BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5746
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VZV5|CYHR1_DROME Cysteine and histidine-rich protein 1 homolog OS=Drosophila
melanogaster GN=CG32486 PE=2 SV=2
Length = 412
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 189/312 (60%), Gaps = 54/312 (17%)
Query: 35 DKLEQRLGGILCCAVCLDLPRSAVY--QMQDFVMK--LLHVLTVG-------------LK 77
+KL R+ LCCAVCLDLP++A+Y QM + H+L G ++
Sbjct: 101 EKLAHRISNALCCAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPNCRVE 160
Query: 78 SARAVHHVTLLLRKLL-------------------------------TTCKYSMIGCPWC 106
+++ L + K T CKY IGC W
Sbjct: 161 ISKSTASRNLAVEKAASELPSECQFCNKEFPYKSLERHEQHECQERPTKCKYHRIGCQWR 220
Query: 107 GPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQM 166
GP HE HE +C HP KSG EVM +L+A + EK++++ L +LLSYEKIIFN+LQM
Sbjct: 221 GPYHETNEHERNCLHPQKSGYEVMAALEAHDDRIKEEKKMFNTLIDLLSYEKIIFNDLQM 280
Query: 167 KPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTA 226
KPYRTDE++HKLFYET+RFSAFN QWVVKARIN QRDP S++R +TYQLILKTKT+T
Sbjct: 281 KPYRTDEYVHKLFYETARFSAFNQQWVVKARINNSQRDPHQSNERTITYQLILKTKTSTP 340
Query: 227 MTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPD------TSECNRHLATKT 280
M++HF L+GPF DMKV +I+K EF E ES Y++LP PD +SECNR LA K
Sbjct: 341 MSIHFFALKGPFSDMKVSTQIYKHEFTETSTESEYYVLPLPDGVGGSGSSECNRMLANKG 400
Query: 281 INFRLIMFLASK 292
INFRL+MFL +K
Sbjct: 401 INFRLLMFLLNK 412
>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis
GN=cyhr1-b PE=2 SV=2
Length = 365
Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 178/318 (55%), Gaps = 48/318 (15%)
Query: 23 KKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMK----LLHVLT----- 73
KKR +A + +LE+RL +LCCAVCLDLP+++VYQ + + +H+L
Sbjct: 48 KKRLRSEAEPGSVRLEERLYSVLCCAVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLK 107
Query: 74 ---VGLKSARAVHHVTLLLRKL------------------------------------LT 94
+ R +L R L +T
Sbjct: 108 EEQATCPNCRCEISKSLCCRNLAVEKAISELPSDCGFCLKQFPRSLLERHKKEECQDRVT 167
Query: 95 TCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELL 154
CKY IGCPW GP HEL HE C HP K+G E+ME L ++ T E +LY+++F LL
Sbjct: 168 QCKYKRIGCPWQGPYHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLL 227
Query: 155 SYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMT 214
S+EKI + E+Q +PYRTD+FI +L+YET RF+ N WV+KAR+N +R+P LS R ++
Sbjct: 228 SFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLS 287
Query: 215 YQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNR 274
+QLILK+K + M F++L+GP+ D+K+ P I++F F + NE+ Y LP D+ ECN+
Sbjct: 288 FQLILKSKVNSPMECSFLLLKGPYDDVKIHPVIYQFVFTNENNETEYVPLPIIDSVECNK 347
Query: 275 HLATKTINFRLIMFLASK 292
LA K IN RL +F K
Sbjct: 348 LLAAKNINLRLFIFQIQK 365
>sp|Q6GNX1|CYR1A_XENLA Cysteine and histidine-rich protein 1-A OS=Xenopus laevis
GN=cyhr1-a PE=2 SV=2
Length = 365
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 176/318 (55%), Gaps = 48/318 (15%)
Query: 23 KKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMK----LLHVLT----- 73
KKR +A + +LE+RL +LCC VCLDLP+++VYQ + + +H+L
Sbjct: 48 KKRLRSEAEPGSVRLEERLYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLK 107
Query: 74 ---VGLKSARAVHHVTLLLRKL------------------------------------LT 94
+ R +L R L +T
Sbjct: 108 EEQATCPNCRCEISKSLCCRNLAVEKAVSELPSDCGFCLKQFPRSLLERHKKEECQDRVT 167
Query: 95 TCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELL 154
CKY IGCPW GP HEL HE C HP K+G E+ME L ++ T E +LY+++F LL
Sbjct: 168 QCKYKRIGCPWEGPYHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLL 227
Query: 155 SYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMT 214
S+EKI + E+Q +PYRTD+FI +L+YET RF+ N WV+KAR+N +R+P LS R ++
Sbjct: 228 SFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLS 287
Query: 215 YQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNR 274
+QLILK+K + M F++L+GP+ D+K+ P I+ F F + NE+ Y LP D+ ECN+
Sbjct: 288 FQLILKSKINSPMECSFLLLKGPYDDVKIHPVIYHFVFTNENNETEYVPLPIIDSVECNK 347
Query: 275 HLATKTINFRLIMFLASK 292
LA K IN RL +F K
Sbjct: 348 LLAAKNINLRLFIFQIQK 365
>sp|Q08CH8|CYHR1_DANRE Cysteine and histidine-rich protein 1 OS=Danio rerio GN=cyhr1 PE=2
SV=1
Length = 375
Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 182/332 (54%), Gaps = 49/332 (14%)
Query: 6 DQGISITNQIETEEPEAK-KRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDF 64
+ G+ + +P+A K+++ +A KLE+RL +LCC VCLDLP+++VYQ +
Sbjct: 40 ESGVRRDGSVGEADPDAPPKKRVRLQEGEAGKLEERLYSVLCCTVCLDLPKASVYQCTNG 99
Query: 65 VMK----LLHVLTVG-LKSARAV------------------------------------- 82
+ +H+L LK +A
Sbjct: 100 HLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECSYCLKQF 159
Query: 83 ------HHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAI 136
H T + +T CKY IGCPW GP HEL +HE C HP K+G E+M L +
Sbjct: 160 PRSGLDRHQTEECQDRVTQCKYKRIGCPWQGPFHELSAHEAECCHPSKTGMELMGILDEM 219
Query: 137 ETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKA 196
+ + E +LY+++F LL +EKI F E+Q +PYRTD+FI +L+YET RF+ N WV+KA
Sbjct: 220 DQSHRRELQLYNSIFSLLCFEKIGFTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKA 279
Query: 197 RINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQE 256
R+N +R+P LS R + +QLILK+K +A+ F++L+GP+ D+K++P I F+
Sbjct: 280 RVNDSERNPNLSCKRTLAFQLILKSKVNSALECSFLLLKGPYEDIKIKPVIQHHVFSNDA 339
Query: 257 NESPYFILPFPDTSECNRHLATKTINFRLIMF 288
NE+ Y LP D+ ECN+ LA K IN RL +F
Sbjct: 340 NETEYAPLPICDSVECNKLLAAKNINLRLFIF 371
>sp|Q6ZMK1|CYHR1_HUMAN Cysteine and histidine-rich protein 1 OS=Homo sapiens GN=CYHR1 PE=2
SV=2
Length = 362
Score = 221 bits (564), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 138/196 (70%)
Query: 93 LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
+T CKY IGCPW GP HEL HE +CAHP K+G+E+ME L ++ + E +LY+++F
Sbjct: 163 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS 222
Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
LLS+EKI + E+Q +PYRTD+FI +L+YET RF+ N WV+KAR+N +R+P LS R
Sbjct: 223 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 282
Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
+++QL+LK+K T + F++L+GP+ D+++ P I+ F F + NE+ Y LP D+ EC
Sbjct: 283 LSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVEC 342
Query: 273 NRHLATKTINFRLIMF 288
N+ LA K IN RL +F
Sbjct: 343 NKLLAAKNINLRLFLF 358
>sp|Q7YR89|CYHR1_BOVIN Cysteine and histidine-rich protein 1 OS=Bos taurus GN=CYHR1 PE=2
SV=2
Length = 311
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 138/200 (69%)
Query: 93 LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
+T CKY IGCPW GP HEL HE +CAHP K+G E+ME L ++ + E +LY+++F
Sbjct: 112 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFS 171
Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
LLS+EKI + E+Q +PYRTD+FI +L+YET RF+ N WV+KAR+N +R+P LS R
Sbjct: 172 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 231
Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
+++QL+LK+K T + F++L+GP+ D+K+ P I+ F F + NE+ Y LP D+ EC
Sbjct: 232 LSFQLLLKSKVTAPLECSFLLLKGPYDDVKISPVIYHFVFTNESNETDYVPLPIVDSVEC 291
Query: 273 NRHLATKTINFRLIMFLASK 292
N+ LA K IN RL +F K
Sbjct: 292 NKLLAAKNINLRLFLFQIQK 311
>sp|Q5BK76|CYHR1_RAT Cysteine and histidine-rich protein 1 OS=Rattus norvegicus GN=Cyhr1
PE=2 SV=2
Length = 311
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 138/200 (69%)
Query: 93 LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
+T CKY IGCPW GP HEL HE +CAHP K+G E+ME L ++ + E +LY+++F
Sbjct: 112 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFS 171
Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
LLS+EKI + E+Q +PYRTD+FI +L+YET RF+ N WV+KAR+N +R+P LS R
Sbjct: 172 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 231
Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
+++QL+LK+K T + F++L+GP+ D+++ P I+ F F + NE+ Y LP D+ EC
Sbjct: 232 LSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVEC 291
Query: 273 NRHLATKTINFRLIMFLASK 292
N+ LA K IN RL +F K
Sbjct: 292 NKLLAAKNINLRLFLFQIQK 311
>sp|Q9QXA1|CYHR1_MOUSE Cysteine and histidine-rich protein 1 OS=Mus musculus GN=Cyhr1 PE=1
SV=1
Length = 311
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 138/200 (69%)
Query: 93 LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
+T CKY IGCPW GP HEL HE +CAHP K+G E+ME L ++ + E +LY+++F
Sbjct: 112 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFS 171
Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
LLS+EKI + E+Q +PYRTD+FI +L+YET RF+ N WV+KAR+N +R+P LS R
Sbjct: 172 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 231
Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
+++QL+LK+K T + F++L+GP+ D+++ P I+ F F + NE+ Y LP D+ EC
Sbjct: 232 LSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVEC 291
Query: 273 NRHLATKTINFRLIMFLASK 292
N+ LA K IN RL +F K
Sbjct: 292 NKLLAAKNINLRLFLFQIQK 311
>sp|Q8RI94|DNLJ_FUSNN DNA ligase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC
25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=ligA PE=3
SV=1
Length = 696
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 112 LKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRT 171
LKSH ES G + + +ET+KDIEKR+ N +E E + PY T
Sbjct: 256 LKSHSESIKFLESMGIKTTGIFELLETSKDIEKRI--NYWE---------KERESLPYET 304
Query: 172 DEFIHKL----FYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAM 227
D + K+ ++ +++ +W + + Q L+ ++T+Q+ K T
Sbjct: 305 DGLVIKVDEINLWDEIGYTSKTPRWAIAYKFPAHQVSTVLN---DVTWQVGRTGKLTPVA 361
Query: 228 TVHFMVLRG 236
+ + L G
Sbjct: 362 ELQEVELSG 370
>sp|B6YUN0|SYM_THEON Methionine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=metG PE=3 SV=1
Length = 733
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 62 QDFVMKLL---HVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEES 118
QDF +K L H++ K A H K+ +Y + CP+CG +++ E
Sbjct: 105 QDFFLKALENDHLIKKVSKQAYCEHD------KMFLPDRYVIGTCPYCGAENQRGDQCEV 158
Query: 119 CAHP 122
C HP
Sbjct: 159 CGHP 162
>sp|Q59XY0|CWC22_CANAL Pre-mRNA-splicing factor CWC22 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CWC22 PE=3 SV=1
Length = 648
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 133 LQAIETTKDIEKRLYD-NLFELLSYEKIIFNELQMKPYRTDEFIHKLF 179
+Q IETTK+ E+++ D + ELL Y+K ++ + M +DE +HKL
Sbjct: 305 IQVIETTKNYEEKITDMSQSELLQYQKTVYLTI-MSSMSSDEAVHKLL 351
>sp|Q96BY6|DOC10_HUMAN Dedicator of cytokinesis protein 10 OS=Homo sapiens GN=DOCK10 PE=1
SV=3
Length = 2186
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 150 LFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRD 204
L E L YE +I EL+ K YR D LF+ + FSA W ++ +T D
Sbjct: 47 LLEPLDYETVI-EELE-KTYRNDPLQDLLFFPSDDFSAATVSWDIRTLYSTVPED 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,357,596
Number of Sequences: 539616
Number of extensions: 3768639
Number of successful extensions: 10438
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 10421
Number of HSP's gapped (non-prelim): 23
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)