Your job contains 1 sequence.
>psy5744
MSTSDEGYVHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERK
MLRARISTLKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEME
ERDATSRSSFKCPRCLKTFTDLEPCLLVLWCACPCKR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5744
(157 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015828 - symbol:TfIIEalpha "Transcription factor ... 576 6.8e-56 1
UNIPROTKB|F1NTL4 - symbol:GTF2E1 "Uncharacterized protein... 462 8.1e-44 1
UNIPROTKB|A6QLI8 - symbol:GTF2E1 "General transcription f... 460 1.3e-43 1
UNIPROTKB|F1MGT5 - symbol:GTF2E1 "General transcription f... 460 1.3e-43 1
UNIPROTKB|E2R3P2 - symbol:GTF2E1 "Uncharacterized protein... 460 1.3e-43 1
UNIPROTKB|I3LMA9 - symbol:LOC100624061 "Uncharacterized p... 460 1.3e-43 1
MGI|MGI:1921447 - symbol:Gtf2e1 "general transcription fa... 453 7.3e-43 1
UNIPROTKB|G3V992 - symbol:Gtf2e1 "General transcription f... 453 7.3e-43 1
UNIPROTKB|P29083 - symbol:GTF2E1 "General transcription f... 452 9.3e-43 1
ZFIN|ZDB-GENE-041210-221 - symbol:gtf2e1 "general transcr... 451 1.2e-42 1
UNIPROTKB|E1BY73 - symbol:LOC428778 "Uncharacterized prot... 438 2.8e-41 1
UNIPROTKB|E9PER7 - symbol:GTF2E1 "General transcription f... 379 5.1e-35 1
WB|WBGene00013998 - symbol:ZK550.4.2 species:6239 "Caenor... 241 6.8e-20 1
DICTYBASE|DDB_G0273583 - symbol:gtf2e1-2 "transcription f... 178 6.5e-13 1
DICTYBASE|DDB_G0273525 - symbol:gtf2e1-1 "transcription f... 178 6.5e-13 1
SGD|S000001511 - symbol:TFA1 "TFIIE small subunit" specie... 174 2.0e-12 1
CGD|CAL0005399 - symbol:TFA1 species:5476 "Candida albica... 169 4.5e-12 1
ASPGD|ASPL0000006628 - symbol:AN6166 species:162425 "Emer... 161 4.2e-11 1
UNIPROTKB|C9J329 - symbol:GTF2E1 "General transcription f... 137 2.2e-09 1
POMBASE|SPAC458.07 - symbol:tfa1 "transcription factor TF... 142 4.8e-09 1
TAIR|locus:2121524 - symbol:AT4G20810 species:3702 "Arabi... 117 2.3e-06 1
GENEDB_PFALCIPARUM|MAL7P1.86 - symbol:MAL7P1.86 "transcri... 113 1.7e-05 1
UNIPROTKB|C0H4N3 - symbol:MAL7P1.86 "Transcription initia... 113 1.7e-05 1
TAIR|locus:2128590 - symbol:AT4G20340 species:3702 "Arabi... 83 0.00054 2
>FB|FBgn0015828 [details] [associations]
symbol:TfIIEalpha "Transcription factor IIEalpha"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005673 "transcription factor TFIIE complex"
evidence=ISS;IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR002853 InterPro:IPR017919 PROSITE:PS51344
SMART:SM00531 Pfam:PF02002 EMBL:AE014296 GO:GO:0043565
GO:GO:0045944 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367
KO:K03136 InterPro:IPR024550 eggNOG:COG1675 InterPro:IPR021600
Pfam:PF11521 OMA:QNVVISM GeneTree:ENSGT00390000016696 GO:GO:0005673
EMBL:U72892 EMBL:AY119499 RefSeq:NP_524026.1 UniGene:Dm.2666
SMR:O96880 IntAct:O96880 MINT:MINT-928542 STRING:O96880
EnsemblMetazoa:FBtr0076108 GeneID:39313 KEGG:dme:Dmel_CG10415
UCSC:CG10415-RA CTD:39313 FlyBase:FBgn0015828 InParanoid:O96880
OrthoDB:EOG4MPG5N GenomeRNAi:39313 NextBio:813002 Uniprot:O96880
Length = 429
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 112/136 (82%), Positives = 125/136 (91%)
Query: 8 YVHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIS 67
YV TEVP+SLKQL+RLVVRGFYS+ED+LIIDMLVRNPCMKEDDI ELL+FE+K LRARI+
Sbjct: 20 YV-TEVPSSLKQLARLVVRGFYSLEDALIIDMLVRNPCMKEDDIGELLRFEKKQLRARIT 78
Query: 68 TLKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSR 127
TL+ DK IQ RL+METG DGKAQKVNYYFINY+TFVN+VKYKLD+MRKRME EERDATSR
Sbjct: 79 TLRTDKFIQIRLKMETGPDGKAQKVNYYFINYKTFVNVVKYKLDLMRKRMETEERDATSR 138
Query: 128 SSFKCPRCLKTFTDLE 143
+SFKC C KTFTDLE
Sbjct: 139 ASFKCSSCSKTFTDLE 154
>UNIPROTKB|F1NTL4 [details] [associations]
symbol:GTF2E1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 GO:GO:0006355 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367
InterPro:IPR024550 InterPro:IPR021600 Pfam:PF11521 OMA:QNVVISM
GeneTree:ENSGT00390000016696 EMBL:AADN02037931 EMBL:AADN02037929
EMBL:AADN02037930 IPI:IPI00600774 Ensembl:ENSGALT00000024112
Uniprot:F1NTL4
Length = 442
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 84/135 (62%), Positives = 111/135 (82%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ VVRGFY IE +L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++T
Sbjct: 7 VLTEVPAALKRLAKYVVRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLRSVLNT 66
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+ VN+VKYKLD MR+R+E +ERD+T+R+
Sbjct: 67 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERDSTNRA 126
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 127 SFKCPICFSTFTDLE 141
>UNIPROTKB|A6QLI8 [details] [associations]
symbol:GTF2E1 "General transcription factor IIE subunit 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006367 KO:K03136 InterPro:IPR024550 EMBL:BC147980
IPI:IPI00701956 RefSeq:NP_001096764.1 UniGene:Bt.9665
ProteinModelPortal:A6QLI8 SMR:A6QLI8 STRING:A6QLI8 PRIDE:A6QLI8
GeneID:540525 KEGG:bta:540525 CTD:2960 eggNOG:COG1675
HOGENOM:HOG000007666 HOVERGEN:HBG008614 InParanoid:A6QLI8
OrthoDB:EOG47D9G9 NextBio:20878682 InterPro:IPR021600 Pfam:PF11521
Uniprot:A6QLI8
Length = 438
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 83/135 (61%), Positives = 111/135 (82%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE +L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ERD+T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCSSTFTDLE 140
>UNIPROTKB|F1MGT5 [details] [associations]
symbol:GTF2E1 "General transcription factor IIE subunit 1"
species:9913 "Bos taurus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 GO:GO:0006355 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367
InterPro:IPR024550 IPI:IPI00701956 InterPro:IPR021600 Pfam:PF11521
OMA:QNVVISM GeneTree:ENSGT00390000016696 EMBL:DAAA02001566
EMBL:DAAA02001567 EMBL:DAAA02001568 Ensembl:ENSBTAT00000055844
Uniprot:F1MGT5
Length = 439
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 83/135 (61%), Positives = 111/135 (82%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE +L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ERD+T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCSSTFTDLE 140
>UNIPROTKB|E2R3P2 [details] [associations]
symbol:GTF2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 GO:GO:0006355 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367
InterPro:IPR024550 InterPro:IPR021600 Pfam:PF11521 OMA:QNVVISM
GeneTree:ENSGT00390000016696 EMBL:AAEX03017020
Ensembl:ENSCAFT00000017975 NextBio:20861457 Uniprot:E2R3P2
Length = 460
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 83/135 (61%), Positives = 111/135 (82%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE +L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ERD+T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCSSTFTDLE 140
>UNIPROTKB|I3LMA9 [details] [associations]
symbol:LOC100624061 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 GO:GO:0006355 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367 KO:K03136
InterPro:IPR024550 InterPro:IPR021600 Pfam:PF11521 OMA:QNVVISM
GeneTree:ENSGT00390000016696 RefSeq:XP_003361927.1
Ensembl:ENSSSCT00000022377 GeneID:100624061 KEGG:ssc:100624061
Uniprot:I3LMA9
Length = 438
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 83/135 (61%), Positives = 111/135 (82%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE +L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ERD+T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCSSTFTDLE 140
>MGI|MGI:1921447 [details] [associations]
symbol:Gtf2e1 "general transcription factor II E,
polypeptide 1 (alpha subunit)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
MGI:MGI:1921447 Pfam:PF02002 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006367 KO:K03136 InterPro:IPR024550
CTD:2960 eggNOG:COG1675 HOGENOM:HOG000007666 HOVERGEN:HBG008614
OrthoDB:EOG47D9G9 InterPro:IPR021600 Pfam:PF11521 OMA:QNVVISM
EMBL:AK011543 EMBL:AK031528 EMBL:AK154283 EMBL:BC056966
IPI:IPI00132417 RefSeq:NP_083088.1 UniGene:Mm.287795
ProteinModelPortal:Q9D0D5 SMR:Q9D0D5 STRING:Q9D0D5
PhosphoSite:Q9D0D5 PaxDb:Q9D0D5 PRIDE:Q9D0D5
Ensembl:ENSMUST00000023525 GeneID:74197 KEGG:mmu:74197
UCSC:uc007zeb.1 GeneTree:ENSGT00390000016696 InParanoid:Q9D0D5
NextBio:340074 Bgee:Q9D0D5 Genevestigator:Q9D0D5
GermOnline:ENSMUSG00000022828 Uniprot:Q9D0D5
Length = 440
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 82/135 (60%), Positives = 110/135 (81%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHVLALDILIRNPCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ER++T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERNSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCCSTFTDLE 140
>UNIPROTKB|G3V992 [details] [associations]
symbol:Gtf2e1 "General transcription factor II E,
polypeptide 1 (Alpha subunit)" species:10116 "Rattus norvegicus"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 GO:GO:0006355 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367 KO:K03136
InterPro:IPR024550 EMBL:CH473967 CTD:2960 InterPro:IPR021600
Pfam:PF11521 OMA:QNVVISM GeneTree:ENSGT00390000016696
RefSeq:NP_001094026.1 UniGene:Rn.106817 ProteinModelPortal:G3V992
PRIDE:G3V992 Ensembl:ENSRNOT00000042864 GeneID:303918
KEGG:rno:303918 RGD:1306851 NextBio:652325 Uniprot:G3V992
Length = 438
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 82/135 (60%), Positives = 110/135 (81%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE L +D+L+RNPC+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHVLALDILIRNPCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ER++T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERNSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCCSTFTDLE 140
>UNIPROTKB|P29083 [details] [associations]
symbol:GTF2E1 "General transcription factor IIE subunit 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
Reactome:REACT_71 InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 Reactome:REACT_116125 GO:GO:0019048 GO:GO:0005654
GO:GO:0016032 GO:GO:0006355 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006368
GO:GO:0006367 Reactome:REACT_1788 KO:K03136 InterPro:IPR024550
CTD:2960 eggNOG:COG1675 HOGENOM:HOG000007666 HOVERGEN:HBG008614
InterPro:IPR021600 Pfam:PF11521 EMBL:S67859 EMBL:X63468
IPI:IPI00019977 PIR:S29291 RefSeq:NP_005504.2 UniGene:Hs.445272
PDB:1VD4 PDB:2JTX PDB:2RNQ PDB:2RNR PDBsum:1VD4 PDBsum:2JTX
PDBsum:2RNQ PDBsum:2RNR ProteinModelPortal:P29083 SMR:P29083
DIP:DIP-717N MINT:MINT-1894058 STRING:P29083 PhosphoSite:P29083
DMDM:116242812 PaxDb:P29083 PeptideAtlas:P29083 PRIDE:P29083
DNASU:2960 Ensembl:ENST00000283875 GeneID:2960 KEGG:hsa:2960
UCSC:uc003edz.4 GeneCards:GC03P120461 HGNC:HGNC:4650 HPA:CAB009884
MIM:189962 neXtProt:NX_P29083 PharmGKB:PA29036 InParanoid:P29083
OMA:QNVVISM PhylomeDB:P29083 ChiTaRS:GTF2E1
EvolutionaryTrace:P29083 GenomeRNAi:2960 NextBio:11734
PMAP-CutDB:P29083 ArrayExpress:P29083 Bgee:P29083 CleanEx:HS_GTF2E1
Genevestigator:P29083 GermOnline:ENSG00000153767 Uniprot:P29083
Length = 439
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 82/135 (60%), Positives = 110/135 (81%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE +L +D+L+RN C+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNSCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ERD+T+R+
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRA 125
Query: 129 SFKCPRCLKTFTDLE 143
SFKCP C TFTDLE
Sbjct: 126 SFKCPVCSSTFTDLE 140
>ZFIN|ZDB-GENE-041210-221 [details] [associations]
symbol:gtf2e1 "general transcription factor IIE,
polypeptide 1, alpha" species:7955 "Danio rerio" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002853 InterPro:IPR013137 InterPro:IPR017919
Pfam:PF08271 PROSITE:PS51344 SMART:SM00531 Pfam:PF02002
ZFIN:ZDB-GENE-041210-221 GO:GO:0006355 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367 KO:K03136
InterPro:IPR024550 EMBL:AL772198 CTD:2960 HOGENOM:HOG000007666
HOVERGEN:HBG008614 InterPro:IPR021600 Pfam:PF11521
GeneTree:ENSGT00390000016696 EMBL:CR536605 IPI:IPI00491942
RefSeq:NP_001038610.1 UniGene:Dr.84089 SMR:Q5SQE1 STRING:Q5SQE1
Ensembl:ENSDART00000000566 Ensembl:ENSDART00000138386 GeneID:567899
KEGG:dre:567899 InParanoid:Q5SQE1 OMA:ENINLSH NextBio:20888906
Uniprot:Q5SQE1
Length = 447
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 81/133 (60%), Positives = 110/133 (82%)
Query: 11 TEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARISTLK 70
TEVP SLK+L++ VVRGFY IE +L +D+L+RNPC++E+D+ ELLKF+RK LR+ ++TLK
Sbjct: 8 TEVPASLKRLAKQVVRGFYGIEHALALDVLIRNPCVREEDMLELLKFDRKQLRSVLNTLK 67
Query: 71 NDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRSSF 130
DK ++ R+R+ET DGK + NYYFINY+ VN+VKYKLD MR+R+E +ERD+T+R+SF
Sbjct: 68 ADKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERDSTNRASF 127
Query: 131 KCPRCLKTFTDLE 143
+CP C TFTDLE
Sbjct: 128 RCPCCTNTFTDLE 140
>UNIPROTKB|E1BY73 [details] [associations]
symbol:LOC428778 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR002853
InterPro:IPR017919 PROSITE:PS51344 SMART:SM00531 Pfam:PF02002
GO:GO:0043565 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367
InterPro:IPR024550 InterPro:IPR021600 Pfam:PF11521
GeneTree:ENSGT00390000016696 EMBL:AADN02031387 IPI:IPI00603008
Ensembl:ENSGALT00000022126 OMA:HNYYYIN NextBio:20829684
Uniprot:E1BY73
Length = 422
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 77/139 (55%), Positives = 112/139 (80%)
Query: 5 DEGYVHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRA 64
+E V TEVP +LK+L++ VRGFY +E SL +D+L R PC+KEDD+ +LLK+ERK LR
Sbjct: 2 EEQNVTTEVPAALKRLAKYTVRGFYGVEYSLAVDVLTRYPCVKEDDLLQLLKYERKQLRT 61
Query: 65 RISTLKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDA 124
++TLK+DK ++ R+R+ETG +GK+ + NYY+INY+ V+++KYKLD +R+++E +ERD+
Sbjct: 62 VLNTLKSDKFVKLRMRVETGPNGKSTRHNYYYINYKVLVDVIKYKLDHVRRKIEADERDS 121
Query: 125 TSRSSFKCPRCLKTFTDLE 143
T+RSSFKCP C T+TDLE
Sbjct: 122 TTRSSFKCPSCSSTYTDLE 140
>UNIPROTKB|E9PER7 [details] [associations]
symbol:GTF2E1 "General transcription factor IIE subunit 1"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR017919 PROSITE:PS51344
Pfam:PF02002 GO:GO:0043565 InterPro:IPR024550 HGNC:HGNC:4650
ChiTaRS:GTF2E1 EMBL:AC117472 IPI:IPI00945276
ProteinModelPortal:E9PER7 Ensembl:ENST00000492959
ArrayExpress:E9PER7 Bgee:E9PER7 Uniprot:E9PER7
Length = 122
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 69/117 (58%), Positives = 95/117 (81%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARIST 68
V TEVP +LK+L++ V+RGFY IE +L +D+L+RN C+KE+D+ ELLKF+RK LR+ ++
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNSCVKEEDMLELLKFDRKQLRSVLNN 65
Query: 69 LKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDAT 125
LK DK I+ R+R+ET DGK + NYYFINY+T VN+VKYKLD MR+R+E +ERD+T
Sbjct: 66 LKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDST 122
>WB|WBGene00013998 [details] [associations]
symbol:ZK550.4.2 species:6239 "Caenorhabditis elegans"
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000988 "protein
binding transcription factor activity" evidence=IDA] [GO:0005673
"transcription factor TFIIE complex" evidence=IPI]
InterPro:IPR002853 InterPro:IPR013137 InterPro:IPR017919
Pfam:PF08271 PROSITE:PS51344 SMART:SM00531 Pfam:PF02002
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006355 GO:GO:0043565 GO:GO:0008270 GO:GO:0010171
GO:GO:0040011 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006367
GO:GO:0000988 KO:K03136 InterPro:IPR024550 InterPro:IPR021600
Pfam:PF11521 GeneTree:ENSGT00390000016696 GO:GO:0005673 EMBL:Y08816
EMBL:Z82287 PIR:T27910 RefSeq:NP_503060.1 ProteinModelPortal:G5EG49
SMR:G5EG49 EnsemblMetazoa:ZK550.4.1 EnsemblMetazoa:ZK550.4.2
GeneID:178502 KEGG:cel:CELE_ZK550.4 CTD:178502 WormBase:ZK550.4
OMA:LESREQM NextBio:901388 Uniprot:G5EG49
Length = 433
Score = 241 (89.9 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 43/142 (30%), Positives = 90/142 (63%)
Query: 2 STSDEGYVHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKM 61
S E V E+P +L + +VV+ F+S E +I+ ++R C++E+++ ++F++KM
Sbjct: 12 SAHTETQVVDEIPEALNTILLMVVKNFFSSEHFIIVYHIMRAQCIREENLKARIQFDQKM 71
Query: 62 LRARISTLKNDKIIQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEE 121
LR +++LK +K+++ R + + + + +Y+INY+ +N+V+YK+D MR+++E E
Sbjct: 72 LRQLLASLKAEKLVKERTITQKNENNRTVSIIFYYINYRAVLNVVRYKIDHMRQKLESRE 131
Query: 122 RDATSRSSFKCPRCLKTFTDLE 143
+ T+R+ ++C C ++ LE
Sbjct: 132 QMDTNRAHYRCGACQSSYDMLE 153
>DICTYBASE|DDB_G0273583 [details] [associations]
symbol:gtf2e1-2 "transcription factor IIE"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017919 PROSITE:PS51344 dictyBase:DDB_G0273583
dictyBase:DDB_G0273525 Pfam:PF02002 GO:GO:0005634 GO:GO:0005615
GO:GO:0006355 GO:GO:0046872 GO:GO:0043565 GenomeReviews:CM000151_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010 KO:K03136
InterPro:IPR024550 eggNOG:COG1675 RefSeq:XP_002649185.1
RefSeq:XP_644607.1 ProteinModelPortal:Q557M8
EnsemblProtists:DDB0231096 EnsemblProtists:DDB0266401
GeneID:8618971 GeneID:8619006 KEGG:ddi:DDB_G0273525
KEGG:ddi:DDB_G0273583 OMA:SYTINTN ProtClustDB:CLSZ2729226
Uniprot:Q557M8
Length = 456
Score = 178 (67.7 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 17 LKQLSRLVVRGFYSIEDSLIIDMLVRNPC-MKEDDICELLKFERKMLRARISTLKNDKII 75
L L ++V+R FY E ++IID L+R +K++D+ L+ ++K +R + LK D ++
Sbjct: 11 LDDLVKMVIRAFYPDEYAVIIDGLLREKKRIKDEDLALRLRIQQKYVRKILMDLKGDSMV 70
Query: 76 QTR-LRMET-GLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRSSFKCP 133
++ +++E G + + ++I+Y+ ++IVKYKL + RK+ME + ++KC
Sbjct: 71 KSSDVKVEAKGPNERGSTHLLWYIDYKHIIDIVKYKLYMFRKKMESVKVQKIDVQTYKCQ 130
Query: 134 RCLKTFTDLE-PCLL 147
C K +T L+ P LL
Sbjct: 131 TCHKVYTALDIPKLL 145
>DICTYBASE|DDB_G0273525 [details] [associations]
symbol:gtf2e1-1 "transcription factor IIE"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017919 PROSITE:PS51344 dictyBase:DDB_G0273583
dictyBase:DDB_G0273525 Pfam:PF02002 GO:GO:0005634 GO:GO:0005615
GO:GO:0006355 GO:GO:0046872 GO:GO:0043565 GenomeReviews:CM000151_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010 KO:K03136
InterPro:IPR024550 eggNOG:COG1675 RefSeq:XP_002649185.1
RefSeq:XP_644607.1 ProteinModelPortal:Q557M8
EnsemblProtists:DDB0231096 EnsemblProtists:DDB0266401
GeneID:8618971 GeneID:8619006 KEGG:ddi:DDB_G0273525
KEGG:ddi:DDB_G0273583 OMA:SYTINTN ProtClustDB:CLSZ2729226
Uniprot:Q557M8
Length = 456
Score = 178 (67.7 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 17 LKQLSRLVVRGFYSIEDSLIIDMLVRNPC-MKEDDICELLKFERKMLRARISTLKNDKII 75
L L ++V+R FY E ++IID L+R +K++D+ L+ ++K +R + LK D ++
Sbjct: 11 LDDLVKMVIRAFYPDEYAVIIDGLLREKKRIKDEDLALRLRIQQKYVRKILMDLKGDSMV 70
Query: 76 QTR-LRMET-GLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRSSFKCP 133
++ +++E G + + ++I+Y+ ++IVKYKL + RK+ME + ++KC
Sbjct: 71 KSSDVKVEAKGPNERGSTHLLWYIDYKHIIDIVKYKLYMFRKKMESVKVQKIDVQTYKCQ 130
Query: 134 RCLKTFTDLE-PCLL 147
C K +T L+ P LL
Sbjct: 131 TCHKVYTALDIPKLL 145
>SGD|S000001511 [details] [associations]
symbol:TFA1 "TFIIE small subunit" species:4932 "Saccharomyces
cerevisiae" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0001113 "transcriptional open complex
formation at RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0000993 "RNA polymerase II core binding" evidence=IDA;IPI]
[GO:0001097 "TFIIH-class transcription factor binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IDA] InterPro:IPR002853 InterPro:IPR013137
InterPro:IPR017919 Pfam:PF08271 PROSITE:PS51344 SMART:SM00531
SGD:S000001511 Pfam:PF02002 GO:GO:0005739 GO:GO:0006355
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 EMBL:BK006944
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K00432 RefSeq:NP_012899.3
GeneID:853842 KEGG:sce:YKL026C RefSeq:NP_012897.3 GeneID:853840
KEGG:sce:YKL028W KO:K03136 GO:GO:0001113 InterPro:IPR024550
eggNOG:COG1675 GeneTree:ENSGT00390000016696 OrthoDB:EOG4N33Z7
GO:GO:0005673 EMBL:U12825 EMBL:Z28028 PIR:S37845
ProteinModelPortal:P36100 SMR:P36100 DIP:DIP-1700N IntAct:P36100
MINT:MINT-393612 STRING:P36100 PaxDb:P36100 PeptideAtlas:P36100
EnsemblFungi:YKL028W CYGD:YKL028w HOGENOM:HOG000246773 OMA:PLMELIN
NextBio:975049 Genevestigator:P36100 GermOnline:YKL028W
Uniprot:P36100
Length = 482
Score = 174 (66.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 38/133 (28%), Positives = 75/133 (56%)
Query: 17 LKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARISTLKNDKIIQ 76
+K L + VVRGFY L++D ++ + + EDD+ +LL + L I+ L++D++I
Sbjct: 9 VKNLLKFVVRGFYGGSFVLVLDAILFHSVLAEDDLKQLLSINKTELGPLIARLRSDRLIS 68
Query: 77 TRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSR-SSFKCPRC 135
+ E + K+ + YY++ Y ++ +K+K+ + +R++ ++ D S + + CP C
Sbjct: 69 IHKQREYPPNSKSVERVYYYVKYPHAIDAIKWKVHQVVQRLK-DDLDKNSEPNGYMCPIC 127
Query: 136 LKTFTDLEPCLLV 148
L +T LE L+
Sbjct: 128 LTKYTQLEAVQLL 140
>CGD|CAL0005399 [details] [associations]
symbol:TFA1 species:5476 "Candida albicans" [GO:0005673
"transcription factor TFIIE complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0001097 "TFIIH-class transcription
factor binding" evidence=IEA] [GO:0000993 "RNA polymerase II core
binding" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0001113 "transcriptional open complex formation
at RNA polymerase II promoter" evidence=IEA] InterPro:IPR017919
PROSITE:PS51344 CGD:CAL0005399 Pfam:PF02002 GO:GO:0043565
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACQ01000001
EMBL:AACQ01000002 KO:K03136 InterPro:IPR024550 eggNOG:COG1675
HOGENOM:HOG000246773 RefSeq:XP_723347.1 RefSeq:XP_723537.1
ProteinModelPortal:Q5APB4 STRING:Q5APB4 GeneID:3634850
GeneID:3634981 KEGG:cal:CaO19.12314 KEGG:cal:CaO19.4851
Uniprot:Q5APB4
Length = 394
Score = 169 (64.5 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 37/128 (28%), Positives = 68/128 (53%)
Query: 16 SLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARISTLKNDKII 75
S++ L R V RGFYS LI+D ++R+ + EDD+ LL +RK LR+ + L +D+++
Sbjct: 4 SVRSLIRFVSRGFYSTPYVLILDAVLRHSVLSEDDLIHLLGIKRKELRSLCNRLVDDRLL 63
Query: 76 QTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRSSFKCPRC 135
++ E K Y+FI+ ++ +K+K+ + ++ E + + CPRC
Sbjct: 64 TNHIQREDNGQQKYVTRTYFFIHITEAIDSIKWKVHSIVNVLKQEMSSFGNPQGYVCPRC 123
Query: 136 LKTFTDLE 143
+ L+
Sbjct: 124 GNKVSQLD 131
>ASPGD|ASPL0000006628 [details] [associations]
symbol:AN6166 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
InterPro:IPR017919 PROSITE:PS51344 Pfam:PF02002 GO:GO:0043565
EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000105 KO:K03136 InterPro:IPR024550 eggNOG:COG1675
OMA:PLMELIN RefSeq:XP_663770.1 STRING:Q5AZW4
EnsemblFungi:CADANIAT00006844 GeneID:2871140 KEGG:ani:AN6166.2
HOGENOM:HOG000213973 OrthoDB:EOG49CTH8 Uniprot:Q5AZW4
Length = 436
Score = 161 (61.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 20 LSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARISTLKNDKIIQTRL 79
L R V R FY LI+D L + + +D+ LL ++K LR + L+ D++I
Sbjct: 7 LIRTVARSFYETRHILIVDALFIHSVLHAEDLAFLLGMQQKDLRKLCAKLREDRLIAVNT 66
Query: 80 RMETGLDGKAQKVN--YYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRSSFKCPRCLK 137
R E DG + VN YY+I ++ +KYK+ + ++++ + R + C RC
Sbjct: 67 RAEIR-DGSTRPVNREYYYIPLHPVIDAIKYKVSKLTSTIKLQYTPSQERKEYICLRCGA 125
Query: 138 TFTDLE 143
+T+L+
Sbjct: 126 EWTELD 131
>UNIPROTKB|C9J329 [details] [associations]
symbol:GTF2E1 "General transcription factor IIE subunit 1"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR017919 PROSITE:PS51344
Pfam:PF02002 GO:GO:0043565 InterPro:IPR024550 OrthoDB:EOG47D9G9
HGNC:HGNC:4650 ChiTaRS:GTF2E1 EMBL:AC117472 IPI:IPI00945436
ProteinModelPortal:C9J329 STRING:C9J329 Ensembl:ENST00000484715
ArrayExpress:C9J329 Bgee:C9J329 Uniprot:C9J329
Length = 49
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 9 VHTEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDI 51
V TEVP +LK+L++ V+RGFY IE +L +D+L+RN C+KE+D+
Sbjct: 6 VLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNSCVKEEDM 48
>POMBASE|SPAC458.07 [details] [associations]
symbol:tfa1 "transcription factor TFIIE alpha subunit,
TFIIEA, Tfa1" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005673 "transcription
factor TFIIE complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IDA]
InterPro:IPR017919 PROSITE:PS51344 PomBase:SPAC458.07 Pfam:PF02002
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0043565 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0051290
GO:GO:0006367 GO:GO:0000991 InterPro:IPR024550 eggNOG:COG1675
EMBL:AF237419 EMBL:AJ310560 EMBL:AB176672 PIR:T50301
RefSeq:NP_594701.3 IntAct:Q9P3W1 STRING:Q9P3W1
EnsemblFungi:SPAC458.07.1 GeneID:2543627 OrthoDB:EOG4N33Z7
NextBio:20804633 GO:GO:0005673 Uniprot:Q9P3W1
Length = 434
Score = 142 (55.0 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 31/140 (22%), Positives = 71/140 (50%)
Query: 11 TEVPTSLKQLSRLVVRGFYSIEDSLIIDMLVRNPCMKEDDICELLKFERKMLRARISTLK 70
+ P +++L ++++R FY + +D ++R+ + ++ L+ K R L+
Sbjct: 2 SNAPEIVQRLIKMIMRAFYETRHIIFMDAILRHSALTDEQTALLMGIPIKECRFIAGKLR 61
Query: 71 NDKI--IQTRLRMETGLDGKAQKVNYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRS 128
D++ IQ+R M+ G + Y++I++ + ++ +K+++ + K +E R+
Sbjct: 62 EDRLLAIQSRTEMKEGQQ-RQYHTTYFYIDFCSTIDSIKWRMHQLVKTVEDRMRNDFDSK 120
Query: 129 SFKCPRCLKTFTDLEPCLLV 148
+ CP C K F+ L+ LV
Sbjct: 121 GYVCPFCNKKFSSLDVLSLV 140
>TAIR|locus:2121524 [details] [associations]
symbol:AT4G20810 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR017919 PROSITE:PS51344 Pfam:PF02002 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003743 EMBL:AL080254
EMBL:AL161553 KO:K03136 InterPro:IPR024550 HOGENOM:HOG000242737
ProtClustDB:CLSN2685322 IPI:IPI00517869 PIR:T10623
RefSeq:NP_193813.1 UniGene:At.54443 ProteinModelPortal:Q9SVG6
EnsemblPlants:AT4G20810.1 GeneID:827829 KEGG:ath:AT4G20810
TAIR:At4g20810 eggNOG:NOG321900 InParanoid:Q9SVG6 OMA:DHINRIK
PhylomeDB:Q9SVG6 Genevestigator:Q9SVG6 Uniprot:Q9SVG6
Length = 416
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 35 LIIDMLVRNPCMKEDDICELLKFERKMLRARISTLKNDKIIQTRLRMETG---LDGKAQ- 90
L++D L R ++E+D+ + LK K LR + + + I R E +G+ +
Sbjct: 34 LVLDALTRRQWVREEDLAKELKLNTKQLRTILRYFEEQQFIMRVHRKEKSSATTNGRGED 93
Query: 91 --KVNYYF---INYQTFVNIVKYKLDVMRKRMEMEERDATSRSSFKCPRCL-KTFTDLEP 144
KV+ Y ++Y ++++YKL M+K + D + + CP C K F E
Sbjct: 94 KVKVHMYSYCCLDYSQIYDVIRYKLHRMKKEFKDVLEDKDNVQEYGCPNCKRKIFFHCEN 153
Query: 145 CL--LVLWC 151
C LV+ C
Sbjct: 154 CNGELVMEC 162
>GENEDB_PFALCIPARUM|MAL7P1.86 [details] [associations]
symbol:MAL7P1.86 "transcription initiation
factor iie, alpha subunit, putative" species:5833 "Plasmodium
falciparum" [GO:0005673 "transcription factor TFIIE complex"
evidence=ISS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR017919
PROSITE:PS51344 Pfam:PF02002 GO:GO:0043565 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0003743 GO:GO:0006367 EMBL:AL844506
InterPro:IPR024550 GO:GO:0005673 RefSeq:XP_002808780.1
ProteinModelPortal:C0H4N3 EnsemblProtists:MAL7P1.86:mRNA
GeneID:2655049 KEGG:pfa:MAL7P1.86 EuPathDB:PlasmoDB:PF3D7_0717300
HOGENOM:HOG000283943 ProtClustDB:CLSZ2432511 Uniprot:C0H4N3
Length = 392
Score = 113 (44.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 24 VVRGFYSIEDSLIIDMLVRNPCMK-EDDICELLKFERKMLRARISTLKNDKIIQTRLRME 82
+ R F S E+ +I D+ + N C+ E DI + + +R+ +S L DK I
Sbjct: 23 ISRFFMSDEEIVIFDLFINNECLYLEKDIVNNINMNEQKIRSILSKLLKDKFI------- 75
Query: 83 TGLDGKAQKVNYYFINYQTFV---NIVKYKLDVMRKRMEMEERDATSRSS-FKCPRCLKT 138
++ + K N N+QTF N + Y LD K+ME E + + S + C C T
Sbjct: 76 --IEIQKYKNNEKGTNFQTFYCLNNYIVYVLDFRIKQMENELQKKKNESDIYICNFCNAT 133
Query: 139 FTDLEPCLLVL 149
++ L+ +L L
Sbjct: 134 YSQLDAQILPL 144
>UNIPROTKB|C0H4N3 [details] [associations]
symbol:MAL7P1.86 "Transcription initiation factor IIE,
alpha subunit, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0005673 "transcription factor TFIIE complex" evidence=ISS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISS] InterPro:IPR017919 PROSITE:PS51344
Pfam:PF02002 GO:GO:0043565 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0003743 GO:GO:0006367 EMBL:AL844506 InterPro:IPR024550
GO:GO:0005673 RefSeq:XP_002808780.1 ProteinModelPortal:C0H4N3
EnsemblProtists:MAL7P1.86:mRNA GeneID:2655049 KEGG:pfa:MAL7P1.86
EuPathDB:PlasmoDB:PF3D7_0717300 HOGENOM:HOG000283943
ProtClustDB:CLSZ2432511 Uniprot:C0H4N3
Length = 392
Score = 113 (44.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 24 VVRGFYSIEDSLIIDMLVRNPCMK-EDDICELLKFERKMLRARISTLKNDKIIQTRLRME 82
+ R F S E+ +I D+ + N C+ E DI + + +R+ +S L DK I
Sbjct: 23 ISRFFMSDEEIVIFDLFINNECLYLEKDIVNNINMNEQKIRSILSKLLKDKFI------- 75
Query: 83 TGLDGKAQKVNYYFINYQTFV---NIVKYKLDVMRKRMEMEERDATSRSS-FKCPRCLKT 138
++ + K N N+QTF N + Y LD K+ME E + + S + C C T
Sbjct: 76 --IEIQKYKNNEKGTNFQTFYCLNNYIVYVLDFRIKQMENELQKKKNESDIYICNFCNAT 133
Query: 139 FTDLEPCLLVL 149
++ L+ +L L
Sbjct: 134 YSQLDAQILPL 144
>TAIR|locus:2128590 [details] [associations]
symbol:AT4G20340 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002853 InterPro:IPR017919 PROSITE:PS51344 SMART:SM00531
Pfam:PF02002 EMBL:CP002687 GO:GO:0043565 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006367 KO:K03136 InterPro:IPR024550
OMA:PLMELIN IPI:IPI00530445 RefSeq:NP_193767.2 UniGene:At.32725
ProteinModelPortal:F4JUV3 SMR:F4JUV3 EnsemblPlants:AT4G20340.1
GeneID:827782 KEGG:ath:AT4G20340 Uniprot:F4JUV3
Length = 475
Score = 83 (34.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 93 NYYFINYQTFVNIVKYKLDVMRKRMEMEERDATSRSSFKCPRCLKTFTDLEPCLLV 148
+Y ++Y +IV+YKL ++K+ + E D + + CP C + + L+ L+
Sbjct: 129 SYCCLDYAQIYDIVRYKLHRLKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLI 184
Score = 64 (27.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 35 LIIDMLVRNPCMKEDDICELLKFERKMLRARISTLKNDKIIQTRLRMETGLDGK 88
+++D L R ++E+D+ + +K K LR I + K + R ET K
Sbjct: 52 IVLDALTRRQWVREEDLAKEVKRNAKELRKLIRHFEEQKFVMRYHRKETAKRAK 105
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 157 157 0.00079 106 3 11 22 0.42 31
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 592 (63 KB)
Total size of DFA: 140 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 17.67u 0.08s 17.75t Elapsed: 00:00:10
Total cpu time: 17.68u 0.08s 17.76t Elapsed: 00:00:11
Start: Thu Aug 15 11:18:57 2013 End: Thu Aug 15 11:19:08 2013