
Q Consensus 188 ~~~n~~~~-~~~~~~l~v~~~p~~~ 211 (216)
.+.|..|. .+..+.|.|..+|.+.
T Consensus 241 ~A~n~~G~~~s~~~~l~V~~~P~~~ 265 (731)
T 2v5y_A 241 MIRTEGGVGISNYAELVVKEPPVPI 265 (731)
T ss_dssp EEEETTEEEECCCEEEEEECCCCBS
T ss_pred EEECCCCCcceeeEEEEEecCCCCC
Confidence 99999998 7777888888877653
No 284
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.63 E-value=1.5e-15 Score=93.36 Aligned_cols=101 Identities=20% Similarity=0.356 Sum_probs=66.1
Q ss_pred ceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceE
Q psy573 16 KKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRY 95 (216)
Q Consensus 16 ~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 95 (216)
++|.+.. +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... ......+..|.|.+++.+|+|.|
T Consensus 3 ~~v~~~~-~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y 79 (108)
T 3kvq_A 3 LTVLERV-APTITGNLENQTTSIGESIEVSCTA-SGNPPPQIMWFKDNETLVEDSG-IVLKDGNRNLTIRRVRKEDEGLY 79 (108)
T ss_dssp ---------CCCBSCCCCEEEETTCCEEEECBC-C----CCEEEEESSSBCCCBTT-EEEETTTTEEEECSCCGGGCEEE
T ss_pred eeECccC-CCceecCCCCeEEeCCCeEEEEEEC-cCcCCCeEEEEECCeEcccCCC-eEEeCCCcEEEEeecCcccCEEE
Confidence 3444433 5788888888999999999999998 7788889999999887743222 22233457899999999999999
Q ss_pred EEEEEcCCCCcccceeEEEEeecce
Q psy573 96 QCVVKNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 96 ~C~~~~~~~~~~~~~~~l~v~~~p~ 120 (216)
+|.+.|..|.. ...+.|.|..+|.
T Consensus 80 ~C~a~n~~g~~-~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 80 TCQACSVLGCA-KVEAFFIIEGAQE 103 (108)
T ss_dssp EEEEC----CE-EEEEEEEEEC---
T ss_pred EEEEEeCCCce-EEEEEEEEeCCCc
Confidence 99999987765 4456777776553
No 285
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.63 E-value=2.1e-15 Score=91.87 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=66.2
Q ss_pred eCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCee---e--ec----CCeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 131 SAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMS---V--LP----SRSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 131 ~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~---~--~~----~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
..++.+.|.|.+.|.|.|.+.|++++..+...... . .. .+.|.|.++..+|+|.|+|.+.|..|....++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 45778999999999999999999999887655321 1 11 234999999999999999999999999999999
Q ss_pred EEEEecce
Q psy573 202 LTVQSKYL 209 (216)
Q Consensus 202 l~v~~~p~ 209 (216)
|.|.+.|.
T Consensus 94 l~V~~~P~ 101 (103)
T 1wwb_X 94 AHFMGWPG 101 (103)
T ss_dssp ECCSCCCC
T ss_pred EEECCCCC
Confidence 99988774
No 286
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.63 E-value=2.6e-15 Score=90.81 Aligned_cols=90 Identities=27% Similarity=0.492 Sum_probs=70.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc---EEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT---NLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~y~C~~~ 100 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... .++....+. .|.|.+++.+|+|.|+|.+.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRV-QGEPKPVVSWLRNRQPVRPDQ-RRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEE-EEESCCEEEEEETTEECCCBT-TEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEE-EEcCCCEEEEEECCEECCCCC-CEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 5788888888999999999999998 778889999999999875332 333333222 69999999999999999999
Q ss_pred cCCCCcccceeEEEEe
Q psy573 101 NVAGTRESTDAVLRVL 116 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~ 116 (216)
|..+.. ...+.|.|.
T Consensus 83 N~~g~~-~~~~~l~V~ 97 (99)
T 1u2h_A 83 NEYGAR-QCEARLEVR 97 (99)
T ss_dssp ETTEEE-EEEEEEEEE
T ss_pred ECCCce-eEEEEEEEE
Confidence 987764 344566554
No 287
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=2.2e-15 Score=96.52 Aligned_cols=81 Identities=26% Similarity=0.437 Sum_probs=66.2
Q ss_pred CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCC----------------------------ccC--CCCCeeeecC---Ce
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLG----------------------------SAM--PEDRMSVLPS---RS 171 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~----------------------------~~~--~~~~~~~~~~---~~ 171 (216)
+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+ ...+...... ..
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 46678999999999999999999999999998 333 1223333221 36
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 172 LQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999988888875
No 288
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.2e-15 Score=91.26 Aligned_cols=88 Identities=24% Similarity=0.413 Sum_probs=71.5
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+.+..+.+|+.+.|.|.+ .|.+.+.|+|++..+... +...... ..|.|.++..+|+|.|+|.+.|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~- 83 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY- 83 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS-
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC-
Confidence 3455666778899999999999999 788899999999988643 4444333 36999999999999999999998
Q ss_pred cceEEEEEEEEEecce
Q psy573 194 GKISASATLTVQSKYL 209 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~ 209 (216)
..+.++.|.|.++|.
T Consensus 84 -~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 -NVTLPAKVHVISGPS 98 (100)
T ss_dssp -CCCEEEEEEEECCSC
T ss_pred -CeeEEEEEEEeCCCC
Confidence 556778888888774
No 289
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.62 E-value=9.8e-15 Score=87.92 Aligned_cols=86 Identities=19% Similarity=0.290 Sum_probs=71.3
Q ss_pred EEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCccCCCC-Ceee-ecCC--eEEEecCCCCCCeEEEEEEEcCCcc
Q psy573 121 IIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSAMPED-RMSV-LPSR--SLQLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 121 ~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~-~~~~-~~~~--~l~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
+...+....+.+|+.+.|.|.+.+. |.+.+.|++++..+... +... ...+ .|.|.++..+|.|.|+|.+.|..|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 3445677889999999999999997 89999999999877643 3332 2333 7999999999999999999999999
Q ss_pred eEEEEEEEEEe
Q psy573 196 ISASATLTVQS 206 (216)
Q Consensus 196 ~~~~~~l~v~~ 206 (216)
....+.|.|.+
T Consensus 84 ~~~~~~l~V~~ 94 (97)
T 2bk8_A 84 DSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEETT
T ss_pred EeEEEEEEEEe
Confidence 98888888864
No 290
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.62 E-value=7.4e-15 Score=90.28 Aligned_cols=87 Identities=22% Similarity=0.311 Sum_probs=68.4
Q ss_pred ceEEeCCCceeEeCCCcEEEEEEeCCCCC---cEEEEeeCCccC----CCCCeeee---------cCCeEEEecCCCCCC
Q psy573 119 PYIIRGPKDTTVSAGSIIVFECSVGGDAV---LTVHWKRLGSAM----PEDRMSVL---------PSRSLQLSDVRLEDG 182 (216)
Q Consensus 119 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~----~~~~~~~~---------~~~~l~i~~~~~~d~ 182 (216)
|.+...+....+.+|+.+.|.|.+.+.|. |.+.|+|++... ...+.... ....|.|.+++.+|+
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 84 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFT 84 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGC
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccC
Confidence 45556677788999999999999999988 999999976211 11122211 135799999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEE
Q psy573 183 GEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
|.|+|.+.|..|..+..+.|.|.
T Consensus 85 G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 85 GSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999998886
No 291
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.62 E-value=2.1e-15 Score=91.35 Aligned_cols=91 Identities=23% Similarity=0.452 Sum_probs=72.6
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~ 100 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....+ ..|.|.++..+|+|.|+|.+.
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAF-TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEE-EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEE-EEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 5677777888899999999999998 778889999999999885444445555443 579999999999999999999
Q ss_pred cCCCCcccceeEEEEe
Q psy573 101 NVAGTRESTDAVLRVL 116 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~ 116 (216)
|..+.. ...+.|.|.
T Consensus 84 n~~g~~-~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSD-SATVNIHIR 98 (100)
T ss_dssp ETTEEE-EEEEEEEEE
T ss_pred eCCCcE-EEEEEEEEE
Confidence 987763 445555553
No 292
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.62 E-value=4.6e-15 Score=90.37 Aligned_cols=92 Identities=23% Similarity=0.334 Sum_probs=72.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+............ ...|.|.++..+|+|.|+|.+.|.
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNV-QSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEE-EecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 5788888888999999999999998 78899999999999988543322222221 237999999999999999999998
Q ss_pred CCCcccceeEEEEee
Q psy573 103 AGTRESTDAVLRVLV 117 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~ 117 (216)
.|.. ...+.|.|..
T Consensus 87 ~G~~-~~~~~l~V~~ 100 (103)
T 3qp3_A 87 KGEA-SDYATLDVTG 100 (103)
T ss_dssp TEEE-EEEEEEEEEC
T ss_pred CCcE-EEEEEEEEEC
Confidence 7765 4456666654
No 293
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=9e-16 Score=94.70 Aligned_cols=95 Identities=27% Similarity=0.542 Sum_probs=75.5
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC--cEEEEcccCCCCCceEEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG--TNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~y~C~~~ 100 (216)
.+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+............+ ..|.|.+++.+|+|.|+|.+.
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKV-SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEE-ECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEE-EEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 36788888888999999999999998 788889999999988775433333333333 389999999999999999999
Q ss_pred cCCCCcccceeEEEEeecc
Q psy573 101 NVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~~~p 119 (216)
|..+.. ...+.|.|..+|
T Consensus 87 n~~g~~-~~~~~l~V~~~p 104 (110)
T 2dm3_A 87 NRAGQN-SFSLELVVAAKE 104 (110)
T ss_dssp CSSCEE-EECCEEEEECCC
T ss_pred CCCCEE-EEEEEEEEeCCC
Confidence 988764 556777777654
No 294
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.61 E-value=1.2e-15 Score=93.52 Aligned_cols=89 Identities=34% Similarity=0.559 Sum_probs=74.6
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeeec---CCeEEEecCCCCCCeEEEEEEEcC
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLP---SRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +..... ...|.|.++..+|+|.|+|.+.|.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 92 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENS 92 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCS
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeC
Confidence 3466677788889999999999999999999999999999877543 333322 367999999999999999999999
Q ss_pred CcceEEEEEEEEE
Q psy573 193 VGKISASATLTVQ 205 (216)
Q Consensus 193 ~~~~~~~~~l~v~ 205 (216)
.|.....+.|.|.
T Consensus 93 ~G~~~~~~~l~V~ 105 (106)
T 1nct_A 93 EGKQEAEFTLTIQ 105 (106)
T ss_dssp SCBCCEEEEEEEC
T ss_pred CCeEEEEEEEEEE
Confidence 9998888888774
No 295
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.61 E-value=3.9e-15 Score=97.48 Aligned_cols=99 Identities=23% Similarity=0.397 Sum_probs=74.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC--cEEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG--TNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.||+++..+............+ ..|.|.+++..|+|.|+|.+.|
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 119 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKV-EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEE-EEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEE
Confidence 5788888888999999999999998 778889999999999885432222222222 4899999999999999999999
Q ss_pred CCCCcccceeEEEEeecceEEeC
Q psy573 102 VAGTRESTDAVLRVLVKPYIIRG 124 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p~~~~~ 124 (216)
..|.. ...+.|.|..+|.....
T Consensus 120 ~~G~~-~~~~~l~V~~~p~~~~~ 141 (154)
T 1fhg_A 120 SLGEA-TCTAELLVETMGKEGEG 141 (154)
T ss_dssp TTEEE-EEEEEEEEECC------
T ss_pred CCCeE-EEEEEEEEeCcCcCCCC
Confidence 88764 55678888877755433
No 296
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.61 E-value=3.5e-15 Score=93.16 Aligned_cols=78 Identities=23% Similarity=0.284 Sum_probs=66.2
Q ss_pred CCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCee-e--e--------cCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 132 AGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMS-V--L--------PSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 132 ~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~-~--~--------~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
.+..+.|.|.+.|.|.|.|.|+|+|..+...... . . ..+.|.|.++...|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 5678999999999999999999999988764321 1 1 125799999999999999999999999999999
Q ss_pred EEEEEecce
Q psy573 201 TLTVQSKYL 209 (216)
Q Consensus 201 ~l~v~~~p~ 209 (216)
.|.|...|.
T Consensus 94 ~l~v~~~P~ 102 (126)
T 1he7_A 94 MAAFMDNPF 102 (126)
T ss_dssp EECCCSCTT
T ss_pred EEEEEcCCC
Confidence 998887664
No 297
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=5.8e-15 Score=91.05 Aligned_cols=93 Identities=24% Similarity=0.377 Sum_probs=73.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe--cCc--EEEEcccCCCCCceEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV--DGT--NLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~~~--~l~i~~~~~~d~g~y~C~~ 99 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... .++... .++ .|.|.+++.+|+|.|+|.+
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 8 APFFEMKLKHYKIFEGMPVTFTCRV-AGNPKPKIYWFKDGKQISPKS-DHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp CCCBSSCCCCEEEETTCCEEEEEEB-CCSSCCEEEEECSSCBCCTTC-SSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCEEEecCcCeEEeCCCeEEEEEEE-EecCCCEEEEEECCEECCCCC-CeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 5777778888899999999999998 788889999999998875322 233332 233 6999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecc
Q psy573 100 KNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p 119 (216)
.|..+.. ...+.|.|...|
T Consensus 86 ~N~~g~~-~~~~~l~V~~~~ 104 (110)
T 2dm2_A 86 ANPQGRI-SCTGRLMVQAVN 104 (110)
T ss_dssp ECTTCCE-EECCCEEEECCS
T ss_pred EECCCeE-EEEEEEEEECCC
Confidence 9988875 455677776554
No 298
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=3.8e-15 Score=90.11 Aligned_cols=83 Identities=18% Similarity=0.412 Sum_probs=69.2
Q ss_pred CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 126 KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
....+.+|+.+.|.|.+.+.| +.+.|++++..+............|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 89 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS 89 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBC
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEe
Confidence 345678899999999998876 7999999998876544333346789999999999999999999999998888888887
Q ss_pred ecce
Q psy573 206 SKYL 209 (216)
Q Consensus 206 ~~p~ 209 (216)
..|.
T Consensus 90 ~~~~ 93 (99)
T 2cr3_A 90 DALP 93 (99)
T ss_dssp SCCS
T ss_pred cCCC
Confidence 6553
No 299
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2e-15 Score=91.30 Aligned_cols=89 Identities=31% Similarity=0.565 Sum_probs=70.0
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
.+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..........|.|.++..+|+|.|+|.+.|.
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSV-RGTPVPRITWLLNGQPIQYA--RSTCEAGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEE-EEESCCCCEEEESSSBCSSC--CCEEETTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEE-eeeCCCeEEEEECCEECccc--ceEeeCCeEEEEECCCChhhCEEEEEEEEEC
Confidence 35788888888999999999999998 77888999999998877422 2222333468999999999999999999998
Q ss_pred CCCcccceeEEEE
Q psy573 103 AGTRESTDAVLRV 115 (216)
Q Consensus 103 ~~~~~~~~~~l~v 115 (216)
.+.. ...+.|.|
T Consensus 87 ~g~~-~~~~~l~V 98 (99)
T 2yr3_A 87 LGQV-SCSAWVTV 98 (99)
T ss_dssp SCEE-EEECCEEE
T ss_pred CCeE-EEEEEEEE
Confidence 8764 33444444
No 300
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=86.38 Aligned_cols=83 Identities=18% Similarity=0.360 Sum_probs=68.4
Q ss_pred ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceE-
Q psy573 119 PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKIS- 197 (216)
Q Consensus 119 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~- 197 (216)
+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.|..|...
T Consensus 4 ~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s 78 (91)
T 3bfo_A 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDS 78 (91)
T ss_dssp CEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-----CSSEEEESSCCGGGCEEEEEEEECSSCEEEC
T ss_pred eEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-----CCCeEEECCCCHHhCEEEEEEEEcCCCCEEe
Confidence 45556677788999999999999999999999999999876543 246799999999999999999999999743
Q ss_pred EEEEEEEEe
Q psy573 198 ASATLTVQS 206 (216)
Q Consensus 198 ~~~~l~v~~ 206 (216)
..+.|.|.+
T Consensus 79 ~~~~l~V~~ 87 (91)
T 3bfo_A 79 KKVEIIIDE 87 (91)
T ss_dssp CCEEEEEC-
T ss_pred eeEEEEEeh
Confidence 556666654
No 301
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=4.4e-15 Score=92.80 Aligned_cols=87 Identities=22% Similarity=0.258 Sum_probs=69.2
Q ss_pred eEEeCCCceeEeCCCcEEEEEEeCCC---CCcEEEEeeCCccC----CCCCeeee---------cCCeEEEecCCCCCCe
Q psy573 120 YIIRGPKDTTVSAGSIIVFECSVGGD---AVLTVHWKRLGSAM----PEDRMSVL---------PSRSLQLSDVRLEDGG 183 (216)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~i~W~~~~~~~----~~~~~~~~---------~~~~l~i~~~~~~d~g 183 (216)
.+...|....+.+|+.+.|.|.+.+. |.|.+.|+|+.... ...+..+. ....|.|.++...|+|
T Consensus 9 ~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG 88 (126)
T 2dav_A 9 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAG 88 (126)
T ss_dssp SCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCE
T ss_pred EEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCE
Confidence 34556778899999999999999764 88999999974211 11222221 1367999999999999
Q ss_pred EEEEEEEcCCcceEEEEEEEEEe
Q psy573 184 EYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 184 ~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
.|+|.+.|..|..+.+++|.|.+
T Consensus 89 ~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 89 NYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999998
No 302
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.60 E-value=7.9e-15 Score=87.98 Aligned_cols=83 Identities=20% Similarity=0.372 Sum_probs=69.2
Q ss_pred CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
+....+.+|+.+.|.|.+.+ .|.+.|++++..+............|.|.++..+|+|.|+|.+.|..|.....+.|.|
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 85 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNV 85 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEE
Confidence 45567889999999999986 5799999999887655444445678999999999999999999999999999999999
Q ss_pred Eecce
Q psy573 205 QSKYL 209 (216)
Q Consensus 205 ~~~p~ 209 (216)
.+++.
T Consensus 86 ~~~~~ 90 (95)
T 4hwu_A 86 TDAAE 90 (95)
T ss_dssp CCC--
T ss_pred eCCcc
Confidence 87654
No 303
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.59 E-value=1.6e-14 Score=86.14 Aligned_cols=87 Identities=20% Similarity=0.188 Sum_probs=65.1
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEc
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.++.|...+.+..+.+|+.+.|.|.+ .+ +.+.+.||++|..+.......+.... ...|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v-~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIEL-SE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEE-SS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEE-CC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 35778888889999999999999998 44 45789999999988543332222222 23799999999999999999976
Q ss_pred CCCCcccceeEEEEe
Q psy573 102 VAGTRESTDAVLRVL 116 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~ 116 (216)
. ..+..|.|.
T Consensus 82 ~-----~~sa~L~V~ 91 (93)
T 1waa_A 82 T-----KSAANLKVK 91 (93)
T ss_dssp E-----EEEEEEEEE
T ss_pred C-----cEEEEEEEE
Confidence 3 234455554
No 304
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.59 E-value=3.4e-15 Score=102.64 Aligned_cols=111 Identities=43% Similarity=0.861 Sum_probs=82.7
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|...++.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+.... .+.. ..++.|.|.++..+|+
T Consensus 100 ~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~-~~~~-~~~~~L~i~~~~~~d~ 177 (212)
T 2v9r_A 100 SHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD-ERIT-IRGGKLMITYTRKSDA 177 (212)
T ss_dssp CCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS-TTEE-EETTEEEESSCCGGGC
T ss_pred ecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc-ceEE-ccCCeEEEeeCCHhhC
Confidence 4566777777777777778888999999999999875677888999999999885332 2233 3456899999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecceEEeCC
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGP 125 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~ 125 (216)
|.|+|.+.|..|...+..+.|.|..+|.+...|
T Consensus 178 G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 178 GKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred eeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 999999999887655556788998888766544
No 305
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.59 E-value=2.4e-14 Score=88.69 Aligned_cols=98 Identities=29% Similarity=0.425 Sum_probs=77.5
Q ss_pred cceeEEEEeec-ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC-CCeeeecCC---eEEEecCCCCCC
Q psy573 108 STDAVLRVLVK-PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE-DRMSVLPSR---SLQLSDVRLEDG 182 (216)
Q Consensus 108 ~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~~---~l~i~~~~~~d~ 182 (216)
...+.|.|... |.+...+....+.+|+.+.|.|.+.+. |.+.|++++..+.. .++....++ .|.|.++..+|.
T Consensus 8 ~~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
T 2edh_A 8 RTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDA 85 (113)
T ss_dssp CCCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTC
T ss_pred cEEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhC
Confidence 44556677644 477777788899999999999999765 68999999988764 344444333 799999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEecceee
Q psy573 183 GEYVCEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|.|+|.+ +.....+.|.|.++|...
T Consensus 86 G~Y~C~a----~~~~~~~~l~V~~~p~~~ 110 (113)
T 2edh_A 86 GEYLCMC----GKERTSAMLTVRAMPSGP 110 (113)
T ss_dssp EEEEEEE----TTEEEEEEEEECCCCCSS
T ss_pred EEEEEEe----CCCCEEEEEEEeCCCCCc
Confidence 9999999 777888899999877543
No 306
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=3.8e-15 Score=93.11 Aligned_cols=96 Identities=19% Similarity=0.269 Sum_probs=72.0
Q ss_pred EEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee-------cCCeEEEecCCCCCCe
Q psy573 112 VLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL-------PSRSLQLSDVRLEDGG 183 (216)
Q Consensus 112 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~-------~~~~l~i~~~~~~d~g 183 (216)
.|.|..+|.+..... . ...+...|.|.+.|.|.|.+.|++++..+.... .... ..+.|.|.++..+|+|
T Consensus 2 ~L~V~~pP~i~~~~~-~--~~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 78 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEE-P--ELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNG 78 (118)
T ss_dssp --CCCCCCCCCCCCC-C--CCCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred EEEEecCCceeccCC-C--eeccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCE
Confidence 355666676543322 1 123667899999999999999999998886543 2221 2457999999999999
Q ss_pred EEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 184 EYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 184 ~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.|+|.+.|..|....++.|.|...|..
T Consensus 79 ~Y~C~a~N~~G~~~~~~~l~v~~~P~~ 105 (118)
T 1wwc_A 79 NYTLIAKNPLGTANQTINGHFLKEPFP 105 (118)
T ss_dssp EEEEEEEETTEEEEEEEEECCSCCCCC
T ss_pred EEEEEEECCCCeEeeEEEEEEccCCCc
Confidence 999999999999999999888877643
No 307
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.5e-15 Score=94.54 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=79.0
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe--cCcEEEEcccCCCC
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV--DGTNLAIQDSRKTD 91 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d 91 (216)
..+.|.|...++.+...+.+..+.+|+.+.|.|.+ .+.|.+.+.||+++..+........... ....|.|.+++.+|
T Consensus 3 s~a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D 81 (115)
T 2cr6_A 3 SGSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRI-SPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKD 81 (115)
T ss_dssp CCCCCCCCSSCCEEEECCCEEEEETTSCEECCCEE-ESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTT
T ss_pred ccEEEEEcCCCCeEeccCccEEEeCCCcEEEEEEE-cCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhh
Confidence 45678887776788888889999999999999998 6788889999999988854332222111 12479999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEeecceEEeC
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRG 124 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~ 124 (216)
+|.|+|.+. . ....+.|.|..+|.+...
T Consensus 82 ~G~Y~C~~g----~-~~~~~~L~V~~~p~~~~~ 109 (115)
T 2cr6_A 82 SGTIYFEAG----D-QRASAALRVTEKPSVFSR 109 (115)
T ss_dssp CEEEEEEET----T-EECCEEEEEECCSSCCSS
T ss_pred CEEEEEEEC----C-eeEEEEEEEECCCceecc
Confidence 999999942 2 244578888887765443
No 308
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=8.8e-15 Score=91.40 Aligned_cols=93 Identities=24% Similarity=0.428 Sum_probs=70.7
Q ss_pred ccceEe---cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEE
Q psy573 24 REEFRV---QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 24 ~~~~~~---~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~ 99 (216)
+|.+.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. .....+.... ...|.|.++..+|+|.|+|.+
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~-~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPF-QGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEE-EEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEE-ccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 566654 2456889999999999998 788999999999999884 2222222222 235999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecc
Q psy573 100 KNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p 119 (216)
.|..+.. ...+.|.|...|
T Consensus 99 ~N~~G~~-~~~~~l~V~~~P 117 (118)
T 2e7c_A 99 QIENMKD-TATIRIRVVEKA 117 (118)
T ss_dssp ECSSCEE-CCEEEEEEECCC
T ss_pred EeCCCeE-EEEEEEEEEcCC
Confidence 9988854 556777776654
No 309
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.59 E-value=6.1e-15 Score=91.41 Aligned_cols=97 Identities=26% Similarity=0.414 Sum_probs=75.2
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc---EEEEcccCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT---NLAIQDSRK 89 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~ 89 (216)
+..+.|.|...+|.+...+....+.+|+.+.|.|.+ .+. +.+.||+++..+.. ..++....++ .|.|.++..
T Consensus 8 ~~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~-~~~--p~v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~ 82 (113)
T 2edh_A 8 RTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCEL-SKM--APVEWWKGHETLRD--GDRHSLRQDGARCELQIRGLVA 82 (113)
T ss_dssp CCCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEE-SSC--CCCEEEESSSBCCC--SSSEEEEEETTEEEEEECSCCS
T ss_pred cEEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEE-CCC--CcEEEEECCEECCC--CCcEEEEECCCEEEEEECCCCh
Confidence 556788888777889888889999999999999998 443 68999999987743 3344444333 799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeecc
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
+|+|.|+|.+ +. ....+.|.|..+|
T Consensus 83 ~D~G~Y~C~a----~~-~~~~~~l~V~~~p 107 (113)
T 2edh_A 83 EDAGEYLCMC----GK-ERTSAMLTVRAMP 107 (113)
T ss_dssp TTCEEEEEEE----TT-EEEEEEEEECCCC
T ss_pred hhCEEEEEEe----CC-CCEEEEEEEeCCC
Confidence 9999999999 22 2445677777665
No 310
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=86.13 Aligned_cols=83 Identities=27% Similarity=0.446 Sum_probs=67.8
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAG 104 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 104 (216)
+.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ...|.|.+++.+|+|.|.|.+.|..+
T Consensus 4 ~~i~~~p~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~a~n~~g 74 (91)
T 3bfo_A 4 LQICVEPTSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHET--------KKLYMVPYVDLEHQGTYWCHVYNDRD 74 (91)
T ss_dssp CEEEECCCCEEECTTSCEEEECEE-ECSSCCEEEEEETTEECTTCC--------SSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred eEEEECCCccEecCCCcEEEEEEe-ccCCCCEEEEEcCCeeCCcCC--------CCeEEECCCCHHhCEEEEEEEEcCCC
Confidence 556677778889999999999998 788889999999998874322 35799999999999999999999888
Q ss_pred CcccceeEEEEe
Q psy573 105 TRESTDAVLRVL 116 (216)
Q Consensus 105 ~~~~~~~~l~v~ 116 (216)
...+..+.|.|.
T Consensus 75 ~~~s~~~~l~V~ 86 (91)
T 3bfo_A 75 SQDSKKVEIIID 86 (91)
T ss_dssp EEECCCEEEEEC
T ss_pred CEEeeeEEEEEe
Confidence 654555666553
No 311
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.58 E-value=1.5e-14 Score=84.39 Aligned_cols=80 Identities=23% Similarity=0.308 Sum_probs=58.8
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEcCCCCcccc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKNVAGTREST 109 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 109 (216)
...+.+.+|+.+.|.|.+ .+ |.+.+.|||+|..+...........+ ...|.|.++..+|+|.|.|.+.+. ..
T Consensus 3 lt~v~~~~G~~v~l~C~v-s~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~-----~~ 75 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHL-SG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD-----SR 75 (84)
T ss_dssp CCCEEECTTSCEEEECCC-SC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT-----CE
T ss_pred CeEEEEecCCCEEEEEEE-CC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE-----EE
Confidence 346789999999999998 44 88899999999998543332222222 237999999999999999997542 33
Q ss_pred eeEEEEee
Q psy573 110 DAVLRVLV 117 (216)
Q Consensus 110 ~~~l~v~~ 117 (216)
.+.|.|..
T Consensus 76 ~a~l~V~e 83 (84)
T 2lu7_A 76 IFLVSVEE 83 (84)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 45666643
No 312
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.58 E-value=2.9e-15 Score=89.57 Aligned_cols=88 Identities=23% Similarity=0.329 Sum_probs=67.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EEeccccCceEEEe-cCcEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HPIDFENSKRLRLV-DGTNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~ 100 (216)
+|.|...+....+.+|+.+.|.|.+ .+.|.+.+.|++++ ..+... ...... ....|.|.++..+|+|.|+|.+.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~-~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDF-IGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEE-ECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEE-EEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 4666666778899999999999998 78899999999999 766332 222222 23579999999999999999999
Q ss_pred cCCCCcccceeEEEE
Q psy573 101 NVAGTRESTDAVLRV 115 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v 115 (216)
|..|.. ...+.|.|
T Consensus 79 N~~G~~-~~~~~l~V 92 (93)
T 1wit_A 79 NELGED-EAIFEVIV 92 (93)
T ss_dssp ETTEEE-EEEEEEEE
T ss_pred cCCCeE-EEEEEEEE
Confidence 988754 44455544
No 313
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=87.20 Aligned_cols=89 Identities=28% Similarity=0.520 Sum_probs=69.9
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec---CcEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~ 100 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .++.... ...|.|.++..+|+|.|.|.+.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKA-TGEPRPTAIWTKDGKAITQG--GKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEE-EEESCCEEEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEE-EecCCCEEEEEECCEECcCC--CCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 5778888888999999999999998 77788999999999987443 3333332 2279999999999999999999
Q ss_pred cCCCCcccceeEEEEe
Q psy573 101 NVAGTRESTDAVLRVL 116 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~ 116 (216)
|..+.. ...+.|.|.
T Consensus 83 n~~g~~-~~~~~l~V~ 97 (99)
T 3puc_A 83 NSAGSV-SSSCKLTIK 97 (99)
T ss_dssp ETTEEE-EEEEEEEEE
T ss_pred eCCCcE-eEEEEEEEE
Confidence 987764 444555543
No 314
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.58 E-value=2e-14 Score=103.15 Aligned_cols=174 Identities=15% Similarity=0.166 Sum_probs=105.1
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGT 105 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 105 (216)
+.+.|+...+.+|+.+.|+|.+ . .+.+ .+.|.-.-........+ .....|.+.++..+ |.|.|.+.... .
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~-~-c~~p~~~~~~t~l~~~~~~~~g----~~~~~~~l~~v~~~--~~y~C~~~~~~-~ 72 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCST-S-CDQPKLLGIETPLPKKELLLPG----NNRKVYELSNVQED--SQPMCYSNCPD-G 72 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEE-C-CSSCSEEEEECSSCCCCCCCSC----SSEEEEEEESCCSC--CCCEEEEECSS-C
T ss_pred eEEeCCccEEcCCCeEEEEEeC-C-CCCCccceEEecCCCcccccCC----CceEEEEEEecccC--CeEEEEEEcCC-c
Confidence 3456777889999999999998 3 3344 47885421111000000 00124777887743 46999997433 3
Q ss_pred cccceeEEEEeecceE-EeCCCceeEeCCCcEEEEEEeCCC-CCc--EEEEeeCCccCCCCCeee-ecCCeEEEecCCCC
Q psy573 106 RESTDAVLRVLVKPYI-IRGPKDTTVSAGSIIVFECSVGGD-AVL--TVHWKRLGSAMPEDRMSV-LPSRSLQLSDVRLE 180 (216)
Q Consensus 106 ~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~i~W~~~~~~~~~~~~~~-~~~~~l~i~~~~~~ 180 (216)
.....+.+.|..+|.. .+.+....+.+|+.++|.|.+.+. |.. +|.|+|++..+....... ....++.+...+.+
T Consensus 73 ~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D 152 (291)
T 1mq8_A 73 QSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDH 152 (291)
T ss_dssp EEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSC
T ss_pred cEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeecc
Confidence 4456678888887743 333333458889999999999765 433 699999997654221000 01234666666666
Q ss_pred CCeEEEEEEEcCCcc--------eEEEEEEEEEecce
Q psy573 181 DGGEYVCEAENAVGK--------ISASATLTVQSKYL 209 (216)
Q Consensus 181 d~g~y~C~~~n~~~~--------~~~~~~l~v~~~p~ 209 (216)
+++.|+|.|.|..+. .+....|.|..+|.
T Consensus 153 ~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~ 189 (291)
T 1mq8_A 153 HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA 189 (291)
T ss_dssp SSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----
T ss_pred CCceEEEEEEecCCccCCccccccccceEEEEEecCC
Confidence 677999999987552 34445666766653
No 315
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.58 E-value=1.4e-14 Score=91.08 Aligned_cols=87 Identities=20% Similarity=0.321 Sum_probs=67.9
Q ss_pred CceeEeCCCcEEEEEEeCCC--CCcEEEEeeCCccCC------CCCeee------ecCCeEEEecCCCCCCeEEEEEEEc
Q psy573 126 KDTTVSAGSIIVFECSVGGD--AVLTVHWKRLGSAMP------EDRMSV------LPSRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~~~~------~~~~~~------~~~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
....+.+|+.+.|.|.+.+. |.+.+.|++++..+. ...... ...+.|.|.+++.+|+|.|+|.+.|
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 95 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 95 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEcc
Confidence 44578899999999999874 457899999887432 111111 1235799999999999999999999
Q ss_pred CCcceEEEEEEEEEecceeee
Q psy573 192 AVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~~p~~~~ 212 (216)
..|.....+.|.|.++|.+.+
T Consensus 96 ~~g~~~~~~~l~V~~~p~i~~ 116 (122)
T 3s35_X 96 GLMTKKNSTFVRVHEKPFVAF 116 (122)
T ss_dssp SSCEEEEEEEEEEEEEECC--
T ss_pred CCCceEEEEEEEEeccCeEEe
Confidence 999999999999999887654
No 316
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=7.5e-15 Score=89.56 Aligned_cols=95 Identities=15% Similarity=0.206 Sum_probs=70.2
Q ss_pred eEEeeccceEecccceEEecCCcEEEEeeCCCCCCC-CeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEE
Q psy573 19 KIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPE-PTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQ 96 (216)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~-~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~ 96 (216)
+|...++.|...+.+..+.+|+.++|.|.+ .+.+. +.+.||+++..+.......+.... ...|.|.+++.+|+|.|+
T Consensus 3 ~V~~~p~~~~~~~~~~~v~~G~~v~l~C~v-~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 81 (104)
T 2eny_A 3 SGSSGHVGITKRLKTMEVLEGESCSFECVL-SHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVV 81 (104)
T ss_dssp CCCCCCCCCSBCCCCEEEESSCCEEEEEEC-SSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEE
T ss_pred ccccCCCEEEecCCCcEEcCCCcEEEEEEE-cCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEE
Confidence 455566778888889999999999999998 55553 479999999887543333332222 237999999999999999
Q ss_pred EEEEcCCCCcccceeEEEEeecc
Q psy573 97 CVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 97 C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
|.+.+. .....|.|..+|
T Consensus 82 C~a~~~-----~~~a~L~V~~~p 99 (104)
T 2eny_A 82 FSVRGL-----TSKASLIVRERS 99 (104)
T ss_dssp EEETTE-----EEEECEEEECCC
T ss_pred EEECCe-----eEEEEEEEeCCC
Confidence 988542 345677777665
No 317
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=8.9e-15 Score=91.38 Aligned_cols=91 Identities=21% Similarity=0.269 Sum_probs=67.3
Q ss_pred cceEecccceEEecCCcEEEEeeCCCC---CCCCeeEEeeCCEE-eccccCceEEEe---------cCcEEEEcccCCCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRG---HPEPTLVWKKNGHP-IDFENSKRLRLV---------DGTNLAIQDSRKTD 91 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~---~~~~~~~W~~~~~~-~~~~~~~~~~~~---------~~~~l~i~~~~~~d 91 (216)
+.|...|.++.+.+|+.++|.|.+ .+ .|.|.|.|||++.. +......++.+. ....|.|.++...|
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v-~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKV-KAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEE-ECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEE-eccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 457778889999999999999987 44 38899999997421 110111222221 13679999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEee
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
+|.|+|++.+..+.. ...+.|.|..
T Consensus 87 aG~Y~Cevsn~~g~~-~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFD-SCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEE-EECCEEEEEC
T ss_pred CEEEEEEEEeCCCcE-EEEEEEEEEe
Confidence 999999999987653 6678888887
No 318
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.57 E-value=2.8e-14 Score=87.53 Aligned_cols=92 Identities=22% Similarity=0.362 Sum_probs=70.7
Q ss_pred eecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCcc-C--------CCCCeeee----cCCeEEEecCCCCCC
Q psy573 116 LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSA-M--------PEDRMSVL----PSRSLQLSDVRLEDG 182 (216)
Q Consensus 116 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~-~--------~~~~~~~~----~~~~l~i~~~~~~d~ 182 (216)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++.. + ...+.... ....|.|.+++.+|+
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 3445555667788999999999999999999999999987641 1 12233322 245799999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 183 GEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
|.|+|.+.| .+.....+.|.|.++|
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred eEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 999999999 8888889999998765
No 319
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.57 E-value=7.2e-14 Score=84.25 Aligned_cols=80 Identities=28% Similarity=0.469 Sum_probs=66.2
Q ss_pred CCceeEeCCCcEEEEEEeC-CCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy573 125 PKDTTVSAGSIIVFECSVG-GDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLT 203 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~ 203 (216)
+....+.+|+.+.|.|.+. +.|.+.+.|++++....... .....+.|.|.+++.+|+|.|.|.+.|..|.....+.|.
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR-AMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT-EEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce-eecCCCEEEEeCCChhhCEEEEEEecCCCCccccEEEEE
Confidence 4556888999999999997 68899999999865443333 233467899999999999999999999999988888887
Q ss_pred EE
Q psy573 204 VQ 205 (216)
Q Consensus 204 v~ 205 (216)
|.
T Consensus 96 V~ 97 (98)
T 1gl4_B 96 VQ 97 (98)
T ss_dssp EC
T ss_pred Ee
Confidence 75
No 320
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.57 E-value=5.1e-14 Score=94.76 Aligned_cols=161 Identities=16% Similarity=0.194 Sum_probs=103.5
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
..+.+.|+...+.+|+.+.|+|.+ .. +.+ .+.|...-...... .......+.|.+++ +|.+.|.|.+....
T Consensus 3 f~v~v~P~~~~V~~G~Sv~l~Cs~-~c-~~p~~~~~~t~l~~~~~~-----~g~~~~~~~ls~vs-~d~~~~~C~~~c~~ 74 (196)
T 3bn3_B 3 FWADLQPRVAFVERGGSLWLNCST-NC-PRPERGGLETSLRRNGTQ-----RGLRWLARQLVDIR-EPETQPVCFFRCAR 74 (196)
T ss_dssp SCEEEESSEEEEETTEEEEEEEEE-CC-SSCSEEEEECSSEEEEEE-----EETTEEEEEEEEEC-SSEECCEEEEEETT
T ss_pred cEEEEcCCCcEEcCCCeEEEEEeC-CC-CCCCccEEEEccCCeeEc-----cccCceEEEEEEEc-cCCCceEEEEECCC
Confidence 355667777889999999999998 33 333 67775421111000 00111248889998 78787999977543
Q ss_pred CCcccceeEEEEeecceE-EeCCCceeEeCCCcEEEEEEeCCC-CCc--EEEEeeCCccCCCCCeee-e-----cCCeEE
Q psy573 104 GTRESTDAVLRVLVKPYI-IRGPKDTTVSAGSIIVFECSVGGD-AVL--TVHWKRLGSAMPEDRMSV-L-----PSRSLQ 173 (216)
Q Consensus 104 ~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~i~W~~~~~~~~~~~~~~-~-----~~~~l~ 173 (216)
......+.|.|..+|.. .+.+....+.+|+.++|.|.+.+. |.. +|.|++++..+....... . ...++.
T Consensus 75 -~~~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~ 153 (196)
T 3bn3_B 75 -RTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTAT 153 (196)
T ss_dssp -EEEEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEE
T ss_pred -CceEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEE
Confidence 44466788888887743 333443458899999999999765 543 489999987663211000 0 113455
Q ss_pred EecCCCCCCeEEEEEEEcCCc
Q psy573 174 LSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 174 i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+.....++...|+|.|.+..+
T Consensus 154 ~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 154 VLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp EECCGGGTTCEEEEEEEEECG
T ss_pred EeeeeccCCCeEEEEEEccCC
Confidence 554454455599999998776
No 321
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.57 E-value=1.5e-14 Score=87.61 Aligned_cols=79 Identities=29% Similarity=0.543 Sum_probs=65.2
Q ss_pred CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC----eee-ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 126 KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR----MSV-LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~----~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ... .....|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 34578899999999999999999999999998765321 122 2345899999999999999999999999988888
Q ss_pred EEEE
Q psy573 201 TLTV 204 (216)
Q Consensus 201 ~l~v 204 (216)
.|.|
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 322
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.57 E-value=4.3e-14 Score=84.27 Aligned_cols=84 Identities=20% Similarity=0.267 Sum_probs=66.0
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC-CCeeeecC---CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE-DRMSVLPS---RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
++.+...+.+..+.+|+.+.|.|.+.+ +.+.+.|+|++..+.. .+..+... ..|.|.++..+|+|.|+|.+.|.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~- 82 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT- 82 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE-
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC-
Confidence 456677778889999999999999975 4578999999998864 34444322 37999999999999999999774
Q ss_pred cceEEEEEEEEEe
Q psy573 194 GKISASATLTVQS 206 (216)
Q Consensus 194 ~~~~~~~~l~v~~ 206 (216)
..+..|.|.+
T Consensus 83 ---~~sa~L~V~~ 92 (93)
T 1waa_A 83 ---KSAANLKVKE 92 (93)
T ss_dssp ---EEEEEEEEEC
T ss_pred ---cEEEEEEEEc
Confidence 3566666654
No 323
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=3.7e-15 Score=92.10 Aligned_cols=88 Identities=22% Similarity=0.271 Sum_probs=69.0
Q ss_pred eEEeCCCceeEeCCCcEEEEEEeCCC---CCcEEEEeeCCcc-CC---CCCeeee---------cCCeEEEecCCCCCCe
Q psy573 120 YIIRGPKDTTVSAGSIIVFECSVGGD---AVLTVHWKRLGSA-MP---EDRMSVL---------PSRSLQLSDVRLEDGG 183 (216)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~i~W~~~~~~-~~---~~~~~~~---------~~~~l~i~~~~~~d~g 183 (216)
.+...|....+.+|+.+.|.|.+.+. |.|.|.|+|+... +. ..+.... ....|.|.++...|+|
T Consensus 14 ~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 93 (118)
T 2edn_A 14 VFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRG 93 (118)
T ss_dssp SCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCS
T ss_pred eEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCE
Confidence 34455778899999999999999765 7899999997421 11 1122221 1367999999999999
Q ss_pred EEEEEEEcCCcceEEEEEEEEEec
Q psy573 184 EYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 184 ~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
.|+|.+.|..|..+..++|.|.++
T Consensus 94 ~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 94 YYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CEEEEEECSSCEEEEEECCEEECC
T ss_pred EEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999874
No 324
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.57 E-value=1.2e-14 Score=90.72 Aligned_cols=100 Identities=29% Similarity=0.518 Sum_probs=75.0
Q ss_pred eeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecccc---CceEEEecCcEEEEc-----ccCC
Q psy573 18 LKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFEN---SKRLRLVDGTNLAIQ-----DSRK 89 (216)
Q Consensus 18 l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~---~~~~~~~~~~~l~i~-----~~~~ 89 (216)
|.+...+|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ........++.+.+. +++.
T Consensus 3 l~~~~~pP~i~~~p~~~~v~~G~~v~L~C~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~ 81 (117)
T 2v9t_A 3 LRQEDFPPRIVEHPSDLIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSR 81 (117)
T ss_dssp CCCCCEEEEEEECCCCEEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBC
T ss_pred cccccCCCeeEcCCCCEEEcCCCcEEEEEEC-CccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCc
Confidence 3444557888888989999999999999998 788999999999998875332 112333444445444 4579
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK 118 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~ 118 (216)
+|+|.|.|.+.|..|...+..+.+.+...
T Consensus 82 ~D~G~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 82 PDEGVYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp SSCEEEEEEEEETTEEEECCCEEEEEC--
T ss_pred CcCEEEEEEEEeCccceEeeeEEEEhhhh
Confidence 99999999999999887777777776654
No 325
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.57 E-value=2.2e-14 Score=88.11 Aligned_cols=91 Identities=21% Similarity=0.261 Sum_probs=66.5
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCC---CeeEEeeCCEEecc-ccCceEEEe---------cCcEEEEcccCCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPE---PTLVWKKNGHPIDF-ENSKRLRLV---------DGTNLAIQDSRKT 90 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~---~~~~W~~~~~~~~~-~~~~~~~~~---------~~~~l~i~~~~~~ 90 (216)
.|.|...|..+.+.+|+.++|.|.+ .+.|. +.+.||+++..... ....++... ....|.|.+++.+
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~-~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARV-AGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEE-ECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEE-CCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4677778888999999999999998 67777 89999998732211 111222221 1357999999999
Q ss_pred CCceEEEEEEcCCCCcccceeEEEEe
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRVL 116 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v~ 116 (216)
|+|.|+|.+.|..|.. ...+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~-~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFD-CSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEE-EEEEEEEEE
T ss_pred cCEEEEEEEecCCCce-EEEEEEEEe
Confidence 9999999999988765 445666553
No 326
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.56 E-value=1.1e-14 Score=87.44 Aligned_cols=87 Identities=28% Similarity=0.444 Sum_probs=67.2
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
.+|.+...+....+.+|+.+.|.|.+ .+.| +.+.|++++..+.. ..++... ++.|.|.+++.+|+|.|.|.+.|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~g~p-p~i~W~k~g~~~~~--~~~~~~~-~~~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRL-RDDV-QSINWLRDGVQLVE--SNRTRIT-GEEVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCE-ESSC-CEEEEEBTTBCCCC--CSSEEEC-SSEEEESSCCGGGSEEEEEEEEET
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEEC-CCCC-CceEEEECCEecCC--CCCEEEe-CCEEEECCCChHHCEEEEEEeccC
Confidence 35667677788899999999999998 5666 79999999987743 3344333 678999999999999999999997
Q ss_pred CCCcccceeEEEE
Q psy573 103 AGTRESTDAVLRV 115 (216)
Q Consensus 103 ~~~~~~~~~~l~v 115 (216)
.|.. ...+.|.|
T Consensus 83 ~g~~-~~~~~l~V 94 (95)
T 2ckn_A 83 SGSD-TTYFSVNV 94 (95)
T ss_dssp TEEE-EEEEEEEE
T ss_pred CCcE-EEEEEEEE
Confidence 7653 33444443
No 327
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.55 E-value=4.6e-15 Score=90.87 Aligned_cols=89 Identities=26% Similarity=0.560 Sum_probs=70.8
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec---CcEEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~ 100 (216)
+|.+...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ..++.... +..|.|.+++.+|+|.|+|.+.
T Consensus 14 ~~~i~~~p~~~~v~~G~~v~L~C~~-~g~p~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 14 AARILTKPRSMTVYEGESARFSCDT-DGEPVPTVTWLRKGQVLST--SARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp CCEEEECCCCEEESSSSCEECCEEE-ECSSCCBCCBCSSSSCCTT--CSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCEEEECCCCEEEeCCCcEEEEEEE-EEcCCCEEEEEECCEECCC--CCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 5678888889999999999999998 7888899999999987743 23333332 3589999999999999999999
Q ss_pred cCCCCcccceeEEEEe
Q psy573 101 NVAGTRESTDAVLRVL 116 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~ 116 (216)
|..|.. ...+.|.|.
T Consensus 91 N~~G~~-~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQ-EAEFTLTIQ 105 (106)
T ss_dssp CSSCBC-CEEEEEEEC
T ss_pred eCCCeE-EEEEEEEEE
Confidence 988764 445566553
No 328
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=4.8e-15 Score=91.57 Aligned_cols=94 Identities=22% Similarity=0.282 Sum_probs=68.2
Q ss_pred eeccceEecccceEEecCCcEEEEeeCCCC---CCCCeeEEeeCCEE-eccccCceEEEe---c------CcEEEEcccC
Q psy573 22 MLREEFRVQPKSQRVAAGDTALLECGPPRG---HPEPTLVWKKNGHP-IDFENSKRLRLV---D------GTNLAIQDSR 88 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~---~~~~~~~W~~~~~~-~~~~~~~~~~~~---~------~~~l~i~~~~ 88 (216)
...+.|...|.++.+.+|+.++|.|.+ .+ .|.|.|.|||++.. +......++.+. . +..|.|.++.
T Consensus 10 ~~~~~f~~~P~~v~V~eG~~v~L~C~v-~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 88 (118)
T 2edn_A 10 EPTGVFLKKPDSVSVETGKDAVVVAKV-NGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVV 88 (118)
T ss_dssp CCSSSCSBCCCCCEEETTSCEECCEEE-ETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCC
T ss_pred CCcceEEECCCCeEEeCCCCEEEEEEE-eccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCC
Confidence 344667778889999999999999998 44 37899999997421 111111122221 1 3679999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEee
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
..|+|.|+|++.+..+. .+..+.|.|..
T Consensus 89 ~~D~G~Y~Cevsn~~g~-~s~~~~L~V~~ 116 (118)
T 2edn_A 89 LGDRGYYRLEVKAKDTC-DSCGFNIDVEA 116 (118)
T ss_dssp TTTCSCEEEEEECSSCE-EEEEECCEEEC
T ss_pred hhhCEEEEEEEEEcCCc-EEEEEEEEEEc
Confidence 99999999999998885 36667777765
No 329
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.55 E-value=3.7e-14 Score=88.42 Aligned_cols=92 Identities=33% Similarity=0.507 Sum_probs=69.3
Q ss_pred eecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC------CeeeecCCeEEEe-----cCCCCCCeE
Q psy573 116 LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED------RMSVLPSRSLQLS-----DVRLEDGGE 184 (216)
Q Consensus 116 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~------~~~~~~~~~l~i~-----~~~~~d~g~ 184 (216)
..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+... ......++.+.+. ++..+|.|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 45677777788889999999999999999999999999999876533 1223334444444 457899999
Q ss_pred EEEEEEcCCcce-EEEEEEEEEec
Q psy573 185 YVCEAENAVGKI-SASATLTVQSK 207 (216)
Q Consensus 185 y~C~~~n~~~~~-~~~~~l~v~~~ 207 (216)
|.|.+.|..|.. ...+.|.+...
T Consensus 87 Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 87 YVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEEEETTEEEECCCEEEEEC--
T ss_pred EEEEEEeCccceEeeeEEEEhhhh
Confidence 999999999984 44566666544
No 330
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.55 E-value=2.3e-14 Score=106.54 Aligned_cols=107 Identities=14% Similarity=0.193 Sum_probs=66.4
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecc--ccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDF--ENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRE 107 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 107 (216)
.+..+.+.+|+.+.|.|.+ .+ |.+.+.|++++..+.. ....++.. .++.|.|.+++.+|+|.|+|.+.|..|..
T Consensus 252 ~~~~v~v~~G~~~~l~C~~-~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~- 327 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDT-KQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNE- 327 (361)
T ss_dssp CCCCCEEETTCCEEECCCC-SS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEE-
T ss_pred cccCceecCCCeEEEEeEe-eC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCcc-
Confidence 4456789999999999998 66 8899999997765422 22234555 67789999999999999999999987654
Q ss_pred cceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEE
Q psy573 108 STDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVH 151 (216)
Q Consensus 108 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~ 151 (216)
...+.+.|...+ ..|+.+.|.|.+.|.|.|.|.
T Consensus 328 ~~~~~l~V~~~~-----------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 328 TLSVELKVYNFT-----------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEEEESSC-----------CC-------------------
T ss_pred EEEEEEEEEeee-----------ccCCceEEEEEeCCCCCCccc
Confidence 445666664322 567889999999999988763
No 331
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.55 E-value=2.6e-14 Score=83.40 Aligned_cols=77 Identities=21% Similarity=0.390 Sum_probs=60.2
Q ss_pred CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy573 126 KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAVGKISASAT 201 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~ 201 (216)
....+.+|+.+.|.|.+.+ |.|.+.|+|++..+... +...... ..|.|.++..+|+|.|+|.|.| .+.++.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~ 78 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFL 78 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEE
Confidence 4567889999999999965 88899999999988654 3333322 3699999999999999998744 466677
Q ss_pred EEEEec
Q psy573 202 LTVQSK 207 (216)
Q Consensus 202 l~v~~~ 207 (216)
|.|.+|
T Consensus 79 l~V~eP 84 (84)
T 2lu7_A 79 VSVEEP 84 (84)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 777653
No 332
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=4e-14 Score=86.21 Aligned_cols=88 Identities=24% Similarity=0.309 Sum_probs=66.6
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEEEc
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+.|...+....+.+|+.+.|.|.+ .+ +.+.+.||+++..+......++....+ ..|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~~-~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 8 IMVTKQLEDTTAYCGERVELECEV-SE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp CCCSBCCCCEEEETTEEEEEEEEC-SS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred ceeeccCCCEEEECCCCEEEEEEe-cC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 346667788899999999999998 55 668999999999885443223333322 5799999999999999999976
Q ss_pred CCCCcccceeEEEEeecc
Q psy573 102 VAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p 119 (216)
......|.|..+|
T Consensus 86 -----~~~~~~l~V~~~p 98 (103)
T 1x44_A 86 -----GQSSAKLSVDLKS 98 (103)
T ss_dssp -----EEEEEEEEEECCC
T ss_pred -----CcEEEEEEEeCCC
Confidence 2445667776654
No 333
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.1e-14 Score=90.51 Aligned_cols=97 Identities=27% Similarity=0.306 Sum_probs=75.7
Q ss_pred eEEEEeecc-eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee----cCCeEEEecCCCCCCeE
Q psy573 111 AVLRVLVKP-YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL----PSRSLQLSDVRLEDGGE 184 (216)
Q Consensus 111 ~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~----~~~~l~i~~~~~~d~g~ 184 (216)
..|.|..+| .+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... .... ....|.|.++..+|+|.
T Consensus 5 a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 84 (115)
T 2cr6_A 5 SSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGT 84 (115)
T ss_dssp CCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEE
T ss_pred EEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEE
Confidence 345555554 56677788899999999999999999999999999998775432 2221 12479999999999999
Q ss_pred EEEEEEcCCcceEEEEEEEEEecceee
Q psy573 185 YVCEAENAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 185 y~C~~~n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|+|.+ |.....+.|.|.++|.+.
T Consensus 85 Y~C~~----g~~~~~~~L~V~~~p~~~ 107 (115)
T 2cr6_A 85 IYFEA----GDQRASAALRVTEKPSVF 107 (115)
T ss_dssp EEEEE----TTEECCEEEEEECCSSCC
T ss_pred EEEEE----CCeeEEEEEEEECCCcee
Confidence 99993 667777889999887644
No 334
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.9e-14 Score=86.47 Aligned_cols=84 Identities=26% Similarity=0.563 Sum_probs=66.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
++.+...|....+.+|+.++|.|.+ .+.|.+.+.||+++..+... .+..|.|.+++.+|+|.|+|.+.|..
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~-~g~p~~~v~W~k~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~ 80 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEV-PAQPSPQIHWMKDGVPLPLP--------PSPVLILPEIGPQDQGTYSCVATHSS 80 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCC-SSCSSCCCCCEESSSBCSSC--------CCSEEEEESCCTTTCEEEECEECCSS
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEE-ccCCCCEEEEEECCEECcCC--------CCCEEEECCCCcccCEEEEEEEEeCC
Confidence 4677778888889999999999998 77888899999998876322 24689999999999999999999854
Q ss_pred CC-cccceeEEEEe
Q psy573 104 GT-RESTDAVLRVL 116 (216)
Q Consensus 104 ~~-~~~~~~~l~v~ 116 (216)
+. ..+..+.|.|.
T Consensus 81 ~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 81 HGPQESRAVSISII 94 (96)
T ss_dssp CCCEECCCEEEEEC
T ss_pred CCcEEEEEEEEEEe
Confidence 33 33444555543
No 335
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=6.2e-14 Score=85.46 Aligned_cols=89 Identities=15% Similarity=0.308 Sum_probs=67.2
Q ss_pred ccceEecccc---eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEE
Q psy573 24 REEFRVQPKS---QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 24 ~~~~~~~~~~---~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~ 99 (216)
+|.+...|.. ..+.+|+.++|.|.+ .+.+.+ +.||+++..+.......+.... ...|.|.+++.+|+|.|+|.+
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~-~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCEL-SRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEEC-SSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEe-cCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 4666667766 789999999999998 677777 9999999988544333333222 247999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecc
Q psy573 100 KNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p 119 (216)
.|.. ..+.|.|..+|
T Consensus 85 ~n~~-----~~~~l~V~~~P 99 (104)
T 2e6p_A 85 EGVS-----AFFGVTVQDPS 99 (104)
T ss_dssp SSCC-----CCEEEEEECCC
T ss_pred CCce-----EEEEEEEcCCC
Confidence 8752 24567776655
No 336
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.54 E-value=4.8e-16 Score=97.80 Aligned_cols=99 Identities=19% Similarity=0.237 Sum_probs=81.3
Q ss_pred ceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcE-EEEeeCCccCCC---CCeeee----c---CCeEEEecC
Q psy573 109 TDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLT-VHWKRLGSAMPE---DRMSVL----P---SRSLQLSDV 177 (216)
Q Consensus 109 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~~~---~~~~~~----~---~~~l~i~~~ 177 (216)
..+.|.|..+|.+.. +....+.+|+.+.|.|.+.+.|.|. +.|++++..+.. .++... . ...|.|.++
T Consensus 5 ~~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v 83 (122)
T 2cry_A 5 SSGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNI 83 (122)
T ss_dssp CCCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTC
T ss_pred eEEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCC
Confidence 346677888888877 7777899999999999999999987 999999887653 333331 1 237999999
Q ss_pred CCCCC-eEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 178 RLEDG-GEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 178 ~~~d~-g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
..+|. |.|+|.+.|..|.....+.|.|.+++
T Consensus 84 ~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 84 VRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp CHHHHHSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred ChhhCCceEEEEEECCCCeEEEEEEEEECCCC
Confidence 99998 99999999999999999988888654
No 337
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.53 E-value=1.3e-13 Score=82.90 Aligned_cols=86 Identities=22% Similarity=0.274 Sum_probs=65.6
Q ss_pred eEecccceEEecCCcEEEEeeCCCCC-CCCeeEEeeCCEEeccccCceEEE-ecCc--EEEEcccCCCCCceEEEEEEcC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGH-PEPTLVWKKNGHPIDFENSKRLRL-VDGT--NLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~-~~~~--~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
+...+.+..+.+|+.+.|.|.+ .+. |.+.+.||+++..+... .++.. ..++ .|.|.+++.+|+|.|.|.+.|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~-~g~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKI-ENYDQSTQVTWYFGVRQLENS--EKYEITYEDGVAILYVKDITKLDDGTYRCKVVND 80 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEE-ESCCTTCEEEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eeccCcCEEEcCCCcEEEEEEE-eccCCCCEEEEEECCEECcCC--CCEEEEEcCCeEEEEEecCChhhCeEEEEEEECC
Confidence 3445667889999999999998 665 88899999999987433 23332 2233 7999999999999999999998
Q ss_pred CCCcccceeEEEEe
Q psy573 103 AGTRESTDAVLRVL 116 (216)
Q Consensus 103 ~~~~~~~~~~l~v~ 116 (216)
.+.. ...+.|.|.
T Consensus 81 ~g~~-~~~~~l~V~ 93 (97)
T 2bk8_A 81 YGED-SSYAELFVK 93 (97)
T ss_dssp SCEE-EEEEEEEET
T ss_pred CCeE-eEEEEEEEE
Confidence 8765 334555554
No 338
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=5.5e-14 Score=85.56 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=68.2
Q ss_pred EEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC---eeeecC---CeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 121 IIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR---MSVLPS---RSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 121 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~---~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+.... +..... ..|.|.++..+|+|.|+|.+.|
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--- 85 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG--- 85 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT---
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC---
Confidence 455667788999999999999977 778999999998875442 233322 5799999999999999999977
Q ss_pred ceEEEEEEEEEecceee
Q psy573 195 KISASATLTVQSKYLKV 211 (216)
Q Consensus 195 ~~~~~~~l~v~~~p~~~ 211 (216)
....+.|.|..+|...
T Consensus 86 -~~~~~~l~V~~~p~p~ 101 (103)
T 1x44_A 86 -GQSSAKLSVDLKSGPS 101 (103)
T ss_dssp -EEEEEEEEEECCCSCC
T ss_pred -CcEEEEEEEeCCCCCC
Confidence 5677888888877543
No 339
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=4.1e-14 Score=86.13 Aligned_cols=89 Identities=28% Similarity=0.447 Sum_probs=71.0
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+... +...... ..|.|.++..+|+|.|+|.+.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-- 84 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA-- 84 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--
Confidence 456666777889999999999999987 77889999999887543 3333322 3699999999999999999988
Q ss_pred cceEEEEEEEEEecceee
Q psy573 194 GKISASATLTVQSKYLKV 211 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~~~ 211 (216)
....+.|.|..+|..+
T Consensus 85 --~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 85 --SKSTASLHVEEKASGP 100 (103)
T ss_dssp --CEEEEEEEECCCSSSS
T ss_pred --CCcEEEEEEeCCCCCC
Confidence 4677888888877543
No 340
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.52 E-value=3.5e-14 Score=96.04 Aligned_cols=102 Identities=28% Similarity=0.525 Sum_probs=80.4
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..+.|.|... |.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ...+.....++.|.|.++..+|+|
T Consensus 91 ~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~G 166 (192)
T 2iep_A 91 SCGALQVKMK-PKITRPPINVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSALR--ENSRIAVLESGSLRIHNVQKEDAG 166 (192)
T ss_dssp EEEEEEEEEE-EEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEECC--CCSSEEECTTSCEEESSCCGGGCE
T ss_pred eEEEEEEEeC-CccccCCcceEEeCCCcEEEEEEE-eccCCceEEEEeCCEEcc--CCCcEEEecCCcEEEecCChhhCE
Confidence 3456666554 667777778889999999999998 777888999999999874 334455666778999999999999
Q ss_pred eEEEEEEcCCCCcccceeEEEEeecc
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
.|+|.+.|..+...+..+.|.|..+|
T Consensus 167 ~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 167 QYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999887665666777777654
No 341
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.52 E-value=5.2e-14 Score=99.54 Aligned_cols=115 Identities=19% Similarity=0.269 Sum_probs=62.8
Q ss_pred cCCCCCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCC-----CcEEEEeeCC--ccC
Q psy573 87 SRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDA-----VLTVHWKRLG--SAM 159 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~~--~~~ 159 (216)
++.+|+|.|.|.+. +.. .....+.+..++.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++++ ..+
T Consensus 11 v~~~dsg~Y~C~a~---g~~-~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYS-FTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc---hhh-hhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 68899999999998 222 122334444466676667788999999999999998887 4889999853 211
Q ss_pred -------------CCCCeeeec---CCeEEEecCCCCCCeEEEEEEEcCCcce-EEEEEEEEE
Q psy573 160 -------------PEDRMSVLP---SRSLQLSDVRLEDGGEYVCEAENAVGKI-SASATLTVQ 205 (216)
Q Consensus 160 -------------~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~~~~-~~~~~l~v~ 205 (216)
...++.... ...|.|.+++.+|+|.|.|.+.|..+.. .....|.|.
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 012333321 2379999999999999999999886542 222345555
No 342
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.52 E-value=6.5e-14 Score=83.01 Aligned_cols=65 Identities=18% Similarity=0.446 Sum_probs=50.8
Q ss_pred EEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC-cEEEEcccCCCCCceEEEEEEc
Q psy573 35 RVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG-TNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 35 ~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.+.+|+.+.|.|.+ .+ |.+.+.|||+|..+...........++ ..|.|.++..+|+|.|+|.+.|
T Consensus 17 ~~~~g~~v~l~C~v-~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 17 HAITSECVMLACEV-DR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp ECCTTCCEEEEEEC-SC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred EEECCCcEEEEEEE-CC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 45689999999998 44 778999999999885544333333322 3799999999999999999865
No 343
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=8.5e-15 Score=88.88 Aligned_cols=91 Identities=26% Similarity=0.315 Sum_probs=67.4
Q ss_pred EeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCc--eEEEec-C--cEEEEcccCCCCCceE
Q psy573 21 EMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSK--RLRLVD-G--TNLAIQDSRKTDDGRY 95 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~--~~~~~~-~--~~l~i~~~~~~d~g~y 95 (216)
...++.|...+....+.+|+.+.|.|.+ .+.+ +.+.||+++..+...... ++.... + ..|.|.++..+|+|.|
T Consensus 5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~~-~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 5 SSGPVLIVTPLEDQQVFVGDRVEMAVEV-SEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCCCCCEEECCCCEEEESSCCCBCCEEE-SCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBE
T ss_pred ccCCCEEEecCCceEEcCCCCEEEEEEE-eCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEE
Confidence 3456778888888999999999999998 6666 899999999887543321 223322 2 3699999999999999
Q ss_pred EEEEEcCCCCcccceeEEEEeec
Q psy573 96 QCVVKNVAGTRESTDAVLRVLVK 118 (216)
Q Consensus 96 ~C~~~~~~~~~~~~~~~l~v~~~ 118 (216)
+|.+.+. .....|.|..+
T Consensus 83 ~C~a~n~-----~~~~~l~V~~~ 100 (101)
T 2edk_A 83 QVITNGG-----QCEAELIVEEK 100 (101)
T ss_dssp EEECSSC-----EECCBEEEECC
T ss_pred EEEEcCC-----cEEEEEEEeCC
Confidence 9998762 23345666544
No 344
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.52 E-value=9.2e-14 Score=85.67 Aligned_cols=89 Identities=27% Similarity=0.477 Sum_probs=70.2
Q ss_pred eecceEEeCCCceeEeCCCcEEEEEEeCCC--CCcEEEEeeCCccCCCCCe----eee-c-------CCeEEEecCCCCC
Q psy573 116 LVKPYIIRGPKDTTVSAGSIIVFECSVGGD--AVLTVHWKRLGSAMPEDRM----SVL-P-------SRSLQLSDVRLED 181 (216)
Q Consensus 116 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~~~~~~~~----~~~-~-------~~~l~i~~~~~~d 181 (216)
..+|.+...+....+..|+.+.|.|.+.+. +.+.+.|++++..+..... ... . ...|.|.++..+|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 456777777888899999999999999744 4689999999988765431 111 1 3579999999999
Q ss_pred CeEEEEEEEcCCcc-eEEEEEEEE
Q psy573 182 GGEYVCEAENAVGK-ISASATLTV 204 (216)
Q Consensus 182 ~g~y~C~~~n~~~~-~~~~~~l~v 204 (216)
.|.|+|.+.|..|. .+..+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999988 456666665
No 345
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.52 E-value=8e-14 Score=85.50 Aligned_cols=93 Identities=24% Similarity=0.450 Sum_probs=67.9
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE-Eecc-----ccCceEEEe----cCcEEEEcccCCCCCc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH-PIDF-----ENSKRLRLV----DGTNLAIQDSRKTDDG 93 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~-~~~~-----~~~~~~~~~----~~~~l~i~~~~~~d~g 93 (216)
+|.+...+.+..+.+|+.++|.|.+ .+.+.+.+.|++++. .+.. ....++... .+.+|.|.+++.+|+|
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRV-DQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEE-SSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred CCCccccCCeeEEEeCCcEEEEeEE-cCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 4667778889999999999999998 677788999999775 2211 112244332 3457999999999999
Q ss_pred eEEEEEEcCCCCcccceeEEEEeecc
Q psy573 94 RYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 94 ~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
.|+|.+.+ .+.. .....|.|..+|
T Consensus 85 ~Y~C~~~n-~~~~-~~~~~L~V~~~P 108 (108)
T 3m45_A 85 QYTCSLFT-MPVK-TSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEECS-SSCE-EEEEEEEEECCC
T ss_pred EEEEEEEc-CCCc-EEEEEEEEEcCC
Confidence 99999998 5443 556677776554
No 346
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=4.6e-14 Score=85.92 Aligned_cols=88 Identities=24% Similarity=0.335 Sum_probs=68.1
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.+...+....+.+|+.+.|.|.+ .+ +.+.+.||+++..+.... ++....+ ..|.|.++..+|+|.|+|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~-~~~~v~W~k~g~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCEL-SR-AGTPVHWLKDRKAIRKSQ--KYDVVCEGTMAMLVIRGASLKDAGEYTCEV 82 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEE-SS-SSCCCCEEESSCBCCCSS--SEEEEEETTEEEEEESSCCTTTCSEEEEEC
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEE-eC-CCCcEEEEECCEEccCCC--CEEEEECCCEEEEEECCCCcccCEEEEEEE
Confidence 46777778888999999999999998 44 777899999998874333 3333322 36999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecc
Q psy573 100 KNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p 119 (216)
.| ....+.|.|..+|
T Consensus 83 ~n-----~~~~~~l~V~~~p 97 (103)
T 2edf_A 83 EA-----SKSTASLHVEEKA 97 (103)
T ss_dssp SS-----CEEEEEEEECCCS
T ss_pred cc-----CCcEEEEEEeCCC
Confidence 87 2445677776655
No 347
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.51 E-value=5e-14 Score=85.23 Aligned_cols=90 Identities=27% Similarity=0.413 Sum_probs=66.4
Q ss_pred ccceEecc----cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCc--eEEEecCcEEEEcccCCCCCceEEE
Q psy573 24 REEFRVQP----KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSK--RLRLVDGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 24 ~~~~~~~~----~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~g~y~C 97 (216)
+|.|...+ ....+.+|+.+.|.|.+ .+.|.+.+.|++++..+...... ......+..|.|.+++.+|+|.|+|
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 82 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 82 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEc-cccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEE
Confidence 45555433 35778899999999998 77888999999999987543221 1222334589999999999999999
Q ss_pred EEEcCCCCcccceeEEEE
Q psy573 98 VVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v 115 (216)
.+.|..|.. ...+.|.|
T Consensus 83 ~a~N~~g~~-~~~~~l~V 99 (100)
T 3caf_A 83 VVENEYGSI-NHTYHLDV 99 (100)
T ss_dssp EEEETTEEE-EEEEEEEE
T ss_pred EEEeCCCEE-EEEEEEEE
Confidence 999987764 34445544
No 348
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.51 E-value=6.5e-14 Score=85.70 Aligned_cols=89 Identities=26% Similarity=0.283 Sum_probs=66.2
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEc
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
.+|.|...+.+..+.+|+.+.|.|.+ .+.+.+ +.||+++..+.......+.... ...|.|.++..+|+|.|+|.+.|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~-~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEV-SDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEE-SCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEE-cCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 35778888889999999999999998 566666 9999999887543332222222 14799999999999999999998
Q ss_pred CCCCcccceeEEEEe
Q psy573 102 VAGTRESTDAVLRVL 116 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~ 116 (216)
... .....|.|.
T Consensus 85 ~~~---~~~~~l~V~ 96 (106)
T 2dlt_A 85 YAL---SLSAKLNFL 96 (106)
T ss_dssp SCC---CCCBCEEEE
T ss_pred CCc---eEEEEEEEE
Confidence 722 234455554
No 349
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.51 E-value=3e-13 Score=91.81 Aligned_cols=95 Identities=23% Similarity=0.325 Sum_probs=78.6
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC--Ceeee--cCC--eEEEecCCCCCCeEEEEEEE
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED--RMSVL--PSR--SLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~~~~~--~~~--~l~i~~~~~~d~g~y~C~~~ 190 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +.... ..+ .|.|.++..+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 3567777778889999999999999999999999999999887543 22222 233 79999999999999999999
Q ss_pred cCCcceEEEEEEEEEecceee
Q psy573 191 NAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 191 n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|..|.....+.|.|..+|.+.
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~ 103 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIH 103 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEEC
T ss_pred ECCCceeEEEEEEEcCCCcCC
Confidence 999998888999998776653
No 350
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=2.9e-14 Score=85.64 Aligned_cols=82 Identities=23% Similarity=0.500 Sum_probs=65.6
Q ss_pred ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcc--e
Q psy573 119 PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGK--I 196 (216)
Q Consensus 119 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~--~ 196 (216)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.|..+. .
T Consensus 11 ~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~ 85 (96)
T 2ens_A 11 VQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-----PSPVLILPEIGPQDQGTYSCVATHSSHGPQE 85 (96)
T ss_dssp CCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-----CCSEEEEESCCTTTCEEEECEECCSSCCCEE
T ss_pred CEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-----CCCEEEECCCCcccCEEEEEEEEeCCCCcEE
Confidence 44555566778999999999999999999999999998876543 3578999999999999999999997654 3
Q ss_pred EEEEEEEEE
Q psy573 197 SASATLTVQ 205 (216)
Q Consensus 197 ~~~~~l~v~ 205 (216)
+..+.|.|.
T Consensus 86 s~~~~v~V~ 94 (96)
T 2ens_A 86 SRAVSISII 94 (96)
T ss_dssp CCCEEEEEC
T ss_pred EEEEEEEEe
Confidence 444555554
No 351
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.50 E-value=5.9e-13 Score=91.58 Aligned_cols=92 Identities=30% Similarity=0.531 Sum_probs=77.7
Q ss_pred eecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeee-----cCCeEEEecC-CCCCCeEEEEEE
Q psy573 116 LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVL-----PSRSLQLSDV-RLEDGGEYVCEA 189 (216)
Q Consensus 116 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~-----~~~~l~i~~~-~~~d~g~y~C~~ 189 (216)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...+.... ....|.|.++ ..+|+|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 4567788888888999999999999999999999999999998876554332 2346999999 499999999999
Q ss_pred EcCCcceEEEEEEEEEec
Q psy573 190 ENAVGKISASATLTVQSK 207 (216)
Q Consensus 190 ~n~~~~~~~~~~l~v~~~ 207 (216)
.|..|.....+.|.|...
T Consensus 84 ~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp EETTEEEEEEEEEEEECG
T ss_pred EcCCCcEEEEEEEEEecc
Confidence 999999888888888765
No 352
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=1.9e-13 Score=84.53 Aligned_cols=94 Identities=21% Similarity=0.324 Sum_probs=68.3
Q ss_pred cceEecccc---eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEE
Q psy573 25 EEFRVQPKS---QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 25 ~~~~~~~~~---~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~ 100 (216)
|.+...|.. ..+.+|+.+.|.|.+ . .|.+.+.||+++..+.......+.... ...|.|.+++.+|+|.|.|.+.
T Consensus 11 p~~~~~p~~~~~~~~~~G~~v~L~C~~-~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 88 (113)
T 2cpc_A 11 SSWIVYPSGKVYVAAVRLERVVLTCEL-C-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEID 88 (113)
T ss_dssp SCSEEESCSCEEEEEETTCCEEEEEEE-S-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESS
T ss_pred CcEEEccCCceeEEEEcCCeEEEEEEe-c-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEe
Confidence 444455544 678899999999998 3 678899999999988543332222211 1579999999999999999998
Q ss_pred cCCCCcccceeEEEEeecceEEeCC
Q psy573 101 NVAGTRESTDAVLRVLVKPYIIRGP 125 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~~~p~~~~~~ 125 (216)
| ....+.|.|..+|.....+
T Consensus 89 n-----~~~~~~l~V~~~p~~~~~p 108 (113)
T 2cpc_A 89 D-----ESASFTVTVTEPPVRIIYS 108 (113)
T ss_dssp S-----CEEEEEEEEECCCCCCCCC
T ss_pred c-----CcEEEEEEEecCCchhccC
Confidence 7 2456778888777554433
No 353
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.50 E-value=1.1e-13 Score=95.48 Aligned_cols=102 Identities=53% Similarity=0.966 Sum_probs=80.5
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccc------cCceEEEecCcEEEEcc
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFE------NSKRLRLVDGTNLAIQD 86 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~------~~~~~~~~~~~~l~i~~ 86 (216)
+..+.|.|...++.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+... ...+.....++.|.|.+
T Consensus 97 ~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 176 (217)
T 2vr9_A 97 SRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISN 176 (217)
T ss_dssp CCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESS
T ss_pred cccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEee
Confidence 446677777777788888888889999999999987567788999999999988521 23445556677899999
Q ss_pred cCCCCCceEEEEEEcCCCCcccceeEEE
Q psy573 87 SRKTDDGRYQCVVKNVAGTRESTDAVLR 114 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~ 114 (216)
++.+|+|.|+|.+.|..|........+.
T Consensus 177 ~~~~d~G~Y~C~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 177 VEPIDEGNYKCIAQNLVGTRESSYAKLI 204 (217)
T ss_dssp CCSTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCHHHCeEEEEEEEcccceeccccEEEE
Confidence 9999999999999998876544434443
No 354
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.50 E-value=3.1e-13 Score=81.71 Aligned_cols=87 Identities=22% Similarity=0.303 Sum_probs=68.8
Q ss_pred cceEEeCCCc-eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcC
Q psy573 118 KPYIIRGPKD-TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 118 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
+|.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++..+... +...... ..|.|.++..+|+|.|+|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a--- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA--- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE---
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE---
Confidence 4556555555 5788999999999998 788999999999887543 3333322 36999999999999999999
Q ss_pred CcceEEEEEEEEEecce
Q psy573 193 VGKISASATLTVQSKYL 209 (216)
Q Consensus 193 ~~~~~~~~~l~v~~~p~ 209 (216)
|....++.|.|.++|.
T Consensus 83 -g~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 83 -GDEKCSTELFVRSGPS 98 (100)
T ss_dssp -TTEEEEEEEEECCSCC
T ss_pred -CCceEEEEEEEecCCC
Confidence 6777888899988773
No 355
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.50 E-value=1.6e-13 Score=83.43 Aligned_cols=88 Identities=26% Similarity=0.437 Sum_probs=66.5
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc---EEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT---NLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.+...+....+.+|+.+.|.|.+ .+.+.+ +.||+++..+.. ..++....++ .|.|.+++.+|+|.|+|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~-v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 82 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVL-SSVAAP-VKWCYGNNVLRP--GDKYSLRQEGAMLELVVRNLRPQDSGRYSCSF 82 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEEC-SSCCCS-CEEEESSSBCCC--SSSEEEEECSSEEEEEECSCCTTTCCCEEEEC
T ss_pred CCCEEEecCccEEEECCCcEEEEEEE-eCCCCC-eEEEECCEECCC--CCcEEEEEcCCEEEEEEccCCcccCEEEEEEE
Confidence 35677777888999999999999998 677777 999999887743 3344444333 5999999999999999982
Q ss_pred EcCCCCcccceeEEEEeecc
Q psy573 100 KNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p 119 (216)
+. ....+.|.|..+|
T Consensus 83 ----g~-~~~~~~l~V~~~p 97 (103)
T 2e7b_A 83 ----GD-QTTSATLTVTALP 97 (103)
T ss_dssp ----SS-CBCCBCEEEECCC
T ss_pred ----CC-cEEEEEEEEEecc
Confidence 22 2345667777655
No 356
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.50 E-value=3.7e-13 Score=82.66 Aligned_cols=90 Identities=21% Similarity=0.173 Sum_probs=65.0
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEe----------------c-cccCceEEEecCcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPI----------------D-FENSKRLRLVDGTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~----------------~-~~~~~~~~~~~~~~l~i~~~~~ 89 (216)
+.+++.+..+.+|+++.|.|.. ...+...+.||++.... . ....+|..+..+++|.|.+++.
T Consensus 3 l~i~~~p~~~~~G~~v~L~~~~-~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~ 81 (111)
T 2qsq_A 3 LTIESTPFNVAEGKEVLLLVHN-LPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQ 81 (111)
T ss_dssp CEEEEESSEEETTSCEEEEEES-CCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCG
T ss_pred cEEEeccceeccCCCEEEEEeC-CCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcc
Confidence 3444555678999999999975 22234579999975311 0 1246788888899999999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEee
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
+|+|.|+|.+.+..+......+.|.|..
T Consensus 82 ~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 82 NDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp GGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred cCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999999987654334556666653
No 357
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=1e-13 Score=88.73 Aligned_cols=82 Identities=28% Similarity=0.531 Sum_probs=62.4
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC----------------------------EEeccccCceEEEe--cC-
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG----------------------------HPIDFENSKRLRLV--DG- 79 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~----------------------------~~~~~~~~~~~~~~--~~- 79 (216)
|..+.+.+|+.+.|.|.+ .+.|.|.+.|++++ ..+. ....++... ..
T Consensus 25 p~~~~v~~G~~v~L~C~~-~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~r~~i~~~~~~ 102 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPI-SGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC-ETEGRVRVETTKDR 102 (139)
T ss_dssp CCEEEESSSSCCCCEEEC-CSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC-SCSSSCEEEEETTE
T ss_pred CCCEEEeCCCeEEEEEEE-EEcCCCeEEEEECCcccccccccccccccccccccccccccceeec-CCCCeEEEEeCCCE
Confidence 567899999999999998 88999999999998 3331 122233222 22
Q ss_pred cEEEEcccCCCCCceEEEEEEcCCCCcccceeEEEE
Q psy573 80 TNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 80 ~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v 115 (216)
..|.|.++..+|+|.|+|.+.|..|.. ...+.|.|
T Consensus 103 s~L~I~~v~~~DsG~Y~C~A~N~~G~~-~~~~~L~V 137 (139)
T 1gxe_A 103 SIFTVEGAEKEDEGVYTVTVKNPVGED-QVNLTVKV 137 (139)
T ss_dssp EEEECSCCCTTTCEEEEEEEECSSCEE-EEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEEeCCceE-EEEEEEEE
Confidence 469999999999999999999998864 44555554
No 358
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.50 E-value=1.8e-13 Score=86.11 Aligned_cols=84 Identities=17% Similarity=0.311 Sum_probs=66.4
Q ss_pred CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC---------CCCCeeee----cCCeEEEecCCCCCCeEEEEEEEc
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM---------PEDRMSVL----PSRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~---------~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
+....+.+|+++.|.|.+.+.|.+.+.|++.+..+ ...+.... ...+|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 87 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYS 87 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEES
T ss_pred CccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEc
Confidence 34567889999999999999999999999765532 22233222 136799999999999999999999
Q ss_pred CCcceEEEEEEEEEecce
Q psy573 192 AVGKISASATLTVQSKYL 209 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~~p~ 209 (216)
. |.....+.|.|..+|.
T Consensus 88 ~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 88 D-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp S-SEEEEEEEEEEECC--
T ss_pred C-CCCcEEEEEEEEeCCC
Confidence 9 9899999999998775
No 359
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.49 E-value=3.5e-13 Score=81.51 Aligned_cols=89 Identities=22% Similarity=0.272 Sum_probs=65.5
Q ss_pred ccceEecccc-eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKS-QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~-~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.|...+.+ ..+.+|+.+.|.|.+ . .|.+.+.||+++..+.......+.... ...|.|.++..+|+|.|.|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~-~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVEL-A-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEE-S-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEe-c-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 5677777766 678899999999998 4 688899999999887443322222222 136999999999999999999
Q ss_pred CCCCcccceeEEEEeecc
Q psy573 102 VAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p 119 (216)
+. ......|.|..+|
T Consensus 83 --g~-~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GD-EKCSTELFVRSGP 97 (100)
T ss_dssp --TT-EEEEEEEEECCSC
T ss_pred --CC-ceEEEEEEEecCC
Confidence 22 2445677777655
No 360
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.49 E-value=1.2e-13 Score=84.11 Aligned_cols=88 Identities=26% Similarity=0.379 Sum_probs=70.1
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC-CCeeeecCC---eEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE-DRMSVLPSR---SLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~~---~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+.. .+......+ .|.|.++..+|+|.|+|. .
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~ 82 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----F 82 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----C
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----E
Confidence 4555556677899999999999999999888 999999988753 344444444 499999999999999998 5
Q ss_pred cceEEEEEEEEEeccee
Q psy573 194 GKISASATLTVQSKYLK 210 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~~ 210 (216)
|.....+.|.|.++|..
T Consensus 83 g~~~~~~~l~V~~~p~~ 99 (103)
T 2e7b_A 83 GDQTTSATLTVTALPSG 99 (103)
T ss_dssp SSCBCCBCEEEECCCCC
T ss_pred CCcEEEEEEEEEecccc
Confidence 66677788888887753
No 361
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.49 E-value=6.7e-13 Score=85.03 Aligned_cols=82 Identities=18% Similarity=0.331 Sum_probs=65.6
Q ss_pred EeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-----------Ceeee------cCCeEEEecC
Q psy573 115 VLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-----------RMSVL------PSRSLQLSDV 177 (216)
Q Consensus 115 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-----------~~~~~------~~~~l~i~~~ 177 (216)
...+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... +.... ..+.|.|.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 346788888888899999999999999999999999999987765322 11111 2357999999
Q ss_pred CCCCCeEEEEEEEcCCcce
Q psy573 178 RLEDGGEYVCEAENAVGKI 196 (216)
Q Consensus 178 ~~~d~g~y~C~~~n~~~~~ 196 (216)
..+|+|.|+|.+.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999998874
No 362
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.49 E-value=9.2e-14 Score=93.80 Aligned_cols=92 Identities=24% Similarity=0.398 Sum_probs=72.5
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|... |.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....++.|.|.++..+|+
T Consensus 86 ~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 163 (189)
T 2v44_A 86 EATVVLEIYQK-LTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDE 163 (189)
T ss_dssp EEEEEEEEECC-CEEESCCCSEEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGC
T ss_pred EEEEEEEEecC-CceeecCCcEEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccC
Confidence 44556666543 566666777889999999999998 6888899999999988755455667777778999999999999
Q ss_pred ceEEEEEEcCCCCc
Q psy573 93 GRYQCVVKNVAGTR 106 (216)
Q Consensus 93 g~y~C~~~~~~~~~ 106 (216)
|.|+|.+.|..+..
T Consensus 164 G~Y~C~a~n~~~~~ 177 (189)
T 2v44_A 164 GIYRCEGRVEARGE 177 (189)
T ss_dssp EEEEEEEEETTTTE
T ss_pred eEEEEEEEccccCc
Confidence 99999999987543
No 363
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.49 E-value=1.6e-13 Score=86.34 Aligned_cols=90 Identities=17% Similarity=0.309 Sum_probs=65.1
Q ss_pred EecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecc------ccCceEEEe----cCcEEEEcccCCCCCceEEE
Q psy573 28 RVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDF------ENSKRLRLV----DGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~------~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C 97 (216)
...+..+.+.+|++++|.|.+ .+.|.+.+.|++.+..+.. ....++... ...+|.|.+++.+|+|.|+|
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 83 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVT-SLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKC 83 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEEC-CCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCccEEEcCCCCEEEEeEE-eccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEE
Confidence 344566789999999999998 6778899999986553211 122333332 13589999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeecce
Q psy573 98 VVKNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~p~ 120 (216)
.+.+. +. ....+.|.|..+|.
T Consensus 84 ~a~n~-g~-~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 84 LHYSD-SV-STKEVKVIVLATMK 104 (124)
T ss_dssp EEESS-SE-EEEEEEEEEECC--
T ss_pred EEEcC-CC-CcEEEEEEEEeCCC
Confidence 99988 44 35567888887764
No 364
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.49 E-value=1.6e-13 Score=88.80 Aligned_cols=87 Identities=28% Similarity=0.437 Sum_probs=69.6
Q ss_pred eCCCceeEeCCCcEEEEEEeCCCCCcEEEEe---------eCCccCCCCCeeeec----CCeEEEecCCCCCCeEEEEEE
Q psy573 123 RGPKDTTVSAGSIIVFECSVGGDAVLTVHWK---------RLGSAMPEDRMSVLP----SRSLQLSDVRLEDGGEYVCEA 189 (216)
Q Consensus 123 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~---------~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~ 189 (216)
..+....+..|+++.|.|.+.+.+.+.+.|+ +++..+...+..... ..+|.|.+++.+|+|.|+|.+
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 122 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSI 122 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEEE
Confidence 4456778999999999999998888899999 444444444443322 357999999999999999999
Q ss_pred EcCCcceEEEEEEEEEeccee
Q psy573 190 ENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 190 ~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.|. +.....+.|.|.++|..
T Consensus 123 ~n~-~~~~~~~~L~V~~~P~~ 142 (145)
T 1z9m_A 123 FTM-PVRTAKSLVTVLGIPQK 142 (145)
T ss_dssp CSS-SCEEEEEEEEEECCCC-
T ss_pred EcC-CCceEEEEEEEEeCCCC
Confidence 999 88889999999987754
No 365
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.49 E-value=4.7e-13 Score=90.75 Aligned_cols=96 Identities=25% Similarity=0.414 Sum_probs=79.6
Q ss_pred eecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecCC---eEEEecCCCCCCeEEEEEEEc
Q psy573 116 LVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPSR---SLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 116 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~---~l~i~~~~~~d~g~y~C~~~n 191 (216)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +....... .|.|.++..+|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 45677777788889999999999999988899999999999877543 33333333 799999999999999999999
Q ss_pred CCcceEEEEEEEEEecceee
Q psy573 192 AVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~~p~~~ 211 (216)
..+.....+.|.|...|.+.
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~ 104 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFH 104 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEcCCCCC
Confidence 99998888889888777554
No 366
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.49 E-value=2.2e-13 Score=83.99 Aligned_cols=93 Identities=23% Similarity=0.410 Sum_probs=67.7
Q ss_pred eccceEecccceEEecCCcEEEEeeCCC-CCCCCeeEEeeCCEEeccccCceEEEe---------cCcEEEEcccCCCCC
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPR-GHPEPTLVWKKNGHPIDFENSKRLRLV---------DGTNLAIQDSRKTDD 92 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~---------~~~~l~i~~~~~~d~ 92 (216)
.+|.+...|....+.+|+.++|.|.+.. ..+.+.+.|++++..+........... ..+.|.|.+++.+|+
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccC
Confidence 3577888888899999999999999821 244679999999987743211111111 125799999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEE
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v 115 (216)
|.|+|.+.|..|...+..+.|.|
T Consensus 89 G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 89 GXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999987764445555554
No 367
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=3.2e-13 Score=82.10 Aligned_cols=87 Identities=23% Similarity=0.363 Sum_probs=66.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCc---EEEEcccCCCCCceEEEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGT---NLAIQDSRKTDDGRYQCVVK 100 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~y~C~~~ 100 (216)
+|.|...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+... .++....++ .|.|.+++.+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-- 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT--EHPAATVTWRKGLLELRAS--GKHQPSQEGLTLRLTISALEKADSDTYTCD-- 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC--SSCCSCCEEEESSCBCCSS--SSEEEEEETTEEEEEEESCCTTTCSEEEEE--
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe--CCCCCeEEEEeCCEECCCC--CeEEEEeCCCEEEEEECCCCcccCEEEEEE--
Confidence 5677777888999999999999995 6778899999999877433 344444333 799999999999999998
Q ss_pred cCCCCcccceeEEEEeecc
Q psy573 101 NVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 101 ~~~~~~~~~~~~l~v~~~p 119 (216)
.+.. ...+.|.|...|
T Consensus 82 --~g~~-~~~~~l~V~~~p 97 (103)
T 2dku_A 82 --IGQA-QSRAQLLVQGRR 97 (103)
T ss_dssp --CSSC-BCCEEEEEECSC
T ss_pred --eCCc-eEEEEEEEeCcc
Confidence 2322 345677776655
No 368
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.4e-13 Score=83.84 Aligned_cols=88 Identities=20% Similarity=0.288 Sum_probs=68.9
Q ss_pred ceEEeCCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 119 PYIIRGPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 119 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+... ++..... ..|.|.++..+|+|.|+|.+.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~--- 85 (104)
T 2eny_A 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR--- 85 (104)
T ss_dssp CCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET---
T ss_pred CEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC---
Confidence 34556667789999999999999988774 479999999887543 3333322 369999999999999999884
Q ss_pred cceEEEEEEEEEeccee
Q psy573 194 GKISASATLTVQSKYLK 210 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~~ 210 (216)
+...+..|.|.++|..
T Consensus 86 -~~~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 86 -GLTSKASLIVRERSGP 101 (104)
T ss_dssp -TEEEEECEEEECCCSS
T ss_pred -CeeEEEEEEEeCCCcC
Confidence 4567888999988754
No 369
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.2e-12 Score=80.20 Aligned_cols=88 Identities=22% Similarity=0.294 Sum_probs=70.1
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-----------eeeecCC---eEEEecCCCCCCe
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-----------MSVLPSR---SLQLSDVRLEDGG 183 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-----------~~~~~~~---~l~i~~~~~~d~g 183 (216)
++.+...+.+..+.+|+.+.|.|.+.+ .+.+.|++|+..+.... +....++ .|.|.++..+|+|
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G 85 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSG 85 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCS
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCc
Confidence 456778888999999999999999987 77899999999987553 3333333 6999999999999
Q ss_pred EEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 184 EYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 184 ~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.|+|..-+ ....++.|.|.++|..
T Consensus 86 ~Y~~~~~~---~~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 86 ALVGFSCP---GVQDSAALTIQESSGP 109 (112)
T ss_dssp EEEEEEET---TEEEEEEEEEECSSCS
T ss_pred cEEEEEEC---CeeEEEEEEEeCCCcc
Confidence 99875543 3456889999988753
No 370
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.48 E-value=1e-13 Score=87.06 Aligned_cols=97 Identities=19% Similarity=0.368 Sum_probs=66.8
Q ss_pred eEecccc-eEEecCCcEEEEeeCCCC--CCCCeeEEeeCCEEecc----ccCceEEE-----ecCcEEEEcccCCCCCce
Q psy573 27 FRVQPKS-QRVAAGDTALLECGPPRG--HPEPTLVWKKNGHPIDF----ENSKRLRL-----VDGTNLAIQDSRKTDDGR 94 (216)
Q Consensus 27 ~~~~~~~-~~~~~G~~~~l~C~~~~~--~~~~~~~W~~~~~~~~~----~~~~~~~~-----~~~~~l~i~~~~~~d~g~ 94 (216)
+.+.|.. +.+.+|+.+.|.|.+ .+ .+.+.+.|++++..+.. ........ ...+.|.|.+++.+|+|.
T Consensus 10 v~i~p~~~v~v~~G~~v~L~C~~-~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 88 (122)
T 3s35_X 10 VVLSPSHGIELSVGEKLVLNCTA-RTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGL 88 (122)
T ss_dssp EEEESCSCEEEEETCCEEEEEEE-EECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEE
T ss_pred EEEcCCCCEEEecCCeEEEEEEE-EcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEE
Confidence 4444444 588999999999998 55 45578999998774321 11111111 123579999999999999
Q ss_pred EEEEEEcCCCCcccceeEEEEeecceEEeCC
Q psy573 95 YQCVVKNVAGTRESTDAVLRVLVKPYIIRGP 125 (216)
Q Consensus 95 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~ 125 (216)
|+|.+.|..+.. ...+.|.|..+|.+...+
T Consensus 89 Y~C~a~n~~g~~-~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 89 YTCAASSGLMTK-KNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEEEECC----
T ss_pred EEEEEccCCCce-EEEEEEEEeccCeEEeec
Confidence 999999988765 457788888888765544
No 371
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=9.9e-14 Score=84.57 Aligned_cols=88 Identities=24% Similarity=0.400 Sum_probs=66.9
Q ss_pred ceEEeCCCc---eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeeec---CCeEEEecCCCCCCeEEEEEEEc
Q psy573 119 PYIIRGPKD---TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLP---SRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 119 p~~~~~~~~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
|.+...+.. ..+.+|+.+.|.|.+.+.|.+ +.|++++..+... +..... ...|.|.++..+|+|.|+|.+.|
T Consensus 8 P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 86 (104)
T 2e6p_A 8 PVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEG 86 (104)
T ss_dssp SCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSS
T ss_pred CCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECC
Confidence 444444555 688999999999999999888 9999999887543 333321 24699999999999999999988
Q ss_pred CCcceEEEEEEEEEecceee
Q psy573 192 AVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 192 ~~~~~~~~~~l~v~~~p~~~ 211 (216)
..+ .+.|.|.++|..+
T Consensus 87 ~~~----~~~l~V~~~P~pp 102 (104)
T 2e6p_A 87 VSA----FFGVTVQDPSGPS 102 (104)
T ss_dssp CCC----CEEEEEECCCCSS
T ss_pred ceE----EEEEEEcCCCCCc
Confidence 743 5667788777543
No 372
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=4e-14 Score=85.87 Aligned_cols=86 Identities=24% Similarity=0.337 Sum_probs=67.0
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-----CeeeecC---CeEEEecCCCCCCeEEEEEE
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-----RMSVLPS---RSLQLSDVRLEDGGEYVCEA 189 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-----~~~~~~~---~~l~i~~~~~~d~g~y~C~~ 189 (216)
+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+... ++..... ..|.|.++..+|+|.|+|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 45666677778999999999999999888 999999999887543 2233322 35999999999999999999
Q ss_pred EcCCcceEEEEEEEEEecc
Q psy573 190 ENAVGKISASATLTVQSKY 208 (216)
Q Consensus 190 ~n~~~~~~~~~~l~v~~~p 208 (216)
.| ......|.|.++|
T Consensus 87 ~n----~~~~~~l~V~~~P 101 (101)
T 2edk_A 87 NG----GQCEAELIVEEKQ 101 (101)
T ss_dssp SS----CEECCBEEEECCC
T ss_pred cC----CcEEEEEEEeCCC
Confidence 86 3455667777654
No 373
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=1.4e-13 Score=84.19 Aligned_cols=85 Identities=28% Similarity=0.458 Sum_probs=66.2
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+... +...... ..|.|.++..+|.|.|+|.+.|.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~- 85 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY- 85 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS-
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC-
Confidence 4566777788899999999999999988877 9999999887543 3333322 37999999999999999999998
Q ss_pred cceEEEEEEEEE
Q psy573 194 GKISASATLTVQ 205 (216)
Q Consensus 194 ~~~~~~~~l~v~ 205 (216)
....++.|.|.
T Consensus 86 -~~~~~~~l~V~ 96 (106)
T 2dlt_A 86 -ALSLSAKLNFL 96 (106)
T ss_dssp -CCCCCBCEEEE
T ss_pred -CceEEEEEEEE
Confidence 33344445554
No 374
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.47 E-value=1.4e-13 Score=92.96 Aligned_cols=89 Identities=26% Similarity=0.521 Sum_probs=73.3
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDG 93 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 93 (216)
..+.|.|.. +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....++.|.|.++..+|+|
T Consensus 91 ~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 168 (191)
T 1epf_A 91 ATVNVKIFQ-KLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEG 168 (191)
T ss_dssp EEEEEEEEC-CSEEEECCSSEECCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCE
T ss_pred EEEEEEeec-CceEecCCCcEeecCCCeEEEEEEE-CCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCE
Confidence 344455443 4677777888889999999999998 68889999999999988665666677777778999999999999
Q ss_pred eEEEEEEcCCC
Q psy573 94 RYQCVVKNVAG 104 (216)
Q Consensus 94 ~y~C~~~~~~~ 104 (216)
.|+|.+.|..+
T Consensus 169 ~Y~C~a~n~~~ 179 (191)
T 1epf_A 169 TYRCEGRILAR 179 (191)
T ss_dssp EEEEEEEEGGG
T ss_pred EEEEEEEEecc
Confidence 99999998664
No 375
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.47 E-value=8.9e-13 Score=89.23 Aligned_cols=90 Identities=24% Similarity=0.400 Sum_probs=74.2
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC---eeee---cCCeEEEecCCCCCCeEEEEEEE
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR---MSVL---PSRSLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~---~~~~---~~~~l~i~~~~~~d~g~y~C~~~ 190 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .... ....|.|.++..+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 45677777788899999999999999988999999999998775432 2221 22479999999999999999999
Q ss_pred cCCcceEEEEEEEEEe
Q psy573 191 NAVGKISASATLTVQS 206 (216)
Q Consensus 191 n~~~~~~~~~~l~v~~ 206 (216)
|..|.......|.|..
T Consensus 84 n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 84 NGSGQATSTAELLVKA 99 (194)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred cCCceEeEEEEEEEcc
Confidence 9999888888888873
No 376
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.47 E-value=7.5e-13 Score=79.23 Aligned_cols=83 Identities=24% Similarity=0.446 Sum_probs=63.3
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTREST 109 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 109 (216)
.|....+.+|+.+.|.|.+ .+ .+.+.|++++..+... .++... ++.|.|.+++.+|+|.|.|.+.|..+.. ..
T Consensus 7 ~p~~~~v~~G~~~~l~C~~-~~--~p~v~W~k~g~~~~~~--~~~~~~-~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~ 79 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCML-KD--AAVISWTKDGVHLGPN--NRTVLI-GEYLQIKGATPRDSGLYACTAARTVDSE-TW 79 (95)
T ss_dssp -CEEEEECTTSCEEEECCC-CT--TCEEEEEETTEEECCC--SSEEEE-TTEEEECSCCGGGCEEEEEEEECSSCEE-EE
T ss_pred CCCcEEECCCCEEEEEEEe-CC--CCEEEEEECCEECCCC--ceEEEe-CCEEEECcCCcccCEEEEEEEccCCCcE-EE
Confidence 4566789999999999987 44 4799999999988432 334333 5689999999999999999999987754 44
Q ss_pred eeEEEEeecc
Q psy573 110 DAVLRVLVKP 119 (216)
Q Consensus 110 ~~~l~v~~~p 119 (216)
.+.|.|..++
T Consensus 80 ~~~l~V~~~~ 89 (95)
T 4hwu_A 80 IFMVNVTDAA 89 (95)
T ss_dssp EEEEEECCC-
T ss_pred EEEEEEeCCc
Confidence 5666665543
No 377
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=83.05 Aligned_cols=83 Identities=29% Similarity=0.477 Sum_probs=62.8
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTREST 109 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 109 (216)
.|....+.+|+.++|.|.+ .+.| +.+.|++++..+.. ..++... +..|.|.++..+|+|.|.|.+.|..+.. ..
T Consensus 9 ~p~~~~v~~G~~v~L~C~~-~g~p-p~i~W~k~g~~~~~--~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~ 82 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRL-RDDV-QSINWLRDGVQLAE--SNRTRIT-GEEVEVQDSVPADSGLYACVTSSPSGSD-TT 82 (99)
T ss_dssp CEEECCBCTTSCEEEECCC-CSSC-CEEEEEESSSBCCC--CSSEEEC-SSEEEETTCCTTTCEEEEEEEEETTEEE-EE
T ss_pred CCcCeEEeCCCcEEEEEEe-cCCC-CeEEEEECCEECCC--CCcEEEE-CCEEEEccCCHHHCEEEEEEEEeCCceE-EE
Confidence 3455678899999999998 5656 69999999987743 2334333 6789999999999999999999987654 44
Q ss_pred eeEEEEeec
Q psy573 110 DAVLRVLVK 118 (216)
Q Consensus 110 ~~~l~v~~~ 118 (216)
.+.|.|...
T Consensus 83 ~~~l~V~~~ 91 (99)
T 2cr3_A 83 YFSVNVSDA 91 (99)
T ss_dssp EEEECBCSC
T ss_pred EEEEEEecC
Confidence 455555543
No 378
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.47 E-value=1.1e-12 Score=78.53 Aligned_cols=73 Identities=25% Similarity=0.459 Sum_probs=57.8
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC-cEEEEcccCCCCCceEEEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG-TNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~ 99 (216)
+.|...+....+.+|+.+.|.|.+ +.+.+.+.||+++..+............. ..|.|.+++.+|+|.|.|.+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET--ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC--SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe--CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 556667788899999999999998 56788999999998885433333322222 47999999999999999999
No 379
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.47 E-value=2.2e-12 Score=88.70 Aligned_cols=91 Identities=37% Similarity=0.676 Sum_probs=76.2
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC--CCCeeee--cC--CeEEEecCCC-CCCeEEEEEE
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP--EDRMSVL--PS--RSLQLSDVRL-EDGGEYVCEA 189 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~--~~~~~~~--~~--~~l~i~~~~~-~d~g~y~C~~ 189 (216)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..+.... .+ ..|.|.++.. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 46777888888899999999999999999999999999998875 2333332 22 4799999999 9999999999
Q ss_pred EcCCcc-eEEEEEEEEEec
Q psy573 190 ENAVGK-ISASATLTVQSK 207 (216)
Q Consensus 190 ~n~~~~-~~~~~~l~v~~~ 207 (216)
.|..|. ....+.|.|...
T Consensus 85 ~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp ECSSSCEEEEEEEEEEECT
T ss_pred EeCCCCeEEeeEEEEEecc
Confidence 999998 788888888865
No 380
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1.1e-12 Score=80.50 Aligned_cols=89 Identities=15% Similarity=0.170 Sum_probs=68.1
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccC-c-------eEEEecCc---EEEEcccCCCCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENS-K-------RLRLVDGT---NLAIQDSRKTDD 92 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~-~-------~~~~~~~~---~l~i~~~~~~d~ 92 (216)
++.|...+.+..+.+|+.+.|.|.+ .+ .+.+.|+++|..+..... . ++.+..++ +|.|.+++.+|+
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~v-s~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDL-ST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEE-SS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEE-CC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 4678888899999999999999998 44 678999999999854321 1 66665443 799999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecc
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
|.|.|..-+. ...+..|.|..+|
T Consensus 85 G~Y~~~~~~~----~~ssA~L~V~~~p 107 (112)
T 2e6q_A 85 GALVGFSCPG----VQDSAALTIQESS 107 (112)
T ss_dssp SEEEEEEETT----EEEEEEEEEECSS
T ss_pred ccEEEEEECC----eeEEEEEEEeCCC
Confidence 9997754331 2346778887766
No 381
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=3.2e-13 Score=83.53 Aligned_cols=80 Identities=31% Similarity=0.517 Sum_probs=64.2
Q ss_pred eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy573 128 TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAVGKISASATLT 203 (216)
Q Consensus 128 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~ 203 (216)
..+..|+.+.|.|.+. .|.+.+.|++++..+... +...... ..|.|.++..+|+|.|+|.+.| ....+.|.
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~ 97 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVT 97 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEE
Confidence 4677899999999995 788899999999877543 3333322 4799999999999999999988 56678888
Q ss_pred EEecceeee
Q psy573 204 VQSKYLKVI 212 (216)
Q Consensus 204 v~~~p~~~~ 212 (216)
|.++|....
T Consensus 98 V~~~p~~~~ 106 (113)
T 2cpc_A 98 VTEPPVRII 106 (113)
T ss_dssp EECCCCCCC
T ss_pred EecCCchhc
Confidence 988885543
No 382
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.46 E-value=2.2e-13 Score=85.06 Aligned_cols=80 Identities=18% Similarity=0.311 Sum_probs=62.4
Q ss_pred cCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec--------CcEEEEcccCCCCCceEEEEEEcCCCCcccc
Q psy573 38 AGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD--------GTNLAIQDSRKTDDGRYQCVVKNVAGTREST 109 (216)
Q Consensus 38 ~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~--------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 109 (216)
.+..+.|.|.+ .+.|.|.+.|+++|..+............ .+.|.|.++...|+|.|+|.+.|..|.. ..
T Consensus 14 ~~~~~~l~c~v-~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~-~~ 91 (126)
T 1he7_A 14 EMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA-SA 91 (126)
T ss_dssp CCCEEEEEEEE-CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEE-EE
T ss_pred cCccEEEEEEE-eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeE-EE
Confidence 67889999998 89999999999999998543332222221 2579999999999999999999998875 45
Q ss_pred eeEEEEeecc
Q psy573 110 DAVLRVLVKP 119 (216)
Q Consensus 110 ~~~l~v~~~p 119 (216)
++.|.|...|
T Consensus 92 t~~l~v~~~P 101 (126)
T 1he7_A 92 SIMAAFMDNP 101 (126)
T ss_dssp EEEECCCSCT
T ss_pred EEEEEEEcCC
Confidence 5667666555
No 383
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.46 E-value=7.4e-13 Score=89.47 Aligned_cols=92 Identities=18% Similarity=0.337 Sum_probs=73.9
Q ss_pred cceEEeCCCceeEeC-CCcEEEEEEeCCCCC--cEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 118 KPYIIRGPKDTTVSA-GSIIVFECSVGGDAV--LTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~-g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+|.+... ....+.+ |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++..+|+|.|+|.+.|. +
T Consensus 3 ~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~-~ 79 (190)
T 2wv3_A 3 EPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-SNMEYRINKPRAEDSGEYHCVYHFV-S 79 (190)
T ss_dssp CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-SEEEEEESSCCGGGCEEEEEEEEET-T
T ss_pred CCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-ccEEEEEecCCcccCEEEEEEEEeC-C
Confidence 4555553 4455556 999999999988876 7899999998876554332 4577999999999999999999999 8
Q ss_pred ceEEEEEEEEEecceeee
Q psy573 195 KISASATLTVQSKYLKVI 212 (216)
Q Consensus 195 ~~~~~~~l~v~~~p~~~~ 212 (216)
.....+.|.|..+|.+..
T Consensus 80 ~~~~~~~l~V~~~p~~~~ 97 (190)
T 2wv3_A 80 APKANATIEVKAAPDITG 97 (190)
T ss_dssp EEEEEEEEEEECCCEEEE
T ss_pred cccccEEEEEecCCcccc
Confidence 888899999998886653
No 384
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.46 E-value=2.5e-13 Score=80.46 Aligned_cols=79 Identities=24% Similarity=0.393 Sum_probs=56.8
Q ss_pred eEEeCCCce--eEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-Ceeeec-C--CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 120 YIIRGPKDT--TVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLP-S--RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 120 ~~~~~~~~~--~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~-~--~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
.+..+.... .+.+|+.+.|.|.+.+ |.+.+.|+|+|..+... +..... + ..|.|.++..+|+|.|+|.|.|
T Consensus 6 ~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-- 82 (91)
T 2lvc_A 6 HIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD-- 82 (91)
T ss_dssp CCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS--
T ss_pred EEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc--
Confidence 333334443 3457999999999865 88899999999988654 333322 2 3699999999999999999855
Q ss_pred cceEEEEEEE
Q psy573 194 GKISASATLT 203 (216)
Q Consensus 194 ~~~~~~~~l~ 203 (216)
.+.++.|.
T Consensus 83 --~~~~~~lt 90 (91)
T 2lvc_A 83 --ECAYFTVT 90 (91)
T ss_dssp --CEEEEEEE
T ss_pred --eEEEEEEE
Confidence 34555554
No 385
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.46 E-value=5.1e-13 Score=81.95 Aligned_cols=88 Identities=26% Similarity=0.425 Sum_probs=67.6
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC-CCeeeecCC---eEEEecCCCCCCeEEEEEEEcC
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE-DRMSVLPSR---SLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~~---~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
.+|.+...+....+.+|+.+.|.|.+.+. +.+.|++++..+.. .++.....+ .|.|.++..+|+|.|+|.+.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-- 82 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG-- 82 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET--
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc--
Confidence 34556566677789999999999999765 68999999987754 333333333 49999999999999999994
Q ss_pred CcceEEEEEEEEEeccee
Q psy573 193 VGKISASATLTVQSKYLK 210 (216)
Q Consensus 193 ~~~~~~~~~l~v~~~p~~ 210 (216)
+....+.|.|..+|..
T Consensus 83 --n~~~~~~l~V~~~p~~ 98 (108)
T 2dm7_A 83 --QERTSATLTVRALPAR 98 (108)
T ss_dssp --TEEEEEECEEECCCSS
T ss_pred --CCEEEEEEEEecCCHH
Confidence 4577788888876643
No 386
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.46 E-value=6.8e-13 Score=91.48 Aligned_cols=94 Identities=22% Similarity=0.360 Sum_probs=76.8
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC---Ceeee---cCCeEEEecCCCCCCeEEEEEEE
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED---RMSVL---PSRSLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~---~~~~~---~~~~l~i~~~~~~d~g~y~C~~~ 190 (216)
.+|.+ ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+... +.... ....|.|.++..+|.|.|+|.+.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 34555 4566678889999999999999999999999999887654 22222 24679999999999999999999
Q ss_pred cCCcceEEEEEEEEEecceee
Q psy573 191 NAVGKISASATLTVQSKYLKV 211 (216)
Q Consensus 191 n~~~~~~~~~~l~v~~~p~~~ 211 (216)
|..|.....+.|.+..+|..+
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p 117 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSP 117 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCC
T ss_pred ECCCceEEEEEEEECCCCCCC
Confidence 999999999999988766543
No 387
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=5.5e-13 Score=81.08 Aligned_cols=89 Identities=19% Similarity=0.328 Sum_probs=70.2
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecCC---eEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPSR---SLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~---~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+... ++.....+ .|.|.++..+|+|.|+|. .
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~ 82 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----I 82 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----C
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----e
Confidence 4555566677899999999999994 7888899999999887643 44443333 799999999999999998 5
Q ss_pred cceEEEEEEEEEecceee
Q psy573 194 GKISASATLTVQSKYLKV 211 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~~~ 211 (216)
|.....+.|.|.+.|..+
T Consensus 83 g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 83 GQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp SSCBCCEEEEEECSCCCC
T ss_pred CCceEEEEEEEeCccCCC
Confidence 666677888888877543
No 388
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.45 E-value=2.9e-13 Score=81.51 Aligned_cols=87 Identities=26% Similarity=0.342 Sum_probs=62.9
Q ss_pred ccceEec-ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQ-PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~-~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
++.+.+. +....+.+|+.++|.|.+..+.|.+.+.|++++..... . . ....++.|.|.+++.+|+|.|.|.+.|.
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~--~-~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP--S-R-AMDFNGILTIRNVQPSDAGTYVCTGSNM 84 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC--T-T-EEEETTEEEECSCCGGGCEEEEEEEECS
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC--c-e-eecCCCEEEEeCCChhhCEEEEEEecCC
Confidence 3444444 45678999999999999832678899999997543311 1 1 1234568999999999999999999998
Q ss_pred CCCcccceeEEEE
Q psy573 103 AGTRESTDAVLRV 115 (216)
Q Consensus 103 ~~~~~~~~~~l~v 115 (216)
.+.. ...+.|.|
T Consensus 85 ~g~~-~~~~~l~V 96 (98)
T 1gl4_B 85 FAMD-QGTATLHV 96 (98)
T ss_dssp SCEE-EEEEEEEE
T ss_pred CCcc-ccEEEEEE
Confidence 7764 44455554
No 389
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.45 E-value=4.7e-13 Score=81.47 Aligned_cols=83 Identities=22% Similarity=0.318 Sum_probs=61.9
Q ss_pred cceEEeCCCc-eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC--CeeeecCC---eEEEecCCCCCCeEEEEEEEc
Q psy573 118 KPYIIRGPKD-TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED--RMSVLPSR---SLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 118 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~~~~~~~~---~l~i~~~~~~d~g~y~C~~~n 191 (216)
+|.+...+.. ..+.+|+.+.|.|.+ +.|.+.+.|++++..+... ++.....+ .|.|.++..+|+|.|+|.+
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 91 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV-- 91 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE--
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE--
Confidence 3444444444 688999999999999 6888899999999887654 44443333 7999999999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy573 192 AVGKISASATLTVQ 205 (216)
Q Consensus 192 ~~~~~~~~~~l~v~ 205 (216)
+....+..|.|.
T Consensus 92 --~~~~~~~~l~V~ 103 (104)
T 1pd6_A 92 --GGEKCSTELFVK 103 (104)
T ss_dssp --TTEEECCEEEEE
T ss_pred --CCCcEEEEEEEe
Confidence 334455556554
No 390
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.44 E-value=5.6e-13 Score=81.04 Aligned_cols=81 Identities=17% Similarity=0.331 Sum_probs=62.0
Q ss_pred ecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEE--EecC----cEEEEcccCCCCCceEEEEEEcCCCCcccce
Q psy573 37 AAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLR--LVDG----TNLAIQDSRKTDDGRYQCVVKNVAGTRESTD 110 (216)
Q Consensus 37 ~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~~~~----~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 110 (216)
..|+.+.|.|.+ .+.|.|.+.|++++..+......... .... +.|.|.++..+|+|.|+|.+.|..|.. ...
T Consensus 14 ~~~~~~~~~c~v-~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~-~~~ 91 (103)
T 1wwb_X 14 TSDHHWCIPFTV-KGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKD-EKQ 91 (103)
T ss_dssp CCCCEEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEE-EEE
T ss_pred eECcEEEEEEEE-EEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcE-eEE
Confidence 468889999998 89999999999999988544321121 1222 349999999999999999999998875 456
Q ss_pred eEEEEeecc
Q psy573 111 AVLRVLVKP 119 (216)
Q Consensus 111 ~~l~v~~~p 119 (216)
+.|.|...|
T Consensus 92 ~~l~V~~~P 100 (103)
T 1wwb_X 92 ISAHFMGWP 100 (103)
T ss_dssp EEECCSCCC
T ss_pred EEEEECCCC
Confidence 677766554
No 391
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.44 E-value=5.1e-15 Score=93.04 Aligned_cols=101 Identities=18% Similarity=0.288 Sum_probs=75.2
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCe-eEEeeCCEEeccccCceEEEe----c---CcEEEE
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPT-LVWKKNGHPIDFENSKRLRLV----D---GTNLAI 84 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~----~---~~~l~i 84 (216)
+..+.|.|.. +|.+.. +....+.+|+.+.|.|.+ .+.|.+. +.|++++..+......++... . ...|.|
T Consensus 4 ~~~~~l~V~~-~P~i~~-~~~~~~~~G~~v~l~C~~-~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I 80 (122)
T 2cry_A 4 GSSGTLTVNG-PPIISS-TQTQHALHGEKGQIKCFI-RSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTI 80 (122)
T ss_dssp SCCCCCCCCS-SCCEEE-ECCCCCCTTSCCCCCEEE-CCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEEC
T ss_pred ceEEEEEEec-CCCccC-CCeEEEecCCCEEEEEEE-eecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEE
Confidence 3456677665 467766 778889999999999998 7888876 999999988754323333331 2 237999
Q ss_pred cccCCCCC-ceEEEEEEcCCCCcccceeEEEEee
Q psy573 85 QDSRKTDD-GRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 85 ~~~~~~d~-g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
.+++.+|. |.|.|.+.|..|.. ...+.|.|..
T Consensus 81 ~~v~~~D~~G~Y~C~a~N~~G~~-~~~~~l~V~~ 113 (122)
T 2cry_A 81 SNIVRADFQTIYNCTAWNSFGSD-TEIIRLKEQG 113 (122)
T ss_dssp TTCCHHHHHSCEEEEEECSSCEE-EEEECCCCSC
T ss_pred cCCChhhCCceEEEEEECCCCeE-EEEEEEEECC
Confidence 99999999 99999999988865 3445555543
No 392
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.44 E-value=7.9e-13 Score=79.15 Aligned_cols=82 Identities=28% Similarity=0.446 Sum_probs=63.8
Q ss_pred ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 119 PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 119 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+.+...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+... ++..... ..|.|.++..+|+|.|+|.+ |
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g 83 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----G 83 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----T
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----C
Confidence 344555677889999999999999 7888899999999876533 3333322 36999999999999999999 5
Q ss_pred ceEEEEEEEEE
Q psy573 195 KISASATLTVQ 205 (216)
Q Consensus 195 ~~~~~~~l~v~ 205 (216)
....++.|.|.
T Consensus 84 ~~~~~~~l~V~ 94 (95)
T 2k1m_A 84 SSKVKFDLKVI 94 (95)
T ss_dssp TEEEEEEEEEE
T ss_pred CceEEEEEEEe
Confidence 56667777765
No 393
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.43 E-value=2.6e-13 Score=83.26 Aligned_cols=87 Identities=29% Similarity=0.437 Sum_probs=64.6
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEE
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~ 99 (216)
.+|.|...+....+.+|+.++|.|.+ .+. +.+.|++++..+... .++....+ ..|.|.+++.+|+|.|+|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~~--p~v~W~k~~~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 81 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCEL-SKV--APVEWKKGPETLRDG--GRYSLKQDGTRCELQIHDLSVADAGEYSCMC 81 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEB-SSS--CCCEEESSSSBCCSS--SSCEEEEETTEEEEEESSCCTTTCSEEEEEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEe-CCC--CeeEEEECCEECCCC--CCEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 46777777888999999999999998 443 689999998877432 33333322 25999999999999999999
Q ss_pred EcCCCCcccceeEEEEeecc
Q psy573 100 KNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 100 ~~~~~~~~~~~~~l~v~~~p 119 (216)
.+ ......|.|...|
T Consensus 82 ~n-----~~~~~~l~V~~~p 96 (108)
T 2dm7_A 82 GQ-----ERTSATLTVRALP 96 (108)
T ss_dssp TT-----EEEEEECEEECCC
T ss_pred cC-----CEEEEEEEEecCC
Confidence 44 2345566666644
No 394
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=1.1e-12 Score=79.86 Aligned_cols=74 Identities=24% Similarity=0.426 Sum_probs=57.5
Q ss_pred ccceEecccc-eEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC---cEEEEcccCCCCCceEEEEE
Q psy573 24 REEFRVQPKS-QRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG---TNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 24 ~~~~~~~~~~-~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~ 99 (216)
+|.|...+.. ..+.+|+.+.|.|.+ +.|.+.+.|++++..+.... .++....+ ..|.|.+++.+|+|.|.|.+
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~--~~p~~~v~W~k~g~~l~~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL--ADHDAEVKWLKNGQEIQMSG-SKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC--SSSSSCCEEEESSSEECCCS-SSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE--cCCCCEEEEEECCEECCCCC-CeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 4566666655 789999999999998 47788899999999885431 23333322 28999999999999999999
Q ss_pred E
Q psy573 100 K 100 (216)
Q Consensus 100 ~ 100 (216)
.
T Consensus 92 ~ 92 (104)
T 1pd6_A 92 G 92 (104)
T ss_dssp T
T ss_pred C
Confidence 4
No 395
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.43 E-value=6.4e-13 Score=90.97 Aligned_cols=101 Identities=21% Similarity=0.407 Sum_probs=72.5
Q ss_pred hhceeeEEeec--cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-cCcEEEEcccCCC
Q psy573 14 EKKKLKIEMLR--EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-DGTNLAIQDSRKT 90 (216)
Q Consensus 14 ~~~~l~v~~~~--~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~ 90 (216)
..+.|.|...+ |.+...+.. +.+|+.+.|.|.+ .+.| +.+.|++++..+.. ..++... .+..|.|.++..+
T Consensus 100 ~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~-~~~p-p~i~W~~~g~~l~~--~~~~~~~~~~~~L~i~~v~~~ 173 (208)
T 3r4d_A 100 ATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLS-NDIG-ANIQWLFNSQSLQL--TERMTLSQNNSILRIDPIKRE 173 (208)
T ss_dssp EEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEEC-SCTT-CEEEEEETTEECCC--CSSEEEETTTTEEEESSCCGG
T ss_pred EEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEEC-CCCC-CceEEEECCEeCCC--CCCeEEcCCCCEEEEeccCHH
Confidence 44556665443 333333333 8899999999998 5555 79999999998843 3344444 3478999999999
Q ss_pred CCceEEEEEEcCCCCcccceeEEEEeecce
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 120 (216)
|+|.|+|.+.|..|...+..+.|.|..++.
T Consensus 174 d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 174 DAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp GCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred hCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 999999999999998878888888776653
No 396
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.43 E-value=2.7e-12 Score=86.64 Aligned_cols=94 Identities=27% Similarity=0.448 Sum_probs=74.9
Q ss_pred cceEEeCCC--ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee-cCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPK--DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL-PSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .... ....|.|.++..+|.|.|+|.+.|..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 455544433 3467789999999999999999999999998876543 3332 34579999999999999999999999
Q ss_pred cceEEEEEEEEEecceee
Q psy573 194 GKISASATLTVQSKYLKV 211 (216)
Q Consensus 194 ~~~~~~~~l~v~~~p~~~ 211 (216)
+.....+.|.|..+|.+.
T Consensus 82 ~~~~~~~~l~V~~~p~~~ 99 (192)
T 2va4_A 82 GEDEKQAFLQVFVQPHII 99 (192)
T ss_dssp EEEEEEEEEEEEEEEEEE
T ss_pred cccceEEEEEEEccCccc
Confidence 988888888888777654
No 397
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.43 E-value=2.4e-12 Score=85.91 Aligned_cols=96 Identities=14% Similarity=0.218 Sum_probs=69.5
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|.. +.+.+.+....+.+|+.+.|.|.+....+.+.+.|++++..+.. ...+..|.|.+++.+|+
T Consensus 79 s~~~~l~V~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-------~~~~~~L~i~~v~~~d~ 149 (175)
T 1fnl_A 79 SDPVQLEVHI--GWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-------FHHNSDFHIPKATLKDS 149 (175)
T ss_dssp CCCEEEEEEC--SSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-------EEECCCEEESSCCGGGC
T ss_pred cccEEEEEeC--CCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-------CCCCCEEEEcccChhhC
Confidence 4455666653 33445555677899999999999833334459999999988732 22356899999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEee
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
|.|+|.+.|..+...+..+.|.|..
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 150 GSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC
T ss_pred eEEEEEEEcCCCCccCccEEEEEeC
Confidence 9999999997655445566666653
No 398
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.14 E-value=1.3e-14 Score=97.38 Aligned_cols=155 Identities=17% Similarity=0.219 Sum_probs=90.8
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE--E---ecc-------ccCceEEEe-----cCcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH--P---IDF-------ENSKRLRLV-----DGTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~--~---~~~-------~~~~~~~~~-----~~~~l~i~~~~~ 89 (216)
+...|..+.+.+|+.++|.|.+ .+.+...+.||+... . +.. ...+|+... ....|+|.+++.
T Consensus 3 v~Q~p~~v~v~~G~svtL~C~~-s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~ 81 (185)
T 3c6l_A 3 VRQSPQSLTVWEGETAILNCSY-EDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQP 81 (185)
Confidence 3445677889999999999987 444445899998531 1 100 123344432 234799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccCCCCC
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAMPEDR 163 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~ 163 (216)
+|+|.|+|.+.+... .......|.|... |.+..... ..+.+.|.|.+.+ +|.+++.|+.+......+.
T Consensus 82 ~DsG~Y~C~~~~~~~-~fg~gT~L~V~~~~~~~~P~V~~~~~-----~~~~vtL~C~~~gf~P~p~v~~~~~~~~~~~~~ 155 (185)
T 3c6l_A 82 GDSATYFCAASDNRI-FFGDGTQLVVKPNIQNPEPAVYQLKD-----PRSQDSTLCLFTDFDSQINVPKTMESGTFITDK 155 (185)
Confidence 999999999875211 1112234555432 32222111 1227899999977 5888999988765543322
Q ss_pred eeee-cCCeEEEecC-CCCCCeEEEEE
Q psy573 164 MSVL-PSRSLQLSDV-RLEDGGEYVCE 188 (216)
Q Consensus 164 ~~~~-~~~~l~i~~~-~~~d~g~y~C~ 188 (216)
.... ..-.+.+..+ .+++...+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~w~~~~~~~c~ 182 (185)
T 3c6l_A 156 TVLDMKAMDSKSNGAIAWSNQTSFTCQ 182 (185)
Confidence 2111 1112333333 34445577775
No 399
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.42 E-value=7e-13 Score=88.55 Aligned_cols=99 Identities=21% Similarity=0.323 Sum_probs=73.8
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|. ++.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+... ..+..|.|.+++.+|+
T Consensus 76 s~~~~l~V~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~~~L~i~~v~~~d~ 146 (176)
T 1f2q_A 76 SEPVYLEVF--SDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-------YENHNISITNATVEDS 146 (176)
T ss_dssp CCCEEEEEE--CSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-------CCSSEEEESSCCGGGC
T ss_pred cccEEEEEe--CcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-------cCCCeEEECCCCcccC
Confidence 345556665 3444555556788899999999998445667799999999887321 2246899999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecce
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 120 (216)
|.|+|.+.|..+...+..+.|.|..+|.
T Consensus 147 G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 147 GTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred EEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 9999999987554446667888877663
No 400
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.42 E-value=6.8e-12 Score=86.22 Aligned_cols=164 Identities=18% Similarity=0.297 Sum_probs=97.7
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CE---Ee-------ccccCceEEEec---CcEEEEcccCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GH---PI-------DFENSKRLRLVD---GTNLAIQDSRKTD 91 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~---~~-------~~~~~~~~~~~~---~~~l~i~~~~~~d 91 (216)
++..|.++.+..|+.++|.|.. .......+.||+. |+ .+ ......|+.... +.+|+|.+++.+|
T Consensus 4 lTQsP~sls~s~G~~vtisC~~-S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs~lq~eD 82 (259)
T 4f9l_D 4 LTQSPSSLSASLGDTITITCHA-SQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSATGFTLTISSLQPED 82 (259)
T ss_dssp EEEECSBCCBCTTCEEEEEEEE-SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGG
T ss_pred EEccCCeEEECCCCCEEEEEEc-CCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccCCeEEEEEcccChhh
Confidence 4556778889999999999986 3333345889973 21 11 111223443321 2369999999999
Q ss_pred CceEEEEEEcCCCCcccceeEEEEeec---ceE-------------------EeCCCceeEeCCCcEEEEEEeCCCCC--
Q psy573 92 DGRYQCVVKNVAGTRESTDAVLRVLVK---PYI-------------------IRGPKDTTVSAGSIIVFECSVGGDAV-- 147 (216)
Q Consensus 92 ~g~y~C~~~~~~~~~~~~~~~l~v~~~---p~~-------------------~~~~~~~~~~~g~~~~l~C~~~~~p~-- 147 (216)
++.|+|..........-...+|.+++. |.. ........+..|+.+.|.|.+.|..-
T Consensus 83 ~A~YyC~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~ 162 (259)
T 4f9l_D 83 IATYYCQQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTR 162 (259)
T ss_dssp CEEEEEEECSSSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGG
T ss_pred CEEEEEeecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCccc
Confidence 999999866443221122234444321 110 01112236788999999999987643
Q ss_pred cEEEEeeCC--cc------CC------------CCCeeeecC-----CeEEEecCCCCCCeEEEEEEEc
Q psy573 148 LTVHWKRLG--SA------MP------------EDRMSVLPS-----RSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 148 ~~i~W~~~~--~~------~~------------~~~~~~~~~-----~~l~i~~~~~~d~g~y~C~~~n 191 (216)
-.+.|.+.. +. +. ..+..+..+ ..|.+.+++.+|.+.|.|....
T Consensus 163 y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr~~ 231 (259)
T 4f9l_D 163 YYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRED 231 (259)
T ss_dssp SCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEEeC
Confidence 347787631 11 10 112333211 1388889999999999997543
No 401
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.41 E-value=2.9e-12 Score=86.86 Aligned_cols=95 Identities=17% Similarity=0.264 Sum_probs=76.1
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeC-CCCCcEEEEeeCCccCCCCC---eeee--c--------CCeEEEecCCCCCCe
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVG-GDAVLTVHWKRLGSAMPEDR---MSVL--P--------SRSLQLSDVRLEDGG 183 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~---~~~~--~--------~~~l~i~~~~~~d~g 183 (216)
+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... .... . ...|.|.++..+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 45677778888999999999999998 88999999999998876542 1221 1 357999999999999
Q ss_pred EEEEEEEcCCcceE-EEEEEEEEecceeee
Q psy573 184 EYVCEAENAVGKIS-ASATLTVQSKYLKVI 212 (216)
Q Consensus 184 ~y~C~~~n~~~~~~-~~~~l~v~~~p~~~~ 212 (216)
.|+|.+.|..+... ..+.|.|..+|.+..
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~ 111 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLPYFLE 111 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSCEEEE
T ss_pred EEEEEEEeCCCceecccEEEEEecCCeEEc
Confidence 99999999887643 348888888776544
No 402
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.41 E-value=4.3e-12 Score=87.07 Aligned_cols=157 Identities=17% Similarity=0.239 Sum_probs=96.6
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc--c-----cCceEEEec-----CcEEEEcccC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF--E-----NSKRLRLVD-----GTNLAIQDSR 88 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~--~-----~~~~~~~~~-----~~~l~i~~~~ 88 (216)
.+...|..+.+.+|+.++|.|.+ .+.....+.||+.. . .+.. . ..+|+.... ...|+|.+++
T Consensus 5 ~v~Q~p~~~~v~~G~svtL~C~~-s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~ 83 (210)
T 2eys_A 5 QVEQSPQSLIILEGKNCTLQCNY-TVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQ 83 (210)
T ss_dssp CEEEECSEEEEETTCCEEEEEEE-CCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCC
T ss_pred eEEEeCCEEEEecCCCEEEEEEE-CCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCC
Confidence 45556777899999999999997 44445689999842 1 1211 1 133444431 2479999999
Q ss_pred CCCCceEEEEEEcCC---C-CcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCCCCc-EEEEeeCCcc
Q psy573 89 KTDDGRYQCVVKNVA---G-TRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGDAVL-TVHWKRLGSA 158 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~---~-~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~ 158 (216)
.+|+|.|+|.+.+.. . ........|.|... |.+..... ..+.+.|.|.+.+..+. .+.+..
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~-----~~~~~tl~Cl~~gf~P~~~v~~~~---- 154 (210)
T 2eys_A 84 LSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRD-----SKSSDKSVCLFTDFDSQTNVSQSK---- 154 (210)
T ss_dssp GGGCEEEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECC-----CSSSSCEEEEEESCCTTCCCCCCS----
T ss_pred cccCceEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCC-----CCCCceEEEEcccccCCcEecccc----
Confidence 999999999998632 1 11122345666432 33322211 12378899999877544 332111
Q ss_pred CCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 159 MPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 159 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
...........|.+..+...+.|.|.|.+.|..+
T Consensus 155 --~~~~~~t~~~~l~~~~~~~~~~~~~~w~~~~~~~ 188 (210)
T 2eys_A 155 --DSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFA 188 (210)
T ss_dssp --STTEEECCCEEEEETTTTEEEEEEEEEECSTTCC
T ss_pred --CcceEccCchhcchhcccccccchhhccCCCceE
Confidence 1112222344577777888889999999887654
No 403
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.41 E-value=1.2e-12 Score=81.37 Aligned_cols=92 Identities=18% Similarity=0.309 Sum_probs=64.7
Q ss_pred ecccceEEecCCcEEEEeeCCCC-CCCCeeEEeeCCEEec-----------cccCceEEEecCcEEEEcccCCCCCceEE
Q psy573 29 VQPKSQRVAAGDTALLECGPPRG-HPEPTLVWKKNGHPID-----------FENSKRLRLVDGTNLAIQDSRKTDDGRYQ 96 (216)
Q Consensus 29 ~~~~~~~~~~G~~~~l~C~~~~~-~~~~~~~W~~~~~~~~-----------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 96 (216)
..+..+.+.+|++++|.|.+... .+...+.|++++..+. ....+|+.+..+.+|.|.+++.+|+|.|+
T Consensus 8 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~ 87 (117)
T 3q0h_A 8 ETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYF 87 (117)
T ss_dssp EESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEE
T ss_pred EccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEE
Confidence 34567889999999999987321 2334789999865432 11245666656778999999999999999
Q ss_pred EEEEcC-CCCcccceeEEEEeecceE
Q psy573 97 CVVKNV-AGTRESTDAVLRVLVKPYI 121 (216)
Q Consensus 97 C~~~~~-~~~~~~~~~~l~v~~~p~~ 121 (216)
|.+... .+. ....+.|.|..+|..
T Consensus 88 C~v~~~~~g~-~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 88 CIYHTYPDGT-YTGRIFLEVLESSVA 112 (117)
T ss_dssp EEEEEETTCC-EEEEEEEEEECC---
T ss_pred EEEEECCCCC-eEEEEEEEEEccCcc
Confidence 998653 343 355678888887754
No 404
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.6e-12 Score=78.83 Aligned_cols=79 Identities=22% Similarity=0.460 Sum_probs=59.5
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec-C--cEEEEcccCCCCCceEEEEEEcCCCCccc
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD-G--TNLAIQDSRKTDDGRYQCVVKNVAGTRES 108 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~--~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 108 (216)
....+.+|+.+.|.|.+ . .|.+.+.||+++..+.... ++.... + ..|.|.++..+|+|.|+|.+.+. .
T Consensus 19 ~~~~v~~G~~v~L~C~~-~-~p~~~v~W~k~g~~~~~~~--~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~-----~ 89 (102)
T 2eo1_A 19 REVQAEAGASATLSCEV-A-QAQTEVTWYKDGKKLSSSS--KVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ-----Q 89 (102)
T ss_dssp EEEEEETTCCEEECCBC-S-CSSSCCEEEETTEECCCCS--SEEEEEETTEEEEEETTCCTTTCSCEEEEETTE-----E
T ss_pred ccEEEeCCCcEEEEEEe-c-CCCCceEEEECCEECCCCC--CEEEEEcCCEEEEEECCCCcccCEEEEEEcCCC-----c
Confidence 34689999999999998 4 7888999999999885433 333332 2 47999999999999999998542 3
Q ss_pred ceeEEEEeecc
Q psy573 109 TDAVLRVLVKP 119 (216)
Q Consensus 109 ~~~~l~v~~~p 119 (216)
..+.|.|..+|
T Consensus 90 ~~~~l~V~~p~ 100 (102)
T 2eo1_A 90 LSFRLQVAGQC 100 (102)
T ss_dssp CCEEEEEESCC
T ss_pred EEEEEEEeCCC
Confidence 34666666543
No 405
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.40 E-value=3.9e-12 Score=99.61 Aligned_cols=160 Identities=13% Similarity=0.151 Sum_probs=99.1
Q ss_pred EecCCcEEEEeeCCCCCCC---CeeEEeeCCEEeccccCceEEEec------CcEEEEcccCCCCCceEEEEEEcCCCCc
Q psy573 36 VAAGDTALLECGPPRGHPE---PTLVWKKNGHPIDFENSKRLRLVD------GTNLAIQDSRKTDDGRYQCVVKNVAGTR 106 (216)
Q Consensus 36 ~~~G~~~~l~C~~~~~~~~---~~~~W~~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 106 (216)
+..+....|.|.+....+. ..+.|++++..+............ .+.|.|......|.+.|+|.+.+.....
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~ 434 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 434 (551)
T ss_pred eeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCC
Confidence 6678899999998444443 589999998765321111001111 2357777777778899999998765522
Q ss_pred -ccceeEEE--EeecceEEeCCCceeEeCCCcEEEEEEeCCCCC--cEEEEeeCCccCCCC---CeeeecCCe------E
Q psy573 107 -ESTDAVLR--VLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAV--LTVHWKRLGSAMPED---RMSVLPSRS------L 172 (216)
Q Consensus 107 -~~~~~~l~--v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~---~~~~~~~~~------l 172 (216)
....+.+. ...+|.+...+....+..|+.+.|.|.+.+..+ ..|.|++++..+... ......+++ |
T Consensus 435 ~~~~~~~~~~~~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~l 514 (551)
T 1ntl_A 435 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKL 514 (551)
T ss_pred CeEEEEecCCCCCcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccceeCCCCCEEEEEEE
Confidence 11222222 335566544433334556889999999988543 479999999876421 111122233 4
Q ss_pred EEecCCCCCCeEEEEEEEcCCcc
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGK 195 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~ 195 (216)
.+......+.+.|+|.|.|....
T Consensus 515 ~v~~~~~~~~~~ytC~V~h~~l~ 537 (551)
T 1ntl_A 515 NVQKSNWEAGNTFTCSVLHEGLH 537 (551)
T ss_pred EEcHHHcCCCCeEEEEEEECCCC
Confidence 44444444588999999987654
No 406
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.40 E-value=2.6e-12 Score=87.82 Aligned_cols=81 Identities=15% Similarity=0.256 Sum_probs=63.0
Q ss_pred eEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeee-ecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy573 129 TVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSV-LPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTVQSK 207 (216)
Q Consensus 129 ~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~ 207 (216)
.+.+|+.+.|.|.+.|.|.|.+.|++............ .....|.|.++..+|+|.|.|.+.|..+..+..+.|.|..+
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~ 91 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSF 91 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred EEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeC
Confidence 44589999999999999999999998432211111111 12356999999999999999999999988888899999877
Q ss_pred ce
Q psy573 208 YL 209 (216)
Q Consensus 208 p~ 209 (216)
|.
T Consensus 92 p~ 93 (202)
T 1vca_A 92 PK 93 (202)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 407
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.40 E-value=3.3e-13 Score=86.45 Aligned_cols=83 Identities=23% Similarity=0.388 Sum_probs=64.6
Q ss_pred eccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecccc--------CceEEEe------cCcEEEEcccC
Q psy573 23 LREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFEN--------SKRLRLV------DGTNLAIQDSR 88 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~--------~~~~~~~------~~~~l~i~~~~ 88 (216)
.+|.|...|....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ..+.... .++.|.|.+++
T Consensus 20 ~pP~~~~~p~~~~v~~G~~v~L~C~~-~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 98 (137)
T 3qr2_A 20 HMAGFVQAPLSQQRWVGGSVELHCEA-VGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLV 98 (137)
T ss_dssp -CCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCC
T ss_pred CCCeEEcCCCCEEEeCCCCEEEEEEE-eeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCC
Confidence 46889899999999999999999998 788999999999766442110 1122221 24589999999
Q ss_pred CCCCceEEEEEEcCCCCc
Q psy573 89 KTDDGRYQCVVKNVAGTR 106 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~ 106 (216)
.+|+|.|+|.+.|..|..
T Consensus 99 ~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 99 EEDTGTYECRASNDPDRN 116 (137)
T ss_dssp GGGCEEEEEEEECCTTSS
T ss_pred cccCEEEEEEEEecCCcc
Confidence 999999999999987764
No 408
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.40 E-value=5.4e-12 Score=84.92 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=70.9
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCC---CCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMP---EDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..+.....++.|.|.++..+|+|.|+|.+.|..+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 81 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 81 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC
Confidence 4566677788899999999999999988999999999987764 3344555667899999999999999999998875
Q ss_pred c--eEEEEEEEEEecceee
Q psy573 195 K--ISASATLTVQSKYLKV 211 (216)
Q Consensus 195 ~--~~~~~~l~v~~~p~~~ 211 (216)
. ....+.+.+..+|.+.
T Consensus 82 ~~~~~~~~~l~v~~~p~~~ 100 (189)
T 2v5t_A 82 GEIDFRDIIVIVNVPPAIS 100 (189)
T ss_dssp TEEEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEEEEecCCCCcc
Confidence 4 3355667777666543
No 409
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.40 E-value=1.4e-12 Score=84.34 Aligned_cols=99 Identities=21% Similarity=0.485 Sum_probs=66.9
Q ss_pred ceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEee---------CCEEeccccCceEEEec----CcEE
Q psy573 16 KKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKK---------NGHPIDFENSKRLRLVD----GTNL 82 (216)
Q Consensus 16 ~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~---------~~~~~~~~~~~~~~~~~----~~~l 82 (216)
+...+...+..+...+..+.+.+|++++|.|.+ .+.+.+.+.|++ ++..+ ...++.... +.+|
T Consensus 30 ~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~i~W~~~~~~~i~~~~~~~~---~~~r~~~~~~~~~~~~L 105 (145)
T 1z9m_A 30 AMADINLSQDDSQPWTSDETVVAGGTVVLKCQV-KDHEDSSLQWSNPAQQTLYFGEKRAL---RDNRIQLVTSTPHELSI 105 (145)
T ss_dssp --------CCTTCCBCCCEEEETTSCEEEEEEC-SCCTTCCEEEECTTCCEEEETTEECS---CCTTEEEEEECSSEEEE
T ss_pred HhhhheecccceecCCceEEEEcCCCEEEEEEE-cCCCCcEEEEECCCCcEEEECCceec---ccCCEEEecCCCCeEEE
Confidence 333333334455667888999999999999998 666778999994 22222 123333222 4579
Q ss_pred EEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecce
Q psy573 83 AIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPY 120 (216)
Q Consensus 83 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 120 (216)
.|.+++.+|+|.|+|.+.+. +. ....+.|.|..+|.
T Consensus 106 ~I~~v~~~DsG~Y~C~~~n~-~~-~~~~~~L~V~~~P~ 141 (145)
T 1z9m_A 106 SISNVALADEGEYTCSIFTM-PV-RTAKSLVTVLGIPQ 141 (145)
T ss_dssp EECSCCGGGCEEEEEEECSS-SC-EEEEEEEEEECCCC
T ss_pred EECCCChhhCEEEEEEEEcC-CC-ceEEEEEEEEeCCC
Confidence 99999999999999999988 54 35567777776653
No 410
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.39 E-value=2.9e-12 Score=87.72 Aligned_cols=98 Identities=13% Similarity=0.182 Sum_probs=70.2
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|... +.+ ..+....+.+|+.++|.|.+..+.|.+.+.|++++..+.. ...+..|.|.+++.+|+
T Consensus 79 s~~~~l~V~~~-p~~-~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~-------~~~~~~L~i~~v~~~D~ 149 (204)
T 3sgj_C 79 SDPVQLEVHIG-WLL-LQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY-------FHHNSDFYIPKATLKDS 149 (204)
T ss_dssp CCCEEEEEECS-SEE-EECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-------EEECCCEEESSCCGGGC
T ss_pred cccEEEEEecC-ceE-ecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-------ccCCceEEECcCCcccC
Confidence 44556666543 333 3344478889999999999844446689999999987632 22356899999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEEeecc
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
|.|+|.+.|..+...+..+.|.|..++
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 150 GSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 999999999654445666777777654
No 411
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.39 E-value=1.6e-12 Score=89.78 Aligned_cols=98 Identities=23% Similarity=0.371 Sum_probs=77.0
Q ss_pred hhhceeeEEeec--------------cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEec
Q psy573 13 EEKKKLKIEMLR--------------EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVD 78 (216)
Q Consensus 13 ~~~~~l~v~~~~--------------~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 78 (216)
+..+.|.|...+ |.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .
T Consensus 93 s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~~~--------~ 163 (218)
T 3k0w_A 93 SQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHE--------T 163 (218)
T ss_dssp CCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEE-EBSSCCEEEEEETTEECTTC--------C
T ss_pred eeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEe-cccCCCeEEEEECCEECCCC--------C
Confidence 445667666542 566777778899999999999998 78889999999999887432 2
Q ss_pred CcEEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecc
Q psy573 79 GTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 79 ~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
...|.|.++..+|+|.|+|.+.|..+...+..+.|.|....
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 164 KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 35799999999999999999999877755667777776533
No 412
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.39 E-value=2e-12 Score=86.69 Aligned_cols=94 Identities=26% Similarity=0.389 Sum_probs=73.3
Q ss_pred HhhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCC-eeEEeeCCEEeccccCceEEEecCcEEEEcccCCC
Q psy573 12 EEEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEP-TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKT 90 (216)
Q Consensus 12 ~~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 90 (216)
.+..+.|.|.. +|.+...+....+.+|+.+.|.|.+ .+.|.+ .+.|++++..+.... .....|.|.++ +
T Consensus 87 ~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~------~~~~~L~i~~~--~ 156 (182)
T 1rhf_A 87 ISQPVWLTVEG-VPFFTVEPKDLAVPPNAPFQLSCEA-VGPPEPVTIVWWRGTTKIGGPA------PSPSVLNVTGV--T 156 (182)
T ss_dssp ECCCEEEEEEC-SCEEEECCCCEEECTTCCEEEEEEE-ECSSSCCEEEEEETTEECSCSE------ESSEEEEECCC--S
T ss_pred EEEEEEEEEec-CCeEEecCcceEecCCCEEEEEeEe-cCCCCCCEEEEEcCCeECCCCC------CCceEEEEecc--c
Confidence 44566777765 4778888888899999999999998 788888 999999998873221 14567999988 5
Q ss_pred CCceEEEEEEcCCCCcccceeEEEE
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v 115 (216)
|+|.|+|.+.|..|...+..+.|.|
T Consensus 157 d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 157 QSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCeEEEEEEECCCCCcccceEEEEe
Confidence 8999999999988765444566655
No 413
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.39 E-value=4.3e-12 Score=85.21 Aligned_cols=100 Identities=20% Similarity=0.390 Sum_probs=72.9
Q ss_pred hhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCC-CCeeEEee---CCEE-eccccCceEEEecC---cEEEEc
Q psy573 14 EKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHP-EPTLVWKK---NGHP-IDFENSKRLRLVDG---TNLAIQ 85 (216)
Q Consensus 14 ~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~-~~~~~W~~---~~~~-~~~~~~~~~~~~~~---~~l~i~ 85 (216)
..+.|.|.. +|.+...+....+.+|+.+.|.|.+ .+.| .+.+.|++ ++.. +......++....+ ..|.|.
T Consensus 74 ~~~~l~V~~-~P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 151 (184)
T 3b5h_A 74 GTANIQLHG-PPRVKAVKSSEHINEGETAMLVCKS-ESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIE 151 (184)
T ss_dssp CEEEEEECC-SCCCEESCSEEEECTTSCEEEEEEC-CCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEEC
T ss_pred cEEEEEEec-CCceeecCCCcEEcCCCcEEEEEEE-CCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEe
Confidence 445666654 4777777777889999999999998 6777 78999999 4443 32222244444322 379999
Q ss_pred ccC-CCCCceEEEEEEcCCCCcccceeEEEEe
Q psy573 86 DSR-KTDDGRYQCVVKNVAGTRESTDAVLRVL 116 (216)
Q Consensus 86 ~~~-~~d~g~y~C~~~~~~~~~~~~~~~l~v~ 116 (216)
+++ .+|+|.|.|.+.|..|.. ...+.|.|.
T Consensus 152 ~v~~~~d~G~Y~C~a~N~~g~~-~~~~~l~V~ 182 (184)
T 3b5h_A 152 NLNMEADPGQYRCNGTSSKGSD-QAIITLRVR 182 (184)
T ss_dssp SCCTTTSSEEEEEEEEETTEEE-EEEEEEEEC
T ss_pred eccccccCceEEEEEEeCCCcc-eEEEEEEEe
Confidence 999 999999999999988765 334566554
No 414
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.38 E-value=4.3e-12 Score=86.98 Aligned_cols=91 Identities=27% Similarity=0.409 Sum_probs=71.8
Q ss_pred eEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC------------C-CCCeeeecCCeEEEecCCCCCCeEEE
Q psy573 120 YIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM------------P-EDRMSVLPSRSLQLSDVRLEDGGEYV 186 (216)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~------------~-~~~~~~~~~~~l~i~~~~~~d~g~y~ 186 (216)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ . ..+... ....|.|.++..+|+|.|+
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~L~i~~v~~~D~G~Y~ 81 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTF-SSSGITFSSVTRKDNGEYT 81 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEE-ETTEEEESCCCGGGCEEEE
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEe-eceeEEEcccCcccCeEEE
Confidence 3455567778999999999999998899999999987652 1 122322 3478999999999999999
Q ss_pred EEEEcCCc--ceEEEEEEEEEecceee
Q psy573 187 CEAENAVG--KISASATLTVQSKYLKV 211 (216)
Q Consensus 187 C~~~n~~~--~~~~~~~l~v~~~p~~~ 211 (216)
|.+.|..| .....+.|.|..+|.+.
T Consensus 82 C~~~~~~g~~~~~~~~~l~V~~~p~~~ 108 (212)
T 1f97_A 82 CMVSEEGGQNYGEVSIHLTVLVPPSKP 108 (212)
T ss_dssp EEEEETTSSSEEEEEEEEEEEBCCCCC
T ss_pred EEEEccCCCcccEEEEEEEEEcCCCCc
Confidence 99999877 56778888888777554
No 415
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=99.38 E-value=8.2e-13 Score=89.45 Aligned_cols=130 Identities=16% Similarity=0.171 Sum_probs=82.1
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CE---Eecc-------ccCceEEEec-----CcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GH---PIDF-------ENSKRLRLVD-----GTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~---~~~~-------~~~~~~~~~~-----~~~l~i~~~~~ 89 (216)
+...|..+.+.+|+.++|.|.+ .+.....+.||+. ++ .+.. ...+|+.... ...|+|.+++.
T Consensus 3 VtQ~p~~v~v~~G~svtL~C~~-s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~ 81 (200)
T 3rgv_A 3 VTQMQGQVTLSENDFLFINCTY-STTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQE 81 (200)
T ss_dssp EECCCSEEEEETTCCEEECCEE-ECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCS
T ss_pred cEECCCEEEEeCCCCEEEEEEe-cCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcC
Confidence 4556778899999999999997 3333458999984 21 1110 1134444431 24699999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCccCCCC
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSAMPED 162 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~ 162 (216)
+|+|.|.|.+.............|.|... |.+.... .....+.|.|.+.+. |..++.|.+++..+...
T Consensus 82 ~DsG~Y~Ca~~~~~~~~fG~GT~L~V~~~~~~~~P~V~~~~-----~~~~~~tl~Cl~~gf~P~i~v~~~~~g~~~~~~ 155 (200)
T 3rgv_A 82 IDSAVYYCAANSGTYQRFGTGTKLQVVPNIQNPDPAVYQLR-----DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITD 155 (200)
T ss_dssp TTCEEEEEEEESSSCCCCCCCEEEEEECCCSSCCCEEEEEE-----ESSSSSCEEEEEESCCTTCCCCCCSSTTCEECC
T ss_pred ccCCCEEEEeccCcccccCcCEEEEEeCCCCCCCCeEEEcc-----CCCCCceEEEEcccccCCeEeEeccCCcEEeec
Confidence 99999999997432112223345666542 2222111 112346899999776 44468999998876544
No 416
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.38 E-value=6.8e-12 Score=76.98 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=62.6
Q ss_pred eeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC--------------------CCCCeeeecCCeEEEecCCCCCCeEEEE
Q psy573 128 TTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM--------------------PEDRMSVLPSRSLQLSDVRLEDGGEYVC 187 (216)
Q Consensus 128 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~--------------------~~~~~~~~~~~~l~i~~~~~~d~g~y~C 187 (216)
..+.+|+++.|.|.....+.+.+.|+|+.... ..++.....+++|.|.+++.+|+|.|+|
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~G~Ytc 89 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDAGFYTL 89 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCCeEEEE
Confidence 37889999999998644445679999975322 1345566677899999999999999999
Q ss_pred EEEcCCc-ceEEEEEEEEEec
Q psy573 188 EAENAVG-KISASATLTVQSK 207 (216)
Q Consensus 188 ~~~n~~~-~~~~~~~l~v~~~ 207 (216)
.+.+..+ ....++.|.|..+
T Consensus 90 ~v~~~~~~~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 90 HVIKSDLVNEEATGQFRVYPE 110 (111)
T ss_dssp EEEETTSCCEEEEEEEEEECC
T ss_pred EEEeCCCcEEEEEEEEEEecC
Confidence 9999876 4777888887653
No 417
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.37 E-value=5.1e-12 Score=85.98 Aligned_cols=89 Identities=13% Similarity=0.173 Sum_probs=58.1
Q ss_pred hhhceeeEEeec--cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe---cCcEEEEccc
Q psy573 13 EEKKKLKIEMLR--EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV---DGTNLAIQDS 87 (216)
Q Consensus 13 ~~~~~l~v~~~~--~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~ 87 (216)
+..+.|.|...+ |.+...+ ...+.+|+.++|.|.+ .+. .+.+.|++++..+........... ....|.|.++
T Consensus 88 s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~-~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v 164 (198)
T 1ugn_A 88 SDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDS-QVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPV 164 (198)
T ss_dssp CCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEEC-SSC-CSEEEEEEC------CEEEC------CCEEEEEECCC
T ss_pred CccEEEEEcccccCCccccCC-ccccCCCCcEEEEEec-CCC-CcEEEEEECCCccCCccccccccCCCcceeEEEeccc
Confidence 456777776632 3333333 3678899999999998 555 679999999887632111100111 1368999999
Q ss_pred CCCCCceEEEEEEcCCC
Q psy573 88 RKTDDGRYQCVVKNVAG 104 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~ 104 (216)
+.+|+|.|+|.+.|..+
T Consensus 165 ~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 165 SPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CTTSCEEEEEEEECTTS
T ss_pred CcccCeEEEEEEEeCCC
Confidence 99999999999998764
No 418
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=9.8e-13 Score=82.00 Aligned_cols=78 Identities=26% Similarity=0.405 Sum_probs=59.6
Q ss_pred CcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEe-----cCcEEEEcccCCCCCceEEEEEEcCCCCcccceeEEE
Q psy573 40 DTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLV-----DGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLR 114 (216)
Q Consensus 40 ~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~ 114 (216)
+...|.|.+ .+.|.+.+.|++++..+........... .++.|.|.++..+|+|.|.|.+.|..|.. ...+.|.
T Consensus 21 ~~~~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~-~~~~~l~ 98 (118)
T 1wwc_A 21 LEHCIEFVV-RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTA-NQTINGH 98 (118)
T ss_dssp CEEEEEEEE-ECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEE-EEEEEEC
T ss_pred cceEEEEEe-eeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeE-eeEEEEE
Confidence 667899998 7889999999999998854433333222 24579999999999999999999988765 4456666
Q ss_pred Eeecc
Q psy573 115 VLVKP 119 (216)
Q Consensus 115 v~~~p 119 (216)
|...|
T Consensus 99 v~~~P 103 (118)
T 1wwc_A 99 FLKEP 103 (118)
T ss_dssp CSCCC
T ss_pred EccCC
Confidence 66555
No 419
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.36 E-value=8.4e-12 Score=85.57 Aligned_cols=86 Identities=27% Similarity=0.529 Sum_probs=66.4
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecC--cEEEEcccCCCCCceEEEEEEcCCCCcc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDG--TNLAIQDSRKTDDGRYQCVVKNVAGTRE 107 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 107 (216)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+............+ ..|.|.+++.+|+|.|+|.+.|..|..
T Consensus 123 ~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~- 200 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSE- 200 (212)
T ss_dssp CCSEEEEETTCCEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEE-
T ss_pred CCCcEEEccCCeEEEEEEE-cCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcE-
Confidence 4556789999999999998 788999999999999885443333332222 389999999999999999999988764
Q ss_pred cceeEEEEee
Q psy573 108 STDAVLRVLV 117 (216)
Q Consensus 108 ~~~~~l~v~~ 117 (216)
...+.|.|..
T Consensus 201 ~~~~~l~V~~ 210 (212)
T 2r15_A 201 TSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEc
Confidence 4455666553
No 420
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.36 E-value=4.9e-12 Score=96.47 Aligned_cols=93 Identities=29% Similarity=0.539 Sum_probs=72.9
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC-CC----CCeeeecCCeEEEecCCCCCCeEEEEEEEcC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM-PE----DRMSVLPSRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~-~~----~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
+|.+...+....+.+|+.+.|.|.+ +.|.|.+.|+++++.+ .. .+.....+++|.|.+++.+|+|.|+|.|.|.
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 419 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNS 419 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECS
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcC
Confidence 4666677788899999999999999 5688999999965433 11 2444556788999999999999999999999
Q ss_pred CcceEEEEEEEEEecceee
Q psy573 193 VGKISASATLTVQSKYLKV 211 (216)
Q Consensus 193 ~~~~~~~~~l~v~~~p~~~ 211 (216)
.|..+.++.+.|.+.|...
T Consensus 420 ~G~~~~~~~~~v~~~~~~~ 438 (440)
T 3zyj_A 420 VGNTTASATLNVTGTHHHH 438 (440)
T ss_dssp SCEEEEEEEEEEC------
T ss_pred CCcEEEEEEEEEecccccc
Confidence 9999999999999877543
No 421
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.35 E-value=5.8e-12 Score=83.46 Aligned_cols=94 Identities=18% Similarity=0.296 Sum_probs=68.8
Q ss_pred hhhceeeEEeeccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCC
Q psy573 13 EEKKKLKIEMLREEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDD 92 (216)
Q Consensus 13 ~~~~~l~v~~~~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 92 (216)
+..+.|.|.. +.....+....+.+|+.+.|.|.+..+.|.+.+.|++++..+.. ...+..|.|.+++.+|+
T Consensus 76 s~~~~l~v~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-------~~~~~~L~i~~v~~~d~ 146 (170)
T 3ry4_A 76 SDPVHLTVLF--EWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-------SHLDPTFSIPQANHSHS 146 (170)
T ss_dssp CCCEEEEEEC--CSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-------ESSCCEEEESSCCGGGC
T ss_pred eEeEEEEEEC--CceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-------cCCCCeEEEEeccccCC
Confidence 3445555554 33444555677899999999999744556689999999987732 22356799999999999
Q ss_pred ceEEEEEEcCCCCcccceeEEEE
Q psy573 93 GRYQCVVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 93 g~y~C~~~~~~~~~~~~~~~l~v 115 (216)
|.|+|.+.|..+...+..+.|.|
T Consensus 147 G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 147 GDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEEEeCcCccccccEEEEE
Confidence 99999999987754455555554
No 422
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.35 E-value=1.2e-11 Score=75.83 Aligned_cols=76 Identities=17% Similarity=0.241 Sum_probs=55.4
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eec-------cccCceEEEec---CcEEEEcccCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PID-------FENSKRLRLVD---GTNLAIQDSRKTD 91 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~-------~~~~~~~~~~~---~~~l~i~~~~~~d 91 (216)
+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. . .+. .....++.... ..+|.|.+++.+|
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRA-SKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPED 82 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTC
T ss_pred eeccCCeeEEcCCCCEEEEeEE-CCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHH
Confidence 4456677889999999999998 66677899999853 1 111 01123444332 2479999999999
Q ss_pred CceEEEEEEcCC
Q psy573 92 DGRYQCVVKNVA 103 (216)
Q Consensus 92 ~g~y~C~~~~~~ 103 (216)
+|.|.|.+.+..
T Consensus 83 sG~Y~C~~~n~~ 94 (108)
T 1jhl_L 83 FAMYICQQHNEY 94 (108)
T ss_dssp CSEEEEEECSSS
T ss_pred CEEEEEEEccCC
Confidence 999999998764
No 423
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.35 E-value=1.7e-12 Score=89.40 Aligned_cols=105 Identities=16% Similarity=0.258 Sum_probs=69.1
Q ss_pred hceeeEEe-eccceEecccc-eEEecCCcEEEEeeCCCCC--CCCeeEEeeCCEEeccccC-c-eEE-------EecCcE
Q psy573 15 KKKLKIEM-LREEFRVQPKS-QRVAAGDTALLECGPPRGH--PEPTLVWKKNGHPIDFENS-K-RLR-------LVDGTN 81 (216)
Q Consensus 15 ~~~l~v~~-~~~~~~~~~~~-~~~~~G~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~~~-~-~~~-------~~~~~~ 81 (216)
.+.|.|.. .+|.+.+.+.. ..+.+|+.++|.|.+ .+. +.+.+.|++++..+..... . ... ....+.
T Consensus 94 ~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
T 2x1w_L 94 MYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTA-RTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLST 172 (213)
T ss_dssp CEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEE-EECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEE
T ss_pred EEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEE-ECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEE
Confidence 35555533 23555565554 489999999999998 543 3458999998875421110 0 000 111246
Q ss_pred EEEcccCCCCCceEEEEEEcCCCCcccceeEEEEeecceE
Q psy573 82 LAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVLVKPYI 121 (216)
Q Consensus 82 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 121 (216)
|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|..+|.+
T Consensus 173 L~I~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 173 LTIDGVTRSDQGLYTCAASSGLMTK-KNSTFVRVHEDPIE 211 (213)
T ss_dssp EEESSCCGGGCEEEEEEEECSSCEE-EEEEEEEEEC----
T ss_pred EEECCCCcccCEEEEEEEecCCCcE-EEEEEEEEeccccc
Confidence 9999999999999999999988765 56778888776654
No 424
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.34 E-value=4.4e-12 Score=88.08 Aligned_cols=83 Identities=27% Similarity=0.484 Sum_probs=68.8
Q ss_pred CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-----eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 126 KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-----MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-----~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ........|.|.++..+|+|.|+|.+.|..+.....+
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 56688999999999999999999999999998775321 1222345799999999999999999999999988888
Q ss_pred EEEEEecc
Q psy573 201 TLTVQSKY 208 (216)
Q Consensus 201 ~l~v~~~p 208 (216)
.|.|...+
T Consensus 107 ~l~V~~~~ 114 (231)
T 3ojm_B 107 HLDVVERS 114 (231)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 88887643
No 425
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.34 E-value=4.6e-12 Score=86.55 Aligned_cols=86 Identities=15% Similarity=0.276 Sum_probs=66.4
Q ss_pred ceeEeCCCcEEEEEE---eCCCCCcEEEEeeCCccCCCC------------------Ceee---ecCCeEEEecCCCCCC
Q psy573 127 DTTVSAGSIIVFECS---VGGDAVLTVHWKRLGSAMPED------------------RMSV---LPSRSLQLSDVRLEDG 182 (216)
Q Consensus 127 ~~~~~~g~~~~l~C~---~~~~p~~~i~W~~~~~~~~~~------------------~~~~---~~~~~l~i~~~~~~d~ 182 (216)
..++..|+.+.|.|. +.+.|.+.+.|+|++...... .... .....|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 357889999999996 567789999999987543210 0111 1124699999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 183 GEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 183 g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~ 111 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSV 111 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeee
Confidence 999999999999999999999988776543
No 426
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.34 E-value=1.3e-11 Score=76.70 Aligned_cols=86 Identities=22% Similarity=0.461 Sum_probs=63.8
Q ss_pred CCceeEeCCCcEEEEEEeCC--CCCcEEEEeeCCccCC--------------CCCeeeecCCeEEEecCCCCCCeEEEEE
Q psy573 125 PKDTTVSAGSIIVFECSVGG--DAVLTVHWKRLGSAMP--------------EDRMSVLPSRSLQLSDVRLEDGGEYVCE 188 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~--~p~~~i~W~~~~~~~~--------------~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 188 (216)
+....+..|+++.|.|...+ .+...+.|++++..+. ..+.....+..|.|.+++.+|+|.|.|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~ 89 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFCI 89 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEEEE
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEEEE
Confidence 45578889999999999876 3345699999754221 1234333456899999999999999999
Q ss_pred EEc-CCcceEEEEEEEEEeccee
Q psy573 189 AEN-AVGKISASATLTVQSKYLK 210 (216)
Q Consensus 189 ~~n-~~~~~~~~~~l~v~~~p~~ 210 (216)
+.+ ..|.....+.|.|..+|.+
T Consensus 90 v~~~~~g~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 90 YHTYPDGTYTGRIFLEVLESSVA 112 (117)
T ss_dssp EEEETTCCEEEEEEEEEECC---
T ss_pred EEECCCCCeEEEEEEEEEccCcc
Confidence 764 5688888999999988854
No 427
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.34 E-value=4.3e-12 Score=78.90 Aligned_cols=88 Identities=33% Similarity=0.547 Sum_probs=58.3
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCC----eeEEeeCCEEec-----------cccCceEEEec--------CcEEEEccc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEP----TLVWKKNGHPID-----------FENSKRLRLVD--------GTNLAIQDS 87 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~----~~~W~~~~~~~~-----------~~~~~~~~~~~--------~~~l~i~~~ 87 (216)
|..+.+.+|++++|.|.+..+.+.+ .+.|++++.... .....+..... +.+|.|.++
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 4447889999999999873333333 499999743210 01134444443 458999999
Q ss_pred CCCCCceEEEEEEc-CCCCcccceeEEEEeecc
Q psy573 88 RKTDDGRYQCVVKN-VAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 88 ~~~d~g~y~C~~~~-~~~~~~~~~~~l~v~~~p 119 (216)
+.+|+|.|.|.+.+ ..+. ....+.|.|..+|
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~-~~~~~~L~V~~~P 118 (118)
T 3udw_C 87 RVEDEGNYTCLFVTFPQGS-RSVDIWLRVLAKP 118 (118)
T ss_dssp CGGGCEEEEEEEEEETTEE-EEEEEEEEEEC--
T ss_pred ChHHCeEEEEEEEECCCCC-ccceEEEEEEeCC
Confidence 99999999999988 4443 3455677776544
No 428
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.33 E-value=2.3e-11 Score=98.40 Aligned_cols=167 Identities=16% Similarity=0.220 Sum_probs=112.6
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeE-Ee--eCCEEeccccCceEEEec---CcEEEEcccCCCCCceEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLV-WK--KNGHPIDFENSKRLRLVD---GTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~-W~--~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C 97 (216)
+|.+. .+....+.+|+.+.|.|.+ .+.|.+.+. |+ +++..+.... ...... .++|.|.++...|+|.|+|
T Consensus 165 ~p~~~-~~~~~~v~~G~~v~l~C~~-~g~P~p~i~~W~~~~~g~~l~~~~--~~~~~~~~~~~~l~I~~~~~~d~g~Y~c 240 (731)
T 2v5y_A 165 TPHFL-RIQNVEVNAGQFATFQCSA-IGRTVAGDRLWLQGIDVRDAPLKE--IKVTSSRRFIASFNVVNTTKRDAGKYRC 240 (731)
T ss_dssp SCEEC-CCCCEEEETTSCEEEEEEE-ESCCCTTCEEEEEESSSCCEEEEE--EEECCSSEEEEEEEECSCCTTTCEEEEE
T ss_pred ccccc-cccceEEeCCCcEEEEEEe-CCCCCCceeEEEecCCCccccccc--eEEeccccceEEEEEcccccccCeEEEE
Confidence 34454 6667899999999999998 788888887 88 6776653221 111111 2579999999999999999
Q ss_pred EEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCC----CCc--EEEEeeCCccCCCCCeeeecCCe
Q psy573 98 VVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGD----AVL--TVHWKRLGSAMPEDRMSVLPSRS 171 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~--~i~W~~~~~~~~~~~~~~~~~~~ 171 (216)
.+.|..|...+....|.|..+|.....+.. .......+.|.|..... +.. .+.|...+... ..........
T Consensus 241 ~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~-~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~ 317 (731)
T 2v5y_A 241 MIRTEGGVGISNYAELVVKEPPVPIAPPQL-ASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSW--NDRQPVDSTS 317 (731)
T ss_dssp EEEETTEEEECCCEEEEEECCCCBSSCCEE-EEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSC--EEEEECCSSE
T ss_pred EEECCCCCcceeeEEEEEecCCCCCCCcce-eccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCc--eEEeccCcce
Confidence 999988863455567888777754433332 22345678888876322 222 46666543221 1112224467
Q ss_pred EEEecCCCCCCeEEEEEEE--cCCcceE
Q psy573 172 LQLSDVRLEDGGEYVCEAE--NAVGKIS 197 (216)
Q Consensus 172 l~i~~~~~~d~g~y~C~~~--n~~~~~~ 197 (216)
+.|.++.+.+...|.|.+. |..|...
T Consensus 318 ~~i~~L~p~t~Y~~~V~A~~~N~~G~s~ 345 (731)
T 2v5y_A 318 YKIGHLDPDTEYEISVLLTRPGEGGTGS 345 (731)
T ss_dssp EEECSCCTTCEEEEEEEEECSSTTCSCC
T ss_pred EEEeCCCCCCEEEEEEEEEecCCCcccc
Confidence 8999999888888888888 8888644
No 429
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.33 E-value=3.1e-11 Score=82.28 Aligned_cols=82 Identities=17% Similarity=0.274 Sum_probs=67.8
Q ss_pred eeEeCCCcEEEEEEeCCCCCc--EEEEeeCCccCCCCCee-eecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy573 128 TTVSAGSIIVFECSVGGDAVL--TVHWKRLGSAMPEDRMS-VLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASATLTV 204 (216)
Q Consensus 128 ~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v 204 (216)
..+..|+++.|.|.+ +.|.| .|.|.+.+..+ .+.. ......|.|.+++.+|.|.|.|.+.|..+.....+.|.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV 93 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 93 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEE
Confidence 588899999999999 88877 99999976554 2222 223467999999999999999999999988888999999
Q ss_pred Eecceeee
Q psy573 205 QSKYLKVI 212 (216)
Q Consensus 205 ~~~p~~~~ 212 (216)
..+|....
T Consensus 94 ~~~P~~~~ 101 (210)
T 1gsm_A 94 YAFPNQLT 101 (210)
T ss_dssp EBCCSEEE
T ss_pred EecCCCcE
Confidence 98886443
No 430
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.33 E-value=4e-12 Score=97.93 Aligned_cols=82 Identities=29% Similarity=0.542 Sum_probs=69.1
Q ss_pred CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC----CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE----DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~----~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .+.....+++|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 471 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 471 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTEEEEEEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCCcEEEEE
Confidence 4566889999999999999999999999999877642 334444567899999999999999999999999998888
Q ss_pred EEEEEe
Q psy573 201 TLTVQS 206 (216)
Q Consensus 201 ~l~v~~ 206 (216)
.|.|.+
T Consensus 472 ~l~V~~ 477 (477)
T 2id5_A 472 HLHVRS 477 (477)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 888763
No 431
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.32 E-value=6.3e-12 Score=85.35 Aligned_cols=87 Identities=20% Similarity=0.260 Sum_probs=66.7
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeee---ecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSV---LPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
+|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|+|++..+....... .....|.|.+++.+|+|.|+|.+.|..|
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVG 82 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCc
Confidence 4556555555 7889999999999987 678999999998765422111 2346799999999999999999999987
Q ss_pred c--eEEEEEEEEEe
Q psy573 195 K--ISASATLTVQS 206 (216)
Q Consensus 195 ~--~~~~~~l~v~~ 206 (216)
. .+..+.|.|..
T Consensus 83 ~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 83 WSQPSDPLELVMTG 96 (196)
T ss_dssp EBCCCCCEEEEEEC
T ss_pred ccCCCccEEEEecC
Confidence 2 45566777764
No 432
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.32 E-value=4.1e-11 Score=80.01 Aligned_cols=158 Identities=20% Similarity=0.226 Sum_probs=98.9
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCe-eEEeeCCEEeccccCceEEEecC-cEEEEcccCCCCCceEEEEEEcC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPT-LVWKKNGHPIDFENSKRLRLVDG-TNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
..+.+.|+...+..|+++.|+|.+ . -+.+. +.|-..-... ......+ ..|.|.+++ |+|.|.|.+.-.
T Consensus 3 f~v~v~P~~~~V~~G~S~~l~Cs~-~-c~~p~~~glet~l~~~------~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~ 72 (192)
T 1zxq_A 3 FEVHVRPKKLAVEPKGSLEVNCST-T-CNQPEVGGLETSLNKI------LLDEQAQWKHYLVSNIS--HDTVLQCHFTCS 72 (192)
T ss_dssp CCEEEESSEEEECTTEEEEEEEEE-S-CSSCSEEEEECSSEEE------EEEEETTEEEEEEEEEC--SCEEEEEEEEET
T ss_pred cEEEEeCCCcEEeCCCcEEEEEEC-C-CCCccccccccccCce------EEcCCCCeEEEEEeccc--cCCeeEEEEECC
Confidence 356677888889999999999997 3 34433 4453321111 0111112 369999998 788999999864
Q ss_pred CCCcccceeEEEEeecceE-EeCCCceeEeCCCcEEEEEEeCC-CCCc--EEEEeeCCccCCCCCee----eecCCeE-E
Q psy573 103 AGTRESTDAVLRVLVKPYI-IRGPKDTTVSAGSIIVFECSVGG-DAVL--TVHWKRLGSAMPEDRMS----VLPSRSL-Q 173 (216)
Q Consensus 103 ~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~-~p~~--~i~W~~~~~~~~~~~~~----~~~~~~l-~ 173 (216)
.. .....+.+.|+.+|.. .+.+....+.+|+.++|.|.+.+ .|.. ++.|++++..+...... .....++ .
T Consensus 73 ~~-~~~~~~~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~ 151 (192)
T 1zxq_A 73 GK-QESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATF 151 (192)
T ss_dssp TE-EEEEEEEEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEE
T ss_pred Cc-ceEEEEEEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEE
Confidence 33 3356788888887743 22222346889999999999964 5644 48999988765321100 0011122 2
Q ss_pred EecCCCCCCe-EEEEEEEcCC
Q psy573 174 LSDVRLEDGG-EYVCEAENAV 193 (216)
Q Consensus 174 i~~~~~~d~g-~y~C~~~n~~ 193 (216)
...+..+|.| .|+|.|.-..
T Consensus 152 ~~~~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 152 NSTADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp EEECCGGGGGCEEEEEEEEEC
T ss_pred EEecchhhCCceEEEEEEecC
Confidence 2345566666 9999998665
No 433
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.32 E-value=2.9e-12 Score=87.89 Aligned_cols=79 Identities=25% Similarity=0.383 Sum_probs=60.7
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCC-CCCeeEEeeCCEEeccccCceEEEec-CcEEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGH-PEPTLVWKKNGHPIDFENSKRLRLVD-GTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.|...+ ...+.+|+.+.|.|.+ .+. |.+.+.|++++..+.... ++.... ...|.|.++..+|+|.|+|.+.|
T Consensus 117 ~P~~~~~~-~~~v~~g~~v~l~C~v-~g~~P~p~i~W~k~g~~l~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 192 (207)
T 3rbs_A 117 GPHFVEYL-SWEVTGECNVLLKCKV-ANIKKETHIVWYKDEREISVDE--KHDFKDGICTLLITEFSKKDAGIYEVILKD 192 (207)
T ss_dssp SSEEEEEE-EEEEETTTEEEEEEEE-ESCCTTCEEEEEETTEEECCCC--CCCCSSEEEEEEETTCCGGGCEEEEEEEEE
T ss_pred CCceEecC-CcEEcCCCcEEEEEEE-eCCCCCCEEEEEECCEECCCCC--ceEcCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 34444433 4678999999999998 676 899999999999885422 222221 23699999999999999999999
Q ss_pred CCCCc
Q psy573 102 VAGTR 106 (216)
Q Consensus 102 ~~~~~ 106 (216)
..|..
T Consensus 193 ~~G~~ 197 (207)
T 3rbs_A 193 DRGKD 197 (207)
T ss_dssp TTEEE
T ss_pred CCCEE
Confidence 88765
No 434
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.31 E-value=8.1e-12 Score=79.40 Aligned_cols=96 Identities=18% Similarity=0.229 Sum_probs=62.1
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEe--ccccCceEEEec---CcEEEEcccCCCCCceEEE
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPI--DFENSKRLRLVD---GTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~--~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C 97 (216)
..+...|....+.+|++++|.|.+ .+. +.+.||++ +... ......++.... ...|.|.+++.+|+|.|+|
T Consensus 18 ~~v~q~p~~~~v~~G~~v~L~C~~-~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C 94 (133)
T 3khq_A 18 SQIWQHPRFAAKKRSSMVKFHCYT-NHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFC 94 (133)
T ss_dssp CSEEEECSEEEECTTCCEEEEEEE-SSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CceEEcCceEEEeCCCeEEEEEEe-CCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEE
Confidence 456677888899999999999998 444 78999997 2211 112334444432 2369999999999999999
Q ss_pred EEEcCCCC---cccceeEEEEeecceEEe
Q psy573 98 VVKNVAGT---RESTDAVLRVLVKPYIIR 123 (216)
Q Consensus 98 ~~~~~~~~---~~~~~~~l~v~~~p~~~~ 123 (216)
.+.+..+. .......|.|...|.+..
T Consensus 95 ~a~n~~g~~~~~~g~gt~L~V~~~p~~~~ 123 (133)
T 3khq_A 95 KQKCDSANHNVTDSCGTELLVLGFSTLDQ 123 (133)
T ss_dssp EESSCC-------CCCEEEEEC-------
T ss_pred EEEeCCCCcceeECCCEEEEEEecccchh
Confidence 99886541 123456777777655433
No 435
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.31 E-value=3e-11 Score=82.30 Aligned_cols=86 Identities=19% Similarity=0.343 Sum_probs=65.1
Q ss_pred eCCCceeEeCCCcEEEEEEeCCCCC-----cEEEEeeC-CccCCC-CCeeeec------CCeEEEecCCCCCCeEEEEEE
Q psy573 123 RGPKDTTVSAGSIIVFECSVGGDAV-----LTVHWKRL-GSAMPE-DRMSVLP------SRSLQLSDVRLEDGGEYVCEA 189 (216)
Q Consensus 123 ~~~~~~~~~~g~~~~l~C~~~~~p~-----~~i~W~~~-~~~~~~-~~~~~~~------~~~l~i~~~~~~d~g~y~C~~ 189 (216)
..+....+.+|+.+.|.|.+.+.|. +.+.|+++ +..... .+..... ...|.|.+++.+|+|.|+|.+
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEE
Confidence 3445568889999999999988876 88999994 433322 2332222 257999999999999999999
Q ss_pred EcCCcceEEEEEEEEEecc
Q psy573 190 ENAVGKISASATLTVQSKY 208 (216)
Q Consensus 190 ~n~~~~~~~~~~l~v~~~p 208 (216)
.|..+.....+.|.|..++
T Consensus 87 ~~~~~~~~~~~~l~V~~~~ 105 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKASY 105 (202)
T ss_dssp EETTEEEEEEEEEEEEBCC
T ss_pred EeCCCcceEEEEEEecCCC
Confidence 9999988888888888753
No 436
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=99.31 E-value=4.3e-11 Score=81.49 Aligned_cols=153 Identities=11% Similarity=0.138 Sum_probs=87.2
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecccc------CceEEEec-----CcEEEEcccCCCCCce
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDFEN------SKRLRLVD-----GTNLAIQDSRKTDDGR 94 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~~~------~~~~~~~~-----~~~l~i~~~~~~d~g~ 94 (216)
|..+.+.+|+.++|.|.+ .+.....+.||+.. . .+.... .+|+.... ...|+|.+++.+|+|.
T Consensus 6 p~~~~v~~G~~vtL~C~~-s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~ 84 (200)
T 2nw2_A 6 PTEMTATEGAIVQINCTY-QTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSAS 84 (200)
T ss_dssp CSEEEEETTCCEEEEEEC-CCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCeEEEccCCCEEEEEEE-CCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCCc
Confidence 677889999999999997 44444579999842 1 111001 34444431 2379999999999999
Q ss_pred EEEEEEcC---CCCcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeee
Q psy573 95 YQCVVKNV---AGTRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSV 166 (216)
Q Consensus 95 y~C~~~~~---~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~ 166 (216)
|+|.+... ..........|.|... |.+... ....+.+.|.|.+.+..+. +. ..++. ......
T Consensus 85 Y~C~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~-----~~~~~~~tl~Cl~~gf~P~-~~-v~~~~---~~~~~~ 154 (200)
T 2nw2_A 85 YLCAVQASGGSYIPTFGRGTSLIVHPYIQNPDPAVYQL-----RDSKSSDKSVCLFTDFDSQ-TN-VSQSK---DSDVYI 154 (200)
T ss_dssp EEEEEC---CCCCCEECCCEEEEEECCCSSCCCEEEEE-----EECC--CCEEEEEESCCTT-CC-CCCCS---SSSEEE
T ss_pred EEEEEEcCCcceeeeeCCCEEEEEecCcccCCCeEEEc-----CCCCCCceEEEEeecccCC-cE-eeccc---ccceEe
Confidence 99998752 1111122345666542 222211 1122378999999877544 21 01111 111111
Q ss_pred ecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 167 LPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
.....+.+......+.|.|.|.+.|..+
T Consensus 155 t~~~~l~~~~~~~~~~~~~~~~~~~~~~ 182 (200)
T 2nw2_A 155 TDKCVLDMRSMDFKSNSAVAWSNKSDFA 182 (200)
T ss_dssp CCCEEEEEGGGTEEEEEEEEEESSSSCC
T ss_pred cCchhhhhhhcccccccceeccCCCceE
Confidence 2233455556666677889998776554
No 437
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.30 E-value=3.4e-12 Score=73.20 Aligned_cols=61 Identities=25% Similarity=0.460 Sum_probs=49.5
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEccc-CCCCCceEEEEEEc
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDS-RKTDDGRYQCVVKN 101 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~~ 101 (216)
.|+...+..|++++|.|.+ .+.| .+.|+|++..+... .++.|.|.++ ..+|+|.|+|.+..
T Consensus 5 ~p~~~v~~~G~~v~L~C~~-~g~P--~i~W~kdg~~l~~~--------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 5 NIEYKVSISGTSVELTCPL-DSDE--NLKWEKNGQELPQK--------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCCEEEEETTEEEEECSS-CCCS--SCEEEETTEECTTC--------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CCceeEEEcCCeEEEEEEC-CCCC--cEEEEECCEECcCC--------CCCEEEECccCccCcCEEEEEEEcc
Confidence 3556778899999999998 6666 39999999988432 3567999996 78999999999865
No 438
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.30 E-value=1.9e-11 Score=82.23 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=64.5
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcc-
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGK- 195 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~- 195 (216)
.+|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|+|++.. .......|.|.+++.+|+|.|+|.+.|..|.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 78 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWS 78 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC------CEESSSEEEESSCCGGGCEEEEEEEEETTEEB
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc------ccCcccEEEECcCChhhCceEEEEEEcCCCcc
Confidence 45666655554 7899999999999987 7789999999865 2345678999999999999999999998763
Q ss_pred -eEEEEEEEEEe
Q psy573 196 -ISASATLTVQS 206 (216)
Q Consensus 196 -~~~~~~l~v~~ 206 (216)
.+..+.|.|..
T Consensus 79 ~~s~~~~l~V~~ 90 (184)
T 2gi7_A 79 LPSDQLELVATG 90 (184)
T ss_dssp CCCCCEEEEEES
T ss_pred CCCCCEEEEecC
Confidence 34456677754
No 439
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.29 E-value=1e-11 Score=85.82 Aligned_cols=101 Identities=15% Similarity=0.117 Sum_probs=68.9
Q ss_pred hhhceeeEEee--ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCC
Q psy573 13 EEKKKLKIEML--REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKT 90 (216)
Q Consensus 13 ~~~~~l~v~~~--~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 90 (216)
+..+.|.|... +|.+...+ ...+.+|+.++|.|.. .+.+.+.+.|+|+|..+.. .......++.|.|.+++.+
T Consensus 93 s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~---~~~~~~~~~~L~I~~v~~~ 167 (218)
T 1uct_A 93 SDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLP---QHQSGEHPANFSLGPVDLN 167 (218)
T ss_dssp CCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCC---SEEECSSSEEEECCSCCGG
T ss_pred cCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeC-CCCCCCEEEEEECCCcccc---cccCCCccCEEEEccCCcc
Confidence 45566777652 34454455 5578999999999965 4567789999999886632 1222234568999999999
Q ss_pred CCceEEEEEEcCCC----CcccceeEEEEeec
Q psy573 91 DDGRYQCVVKNVAG----TRESTDAVLRVLVK 118 (216)
Q Consensus 91 d~g~y~C~~~~~~~----~~~~~~~~l~v~~~ 118 (216)
|+|.|+|.+.+... ...+..+.|.|...
T Consensus 168 D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 168 VSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp GCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred cCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 99999999987532 12244556666543
No 440
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.29 E-value=4.3e-11 Score=73.38 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=55.1
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eec-------cccCceEEEec---CcEEEEcccCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PID-------FENSKRLRLVD---GTNLAIQDSRKT 90 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~-------~~~~~~~~~~~---~~~l~i~~~~~~ 90 (216)
.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. . .+. .....++.... ..+|.|.+++.+
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQA-SQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPE 83 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred cEEeeCCEEEecCCCcEEEEEee-ccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChh
Confidence 45556777899999999999998 55567789999863 1 111 01133444331 347999999999
Q ss_pred CCceEEEEEEcC
Q psy573 91 DDGRYQCVVKNV 102 (216)
Q Consensus 91 d~g~y~C~~~~~ 102 (216)
|+|.|.|.+.+.
T Consensus 84 DsG~Y~C~~~~~ 95 (109)
T 2q20_A 84 DIATYYCQQYDN 95 (109)
T ss_dssp GCEEEEEEECSS
T ss_pred hCEEEEEEEeeC
Confidence 999999999864
No 441
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=7.6e-12 Score=75.79 Aligned_cols=77 Identities=26% Similarity=0.464 Sum_probs=60.5
Q ss_pred ceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC-CeeeecC---CeEEEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy573 127 DTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED-RMSVLPS---RSLQLSDVRLEDGGEYVCEAENAVGKISASATL 202 (216)
Q Consensus 127 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l 202 (216)
...+.+|+.+.|.|.+. .|.+.+.|++++..+... +...... ..|.|.++..+|+|.|+|.+.| ...++.|
T Consensus 20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~~l 94 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSFRL 94 (102)
T ss_dssp EEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT----EECCEEE
T ss_pred cEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC----CcEEEEE
Confidence 34788999999999998 888999999999887543 3333322 4799999999999999999943 4556778
Q ss_pred EEEecc
Q psy573 203 TVQSKY 208 (216)
Q Consensus 203 ~v~~~p 208 (216)
.|.++|
T Consensus 95 ~V~~p~ 100 (102)
T 2eo1_A 95 QVAGQC 100 (102)
T ss_dssp EEESCC
T ss_pred EEeCCC
Confidence 887664
No 442
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.29 E-value=7.8e-12 Score=87.95 Aligned_cols=92 Identities=18% Similarity=0.307 Sum_probs=66.0
Q ss_pred hceeeEEee--ccceEec-ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEecccc---------------------
Q psy573 15 KKKLKIEML--REEFRVQ-PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFEN--------------------- 70 (216)
Q Consensus 15 ~~~l~v~~~--~~~~~~~-~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~--------------------- 70 (216)
.+.|.|... ++.+.+. +....+.+|+.+.|.|.+ .+.|.+.+.|++++..+....
T Consensus 124 ~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (250)
T 2fbo_J 124 SVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC-TDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSE 202 (250)
T ss_dssp EEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE-ESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTT
T ss_pred eEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe-cCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCce
Confidence 455666543 3445444 335677789999999998 677888999999987663321
Q ss_pred -CceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcc
Q psy573 71 -SKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRE 107 (216)
Q Consensus 71 -~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 107 (216)
..+........|.|.+++.+|+|.|+|.+.|..|...
T Consensus 203 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g 240 (250)
T 2fbo_J 203 IAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELD 240 (250)
T ss_dssp TTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGG
T ss_pred EecccccCCccEEEEecCCcccCEEEEEEecCCccccC
Confidence 1222223457899999999999999999999776543
No 443
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.28 E-value=1e-11 Score=84.82 Aligned_cols=93 Identities=19% Similarity=0.286 Sum_probs=71.4
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccC------------C-CCCeeeecCCeEEEecCCCCCCeE
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAM------------P-EDRMSVLPSRSLQLSDVRLEDGGE 184 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~------------~-~~~~~~~~~~~l~i~~~~~~d~g~ 184 (216)
+..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ . ..+... ....|.|.++..+|+|.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF-LPTGITFKSVTREDTGT 82 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE-ETTEEECSCCCTTSCSE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe-eccEEEEeeCCHHHCcE
Confidence 345556667778999999999999998899999999987652 1 122222 33789999999999999
Q ss_pred EEEEEEcCCc--ceEEEEEEEEEecceee
Q psy573 185 YVCEAENAVG--KISASATLTVQSKYLKV 211 (216)
Q Consensus 185 y~C~~~n~~~--~~~~~~~l~v~~~p~~~ 211 (216)
|+|.+.|..| ..+..+.|.|..+|.+.
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~ 111 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKP 111 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCC
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCC
Confidence 9999999865 35567777887777543
No 444
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.28 E-value=8.9e-12 Score=85.25 Aligned_cols=76 Identities=20% Similarity=0.377 Sum_probs=57.2
Q ss_pred ecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEccc-CCCCCceEEEEEEcCCCCcccceeEEEE
Q psy573 37 AAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDS-RKTDDGRYQCVVKNVAGTRESTDAVLRV 115 (216)
Q Consensus 37 ~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~~~~~~~~~~~~~l~v 115 (216)
.+|+.++|.|. +.|.+.+.|++++..+............++.|.|.++ +.+|+|.|+|.+.|..+...+..+.|.+
T Consensus 126 ~~G~~v~L~C~---g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 126 ISGTTVILTCP---QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EETTEEEEECS---CCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ecCCcEEEEcC---CCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 49999999996 5677899999999988543222222234778999999 9999999999999988754344444543
No 445
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.28 E-value=1.2e-11 Score=83.46 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=65.7
Q ss_pred hhhceeeEEee--ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCC
Q psy573 13 EEKKKLKIEML--REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKT 90 (216)
Q Consensus 13 ~~~~~l~v~~~--~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 90 (216)
++.+.|.|... +|.+...+ ...+.+|+.++|.|.+ .+ +.+.+.|++++..+.. .......+..|.|.+++.+
T Consensus 86 s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~---~~~~~~~~~~L~I~~v~~~ 159 (188)
T 1oll_A 86 SNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSHV---QRGYGKVQAEFPLGPVTTA 159 (188)
T ss_dssp CCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEEC-SS-SCSEEEEEEESSSCEE---EEEECSSEEEEEEEECCGG
T ss_pred CCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEc-CC-CCCEEEEEECCccccc---cccCCCceeEEEECCCCcC
Confidence 45566776542 35555445 4568999999999997 33 4568999999876532 1111223468999999999
Q ss_pred CCceEEEEEEcCCC--CcccceeEEEE
Q psy573 91 DDGRYQCVVKNVAG--TRESTDAVLRV 115 (216)
Q Consensus 91 d~g~y~C~~~~~~~--~~~~~~~~l~v 115 (216)
|+|.|+|.+.+... ...+..+.|.|
T Consensus 160 d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 160 HRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp GCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred CCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 99999999987542 12244455544
No 446
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.28 E-value=3.6e-12 Score=90.24 Aligned_cols=139 Identities=14% Similarity=0.219 Sum_probs=68.8
Q ss_pred HhhhceeeEEee--ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE--ecCcEEEEccc
Q psy573 12 EEEKKKLKIEML--REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL--VDGTNLAIQDS 87 (216)
Q Consensus 12 ~~~~~~l~v~~~--~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~l~i~~~ 87 (216)
.++.+.|.|... +|.+...+. ..+.+|++++|.|.+ .+. .+.+.|+|++..+.......... ..+..|.|.++
T Consensus 93 ~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~-~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v 169 (257)
T 1b6u_A 93 PSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSS-RSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPA 169 (257)
T ss_dssp CCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEEC-SSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEEC
T ss_pred cCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeC-CCC-CcEEEEEECCcccCcccccccccCCceeEEEEeccc
Confidence 355667777654 345555554 367899999999998 443 46899999987653221111000 12457999999
Q ss_pred CCCCCceEEEEEEcCCC----CcccceeEEEEeecceEEeCCC-ceeEeCCCcEEEEEEeCCCCCcEEEEeeCC
Q psy573 88 RKTDDGRYQCVVKNVAG----TRESTDAVLRVLVKPYIIRGPK-DTTVSAGSIIVFECSVGGDAVLTVHWKRLG 156 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~~----~~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~ 156 (216)
+ |+|.|+|.+.+... ...+..+.|.|...|....++. ......|..+.|.|.+ |.+.+.+.|..-+
T Consensus 170 ~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 170 T--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp C--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC--------------------------------------
T ss_pred c--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 8 99999999986532 2235567788888776542222 2245568889999876 4556677886544
No 447
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.28 E-value=7e-12 Score=78.40 Aligned_cols=87 Identities=22% Similarity=0.210 Sum_probs=61.1
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE-Eec-----------cccCceEEEe-cCcEEEEcccCCCCCceEEEE
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH-PID-----------FENSKRLRLV-DGTNLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~-~~~-----------~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~ 98 (216)
.++.+.+|++++|.|..........+.||+... .+. ....+|..+. .+++|+|.+++.+|+|.|.|.
T Consensus 12 ~pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~c~ 91 (121)
T 2edo_A 12 VHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMR 91 (121)
T ss_dssp BCCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEEEEE
T ss_pred EEEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEEEE
Confidence 346889999999999762233456899999753 221 1223455555 567899999999999999999
Q ss_pred EEcCCCCcccceeEEEEeec
Q psy573 99 VKNVAGTRESTDAVLRVLVK 118 (216)
Q Consensus 99 ~~~~~~~~~~~~~~l~v~~~ 118 (216)
+.+..+......+.|.|..+
T Consensus 92 v~~~~~~~~~~~~~L~V~~~ 111 (121)
T 2edo_A 92 VLKKTGNEQEWKIKLQVLDP 111 (121)
T ss_dssp EEETTTEEEECCEECEEECC
T ss_pred EEcCCCcEEEEEEEEEEECC
Confidence 98765443455667777654
No 448
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.28 E-value=7.1e-12 Score=95.91 Aligned_cols=92 Identities=30% Similarity=0.545 Sum_probs=70.0
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCcc-CCC----CCeeeecCCeEEEecCCCCCCeEEEEEEEcC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSA-MPE----DRMSVLPSRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~-~~~----~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
+|.+...+....+.+|+.+.|.|.+. |.|.+.|+++++. +.. .+.....+++|.|.+++.+|+|.|+|.|.|.
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~ 429 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNV 429 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECS
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcC
Confidence 34555566777899999999999988 8999999995543 221 2444556688999999999999999999999
Q ss_pred CcceEEEEEEEEEecceee
Q psy573 193 VGKISASATLTVQSKYLKV 211 (216)
Q Consensus 193 ~~~~~~~~~l~v~~~p~~~ 211 (216)
.|....++.|.|.+.+...
T Consensus 430 ~G~~~~~~~l~v~~~~~~~ 448 (452)
T 3zyi_A 430 AGNSNASAYLNVSTAGTHH 448 (452)
T ss_dssp SCEEEEEEEEEC-------
T ss_pred CCcEEEEEEEEEEcccccC
Confidence 9999999999998776544
No 449
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.28 E-value=5.6e-11 Score=73.78 Aligned_cols=83 Identities=23% Similarity=0.394 Sum_probs=60.6
Q ss_pred CceeEeCCCcEEEEEEe-CCCCCc----EEEEeeCCccCC--------------CCCeeeec--------CCeEEEecCC
Q psy573 126 KDTTVSAGSIIVFECSV-GGDAVL----TVHWKRLGSAMP--------------EDRMSVLP--------SRSLQLSDVR 178 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~-~~~p~~----~i~W~~~~~~~~--------------~~~~~~~~--------~~~l~i~~~~ 178 (216)
....+..|+++.|.|.+ .+.+.+ .+.|++++.... ..+..... ..+|.|.+++
T Consensus 8 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 87 (118)
T 3udw_C 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR 87 (118)
T ss_dssp SEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCC
T ss_pred CeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecC
Confidence 44678899999999998 444433 499999753211 12222222 4579999999
Q ss_pred CCCCeEEEEEEEc-CCcceEEEEEEEEEecc
Q psy573 179 LEDGGEYVCEAEN-AVGKISASATLTVQSKY 208 (216)
Q Consensus 179 ~~d~g~y~C~~~n-~~~~~~~~~~l~v~~~p 208 (216)
.+|+|.|.|.+.+ ..+.....+.|.|.++|
T Consensus 88 ~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 88 VEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred hHHCeEEEEEEEECCCCCccceEEEEEEeCC
Confidence 9999999999998 77788888899988765
No 450
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.28 E-value=1.5e-11 Score=83.57 Aligned_cols=88 Identities=27% Similarity=0.438 Sum_probs=68.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVA 103 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 103 (216)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. . ......+..|.|.++..+|+|.|+|.+.|..
T Consensus 113 ~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~--~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 188 (201)
T 3s97_C 113 PADIVVQFKDVYALMGQNVTLECFA-LGNPVPDIRWRKVLEPMPS--T-AEISTSGAVLKIFNIQLEDEGIYECEAENIR 188 (201)
T ss_dssp EEEEEEECCCEEEETTCCEEEEEEE-EEESCCEEEEEETTBCCCT--T-CEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCceEecCCceEEecCCcEEEEEEc-cCCCCCceEEEeCCCcCCC--c-eeecCCCCEEEEccCChhhCEEEEEEEEecC
Confidence 4556666667889999999999998 7788899999999986632 1 2223456789999999999999999999987
Q ss_pred CCcccceeEEEEe
Q psy573 104 GTRESTDAVLRVL 116 (216)
Q Consensus 104 ~~~~~~~~~l~v~ 116 (216)
|.. ...+.|.|.
T Consensus 189 g~~-~~~~~l~V~ 200 (201)
T 3s97_C 189 GKD-KHQARIYVQ 200 (201)
T ss_dssp EEE-EEEEEEEEE
T ss_pred Cce-eeeEEEEEe
Confidence 764 445555553
No 451
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.27 E-value=3.9e-11 Score=80.55 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=62.1
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEEEEcCCCCcccce
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKNVAGTRESTD 110 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 110 (216)
+....+.+|+.++|.|.+ .+.|.+.+.|++++..+ ...+..|.|.+++.+|+|.|+|.+.+..+.. ...
T Consensus 104 ~~~~~v~~g~~~~l~C~~-~~~p~~~v~W~~~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~-~~~ 172 (184)
T 2ny1_B 104 NSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKN---------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKV-EFK 172 (184)
T ss_dssp SSCSEEETTCCEEEEEEC-CTTCCCEEEEECTTSCE---------EEESSEEEESSCCGGGCEEEEEEEEETTEEE-EEE
T ss_pred CCCceeecCCCEEEEEEc-CCCCCCEEEEEeCCCcc---------ccCceEEEEecCCcCCCeEEEEEEEECCceE-EEE
Confidence 445678999999999998 66789999999987654 2345789999999999999999999866543 456
Q ss_pred eEEEEeecc
Q psy573 111 AVLRVLVKP 119 (216)
Q Consensus 111 ~~l~v~~~p 119 (216)
+.|.|...|
T Consensus 173 ~~l~V~~~p 181 (184)
T 2ny1_B 173 IDIVVLAFQ 181 (184)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEecC
Confidence 677776554
No 452
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.27 E-value=4.5e-11 Score=70.75 Aligned_cols=84 Identities=17% Similarity=0.276 Sum_probs=60.0
Q ss_pred eEEecCCcEEEEeeCCCCCCCCeeEEeeCCE----EeccccCceEEEec-C----cEEEEcccCCCCCceEEEEEEcCCC
Q psy573 34 QRVAAGDTALLECGPPRGHPEPTLVWKKNGH----PIDFENSKRLRLVD-G----TNLAIQDSRKTDDGRYQCVVKNVAG 104 (216)
Q Consensus 34 ~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~----~~~~~~~~~~~~~~-~----~~l~i~~~~~~d~g~y~C~~~~~~~ 104 (216)
.++..|+++.|.|.+....+.|+++|.|.+. .+......+..... + ..|+|.++..+|+|.|+|.+.+..+
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g 103 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQ 103 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTE
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCC
Confidence 5789999999999985557899999999653 32111111111111 1 2699999999999999999999887
Q ss_pred CcccceeEEEEee
Q psy573 105 TRESTDAVLRVLV 117 (216)
Q Consensus 105 ~~~~~~~~l~v~~ 117 (216)
...+....+.|..
T Consensus 104 ~ieSHs~ti~V~~ 116 (122)
T 1xau_A 104 VINSHSVTIHVRE 116 (122)
T ss_dssp EEECCCEEEEEC-
T ss_pred ceeeeEEEEEEEe
Confidence 7666666666544
No 453
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.27 E-value=5.3e-11 Score=73.47 Aligned_cols=76 Identities=20% Similarity=0.406 Sum_probs=54.1
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EEec--------cccCceEEEecC------cEEEEcccCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HPID--------FENSKRLRLVDG------TNLAIQDSRKT 90 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~~~--------~~~~~~~~~~~~------~~l~i~~~~~~ 90 (216)
+...|..+.+.+|++++|.|.+ .+.+ +.+.||+.. .... .....++....+ .+|.|.+++.+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~-~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 81 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNF-TTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLE 81 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEE-SSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGG
T ss_pred eEECCCEEEEecCCcEEEEEEE-CCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChh
Confidence 4456777889999999999998 4433 689999853 1110 012334444332 27999999999
Q ss_pred CCceEEEEEEcCCC
Q psy573 91 DDGRYQCVVKNVAG 104 (216)
Q Consensus 91 d~g~y~C~~~~~~~ 104 (216)
|+|.|.|.+.+..+
T Consensus 82 DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 82 DSGTYFCAAEASSG 95 (113)
T ss_dssp GCEEEEEEEECSSS
T ss_pred hCEEEEEEEecCCC
Confidence 99999999998653
No 454
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.27 E-value=3.9e-11 Score=89.18 Aligned_cols=82 Identities=22% Similarity=0.286 Sum_probs=68.7
Q ss_pred CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCC-----CCeeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPE-----DRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISAS 199 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-----~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~ 199 (216)
+....+.+|+.+.|.|.+.+ |.|.+.|++++..+.. .+... .+++|.|.+++.+|+|.|+|.|.|..|..+..
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 330 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNETLS 330 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEEEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccEEE
Confidence 45568999999999999998 9999999997765422 13444 67789999999999999999999999999999
Q ss_pred EEEEEEecc
Q psy573 200 ATLTVQSKY 208 (216)
Q Consensus 200 ~~l~v~~~p 208 (216)
+.|.|...+
T Consensus 331 ~~l~V~~~~ 339 (361)
T 2xot_A 331 VELKVYNFT 339 (361)
T ss_dssp EEEEEESSC
T ss_pred EEEEEEeee
Confidence 999987543
No 455
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.27 E-value=3.1e-12 Score=77.97 Aligned_cols=74 Identities=22% Similarity=0.262 Sum_probs=53.4
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEE-ecCcEEEEcccCCCCCceEEEEEEcC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRL-VDGTNLAIQDSRKTDDGRYQCVVKNV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~ 102 (216)
.|.+...|.. .+.+|++|+|.|.+ ... ...+.||+++..... .+... ..+..|.|.+++.+|+|.|+|.+.+.
T Consensus 5 kP~i~~~p~~-~v~~G~~VtL~C~~-~~~-~~~~~w~k~g~~~~~---~~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 5 QPSLSLHPSQ-GVSLGDTVTLRCHL-PRM-AAWVQLWLNGTLRFD---KEKDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp CCEEEEESCS-SCCTTCEEEEEEEC-CSS-CEEEEEEETTEEEEE---EEECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred CCEEEeCCCC-CcCcCCCEEEEEEc-CCC-CcEEEEEECCcccee---eeccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 3556666655 68899999999998 333 467899999876521 11110 12347999999999999999999875
Q ss_pred C
Q psy573 103 A 103 (216)
Q Consensus 103 ~ 103 (216)
.
T Consensus 79 ~ 79 (105)
T 2vsd_A 79 E 79 (105)
T ss_dssp T
T ss_pred C
Confidence 3
No 456
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.27 E-value=4.2e-10 Score=77.03 Aligned_cols=158 Identities=20% Similarity=0.368 Sum_probs=98.6
Q ss_pred ceEEecCCcEEEEeeCCCCCC--CCeeEEeeC--CEEe---------------ccccCceEEEecC-----cEEEEcccC
Q psy573 33 SQRVAAGDTALLECGPPRGHP--EPTLVWKKN--GHPI---------------DFENSKRLRLVDG-----TNLAIQDSR 88 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~--~~~~~W~~~--~~~~---------------~~~~~~~~~~~~~-----~~l~i~~~~ 88 (216)
...+.+|+.+.|.|.+ .+.. ...+.|++. |+.+ .....+|+.+..+ ..|.+.+++
T Consensus 9 ~~lvkPG~Sl~lSC~~-SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~ 87 (254)
T 4f9p_D 9 AEVVRPGTSVKVSCKA-SGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLT 87 (254)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CceECCCCCeEEEEEE-eCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCC
Confidence 3468899999999987 4432 235788873 2221 1123345554422 249999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEeec---------------------ceEEeCCCceeEeCCCcEEEEEEeCCCCC
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVLVK---------------------PYIIRGPKDTTVSAGSIIVFECSVGGDAV 147 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~---------------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 147 (216)
.+|.+.|+|.-... ....-....+.|..+ ..+...|..+.+.+|+.+.|.|.+...-.
T Consensus 88 ~eDTAvYYCAr~~~-~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~~ 166 (254)
T 4f9p_D 88 SDDSAVYFCARSDY-GAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSIS 166 (254)
T ss_dssp GGGCEEEECEESSS-CCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCCT
T ss_pred CCCCEEEEEEecCC-CCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCccc
Confidence 99999999975322 111222334444321 12344566678899999999999865544
Q ss_pred cEEEEeeC--CccCC-------------CCCeeeec---CCeEEEecCCCCCCeEEEEEEEcC
Q psy573 148 LTVHWKRL--GSAMP-------------EDRMSVLP---SRSLQLSDVRLEDGGEYVCEAENA 192 (216)
Q Consensus 148 ~~i~W~~~--~~~~~-------------~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~ 192 (216)
..+.|++. ++.+. .+++.... +.+|.|..++.+|.+.|.|...+.
T Consensus 167 ~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~YYC~q~~~ 229 (254)
T 4f9p_D 167 NNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIYFCQQSNS 229 (254)
T ss_dssp TCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEEEEEECSS
T ss_pred CCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEEEEeecCC
Confidence 45889863 22110 12333322 236999999999999999977654
No 457
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.27 E-value=1.5e-10 Score=74.18 Aligned_cols=85 Identities=20% Similarity=0.346 Sum_probs=62.8
Q ss_pred CCCceeEeCCCcEEEEEEeCCCC---CcEEEEeeCCcc--C----------------CCCCeeeec------CCeEEEec
Q psy573 124 GPKDTTVSAGSIIVFECSVGGDA---VLTVHWKRLGSA--M----------------PEDRMSVLP------SRSLQLSD 176 (216)
Q Consensus 124 ~~~~~~~~~g~~~~l~C~~~~~p---~~~i~W~~~~~~--~----------------~~~~~~~~~------~~~l~i~~ 176 (216)
.+....+..|+++.|.|.+.+.+ .+.+.|++++.. + ...+..... ...|.|.+
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 34567889999999999986543 368999997631 0 012322222 24699999
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy573 177 VRLEDGGEYVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 177 ~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
++.+|+|.|.|.+.+..+.....+.|.|.+++
T Consensus 92 v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P~ 123 (139)
T 1pko_A 92 VRFSDEGGYTCFFRDHSYQEEAAVELKVEDPF 123 (139)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred CCHHHCEEEEEEEEcCCCceEEEEEEEEecCc
Confidence 99999999999999998888888999998544
No 458
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.27 E-value=2.1e-11 Score=82.81 Aligned_cols=88 Identities=19% Similarity=0.260 Sum_probs=66.1
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCe---eeecCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRM---SVLPSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
.+|.+...+. ..+.+|+++.|.|.+.+.|. .+.|+|++..+..... .......|.|.++..+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 4566665555 37889999999999987765 9999999987643211 11234679999999999999999999987
Q ss_pred cc--eEEEEEEEEEe
Q psy573 194 GK--ISASATLTVQS 206 (216)
Q Consensus 194 ~~--~~~~~~l~v~~ 206 (216)
|. .+..+.|.|..
T Consensus 82 g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 82 GWSEPSDPLELVVTG 96 (196)
T ss_dssp EECBCCCCEEEEEEC
T ss_pred CcCCcCccEEEEecC
Confidence 64 24557777776
No 459
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.27 E-value=2.4e-11 Score=76.31 Aligned_cols=82 Identities=18% Similarity=0.342 Sum_probs=61.4
Q ss_pred CCceeEeCCCcEEEEEEeCCCCC----cEEEEeeCCcc-------C---------------CCCCeeeecC------CeE
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAV----LTVHWKRLGSA-------M---------------PEDRMSVLPS------RSL 172 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~----~~i~W~~~~~~-------~---------------~~~~~~~~~~------~~l 172 (216)
+....+.+|+++.|.|.+.+.+. +.+.|++++.. + ...+...... .+|
T Consensus 12 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL 91 (126)
T 1eaj_A 12 EEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASI 91 (126)
T ss_dssp EEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCE
T ss_pred CceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEE
Confidence 34567889999999999866543 45999986521 0 1123333222 579
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGKISASATLTVQS 206 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~ 206 (216)
.|.+++.+|+|.|.|.+.|..+.....+.|.|..
T Consensus 92 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 92 NVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 9999999999999999999988888888888864
No 460
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.26 E-value=2.5e-11 Score=81.05 Aligned_cols=80 Identities=16% Similarity=0.252 Sum_probs=62.5
Q ss_pred eeEeCCCcEEEEEEeCC--CCCcEEEEeeCCccC-----------CCCCeeeecCCeEEEecCCCCCCeEEEEEEEcCCc
Q psy573 128 TTVSAGSIIVFECSVGG--DAVLTVHWKRLGSAM-----------PEDRMSVLPSRSLQLSDVRLEDGGEYVCEAENAVG 194 (216)
Q Consensus 128 ~~~~~g~~~~l~C~~~~--~p~~~i~W~~~~~~~-----------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~ 194 (216)
..+.+|+.+.|.|...+ .+.+.|.|+|++..+ ...+.....++.|.|.+++.+|+|.|+|.+.|..|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g 85 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNG 85 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTC
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCC
Confidence 45778999999995433 556789999998532 23345555667799999999999999999999999
Q ss_pred ce--EEEEEEEEEec
Q psy573 195 KI--SASATLTVQSK 207 (216)
Q Consensus 195 ~~--~~~~~l~v~~~ 207 (216)
.. ...+.|.|..+
T Consensus 86 ~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 86 TRILNKALDLRILEM 100 (176)
T ss_dssp CEEEEEEEEEEEECC
T ss_pred CEEEEEEEEEEEeCC
Confidence 86 66778888764
No 461
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.26 E-value=1.7e-11 Score=77.02 Aligned_cols=85 Identities=26% Similarity=0.392 Sum_probs=58.7
Q ss_pred cccceEEecCCcEEEEeeCCCCCCC----CeeEEeeCC-------EEe------------ccccCceEEEecC------c
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPE----PTLVWKKNG-------HPI------------DFENSKRLRLVDG------T 80 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~----~~~~W~~~~-------~~~------------~~~~~~~~~~~~~------~ 80 (216)
.+..+.+.+|++++|.|.+ .+.+. +.+.|++.+ ..+ ......+.....+ .
T Consensus 11 ~~~~v~~~~G~~v~L~C~~-~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 89 (126)
T 1eaj_A 11 PEEMIEKAKGETAYLPCKF-TLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDA 89 (126)
T ss_dssp SEEEEEEETTSCEEECCBE-ECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBC
T ss_pred CCceEEEEeCCCEEEEEEE-ecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeE
Confidence 4456789999999999987 33332 459999864 222 1122345555443 6
Q ss_pred EEEEcccCCCCCceEEEEEEcCCCCcccceeEEEEe
Q psy573 81 NLAIQDSRKTDDGRYQCVVKNVAGTRESTDAVLRVL 116 (216)
Q Consensus 81 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~ 116 (216)
+|.|.+++.+|+|.|.|.+.+..+.. ...+.|.|.
T Consensus 90 sL~I~~v~~~D~G~Y~C~v~~~~~~~-~~~~~L~V~ 124 (126)
T 1eaj_A 90 SINVTNLQLSDIGTYQCKVKKAPGVA-NKKIHLVVL 124 (126)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred EEEECcCChHHCeEEEEEEEcCCccC-CcEEEEEEE
Confidence 79999999999999999999865532 445566554
No 462
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.25 E-value=3.1e-12 Score=73.37 Aligned_cols=60 Identities=25% Similarity=0.585 Sum_probs=50.3
Q ss_pred CCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeeecCCeEEEecC-CCCCCeEEEEEEEc
Q psy573 125 PKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVLPSRSLQLSDV-RLEDGGEYVCEAEN 191 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n 191 (216)
+....+..|+++.|.|.+.+.|. |.|+|++..++.. .+++|.|.++ ..+|+|.|+|.+.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~-----~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC-----CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC-----CCCEEEECccCccCcCEEEEEEEcc
Confidence 45567778999999999998884 9999999887644 4568999996 78999999999865
No 463
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.25 E-value=8.6e-11 Score=73.30 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=60.3
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc-------ccCceEEEe---cCcEEEEcccCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF-------ENSKRLRLV---DGTNLAIQDSRKTD 91 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~-------~~~~~~~~~---~~~~l~i~~~~~~d 91 (216)
+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. . .+.. ....++... ...+|.|.+++.+|
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 82 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRA-SENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPED 82 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEecCCeEEEcCCCcEEEEEEe-CCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHH
Confidence 4456777889999999999998 55567789999953 2 1110 113344443 23479999999999
Q ss_pred CceEEEEEEcCC-CCcccceeEEEEee
Q psy573 92 DGRYQCVVKNVA-GTRESTDAVLRVLV 117 (216)
Q Consensus 92 ~g~y~C~~~~~~-~~~~~~~~~l~v~~ 117 (216)
+|.|.|.+.+.. .........|.|..
T Consensus 83 sG~Y~C~~~~~~~~~~fg~gt~L~V~~ 109 (120)
T 1mqk_L 83 FGSYYCQHHYGTPPLTFGGGTKLEIKR 109 (120)
T ss_dssp CEEEEEEECSSSSSCCBCCCEEEEEC-
T ss_pred CEEEEEEEEeCCCceEECCCeEEEEec
Confidence 999999998754 22223344555543
No 464
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.24 E-value=9.8e-11 Score=71.65 Aligned_cols=75 Identities=19% Similarity=0.328 Sum_probs=53.8
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC-----EEecc-------ccCceEEEec---CcEEEEcccCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG-----HPIDF-------ENSKRLRLVD---GTNLAIQDSRKTD 91 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~-----~~~~~-------~~~~~~~~~~---~~~l~i~~~~~~d 91 (216)
+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. ..+.. ....++.... ..+|.|.+++.+|
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKA-SETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAED 82 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEE-SSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTC
T ss_pred EEEeCCeEEEcCCCCEEEEeee-CCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhh
Confidence 4455677889999999999998 55556789999853 11210 1123444332 2379999999999
Q ss_pred CceEEEEEEcC
Q psy573 92 DGRYQCVVKNV 102 (216)
Q Consensus 92 ~g~y~C~~~~~ 102 (216)
+|.|.|.+.+.
T Consensus 83 sG~Y~C~~~~~ 93 (108)
T 1qfw_M 83 FADYHCGQTYN 93 (108)
T ss_dssp CSEEEEEECSS
T ss_pred CEEEEEEEccC
Confidence 99999999865
No 465
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=99.24 E-value=1.4e-11 Score=83.38 Aligned_cols=128 Identities=18% Similarity=0.172 Sum_probs=80.0
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CE---Eecc-------ccCceEEEec-----CcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GH---PIDF-------ENSKRLRLVD-----GTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~---~~~~-------~~~~~~~~~~-----~~~l~i~~~~~ 89 (216)
+...|..+.+.+|+.++|.|.+ .+.....+.||+. ++ .+.. ...+|+.... ...|+|.+++.
T Consensus 3 V~Q~p~~v~v~~G~svtL~C~~-s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~ 81 (199)
T 3gsn_A 3 VEQSPQSLHVQEGDSTNFTCSF-PSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQP 81 (199)
T ss_dssp CEEECSEEEEETTCCCEEEEEC-CCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCG
T ss_pred EEECCCEEEEeCCCCEEEEEEE-cCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcc
Confidence 4556777889999999999998 4434458999984 21 1110 1123444321 23699999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccCC
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAMP 160 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~ 160 (216)
+|+|.|.|.+.............|.|... |.+...... ...+.|.|.+.+..+ .++.|.+++..+.
T Consensus 82 ~DsG~Y~Ca~~~~~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~-----~~~~tl~Cl~~gf~P~i~~~~~~~~~~~~ 153 (199)
T 3gsn_A 82 EDSATYLCARNTGNQFYFGTGTSLTVIPNIQNPDPAVYQLRDS-----KSSDKSVCLFTDFDSQTNVSQSKDSDAYI 153 (199)
T ss_dssp GGCEEEEEEEESSSCEEECSCEEEEEECCCSSCCCEEEECCCS-----SSSSSCCEEEETCCTTCCSSCSSCSSEEE
T ss_pred cCCccEEEEEcccccccCCCCEEEEEecccCCCCCEEEEcccC-----CCCceEEEEeecccCCeEeEeccCCCeEe
Confidence 99999999996532212223346666542 333222211 123678999977643 4588999887654
No 466
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.23 E-value=9.4e-11 Score=92.01 Aligned_cols=88 Identities=25% Similarity=0.369 Sum_probs=74.3
Q ss_pred cceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-eeee---cCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 118 KPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-MSVL---PSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 118 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
.|.+...+....+.+|+++.+.|.+.|.|.|.+.|++++..+.... .... ...+|.|.++..+|+|.|+|.|.|..
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~ 561 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSY 561 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCC
Confidence 4666677778889999999999999999999999999999886543 3222 22469999999999999999999999
Q ss_pred cceEEEEEEEEE
Q psy573 194 GKISASATLTVQ 205 (216)
Q Consensus 194 ~~~~~~~~l~v~ 205 (216)
|+.+..+.|.|.
T Consensus 562 G~~~~~v~l~Vt 573 (573)
T 3uto_A 562 GTKEEIVFLNVT 573 (573)
T ss_dssp EEEEEEEEEEEC
T ss_pred CcEEEEEEEEEC
Confidence 999999988873
No 467
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.23 E-value=7.9e-11 Score=72.04 Aligned_cols=72 Identities=17% Similarity=0.282 Sum_probs=52.0
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCC-----eeEEeeCCEEeccccCceEEEecCcEEEEcccCCCCCceEEEE
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEP-----TLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKTDDGRYQCV 98 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~-----~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 98 (216)
.|.+...|.. .+.+|++|+|.|.+ ...+.. .+.|++++..+.. ...+..|.|.+++.+|+|.|+|.
T Consensus 8 kP~l~~~p~~-~v~~G~~VtL~C~~-~~~~~~~~~~~~~~w~k~g~~l~~-------~~~~~~l~i~~v~~~dsG~Y~C~ 78 (108)
T 4hwn_A 8 APILRAVPSA-EPQAGSPMTLSCQT-KLPLQRSAARLLFSFYKDGRIVQS-------RGLSSEFQIPTASEDHSGSYWCE 78 (108)
T ss_dssp CCEEEEESCS-SCBTTCCEEEEEEC----------CCEEEEEETTEEEEE-------EESCCEEEESSCCGGGCEEEEEE
T ss_pred CCEEEecCCC-cCCCCCcEEEEEcc-cCCCCCcCcceEEEEEECCcCccC-------CCcccEEEeCccCcccCeEEEEE
Confidence 3555555543 47899999999997 433332 4999999987731 23467899999999999999999
Q ss_pred EEcCCC
Q psy573 99 VKNVAG 104 (216)
Q Consensus 99 ~~~~~~ 104 (216)
+.+..+
T Consensus 79 ~~~~~~ 84 (108)
T 4hwn_A 79 AATEDN 84 (108)
T ss_dssp EECTTS
T ss_pred EEeCCC
Confidence 997643
No 468
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.23 E-value=5e-11 Score=83.36 Aligned_cols=81 Identities=27% Similarity=0.460 Sum_probs=67.7
Q ss_pred CceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCC-----eeeecCCeEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy573 126 KDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDR-----MSVLPSRSLQLSDVRLEDGGEYVCEAENAVGKISASA 200 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-----~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~~~~~~~~ 200 (216)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ........|.|.++..+|+|.|+|.+.|..+.....+
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 102 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTY 102 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEE
Confidence 45688899999999999999999999999998765321 1222446799999999999999999999999888888
Q ss_pred EEEEEe
Q psy573 201 TLTVQS 206 (216)
Q Consensus 201 ~l~v~~ 206 (216)
.|.|..
T Consensus 103 ~l~V~~ 108 (241)
T 3grw_A 103 TLDVLE 108 (241)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 888875
No 469
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.23 E-value=1.3e-10 Score=72.43 Aligned_cols=76 Identities=14% Similarity=0.317 Sum_probs=54.8
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc-------ccCceEEEe---cCcEEEEcccCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF-------ENSKRLRLV---DGTNLAIQDSRKT 90 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~-------~~~~~~~~~---~~~~l~i~~~~~~ 90 (216)
.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. . .+.. ....++... ...+|.|.+++.+
T Consensus 5 ~v~q~p~~v~v~~G~~vtL~C~~-~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (119)
T 2e27_L 5 QMTQSPSSLSASLGGKVTITCKA-NQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPE 83 (119)
T ss_dssp CEEEECSEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGG
T ss_pred eeEecCCeEEEeCCCCEEEEEEe-CCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChH
Confidence 45556777889999999999998 55567789999853 1 1110 113344432 1347999999999
Q ss_pred CCceEEEEEEcC
Q psy573 91 DDGRYQCVVKNV 102 (216)
Q Consensus 91 d~g~y~C~~~~~ 102 (216)
|+|.|.|.+.+.
T Consensus 84 DsG~Y~C~~~~~ 95 (119)
T 2e27_L 84 DAATYYCLQYDN 95 (119)
T ss_dssp GCEEEEEEECGG
T ss_pred HCEEEEEEEccC
Confidence 999999999864
No 470
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.23 E-value=3.9e-11 Score=82.82 Aligned_cols=127 Identities=17% Similarity=0.211 Sum_probs=79.8
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEec---c-----ccCceEEEec-----CcEEEEcccCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPID---F-----ENSKRLRLVD-----GTNLAIQDSRKT 90 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~~---~-----~~~~~~~~~~-----~~~l~i~~~~~~ 90 (216)
.+...|..+.+.+|+.++|.|.+ .+. ...+.||+. ++... . ...+|+.... ...|+|.+++.+
T Consensus 3 ~V~Q~p~~v~v~~G~sVtL~C~~-s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~~ 80 (229)
T 3mbe_C 3 PVEQNPPALSLYEGADSGLRCNF-STT-MKSVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQLE 80 (229)
T ss_dssp CEEEECSEEEEETTCCEEEEEEE-SSC-CSCEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCST
T ss_pred cEEEcCCEEEEEcCCCEEEEEEE-eCC-CcEEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCccc
Confidence 34566777899999999999998 333 568999984 22111 0 1123444331 246999999999
Q ss_pred CCceEEEEEEcCC--C-CcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCccC
Q psy573 91 DDGRYQCVVKNVA--G-TRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSAM 159 (216)
Q Consensus 91 d~g~y~C~~~~~~--~-~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~ 159 (216)
|+|.|+|.+.... . ........|.|... |.+... ......+.|.|.+.+. |..++.|.+++..+
T Consensus 81 DSG~Y~Ca~~~~~~~~~~~fG~GT~L~V~~~~~~p~P~Vf~~-----~~~~~~vtl~Cl~~gf~P~i~v~~~~~~~~~ 153 (229)
T 3mbe_C 81 DSGTYFCAAEDGGSGNKLIFGTGTLLSVKPNIQNPEPAVYQL-----KDPRSQDSTLCLFTDFDSQINVPKTMESGTF 153 (229)
T ss_dssp TCBEEEEEEECSSSTTCEEECCCCEEEEECCCSSCCCEEEEE-----ECTTCTTCEEEEEESCCSSSCCCCCCSSSEE
T ss_pred CCCCEEEEEEeCCCcccceeCCCEEEEEecccCCCCCEEEEc-----cCCCCCEEEEEEccccCCceEeEeeccCceE
Confidence 9999999998532 1 11123345666542 222111 1112358899999776 54568999887654
No 471
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=99.23 E-value=7.7e-12 Score=85.91 Aligned_cols=161 Identities=16% Similarity=0.129 Sum_probs=90.9
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc--------ccCceEEEec-----CcEEEEcccC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF--------ENSKRLRLVD-----GTNLAIQDSR 88 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~--------~~~~~~~~~~-----~~~l~i~~~~ 88 (216)
+...|..+.+.+|+.++|.|.+........+.||+.. . .+.. ...+|+.... ...|.|.+++
T Consensus 6 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 85 (211)
T 2ak4_D 6 VTQAQTEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQ 85 (211)
T ss_dssp EECCCCEEEEETTCCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCC
T ss_pred eEEeCCEEEEecCCCEEEEEEecCCcCceeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccc
Confidence 4455677889999999999987322222379999842 1 1110 1234444431 2379999999
Q ss_pred CCCCceEEEEEEcCC---CCcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccC
Q psy573 89 KTDDGRYQCVVKNVA---GTRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAM 159 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~---~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~ 159 (216)
.+|+|.|+|.+.+.. .........|.|... |.+..... ..+.+.|.|.+.+ .|.+.+.+.......
T Consensus 86 ~~Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~vtL~Cl~~gf~P~~~v~~~~~~~~~ 160 (211)
T 2ak4_D 86 VVDSAVYFCALSGFYNTDKLIFGTGTRLQVFPNIQNPDPAVYQLRD-----SKSSDKSVCLFTDFDSQTNVSQSKDSDVY 160 (211)
T ss_dssp GGGCEEEEEEEECSBTTSCCEECCCEEEEEECCCSSCCCEEEEEBC-----CSSSCCEEEEEESCCTTCCCCCCSSSSCE
T ss_pred cccCceEEEEEEcCCCcceeeECCCEEEEEeCcCCCCCCEEEEccC-----CCCceEEEEEeeeecCCcccccccccceE
Confidence 999999999998642 111122345666532 33322111 1247899999977 566655211110000
Q ss_pred -CCCCeee--ecCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 160 -PEDRMSV--LPSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 160 -~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
....... ...+. ++....+.+++.|+|.+.+..
T Consensus 161 ~t~~~~~~~~~~~S~-t~~~~~w~~g~~~tC~V~~~~ 196 (211)
T 2ak4_D 161 ITDKCVLDMRSMDFK-SNSAVAWSNKSDFACANAFNN 196 (211)
T ss_dssp ECCCEEEEEGGGTEE-EEEEEEEECSTTCCTTSTTTT
T ss_pred ecCchhccccccccc-cccHHHccCCCceEEEEecCC
Confidence 0000000 11223 555566677789999887654
No 472
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.22 E-value=1.1e-10 Score=73.28 Aligned_cols=80 Identities=24% Similarity=0.402 Sum_probs=58.3
Q ss_pred CceeEeCCCcEEEEEEeCCCCC---cEEEEeeCCccCC------------------CCCeeeec------CCeEEEecCC
Q psy573 126 KDTTVSAGSIIVFECSVGGDAV---LTVHWKRLGSAMP------------------EDRMSVLP------SRSLQLSDVR 178 (216)
Q Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~------------------~~~~~~~~------~~~l~i~~~~ 178 (216)
.......|+++.|.|.....+. ..+.|+|++.... ..+..... +.+|.|.+++
T Consensus 13 ~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~ 92 (125)
T 4gos_A 13 VASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQ 92 (125)
T ss_dssp ECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCC
T ss_pred ceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCC
Confidence 3456778999999999864432 3699998653210 01222211 2469999999
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy573 179 LEDGGEYVCEAENAVGKISASATLTVQ 205 (216)
Q Consensus 179 ~~d~g~y~C~~~n~~~~~~~~~~l~v~ 205 (216)
.+|+|.|+|.+.|..|.....+.|.|=
T Consensus 93 ~~D~G~Y~C~v~~~~g~~~~~v~LkVG 119 (125)
T 4gos_A 93 LTDAGTYKCYIITSKGKGNANLEYKTG 119 (125)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hHHCEEEEEEEEeCCCeEEEEEEEEEC
Confidence 999999999999999999888888774
No 473
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.22 E-value=1.2e-10 Score=71.44 Aligned_cols=83 Identities=22% Similarity=0.250 Sum_probs=57.7
Q ss_pred cceEEecCCcEEEEeeCCCCCCCCeeEEeeCC-EEec------------cccCceEEEe-cCcEEEEcccCCCCCceEEE
Q psy573 32 KSQRVAAGDTALLECGPPRGHPEPTLVWKKNG-HPID------------FENSKRLRLV-DGTNLAIQDSRKTDDGRYQC 97 (216)
Q Consensus 32 ~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~-~~~~------------~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C 97 (216)
..+.+.+|++++|.|.+..+.+.+.+.||+.. ..+. ....+++.+. .+.+|.|.+++.+|+|.|.|
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C 90 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKGTYYM 90 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCEEEEE
T ss_pred CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCeEEEE
Confidence 45789999999999987334566799999942 2121 1112455554 45689999999999999999
Q ss_pred EEEcCCCCcccceeEEEEe
Q psy573 98 VVKNVAGTRESTDAVLRVL 116 (216)
Q Consensus 98 ~~~~~~~~~~~~~~~l~v~ 116 (216)
.+.+... ....+.|.|.
T Consensus 91 ~v~~~~~--~~~~~~L~V~ 107 (110)
T 2ptt_A 91 RVLRETE--NELKITLEVF 107 (110)
T ss_dssp EEESSSB--CCEEEEEEEE
T ss_pred EEEcCCC--cEEEEEEEEE
Confidence 9986542 2334556554
No 474
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.22 E-value=6.3e-11 Score=73.44 Aligned_cols=75 Identities=24% Similarity=0.353 Sum_probs=52.1
Q ss_pred cccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEE--------ec-------cccCceEEEe-----cCcEEEEcccCC
Q psy573 30 QPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHP--------ID-------FENSKRLRLV-----DGTNLAIQDSRK 89 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~--------~~-------~~~~~~~~~~-----~~~~l~i~~~~~ 89 (216)
.+..+.+.+|++++|.|.+........+.||+.... +. .....++... ...+|.|.+++.
T Consensus 3 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 82 (116)
T 2or8_A 3 SYVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVE 82 (116)
T ss_dssp CCEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred CcceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCc
Confidence 345678999999999999733234567999997521 10 1123344432 124799999999
Q ss_pred CCCceEEEEEEcCCC
Q psy573 90 TDDGRYQCVVKNVAG 104 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~ 104 (216)
+|+|.|.|.+.+..+
T Consensus 83 ~DsG~Y~C~v~~~~~ 97 (116)
T 2or8_A 83 SDSGLYCCRVEIPGW 97 (116)
T ss_dssp GGCEEEEEEECCSST
T ss_pred ccCEEEEEEEEcCCc
Confidence 999999999987543
No 475
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=99.22 E-value=2.4e-11 Score=82.65 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=80.6
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EE---eccc------cCceEEEec-----CcEEEEcccCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HP---IDFE------NSKRLRLVD-----GTNLAIQDSRK 89 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~---~~~~------~~~~~~~~~-----~~~l~i~~~~~ 89 (216)
.+...|..+.+.+|+.++|.|.+ .+.....+.||+.. +. +... ..+|+.... ...|+|.+++.
T Consensus 4 ~V~Q~p~~v~v~~G~sVtL~C~~-s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~ 82 (208)
T 4ei6_A 4 KVQQSPESLSVPEGGMASLNCTS-SDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQP 82 (208)
T ss_dssp CEEEECSEEEEETTCCEECEEEE-CCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCG
T ss_pred eEEEeCCEEEEECCCCEEEEEEE-cCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcc
Confidence 45566778899999999999998 44344578999842 11 1100 233444431 24799999999
Q ss_pred CCCceEEEEEEcCC----CCcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccC
Q psy573 90 TDDGRYQCVVKNVA----GTRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAM 159 (216)
Q Consensus 90 ~d~g~y~C~~~~~~----~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~ 159 (216)
+|+|.|+|.+.... .........|.|... |.+.... .....+.|.|.+.+.++ .++.|.+++..+
T Consensus 83 ~DsG~Y~Ca~~~~~~~~~~~~fG~GT~L~V~~~~~~~~PsVf~l~-----~~~~~~tl~Cl~~~f~P~i~v~~~~~~~~~ 157 (208)
T 4ei6_A 83 SDSALYFCAASEQNNYAQGLTFGLGTRVSVFPYIQNPDPAVYQLR-----DSKSSDKSVCLFTDFDSQTNVSQSKDSDVY 157 (208)
T ss_dssp GGCEEEEEEEEECCSSCCCCEECCCEEEEEECCCSSCCCEEEEEE-----BSSCTTCEEEEEESCCTTCCCCCCSSTTCE
T ss_pred cCCCcEEEEEecCCCccccccCCCCEEEEEeCcccCCCCEEEEcc-----cCCCCceEEEEeeccCCceEeeecccCcEE
Confidence 99999999987431 112233346666542 2221110 11123679999977644 468999988765
Q ss_pred CCC
Q psy573 160 PED 162 (216)
Q Consensus 160 ~~~ 162 (216)
..+
T Consensus 158 ~~~ 160 (208)
T 4ei6_A 158 ITD 160 (208)
T ss_dssp ECC
T ss_pred EeC
Confidence 433
No 476
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.21 E-value=4.7e-11 Score=82.92 Aligned_cols=86 Identities=22% Similarity=0.360 Sum_probs=67.9
Q ss_pred CCCceeEeCCCcEEEEEEeCCCCC-cEEEEeeCCccCC--------------CCCee----------eecCCeEEEecCC
Q psy573 124 GPKDTTVSAGSIIVFECSVGGDAV-LTVHWKRLGSAMP--------------EDRMS----------VLPSRSLQLSDVR 178 (216)
Q Consensus 124 ~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~--------------~~~~~----------~~~~~~l~i~~~~ 178 (216)
.+....+.+|+.+.|.|.+.+.+. +.+.|++++.... ..+.. ....+.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 345668899999999999988885 8999998765432 11222 3344669999999
Q ss_pred CCCCeEEEEEEEcCC-cceEEEEEEEEEecce
Q psy573 179 LEDGGEYVCEAENAV-GKISASATLTVQSKYL 209 (216)
Q Consensus 179 ~~d~g~y~C~~~n~~-~~~~~~~~l~v~~~p~ 209 (216)
.+|+|.|.|.+.|.. +.....+.|.|..+|.
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 117 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPE 117 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCC
Confidence 999999999999987 7788888999987754
No 477
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.21 E-value=3.7e-11 Score=73.51 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=58.8
Q ss_pred ecceEEeCCCceeEeCCCcEEEEEEeCCCCCc-----EEEEeeCCccCCCCCeeeecCCeEEEecCCCCCCeEEEEEEEc
Q psy573 117 VKPYIIRGPKDTTVSAGSIIVFECSVGGDAVL-----TVHWKRLGSAMPEDRMSVLPSRSLQLSDVRLEDGGEYVCEAEN 191 (216)
Q Consensus 117 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 191 (216)
..|.+...+. ..+.+|+.++|.|.+.+.+.. .+.|+|++..+.. ......|.|.+++.+|+|.|+|.+.+
T Consensus 7 ~kP~l~~~p~-~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~----~~~~~~l~i~~v~~~dsG~Y~C~~~~ 81 (108)
T 4hwn_A 7 PAPILRAVPS-AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS----RGLSSEFQIPTASEDHSGSYWCEAAT 81 (108)
T ss_dssp CCCEEEEESC-SSCBTTCCEEEEEEC---------CCEEEEEETTEEEEE----EESCCEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCEEEecCC-CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC----CCcccEEEeCccCcccCeEEEEEEEe
Confidence 3455555444 357889999999998755443 4999999976541 23467899999999999999999998
Q ss_pred CCc---ceEEEEEEEEEec
Q psy573 192 AVG---KISASATLTVQSK 207 (216)
Q Consensus 192 ~~~---~~~~~~~l~v~~~ 207 (216)
..+ ..+..+.|.|.+.
T Consensus 82 ~~~~~~~~S~~l~L~V~g~ 100 (108)
T 4hwn_A 82 EDNQVWKQSPQLEIRVQGA 100 (108)
T ss_dssp TTSSSEEECCCEEECCBC-
T ss_pred CCCceeccCCCEEEEEEec
Confidence 765 2444566666654
No 478
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.21 E-value=6.7e-11 Score=90.23 Aligned_cols=93 Identities=20% Similarity=0.360 Sum_probs=71.2
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEe-cc-ccCceEEEecCcEEEEcccCCCCCceEEEEEEc
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPI-DF-ENSKRLRLVDGTNLAIQDSRKTDDGRYQCVVKN 101 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~-~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 101 (216)
+|.+...+....+.+|++++|.|.+ +.|.+.+.|++++..+ .. ....++....+++|.|.+++.+|+|.|+|.+.|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~--~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 418 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA--STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSN 418 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE--SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEEC
T ss_pred CCcccccccceeeccCceEEEEeec--CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEc
Confidence 5677777888999999999999998 4588899999954433 22 123456666778899999999999999999999
Q ss_pred CCCCcccceeEEEEeecc
Q psy573 102 VAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 102 ~~~~~~~~~~~l~v~~~p 119 (216)
..|.. ..++.+.|..+|
T Consensus 419 ~~G~~-~~~~~~~v~~~~ 435 (440)
T 3zyj_A 419 SVGNT-TASATLNVTGTH 435 (440)
T ss_dssp SSCEE-EEEEEEEEC---
T ss_pred CCCcE-EEEEEEEEeccc
Confidence 98875 456677776654
No 479
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.21 E-value=5.8e-11 Score=81.32 Aligned_cols=88 Identities=19% Similarity=0.291 Sum_probs=67.3
Q ss_pred CCceeEeCCCcEEEEEEeCCCC----CcEEEEeeCC----------------ccCC------CCCeeee------cCCeE
Q psy573 125 PKDTTVSAGSIIVFECSVGGDA----VLTVHWKRLG----------------SAMP------EDRMSVL------PSRSL 172 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~~~----------------~~~~------~~~~~~~------~~~~l 172 (216)
+....+.+|+.+.|.|.+.+.+ .+.+.|++++ .... ..+.... ....|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3455788999999999998776 4689999843 2222 2233332 23679
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecceeee
Q psy573 173 QLSDVRLEDGGEYVCEAENAVGKISASATLTVQSKYLKVI 212 (216)
Q Consensus 173 ~i~~~~~~d~g~y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 212 (216)
.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+..
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~ 126 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTR 126 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCE
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCce
Confidence 9999999999999999999999888899999998776543
No 480
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.21 E-value=5.4e-11 Score=84.16 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=65.3
Q ss_pred ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CEEec----------cccCceEEEec---CcEEEEcccC
Q psy573 24 REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GHPID----------FENSKRLRLVD---GTNLAIQDSR 88 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~~~~----------~~~~~~~~~~~---~~~l~i~~~~ 88 (216)
++.+...|....+.+|++++|.|.+ .+.+.+.+.||+. +.... .....++.... ..+|.|.+++
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 216 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRA-SQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLE 216 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCC
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEE-ecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCC
Confidence 5677777878899999999999998 6667779999984 22111 01123333221 2369999999
Q ss_pred CCCCceEEEEEEcCCCCcccceeEEEEeecc
Q psy573 89 KTDDGRYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 89 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
.+|+|.|+|.+.+...........|.|..++
T Consensus 217 ~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 217 SEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred hhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 9999999999988654444555677776544
No 481
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.20 E-value=1.1e-10 Score=71.24 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=53.9
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eecc-------ccCceEEEec---CcEEEEcccCCCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PIDF-------ENSKRLRLVD---GTNLAIQDSRKTD 91 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~~-------~~~~~~~~~~---~~~l~i~~~~~~d 91 (216)
+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. . .+.. ....++.... ..+|.|.+++.+|
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMT-STDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSED 82 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEeCCCeEEecCCCCEEEEEEE-CCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHH
Confidence 4455677889999999999998 55567789999853 1 1110 1133444332 2379999999999
Q ss_pred CceEEEEEEcC
Q psy573 92 DGRYQCVVKNV 102 (216)
Q Consensus 92 ~g~y~C~~~~~ 102 (216)
+|.|.|.+.+.
T Consensus 83 sG~Y~C~~~~~ 93 (107)
T 1i8k_A 83 VGDYYCLQSFN 93 (107)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEeeC
Confidence 99999999864
No 482
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.20 E-value=1.2e-10 Score=74.55 Aligned_cols=85 Identities=25% Similarity=0.353 Sum_probs=58.4
Q ss_pred ccceEEecCCcEEEEeeCCCCCC---CCeeEEeeCCE--Eec-------------cccCceEEEec------CcEEEEcc
Q psy573 31 PKSQRVAAGDTALLECGPPRGHP---EPTLVWKKNGH--PID-------------FENSKRLRLVD------GTNLAIQD 86 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~---~~~~~W~~~~~--~~~-------------~~~~~~~~~~~------~~~l~i~~ 86 (216)
+..+.+.+|++++|.|.+ ...+ .+.+.||+++. .+. ....+++.+.. +.+|.|.+
T Consensus 13 ~~~v~~~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 13 GHPIRALVGDEAELPCRI-SPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp SSCEEEETTSCEEEEEEE-ESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCEEEEeCCCEEEeeEc-cCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 345789999999999987 3322 36899999764 110 01134555443 24799999
Q ss_pred cCCCCCceEEEEEEcCCCCcccceeEEEEee
Q psy573 87 SRKTDDGRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
++.+|+|.|+|.+.+..+. ....+.|.|..
T Consensus 92 v~~~D~G~Y~C~v~~~~~~-~~~~~~L~V~~ 121 (139)
T 1pko_A 92 VRFSDEGGYTCFFRDHSYQ-EEAAVELKVED 121 (139)
T ss_dssp CCGGGCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred CCHHHCEEEEEEEEcCCCc-eEEEEEEEEec
Confidence 9999999999999987653 24456777764
No 483
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=1e-12 Score=97.22 Aligned_cols=115 Identities=20% Similarity=0.265 Sum_probs=87.0
Q ss_pred CCceEEEEEEcCCCCcccceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCC--Ceeeec
Q psy573 91 DDGRYQCVVKNVAGTRESTDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPED--RMSVLP 168 (216)
Q Consensus 91 d~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~~~~~~ 168 (216)
+.|.|+|...+... .+.+.+-.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ......
T Consensus 136 ~~~~~~C~~~~~l~-----~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 210 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-----HMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLP 210 (347)
T ss_dssp GGGCCCCSSSSCSS-----CCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSS
T ss_pred cccCCCCCCChHHh-----cCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecc
Confidence 45788998655111 12222334677777777888999999999999999999999999988764321 111224
Q ss_pred CCeEEEecCCCCCCe-EEEEEEEcCCcceEEEEEEEEEeccee
Q psy573 169 SRSLQLSDVRLEDGG-EYVCEAENAVGKISASATLTVQSKYLK 210 (216)
Q Consensus 169 ~~~l~i~~~~~~d~g-~y~C~~~n~~~~~~~~~~l~v~~~p~~ 210 (216)
.+.|.|.++..+|+| .|+|.+.|..|.....+.|.|..+|.+
T Consensus 211 ~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i 253 (347)
T 2ifg_A 211 SLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV 253 (347)
T ss_dssp EEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE
T ss_pred cceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee
Confidence 467999999999999 999999999999888888888877764
No 484
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.20 E-value=1e-10 Score=71.93 Aligned_cols=76 Identities=14% Similarity=0.243 Sum_probs=54.6
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCE-----Eecc-------ccCceEEEec---CcEEEEcccCCC
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGH-----PIDF-------ENSKRLRLVD---GTNLAIQDSRKT 90 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~-----~~~~-------~~~~~~~~~~---~~~l~i~~~~~~ 90 (216)
.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+... .+.. ....++.... ..+|+|.+++.+
T Consensus 6 ~v~q~p~~~~~~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 84 (111)
T 1i3g_L 6 VLTQSHKFMSTSVGDRVSITCKA-SQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSE 84 (111)
T ss_dssp CEEESCSEEECCTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEEeCCEEEEcCCCCEEEEEEe-CCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHH
Confidence 45556777889999999999998 455567899998531 1210 1123444331 247999999999
Q ss_pred CCceEEEEEEcC
Q psy573 91 DDGRYQCVVKNV 102 (216)
Q Consensus 91 d~g~y~C~~~~~ 102 (216)
|+|.|.|.+.+.
T Consensus 85 DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 85 DLADYFCQQYSS 96 (111)
T ss_dssp GCSEEEEEECSS
T ss_pred HCEEEEEEEecC
Confidence 999999999865
No 485
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.20 E-value=6.6e-11 Score=83.07 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=68.5
Q ss_pred hhhceeeEEee--ccceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEEeccccCceEEEecCcEEEEcccCCC
Q psy573 13 EEKKKLKIEML--REEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHPIDFENSKRLRLVDGTNLAIQDSRKT 90 (216)
Q Consensus 13 ~~~~~l~v~~~--~~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 90 (216)
++.+.|.|... +|.+...+ ...+.+|++++|.|.+ .+ +.+.+.|+|++..+.. .......+..|.|.+++.+
T Consensus 89 S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~-~~-~~~~~~w~k~g~~~~~---~~~~~~~~~~l~I~~v~~~ 162 (242)
T 1p6f_A 89 SNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSHV---QRGYGKVQAEFPLGPVTTA 162 (242)
T ss_dssp CCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEEC-TT-SCSEEEEEECSSSCEE---EEEECSSEEEEEEEECCGG
T ss_pred CcceEEEeecccCCCceEccC-CCccCCCCcEEEEEec-CC-CCCEEEEEECCCccCc---cccCCCceEEEEeCCCccc
Confidence 45667777643 35555455 4568999999999998 33 4469999999876532 1111223467999999999
Q ss_pred CCceEEEEEEcCC--CCcccceeEEEEeec
Q psy573 91 DDGRYQCVVKNVA--GTRESTDAVLRVLVK 118 (216)
Q Consensus 91 d~g~y~C~~~~~~--~~~~~~~~~l~v~~~ 118 (216)
|+|.|+|.+.+.. ....+..+.|.|...
T Consensus 163 d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 163 HRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp GCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred cCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 9999999998754 222355667777653
No 486
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=99.20 E-value=9.5e-11 Score=80.01 Aligned_cols=118 Identities=20% Similarity=0.256 Sum_probs=75.1
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eec-c------ccCceEEEec-----CcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PID-F------ENSKRLRLVD-----GTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~-~------~~~~~~~~~~-----~~~l~i~~~~~ 89 (216)
+...|..+.+.+|+.++|.|.+ .+.....+.||+.. . .+. . ...+|+.... ..+|.|.+++.
T Consensus 3 v~q~p~~v~v~~G~~v~L~C~~-s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 81 (203)
T 2bnu_A 3 VTQIPAALSVPEGENLVLNCSF-TDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQP 81 (203)
T ss_dssp EEEECSEEEEETTCCEEEEEEE-SCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCG
T ss_pred cEEcCCEEEEeCCCCEEEEEEE-CCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCc
Confidence 3455777899999999999997 44444589999843 1 111 0 1134444431 24799999999
Q ss_pred CCCceEEEEEEcCC---C-CcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEE
Q psy573 90 TDDGRYQCVVKNVA---G-TRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTV 150 (216)
Q Consensus 90 ~d~g~y~C~~~~~~---~-~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i 150 (216)
+|+|.|+|.+.+.. . ........|.|... |.+..... ..+.+.|.|.+.+ +|.+.+
T Consensus 82 ~Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~~~L~C~~~g~~P~p~v 147 (203)
T 2bnu_A 82 GDSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRR-----SKSSDKSVCLFTDFDSQTNV 147 (203)
T ss_dssp GGCEEEEEEEEECSSSTTCCEECCCEEEEEECCCSSCCCEEEEECC-----SSSSSCEEEEEESCCTTCCC
T ss_pred ccCeEEEEEEEcCcCcceeeeeCCCEEEEEeCCCCCCCCeEEecCC-----CCCCcEEEEEccccccCccc
Confidence 99999999998642 1 11112346666532 33332111 1247899999987 688877
No 487
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.19 E-value=2.1e-10 Score=73.91 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=61.5
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC-----EEecc-------ccCceEEEec---CcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG-----HPIDF-------ENSKRLRLVD---GTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~-----~~~~~-------~~~~~~~~~~---~~~l~i~~~~~ 89 (216)
+.+...|..+.+.+|++++|.|.+ .+.+.+.+.||+.. ..+.. ....++.... ..+|+|.+++.
T Consensus 17 ~~v~q~p~~v~v~~G~sVtL~C~~-s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~ 95 (146)
T 2yc1_B 17 IVLTQSPATLSVSPGERATLSCRA-SQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEP 95 (146)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceEEEeCCEEEEecCCCEEEEEEE-CCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCH
Confidence 345556777889999999999997 45556789999953 12211 1123444331 24799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEeecc
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVLVKP 119 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~~p 119 (216)
+|+|.|.|.+.+...........|.|..++
T Consensus 96 ~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~~ 125 (146)
T 2yc1_B 96 EDFAIYYCQQYRYSPRTFGQGTKVEIKRAA 125 (146)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred HHCEEEEEEEecCCCCeECCCEEEEEeCCc
Confidence 999999999987533222334566665544
No 488
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.19 E-value=1e-10 Score=71.62 Aligned_cols=82 Identities=22% Similarity=0.375 Sum_probs=53.8
Q ss_pred ceEEecCCcEEEEeeCCCCCC---CCeeEEeeCCEE-------e--------ccccCceEEEec-----CcEEEEcccCC
Q psy573 33 SQRVAAGDTALLECGPPRGHP---EPTLVWKKNGHP-------I--------DFENSKRLRLVD-----GTNLAIQDSRK 89 (216)
Q Consensus 33 ~~~~~~G~~~~l~C~~~~~~~---~~~~~W~~~~~~-------~--------~~~~~~~~~~~~-----~~~l~i~~~~~ 89 (216)
.+.+.+|++++|.|.+ ...+ ...+.|++.... + ......++.... +.+|.|.+++.
T Consensus 3 ~v~~~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 81 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSY-TLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTL 81 (109)
T ss_dssp EEEECTTSCEEECCBC-CCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCG
T ss_pred CEEEEcCCCEEEEEEe-ECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCC
Confidence 4678899999999997 3333 235899995421 1 011233444432 25799999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEe
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVL 116 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~ 116 (216)
+|+|.|.|.+.+..+.. ...+.|.|.
T Consensus 82 ~D~G~Y~C~v~~~~~~~-~~~~~l~V~ 107 (109)
T 2oyp_A 82 DDHGTYCCRIQFPGLMN-DKKLELKLD 107 (109)
T ss_dssp GGCEEEEEEECCSSTTC-CEEEEEEEE
T ss_pred hhCeEEEEEEEcCCccc-ceEEEEEEE
Confidence 99999999999865432 334445443
No 489
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=79.29 Aligned_cols=84 Identities=21% Similarity=0.313 Sum_probs=64.8
Q ss_pred CCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccCC----C---------------CCeeeecCCeEEEecCCCCCCeE
Q psy573 125 PKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAMP----E---------------DRMSVLPSRSLQLSDVRLEDGGE 184 (216)
Q Consensus 125 ~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~----~---------------~~~~~~~~~~l~i~~~~~~d~g~ 184 (216)
+....+.+|+++.|.|.+.+ .+.+.+.|++++..+. . .+.....+..|.|.+++.+|+|.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCce
Confidence 45567889999999999865 4557899999865321 0 12233346789999999999999
Q ss_pred EEEEEEcCCcceEEEEEEEEEecc
Q psy573 185 YVCEAENAVGKISASATLTVQSKY 208 (216)
Q Consensus 185 y~C~~~n~~~~~~~~~~l~v~~~p 208 (216)
|.|.+.|..+.....+.|.|..++
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~~ 108 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQL 108 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCC
T ss_pred EEEEEEecCCCeEEEEEEEEEccC
Confidence 999999998887778888887654
No 490
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=99.19 E-value=3.6e-11 Score=82.72 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=80.2
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeC--CE---Eec-c------ccC-ceEEEec-----CcEEEEccc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKN--GH---PID-F------ENS-KRLRLVD-----GTNLAIQDS 87 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~--~~---~~~-~------~~~-~~~~~~~-----~~~l~i~~~ 87 (216)
.+...|..+.+.+|+.++|.|.+ .+.....+.||+. ++ .+. . ... +|+.... ...|+|.++
T Consensus 11 ~V~Qsp~~v~v~~G~sVtL~C~~-s~~~~~~v~WyrQ~pg~~~~~Li~~~~~~~~~~~~~Rfs~s~~~~~~~~sLtI~~l 89 (226)
T 3tjh_C 11 SVTQPDARVTVSEGASLQLRCKY-SYSATPYLFWYVQYPRQGLQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 89 (226)
T ss_dssp EEECSCSEEEEETTSCEEECCEE-EESSCEEEEEEEECTTSCCEEEEEECSSSSEEECGGGEEEEEETTTTEEEEEESSC
T ss_pred EEEEeCCEEEEEcCCCEEEEEEE-ecCCCCeEEEEEECCCCCcEEEEEecCCCccccccCcEEEEEcCCCCEEEEEEecC
Confidence 45556777889999999999987 3333458999984 22 111 0 112 5555431 236999999
Q ss_pred CCCCCceEEEEEEcCC--C-CcccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCCC-CCcEEEEeeCCcc
Q psy573 88 RKTDDGRYQCVVKNVA--G-TRESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGGD-AVLTVHWKRLGSA 158 (216)
Q Consensus 88 ~~~d~g~y~C~~~~~~--~-~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~ 158 (216)
+.+|+|.|+|.+.... . ........|.|... |.+.... .....+.|.|.+.+. |..++.|.+++..
T Consensus 90 q~~DSG~YyCa~~~~~~~~~~~fG~GT~LtV~~~~~~~~P~V~~~~-----~~~~~~tl~Cl~~~f~P~i~v~~~~~~~~ 164 (226)
T 3tjh_C 90 HWSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPNIQNPDPAVYQLR-----DSKSSDKSVCLFTDFDSQTNVSQSKDSDV 164 (226)
T ss_dssp CGGGCEEEEEEEEESSCSSSEEECCCEEEEEECCCSSCCCEEEEEE-----ECC---CEEEEEESCCTTCCCCCCSCTTE
T ss_pred CcccCCCEEEEEEecCCccccccCCCeEEEEeCCCCCCCCEEEEcc-----cCCCCeEEEEEcccccCCcEEEeeccCce
Confidence 9999999999987531 1 11122345666542 2222111 111347899999765 5456899999876
Q ss_pred CCCC
Q psy573 159 MPED 162 (216)
Q Consensus 159 ~~~~ 162 (216)
+...
T Consensus 165 ~~~~ 168 (226)
T 3tjh_C 165 YITD 168 (226)
T ss_dssp EECC
T ss_pred eecC
Confidence 6443
No 491
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.19 E-value=9e-11 Score=74.53 Aligned_cols=88 Identities=20% Similarity=0.332 Sum_probs=59.6
Q ss_pred EEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCC--ccC-----CCCCeeeecC---CeEEEecCCCCCCeEEEEEEE
Q psy573 121 IIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLG--SAM-----PEDRMSVLPS---RSLQLSDVRLEDGGEYVCEAE 190 (216)
Q Consensus 121 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~-----~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~ 190 (216)
+...+....+.+|+.+.|.|.+.+. +.+.|+++. ..+ ...++..... ..|.|.+++.+|+|.|.|.+.
T Consensus 20 v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~ 97 (133)
T 3khq_A 20 IWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQK 97 (133)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEES
T ss_pred eEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEE
Confidence 4445667789999999999999876 889999873 221 1233333222 359999999999999999999
Q ss_pred cCCcc----eEEEEEEEEEeccee
Q psy573 191 NAVGK----ISASATLTVQSKYLK 210 (216)
Q Consensus 191 n~~~~----~~~~~~l~v~~~p~~ 210 (216)
|..|. ......|.|.+.|.+
T Consensus 98 n~~g~~~~~~g~gt~L~V~~~p~~ 121 (133)
T 3khq_A 98 CDSANHNVTDSCGTELLVLGFSTL 121 (133)
T ss_dssp SCC-------CCCEEEEEC-----
T ss_pred eCCCCcceeECCCEEEEEEecccc
Confidence 98752 234566777775543
No 492
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.19 E-value=1.5e-10 Score=79.49 Aligned_cols=83 Identities=22% Similarity=0.322 Sum_probs=61.6
Q ss_pred EeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCC--ccC-------------CCCCeeee---cCCeEEEecCCCCCCe
Q psy573 122 IRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLG--SAM-------------PEDRMSVL---PSRSLQLSDVRLEDGG 183 (216)
Q Consensus 122 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~-------------~~~~~~~~---~~~~l~i~~~~~~d~g 183 (216)
...+ ...+.+|+.+.|.|.+.+.+.+.+.|++.. ... ...++... ....|.|.+++.+|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (213)
T 3mj8_L 5 TQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEA 83 (213)
T ss_dssp BCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCE
Confidence 3444 678899999999999998999999999832 111 11222211 2346999999999999
Q ss_pred EEEEEEEcCCc---ceEEEEEEEEE
Q psy573 184 EYVCEAENAVG---KISASATLTVQ 205 (216)
Q Consensus 184 ~y~C~~~n~~~---~~~~~~~l~v~ 205 (216)
.|.|.+.|..+ .....+.|.|.
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 84 DYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp EEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred EEEEEeccCCcceeEEcCceEEEEe
Confidence 99999999887 34556677777
No 493
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.19 E-value=7.9e-11 Score=72.33 Aligned_cols=89 Identities=17% Similarity=0.290 Sum_probs=56.9
Q ss_pred ccceEEecCCcEEEEeeCCCCCCCCeeEEeeCCEE-----e-cc-----ccCceEEEec-----CcEEEEcccCCCCCce
Q psy573 31 PKSQRVAAGDTALLECGPPRGHPEPTLVWKKNGHP-----I-DF-----ENSKRLRLVD-----GTNLAIQDSRKTDDGR 94 (216)
Q Consensus 31 ~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~~~-----~-~~-----~~~~~~~~~~-----~~~l~i~~~~~~d~g~ 94 (216)
|..+.+.+|++++|.|.+........+.||+.... + .. ...+++.... ..+|+|.+++.+|+|.
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~ 82 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGT 82 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEE
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEE
Confidence 45678999999999999833333468999985421 1 00 0223444432 2479999999999999
Q ss_pred EEEEEEcCC-CCcccceeEEEEeecc
Q psy573 95 YQCVVKNVA-GTRESTDAVLRVLVKP 119 (216)
Q Consensus 95 y~C~~~~~~-~~~~~~~~~l~v~~~p 119 (216)
|.|.+.+.. +........+.|...|
T Consensus 83 Y~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 83 YWCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp EEEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred EEEEEecCccCccCCccEEEEEEEec
Confidence 999999864 3112233455554433
No 494
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=99.18 E-value=1.5e-12 Score=89.23 Aligned_cols=159 Identities=18% Similarity=0.267 Sum_probs=50.0
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--EE---ec-c------ccCceEEEe-----cCcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--HP---ID-F------ENSKRLRLV-----DGTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~~---~~-~------~~~~~~~~~-----~~~~l~i~~~~~ 89 (216)
+...|..+.+.+|+.++|.|.+ .+.. ..+.||+.. .. +. . ...+|+... ....|.|.+++.
T Consensus 4 v~Q~p~~v~v~~G~~v~L~C~~-s~~~-~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 81 (207)
T 1ymm_D 4 GEEDPQALSIQEGENATMNCSY-KTSI-NNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRA 81 (207)
T ss_dssp -----CCCCCSSCCCCCBCCBC-SSCE-EEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCS
T ss_pred eEECCCEEEEeCCCCEEEEEEe-cCCC-ceEEEEEECCCCCcEEEEEEcCCCccccCCCEEEEEcCCCCEEEEEECcCCc
Confidence 3344667788999999999998 4434 789999853 11 10 0 122333332 124799999999
Q ss_pred CCCceEEEEEEcCC--CC-cccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCccC-
Q psy573 90 TDDGRYQCVVKNVA--GT-RESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTVHWKRLGSAM- 159 (216)
Q Consensus 90 ~d~g~y~C~~~~~~--~~-~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~- 159 (216)
+|+|.|+|.+.+.. .. .......|.|... |.+.... ..++.+.|.|.+.+ .|.+.+....+....
T Consensus 82 ~Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~-----~~~~~vtL~C~~~gf~P~p~v~~~~~~~~~~ 156 (207)
T 1ymm_D 82 ADTASYFCATDTTSGTYKYIFGTGTRLKVLANIQNPDPAVYQLR-----DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYI 156 (207)
T ss_dssp TTCSCCEEEEEETTSCSCEEECC---------------------------------------------------------
T ss_pred ccCceEEEEEEcCCCcceeeECCCEEEEEECCCCCCCCEEEecC-----CCCCCeEEEEEccccccCCccccccccceee
Confidence 99999999998742 11 1112234555432 2222111 11247899999977 577766322111100
Q ss_pred CCCCeee--ecCCeEEEecCCCCCCeEEEEEEEcCC
Q psy573 160 PEDRMSV--LPSRSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 160 ~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
....... ...+. .+....+.++++|+|.+.+..
T Consensus 157 t~~~~~~~~~~~S~-t~~~~~w~~~~~~tC~V~~~~ 191 (207)
T 1ymm_D 157 TDKTVLDMRSMDFK-SNSAVAWSNKSDFACANAFNN 191 (207)
T ss_dssp ------------------------------------
T ss_pred cCCceecccccccc-ccchhhcCCCCceEEEEEeCC
Confidence 0000000 11222 445666677889999997754
No 495
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.18 E-value=4.1e-09 Score=76.37 Aligned_cols=153 Identities=17% Similarity=0.219 Sum_probs=93.7
Q ss_pred EecccceEEecCCcEEEEeeCCC------CCCCCeeEEeeCCEEeccccCceEEEec--CcEEEEcccCCCCCceEEEEE
Q psy573 28 RVQPKSQRVAAGDTALLECGPPR------GHPEPTLVWKKNGHPIDFENSKRLRLVD--GTNLAIQDSRKTDDGRYQCVV 99 (216)
Q Consensus 28 ~~~~~~~~~~~G~~~~l~C~~~~------~~~~~~~~W~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~C~~ 99 (216)
.+.|.+..+..|++++|.|.+.. +.|.+.+.|++++..+... ++...+ .+.|.|.++...| |.|.|.+
T Consensus 8 ~i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~---~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a 83 (303)
T 1i1r_A 8 YISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE---QYTIINRTASSVTFTDIASLN-IQLTCNI 83 (303)
T ss_dssp EEESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG---GCEEEETTEEEEEECSCCCSE-EEEEEEE
T ss_pred eEccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh---heeeeCCcEEEEEEcCcCCCc-eEEEEec
Confidence 45677788999999999999831 3477899999999987432 222222 2479999999885 9999999
Q ss_pred EcCCCCcc-cceeEEEEeecceEEeCCCceeEeCCCcEEEEEEeCCCCCcEEEEeeCCccCCCCCeeee-----------
Q psy573 100 KNVAGTRE-STDAVLRVLVKPYIIRGPKDTTVSAGSIIVFECSVGGDAVLTVHWKRLGSAMPEDRMSVL----------- 167 (216)
Q Consensus 100 ~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~----------- 167 (216)
.+...... .....+.+..+| +....|.|...+.....+.|......-....+.+.
T Consensus 84 ~~~g~~~~~~~~~~l~v~~~P-------------~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~~ 150 (303)
T 1i1r_A 84 LTFGQLEQNVYGITIISGLPP-------------EKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADC 150 (303)
T ss_dssp EETTTEEEEEEEEEEEEECCC-------------CCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCE
T ss_pred ccCCCcceEEEEEEEeccCCC-------------CCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCccC
Confidence 87422111 111222222222 33455677765555567777643211110111110
Q ss_pred -----cCCeEEEecC-CCCCCeEEEEEEEcCCcceE
Q psy573 168 -----PSRSLQLSDV-RLEDGGEYVCEAENAVGKIS 197 (216)
Q Consensus 168 -----~~~~l~i~~~-~~~d~g~y~C~~~n~~~~~~ 197 (216)
......+.++ .....-.|++.|.|..|...
T Consensus 151 ~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~ 186 (303)
T 1i1r_A 151 KAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT 186 (303)
T ss_dssp ECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEE
T ss_pred CCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcc
Confidence 1134666776 56666678899999988753
No 496
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.18 E-value=1.2e-10 Score=68.99 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=57.1
Q ss_pred ceeEeCCCcEEEEEEeCC-CCCcEEEEeeCCc----cCCCCCe---eee-cC----CeEEEecCCCCCCeEEEEEEEcCC
Q psy573 127 DTTVSAGSIIVFECSVGG-DAVLTVHWKRLGS----AMPEDRM---SVL-PS----RSLQLSDVRLEDGGEYVCEAENAV 193 (216)
Q Consensus 127 ~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~----~~~~~~~---~~~-~~----~~l~i~~~~~~d~g~y~C~~~n~~ 193 (216)
...+..|+.+.|.|.+.+ .+.|+++|.|.+. .+..... .-. .+ ..|.+.++..+|+|.|+|.|.+..
T Consensus 23 ~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~ 102 (122)
T 1xau_A 23 KHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNS 102 (122)
T ss_dssp EEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred cEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCC
Confidence 347788999999999955 6899999999663 2221111 000 11 368999999999999999999988
Q ss_pred cc-eEEEEEEEEEec
Q psy573 194 GK-ISASATLTVQSK 207 (216)
Q Consensus 194 ~~-~~~~~~l~v~~~ 207 (216)
|. .+.+..|.|.+.
T Consensus 103 g~ieSHs~ti~V~~~ 117 (122)
T 1xau_A 103 QVINSHSVTIHVRER 117 (122)
T ss_dssp EEEECCCEEEEEC--
T ss_pred CceeeeEEEEEEEee
Confidence 87 444556666653
No 497
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.18 E-value=1e-10 Score=73.38 Aligned_cols=90 Identities=20% Similarity=0.340 Sum_probs=58.1
Q ss_pred cccceEEecCCcEEEEeeCCCC---CCCCeeEEeeCCE----E--e-c-----------cccCceEEEe-----cCcEEE
Q psy573 30 QPKSQRVAAGDTALLECGPPRG---HPEPTLVWKKNGH----P--I-D-----------FENSKRLRLV-----DGTNLA 83 (216)
Q Consensus 30 ~~~~~~~~~G~~~~l~C~~~~~---~~~~~~~W~~~~~----~--~-~-----------~~~~~~~~~~-----~~~~l~ 83 (216)
.|..+.+.+|++++|.|.+... .+...+.|++.+. . + . ....+++.+. .+.+|.
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 4556789999999999986222 2467899998532 0 1 0 1113455543 235899
Q ss_pred EcccCCCCCceEEEEEEcCCCCc-ccceeEEEEeecc
Q psy573 84 IQDSRKTDDGRYQCVVKNVAGTR-ESTDAVLRVLVKP 119 (216)
Q Consensus 84 i~~~~~~d~g~y~C~~~~~~~~~-~~~~~~l~v~~~p 119 (216)
|.+++.+|+|.|.|.+.+..+.. ....+.|.|..+|
T Consensus 85 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 85 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 99999999999999999765542 2445677776654
No 498
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.18 E-value=1.2e-10 Score=73.24 Aligned_cols=91 Identities=16% Similarity=0.214 Sum_probs=60.5
Q ss_pred ceEecccceEEecCCcEEEEeeCCCCCC----CCeeEEeeCC--E---Eec-------cccCceEEEe---cCcEEEEcc
Q psy573 26 EFRVQPKSQRVAAGDTALLECGPPRGHP----EPTLVWKKNG--H---PID-------FENSKRLRLV---DGTNLAIQD 86 (216)
Q Consensus 26 ~~~~~~~~~~~~~G~~~~l~C~~~~~~~----~~~~~W~~~~--~---~~~-------~~~~~~~~~~---~~~~l~i~~ 86 (216)
.+...|..+.+.+|++++|.|.+ ...+ ...+.||+.. . .+. .....++... ...+|+|.+
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~ 81 (126)
T 4ffy_L 3 VLTQSPASLAVSLGQRATISCRA-SESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDS 81 (126)
T ss_dssp CEEEECSEEEEETTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESS
T ss_pred cEEeCCCeEEEeCCCCEEEEEec-CCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECC
Confidence 45556777899999999999998 4444 5679999842 1 111 0112344332 234799999
Q ss_pred cCCCCCceEEEEEEcCCCCcccceeEEEEee
Q psy573 87 SRKTDDGRYQCVVKNVAGTRESTDAVLRVLV 117 (216)
Q Consensus 87 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 117 (216)
++.+|+|.|.|.+.+...........|.|..
T Consensus 82 v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~ 112 (126)
T 4ffy_L 82 VETDDAATYYCQQNNEDPYTFGGGTKLEIKG 112 (126)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CCHHHCEEEEEEEecCCCcEECCCEEEEEec
Confidence 9999999999999875433233345566654
No 499
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=99.18 E-value=9.4e-11 Score=79.44 Aligned_cols=118 Identities=14% Similarity=0.166 Sum_probs=74.6
Q ss_pred eEecccceEEecCCcEEEEeeCCCCCCCCeeEEeeCC--E---Eec-------cccCceEEEec-----CcEEEEcccCC
Q psy573 27 FRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKKNG--H---PID-------FENSKRLRLVD-----GTNLAIQDSRK 89 (216)
Q Consensus 27 ~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~~~--~---~~~-------~~~~~~~~~~~-----~~~l~i~~~~~ 89 (216)
+...|..+.+.+|+.++|.|.+ .+.....+.||+.. . .+. ....+++.... ...|+|.+++.
T Consensus 4 v~Q~p~~v~v~~G~~v~L~C~~-s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 82 (194)
T 1lp9_E 4 VTQTEGLVTLTEGLPVMLNCTY-QSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQL 82 (194)
T ss_dssp EEECCSEEEEETTSCEEECEEE-ECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCG
T ss_pred cEecCCEEEEecCCCEEEEEEe-CCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCc
Confidence 4455778899999999999987 44445679999853 2 111 01234555431 24799999999
Q ss_pred CCCceEEEEEEcC---CCC-cccceeEEEEeec-----ceEEeCCCceeEeCCCcEEEEEEeCC-CCCcEE
Q psy573 90 TDDGRYQCVVKNV---AGT-RESTDAVLRVLVK-----PYIIRGPKDTTVSAGSIIVFECSVGG-DAVLTV 150 (216)
Q Consensus 90 ~d~g~y~C~~~~~---~~~-~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i 150 (216)
+|+|.|.|.+.+. ... .......|.|... |.+.... ...+.+.|.|.+.+ .|.+.+
T Consensus 83 ~Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~-----~~~~~~tL~Cl~~gf~P~~~V 148 (194)
T 1lp9_E 83 SDSALYYCALFLASSSFSKLVFGQGTSLSVVPNIQNPEPAVYQLK-----DPRSQDSTLCLFTDFDSQINV 148 (194)
T ss_dssp GGCEEEEEEEEECSSSSCEEEECCCEEEEEECCCSSCCCEEEEEE-----CTTSSSCEEEEEESCCTTSCC
T ss_pred ccCeeEEEEEecccCCcceeeeccCceEEecCcCCCCCCeeEecC-----CCCCCcEEEEEeecccCCccc
Confidence 9999999999863 111 1112345666532 2222111 11236899999987 577766
No 500
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.18 E-value=1.2e-10 Score=81.81 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=62.9
Q ss_pred cceEecccceEEecCCcEEEEeeCCCCCCCCeeEEee--CCEEec----------cccCceEEEec---CcEEEEcccCC
Q psy573 25 EEFRVQPKSQRVAAGDTALLECGPPRGHPEPTLVWKK--NGHPID----------FENSKRLRLVD---GTNLAIQDSRK 89 (216)
Q Consensus 25 ~~~~~~~~~~~~~~G~~~~l~C~~~~~~~~~~~~W~~--~~~~~~----------~~~~~~~~~~~---~~~l~i~~~~~ 89 (216)
+.+...+....+.+|+.++|.|.+ .+.+.+.+.||+ ++..+. .....++.... ..+|.|.+++.
T Consensus 136 ~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 214 (247)
T 2ghw_B 136 TTLTQSPATLSLSPGERATLSCRA-SQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP 214 (247)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG
T ss_pred eEEEccCCEEEecCCCcEEEEEEe-CCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH
Confidence 345556667789999999999998 677778999999 444321 01123343332 23699999999
Q ss_pred CCCceEEEEEEcCCCCcccceeEEEEe
Q psy573 90 TDDGRYQCVVKNVAGTRESTDAVLRVL 116 (216)
Q Consensus 90 ~d~g~y~C~~~~~~~~~~~~~~~l~v~ 116 (216)
+|+|.|+|.+.+...........|.|.
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999999999987544333444555554
Done!