Query psy5735
Match_columns 247
No_of_seqs 209 out of 1350
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 16:41:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 100.0 6.7E-31 2.3E-35 249.2 14.8 190 8-236 165-367 (490)
2 3qww_A SET and MYND domain-con 100.0 1.6E-30 5.6E-35 243.1 14.7 188 10-236 169-356 (433)
3 3qwp_A SET and MYND domain-con 100.0 8.1E-30 2.8E-34 238.0 11.5 176 11-236 170-345 (429)
4 3rq4_A Histone-lysine N-methyl 99.6 1.6E-16 5.4E-21 137.9 2.1 82 21-122 155-238 (247)
5 3s8p_A Histone-lysine N-methyl 99.5 1.3E-14 4.5E-19 127.3 3.3 62 46-119 202-264 (273)
6 1n3j_A A612L, histone H3 lysin 99.4 8.6E-14 3E-18 107.7 4.4 53 42-94 57-111 (119)
7 2w5y_A Histone-lysine N-methyl 99.2 7.5E-12 2.6E-16 104.7 5.6 59 49-118 124-188 (192)
8 3f9x_A Histone-lysine N-methyl 99.1 1.8E-11 6.1E-16 99.6 2.7 54 49-104 107-164 (166)
9 3ooi_A Histone-lysine N-methyl 99.1 6.2E-11 2.1E-15 101.9 5.1 62 42-115 157-223 (232)
10 3ope_A Probable histone-lysine 99.1 6.2E-11 2.1E-15 101.2 4.3 63 42-115 138-205 (222)
11 3h6l_A Histone-lysine N-methyl 99.0 2.8E-10 9.6E-15 100.3 5.5 62 42-115 182-248 (278)
12 3hna_A Histone-lysine N-methyl 99.0 3.1E-10 1.1E-14 100.5 4.5 66 40-115 206-280 (287)
13 1ml9_A Histone H3 methyltransf 99.0 3.6E-10 1.2E-14 100.7 4.4 52 42-93 212-272 (302)
14 1mvh_A Cryptic LOCI regulator 98.9 1.7E-09 5.9E-14 96.2 5.2 52 42-93 205-265 (299)
15 3smt_A Histone-lysine N-methyl 98.8 2.6E-09 8.8E-14 101.2 5.7 88 11-113 241-329 (497)
16 2r3a_A Histone-lysine N-methyl 98.8 3.8E-09 1.3E-13 94.0 6.0 44 49-92 215-266 (300)
17 2f69_A Histone-lysine N-methyl 98.8 2.3E-09 8E-14 93.6 4.2 44 49-92 186-234 (261)
18 3bo5_A Histone-lysine N-methyl 98.8 3.4E-09 1.2E-13 93.9 5.0 52 42-93 197-254 (290)
19 2qpw_A PR domain zinc finger p 98.8 3.9E-09 1.3E-13 84.8 4.8 44 50-93 100-146 (149)
20 3qxy_A N-lysine methyltransfer 98.8 3.1E-09 1.1E-13 99.5 4.7 64 41-112 214-277 (449)
21 1h3i_A Histone H3 lysine 4 spe 98.8 2.1E-09 7.3E-14 95.1 3.0 43 50-92 241-288 (293)
22 2h21_A Ribulose-1,5 bisphospha 98.4 2.2E-07 7.6E-12 86.4 6.2 64 43-113 183-257 (440)
23 3db5_A PR domain zinc finger p 98.1 1.8E-06 6.2E-11 69.2 4.5 45 49-93 97-144 (151)
24 3ep0_A PR domain zinc finger p 98.0 5E-06 1.7E-10 67.9 4.5 44 50-93 102-148 (170)
25 3dal_A PR domain zinc finger p 97.8 1.2E-05 4.1E-10 67.1 3.7 43 50-92 132-177 (196)
26 3ihx_A PR domain zinc finger p 97.6 2.8E-05 9.6E-10 62.3 3.3 43 50-92 97-142 (152)
27 3ray_A PR domain-containing pr 97.4 7.2E-05 2.5E-09 64.0 3.7 43 50-92 141-186 (237)
28 3n71_A Histone lysine methyltr 78.9 3.1 0.00011 38.7 6.2 56 180-235 395-450 (490)
29 2w2u_A Hypothetical P60 katani 75.8 2.9 0.0001 29.4 3.8 39 174-212 15-53 (83)
30 3qwp_A SET and MYND domain-con 75.8 4.5 0.00015 36.8 6.2 56 179-234 372-427 (429)
31 2v6y_A AAA family ATPase, P60 74.8 3.1 0.00011 29.2 3.7 38 175-212 8-45 (83)
32 3qww_A SET and MYND domain-con 73.3 6 0.0002 36.1 6.3 56 181-236 343-398 (433)
33 3rkv_A Putative peptidylprolyl 73.1 8 0.00027 28.7 6.2 62 175-236 8-79 (162)
34 1wfd_A Hypothetical protein 15 64.4 6.9 0.00024 28.0 3.8 38 175-212 12-49 (93)
35 4gco_A Protein STI-1; structur 64.4 15 0.00052 26.4 5.9 26 181-206 16-41 (126)
36 2v6x_A Vacuolar protein sortin 63.5 7.2 0.00025 27.2 3.7 39 174-212 9-47 (85)
37 3upv_A Heat shock protein STI1 63.2 21 0.00073 24.8 6.4 48 181-236 41-88 (126)
38 2cpt_A SKD1 protein, vacuolar 63.2 6.8 0.00023 29.3 3.7 38 175-212 15-52 (117)
39 3mv2_A Coatomer subunit alpha; 63.0 16 0.00054 32.3 6.5 52 181-232 117-168 (325)
40 2l6j_A TPR repeat-containing p 62.6 17 0.00059 24.3 5.7 57 180-241 40-99 (111)
41 3mkr_B Coatomer subunit alpha; 62.0 17 0.00057 32.1 6.5 52 181-232 105-156 (320)
42 2v5f_A Prolyl 4-hydroxylase su 61.8 30 0.001 24.0 7.0 57 180-237 7-63 (104)
43 2hr2_A Hypothetical protein; a 60.7 9.3 0.00032 30.1 4.3 39 172-210 5-43 (159)
44 1vq8_Z 50S ribosomal protein L 58.7 2.9 9.9E-05 29.6 0.8 31 132-166 25-55 (83)
45 3edt_B KLC 2, kinesin light ch 58.2 24 0.00083 27.6 6.6 56 181-236 130-185 (283)
46 4gcn_A Protein STI-1; structur 57.6 24 0.00081 25.3 5.9 22 185-206 15-36 (127)
47 3edt_B KLC 2, kinesin light ch 57.4 20 0.00067 28.2 5.9 56 181-236 88-143 (283)
48 2xev_A YBGF; tetratricopeptide 55.9 32 0.0011 23.6 6.3 51 181-236 42-92 (129)
49 2dba_A Smooth muscle cell asso 55.6 29 0.001 24.3 6.1 22 184-205 34-55 (148)
50 3qky_A Outer membrane assembly 53.2 32 0.0011 27.4 6.6 52 179-235 16-67 (261)
51 2xev_A YBGF; tetratricopeptide 52.9 36 0.0012 23.4 6.1 51 181-236 5-55 (129)
52 2fbn_A 70 kDa peptidylprolyl i 52.4 51 0.0017 25.0 7.4 32 177-208 37-68 (198)
53 3sz7_A HSC70 cochaperone (SGT) 51.6 39 0.0013 24.8 6.4 47 182-236 49-95 (164)
54 1elw_A TPR1-domain of HOP; HOP 51.5 40 0.0014 22.2 6.0 48 181-236 41-88 (118)
55 3vtx_A MAMA; tetratricopeptide 51.0 26 0.00088 26.1 5.3 47 181-235 8-54 (184)
56 3nf1_A KLC 1, kinesin light ch 49.6 34 0.0012 27.3 6.2 56 181-236 30-85 (311)
57 3ma5_A Tetratricopeptide repea 48.9 32 0.0011 23.3 5.1 27 181-207 10-36 (100)
58 3nf1_A KLC 1, kinesin light ch 48.6 44 0.0015 26.6 6.8 55 182-236 157-211 (311)
59 1wvo_A Sialic acid synthase; a 48.5 8 0.00027 26.8 1.7 18 71-88 8-25 (79)
60 2yhc_A BAMD, UPF0169 lipoprote 48.3 40 0.0014 26.4 6.3 47 185-236 48-94 (225)
61 4a5x_A MITD1, MIT domain-conta 47.8 17 0.00059 25.5 3.5 35 178-212 16-50 (86)
62 1a17_A Serine/threonine protei 42.4 76 0.0026 22.5 6.7 44 185-236 54-97 (166)
63 2gw1_A Mitochondrial precursor 41.6 53 0.0018 28.5 6.5 26 181-206 9-34 (514)
64 2kc7_A BFR218_protein; tetratr 41.5 48 0.0016 21.7 5.1 19 188-206 10-28 (99)
65 4gcn_A Protein STI-1; structur 41.3 63 0.0021 22.9 6.0 57 179-236 43-99 (127)
66 3q49_B STIP1 homology and U bo 41.3 70 0.0024 22.0 6.2 50 179-236 44-93 (137)
67 1pft_A TFIIB, PFTFIIBN; N-term 40.1 11 0.00039 23.3 1.3 30 134-167 5-35 (50)
68 3k9i_A BH0479 protein; putativ 40.0 85 0.0029 21.4 6.4 27 181-207 30-56 (117)
69 3urz_A Uncharacterized protein 39.9 55 0.0019 25.3 5.8 30 178-207 4-33 (208)
70 4ga2_A E3 SUMO-protein ligase 39.4 59 0.002 23.7 5.7 23 184-206 37-59 (150)
71 1elr_A TPR2A-domain of HOP; HO 38.4 86 0.0029 20.8 6.4 19 188-206 48-66 (131)
72 4a17_Y RPL37A, 60S ribosomal p 38.1 23 0.0008 25.9 2.9 31 132-166 34-64 (103)
73 2l6j_A TPR repeat-containing p 37.1 82 0.0028 20.6 5.8 49 180-236 6-54 (111)
74 3gyz_A Chaperone protein IPGC; 36.6 74 0.0025 23.8 5.9 14 223-236 107-120 (151)
75 2xcb_A PCRH, regulatory protei 36.2 80 0.0027 22.5 5.9 41 188-236 62-102 (142)
76 2kat_A Uncharacterized protein 35.0 79 0.0027 21.3 5.5 27 181-207 22-48 (115)
77 6rxn_A Rubredoxin; electron tr 34.9 23 0.00079 21.9 2.1 31 134-166 4-40 (46)
78 1na3_A Designed protein CTPR2; 34.2 86 0.0029 19.6 5.9 17 189-205 20-36 (91)
79 1ihg_A Cyclophilin 40; ppiase 33.0 57 0.0019 28.4 5.3 33 176-208 221-253 (370)
80 3ro3_A PINS homolog, G-protein 32.6 98 0.0034 21.3 5.8 50 184-235 55-104 (164)
81 3ro3_A PINS homolog, G-protein 32.5 1.1E+02 0.0037 21.1 6.0 50 185-236 96-145 (164)
82 2vgx_A Chaperone SYCD; alterna 31.7 1.2E+02 0.0043 21.9 6.4 45 184-236 61-105 (148)
83 2vyi_A SGTA protein; chaperone 31.6 1.1E+02 0.0038 20.1 6.4 44 185-236 53-96 (131)
84 4gco_A Protein STI-1; structur 31.0 1E+02 0.0035 21.7 5.6 26 181-206 50-75 (126)
85 3ffl_A Anaphase-promoting comp 30.3 1.2E+02 0.0042 23.9 6.3 61 177-238 62-140 (167)
86 2lni_A Stress-induced-phosphop 30.0 73 0.0025 21.5 4.6 50 179-236 51-100 (133)
87 1kt0_A FKBP51, 51 kDa FK506-bi 29.8 78 0.0027 28.2 5.7 32 178-209 268-299 (457)
88 1p5q_A FKBP52, FK506-binding p 29.1 92 0.0032 26.3 5.9 32 178-209 147-178 (336)
89 4ayb_P DNA-directed RNA polyme 28.9 33 0.0011 21.5 2.0 28 135-164 4-31 (48)
90 3jyw_9 60S ribosomal protein L 28.6 36 0.0012 23.3 2.4 31 132-166 24-54 (72)
91 3vtx_A MAMA; tetratricopeptide 28.5 1E+02 0.0035 22.5 5.5 49 180-236 109-157 (184)
92 3j20_Y 30S ribosomal protein S 28.3 22 0.00076 22.3 1.3 26 136-165 21-46 (50)
93 3upv_A Heat shock protein STI1 28.3 1.2E+02 0.004 20.7 5.5 15 191-205 85-99 (126)
94 2yrc_A Protein transport prote 27.8 22 0.00077 23.2 1.2 34 134-167 9-44 (59)
95 2c2l_A CHIP, carboxy terminus 27.8 97 0.0033 25.3 5.6 41 188-236 48-88 (281)
96 2crb_A Nuclear receptor bindin 27.6 1E+02 0.0035 22.1 4.8 34 178-211 15-48 (97)
97 3uq3_A Heat shock protein STI1 27.6 1.1E+02 0.0039 23.2 5.8 27 181-207 8-34 (258)
98 1dx8_A Rubredoxin; electron tr 27.4 35 0.0012 23.0 2.2 14 154-167 38-51 (70)
99 2if4_A ATFKBP42; FKBP-like, al 27.3 52 0.0018 28.0 3.9 33 176-208 177-209 (338)
100 3rkv_A Putative peptidylprolyl 27.2 1.1E+02 0.0039 22.0 5.5 23 184-206 69-91 (162)
101 2kn9_A Rubredoxin; metalloprot 27.0 35 0.0012 23.8 2.2 14 154-167 58-71 (81)
102 2xb1_A Pygopus homolog 2, B-ce 26.6 18 0.00062 26.3 0.7 83 111-201 3-101 (105)
103 2qfc_A PLCR protein; TPR, HTH, 26.4 1.6E+02 0.0055 23.7 6.8 54 181-236 199-252 (293)
104 3o9x_A Uncharacterized HTH-typ 26.2 56 0.0019 23.9 3.5 13 155-167 35-47 (133)
105 1twf_I B12.6, DNA-directed RNA 26.1 20 0.0007 26.8 0.9 30 136-167 6-37 (122)
106 1gh9_A 8.3 kDa protein (gene M 25.8 14 0.00048 25.2 -0.1 31 134-170 4-34 (71)
107 2fiy_A Protein FDHE homolog; F 25.7 25 0.00084 30.8 1.5 46 111-167 208-264 (309)
108 3qt1_I DNA-directed RNA polyme 25.6 28 0.00097 26.5 1.6 31 136-168 26-58 (133)
109 3h0g_I DNA-directed RNA polyme 25.3 24 0.00082 26.0 1.2 32 136-169 6-39 (113)
110 3ieg_A DNAJ homolog subfamily 24.9 1.5E+02 0.0051 23.8 6.3 50 179-236 38-87 (359)
111 4rxn_A Rubredoxin; electron tr 24.4 48 0.0017 21.2 2.3 13 154-166 34-46 (54)
112 3sz7_A HSC70 cochaperone (SGT) 24.4 1.8E+02 0.0062 20.9 6.2 52 179-236 80-131 (164)
113 2lo3_A SAGA-associated factor 24.3 23 0.00079 21.6 0.7 20 157-176 18-37 (44)
114 2k4x_A 30S ribosomal protein S 23.6 30 0.001 22.2 1.2 28 134-165 18-45 (55)
115 3ga8_A HTH-type transcriptiona 23.5 51 0.0018 22.2 2.5 12 155-166 35-46 (78)
116 2kck_A TPR repeat; tetratricop 23.4 1.2E+02 0.0041 19.4 4.6 51 180-236 42-93 (112)
117 1e8j_A Rubredoxin; iron-sulfur 23.1 52 0.0018 20.8 2.3 13 154-166 34-46 (52)
118 3ulq_A Response regulator aspa 23.1 2.1E+02 0.007 24.0 7.0 51 184-236 109-159 (383)
119 2dba_A Smooth muscle cell asso 23.0 1.6E+02 0.0056 20.1 5.5 27 181-207 68-94 (148)
120 1hxi_A PEX5, peroxisome target 22.7 1.9E+02 0.0067 19.9 5.8 39 190-236 63-101 (121)
121 2a9u_A Ubiquitin carboxyl-term 22.5 1.1E+02 0.0037 23.5 4.5 46 176-223 40-85 (144)
122 1d0q_A DNA primase; zinc-bindi 21.5 69 0.0024 22.8 3.0 17 155-171 57-73 (103)
123 1hh8_A P67PHOX, NCF-2, neutrop 21.4 89 0.0031 23.4 3.9 49 180-236 39-87 (213)
124 2v3b_B Rubredoxin 2, rubredoxi 21.2 51 0.0018 21.1 2.0 14 154-167 34-47 (55)
125 3ph0_C ASCG; type III secretio 20.8 39 0.0013 22.1 1.3 37 162-198 21-60 (61)
126 3lqh_A Histone-lysine N-methyl 20.7 2E+02 0.0067 22.9 5.9 12 156-167 54-65 (183)
127 3ro2_A PINS homolog, G-protein 20.6 2.2E+02 0.0074 22.3 6.3 24 183-206 10-33 (338)
128 4i17_A Hypothetical protein; T 20.4 1.7E+02 0.006 22.1 5.6 44 185-236 49-92 (228)
129 2yhc_A BAMD, UPF0169 lipoprote 20.4 1.4E+02 0.0047 23.1 5.0 49 184-237 153-201 (225)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.97 E-value=6.7e-31 Score=249.24 Aligned_cols=190 Identities=18% Similarity=0.270 Sum_probs=156.6
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCceeeeEEeccccccccCCCccCcEEEEeCC-------------EEEEEE
Q psy5735 8 FIGGLLLHQIQCLQFNCHEVADLVGTGESSKTRFIGAGIFPTLSMFNHSCEPNIVRYFRGT-------------MVYVNL 74 (247)
Q Consensus 8 ~~~~~ll~~~~~l~~Na~~i~~~~~~~~~~~~~~~g~glyp~~sl~NHSC~PN~~~~~~~~-------------~~~~~A 74 (247)
+-.+.|.++++++.+|+|+|.+. .....+|.||||.+|+|||||+||+.+.|+++ +++|+|
T Consensus 165 ~~~~~l~~~~~~~~~N~f~i~~~------~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A 238 (490)
T 3n71_A 165 FSMQYISHIFGVINCNGFTLSDQ------RGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRA 238 (490)
T ss_dssp CCHHHHHHHHHHHHTTEEEEECT------TSCSEEEEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEE
T ss_pred CCHHHHHHHHHHHhccCcccccC------CCCccceEEEchhhhhcccCCCCCeeEEecCCccccccccccccceEEEEE
Confidence 34567899999999999999863 12357999999999999999999999999986 999999
Q ss_pred cccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeEeecCCCCCCcchhhhhhhhhccccccCCCCCCcccccCCccc
Q psy5735 75 CKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDCHCIACEHDWPLFEEMQAAQDLRFRCETENCHNVVKVATNTTQ 154 (247)
Q Consensus 75 ~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~~~~~~~ 154 (247)
+|||++||||||||++.. +++.+||+.|+++|+|.|.|.+|.++.+.. ...++.+ |
T Consensus 239 ~rdI~~GEEltisY~~~~--~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~------~~~~~~~----~------------ 294 (490)
T 3n71_A 239 LGKISEGEELTVSYIDFL--HLSEERRRQLKKQYYFDCSCEHCQKGLKDD------LFLAAKE----D------------ 294 (490)
T ss_dssp SSCBCTTCBCEECSSCSC--SCHHHHHHHHHHHHSSCCCCHHHHHTTTHH------HHTCBCS----S------------
T ss_pred CCCCCCCCEEEEeecCCC--CCHHHHHHHHHCCCCeEeeCCCCCCCCccc------chhhccc----C------------
Confidence 999999999999999874 589999999999999999999999876421 1112211 0
Q ss_pred ccccccccccchhhhhhhhhhHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhc
Q psy5735 155 FMIKCDKCDQFINIFKGLKNLQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLG 234 (247)
Q Consensus 155 ~~~~C~~C~~~~~~~~~l~~lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g 234 (247)
. ..+.+.+...++.+..+++++..+.+.|++++|+..|.+.|.....++.+-|.++..+...|+..|...|
T Consensus 295 -----~----~~s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g 365 (490)
T 3n71_A 295 -----P----KPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQ 365 (490)
T ss_dssp -----S----CCCHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT
T ss_pred -----C----CCCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc
Confidence 0 1112333445555666777777888999999999999999999999999999999999999999999988
Q ss_pred cc
Q psy5735 235 QK 236 (247)
Q Consensus 235 ~~ 236 (247)
..
T Consensus 366 ~~ 367 (490)
T 3n71_A 366 AY 367 (490)
T ss_dssp CH
T ss_pred CH
Confidence 75
No 2
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.97 E-value=1.6e-30 Score=243.12 Aligned_cols=188 Identities=18% Similarity=0.283 Sum_probs=147.8
Q ss_pred HHHHHHHhhhhhcccccccccccCCCCCCceeeeEEeccccccccCCCccCcEEEEeCCEEEEEEcccccCCCeeeeccc
Q psy5735 10 GGLLLHQIQCLQFNCHEVADLVGTGESSKTRFIGAGIFPTLSMFNHSCEPNIVRYFRGTMVYVNLCKNFKKGDQICENYG 89 (247)
Q Consensus 10 ~~~ll~~~~~l~~Na~~i~~~~~~~~~~~~~~~g~glyp~~sl~NHSC~PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~ 89 (247)
.+.|+++++++.+|+|+|.+. +...+|.||||.+|+|||||.||+.+.|+|++++++|+|+|++||||||+|+
T Consensus 169 ~~~i~~~~~~~~~N~f~i~~~-------~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~Geel~i~Y~ 241 (433)
T 3qww_A 169 HSSLVVLFAQVNCNGFTIEDE-------ELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYI 241 (433)
T ss_dssp HHHHHHHHHHHHHHCEEEECT-------TCCEEEEEECTTGGGSEECSSCSEEEEEETTEEEEEESSCBCTTCEEEECCS
T ss_pred HHHHHHHHHHHcCCceecccC-------CccceeEEecccccccCCCCCCCceEEEcCCEEEEEeccCcCCCCEEEEeec
Confidence 467899999999999999873 3457999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHhcCCCeeEeecCCCCCCcchhhhhhhhhccccccCCCCCCcccccCCcccccccccccccchhhh
Q psy5735 90 PLYSQVRKTERQNTLKSQYWFDCHCIACEHDWPLFEEMQAAQDLRFRCETENCHNVVKVATNTTQFMIKCDKCDQFINIF 169 (247)
Q Consensus 90 ~~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~~~~~ 169 (247)
+.. +++.+||+.|+++|+|.|.|.+|.++.+. . ...++++ |.. ++ +. ..+.
T Consensus 242 ~~~--~~~~~R~~~L~~~~~F~C~C~~C~~~~~d-----~-~~~~~~~----~~~----~~-----------~~--e~v~ 292 (433)
T 3qww_A 242 DLL--YPTEDRNDRLRDSYFFTCECRECTTKDKD-----K-AKVEVRK----LSS----PP-----------QA--EAIR 292 (433)
T ss_dssp CTT--SCHHHHHHHHHHHHSCCCCSHHHHHCTTH-----H-HHTCBCC----CSS----CC-----------CH--HHHH
T ss_pred CCc--CCHHHHHHHHhCcCCEEeECCCCCCCCcc-----h-hhhhhhh----cCC----Cc-----------cH--HHHH
Confidence 875 69999999999999999999999988642 1 1112221 110 00 00 1121
Q ss_pred hhhhhhHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 170 KGLKNLQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 170 ~~l~~lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
. .++.+...++........|+|++|+..|.+.|.....+|.+-|.++..+...|+..|...|..
T Consensus 293 ~---~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~ 356 (433)
T 3qww_A 293 D---MVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDW 356 (433)
T ss_dssp H---HHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred H---HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCH
Confidence 1 222222233322233356789999999999999999999999999999999999999998875
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.96 E-value=8.1e-30 Score=238.04 Aligned_cols=176 Identities=19% Similarity=0.372 Sum_probs=144.9
Q ss_pred HHHHHHhhhhhcccccccccccCCCCCCceeeeEEeccccccccCCCccCcEEEEeCCEEEEEEcccccCCCeeeecccc
Q psy5735 11 GLLLHQIQCLQFNCHEVADLVGTGESSKTRFIGAGIFPTLSMFNHSCEPNIVRYFRGTMVYVNLCKNFKKGDQICENYGP 90 (247)
Q Consensus 11 ~~ll~~~~~l~~Na~~i~~~~~~~~~~~~~~~g~glyp~~sl~NHSC~PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~ 90 (247)
+.|+++++++.+|+|+|.+. +...+|.|+||.+|+|||||.||+.+.|+|++++++|+|||++||||||+|++
T Consensus 170 ~~~~~~~~~~~~N~f~i~~~-------~~~~~g~~l~~~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~GeEl~isY~~ 242 (429)
T 3qwp_A 170 FDLFEAFAKVICNSFTICNA-------EMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLD 242 (429)
T ss_dssp CCHHHHHHHHHHHCEEEECT-------TSCEEEEEECTTGGGCEECSSCSEEEEEETTEEEEEECSCBCTTCEEEECCSC
T ss_pred HHHHHHHHHHHhcCcccccc-------ccccceEEEchhhHhhCcCCCCCeEEEEeCCEEEEEEeeeECCCCEEEEEecC
Confidence 47899999999999999873 45578999999999999999999999999999999999999999999999998
Q ss_pred ccccCCHHHHHHHHhcCCCeeEeecCCCCCCcchhhhhhhhhccccccCCCCCCcccccCCcccccccccccccchhhhh
Q psy5735 91 LYSQVRKTERQNTLKSQYWFDCHCIACEHDWPLFEEMQAAQDLRFRCETENCHNVVKVATNTTQFMIKCDKCDQFINIFK 170 (247)
Q Consensus 91 ~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 170 (247)
.. +++.+||+.|+++|+|.|.|.+|.++......+. . .+..|.|
T Consensus 243 ~~--~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~---------------------~--~~~~~~~----------- 286 (429)
T 3qwp_A 243 ML--MTSEERRKQLRDQYCFECDCFRCQTQDKDADMLT---------------------G--DEQVWKE----------- 286 (429)
T ss_dssp SS--CCHHHHHHHHHHHHCCCCCSHHHHHTTTHHHHTC---------------------S--CHHHHHH-----------
T ss_pred CC--CCHHHHHHHHhccCCeEeeCCCCCCCcccccccc---------------------c--chhhhHH-----------
Confidence 74 6899999999999999999999998764211100 0 0112222
Q ss_pred hhhhhHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 171 GLKNLQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 171 ~l~~lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
++.++.....+...|++++|+..|.+.|.....+|.+-|.++..+...|+.-|...|..
T Consensus 287 -------~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~ 345 (429)
T 3qwp_A 287 -------VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLL 345 (429)
T ss_dssp -------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCH
T ss_pred -------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccH
Confidence 11122333345567899999999999999999999999999999999999999988864
No 4
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.60 E-value=1.6e-16 Score=137.88 Aligned_cols=82 Identities=23% Similarity=0.360 Sum_probs=65.9
Q ss_pred hcccccccccccCCCCCCceeeeEEeccc-cccccCCCccCcEEEEe-CCEEEEEEcccccCCCeeeeccccccccCCHH
Q psy5735 21 QFNCHEVADLVGTGESSKTRFIGAGIFPT-LSMFNHSCEPNIVRYFR-GTMVYVNLCKNFKKGDQICENYGPLYSQVRKT 98 (247)
Q Consensus 21 ~~Na~~i~~~~~~~~~~~~~~~g~glyp~-~sl~NHSC~PN~~~~~~-~~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~ 98 (247)
..|.|.|... ......++|+. ++++||||.||+...+. ++++.++|+|+|++|||||++|++.++.
T Consensus 155 ~~n~f~i~~~--------~~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~---- 222 (247)
T 3rq4_A 155 GENDFSIMYS--------TRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFG---- 222 (247)
T ss_dssp TTSCTTEEEE--------TTTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSS----
T ss_pred cCCcEEEEec--------CCcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcC----
Confidence 4677776542 11246889987 78999999999987765 5799999999999999999999988652
Q ss_pred HHHHHHhcCCCeeEeecCCCCCCc
Q psy5735 99 ERQNTLKSQYWFDCHCIACEHDWP 122 (247)
Q Consensus 99 ~R~~~L~~~~~F~C~C~~C~~~~~ 122 (247)
.++|.|.|.+|.++.+
T Consensus 223 --------~~~f~C~C~~C~~~~~ 238 (247)
T 3rq4_A 223 --------EKNEHCECHTCERKGE 238 (247)
T ss_dssp --------GGGTTCCCHHHHHHTC
T ss_pred --------CCCCEEECCCCCCCCC
Confidence 3679999999987654
No 5
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.47 E-value=1.3e-14 Score=127.26 Aligned_cols=62 Identities=24% Similarity=0.467 Sum_probs=52.7
Q ss_pred eccccccccCCCccCcEEEEeCC-EEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeEeecCCCC
Q psy5735 46 IFPTLSMFNHSCEPNIVRYFRGT-MVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDCHCIACEH 119 (247)
Q Consensus 46 lyp~~sl~NHSC~PN~~~~~~~~-~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C~C~~C~~ 119 (247)
....++++||||+||+...+.+. ++.++|+|||++|||||++|++.++. .+.|.|.|.+|.-
T Consensus 202 ~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~------------~~~f~C~C~~c~c 264 (273)
T 3s8p_A 202 WLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFG------------ENNEFCECYTCER 264 (273)
T ss_dssp EESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTS------------GGGTTCCCHHHHH
T ss_pred ecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcC------------CCCeEEECCCCcC
Confidence 33456899999999999988875 99999999999999999999987642 3579999998853
No 6
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.42 E-value=8.6e-14 Score=107.72 Aligned_cols=53 Identities=25% Similarity=0.303 Sum_probs=48.0
Q ss_pred eeEEeccccccccCCCccCcEEEEeC--CEEEEEEcccccCCCeeeecccccccc
Q psy5735 42 IGAGIFPTLSMFNHSCEPNIVRYFRG--TMVYVNLCKNFKKGDQICENYGPLYSQ 94 (247)
Q Consensus 42 ~g~glyp~~sl~NHSC~PN~~~~~~~--~~~~~~A~r~I~~Geei~~~Y~~~~~~ 94 (247)
.+..++|.++++||||.||+...+.. .++.++|+|+|++|||||++|++.++.
T Consensus 57 d~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~ 111 (119)
T 1n3j_A 57 MSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWL 111 (119)
T ss_dssp EEEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCCCCCCCC
T ss_pred ccccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEecCchhhc
Confidence 46788999999999999999999873 589999999999999999999998763
No 7
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.23 E-value=7.5e-12 Score=104.75 Aligned_cols=59 Identities=22% Similarity=0.504 Sum_probs=43.5
Q ss_pred ccccccCCCccCcEEEE---eC-CEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeEeec--CCC
Q psy5735 49 TLSMFNHSCEPNIVRYF---RG-TMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDCHCI--ACE 118 (247)
Q Consensus 49 ~~sl~NHSC~PN~~~~~---~~-~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C~C~--~C~ 118 (247)
.++++||||.||+...+ +| .++.++|+|+|++|||||++|+..++. ..+.|.|.|. .|.
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~-----------~~~~~~C~Cgs~~Cr 188 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIED-----------ASNKLPCNCGAKKCR 188 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC------------------CCBCCCCCTTCC
T ss_pred hhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhc-----------CCCCceeECCCCCCc
Confidence 45688999999998653 23 489999999999999999999976532 1367999994 554
No 8
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.12 E-value=1.8e-11 Score=99.63 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=41.2
Q ss_pred ccccccCCCccCcEEEE--eC--CEEEEEEcccccCCCeeeeccccccccCCHHHHHHHH
Q psy5735 49 TLSMFNHSCEPNIVRYF--RG--TMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTL 104 (247)
Q Consensus 49 ~~sl~NHSC~PN~~~~~--~~--~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L 104 (247)
.+.++||||.||+.... .+ .++.++|+|||++|||||++|++.+. ....|..+|
T Consensus 107 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~--~~~~~~~~L 164 (166)
T 3f9x_A 107 LGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK--ASIEAHPWL 164 (166)
T ss_dssp SGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH--HHHHHCGGG
T ss_pred hhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh--hHhhhCchh
Confidence 35778999999986653 33 37999999999999999999998753 344444444
No 9
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=99.09 E-value=6.2e-11 Score=101.93 Aligned_cols=62 Identities=26% Similarity=0.269 Sum_probs=46.8
Q ss_pred eeEEecc-ccccccCCCccCcEEEE--eC--CEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeEeec
Q psy5735 42 IGAGIFP-TLSMFNHSCEPNIVRYF--RG--TMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDCHCI 115 (247)
Q Consensus 42 ~g~glyp-~~sl~NHSC~PN~~~~~--~~--~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C~C~ 115 (247)
|-...+. .+.++||||.||+.... .+ .++.++|+|+|++|||||++|+..++. ...|.|.|.
T Consensus 157 IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~------------~~~~~C~CG 223 (232)
T 3ooi_A 157 IDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLG------------NGKTVCKCG 223 (232)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTT------------CTTCBCCCC
T ss_pred EeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCC------------CCCcEeECC
Confidence 4344444 45678999999997754 22 589999999999999999999976532 245888885
No 10
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.07 E-value=6.2e-11 Score=101.22 Aligned_cols=63 Identities=21% Similarity=0.252 Sum_probs=46.5
Q ss_pred eeEEeccc-cccccCCCccCcEEEE--eC--CEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeEeec
Q psy5735 42 IGAGIFPT-LSMFNHSCEPNIVRYF--RG--TMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDCHCI 115 (247)
Q Consensus 42 ~g~glyp~-~sl~NHSC~PN~~~~~--~~--~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C~C~ 115 (247)
|-...+.. +.++||||.||+.... .+ .++.++|+|+|++|||||++|+..++.. ...|.|.|-
T Consensus 138 IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~-----------~~~~~C~CG 205 (222)
T 3ope_A 138 IDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNV-----------EKQQLCKCG 205 (222)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCC-----------SCCCBCCCC
T ss_pred EeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCC-----------cCCCEeeCC
Confidence 33334443 4578999999997665 33 4899999999999999999999875421 235777776
No 11
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=99.00 E-value=2.8e-10 Score=100.31 Aligned_cols=62 Identities=24% Similarity=0.199 Sum_probs=45.0
Q ss_pred eeEEecc-ccccccCCCccCcEEEE--eC--CEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeEeec
Q psy5735 42 IGAGIFP-TLSMFNHSCEPNIVRYF--RG--TMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDCHCI 115 (247)
Q Consensus 42 ~g~glyp-~~sl~NHSC~PN~~~~~--~~--~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C~C~ 115 (247)
|....+. .+.++||||+||+.... .+ .++.++|+|+|++|||||++|+..++. ...|.|.|.
T Consensus 182 IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~------------~~~~~C~CG 248 (278)
T 3h6l_A 182 IDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYG------------KEAQKCFCG 248 (278)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEEC------------SSCEECCCC
T ss_pred EeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCC------------CCCcEeECC
Confidence 3333344 35678999999975433 34 378999999999999999999865432 245888885
No 12
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.96 E-value=3.1e-10 Score=100.45 Aligned_cols=66 Identities=26% Similarity=0.504 Sum_probs=48.5
Q ss_pred eeeeEEecccc-ccccCCCccCcEEE--EeC------CEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCe
Q psy5735 40 RFIGAGIFPTL-SMFNHSCEPNIVRY--FRG------TMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWF 110 (247)
Q Consensus 40 ~~~g~glyp~~-sl~NHSC~PN~~~~--~~~------~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F 110 (247)
..|-...+... .++||||.||+... +.. .++.++|+|+|++|||||++|++.++. . ....|
T Consensus 206 ~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~--~--------~~~~~ 275 (287)
T 3hna_A 206 YCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWD--I--------KGKLF 275 (287)
T ss_dssp EEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHH--H--------HTTTC
T ss_pred EEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccc--c--------CCCcC
Confidence 35556666655 56699999999743 321 389999999999999999999976531 1 12468
Q ss_pred eEeec
Q psy5735 111 DCHCI 115 (247)
Q Consensus 111 ~C~C~ 115 (247)
.|.|.
T Consensus 276 ~C~CG 280 (287)
T 3hna_A 276 SCRCG 280 (287)
T ss_dssp CCCCC
T ss_pred EeeCC
Confidence 88884
No 13
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.95 E-value=3.6e-10 Score=100.68 Aligned_cols=52 Identities=23% Similarity=0.441 Sum_probs=38.6
Q ss_pred eeEEecc-ccccccCCCccCcEEEEe-C-------CEEEEEEcccccCCCeeeeccccccc
Q psy5735 42 IGAGIFP-TLSMFNHSCEPNIVRYFR-G-------TMVYVNLCKNFKKGDQICENYGPLYS 93 (247)
Q Consensus 42 ~g~glyp-~~sl~NHSC~PN~~~~~~-~-------~~~~~~A~r~I~~Geei~~~Y~~~~~ 93 (247)
|-...+. .+.++||||+||+..... + .++.++|+|+|++|||||++|++.++
T Consensus 212 IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~ 272 (302)
T 1ml9_A 212 VDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLT 272 (302)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC---
T ss_pred EeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCcc
Confidence 3333444 356899999999976532 2 37999999999999999999997654
No 14
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.85 E-value=1.7e-09 Score=96.20 Aligned_cols=52 Identities=25% Similarity=0.402 Sum_probs=40.2
Q ss_pred eeEEecc-ccccccCCCccCcEEE--EeC------CEEEEEEcccccCCCeeeeccccccc
Q psy5735 42 IGAGIFP-TLSMFNHSCEPNIVRY--FRG------TMVYVNLCKNFKKGDQICENYGPLYS 93 (247)
Q Consensus 42 ~g~glyp-~~sl~NHSC~PN~~~~--~~~------~~~~~~A~r~I~~Geei~~~Y~~~~~ 93 (247)
|....+. .+.++||||+||+... +.+ .++.++|+|+|++|||||++|++.++
T Consensus 205 IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 205 VDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred EeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 3333343 4568899999999763 322 48999999999999999999998765
No 15
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=98.83 E-value=2.6e-09 Score=101.25 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=64.0
Q ss_pred HHHHHHhhhhhcccccccccccCCCCCCceeeeEEeccccccccCCCccCcEEE-EeCCEEEEEEcccccCCCeeeeccc
Q psy5735 11 GLLLHQIQCLQFNCHEVADLVGTGESSKTRFIGAGIFPTLSMFNHSCEPNIVRY-FRGTMVYVNLCKNFKKGDQICENYG 89 (247)
Q Consensus 11 ~~ll~~~~~l~~Na~~i~~~~~~~~~~~~~~~g~glyp~~sl~NHSC~PN~~~~-~~~~~~~~~A~r~I~~Geei~~~Y~ 89 (247)
+.......++.+++|.+... +....+.+++|.+.++||||.|+.... +.++.+.++|.++|++||||+++||
T Consensus 241 e~f~wA~~~v~SRa~~~~~~-------~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG 313 (497)
T 3smt_A 241 EDYRWAVSSVMTRQNQIPTE-------DGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYG 313 (497)
T ss_dssp HHHHHHHHHHHHHCEEEECT-------TSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCC
T ss_pred HHHHHhhheEecccccccCc-------ccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCC
Confidence 34445556666777766432 112356899999999999999965433 3467899999999999999999999
Q ss_pred cccccCCHHHHHHHHhcCCCeeEe
Q psy5735 90 PLYSQVRKTERQNTLKSQYWFDCH 113 (247)
Q Consensus 90 ~~~~~~~~~~R~~~L~~~~~F~C~ 113 (247)
+. + ...|...|||.+.
T Consensus 314 ~~----~----n~~Ll~~YGFv~~ 329 (497)
T 3smt_A 314 TR----S----NAEFVIHSGFFFD 329 (497)
T ss_dssp SC----C----HHHHHHHHSCCCT
T ss_pred CC----C----hHHHHHHCCCCCC
Confidence 74 2 1345557999754
No 16
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.81 E-value=3.8e-09 Score=94.04 Aligned_cols=44 Identities=20% Similarity=0.425 Sum_probs=36.9
Q ss_pred ccccccCCCccCcEEE--EeC------CEEEEEEcccccCCCeeeecccccc
Q psy5735 49 TLSMFNHSCEPNIVRY--FRG------TMVYVNLCKNFKKGDQICENYGPLY 92 (247)
Q Consensus 49 ~~sl~NHSC~PN~~~~--~~~------~~~~~~A~r~I~~Geei~~~Y~~~~ 92 (247)
.++++||||+||+... +.+ .++.++|+|+|++|||||++|+...
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~ 266 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKG 266 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSS
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCc
Confidence 4678999999999764 221 4899999999999999999999763
No 17
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.80 E-value=2.3e-09 Score=93.59 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=36.4
Q ss_pred ccccccCCCccCcEEEE--e---CCEEEEEEcccccCCCeeeecccccc
Q psy5735 49 TLSMFNHSCEPNIVRYF--R---GTMVYVNLCKNFKKGDQICENYGPLY 92 (247)
Q Consensus 49 ~~sl~NHSC~PN~~~~~--~---~~~~~~~A~r~I~~Geei~~~Y~~~~ 92 (247)
.++++||||+||+...+ . +..+.++|+|+|++|||||++|+...
T Consensus 186 ~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~ 234 (261)
T 2f69_A 186 LGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDH 234 (261)
T ss_dssp CGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCS
T ss_pred ceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCcc
Confidence 35788999999998776 2 23459999999999999999999654
No 18
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.79 E-value=3.4e-09 Score=93.91 Aligned_cols=52 Identities=19% Similarity=0.341 Sum_probs=41.1
Q ss_pred eeEEecc-ccccccCCCccCcEEEE---eC--CEEEEEEcccccCCCeeeeccccccc
Q psy5735 42 IGAGIFP-TLSMFNHSCEPNIVRYF---RG--TMVYVNLCKNFKKGDQICENYGPLYS 93 (247)
Q Consensus 42 ~g~glyp-~~sl~NHSC~PN~~~~~---~~--~~~~~~A~r~I~~Geei~~~Y~~~~~ 93 (247)
|-...+. .+.++||||+||+.... ++ .++.++|+|+|++|||||++|++.++
T Consensus 197 IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 254 (290)
T 3bo5_A 197 VDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYL 254 (290)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTT
T ss_pred EeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccc
Confidence 3334444 45688999999998653 33 58999999999999999999998765
No 19
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.79 E-value=3.9e-09 Score=84.80 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=39.9
Q ss_pred cccccCCCcc---CcEEEEeCCEEEEEEcccccCCCeeeeccccccc
Q psy5735 50 LSMFNHSCEP---NIVRYFRGTMVYVNLCKNFKKGDQICENYGPLYS 93 (247)
Q Consensus 50 ~sl~NHSC~P---N~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~~ 93 (247)
+.++||||.| |+...-.++++.++|+|+|++||||++.|++.++
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY~~~~~ 146 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDN 146 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECCCCCCC
T ss_pred eeeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEccCCccC
Confidence 5688999999 9998777899999999999999999999997653
No 20
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.79 E-value=3.1e-09 Score=99.49 Aligned_cols=64 Identities=19% Similarity=0.255 Sum_probs=55.6
Q ss_pred eeeEEeccccccccCCCccCcEEEEeCCEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCeeE
Q psy5735 41 FIGAGIFPTLSMFNHSCEPNIVRYFRGTMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFDC 112 (247)
Q Consensus 41 ~~g~glyp~~sl~NHSC~PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~C 112 (247)
..+.++.|.+.++||||.||+.+.++++.+.++|.++|++||||+++||+. + ...|...|||..
T Consensus 214 ~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG~~----~----n~~ll~~YGF~~ 277 (449)
T 3qxy_A 214 PNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQM----A----NWQLIHMYGFVE 277 (449)
T ss_dssp CCCCBBCTTGGGCEECSSCSEEEEECSSEEEEEESSCBCTTCEEEECCSSC----C----HHHHHHHHSCCC
T ss_pred CCceeEeecHHHhcCCCCCCeEEEEeCCeEEEEECCCcCCCchhhccCCCC----C----HHHHHHhCCCCC
Confidence 356899999999999999999999999999999999999999999999974 2 234555799965
No 21
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.77 E-value=2.1e-09 Score=95.06 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=35.6
Q ss_pred cccccCCCccCcEEEEe-C---CE-EEEEEcccccCCCeeeecccccc
Q psy5735 50 LSMFNHSCEPNIVRYFR-G---TM-VYVNLCKNFKKGDQICENYGPLY 92 (247)
Q Consensus 50 ~sl~NHSC~PN~~~~~~-~---~~-~~~~A~r~I~~Geei~~~Y~~~~ 92 (247)
++++||||+|||...+. . .+ +.++|+|||++|||||++|+...
T Consensus 241 ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~ 288 (293)
T 1h3i_A 241 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDH 288 (293)
T ss_dssp GGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTB
T ss_pred eeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCC
Confidence 45789999999988762 2 23 58999999999999999998543
No 22
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=98.43 E-value=2.2e-07 Score=86.37 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=48.6
Q ss_pred eEEeccccccccCCCccCc---EEEEe--------CCEEEEEEcccccCCCeeeeccccccccCCHHHHHHHHhcCCCee
Q psy5735 43 GAGIFPTLSMFNHSCEPNI---VRYFR--------GTMVYVNLCKNFKKGDQICENYGPLYSQVRKTERQNTLKSQYWFD 111 (247)
Q Consensus 43 g~glyp~~sl~NHSC~PN~---~~~~~--------~~~~~~~A~r~I~~Geei~~~Y~~~~~~~~~~~R~~~L~~~~~F~ 111 (247)
+.++.|.+.++||+|.||. .+.++ ++.++++|.++|++||||+++||+.. +. ..|...|||.
T Consensus 183 ~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~~---~N----~~LL~~YGFv 255 (440)
T 2h21_A 183 NLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLNK---SN----AELALDYGFI 255 (440)
T ss_dssp CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTTC---CH----HHHHHHSSCC
T ss_pred ceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCCC---CH----HHHHHhCCCC
Confidence 4789999999999999974 33322 35799999999999999999999752 11 2344569996
Q ss_pred Ee
Q psy5735 112 CH 113 (247)
Q Consensus 112 C~ 113 (247)
..
T Consensus 256 ~~ 257 (440)
T 2h21_A 256 EP 257 (440)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 23
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=98.13 E-value=1.8e-06 Score=69.21 Aligned_cols=45 Identities=11% Similarity=0.232 Sum_probs=38.5
Q ss_pred ccccccCCCcc---CcEEEEeCCEEEEEEcccccCCCeeeeccccccc
Q psy5735 49 TLSMFNHSCEP---NIVRYFRGTMVYVNLCKNFKKGDQICENYGPLYS 93 (247)
Q Consensus 49 ~~sl~NHSC~P---N~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~~ 93 (247)
-+.++||+|.+ |+...-.++++.++|+|+|++||||++.|++.|.
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC---
T ss_pred ceeEEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEecCHHHH
Confidence 35788999975 9998888999999999999999999999998764
No 24
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.98 E-value=5e-06 Score=67.95 Aligned_cols=44 Identities=11% Similarity=0.165 Sum_probs=38.1
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEcccccCCCeeeeccccccc
Q psy5735 50 LSMFNHSCE---PNIVRYFRGTMVYVNLCKNFKKGDQICENYGPLYS 93 (247)
Q Consensus 50 ~sl~NHSC~---PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~~ 93 (247)
+.++||+|. +|+...-.++++.++|+|+|++|+||++.|++.+.
T Consensus 102 mR~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 102 MTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC---
T ss_pred eeeEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 467899997 89988888999999999999999999999998764
No 25
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=97.79 E-value=1.2e-05 Score=67.10 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=39.2
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEcccccCCCeeeecccccc
Q psy5735 50 LSMFNHSCE---PNIVRYFRGTMVYVNLCKNFKKGDQICENYGPLY 92 (247)
Q Consensus 50 ~sl~NHSC~---PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~ 92 (247)
+.++||+|. +|+...-.++++.++|+|+|++|+||++.|++.|
T Consensus 132 mRfVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwYg~~Y 177 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDF 177 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHH
T ss_pred EEeEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEecCHHH
Confidence 468899997 7998888899999999999999999999999765
No 26
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=97.62 E-value=2.8e-05 Score=62.33 Aligned_cols=43 Identities=23% Similarity=0.356 Sum_probs=39.5
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEcccccCCCeeeecccccc
Q psy5735 50 LSMFNHSCE---PNIVRYFRGTMVYVNLCKNFKKGDQICENYGPLY 92 (247)
Q Consensus 50 ~sl~NHSC~---PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~ 92 (247)
+.++||+|. +|+...-.++++.++|+|+|++|+||++.|++.+
T Consensus 97 mr~vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 97 MMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp GGGCCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEECHHH
T ss_pred eeeeeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEechHHH
Confidence 578999998 7999888899999999999999999999999765
No 27
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=97.45 E-value=7.2e-05 Score=63.98 Aligned_cols=43 Identities=19% Similarity=0.418 Sum_probs=39.3
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEcccccCCCeeeecccccc
Q psy5735 50 LSMFNHSCE---PNIVRYFRGTMVYVNLCKNFKKGDQICENYGPLY 92 (247)
Q Consensus 50 ~sl~NHSC~---PN~~~~~~~~~~~~~A~r~I~~Geei~~~Y~~~~ 92 (247)
+.++||+|. +|+...-.++++.++|+|+|++|+||++.|++.|
T Consensus 141 mRfVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwYg~~Y 186 (237)
T 3ray_A 141 MRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDY 186 (237)
T ss_dssp GGGCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHH
T ss_pred eeEEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEeeCHHH
Confidence 478999996 6988888899999999999999999999999875
No 28
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=78.95 E-value=3.1 Score=38.66 Aligned_cols=56 Identities=11% Similarity=-0.056 Sum_probs=49.1
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhcc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQ 235 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~ 235 (247)
.+...|.-+...|++++|+..|.+.|..+...+.+-|.++...+..|.+|++.+|.
T Consensus 395 ~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 395 AVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 34445556677899999999999999999999999999999999999999988875
No 29
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=75.79 E-value=2.9 Score=29.39 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=32.0
Q ss_pred hhHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc
Q psy5735 174 NLQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENL 212 (247)
Q Consensus 174 ~lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l 212 (247)
.++++..++.+|...-..|++++|+..|.+.+..+...+
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~al 53 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLV 53 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 455666788888888889999999999999998776553
No 30
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=75.79 E-value=4.5 Score=36.78 Aligned_cols=56 Identities=7% Similarity=0.102 Sum_probs=49.1
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLG 234 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g 234 (247)
..+.+.+.-+...|++++|+..|.+.|..+...+.|-|..+..+..-|+.|.+++.
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 34555566677889999999999999999999999999999999999999998875
No 31
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=74.78 E-value=3.1 Score=29.19 Aligned_cols=38 Identities=16% Similarity=0.206 Sum_probs=31.4
Q ss_pred hHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc
Q psy5735 175 LQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENL 212 (247)
Q Consensus 175 lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l 212 (247)
++++..++++|...-..|++++|+..|.+.|..+...+
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~l 45 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQII 45 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 45666788888888889999999999999998776553
No 32
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=73.32 E-value=6 Score=36.11 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=48.0
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...+..+...|++++|+..|.+.|.....++.+.|.++..+.--|+.-|...|..
T Consensus 343 ~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~ 398 (433)
T 3qww_A 343 MYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENK 398 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCH
Confidence 33345566778999999999999999999999999999999988888888888864
No 33
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=73.13 E-value=8 Score=28.72 Aligned_cols=62 Identities=26% Similarity=0.430 Sum_probs=41.4
Q ss_pred hHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc---CCC-------cccHHHHHHHHHHHHHHhccc
Q psy5735 175 LQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENL---VPP-------YRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 175 lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l---~~p-------~~~~~~~~~~l~~c~~~~g~~ 236 (247)
++.++.+...+..++..|++++|+..|.+.|..+.... .|. ......+.-.++.||..+|+.
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~ 79 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDL 79 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 34455667778888899999999999999998654321 122 223334555667777777654
No 34
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=64.43 E-value=6.9 Score=27.96 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=30.3
Q ss_pred hHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc
Q psy5735 175 LQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENL 212 (247)
Q Consensus 175 lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l 212 (247)
++++..++.+|...-..+++++|+..|...+..+...+
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 34566677778888888999999999999998776554
No 35
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=64.38 E-value=15 Score=26.44 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=14.4
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~ 206 (247)
...++..++..|++++|++.|.+.|.
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~ 41 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVK 41 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33445555556666666666665554
No 36
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=63.48 E-value=7.2 Score=27.15 Aligned_cols=39 Identities=21% Similarity=0.166 Sum_probs=30.2
Q ss_pred hhHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc
Q psy5735 174 NLQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENL 212 (247)
Q Consensus 174 ~lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l 212 (247)
.++++..++.+|...-..|++++|+..|.+.+..+...+
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~ 47 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLAL 47 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 345566677778887788999999999999998765443
No 37
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=63.21 E-value=21 Score=24.85 Aligned_cols=48 Identities=8% Similarity=0.050 Sum_probs=26.0
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...+.-+...+++++|+..|.+.+... |. ...+.-.+..++..+|+.
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p~---~~~~~~~lg~~~~~~~~~ 88 (126)
T 3upv_A 41 YSNRAAALAKLMSFPEAIADCNKAIEKD-----PN---FVRAYIRKATAQIAVKEY 88 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CC---cHHHHHHHHHHHHHHhCH
Confidence 3334444555666666666666665432 11 134455566666666654
No 38
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=63.18 E-value=6.8 Score=29.31 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=30.1
Q ss_pred hHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc
Q psy5735 175 LQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENL 212 (247)
Q Consensus 175 lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l 212 (247)
++++..++.+|...-..+++++|+..|...+..+..++
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 44566677778777778999999999999998776554
No 39
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=63.02 E-value=16 Score=32.30 Aligned_cols=52 Identities=13% Similarity=0.031 Sum_probs=43.0
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHH
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLN 232 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~ 232 (247)
.++.+-+....|++++|+..|.++|+..-.+......+-.++.+.|..|.--
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEY 168 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREY 168 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHH
Confidence 4556778888999999999999999988777777778888888888887643
No 40
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=62.64 E-value=17 Score=24.28 Aligned_cols=57 Identities=12% Similarity=-0.015 Sum_probs=36.8
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCc---ccHHHHHHHHHHHHHHhcccccccc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPY---RDYILCQRSIQTCFLNLGQKCLNKE 241 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~---~~~~~~~~~l~~c~~~~g~~~l~~~ 241 (247)
.+...+.-+...|++++|+..+.+.+.. .|.+ ..+..+.-.+..++..+|......+
T Consensus 40 ~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 99 (111)
T 2l6j_A 40 GYSNKAMALIKLGEYTQAIQMCQQGLRY-----TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVV 99 (111)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTS-----CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHh
Confidence 3444455566677888888888876643 2322 3346777788888888886655444
No 41
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=61.97 E-value=17 Score=32.10 Aligned_cols=52 Identities=21% Similarity=0.285 Sum_probs=42.2
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHH
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLN 232 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~ 232 (247)
.++.+-+....|++++|+..|.++|+..-.+......+-.++.+.|..|.--
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreY 156 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREY 156 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHH
Confidence 3556777888999999999999999988767777777888888888777543
No 42
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=61.76 E-value=30 Score=23.97 Aligned_cols=57 Identities=16% Similarity=0.060 Sum_probs=42.5
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhcccc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQKC 237 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~~ 237 (247)
+.+..+..++..++|+.|+.-|...+.....-- .+..........|..|+..+|+..
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~~~g~~~ 63 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVYQQGDLD 63 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHHHccCHH
Confidence 356667788889999999999999887653211 123456677899999999999753
No 43
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=60.72 E-value=9.3 Score=30.09 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=31.1
Q ss_pred hhhhHhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhh
Q psy5735 172 LKNLQDTESLFRLANNYKENGLYEKALEKFTQLMTLLDE 210 (247)
Q Consensus 172 l~~lq~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~ 210 (247)
++.+.++..++..+..++..|++++|+..|.+.|.....
T Consensus 5 ~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 5 LKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 344455677778888889999999999999999986654
No 44
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=58.70 E-value=2.9 Score=29.57 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=22.3
Q ss_pred hccccccCCCCCCcccccCCcccccccccccccch
Q psy5735 132 DLRFRCETENCHNVVKVATNTTQFMIKCDKCDQFI 166 (247)
Q Consensus 132 ~~~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~~ 166 (247)
...+.| +.|++...... ....|.|..|+...
T Consensus 25 ~~~y~C--p~CG~~~v~r~--atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 25 NEDHAC--PNCGEDRVDRQ--GTGIWQCSYCDYKF 55 (83)
T ss_dssp HSCEEC--SSSCCEEEEEE--ETTEEEETTTCCEE
T ss_pred cccCcC--CCCCCcceecc--CCCeEECCCCCCEe
Confidence 456899 89988654443 24579999999864
No 45
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=58.24 E-value=24 Score=27.62 Aligned_cols=56 Identities=18% Similarity=0.291 Sum_probs=43.1
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...+.-+...|++++|+..+.+.+........+.......+...++.++...|+.
T Consensus 130 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 130 LNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 33445556778999999999999998877666666666777888888888888764
No 46
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=57.63 E-value=24 Score=25.29 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=14.1
Q ss_pred HhhhhccchHHHHHHHHHHHHh
Q psy5735 185 ANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 185 a~~~~~~~~~e~al~~~~~~L~ 206 (247)
+..++..|++++|++.|.+.|.
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~ 36 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIE 36 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 4455566677777777776664
No 47
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=57.41 E-value=20 Score=28.17 Aligned_cols=56 Identities=20% Similarity=0.153 Sum_probs=43.0
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...+.-+...|++++|+..|.+.+........+.+.....+.-.+..+|...|+.
T Consensus 88 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 143 (283)
T 3edt_B 88 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKA 143 (283)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCH
Confidence 44455666778999999999999998877666666667777777788888777764
No 48
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=55.92 E-value=32 Score=23.62 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=32.1
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
.+..+...+..|++++|+..|...+.. .|.+.....+.-.+..++..+|+.
T Consensus 42 ~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~~g~~ 92 (129)
T 2xev_A 42 LYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYGEGKN 92 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHcCCH
Confidence 344455566778888888888877653 233334455566667777776654
No 49
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.57 E-value=29 Score=24.25 Aligned_cols=22 Identities=32% Similarity=0.379 Sum_probs=11.0
Q ss_pred HHhhhhccchHHHHHHHHHHHH
Q psy5735 184 LANNYKENGLYEKALEKFTQLM 205 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L 205 (247)
.+...+..+++++|++.|.+.+
T Consensus 34 ~a~~~~~~~~~~~A~~~~~~a~ 55 (148)
T 2dba_A 34 EGNELFKCGDYGGALAAYTQAL 55 (148)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHH
Confidence 3444445555555555555544
No 50
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=53.19 E-value=32 Score=27.44 Aligned_cols=52 Identities=17% Similarity=0.220 Sum_probs=27.2
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhcc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQ 235 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~ 235 (247)
+.++..+...+..|++++|+..|.+++... |.+.....+.-.+..||...|+
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~~~ 67 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTYG-----RTHEWAADAQFYLARAYYQNKE 67 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-----SCSTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHhCc
Confidence 345555666666677777777776665421 2222233444444444444443
No 51
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=52.90 E-value=36 Score=23.38 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=33.4
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
++..+...+..|++++|+..|...+... |.+.....+.-.+..++...|+.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~~~~~lg~~~~~~~~~ 55 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELY-----PNGVYTPNALYWLGESYYATRNF 55 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-----SSSTTHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHC-----CCCcccHHHHHHHHHHHHHhccH
Confidence 3445666778899999999999887642 33333334555566666666654
No 52
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=52.35 E-value=51 Score=25.00 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=25.6
Q ss_pred hHHHHHHHHhhhhccchHHHHHHHHHHHHhhh
Q psy5735 177 DTESLFRLANNYKENGLYEKALEKFTQLMTLL 208 (247)
Q Consensus 177 ~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~ 208 (247)
.++.+...+..++..+++++|+..|.+.+...
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 68 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFF 68 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44556667778888999999999999988754
No 53
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=51.57 E-value=39 Score=24.76 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=24.4
Q ss_pred HHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 182 FRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 182 ~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+..+.-++..+++++|+..|.+.+... |. ...+.-.+..+|..+|+.
T Consensus 49 ~~l~~~~~~~g~~~~A~~~~~~al~~~-----p~---~~~~~~~lg~~~~~~g~~ 95 (164)
T 3sz7_A 49 SNRAAAYSASGQHEKAAEDAELATVVD-----PK---YSKAWSRLGLARFDMADY 95 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhC-----CC---CHHHHHHHHHHHHHccCH
Confidence 334444455566666666666655432 11 134445566666666654
No 54
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.46 E-value=40 Score=22.17 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=28.7
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
....+.-....+++++|+..+.+.+... |. ...+.-.++.++...|+.
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~---~~~~~~~~a~~~~~~~~~ 88 (118)
T 1elw_A 41 YSNRSAAYAKKGDYQKAYEDGCKTVDLK-----PD---WGKGYSRKAAALEFLNRF 88 (118)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhC-----cc---cHHHHHHHHHHHHHHhhH
Confidence 3444555566677888888777766532 11 134455667777777654
No 55
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=50.96 E-value=26 Score=26.09 Aligned_cols=47 Identities=9% Similarity=0.358 Sum_probs=27.5
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhcc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQ 235 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~ 235 (247)
++..+......|++++|++.|.+.|... |-+ ..+.-.++.+|..+|+
T Consensus 8 y~~lG~~~~~~g~~~~A~~~~~~al~~~-----p~~---~~~~~~la~~~~~~~~ 54 (184)
T 3vtx_A 8 YMDIGDKKRTKGDFDGAIRAYKKVLKAD-----PNN---VETLLKLGKTYMDIGL 54 (184)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHCCC
Confidence 3444555667788888888888877542 111 2344455555555554
No 56
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=49.56 E-value=34 Score=27.30 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=38.5
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...+..+...|++++|+..+.+.+........+.......+...+..+|...|+.
T Consensus 30 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 85 (311)
T 3nf1_A 30 LHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKY 85 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCH
Confidence 44455566778899999999999888765554344455556666677777766654
No 57
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=48.88 E-value=32 Score=23.30 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=17.2
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTL 207 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~ 207 (247)
.+..+..++..|++++|+..|.+.+..
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 36 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVET 36 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 334455556667777777777776653
No 58
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=48.65 E-value=44 Score=26.59 Aligned_cols=55 Identities=18% Similarity=0.337 Sum_probs=42.2
Q ss_pred HHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 182 FRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 182 ~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
...+.-+...|++++|++.|.+.+........+.+.....+...++.+|...|+.
T Consensus 157 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 211 (311)
T 3nf1_A 157 NNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF 211 (311)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 3345556778999999999999998876665555666777888888888888865
No 59
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.46 E-value=8 Score=26.80 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=15.3
Q ss_pred EEEEcccccCCCeeeecc
Q psy5735 71 YVNLCKNFKKGDQICENY 88 (247)
Q Consensus 71 ~~~A~r~I~~Geei~~~Y 88 (247)
.++|.++|++||.|+-.=
T Consensus 8 slvA~rdI~~Gevit~~d 25 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDM 25 (79)
T ss_dssp EEEESSCBCTTCBCCGGG
T ss_pred EEEEeCccCCCCCcCHHH
Confidence 678999999999988554
No 60
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=48.31 E-value=40 Score=26.42 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=24.8
Q ss_pred HhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 185 ANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 185 a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+......|++++|+..|.+++. +.|-+.....+.-.+..++..+|..
T Consensus 48 g~~~~~~~~~~~A~~~~~~~l~-----~~P~~~~~~~a~~~~g~~~~~~~~~ 94 (225)
T 2yhc_A 48 IYAYYKNADLPLAQAAIDRFIR-----LNPTHPNIDYVMYMRGLTNMALDDS 94 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhcCCHHHHHHHHHHHHH-----HCcCCCcHHHHHHHHHHHHHhhhhh
Confidence 3344445666666666665553 3344444445555555666555543
No 61
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=47.80 E-value=17 Score=25.46 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=27.3
Q ss_pred HHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhcc
Q psy5735 178 TESLFRLANNYKENGLYEKALEKFTQLMTLLDENL 212 (247)
Q Consensus 178 ~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l 212 (247)
+..++.+|...-..|++++|+..|.+.+..+-..+
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~al 50 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVL 50 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 34466677777788999999999999998765443
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=42.40 E-value=76 Score=22.46 Aligned_cols=44 Identities=23% Similarity=0.192 Sum_probs=22.0
Q ss_pred HhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 185 ANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 185 a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+.-....+++++|+..+.+.+... |.+ ..+.-.+..++..+|+.
T Consensus 54 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~~~~~ 97 (166)
T 1a17_A 54 SLAYLRTECYGYALGDATRAIELD-----KKY---IKGYYRRAASNMALGKF 97 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC-----ccc---HHHHHHHHHHHHHhccH
Confidence 334445556666666666555432 111 23344555566666553
No 63
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=41.61 E-value=53 Score=28.49 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=12.4
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~ 206 (247)
++..+..++..|++++|+..|.+.+.
T Consensus 9 ~~~~g~~~~~~g~~~~A~~~~~~al~ 34 (514)
T 2gw1_A 9 LKDKGNQFFRNKKYDDAIKYYNWALE 34 (514)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 33344444444555555555554443
No 64
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=41.54 E-value=48 Score=21.69 Aligned_cols=19 Identities=21% Similarity=0.385 Sum_probs=9.5
Q ss_pred hhccchHHHHHHHHHHHHh
Q psy5735 188 YKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 188 ~~~~~~~e~al~~~~~~L~ 206 (247)
++..+++++|+..|.+.+.
T Consensus 10 ~~~~~~~~~A~~~~~~al~ 28 (99)
T 2kc7_A 10 LINQGDIENALQALEEFLQ 28 (99)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 3344555555555555443
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=41.34 E-value=63 Score=22.87 Aligned_cols=57 Identities=11% Similarity=0.058 Sum_probs=37.0
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
..+...+.-++..|++++|++.+.+.|...... .+.+..+..+.-.+..++..+|+.
T Consensus 43 ~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~a~~~~~lg~~~~~~~~~ 99 (127)
T 4gcn_A 43 TFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET-RADYKLIAKAMSRAGNAFQKQNDL 99 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-chhhHHHHHHHHHHHHHHHHcCCH
Confidence 445556777788899999999999988754322 223344455555666666666553
No 66
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=41.29 E-value=70 Score=22.02 Aligned_cols=50 Identities=16% Similarity=0.078 Sum_probs=28.8
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
..++..+.-++..+++++|+..+...+... |. ...+.-.+..++..+|+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-----p~---~~~~~~~l~~~~~~~~~~ 93 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELD-----GQ---SVKAHFFLGQCQLEMESY 93 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----ch---hHHHHHHHHHHHHHHhhH
Confidence 333444445556677777777777666532 11 233555677777777764
No 67
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=40.10 E-value=11 Score=23.31 Aligned_cols=30 Identities=23% Similarity=0.468 Sum_probs=19.5
Q ss_pred cccccCCCCCC-cccccCCcccccccccccccchh
Q psy5735 134 RFRCETENCHN-VVKVATNTTQFMIKCDKCDQFIN 167 (247)
Q Consensus 134 ~~~C~~~~C~~-~~~~~~~~~~~~~~C~~C~~~~~ 167 (247)
.+.| +.|++ .+..+. ....+.|..||....
T Consensus 5 ~~~C--P~C~~~~l~~d~--~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 5 QKVC--PACESAELIYDP--ERGEIVCAKCGYVIE 35 (50)
T ss_dssp CCSC--TTTSCCCEEEET--TTTEEEESSSCCBCC
T ss_pred cEeC--cCCCCcceEEcC--CCCeEECcccCCccc
Confidence 4678 78877 554443 234688999987553
No 68
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=40.00 E-value=85 Score=21.41 Aligned_cols=27 Identities=19% Similarity=0.294 Sum_probs=15.8
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTL 207 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~ 207 (247)
.+..+.-+...|++++|+..|.+.+..
T Consensus 30 ~~~lg~~~~~~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 30 YLGLGSTFRTLGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 333444555666677777776666643
No 69
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=39.94 E-value=55 Score=25.31 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=24.8
Q ss_pred HHHHHHHHhhhhccchHHHHHHHHHHHHhh
Q psy5735 178 TESLFRLANNYKENGLYEKALEKFTQLMTL 207 (247)
Q Consensus 178 ~~~l~~~a~~~~~~~~~e~al~~~~~~L~~ 207 (247)
++.++.++..++..|++++|+..|.+.+..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 33 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL 33 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 455677788888999999999999998863
No 70
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=39.41 E-value=59 Score=23.75 Aligned_cols=23 Identities=22% Similarity=0.271 Sum_probs=14.8
Q ss_pred HHhhhhccchHHHHHHHHHHHHh
Q psy5735 184 LANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L~ 206 (247)
.+.-++..|++++|++.|.+.|.
T Consensus 37 la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 37 FAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445566777777777777665
No 71
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=38.42 E-value=86 Score=20.85 Aligned_cols=19 Identities=32% Similarity=0.440 Sum_probs=9.2
Q ss_pred hhccchHHHHHHHHHHHHh
Q psy5735 188 YKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 188 ~~~~~~~e~al~~~~~~L~ 206 (247)
+...+++++|+..+.+.+.
T Consensus 48 ~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 48 YFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHh
Confidence 3344455555555554443
No 72
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=38.15 E-value=23 Score=25.88 Aligned_cols=31 Identities=23% Similarity=0.566 Sum_probs=19.2
Q ss_pred hccccccCCCCCCcccccCCcccccccccccccch
Q psy5735 132 DLRFRCETENCHNVVKVATNTTQFMIKCDKCDQFI 166 (247)
Q Consensus 132 ~~~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~~ 166 (247)
...+.| +.|+..-... .....|.|.+|++..
T Consensus 34 ~aky~C--pfCgk~~vKR--~a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 34 HAKYGC--PFCGKVAVKR--AAVGIWKCKPCKKII 64 (103)
T ss_dssp HSCEEC--TTTCCEEEEE--EETTEEEETTTTEEE
T ss_pred hcCCCC--CCCCCceeee--cCcceEEcCCCCCEE
Confidence 446888 7887542211 123579999998653
No 73
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=37.13 E-value=82 Score=20.61 Aligned_cols=49 Identities=22% Similarity=0.336 Sum_probs=30.3
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
.++..+...+..|++++|+..|.+.+... |.+ ..+.-.+..|+..+|+.
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~---~~~~~~lg~~~~~~g~~ 54 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITAQ-----PQN---PVGYSNKAMALIKLGEY 54 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCC---HHHHHHHHHHHHHhcCH
Confidence 34555667778889999999998888642 111 23344555555555543
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=36.56 E-value=74 Score=23.78 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=8.0
Q ss_pred HHHHHHHHHHhccc
Q psy5735 223 QRSIQTCFLNLGQK 236 (247)
Q Consensus 223 ~~~l~~c~~~~g~~ 236 (247)
.-.+..||..+|+.
T Consensus 107 ~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 107 VFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCH
Confidence 33556666666654
No 75
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=36.16 E-value=80 Score=22.46 Aligned_cols=41 Identities=24% Similarity=0.299 Sum_probs=19.0
Q ss_pred hhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 188 YKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 188 ~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...|++++|+..|...+... |.+. .+.-.+..||..+|+.
T Consensus 62 ~~~~g~~~~A~~~~~~al~~~-----p~~~---~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 62 RQSLGLYEQALQSYSYGALMD-----INEP---RFPFHAAECHLQLGDL 102 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC-----TTCT---HHHHHHHHHHHHTTCH
T ss_pred HHHHhhHHHHHHHHHHHHhcC-----CCCc---HHHHHHHHHHHHcCCH
Confidence 344455555555555544321 2111 2233456666666654
No 76
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=35.01 E-value=79 Score=21.35 Aligned_cols=27 Identities=22% Similarity=0.486 Sum_probs=17.6
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTL 207 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~ 207 (247)
++..+..+...|++++|+..|...+..
T Consensus 22 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 22 RFTLGKTYAEHEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 344455556677788888777777653
No 77
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=34.90 E-value=23 Score=21.95 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=18.3
Q ss_pred cccccCCCCCCcccccCC------cccccccccccccch
Q psy5735 134 RFRCETENCHNVVKVATN------TTQFMIKCDKCDQFI 166 (247)
Q Consensus 134 ~~~C~~~~C~~~~~~~~~------~~~~~~~C~~C~~~~ 166 (247)
.++| ..|+-.+..... .....|.|+.|+...
T Consensus 4 ~y~C--~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~k 40 (46)
T 6rxn_A 4 KYVC--NVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSK 40 (46)
T ss_dssp CEEE--TTTCCEECGGGGTTCCGGGSCTTCBCTTTCCBG
T ss_pred EEEC--CCCCeEEeCCcCCCcchhhCCCCCcCcCCCCcH
Confidence 4678 777755431110 123469999999643
No 78
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=34.24 E-value=86 Score=19.62 Aligned_cols=17 Identities=24% Similarity=0.569 Sum_probs=8.0
Q ss_pred hccchHHHHHHHHHHHH
Q psy5735 189 KENGLYEKALEKFTQLM 205 (247)
Q Consensus 189 ~~~~~~e~al~~~~~~L 205 (247)
...+++++|+..|.+.+
T Consensus 20 ~~~~~~~~A~~~~~~a~ 36 (91)
T 1na3_A 20 YKQGDYDEAIEYYQKAL 36 (91)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHH
Confidence 34444455554444444
No 79
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=33.03 E-value=57 Score=28.39 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=26.2
Q ss_pred HhHHHHHHHHhhhhccchHHHHHHHHHHHHhhh
Q psy5735 176 QDTESLFRLANNYKENGLYEKALEKFTQLMTLL 208 (247)
Q Consensus 176 q~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~ 208 (247)
..+..+...+..++..+++++|+..|.+.|...
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~ 253 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYV 253 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 344556667778889999999999999998743
No 80
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=32.58 E-value=98 Score=21.29 Aligned_cols=50 Identities=20% Similarity=0.160 Sum_probs=25.1
Q ss_pred HHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhcc
Q psy5735 184 LANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQ 235 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~ 235 (247)
.+......|++++|+..+.+.+.... -.........+.-.+..++...|+
T Consensus 55 l~~~~~~~g~~~~A~~~~~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 104 (164)
T 3ro3_A 55 LGNAYIFLGEFETASEYYKKTLLLAR--QLKDRAVEAQSCYSLGNTYTLLQD 104 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHhh
Confidence 34444555666666666666554432 122223334445555555555554
No 81
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=32.51 E-value=1.1e+02 Score=21.07 Aligned_cols=50 Identities=20% Similarity=0.228 Sum_probs=33.0
Q ss_pred HhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 185 ANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 185 a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+.-....+++++|+..+.+.+..... .........+...++.++...|+.
T Consensus 96 ~~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~la~~~~~~g~~ 145 (164)
T 3ro3_A 96 GNTYTLLQDYEKAIDYHLKHLAIAQE--LKDRIGEGRACWSLGNAYTALGNH 145 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHH--ccchHhHHHHHHHHHHHHHHccCH
Confidence 33445667888888888887766543 233445556677777777777764
No 82
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=31.72 E-value=1.2e+02 Score=21.90 Aligned_cols=45 Identities=16% Similarity=0.215 Sum_probs=23.2
Q ss_pred HHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 184 LANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
.+.-+...|++++|+..|...+... |.+. .+.-.+..||..+|+.
T Consensus 61 lg~~~~~~g~~~~A~~~~~~al~l~-----p~~~---~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 61 LGACRQAMGQYDLAIHSYSYGAVMD-----IXEP---RFPFHAAECLLQXGEL 105 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS-----TTCT---HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhcC-----CCCc---hHHHHHHHHHHHcCCH
Confidence 3344445566666666666655421 2111 2334566677776664
No 83
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=31.65 E-value=1.1e+02 Score=20.15 Aligned_cols=44 Identities=18% Similarity=0.321 Sum_probs=22.2
Q ss_pred HhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 185 ANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 185 a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+.-....+++++|+..+.+.+... |.+ ..+.-.+..++..+|+.
T Consensus 53 a~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~ 96 (131)
T 2vyi_A 53 AAAYSKLGNYAGAVQDCERAICID-----PAY---SKAYGRMGLALSSLNKH 96 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhhchHHHHHHHHHHHhcC-----ccC---HHHHHHHHHHHHHhCCH
Confidence 334445566666666666655431 111 23344555566665543
No 84
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=30.95 E-value=1e+02 Score=21.74 Aligned_cols=26 Identities=12% Similarity=0.088 Sum_probs=15.6
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~ 206 (247)
++..+.-+...|++++|+..|.+.|.
T Consensus 50 ~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 50 YSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 34445555566667777776666664
No 85
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=30.35 E-value=1.2e+02 Score=23.89 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=39.3
Q ss_pred hHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCc------------------ccHHHHHHHHHHHHHHhccccc
Q psy5735 177 DTESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPY------------------RDYILCQRSIQTCFLNLGQKCL 238 (247)
Q Consensus 177 ~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~------------------~~~~~~~~~l~~c~~~~g~~~l 238 (247)
+.+.++-.|..++..++|-.|...|.+.|+....+.-.+. .|.. .-=-|+.||..+|+...
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~E-lkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIE-VKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHH-HHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHH-HHHHHHHHHHHHCCHHH
Confidence 3445555677778899999999999998876553332221 1112 22349999999998654
No 86
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=29.96 E-value=73 Score=21.46 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=32.7
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
..++..+.-+...+++++|++.+.+.+... |. ...+.-.++.++..+|+.
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-----~~---~~~~~~~la~~~~~~~~~ 100 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLE-----PT---FIKGYTRKAAALEAMKDY 100 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----CC---chHHHHHHHHHHHHHhhH
Confidence 444555666677788888888888877642 21 234556677788777764
No 87
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=29.77 E-value=78 Score=28.22 Aligned_cols=32 Identities=16% Similarity=0.342 Sum_probs=25.6
Q ss_pred HHHHHHHHhhhhccchHHHHHHHHHHHHhhhh
Q psy5735 178 TESLFRLANNYKENGLYEKALEKFTQLMTLLD 209 (247)
Q Consensus 178 ~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~ 209 (247)
+..+..++..++..+++++|+..|.+.|....
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p 299 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLE 299 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 44556677788889999999999999987543
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=29.07 E-value=92 Score=26.32 Aligned_cols=32 Identities=19% Similarity=0.422 Sum_probs=25.3
Q ss_pred HHHHHHHHhhhhccchHHHHHHHHHHHHhhhh
Q psy5735 178 TESLFRLANNYKENGLYEKALEKFTQLMTLLD 209 (247)
Q Consensus 178 ~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~ 209 (247)
+..+...+..++..+++++|+..|.+.+....
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p 178 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLE 178 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 44555667778889999999999999987653
No 89
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=28.91 E-value=33 Score=21.48 Aligned_cols=28 Identities=18% Similarity=0.509 Sum_probs=11.5
Q ss_pred ccccCCCCCCcccccCCccccccccccccc
Q psy5735 135 FRCETENCHNVVKVATNTTQFMIKCDKCDQ 164 (247)
Q Consensus 135 ~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~ 164 (247)
|+| -.|+..+......--...+|+-||.
T Consensus 4 Y~C--~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 4 YRC--GKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp -CC--CCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EEe--eccCCCccHHHHhhCCCcccCccCc
Confidence 445 4555444322221122355666653
No 90
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=28.64 E-value=36 Score=23.25 Aligned_cols=31 Identities=16% Similarity=0.442 Sum_probs=20.2
Q ss_pred hccccccCCCCCCcccccCCcccccccccccccch
Q psy5735 132 DLRFRCETENCHNVVKVATNTTQFMIKCDKCDQFI 166 (247)
Q Consensus 132 ~~~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~~ 166 (247)
...+.| +.|+..-... .....|.|.+|++..
T Consensus 24 ~~ky~C--~fCgk~~vkR--~a~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 24 HARYDC--SFCGKKTVKR--GAAGIWTCSCCKKTV 54 (72)
T ss_dssp HSCBCC--SSCCSSCBSB--CSSSCBCCSSSCCCC
T ss_pred ccCccC--CCCCCceeEe--cCCCeEECCCCCCEE
Confidence 456888 8887643221 123579999998764
No 91
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=28.48 E-value=1e+02 Score=22.54 Aligned_cols=49 Identities=22% Similarity=0.451 Sum_probs=32.3
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
.....+.-+...|++++|++.|.+.+... |.+ ..+.-.+..+|..+|+.
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-----p~~---~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 109 AYYKLGLVYDSMGEHDKAIEAYEKTISIK-----PGF---IRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHhc-----chh---hhHHHHHHHHHHHCCCH
Confidence 34445666677899999999999888642 211 33455666777777654
No 92
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.32 E-value=22 Score=22.34 Aligned_cols=26 Identities=27% Similarity=0.397 Sum_probs=15.9
Q ss_pred cccCCCCCCcccccCCcccccccccccccc
Q psy5735 136 RCETENCHNVVKVATNTTQFMIKCDKCDQF 165 (247)
Q Consensus 136 ~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~ 165 (247)
.| |.|+.++.... ....+.|.+|+.+
T Consensus 21 ~C--P~CG~~~fm~~--~~~R~~C~kCG~t 46 (50)
T 3j20_Y 21 FC--PRCGPGVFMAD--HGDRWACGKCGYT 46 (50)
T ss_dssp EC--SSSCSSCEEEE--CSSEEECSSSCCE
T ss_pred cC--CCCCCceEEec--CCCeEECCCCCCE
Confidence 48 67886443221 2346899999853
No 93
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=28.26 E-value=1.2e+02 Score=20.69 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=6.8
Q ss_pred cchHHHHHHHHHHHH
Q psy5735 191 NGLYEKALEKFTQLM 205 (247)
Q Consensus 191 ~~~~e~al~~~~~~L 205 (247)
.|++++|+..|.+.+
T Consensus 85 ~~~~~~A~~~~~~al 99 (126)
T 3upv_A 85 VKEYASALETLDAAR 99 (126)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHH
Confidence 344444444444444
No 94
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=27.77 E-value=22 Score=23.16 Aligned_cols=34 Identities=18% Similarity=0.363 Sum_probs=20.3
Q ss_pred cccccCCCCCCcccccC--Ccccccccccccccchh
Q psy5735 134 RFRCETENCHNVVKVAT--NTTQFMIKCDKCDQFIN 167 (247)
Q Consensus 134 ~~~C~~~~C~~~~~~~~--~~~~~~~~C~~C~~~~~ 167 (247)
-+||..+.|+..+..-- +.....|.|+-|+..-+
T Consensus 9 pvRC~r~~CraylNP~~~~~~~~~~W~C~~C~~~N~ 44 (59)
T 2yrc_A 9 PVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQ 44 (59)
T ss_dssp CCBCSCTTTCCBCCTTSEEEGGGTEEECSSSCCEEE
T ss_pred CcccCCCCCCeEECCceEEECCCCEEEcccCCCcCC
Confidence 47893333988663111 12235799999987543
No 95
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=27.77 E-value=97 Score=25.31 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=19.7
Q ss_pred hhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 188 YKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 188 ~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...|++++|+..|.+.+.. .| +...+.-.++.+|..+|+.
T Consensus 48 ~~~~~~~~~A~~~~~~al~~-----~p---~~~~~~~~lg~~~~~~g~~ 88 (281)
T 2c2l_A 48 YLKMQQPEQALADCRRALEL-----DG---QSVKAHFFLGQCQLEMESY 88 (281)
T ss_dssp HHHTTCHHHHHHHHHHHTTS-----CT---TCHHHHHHHHHHHHHTTCH
T ss_pred HHHhcCHHHHHHHHHHHHHh-----CC---CCHHHHHHHHHHHHHcCCH
Confidence 34445555555555554432 11 1234445556666666643
No 96
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=27.60 E-value=1e+02 Score=22.10 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=25.1
Q ss_pred HHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhc
Q psy5735 178 TESLFRLANNYKENGLYEKALEKFTQLMTLLDEN 211 (247)
Q Consensus 178 ~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~ 211 (247)
+...-++|.++...|.|++||+.+.+....+.+.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 3334456778888999999999888877666544
No 97
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=27.57 E-value=1.1e+02 Score=23.22 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=15.4
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTL 207 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~ 207 (247)
+...+...+..|++++|+..|.+.+..
T Consensus 8 ~~~~g~~~~~~~~~~~A~~~~~~a~~~ 34 (258)
T 3uq3_A 8 EKAEGNKFYKARQFDEAIEHYNKAWEL 34 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 444455555566666666666665543
No 98
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=27.43 E-value=35 Score=23.01 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=10.5
Q ss_pred cccccccccccchh
Q psy5735 154 QFMIKCDKCDQFIN 167 (247)
Q Consensus 154 ~~~~~C~~C~~~~~ 167 (247)
...|.|+.|+...+
T Consensus 38 Pddw~CP~Cga~K~ 51 (70)
T 1dx8_A 38 SDSFMCPACRSPKN 51 (70)
T ss_dssp CTTCBCTTTCCBGG
T ss_pred CCCCcCCCCCCCHH
Confidence 35799999997543
No 99
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=27.34 E-value=52 Score=28.03 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=26.5
Q ss_pred HhHHHHHHHHhhhhccchHHHHHHHHHHHHhhh
Q psy5735 176 QDTESLFRLANNYKENGLYEKALEKFTQLMTLL 208 (247)
Q Consensus 176 q~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~ 208 (247)
+.+..+...+..++..+++++|+..|.+.+...
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~ 209 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM 209 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 345556677888889999999999999988754
No 100
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=27.25 E-value=1.1e+02 Score=21.98 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=12.6
Q ss_pred HHhhhhccchHHHHHHHHHHHHh
Q psy5735 184 LANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L~ 206 (247)
.+.-++..|++++|+..+...|.
T Consensus 69 la~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 69 MSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHh
Confidence 34444555566666666655554
No 101
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=27.05 E-value=35 Score=23.84 Aligned_cols=14 Identities=14% Similarity=0.235 Sum_probs=10.5
Q ss_pred cccccccccccchh
Q psy5735 154 QFMIKCDKCDQFIN 167 (247)
Q Consensus 154 ~~~~~C~~C~~~~~ 167 (247)
...|.|+.|+...+
T Consensus 58 PddW~CPvCga~K~ 71 (81)
T 2kn9_A 58 PDDWSCPDCGAAKS 71 (81)
T ss_dssp CTTCCCTTTCCCGG
T ss_pred CCCCcCCCCCCCHH
Confidence 34799999997543
No 102
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=26.61 E-value=18 Score=26.32 Aligned_cols=83 Identities=17% Similarity=0.153 Sum_probs=39.7
Q ss_pred eEeecCCCCCCcchhhhhhhhhccccccCCCCCCcccc---cCCc---------ccccccccccccchhhhhhhh---hh
Q psy5735 111 DCHCIACEHDWPLFEEMQAAQDLRFRCETENCHNVVKV---ATNT---------TQFMIKCDKCDQFINIFKGLK---NL 175 (247)
Q Consensus 111 ~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~---~~~~---------~~~~~~C~~C~~~~~~~~~l~---~l 175 (247)
.+.|..|..++.. ...-+.|. ..|...+.. .... .+..|.|+.|........... .+
T Consensus 3 ~~~C~iC~~p~~~-------~~~mi~Cd-d~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~~~~~~sk~~ 74 (105)
T 2xb1_A 3 VYPCGACRSEVND-------DQDAILCE-ASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGSGSGSGSQFV 74 (105)
T ss_dssp CCBCTTTCSBCCT-------TSCEEECT-TTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC--------C
T ss_pred cCCCCCCCCccCC-------CCCEEEec-CCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCCCCCCCcccc
Confidence 3567888877421 11235562 267665532 2111 125799999976543211100 00
Q ss_pred -HhHHHHHHHHhhhhccchHHHHHHHH
Q psy5735 176 -QDTESLFRLANNYKENGLYEKALEKF 201 (247)
Q Consensus 176 -q~~~~l~~~a~~~~~~~~~e~al~~~ 201 (247)
-....+..+++...-.|++|.+|...
T Consensus 75 yvfst~lan~aAea~~~g~~~~~~~~~ 101 (105)
T 2xb1_A 75 YVFTTHLANTAAEAVLQGRADSILAYH 101 (105)
T ss_dssp EEECHHHHHHHHHHHHTTSSSSHHHHH
T ss_pred eEeccchhhhHHHHHhcchHHHHHhhh
Confidence 01123444555555566666665443
No 103
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=26.43 E-value=1.6e+02 Score=23.73 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=37.5
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+...+.-+...|++++|+..+.+.+..... ......+..+.-.+..+|..+|+.
T Consensus 199 ~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~ 252 (293)
T 2qfc_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCR--INSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCSSHHHHHHHHHHHHHHTTCC
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHHcCCc
Confidence 344555667789999999999999876532 122234566777777888877764
No 104
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=26.23 E-value=56 Score=23.87 Aligned_cols=13 Identities=23% Similarity=0.544 Sum_probs=10.1
Q ss_pred ccccccccccchh
Q psy5735 155 FMIKCDKCDQFIN 167 (247)
Q Consensus 155 ~~~~C~~C~~~~~ 167 (247)
..|.|+.||...-
T Consensus 35 ~~~~C~~CGE~~~ 47 (133)
T 3o9x_A 35 HGLYCVHCEESIM 47 (133)
T ss_dssp EEEEESSSSCEEC
T ss_pred ceeECCCCCCEee
Confidence 4689999997653
No 105
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=26.07 E-value=20 Score=26.76 Aligned_cols=30 Identities=17% Similarity=0.642 Sum_probs=21.2
Q ss_pred cccCCCCCCcccccCC--cccccccccccccchh
Q psy5735 136 RCETENCHNVVKVATN--TTQFMIKCDKCDQFIN 167 (247)
Q Consensus 136 ~C~~~~C~~~~~~~~~--~~~~~~~C~~C~~~~~ 167 (247)
-| +.|++.+.+..+ .....+.|..|+....
T Consensus 6 FC--p~CgnlL~~~~~~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 6 FC--RDCNNMLYPREDKENNRLLFECRTCSYVEE 37 (122)
T ss_dssp BC--SSSCCBCEEEEETTTTEEEEECSSSSCEEE
T ss_pred cc--cccCccCcccccCcCCCCEEECCcCCCeee
Confidence 48 899998865543 2345689999987654
No 106
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=25.85 E-value=14 Score=25.19 Aligned_cols=31 Identities=26% Similarity=0.600 Sum_probs=21.0
Q ss_pred cccccCCCCCCcccccCCcccccccccccccchhhhh
Q psy5735 134 RFRCETENCHNVVKVATNTTQFMIKCDKCDQFINIFK 170 (247)
Q Consensus 134 ~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 170 (247)
.++| + |+........ ...-+|. ||+..++.+
T Consensus 4 vv~C--~-C~~~~~~~~~--~kT~~C~-CG~~~~~~k 34 (71)
T 1gh9_A 4 IFRC--D-CGRALYSREG--AKTRKCV-CGRTVNVKD 34 (71)
T ss_dssp EEEE--T-TSCCEEEETT--CSEEEET-TTEEEECCS
T ss_pred EEEC--C-CCCEEEEcCC--CcEEECC-CCCeeeece
Confidence 4789 7 9987655432 2235798 999887654
No 107
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=25.69 E-value=25 Score=30.76 Aligned_cols=46 Identities=17% Similarity=0.648 Sum_probs=30.0
Q ss_pred eEeecCCCCCCcchhhhhhhhhccccccCCCCCCc--cc---ccC-----C-cccccccccccccchh
Q psy5735 111 DCHCIACEHDWPLFEEMQAAQDLRFRCETENCHNV--VK---VAT-----N-TTQFMIKCDKCDQFIN 167 (247)
Q Consensus 111 ~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~~~--~~---~~~-----~-~~~~~~~C~~C~~~~~ 167 (247)
.+.|..|...|. +.+++| +.|++. +. +.. . .....-.|..|+....
T Consensus 208 ~l~Cs~C~t~W~---------~~R~~C--~~Cg~~~~l~y~~~e~~~~~~~~~~~r~e~C~~C~~YlK 264 (309)
T 2fiy_A 208 YLSCSLCACEWH---------YVRIKC--SHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLK 264 (309)
T ss_dssp EEEETTTCCEEE---------CCTTSC--SSSCCCSCCEEECCCC-CCCSTTCSEEEEEETTTTEEEE
T ss_pred EEEeCCCCCEEe---------ecCcCC--cCCCCCCCeeEEEecCccccCCCcceEEEEcccccchHh
Confidence 589999999983 457899 888863 11 111 1 1123467999996654
No 108
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=25.56 E-value=28 Score=26.51 Aligned_cols=31 Identities=16% Similarity=0.609 Sum_probs=21.6
Q ss_pred cccCCCCCCcccccCCc--ccccccccccccchhh
Q psy5735 136 RCETENCHNVVKVATNT--TQFMIKCDKCDQFINI 168 (247)
Q Consensus 136 ~C~~~~C~~~~~~~~~~--~~~~~~C~~C~~~~~~ 168 (247)
-| +.|++.+.+..+. ....|.|..|+....+
T Consensus 26 FC--PeCgNmL~pked~~~~~l~~~CrtCgY~~~~ 58 (133)
T 3qt1_I 26 FC--RDCNNMLYPREDKENNRLLFECRTCSYVEEA 58 (133)
T ss_dssp BC--TTTCCBCBCCBCTTTCCBCCBCSSSCCBCCC
T ss_pred eC--CCCCCEeeECccCCCceeEEECCCCCCcEEc
Confidence 38 8999988655432 2346999999976553
No 109
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=25.28 E-value=24 Score=25.97 Aligned_cols=32 Identities=19% Similarity=0.434 Sum_probs=21.3
Q ss_pred cccCCCCCCcccccCCc--ccccccccccccchhhh
Q psy5735 136 RCETENCHNVVKVATNT--TQFMIKCDKCDQFINIF 169 (247)
Q Consensus 136 ~C~~~~C~~~~~~~~~~--~~~~~~C~~C~~~~~~~ 169 (247)
-| +.|++.+.+..+. ....+.|..|+....+.
T Consensus 6 FC--p~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~~~ 39 (113)
T 3h0g_I 6 YC--IECNNMLYPREDKVDRVLRLACRNCDYSEIAA 39 (113)
T ss_dssp CC--SSSCCCCEECCCTTTCCCCEECSSSCCEECCS
T ss_pred eC--cCCCCEeeEcccCCCCeeEEECCCCCCeEEcC
Confidence 37 8899887655432 23468999998765543
No 110
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=24.90 E-value=1.5e+02 Score=23.78 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=29.6
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+.++..+......|++++|+..+.+.+... |. ...+.-.+..++...|+.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~--~~~~~~~l~~~~~~~~~~ 87 (359)
T 3ieg_A 38 IAYYRRATVFLAMGKSKAALPDLTKVIALK------MD--FTAARLQRGHLLLKQGKL 87 (359)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TT--CHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CC--cchHHHHHHHHHHHcCCh
Confidence 344444555566677777777777766541 11 125556677777777764
No 111
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=24.44 E-value=48 Score=21.19 Aligned_cols=13 Identities=15% Similarity=0.010 Sum_probs=10.0
Q ss_pred cccccccccccch
Q psy5735 154 QFMIKCDKCDQFI 166 (247)
Q Consensus 154 ~~~~~C~~C~~~~ 166 (247)
...|.|+.|+...
T Consensus 34 P~dw~CP~Cg~~K 46 (54)
T 4rxn_A 34 PDDWVCPLCGVGK 46 (54)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCcCCCCcH
Confidence 3479999999754
No 112
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=24.43 E-value=1.8e+02 Score=20.88 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=34.5
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 179 ESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 179 ~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
..++..+..+...+++++|+..|.+.+... |.+.+ ......+..+...+++.
T Consensus 80 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~-~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 80 KAWSRLGLARFDMADYKGAKEAYEKGIEAE-----GNGGS-DAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----SSSCC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCchH-HHHHHHHHHHHHHHHHH
Confidence 455556666677889999999999887643 33333 34566677777666554
No 113
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=24.27 E-value=23 Score=21.63 Aligned_cols=20 Identities=20% Similarity=0.501 Sum_probs=15.1
Q ss_pred ccccccccchhhhhhhhhhH
Q psy5735 157 IKCDKCDQFINIFKGLKNLQ 176 (247)
Q Consensus 157 ~~C~~C~~~~~~~~~l~~lq 176 (247)
-.|+.||+...+...++.|+
T Consensus 18 RvC~~CgkPi~lsAIvdHLe 37 (44)
T 2lo3_A 18 RVCEKCGKPLALTAIVDHLE 37 (44)
T ss_dssp EECTTTCCEEETTTHHHHHH
T ss_pred hhhcccCCcchHHHHHHHHH
Confidence 36999998887777666665
No 114
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=23.58 E-value=30 Score=22.15 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=18.5
Q ss_pred cccccCCCCCCcccccCCcccccccccccccc
Q psy5735 134 RFRCETENCHNVVKVATNTTQFMIKCDKCDQF 165 (247)
Q Consensus 134 ~~~C~~~~C~~~~~~~~~~~~~~~~C~~C~~~ 165 (247)
...| |.|+..+.... ....+.|.+|+..
T Consensus 18 ~~fC--PkCG~~~~ma~--~~dr~~C~kCgyt 45 (55)
T 2k4x_A 18 HRFC--PRCGPGVFLAE--HADRYSCGRCGYT 45 (55)
T ss_dssp SCCC--TTTTTTCCCEE--CSSEEECTTTCCC
T ss_pred cccC--cCCCCceeEec--cCCEEECCCCCCE
Confidence 4568 68987654332 1246899999865
No 115
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=23.46 E-value=51 Score=22.21 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=9.6
Q ss_pred ccccccccccch
Q psy5735 155 FMIKCDKCDQFI 166 (247)
Q Consensus 155 ~~~~C~~C~~~~ 166 (247)
.-|.|+.||...
T Consensus 35 p~~~C~~CGE~~ 46 (78)
T 3ga8_A 35 HGLYCVHCEESI 46 (78)
T ss_dssp EEEEETTTCCEE
T ss_pred eeEECCCCCCEE
Confidence 469999999754
No 116
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=23.35 E-value=1.2e+02 Score=19.40 Aligned_cols=51 Identities=8% Similarity=0.120 Sum_probs=32.3
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHh-ccc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNL-GQK 236 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~-g~~ 236 (247)
..+..+..+...+++++|+..+.+.+.... . .....+.-.++.++..+ |+.
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-----~-~~~~~~~~~l~~~~~~~~~~~ 93 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIE-----D-EYNKDVWAAKADALRYIEGKE 93 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSC-----C-TTCHHHHHHHHHHHTTCSSCS
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCc-----c-cchHHHHHHHHHHHHHHhCCH
Confidence 344456666778899999999998876421 1 11234555666677666 654
No 117
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=23.15 E-value=52 Score=20.76 Aligned_cols=13 Identities=15% Similarity=0.148 Sum_probs=9.9
Q ss_pred cccccccccccch
Q psy5735 154 QFMIKCDKCDQFI 166 (247)
Q Consensus 154 ~~~~~C~~C~~~~ 166 (247)
...|.|+.|+...
T Consensus 34 P~dw~CP~Cg~~K 46 (52)
T 1e8j_A 34 PDDWACPVCGASK 46 (52)
T ss_dssp CTTCCCSSSCCCT
T ss_pred CCCCcCCCCCCcH
Confidence 3579999999643
No 118
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=23.05 E-value=2.1e+02 Score=23.96 Aligned_cols=51 Identities=10% Similarity=-0.046 Sum_probs=34.0
Q ss_pred HHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 184 LANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
++......|++++|+..|.+.+...... +.......+.-.+..+|..+|+.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~ 159 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQT 159 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCH
Confidence 6667788899999999999988765443 22233445555566666655543
No 119
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.97 E-value=1.6e+02 Score=20.05 Aligned_cols=27 Identities=15% Similarity=-0.039 Sum_probs=19.2
Q ss_pred HHHHHhhhhccchHHHHHHHHHHHHhh
Q psy5735 181 LFRLANNYKENGLYEKALEKFTQLMTL 207 (247)
Q Consensus 181 l~~~a~~~~~~~~~e~al~~~~~~L~~ 207 (247)
++..+..+...+++++|+..+.+.+..
T Consensus 68 ~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 68 HRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 344455566778888888888887754
No 120
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=22.68 E-value=1.9e+02 Score=19.92 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=20.6
Q ss_pred ccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 190 ENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 190 ~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
..|++++|+..|.+.+... |.+ ..+.-.+..++...|+.
T Consensus 63 ~~g~~~~A~~~~~~al~l~-----P~~---~~~~~~la~~~~~~g~~ 101 (121)
T 1hxi_A 63 ENEKDGLAIIALNHARMLD-----PKD---IAVHAALAVSHTNEHNA 101 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHcCCH
Confidence 3455666666666555321 211 23445666777766654
No 121
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=22.54 E-value=1.1e+02 Score=23.53 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=36.4
Q ss_pred HhHHHHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHH
Q psy5735 176 QDTESLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQ 223 (247)
Q Consensus 176 q~~~~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~ 223 (247)
+-+..+++.|.....+|+.+.|.-.|..++..+. ..|-|.+|....
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~--kIpkHpdyk~~~ 85 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVYN--LIKKRPDFKQQQ 85 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HHTTSHHHHHTH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH--HHhcCcchhhhh
Confidence 4456688888889999999999999999988873 667777776544
No 122
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=21.52 E-value=69 Score=22.80 Aligned_cols=17 Identities=24% Similarity=0.276 Sum_probs=12.0
Q ss_pred ccccccccccchhhhhh
Q psy5735 155 FMIKCDKCDQFINIFKG 171 (247)
Q Consensus 155 ~~~~C~~C~~~~~~~~~ 171 (247)
..|.|-.|+.--++-+.
T Consensus 57 ~~~~Cf~cg~gGd~i~f 73 (103)
T 1d0q_A 57 QIFHCFGCGAGGNAFTF 73 (103)
T ss_dssp TEEEETTTCCEECHHHH
T ss_pred CEEEECCCCCCCCHHHH
Confidence 46999999976655433
No 123
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=21.39 E-value=89 Score=23.44 Aligned_cols=49 Identities=10% Similarity=0.010 Sum_probs=28.7
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 180 SLFRLANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 180 ~l~~~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
.++..+..+...|++++|+..|.+.+... |. ...+.-.+..++..+|+.
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----~~---~~~~~~~lg~~~~~~~~~ 87 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRD-----KH---LAVAYFQRGMLYYQTEKY 87 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----cc---chHHHHHHHHHHHHcccH
Confidence 34444555566777777777777766542 11 134455666677776654
No 124
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=21.23 E-value=51 Score=21.05 Aligned_cols=14 Identities=14% Similarity=0.057 Sum_probs=10.4
Q ss_pred cccccccccccchh
Q psy5735 154 QFMIKCDKCDQFIN 167 (247)
Q Consensus 154 ~~~~~C~~C~~~~~ 167 (247)
...|.|+.|+...+
T Consensus 34 P~dw~CP~Cga~K~ 47 (55)
T 2v3b_B 34 PADWVCPDCGVGKI 47 (55)
T ss_dssp CTTCCCTTTCCCGG
T ss_pred CCCCcCCCCCCCHH
Confidence 34799999997543
No 125
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=20.78 E-value=39 Score=22.08 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=14.7
Q ss_pred cccchh-hhhhhhhhHhHHHHHH--HHhhhhccchHHHHH
Q psy5735 162 CDQFIN-IFKGLKNLQDTESLFR--LANNYKENGLYEKAL 198 (247)
Q Consensus 162 C~~~~~-~~~~l~~lq~~~~l~~--~a~~~~~~~~~e~al 198 (247)
|++..+ +.+.+....+.++... +...++..|+|++|+
T Consensus 21 cH~EA~tIA~~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 21 CHQEAASIADWLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp CHHHHHHHHHHHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 444332 5555554433222222 366788899999886
No 126
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=20.73 E-value=2e+02 Score=22.89 Aligned_cols=12 Identities=17% Similarity=0.418 Sum_probs=9.3
Q ss_pred cccccccccchh
Q psy5735 156 MIKCDKCDQFIN 167 (247)
Q Consensus 156 ~~~C~~C~~~~~ 167 (247)
.|.|..|.....
T Consensus 54 ~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 54 AYTCVNCTERHP 65 (183)
T ss_dssp CCCCTTTCCSSS
T ss_pred eeECcCCCCCCC
Confidence 699999986544
No 127
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=20.58 E-value=2.2e+02 Score=22.32 Aligned_cols=24 Identities=8% Similarity=0.063 Sum_probs=13.3
Q ss_pred HHHhhhhccchHHHHHHHHHHHHh
Q psy5735 183 RLANNYKENGLYEKALEKFTQLMT 206 (247)
Q Consensus 183 ~~a~~~~~~~~~e~al~~~~~~L~ 206 (247)
..+......|++++|+..|.+.+.
T Consensus 10 ~~g~~~~~~g~~~~A~~~~~~al~ 33 (338)
T 3ro2_A 10 LEGERLCKSGDCRAGVSFFEAAVQ 33 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHh
Confidence 334444555666666666665554
No 128
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=20.37 E-value=1.7e+02 Score=22.15 Aligned_cols=44 Identities=7% Similarity=0.023 Sum_probs=21.7
Q ss_pred HhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhccc
Q psy5735 185 ANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQK 236 (247)
Q Consensus 185 a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~ 236 (247)
+.-....+++++|++.|.+.+... | ....+.-.+..+|..+|+.
T Consensus 49 ~~~~~~~~~~~~A~~~~~~al~~~------p--~~~~~~~~l~~~~~~~~~~ 92 (228)
T 4i17_A 49 GVCADNIKKYKEAADYFDIAIKKN------Y--NLANAYIGKSAAYRDMKNN 92 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTT------C--SHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhhcHHHHHHHHHHHHHhC------c--chHHHHHHHHHHHHHcccH
Confidence 333444555566665555554321 1 1334455566666666554
No 129
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=20.35 E-value=1.4e+02 Score=23.11 Aligned_cols=49 Identities=10% Similarity=0.228 Sum_probs=36.1
Q ss_pred HHhhhhccchHHHHHHHHHHHHhhhhhccCCCcccHHHHHHHHHHHHHHhcccc
Q psy5735 184 LANNYKENGLYEKALEKFTQLMTLLDENLVPPYRDYILCQRSIQTCFLNLGQKC 237 (247)
Q Consensus 184 ~a~~~~~~~~~e~al~~~~~~L~~~~~~l~~p~~~~~~~~~~l~~c~~~~g~~~ 237 (247)
.+..++..|++++|+..|.+++... |.......+...+..+|..+|+..
T Consensus 153 ~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 153 VAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHHHHHHHHHHHcCCcH
Confidence 4555677889999999999887542 333445577888888998888763
Done!