Your job contains 1 sequence.
>psy5731
MWLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYR
QAAVAAAAVSTLQKPLAYRLYPGVPATANASHSLSPPGLAATSLSSISSYYNNLNLTRSC
SPDNAMGGSRGSHTPDSQPESVDVEESSNDSPSNNKIDV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5731
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011758 - symbol:B-H1 "BarH1" species:7227 "Drosop... 246 4.0e-20 1
FB|FBgn0004854 - symbol:B-H2 "BarH2" species:7227 "Drosop... 227 6.6e-18 1
MGI|MGI:1859288 - symbol:Barhl1 "BarH-like 1 (Drosophila)... 161 2.1e-11 1
RGD|620648 - symbol:Barhl1 "BarH-like homeobox 1" species... 161 2.1e-11 1
ZFIN|ZDB-GENE-060118-2 - symbol:barhl1b "BarH-like 1b" sp... 156 7.2e-11 1
UNIPROTKB|E2QSL9 - symbol:BARHL1 "Uncharacterized protein... 156 7.5e-11 1
UNIPROTKB|Q9BZE3 - symbol:BARHL1 "BarH-like 1 homeobox pr... 156 7.5e-11 1
UNIPROTKB|F1S0T9 - symbol:BARHL1 "Uncharacterized protein... 156 7.5e-11 1
UNIPROTKB|E1B9T6 - symbol:BARHL1 "Uncharacterized protein... 156 8.1e-11 1
UNIPROTKB|Q9NY43 - symbol:BARHL2 "BarH-like 2 homeobox pr... 156 1.1e-10 1
UNIPROTKB|F1N4U7 - symbol:BARHL2 "Uncharacterized protein... 155 1.4e-10 1
UNIPROTKB|F1S4E7 - symbol:BARHL2 "Uncharacterized protein... 155 1.4e-10 1
MGI|MGI:1859314 - symbol:Barhl2 "BarH-like 2 (Drosophila)... 155 1.4e-10 1
RGD|620726 - symbol:Barhl2 "BarH-like homeobox 2" species... 155 1.4e-10 1
UNIPROTKB|F1PIC9 - symbol:BARHL2 "Uncharacterized protein... 154 2.0e-10 1
ZFIN|ZDB-GENE-050913-153 - symbol:barhl2 "BarH-like 2" sp... 151 3.5e-10 1
ZFIN|ZDB-GENE-050417-212 - symbol:barhl1a "BarH-like 1a" ... 141 2.7e-09 1
WB|WBGene00000452 - symbol:ceh-31 species:6239 "Caenorhab... 100 6.9e-05 1
WB|WBGene00000451 - symbol:ceh-30 species:6239 "Caenorhab... 92 0.00044 1
UNIPROTKB|Q22909 - symbol:ceh-30 "Homeobox protein ceh-30... 92 0.00044 1
>FB|FBgn0011758 [details] [associations]
symbol:B-H1 "BarH1" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0007455 "eye-antennal disc morphogenesis" evidence=IMP]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IGI;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003677 EMBL:AE014298
GO:GO:0007601 GO:GO:0043565 GO:GO:0050896 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
EMBL:M73079 EMBL:M73259 EMBL:M73078 EMBL:AY058309 PIR:B39369
RefSeq:NP_523387.1 UniGene:Dm.2610 ProteinModelPortal:Q24255
SMR:Q24255 DIP:DIP-19778N MINT:MINT-881308 STRING:Q24255
EnsemblMetazoa:FBtr0074430 GeneID:32724 KEGG:dme:Dmel_CG5529
CTD:32724 FlyBase:FBgn0011758 eggNOG:NOG263484 InParanoid:Q24255
KO:K09360 OMA:RFMINDI PhylomeDB:Q24255 GenomeRNAi:32724
NextBio:780048 Bgee:Q24255 GermOnline:CG5529 GO:GO:0008052
Uniprot:Q24255
Length = 544
Score = 246 (91.7 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 52/91 (57%), Positives = 58/91 (63%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTY-GCWPYQGG-----GTTQPSAA 55
W RTKWKRQTAVGLELLAEAGN+AAFQRLYGG Y G WPY G T +
Sbjct: 346 WYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNI 405
Query: 56 DLYYRQXXXXXXXXSTLQKPLAYRLYPGVPA 86
D+YYRQ + +QKPL Y LY GVP+
Sbjct: 406 DIYYRQAAAA----AAMQKPLPYNLYAGVPS 432
>FB|FBgn0004854 [details] [associations]
symbol:B-H2 "BarH2" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016055
GO:GO:0003677 EMBL:AE014298 GO:GO:0007601 GO:GO:0043565
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
GO:GO:0046331 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 GO:GO:0008052 EMBL:M82884 EMBL:M82887 EMBL:M82885
EMBL:M82886 EMBL:BT022144 PIR:A41726 PIR:S27806 RefSeq:NP_523386.1
UniGene:Dm.2611 ProteinModelPortal:Q24256 SMR:Q24256 STRING:Q24256
EnsemblMetazoa:FBtr0074429 GeneID:32723 KEGG:dme:Dmel_CG5488
UCSC:CG5488-RA CTD:32723 FlyBase:FBgn0004854 InParanoid:Q24256
OMA:ANKLELS OrthoDB:EOG4R22BQ PhylomeDB:Q24256 ChiTaRS:B-H2
GenomeRNAi:32723 NextBio:780043 Bgee:Q24256 GermOnline:CG5488
Uniprot:Q24256
Length = 645
Score = 227 (85.0 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 52/105 (49%), Positives = 58/105 (55%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPT-Y-GCWPYQGGGTTQ------PS 53
W RTKWKRQTAVGLELLAEAGNYAAFQRLYGG T Y WPY Q PS
Sbjct: 427 WYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPS 486
Query: 54 AADLYYRQXXXXXXXXSTLQKPLAYRLYPG-VPATANASHSLSPP 97
A D+YYRQ P +YR+Y +P + +PP
Sbjct: 487 AIDIYYRQAAAAAAMQKP-SLPASYRMYQSSIPPGMSLPGMPAPP 530
>MGI|MGI:1859288 [details] [associations]
symbol:Barhl1 "BarH-like 1 (Drosophila)" species:10090 "Mus
musculus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0030901 "midbrain development"
evidence=IMP] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1859288 GO:GO:0005634
GO:GO:0001764 GO:GO:0043565 GO:GO:0043524 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077
GO:GO:0007605 GO:GO:0030901 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 KO:K09360 CTD:56751 HOGENOM:HOG000231533
HOVERGEN:HBG050663 OMA:DCLETGA OrthoDB:EOG4F4SBJ EMBL:AJ237590
EMBL:AB043980 EMBL:AF264026 EMBL:BC055731 IPI:IPI00122197
RefSeq:NP_001157658.1 RefSeq:NP_062319.1 UniGene:Mm.21390
ProteinModelPortal:P63157 SMR:P63157 STRING:P63157
PhosphoSite:P63157 PRIDE:P63157 Ensembl:ENSMUST00000050776
Ensembl:ENSMUST00000113847 Ensembl:ENSMUST00000113849 GeneID:54422
KEGG:mmu:54422 InParanoid:P63157 NextBio:311296 Bgee:P63157
CleanEx:MM_BARHL1 Genevestigator:P63157
GermOnline:ENSMUSG00000026805 Uniprot:P63157
Length = 327
Score = 161 (61.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/100 (43%), Positives = 52/100 (52%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 225 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 281
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP-PGL 99
LQ+PL R L G+ + L P PG+
Sbjct: 282 --GPSAPPPALQRPLVPRILIHGLQGASEPPPPLPPLPGV 319
>RGD|620648 [details] [associations]
symbol:Barhl1 "BarH-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007605 "sensory perception of
sound" evidence=IEA;ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:620648 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 eggNOG:NOG263484 KO:K09360 CTD:56751
HOGENOM:HOG000231533 HOVERGEN:HBG050663 OMA:DCLETGA
OrthoDB:EOG4F4SBJ EMBL:AB043981 IPI:IPI00201978 RefSeq:NP_476450.1
UniGene:Rn.162655 ProteinModelPortal:P63156 SMR:P63156
Ensembl:ENSRNOT00000017725 GeneID:117232 KEGG:rno:117232
UCSC:RGD:620648 InParanoid:P63156 NextBio:620058
Genevestigator:P63156 GermOnline:ENSRNOG00000013209 Uniprot:P63156
Length = 327
Score = 161 (61.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/100 (43%), Positives = 52/100 (52%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 225 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 281
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP-PGL 99
LQ+PL R L G+ + L P PG+
Sbjct: 282 --GPSAPPPALQRPLVPRILIHGLQGASEPPPPLPPLPGV 319
>ZFIN|ZDB-GENE-060118-2 [details] [associations]
symbol:barhl1b "BarH-like 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-060118-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09360 HOVERGEN:HBG050663 EMBL:AY596176 IPI:IPI00511307
RefSeq:NP_001018142.1 UniGene:Dr.88513 ProteinModelPortal:Q53B64
SMR:Q53B64 GeneID:553186 KEGG:dre:553186 CTD:553186
InParanoid:Q53B64 NextBio:20879985 Uniprot:Q53B64
Length = 323
Score = 156 (60.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 41/96 (42%), Positives = 49/96 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 221 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 277
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP 96
LQ+PL R L G+ + L P
Sbjct: 278 --GPSAPPPALQRPLVPRILLHGLQGASEPPPPLPP 311
>UNIPROTKB|E2QSL9 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
GO:GO:0043524 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 KO:K09360 CTD:56751 OMA:DCLETGA
EMBL:AAEX03006814 RefSeq:XP_548404.3 Ensembl:ENSCAFT00000031649
GeneID:491283 KEGG:cfa:491283 NextBio:20864157 Uniprot:E2QSL9
Length = 327
Score = 156 (60.0 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 41/96 (42%), Positives = 49/96 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 225 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 281
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP 96
LQ+PL R L G+ + L P
Sbjct: 282 --GPSAPPPALQRPLVPRILIHGLQGASEPPPPLPP 315
>UNIPROTKB|Q9BZE3 [details] [associations]
symbol:BARHL1 "BarH-like 1 homeobox protein" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
EMBL:CH471090 GO:GO:0043524 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0007605
GO:GO:0030901 eggNOG:NOG263484 KO:K09360 EMBL:AF325688
EMBL:AF321618 EMBL:AK054797 EMBL:AL354735 EMBL:BC136956
EMBL:BC136969 EMBL:AJ237816 IPI:IPI00024060 RefSeq:NP_064448.1
UniGene:Hs.283809 ProteinModelPortal:Q9BZE3 SMR:Q9BZE3
STRING:Q9BZE3 PhosphoSite:Q9BZE3 DMDM:29336920 PaxDb:Q9BZE3
PRIDE:Q9BZE3 Ensembl:ENST00000263610 Ensembl:ENST00000542090
GeneID:56751 KEGG:hsa:56751 UCSC:uc004cbp.1 CTD:56751
GeneCards:GC09P135457 HGNC:HGNC:953 HPA:HPA004809 MIM:605211
neXtProt:NX_Q9BZE3 PharmGKB:PA25257 HOGENOM:HOG000231533
HOVERGEN:HBG050663 InParanoid:Q9BZE3 OMA:DCLETGA OrthoDB:EOG4F4SBJ
PhylomeDB:Q9BZE3 GenomeRNAi:56751 NextBio:62212 ArrayExpress:Q9BZE3
Bgee:Q9BZE3 CleanEx:HS_BARHL1 Genevestigator:Q9BZE3
GermOnline:ENSG00000125492 Uniprot:Q9BZE3
Length = 327
Score = 156 (60.0 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 41/96 (42%), Positives = 49/96 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 225 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 281
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP 96
LQ+PL R L G+ + L P
Sbjct: 282 --GPSAPPPALQRPLVPRILIHGLQGASEPPPPLPP 315
>UNIPROTKB|F1S0T9 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 KO:K09360 CTD:56751 OMA:DCLETGA
EMBL:CU326339 RefSeq:XP_001929470.1 Ensembl:ENSSSCT00000006301
GeneID:100152288 KEGG:ssc:100152288 Uniprot:F1S0T9
Length = 327
Score = 156 (60.0 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 41/96 (42%), Positives = 49/96 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 225 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 281
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP 96
LQ+PL R L G+ + L P
Sbjct: 282 --GPSAPPPALQRPLVPRILIHGLQGASEPPPPLPP 315
>UNIPROTKB|E1B9T6 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 OMA:DCLETGA EMBL:DAAA02032283
IPI:IPI00687480 Ensembl:ENSBTAT00000032657 Uniprot:E1B9T6
Length = 337
Score = 156 (60.0 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 41/96 (42%), Positives = 49/96 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P AA YR
Sbjct: 235 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGAALYLYR- 291
Query: 62 XXXXXXXXSTLQKPLAYR-LYPGVPATANASHSLSP 96
LQ+PL R L G+ + L P
Sbjct: 292 --GPSAPPPALQRPLVPRILIHGLQGASEPPPPLPP 325
>UNIPROTKB|Q9NY43 [details] [associations]
symbol:BARHL2 "BarH-like 2 homeobox protein" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0030516 "regulation of axon
extension" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0030182 GO:GO:0043565
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0030516 GO:GO:0045727 GO:GO:0001709
eggNOG:NOG263484 KO:K09360 HOGENOM:HOG000231533 HOVERGEN:HBG050663
EMBL:AY338397 EMBL:BC126439 EMBL:BC126441 EMBL:AJ251753
IPI:IPI00059055 RefSeq:NP_064447.1 UniGene:Hs.451956
ProteinModelPortal:Q9NY43 SMR:Q9NY43 STRING:Q9NY43
PhosphoSite:Q9NY43 DMDM:47117915 PaxDb:Q9NY43 PRIDE:Q9NY43
Ensembl:ENST00000370445 GeneID:343472 KEGG:hsa:343472
UCSC:uc001dns.3 CTD:343472 GeneCards:GC01M091177 HGNC:HGNC:954
HPA:HPA028176 MIM:605212 neXtProt:NX_Q9NY43 PharmGKB:PA25258
InParanoid:Q9NY43 OMA:ISVTMEH OrthoDB:EOG4KH2VD BRENDA:3.1.30.1
GenomeRNAi:343472 NextBio:98538 Bgee:Q9NY43 CleanEx:HS_BARHL2
Genevestigator:Q9NY43 Uniprot:Q9NY43
Length = 387
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 45/102 (44%), Positives = 53/102 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 279 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGSMDSTTAAAAAAAM 337
Query: 58 YYRQXXXXXXXXSTLQKPLAYR-LYPGV-PATANASHSLSPP 97
Y LQ+PL R L G+ P A + LS P
Sbjct: 338 YSSMYRTPPAPHPQLQRPLVPRVLIHGLGPGGQPALNPLSSP 379
>UNIPROTKB|F1N4U7 [details] [associations]
symbol:BARHL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045727 "positive
regulation of translation" evidence=IEA] [GO:0030516 "regulation of
axon extension" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0001764
GO:GO:0030182 GO:GO:0043565 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030516
GO:GO:0045727 GO:GO:0001709 GeneTree:ENSGT00700000104206 KO:K09360
CTD:343472 OMA:ISVTMEH EMBL:DAAA02007925 IPI:IPI00693131
RefSeq:NP_001179226.1 UniGene:Bt.87288 Ensembl:ENSBTAT00000007796
GeneID:539708 KEGG:bta:539708 NextBio:20878169 Uniprot:F1N4U7
Length = 380
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/102 (44%), Positives = 53/102 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 272 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGSMDSTTAAAAAAAM 330
Query: 58 YYRQXXXXXXXXSTLQKPLAYR-LYPGV-PATANASHSLSPP 97
Y LQ+PL R L G+ P A + LS P
Sbjct: 331 YSSMYRTPPAPHPQLQRPLVPRVLIHGLGPGGQPALNPLSNP 372
>UNIPROTKB|F1S4E7 [details] [associations]
symbol:BARHL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045727 "positive
regulation of translation" evidence=IEA] [GO:0030516 "regulation of
axon extension" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0001764
GO:GO:0030182 GO:GO:0043565 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030516
GO:GO:0045727 GO:GO:0001709 GeneTree:ENSGT00700000104206
OMA:ISVTMEH EMBL:CU693425 Ensembl:ENSSSCT00000007572 Uniprot:F1S4E7
Length = 384
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/102 (44%), Positives = 53/102 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 276 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGSMDSTTAAAAAAAM 334
Query: 58 YYRQXXXXXXXXSTLQKPLAYR-LYPGV-PATANASHSLSPP 97
Y LQ+PL R L G+ P A + LS P
Sbjct: 335 YSSMYRTPPAPHPQLQRPLVPRVLIHGLGPGGQPALNPLSNP 376
>MGI|MGI:1859314 [details] [associations]
symbol:Barhl2 "BarH-like 2 (Drosophila)" species:10090 "Mus
musculus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001709 "cell fate determination" evidence=IMP] [GO:0001764
"neuron migration" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=IDA;IMP] [GO:0030516 "regulation
of axon extension" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IDA] [GO:0045727 "positive regulation of translation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1859314 GO:GO:0005634
GO:GO:0001764 GO:GO:0030182 GO:GO:0043565 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077
GO:GO:0030516 GO:GO:0045727 GO:GO:0001709
GeneTree:ENSGT00700000104206 eggNOG:NOG263484 KO:K09360
HOGENOM:HOG000231533 HOVERGEN:HBG050663 CTD:343472 OMA:ISVTMEH
EMBL:BC078444 EMBL:AB063281 IPI:IPI00605783 RefSeq:NP_001005477.1
UniGene:Mm.271593 ProteinModelPortal:Q8VIB5 SMR:Q8VIB5
STRING:Q8VIB5 PhosphoSite:Q8VIB5 PRIDE:Q8VIB5
Ensembl:ENSMUST00000086795 GeneID:104382 KEGG:mmu:104382
UCSC:uc008ylm.1 InParanoid:Q8VIB5 NextBio:357037 Bgee:Q8VIB5
CleanEx:MM_BARHL2 Genevestigator:Q8VIB5
GermOnline:ENSMUSG00000034384 Uniprot:Q8VIB5
Length = 384
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/102 (44%), Positives = 53/102 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 276 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGSMDSTTAAAAAAAM 334
Query: 58 YYRQXXXXXXXXSTLQKPLAYR-LYPGV-PATANASHSLSPP 97
Y LQ+PL R L G+ P A + LS P
Sbjct: 335 YSSMYRTPPAPHPQLQRPLVPRVLIHGLGPGGQPALNPLSNP 376
>RGD|620726 [details] [associations]
symbol:Barhl2 "BarH-like homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001709 "cell fate determination" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=IEA;ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007399 "nervous system development" evidence=IDA] [GO:0030182
"neuron differentiation" evidence=IEA;ISO] [GO:0030516 "regulation
of axon extension" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045664 "regulation of neuron differentiation"
evidence=TAS] [GO:0045727 "positive regulation of translation"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:620726 GO:GO:0005634
GO:GO:0001764 GO:GO:0045664 GO:GO:0030182 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030516
GO:GO:0045727 GO:GO:0001709 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 KO:K09360 HOGENOM:HOG000231533 HOVERGEN:HBG050663
CTD:343472 OMA:ISVTMEH EMBL:AB004056 IPI:IPI00206550
RefSeq:NP_075245.1 UniGene:Rn.30005 ProteinModelPortal:O88181
SMR:O88181 STRING:O88181 Ensembl:ENSRNOT00000002887 GeneID:65050
KEGG:rno:65050 UCSC:RGD:620726 InParanoid:O88181 NextBio:613896
Genevestigator:O88181 GermOnline:ENSRNOG00000002117 Uniprot:O88181
Length = 384
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/102 (44%), Positives = 53/102 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 276 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGSMDSTTAAAAAAAM 334
Query: 58 YYRQXXXXXXXXSTLQKPLAYR-LYPGV-PATANASHSLSPP 97
Y LQ+PL R L G+ P A + LS P
Sbjct: 335 YSSMYRTPPAPHPQLQRPLVPRVLIHGLGPGGQPALNPLSNP 376
>UNIPROTKB|F1PIC9 [details] [associations]
symbol:BARHL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0030516
"regulation of axon extension" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001709 "cell fate determination" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0030182 GO:GO:0043565
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0030516 GO:GO:0045727 GO:GO:0001709
GeneTree:ENSGT00700000104206 OMA:ISVTMEH EMBL:AAEX03004827
EMBL:AAEX03004828 Ensembl:ENSCAFT00000032163 Uniprot:F1PIC9
Length = 397
Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 45/102 (44%), Positives = 53/102 (51%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 289 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGSMDSTTAAAAAAAM 347
Query: 58 YYRQXXXXXXXXSTLQKPLAYR-LYPGV-PATANASHSLSPP 97
Y LQ+PL R L G+ P A + LS P
Sbjct: 348 YSSMYRTPPAPHPQLQRPLVPRVLIHGLGPRGQPALNPLSNP 389
>ZFIN|ZDB-GENE-050913-153 [details] [associations]
symbol:barhl2 "BarH-like 2" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050913-153
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P10037
GeneTree:ENSGT00700000104206 KO:K09360 HOVERGEN:HBG050663
CTD:343472 OMA:ISVTMEH EMBL:BX004768 EMBL:AY145141 IPI:IPI00487796
RefSeq:NP_991303.1 UniGene:Dr.79590 SMR:Q6YI96 STRING:Q6YI96
Ensembl:ENSDART00000102661 GeneID:100001699 KEGG:dre:100001699
InParanoid:Q6YI96 NextBio:20785141 Uniprot:Q6YI96
Length = 364
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 38/83 (45%), Positives = 46/83 (55%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGG----TTQPSAADL 57
W RTKWKRQTAVGLELLAEAGNY+A QR++ P Y P G T +AA +
Sbjct: 256 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP-YFYHPSLLGTVDSTTAAAAAAAM 314
Query: 58 YYRQXXXXXXXXSTLQKPLAYRL 80
Y +LQ+PL R+
Sbjct: 315 YSSMYRTPSTPHPSLQRPLVPRV 337
>ZFIN|ZDB-GENE-050417-212 [details] [associations]
symbol:barhl1a "BarH-like 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050417-212
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 HOVERGEN:HBG050663 EMBL:BX276128
EMBL:AY596187 IPI:IPI00627489 UniGene:Dr.110809 SMR:Q53B63
Ensembl:ENSDART00000051474 OMA:PERIPKK Uniprot:Q53B63
Length = 299
Score = 141 (54.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 34/79 (43%), Positives = 42/79 (53%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTYGCWPYQGGGTTQPSAADLYYRQ 61
W RTKWKRQTAVGLELLAEAGNY+A QR++ P + +P P YR
Sbjct: 202 WYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF--YPQSLVSNLDPGPGLYLYR- 258
Query: 62 XXXXXXXXSTLQKPLAYRL 80
+Q+PL R+
Sbjct: 259 --GPSAPPPPVQRPLVPRI 275
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 100 (40.3 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRL 33
W RTKWKRQ +VG++LL +AGN AA Q+L
Sbjct: 141 WYQNRRTKWKRQASVGMDLLHDAGNMAAVQQL 172
>WB|WBGene00000451 [details] [associations]
symbol:ceh-30 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTY 39
W RTKWKRQ G++LL+E GN +A Q L Y
Sbjct: 142 WYQNRRTKWKRQATSGMDLLSEPGNLSAVQNLIRSSPY 179
>UNIPROTKB|Q22909 [details] [associations]
symbol:ceh-30 "Homeobox protein ceh-30" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0007548 "sex differentiation" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 2 WLTAVRTKWKRQTAVGLELLAEAGNYAAFQRLYGGPTY 39
W RTKWKRQ G++LL+E GN +A Q L Y
Sbjct: 142 WYQNRRTKWKRQATSGMDLLSEPGNLSAVQNLIRSSPY 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 120 0.00091 102 3 11 23 0.41 31
29 0.48 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 557 (59 KB)
Total size of DFA: 130 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.70u 0.10s 10.80t Elapsed: 00:00:04
Total cpu time: 10.70u 0.10s 10.80t Elapsed: 00:00:04
Start: Thu Aug 15 10:51:31 2013 End: Thu Aug 15 10:51:35 2013