Query psy5751
Match_columns 232
No_of_seqs 122 out of 1255
Neff 10.3
Searched_HMMs 46136
Date Fri Aug 16 17:07:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5751.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5751hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1214|consensus 100.0 1.4E-45 2.9E-50 308.9 21.3 229 1-232 1026-1254(1289)
2 KOG1214|consensus 100.0 1.1E-27 2.4E-32 202.0 18.9 211 10-229 989-1209(1289)
3 PF08450 SGL: SMP-30/Gluconola 100.0 2.6E-25 5.7E-30 173.7 27.4 213 1-226 1-233 (246)
4 PLN02919 haloacid dehalogenase 99.9 2.1E-22 4.5E-27 183.4 30.8 226 1-229 569-870 (1057)
5 KOG1215|consensus 99.9 5.9E-23 1.3E-27 185.9 24.8 220 1-226 438-660 (877)
6 PLN02919 haloacid dehalogenase 99.9 3.9E-20 8.4E-25 168.7 29.6 202 2-207 626-892 (1057)
7 COG3386 Gluconolactonase [Carb 99.9 1.3E-19 2.8E-24 144.0 21.0 207 2-217 27-257 (307)
8 PF08450 SGL: SMP-30/Gluconola 99.8 9.7E-18 2.1E-22 131.0 21.7 175 46-229 2-195 (246)
9 PF10282 Lactonase: Lactonase, 99.7 4.1E-13 9E-18 109.9 29.3 200 2-204 89-323 (345)
10 PF10282 Lactonase: Lactonase, 99.6 1.4E-12 3.1E-17 106.7 28.7 226 2-229 39-303 (345)
11 PRK11028 6-phosphogluconolacto 99.6 1.5E-12 3.2E-17 106.1 28.3 222 1-226 81-328 (330)
12 KOG1215|consensus 99.6 7.5E-14 1.6E-18 127.0 21.7 199 24-228 418-621 (877)
13 COG3391 Uncharacterized conser 99.6 1.7E-12 3.7E-17 107.5 25.5 223 1-229 32-264 (381)
14 PRK11028 6-phosphogluconolacto 99.6 4E-12 8.7E-17 103.5 26.9 223 2-228 37-284 (330)
15 KOG4659|consensus 99.6 2.3E-13 5E-18 120.8 19.8 195 1-208 366-627 (1899)
16 COG3391 Uncharacterized conser 99.5 2.7E-11 5.8E-16 100.4 25.3 221 2-229 76-310 (381)
17 PF06977 SdiA-regulated: SdiA- 99.5 7.7E-11 1.7E-15 91.1 25.5 195 2-200 24-247 (248)
18 COG3386 Gluconolactonase [Carb 99.5 6E-12 1.3E-16 100.4 19.6 186 37-230 18-225 (307)
19 TIGR02604 Piru_Ver_Nterm putat 99.5 5.9E-11 1.3E-15 97.9 24.4 221 1-230 15-333 (367)
20 COG4257 Vgb Streptogramin lyas 99.4 5.4E-11 1.2E-15 90.7 19.7 216 2-228 64-286 (353)
21 TIGR02604 Piru_Ver_Nterm putat 99.4 2.4E-11 5.1E-16 100.3 19.4 153 42-202 12-212 (367)
22 TIGR03866 PQQ_ABC_repeats PQQ- 99.4 1.9E-09 4.2E-14 85.9 28.6 216 2-226 75-299 (300)
23 PF07995 GSDH: Glucose / Sorbo 99.4 1.2E-09 2.5E-14 88.9 24.2 222 1-229 3-317 (331)
24 KOG4499|consensus 99.4 3E-10 6.5E-15 84.8 18.0 207 3-216 18-255 (310)
25 KOG1520|consensus 99.3 7.5E-11 1.6E-15 94.2 15.8 146 42-191 113-282 (376)
26 COG4257 Vgb Streptogramin lyas 99.3 9.6E-10 2.1E-14 84.0 19.7 205 1-214 105-316 (353)
27 KOG1520|consensus 99.3 1.9E-10 4.2E-15 91.9 14.8 179 43-226 64-273 (376)
28 TIGR03866 PQQ_ABC_repeats PQQ- 99.3 4.7E-08 1E-12 77.8 28.4 196 2-204 33-238 (300)
29 COG2706 3-carboxymuconate cycl 99.3 3.8E-08 8.2E-13 77.8 26.0 204 2-208 91-326 (346)
30 KOG4659|consensus 99.2 2.9E-10 6.3E-15 101.7 14.9 190 3-203 410-691 (1899)
31 COG2706 3-carboxymuconate cycl 99.2 1.2E-07 2.6E-12 74.9 25.7 225 1-227 41-300 (346)
32 PF03022 MRJP: Major royal jel 99.2 9.8E-08 2.1E-12 76.0 24.9 188 2-195 3-257 (287)
33 TIGR02658 TTQ_MADH_Hv methylam 99.1 9.7E-08 2.1E-12 77.6 24.3 198 2-210 107-338 (352)
34 PRK04792 tolB translocation pr 99.1 8.1E-08 1.8E-12 81.4 24.9 204 4-212 222-434 (448)
35 PF06977 SdiA-regulated: SdiA- 99.1 3.1E-07 6.8E-12 71.2 23.4 184 43-229 21-233 (248)
36 COG3204 Uncharacterized protei 99.1 2.6E-07 5.7E-12 71.6 21.6 197 3-203 89-312 (316)
37 PF07995 GSDH: Glucose / Sorbo 99.0 2E-08 4.4E-13 81.7 16.4 156 43-201 1-212 (331)
38 PRK05137 tolB translocation pr 99.0 9.8E-07 2.1E-11 74.7 26.1 204 3-211 205-420 (435)
39 PRK04922 tolB translocation pr 99.0 6.6E-07 1.4E-11 75.7 24.3 203 4-211 208-419 (433)
40 PRK02889 tolB translocation pr 99.0 1.7E-06 3.7E-11 73.1 26.0 204 4-212 200-412 (427)
41 PRK00178 tolB translocation pr 99.0 1.5E-06 3.4E-11 73.4 25.7 204 3-211 202-414 (430)
42 PRK04043 tolB translocation pr 99.0 2.3E-06 5E-11 71.9 25.9 203 3-212 191-409 (419)
43 PRK03629 tolB translocation pr 98.9 3.1E-06 6.8E-11 71.5 26.6 204 3-211 202-414 (429)
44 PF03088 Str_synth: Strictosid 98.9 9.3E-09 2E-13 66.4 8.4 73 90-164 1-88 (89)
45 PF00058 Ldl_recept_b: Low-den 98.9 6.6E-09 1.4E-13 57.5 6.5 41 56-96 1-42 (42)
46 TIGR03606 non_repeat_PQQ dehyd 98.9 7.4E-07 1.6E-11 74.7 21.5 164 37-202 23-261 (454)
47 PF00058 Ldl_recept_b: Low-den 98.9 5.7E-09 1.2E-13 57.8 6.2 42 99-142 1-42 (42)
48 PF03022 MRJP: Major royal jel 98.9 1.3E-06 2.8E-11 69.6 22.1 180 45-227 2-243 (287)
49 TIGR02800 propeller_TolB tol-p 98.9 2.7E-06 5.8E-11 71.6 24.7 204 4-212 194-406 (417)
50 TIGR02658 TTQ_MADH_Hv methylam 98.9 6.7E-06 1.5E-10 67.0 25.4 213 2-231 49-312 (352)
51 PF03088 Str_synth: Strictosid 98.8 3E-08 6.5E-13 64.0 8.0 69 136-204 1-88 (89)
52 PF02239 Cytochrom_D1: Cytochr 98.8 9.3E-06 2E-10 67.1 24.7 190 11-205 5-204 (369)
53 PRK01029 tolB translocation pr 98.8 2.8E-05 6E-10 65.7 27.1 204 5-211 190-411 (428)
54 PRK05137 tolB translocation pr 98.8 1.1E-05 2.4E-10 68.3 24.8 195 11-209 166-372 (435)
55 PRK04792 tolB translocation pr 98.8 1.1E-05 2.3E-10 68.6 24.2 196 11-210 183-389 (448)
56 PRK02889 tolB translocation pr 98.8 1.3E-05 2.8E-10 67.7 24.1 194 11-208 164-365 (427)
57 PRK04043 tolB translocation pr 98.8 1.5E-05 3.2E-10 67.1 24.2 196 11-211 155-365 (419)
58 PRK03629 tolB translocation pr 98.7 5E-05 1.1E-09 64.2 25.4 196 11-210 164-370 (429)
59 PRK04922 tolB translocation pr 98.7 2.6E-05 5.6E-10 66.1 23.6 183 24-210 185-375 (433)
60 TIGR02800 propeller_TolB tol-p 98.7 4.8E-05 1E-09 64.0 24.5 193 12-208 157-359 (417)
61 TIGR03606 non_repeat_PQQ dehyd 98.7 1.3E-05 2.8E-10 67.3 20.4 148 1-154 31-250 (454)
62 PRK01742 tolB translocation pr 98.6 5.6E-05 1.2E-09 64.0 24.3 199 3-211 207-412 (429)
63 TIGR03118 PEPCTERM_chp_1 conse 98.6 1.2E-05 2.7E-10 62.9 18.4 188 37-230 16-256 (336)
64 smart00135 LY Low-density lipo 98.6 1.7E-07 3.8E-12 52.1 6.0 35 132-166 8-42 (43)
65 TIGR03118 PEPCTERM_chp_1 conse 98.6 4.4E-05 9.6E-10 59.9 20.9 201 1-211 24-288 (336)
66 PRK00178 tolB translocation pr 98.6 7.4E-05 1.6E-09 63.2 24.6 196 11-210 163-370 (430)
67 PF02239 Cytochrom_D1: Cytochr 98.6 4.2E-05 9.2E-10 63.3 22.0 163 4-172 41-211 (369)
68 smart00135 LY Low-density lipo 98.5 5E-07 1.1E-11 50.2 6.5 41 37-77 2-42 (43)
69 TIGR03032 conserved hypothetic 98.5 0.00021 4.5E-09 56.6 22.7 180 44-231 103-319 (335)
70 PRK01742 tolB translocation pr 98.4 0.0004 8.7E-09 58.8 22.9 185 12-205 170-363 (429)
71 PF02333 Phytase: Phytase; In 98.4 0.00022 4.9E-09 58.4 20.3 189 11-206 68-293 (381)
72 cd00200 WD40 WD40 domain, foun 98.4 0.00056 1.2E-08 53.0 28.0 214 4-228 56-272 (289)
73 COG2133 Glucose/sorbosone dehy 98.3 0.00023 4.9E-09 58.7 19.6 139 87-229 177-378 (399)
74 cd00200 WD40 WD40 domain, foun 98.3 0.00075 1.6E-08 52.3 24.2 188 3-198 97-286 (289)
75 KOG0279|consensus 98.3 0.00085 1.9E-08 51.9 20.9 204 5-214 69-274 (315)
76 PRK02888 nitrous-oxide reducta 98.3 0.00031 6.6E-09 60.9 19.8 191 11-203 141-404 (635)
77 PF05096 Glu_cyclase_2: Glutam 98.2 0.0014 3.1E-08 51.0 25.1 188 3-201 48-259 (264)
78 PRK01029 tolB translocation pr 98.2 0.0019 4.1E-08 54.7 23.1 166 4-172 235-412 (428)
79 TIGR03032 conserved hypothetic 98.2 0.00022 4.7E-09 56.5 16.0 55 168-226 196-251 (335)
80 PF06433 Me-amine-dh_H: Methyl 98.2 0.0018 3.9E-08 52.2 21.2 200 5-211 100-329 (342)
81 COG2133 Glucose/sorbosone dehy 98.2 0.00066 1.4E-08 56.1 19.0 160 44-204 177-398 (399)
82 COG3204 Uncharacterized protei 98.0 0.0022 4.8E-08 50.3 18.1 182 44-229 86-295 (316)
83 PF01436 NHL: NHL repeat; Int 98.0 2.6E-05 5.5E-10 39.0 4.4 28 132-160 1-28 (28)
84 KOG4499|consensus 97.8 0.0022 4.7E-08 48.8 14.7 107 41-151 155-273 (310)
85 PF01436 NHL: NHL repeat; Int 97.8 0.00011 2.4E-09 36.6 4.6 28 43-71 1-28 (28)
86 PRK02888 nitrous-oxide reducta 97.7 0.0028 6E-08 55.2 15.6 148 55-204 141-352 (635)
87 KOG0291|consensus 97.6 0.041 8.8E-07 48.5 21.8 199 3-210 396-620 (893)
88 COG5276 Uncharacterized conser 97.6 0.021 4.7E-07 45.0 25.0 175 9-195 94-278 (370)
89 KOG0291|consensus 97.5 0.054 1.2E-06 47.8 23.8 163 43-211 350-518 (893)
90 COG0823 TolB Periplasmic compo 97.5 0.053 1.1E-06 45.9 19.5 153 7-163 200-358 (425)
91 PF14583 Pectate_lyase22: Olig 97.4 0.021 4.5E-07 47.1 15.6 159 12-173 49-234 (386)
92 PF05096 Glu_cyclase_2: Glutam 97.4 0.043 9.3E-07 42.9 22.0 154 45-208 46-208 (264)
93 PF05787 DUF839: Bacterial pro 97.4 0.015 3.2E-07 50.5 15.3 65 41-106 347-454 (524)
94 PF05787 DUF839: Bacterial pro 97.3 0.03 6.4E-07 48.6 16.4 138 8-153 255-455 (524)
95 COG0823 TolB Periplasmic compo 97.2 0.1 2.2E-06 44.2 19.1 145 24-172 174-323 (425)
96 KOG1446|consensus 97.2 0.08 1.7E-06 41.9 25.2 209 2-220 17-235 (311)
97 PF14583 Pectate_lyase22: Olig 97.2 0.027 5.8E-07 46.4 14.0 153 55-211 48-232 (386)
98 KOG0289|consensus 97.1 0.12 2.6E-06 42.9 20.2 190 3-199 307-501 (506)
99 PTZ00421 coronin; Provisional 97.1 0.17 3.8E-06 43.7 27.7 198 3-204 79-291 (493)
100 COG4946 Uncharacterized protei 97.1 0.065 1.4E-06 44.9 15.2 134 14-152 374-508 (668)
101 KOG0315|consensus 97.0 0.11 2.3E-06 40.1 22.5 176 24-205 62-247 (311)
102 PF01731 Arylesterase: Arylest 96.9 0.004 8.7E-08 40.0 5.5 39 122-162 45-83 (86)
103 KOG0285|consensus 96.8 0.13 2.9E-06 41.6 14.6 119 41-165 149-267 (460)
104 PLN00181 protein SPA1-RELATED; 96.8 0.41 9E-06 44.0 29.7 195 3-203 487-690 (793)
105 PF13449 Phytase-like: Esteras 96.8 0.21 4.6E-06 40.7 19.8 160 3-164 23-252 (326)
106 PF13449 Phytase-like: Esteras 96.8 0.23 5E-06 40.6 16.5 117 2-121 87-253 (326)
107 KOG0285|consensus 96.7 0.27 5.7E-06 40.0 18.6 99 3-104 155-253 (460)
108 KOG4378|consensus 96.6 0.25 5.5E-06 41.8 15.2 189 12-205 90-282 (673)
109 KOG0272|consensus 96.6 0.26 5.7E-06 40.7 14.9 136 43-183 303-439 (459)
110 KOG4378|consensus 96.5 0.41 8.8E-06 40.6 16.2 159 2-167 124-284 (673)
111 COG5276 Uncharacterized conser 96.5 0.31 6.8E-06 38.7 21.8 184 8-202 135-328 (370)
112 PF13360 PQQ_2: PQQ-like domai 96.4 0.3 6.5E-06 37.4 24.4 179 11-206 36-233 (238)
113 KOG0310|consensus 96.3 0.56 1.2E-05 39.4 21.9 217 3-230 72-292 (487)
114 TIGR02276 beta_rpt_yvtn 40-res 96.3 0.033 7.1E-07 30.2 6.1 41 142-182 1-41 (42)
115 KOG1446|consensus 96.2 0.44 9.6E-06 37.8 22.2 174 24-203 81-262 (311)
116 PF02333 Phytase: Phytase; In 96.2 0.6 1.3E-05 38.8 17.2 122 41-165 153-292 (381)
117 PLN00181 protein SPA1-RELATED; 96.1 1.1 2.4E-05 41.3 26.7 194 4-203 537-738 (793)
118 PTZ00421 coronin; Provisional 96.1 0.87 1.9E-05 39.5 25.5 196 3-202 129-329 (493)
119 KOG0318|consensus 96.0 0.86 1.9E-05 38.9 23.4 178 37-225 314-495 (603)
120 PF01731 Arylesterase: Arylest 95.9 0.028 6.1E-07 36.1 5.2 38 37-74 47-84 (86)
121 PF00930 DPPIV_N: Dipeptidyl p 95.9 0.72 1.6E-05 38.1 14.8 116 67-183 211-336 (353)
122 KOG0266|consensus 95.9 1 2.2E-05 38.6 23.9 192 3-203 207-409 (456)
123 PRK11138 outer membrane biogen 95.8 1 2.2E-05 37.8 22.9 135 55-202 256-393 (394)
124 TIGR02276 beta_rpt_yvtn 40-res 95.7 0.077 1.7E-06 28.6 6.0 41 54-95 2-42 (42)
125 KOG0315|consensus 95.7 0.7 1.5E-05 35.8 21.0 192 2-202 86-287 (311)
126 COG3823 Glutamine cyclotransfe 95.7 0.66 1.4E-05 35.1 14.9 174 4-191 50-247 (262)
127 KOG4649|consensus 95.7 0.78 1.7E-05 35.9 17.1 105 49-170 66-172 (354)
128 KOG4441|consensus 95.6 1.5 3.2E-05 38.9 20.5 209 11-225 332-567 (571)
129 PF06433 Me-amine-dh_H: Methyl 95.5 1.1 2.3E-05 36.6 17.5 148 15-167 150-324 (342)
130 COG4946 Uncharacterized protei 95.5 1.4 3E-05 37.5 18.6 131 57-192 373-508 (668)
131 PF05694 SBP56: 56kDa selenium 95.4 1.1 2.3E-05 37.8 13.9 63 88-152 313-393 (461)
132 KOG0279|consensus 95.4 0.98 2.1E-05 35.5 20.2 153 4-165 110-264 (315)
133 KOG0266|consensus 95.4 1.5 3.3E-05 37.6 25.5 192 4-203 164-364 (456)
134 KOG4328|consensus 95.4 1.1 2.3E-05 37.7 13.6 197 4-206 239-453 (498)
135 KOG0318|consensus 95.3 1.6 3.5E-05 37.4 24.8 215 2-229 193-417 (603)
136 KOG4441|consensus 95.1 2.3 4.9E-05 37.7 17.7 172 47-227 326-522 (571)
137 PF02897 Peptidase_S9_N: Proly 95.1 1.8 3.9E-05 36.5 23.9 203 5-211 175-412 (414)
138 KOG0292|consensus 95.0 0.67 1.4E-05 42.2 12.2 154 3-165 13-167 (1202)
139 KOG0310|consensus 95.0 1.9 4.1E-05 36.5 22.1 183 4-195 115-301 (487)
140 PF08662 eIF2A: Eukaryotic tra 95.0 1.1 2.4E-05 33.6 20.5 123 24-152 40-163 (194)
141 KOG0281|consensus 95.0 0.29 6.3E-06 39.6 9.0 144 44-203 238-388 (499)
142 PF02897 Peptidase_S9_N: Proly 94.9 2 4.4E-05 36.1 24.0 205 4-214 128-369 (414)
143 KOG1539|consensus 94.9 2.9 6.3E-05 37.9 18.1 155 2-165 451-608 (910)
144 PTZ00420 coronin; Provisional 94.8 2.6 5.7E-05 37.2 28.7 219 3-229 78-318 (568)
145 KOG0268|consensus 94.8 0.78 1.7E-05 37.4 10.9 133 46-185 190-326 (433)
146 PTZ00420 coronin; Provisional 94.7 2.8 6E-05 37.1 24.8 193 3-203 129-333 (568)
147 PF00930 DPPIV_N: Dipeptidyl p 94.6 2.2 4.8E-05 35.2 14.4 142 4-148 188-343 (353)
148 PRK13616 lipoprotein LpqB; Pro 94.5 3.3 7.2E-05 36.8 20.6 178 4-194 354-560 (591)
149 PF02191 OLF: Olfactomedin-lik 94.4 1.9 4.1E-05 33.8 16.7 139 11-154 78-240 (250)
150 KOG0293|consensus 94.2 2.8 6.1E-05 34.9 13.7 151 4-163 274-425 (519)
151 KOG0289|consensus 94.2 2.9 6.3E-05 35.0 20.6 163 44-212 304-471 (506)
152 KOG0263|consensus 94.1 4.1 9E-05 36.4 15.1 150 5-163 499-649 (707)
153 KOG0268|consensus 93.9 3 6.5E-05 34.2 14.5 205 3-224 113-322 (433)
154 smart00284 OLF Olfactomedin-li 93.8 2.6 5.7E-05 33.0 15.5 140 11-153 83-244 (255)
155 KOG0292|consensus 93.7 5.6 0.00012 36.7 20.2 161 6-190 213-383 (1202)
156 KOG2055|consensus 93.6 3.9 8.4E-05 34.6 20.1 189 3-201 217-415 (514)
157 COG3823 Glutamine cyclotransfe 93.4 2.6 5.7E-05 32.0 12.4 114 44-163 131-259 (262)
158 KOG1274|consensus 93.4 6.2 0.00013 36.2 16.9 152 4-165 18-170 (933)
159 KOG0263|consensus 93.2 6.1 0.00013 35.4 19.1 189 3-202 455-648 (707)
160 PRK13616 lipoprotein LpqB; Pro 93.1 6 0.00013 35.2 21.1 156 44-209 350-533 (591)
161 KOG0286|consensus 93.1 3.7 8.1E-05 32.7 20.3 155 24-182 167-323 (343)
162 KOG4328|consensus 93.1 4.8 0.0001 34.0 15.4 194 3-202 190-398 (498)
163 PRK11138 outer membrane biogen 93.0 4.8 0.0001 33.7 18.3 135 11-162 256-393 (394)
164 COG3211 PhoX Predicted phospha 93.0 2.1 4.6E-05 37.2 10.9 106 84-190 414-571 (616)
165 KOG1539|consensus 92.6 7.1 0.00015 35.5 13.8 142 2-153 496-638 (910)
166 KOG0294|consensus 92.6 4.7 0.0001 32.5 19.8 201 14-227 54-259 (362)
167 KOG2048|consensus 92.5 7.1 0.00015 34.6 16.0 154 4-163 433-601 (691)
168 KOG0272|consensus 92.5 5.6 0.00012 33.2 17.4 192 2-201 177-373 (459)
169 TIGR03300 assembly_YfgL outer 92.5 5.4 0.00012 33.1 21.9 134 55-200 241-376 (377)
170 KOG3621|consensus 92.4 1.9 4.2E-05 38.2 10.1 170 46-230 45-224 (726)
171 KOG0277|consensus 92.3 4.5 9.7E-05 31.6 13.8 119 45-166 106-224 (311)
172 PF13360 PQQ_2: PQQ-like domai 92.2 4.1 8.8E-05 31.1 20.0 142 11-167 76-234 (238)
173 KOG0303|consensus 92.2 5.9 0.00013 32.9 14.1 155 5-166 137-297 (472)
174 KOG0308|consensus 92.1 8.2 0.00018 34.2 17.2 153 4-165 122-287 (735)
175 KOG0264|consensus 92.1 6.4 0.00014 33.0 15.1 158 3-163 181-347 (422)
176 KOG0639|consensus 91.7 8 0.00017 33.3 12.9 178 4-195 514-696 (705)
177 KOG0308|consensus 91.5 9.6 0.00021 33.8 14.0 151 4-162 176-326 (735)
178 COG3211 PhoX Predicted phospha 91.5 6.7 0.00015 34.3 12.1 112 42-154 415-575 (616)
179 KOG0276|consensus 91.4 9.7 0.00021 33.7 20.3 195 3-204 17-216 (794)
180 KOG0273|consensus 91.2 8.5 0.00018 32.7 22.0 73 44-117 317-389 (524)
181 COG4247 Phy 3-phytase (myo-ino 91.2 6.1 0.00013 31.0 19.0 101 61-163 119-234 (364)
182 KOG0282|consensus 91.1 7.1 0.00015 33.2 11.7 192 4-203 219-415 (503)
183 KOG3914|consensus 91.0 7.9 0.00017 32.0 13.2 163 45-211 64-232 (390)
184 PHA02713 hypothetical protein; 91.0 11 0.00023 33.4 20.9 191 11-211 303-541 (557)
185 KOG0286|consensus 90.5 7.7 0.00017 31.0 24.0 138 60-202 160-302 (343)
186 KOG0282|consensus 90.4 5.3 0.00011 33.9 10.4 153 45-203 216-372 (503)
187 KOG0319|consensus 90.2 14 0.00029 33.3 14.8 197 4-206 67-271 (775)
188 PF10647 Gmad1: Lipoprotein Lp 90.2 7.7 0.00017 30.4 21.7 201 3-211 27-244 (253)
189 KOG0281|consensus 90.0 6.8 0.00015 32.1 10.3 177 12-203 247-428 (499)
190 KOG0646|consensus 89.8 11 0.00025 31.8 19.6 191 4-203 86-307 (476)
191 KOG1517|consensus 89.4 20 0.00043 34.0 14.1 165 46-213 1166-1343(1387)
192 PF05694 SBP56: 56kDa selenium 88.8 2.6 5.7E-05 35.6 7.5 62 2-64 314-394 (461)
193 KOG0319|consensus 88.5 18 0.0004 32.5 14.0 171 49-228 25-203 (775)
194 COG4247 Phy 3-phytase (myo-ino 88.3 11 0.00023 29.7 19.0 76 41-119 150-234 (364)
195 KOG0306|consensus 88.2 20 0.00043 32.6 14.9 151 3-163 512-664 (888)
196 smart00284 OLF Olfactomedin-li 88.2 11 0.00024 29.6 20.1 148 44-199 74-248 (255)
197 KOG0270|consensus 87.8 15 0.00034 30.9 18.1 152 4-170 248-411 (463)
198 KOG0645|consensus 87.7 12 0.00026 29.6 18.8 152 3-159 65-223 (312)
199 KOG0641|consensus 87.6 11 0.00024 29.0 11.6 74 44-121 232-305 (350)
200 KOG1407|consensus 87.1 13 0.00028 29.3 18.4 133 45-184 149-282 (313)
201 PF07433 DUF1513: Protein of u 87.0 15 0.00032 29.8 22.0 218 3-228 8-268 (305)
202 KOG0639|consensus 87.0 19 0.00042 31.1 12.8 153 4-165 424-583 (705)
203 PF07433 DUF1513: Protein of u 86.8 15 0.00033 29.7 22.9 199 6-208 57-290 (305)
204 PHA02713 hypothetical protein; 86.3 23 0.00051 31.4 21.1 191 24-226 273-511 (557)
205 TIGR03300 assembly_YfgL outer 86.0 18 0.0004 29.9 22.2 105 98-212 241-348 (377)
206 KOG0284|consensus 85.3 21 0.00046 29.9 12.9 155 3-164 184-338 (464)
207 KOG1407|consensus 85.1 17 0.00037 28.7 17.7 156 3-167 24-181 (313)
208 KOG2111|consensus 84.9 19 0.00042 29.1 21.2 154 44-203 95-256 (346)
209 KOG0640|consensus 84.2 21 0.00045 29.0 15.5 112 43-161 172-289 (430)
210 KOG0275|consensus 84.0 21 0.00046 29.0 14.3 131 47-182 352-487 (508)
211 PRK10115 protease 2; Provision 83.3 36 0.00079 31.1 26.6 199 4-208 131-351 (686)
212 KOG0307|consensus 83.3 33 0.00071 32.5 12.1 161 2-166 119-287 (1049)
213 KOG2110|consensus 83.2 25 0.00054 29.1 16.4 146 11-162 97-247 (391)
214 KOG0973|consensus 83.0 42 0.0009 31.6 14.7 148 42-193 128-283 (942)
215 KOG0649|consensus 82.7 21 0.00046 27.9 19.6 77 42-122 113-189 (325)
216 KOG0772|consensus 81.8 34 0.00074 29.7 15.4 158 2-163 170-347 (641)
217 PF02191 OLF: Olfactomedin-lik 81.8 23 0.0005 27.8 21.6 178 9-192 28-238 (250)
218 KOG2139|consensus 81.5 29 0.00063 28.8 14.4 189 4-198 155-371 (445)
219 COG1770 PtrB Protease II [Amin 80.6 43 0.00094 30.1 24.2 205 4-212 133-357 (682)
220 KOG0918|consensus 80.3 31 0.00067 29.0 9.8 102 47-164 315-435 (476)
221 TIGR03075 PQQ_enz_alc_DH PQQ-d 79.5 43 0.00094 29.5 23.6 67 137-203 238-333 (527)
222 KOG0650|consensus 78.4 29 0.00062 30.8 9.5 92 66-164 546-638 (733)
223 KOG0273|consensus 78.4 43 0.00092 28.7 19.4 67 4-72 321-387 (524)
224 PF06739 SBBP: Beta-propeller 78.1 2.5 5.5E-05 22.4 2.2 20 87-107 13-32 (38)
225 KOG0293|consensus 78.1 41 0.00089 28.4 17.3 115 44-164 270-385 (519)
226 KOG0284|consensus 78.0 41 0.00088 28.3 12.4 123 37-165 132-254 (464)
227 KOG3881|consensus 76.7 43 0.00093 27.9 10.3 109 45-160 204-316 (412)
228 TIGR03075 PQQ_enz_alc_DH PQQ-d 76.0 55 0.0012 28.8 19.9 84 136-221 390-509 (527)
229 KOG0269|consensus 75.4 66 0.0014 29.5 14.0 138 2-144 136-275 (839)
230 KOG0275|consensus 74.7 45 0.00098 27.2 12.2 93 47-143 396-490 (508)
231 KOG0649|consensus 74.5 40 0.00086 26.5 17.3 150 4-165 119-276 (325)
232 KOG1538|consensus 73.7 71 0.0015 29.0 10.7 57 175-231 133-190 (1081)
233 KOG0299|consensus 72.5 61 0.0013 27.7 15.6 120 37-159 321-452 (479)
234 KOG0306|consensus 72.3 80 0.0017 29.0 20.9 197 24-229 435-646 (888)
235 KOG0269|consensus 71.9 82 0.0018 28.9 13.4 108 56-166 100-210 (839)
236 KOG1445|consensus 71.8 34 0.00074 30.6 8.4 192 4-208 632-849 (1012)
237 cd00216 PQQ_DH Dehydrogenases 71.2 70 0.0015 27.8 23.0 34 137-170 221-271 (488)
238 KOG0270|consensus 71.2 64 0.0014 27.4 17.0 59 48-106 248-306 (463)
239 KOG1409|consensus 70.9 45 0.00098 27.5 8.4 111 4-120 160-271 (404)
240 KOG0772|consensus 70.9 72 0.0016 27.9 15.8 160 39-202 163-346 (641)
241 PF10647 Gmad1: Lipoprotein Lp 70.8 49 0.0011 25.9 17.9 162 45-210 25-204 (253)
242 TIGR02171 Fb_sc_TIGR02171 Fibr 69.2 72 0.0016 30.0 10.2 97 55-155 319-423 (912)
243 PF08662 eIF2A: Eukaryotic tra 69.0 46 0.00099 24.9 18.3 135 67-208 40-184 (194)
244 KOG0918|consensus 69.0 34 0.00074 28.8 7.5 31 90-122 315-345 (476)
245 KOG1274|consensus 68.0 1.1E+02 0.0023 28.7 20.6 148 14-167 68-222 (933)
246 PHA02790 Kelch-like protein; P 67.6 83 0.0018 27.3 17.3 162 55-228 271-447 (480)
247 KOG1273|consensus 66.4 71 0.0015 26.1 19.4 190 4-201 28-224 (405)
248 PF14339 DUF4394: Domain of un 66.0 61 0.0013 25.2 9.4 119 86-208 26-169 (236)
249 KOG4227|consensus 65.2 83 0.0018 26.5 13.9 110 43-157 105-219 (609)
250 COG1520 FOG: WD40-like repeat 63.6 85 0.0018 26.0 12.3 108 98-212 68-181 (370)
251 KOG0264|consensus 63.5 92 0.002 26.4 14.9 115 3-120 231-348 (422)
252 PF04841 Vps16_N: Vps16, N-ter 63.0 95 0.0021 26.4 19.8 92 134-228 218-313 (410)
253 KOG2919|consensus 61.4 91 0.002 25.6 11.7 120 42-164 157-282 (406)
254 KOG0276|consensus 61.0 1.3E+02 0.0028 27.2 19.7 136 24-163 78-215 (794)
255 PF05935 Arylsulfotrans: Aryls 60.4 1.2E+02 0.0025 26.5 15.8 156 10-171 112-309 (477)
256 KOG0645|consensus 59.0 92 0.002 24.9 22.5 182 43-227 14-205 (312)
257 KOG0305|consensus 59.0 1.2E+02 0.0027 26.4 15.4 144 3-151 305-450 (484)
258 PF13570 PQQ_3: PQQ-like domai 58.7 22 0.00047 18.6 3.4 24 179-203 16-39 (40)
259 KOG0278|consensus 58.6 90 0.002 24.7 17.1 144 5-162 149-298 (334)
260 PF08309 LVIVD: LVIVD repeat; 57.6 30 0.00064 18.8 4.7 27 176-203 3-29 (42)
261 KOG1036|consensus 57.4 1E+02 0.0022 25.0 15.2 148 44-201 14-161 (323)
262 KOG3621|consensus 56.1 1.6E+02 0.0035 26.8 13.7 186 2-201 127-351 (726)
263 KOG2919|consensus 55.9 1.1E+02 0.0025 25.1 14.8 157 2-164 161-328 (406)
264 KOG2139|consensus 55.0 1.3E+02 0.0027 25.2 21.0 197 3-203 199-431 (445)
265 KOG4649|consensus 52.9 1.2E+02 0.0025 24.3 14.5 132 46-205 33-167 (354)
266 KOG3914|consensus 52.6 1.4E+02 0.003 25.1 14.2 151 6-165 69-225 (390)
267 KOG0296|consensus 51.8 1.4E+02 0.0031 24.9 24.7 112 3-121 110-222 (399)
268 PF01011 PQQ: PQQ enzyme repea 51.4 35 0.00075 17.7 3.8 26 185-211 1-27 (38)
269 KOG1272|consensus 49.8 75 0.0016 27.4 6.5 33 133-166 294-326 (545)
270 KOG2048|consensus 49.2 2.1E+02 0.0044 26.0 24.0 99 2-104 28-128 (691)
271 PF15390 DUF4613: Domain of un 49.0 2E+02 0.0044 25.8 9.2 67 37-104 332-401 (671)
272 KOG1036|consensus 48.8 1.5E+02 0.0031 24.2 18.3 197 3-214 17-235 (323)
273 KOG0283|consensus 48.8 2.2E+02 0.0047 26.2 16.5 148 49-203 373-532 (712)
274 KOG0301|consensus 48.3 2.2E+02 0.0047 26.0 16.5 120 85-214 139-259 (745)
275 KOG0278|consensus 48.1 1.4E+02 0.003 23.7 15.6 125 63-195 162-289 (334)
276 PF14517 Tachylectin: Tachylec 46.8 1.4E+02 0.003 23.2 10.8 107 4-119 85-206 (229)
277 KOG1645|consensus 46.6 1.1E+02 0.0023 26.0 6.8 70 4-76 198-268 (463)
278 PHA02790 Kelch-like protein; P 46.6 2E+02 0.0043 25.0 21.8 184 11-207 271-474 (480)
279 PRK10115 protease 2; Provision 46.4 2.4E+02 0.0052 25.9 24.7 160 4-169 176-352 (686)
280 KOG0290|consensus 46.3 1.6E+02 0.0035 23.9 16.5 81 4-85 155-238 (364)
281 KOG1034|consensus 46.3 1.7E+02 0.0037 24.2 10.5 112 5-119 97-211 (385)
282 TIGR02171 Fb_sc_TIGR02171 Fibr 46.3 2.7E+02 0.0058 26.5 10.0 94 98-196 319-424 (912)
283 KOG0322|consensus 46.2 1.1E+02 0.0024 24.4 6.5 58 43-101 251-308 (323)
284 KOG2106|consensus 46.1 2.1E+02 0.0045 25.2 19.9 119 86-214 329-457 (626)
285 PF05345 He_PIG: Putative Ig d 45.2 29 0.00063 19.5 2.5 23 132-154 10-32 (49)
286 KOG0641|consensus 44.6 1.5E+02 0.0032 23.1 21.9 114 92-208 187-308 (350)
287 PF08553 VID27: VID27 cytoplas 43.2 2.9E+02 0.0062 26.0 13.7 144 1-150 482-636 (794)
288 KOG3567|consensus 42.9 59 0.0013 27.9 4.9 52 154-205 444-498 (501)
289 KOG2106|consensus 42.7 2.4E+02 0.0051 24.8 19.0 131 25-168 351-484 (626)
290 KOG1445|consensus 42.7 2.7E+02 0.0058 25.4 12.4 138 24-166 701-847 (1012)
291 PF08954 DUF1900: Domain of un 42.1 82 0.0018 22.2 4.9 53 45-97 12-67 (136)
292 KOG0265|consensus 41.6 1.9E+02 0.0042 23.5 16.9 112 4-120 52-164 (338)
293 KOG3567|consensus 41.5 68 0.0015 27.6 5.1 34 131-165 465-498 (501)
294 KOG0288|consensus 41.2 2.3E+02 0.0049 24.2 14.2 134 12-151 312-450 (459)
295 KOG4283|consensus 40.8 2E+02 0.0043 23.4 18.2 154 4-163 48-219 (397)
296 KOG0316|consensus 40.7 1.8E+02 0.0039 22.9 18.5 157 44-208 60-219 (307)
297 KOG4227|consensus 39.0 2.4E+02 0.0052 23.9 12.9 103 2-107 108-215 (609)
298 KOG2321|consensus 38.8 2.9E+02 0.0063 24.8 18.7 148 5-166 57-208 (703)
299 KOG2321|consensus 38.3 3E+02 0.0064 24.7 17.4 74 4-80 138-211 (703)
300 KOG0303|consensus 37.6 2.6E+02 0.0056 23.8 18.3 210 4-220 86-311 (472)
301 COG1520 FOG: WD40-like repeat 37.4 2.4E+02 0.0052 23.3 15.5 139 11-163 68-217 (370)
302 KOG1645|consensus 36.6 2.5E+02 0.0054 23.9 7.4 74 85-163 192-266 (463)
303 KOG0321|consensus 36.0 2.8E+02 0.0062 25.1 8.0 103 10-117 63-173 (720)
304 PF09910 DUF2139: Uncharacteri 35.6 2.5E+02 0.0053 23.0 13.2 37 135-171 108-147 (339)
305 KOG0271|consensus 34.1 2.9E+02 0.0063 23.4 14.9 162 45-210 117-284 (480)
306 KOG0640|consensus 34.0 2.7E+02 0.0058 22.9 14.0 106 4-116 177-288 (430)
307 KOG0288|consensus 33.3 3.1E+02 0.0067 23.4 17.1 114 87-208 303-422 (459)
308 PF03178 CPSF_A: CPSF A subuni 33.2 2.6E+02 0.0056 22.5 15.2 127 66-201 62-200 (321)
309 PF08470 NTNH_C: Nontoxic nonh 31.8 1.6E+02 0.0034 21.0 4.8 59 99-159 89-147 (165)
310 PF09910 DUF2139: Uncharacteri 31.7 2.9E+02 0.0062 22.6 19.2 96 66-167 78-185 (339)
311 PF13970 DUF4221: Domain of un 31.3 2.8E+02 0.0061 22.6 7.3 81 133-214 42-134 (333)
312 KOG0646|consensus 30.2 3.6E+02 0.0079 23.3 18.5 113 45-163 176-307 (476)
313 KOG1310|consensus 29.6 4.1E+02 0.009 23.8 9.1 112 4-119 55-178 (758)
314 KOG0301|consensus 28.4 4.7E+02 0.01 24.0 16.2 166 49-228 64-230 (745)
315 PF14870 PSII_BNR: Photosynthe 27.7 3.4E+02 0.0073 22.1 23.3 211 4-228 66-286 (302)
316 KOG0296|consensus 27.7 3.7E+02 0.008 22.6 23.9 192 3-202 68-272 (399)
317 KOG0299|consensus 27.5 4.1E+02 0.0088 23.0 18.7 188 2-203 145-356 (479)
318 PF00780 CNH: CNH domain; Int 26.9 3E+02 0.0066 21.3 18.3 147 52-210 4-172 (275)
319 KOG0643|consensus 26.3 3.5E+02 0.0075 21.8 22.6 192 5-203 16-220 (327)
320 KOG1408|consensus 26.2 5.4E+02 0.012 24.0 11.0 110 47-162 600-712 (1080)
321 PF03664 Glyco_hydro_62: Glyco 24.9 3.5E+02 0.0076 21.4 8.9 28 88-118 132-161 (271)
322 KOG1517|consensus 24.9 6.8E+02 0.015 24.7 14.7 168 9-183 1175-1360(1387)
323 KOG0973|consensus 24.8 6.3E+02 0.014 24.3 17.3 110 44-159 70-197 (942)
324 PF14517 Tachylectin: Tachylec 24.4 3.4E+02 0.0074 21.1 16.1 147 5-163 39-206 (229)
325 PF12216 m04gp34like: Immune e 24.1 2.6E+02 0.0056 22.4 5.5 23 132-154 134-156 (272)
326 PF08954 DUF1900: Domain of un 23.9 2.7E+02 0.0058 19.6 5.8 48 6-54 17-67 (136)
327 KOG1897|consensus 23.7 6.8E+02 0.015 24.3 13.8 130 65-203 806-942 (1096)
328 PRK13684 Ycf48-like protein; P 23.2 4.2E+02 0.0091 21.7 22.9 164 56-228 143-313 (334)
329 KOG1538|consensus 23.1 6.1E+02 0.013 23.5 14.9 137 61-203 149-293 (1081)
330 PF14759 Reductase_C: Reductas 23.1 2E+02 0.0044 18.0 5.2 28 14-42 1-28 (85)
331 PF08268 FBA_3: F-box associat 22.1 2.6E+02 0.0057 18.9 7.2 53 137-192 1-62 (129)
332 KOG1273|consensus 21.8 4.7E+02 0.01 21.7 16.1 151 4-162 70-225 (405)
333 PF14269 Arylsulfotran_2: Aryl 21.6 4.4E+02 0.0095 21.3 12.2 122 88-212 145-298 (299)
334 KOG0271|consensus 21.1 5.2E+02 0.011 22.0 17.7 73 133-206 368-442 (480)
335 COG4880 Secreted protein conta 21.0 5.6E+02 0.012 22.3 16.4 35 157-191 232-267 (603)
336 COG1770 PtrB Protease II [Amin 20.8 6.6E+02 0.014 23.1 22.3 117 44-163 129-256 (682)
337 KOG0307|consensus 20.4 8.1E+02 0.018 23.9 8.8 157 4-167 166-331 (1049)
338 COG4222 Uncharacterized protei 20.1 5.5E+02 0.012 21.9 8.2 41 110-150 165-217 (391)
339 PTZ00486 apyrase Superfamily; 20.1 4.8E+02 0.01 21.8 6.4 57 134-190 111-179 (352)
340 KOG0265|consensus 20.0 4.9E+02 0.011 21.3 14.1 50 112-163 197-246 (338)
No 1
>KOG1214|consensus
Probab=100.00 E-value=1.4e-45 Score=308.93 Aligned_cols=229 Identities=42% Similarity=0.782 Sum_probs=220.7
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
+++||+||..+..+||+|+... .|.+..|+|...++++..++..|+||||||+.+++||+|+.+.+|.+..++|+.+++
T Consensus 1026 IiVGidfDC~e~mvyWtDv~g~-SI~rasL~G~Ep~ti~n~~L~SPEGiAVDh~~Rn~ywtDS~lD~IevA~LdG~~rkv 1104 (1289)
T KOG1214|consen 1026 IIVGIDFDCRERMVYWTDVAGR-SISRASLEGAEPETIVNSGLISPEGIAVDHIRRNMYWTDSVLDKIEVALLDGSERKV 1104 (1289)
T ss_pred eeeeeecccccceEEEeecCCC-ccccccccCCCCceeecccCCCccceeeeeccceeeeeccccchhheeecCCceeeE
Confidence 4789999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
++.+.+-+|++|++|+.+|.|||+||++++++|.+.+|||++.+++++.+ +.-||||+||+..+.|.|+|.++++++++
T Consensus 1105 Lf~tdLVNPR~iv~D~~rgnLYwtDWnRenPkIets~mDG~NrRilin~D-igLPNGLtfdpfs~~LCWvDAGt~rleC~ 1183 (1289)
T KOG1214|consen 1105 LFYTDLVNPRAIVVDPIRGNLYWTDWNRENPKIETSSMDGENRRILINTD-IGLPNGLTFDPFSKLLCWVDAGTKRLECT 1183 (1289)
T ss_pred EEeecccCcceEEeecccCceeeccccccCCcceeeccCCccceEEeecc-cCCCCCceeCcccceeeEEecCCcceeEe
Confidence 99999999999999999999999999999999999999999999999988 99999999999999999999999999999
Q ss_pred ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCCCC
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG 232 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~~~ 232 (232)
.++|..|+++.+.++.|++|+-+++.+|||||+.+.|.++++.+++.+..+.+..++ +-+||+.+.++||+
T Consensus 1184 ~p~g~gRR~i~~~LqYPF~itsy~~~fY~TDWk~n~vvsv~~~~~~~td~~~p~~~s-~lyGItav~~~Cp~ 1254 (1289)
T KOG1214|consen 1184 LPDGTGRRVIQNNLQYPFSITSYADHFYHTDWKRNGVVSVNKHSGQFTDEYLPEQRS-HLYGITAVYPYCPT 1254 (1289)
T ss_pred cCCCCcchhhhhcccCceeeeeccccceeeccccCceEEeecccccccccccccccc-ceEEEEeccccCCC
Confidence 999999999999999999999999899999999999999999999988888777666 48999999999995
No 2
>KOG1214|consensus
Probab=99.96 E-value=1.1e-27 Score=201.97 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=184.9
Q ss_pred CCCEEEEEEcCCCCcEEEEEcCCCceeE-----EEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751 10 VEGQVYYSSVADKSSIKRAHLDGKNVED-----VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK 84 (232)
Q Consensus 10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~-----~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 84 (232)
....|.++... .|....++|....+ ++.-.-.-|.||++|...+++||+|-....|.+..++|...+.+++.
T Consensus 989 ~gt~LL~aqg~---~I~~lplng~~~~K~~ak~~l~~p~~IiVGidfDC~e~mvyWtDv~g~SI~rasL~G~Ep~ti~n~ 1065 (1289)
T KOG1214|consen 989 VGTFLLYAQGQ---QIGYLPLNGTRLQKDAAKTLLSLPGSIIVGIDFDCRERMVYWTDVAGRSISRASLEGAEPETIVNS 1065 (1289)
T ss_pred CcceEEEeccc---eEEEeecCcchhchhhhhceEecccceeeeeecccccceEEEeecCCCccccccccCCCCceeecc
Confidence 34566665543 79999999865433 22223367899999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEec
Q psy5751 85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTI 162 (232)
Q Consensus 85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~ 162 (232)
.+..|.|||||+..+.+||+|+. ..+|.++.|||+.+++++... |-+|.+|.+|+-.+.|||+|++ +.+|.+.+|
T Consensus 1066 ~L~SPEGiAVDh~~Rn~ywtDS~--lD~IevA~LdG~~rkvLf~td-LVNPR~iv~D~~rgnLYwtDWnRenPkIets~m 1142 (1289)
T KOG1214|consen 1066 GLISPEGIAVDHIRRNMYWTDSV--LDKIEVALLDGSERKVLFYTD-LVNPRAIVVDPIRGNLYWTDWNRENPKIETSSM 1142 (1289)
T ss_pred cCCCccceeeeeccceeeeeccc--cchhheeecCCceeeEEEeec-ccCcceEEeecccCceeeccccccCCcceeecc
Confidence 99999999999999999999987 557999999999999999988 9999999999999999999997 569999999
Q ss_pred CCCceEEEec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 163 RNRVRRKVYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 163 ~g~~~~~~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
||.++++++. .+..|+||.++ ...|-|.|.+++++....++|...+++. .+++.|++|+-++++
T Consensus 1143 DG~NrRilin~DigLPNGLtfdpfs~~LCWvDAGt~rleC~~p~g~gRR~i~---~~LqYPF~itsy~~~ 1209 (1289)
T KOG1214|consen 1143 DGENRRILINTDIGLPNGLTFDPFSKLLCWVDAGTKRLECTLPDGTGRRVIQ---NNLQYPFSITSYADH 1209 (1289)
T ss_pred CCccceEEeecccCCCCCceeCcccceeeEEecCCcceeEecCCCCcchhhh---hcccCceeeeecccc
Confidence 9999998865 88999999995 7789999999999999999998888775 668899999988764
No 3
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.95 E-value=2.6e-25 Score=173.68 Aligned_cols=213 Identities=22% Similarity=0.320 Sum_probs=167.4
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|+|+.|+..++.|||+|...+ +|++++.++.....+... .|.|++++...+.||+++.. .+.+.++.....+.
T Consensus 1 l~Egp~~d~~~g~l~~~D~~~~-~i~~~~~~~~~~~~~~~~---~~~G~~~~~~~g~l~v~~~~--~~~~~d~~~g~~~~ 74 (246)
T PF08450_consen 1 LGEGPVWDPRDGRLYWVDIPGG-RIYRVDPDTGEVEVIDLP---GPNGMAFDRPDGRLYVADSG--GIAVVDPDTGKVTV 74 (246)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEETTTTEEEEEESS---SEEEEEEECTTSEEEEEETT--CEEEEETTTTEEEE
T ss_pred CCcceEEECCCCEEEEEEcCCC-EEEEEECCCCeEEEEecC---CCceEEEEccCCEEEEEEcC--ceEEEecCCCcEEE
Confidence 3789999999999999999999 999999998765333332 49999999557999999975 44555877776666
Q ss_pred EEeC-----CCCCceEEEEeCCCCeEEEEEcCCCC------CcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751 81 IVSK-----DLVNPRGIVVHPYYRKLFWSDWNRSG------PKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCW 149 (232)
Q Consensus 81 ~~~~-----~~~~p~~iavd~~~~~ly~~d~~~~~------~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~ 149 (232)
++.. .+..|+++++++ +|.||+++..... ++|++.+.+ .....+... +..||||+++++++.||+
T Consensus 75 ~~~~~~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~--~~~pNGi~~s~dg~~lyv 150 (246)
T PF08450_consen 75 LADLPDGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG--LGFPNGIAFSPDGKTLYV 150 (246)
T ss_dssp EEEEETTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE--ESSEEEEEEETTSSEEEE
T ss_pred EeeccCCCcccCCCceEEEcC-CCCEEEEecCCCccccccccceEEECCC-CeEEEEecC--cccccceEECCcchheee
Confidence 6652 578899999998 7889999875332 679999999 444555544 889999999999889999
Q ss_pred EECCCCcEEEEecCC--C---ceEEEec--C-CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCccee
Q psy5751 150 VDADSKSLECMTIRN--R---VRRKVYS--N-CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYM 220 (232)
Q Consensus 150 ~d~~~~~i~~~~~~g--~---~~~~~~~--~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p 220 (232)
+|+..++|++++++. . .++++.. . ...|+|++++ +|+||++.+.+++|.+++++|+....+..+. . .|
T Consensus 151 ~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~~~~~i~~p~--~-~~ 227 (246)
T PF08450_consen 151 ADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGKLLREIELPV--P-RP 227 (246)
T ss_dssp EETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETTSCEEEEEE-SS--S-SE
T ss_pred cccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCCccEEEEEcCCC--C-CE
Confidence 999999999999973 2 2344433 2 2469999998 7999999999999999999999888888763 2 67
Q ss_pred EEEEEE
Q psy5751 221 YGIAAV 226 (232)
Q Consensus 221 ~gi~~~ 226 (232)
..+++.
T Consensus 228 t~~~fg 233 (246)
T PF08450_consen 228 TNCAFG 233 (246)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777774
No 4
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.92 E-value=2.1e-22 Score=183.43 Aligned_cols=226 Identities=16% Similarity=0.268 Sum_probs=174.1
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-------------CCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-------------TNIRSPEGLTFDWVNRVLYWTDSQMDT 67 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-------------~~~~~p~gl~~d~~~~~ly~~d~~~~~ 67 (232)
+|-++++|..++.||++|..++ +|.+++++|.....+.. ..+..|.||++|..++.|||+|..+++
T Consensus 569 ~P~gvavd~~~g~lyVaDs~n~-rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~ 647 (1057)
T PLN02919 569 FPGKLAIDLLNNRLFISDSNHN-RIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHA 647 (1057)
T ss_pred CCceEEEECCCCeEEEEECCCC-eEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCce
Confidence 3668999988899999999999 99999999865433322 124679999999878889999999999
Q ss_pred EEEEeCCCCCCEEEEeC----------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--
Q psy5751 68 ISMANLNDDQPKVIVSK----------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-- 129 (232)
Q Consensus 68 I~~~~~~g~~~~~~~~~----------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-- 129 (232)
|.++++.+.....+... .++.|.++++++.++.||+++.. .++|++++..+.....+...
T Consensus 648 Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~--~~~I~v~d~~~g~v~~~~G~G~ 725 (1057)
T PLN02919 648 LREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG--QHQIWEYNISDGVTRVFSGDGY 725 (1057)
T ss_pred EEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC--CCeEEEEECCCCeEEEEecCCc
Confidence 99999887665555321 15689999999988999999976 56798888765544332210
Q ss_pred -----------CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEe----------------------cCCCc
Q psy5751 130 -----------ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY----------------------SNCTY 176 (232)
Q Consensus 130 -----------~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~----------------------~~~~~ 176 (232)
..+..|+||++++++++||++|..+++|.++++++.....+. ..+.+
T Consensus 726 ~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~ 805 (1057)
T PLN02919 726 ERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQH 805 (1057)
T ss_pred cccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccC
Confidence 125689999999998899999999999999999865443322 12567
Q ss_pred eEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEecc-----------CCcceeEEEEEEcCC
Q psy5751 177 PFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDM-----------MGTTYMYGIAAVPSS 229 (232)
Q Consensus 177 p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~-----------~~~~~p~gi~~~~~~ 229 (232)
|.|++++ +|.||++|+.+++|.++++.+.....+.-.+ .....|.||++.+++
T Consensus 806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG 870 (1057)
T PLN02919 806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENG 870 (1057)
T ss_pred CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCC
Confidence 9999997 6789999999999999999876655443211 124579999998764
No 5
>KOG1215|consensus
Probab=99.92 E-value=5.9e-23 Score=185.86 Aligned_cols=220 Identities=33% Similarity=0.654 Sum_probs=192.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
++++++++..++.+||+|.... .|.+...++.....+...+.-.+.++++||+.+++||+|.....|.+.+++|..+.+
T Consensus 438 ~~~~~d~d~~~~~i~~~d~~~~-~i~~~~~~~~~~~~~~~~g~~~~~~lavD~~~~~~y~tDe~~~~i~v~~~~g~~~~v 516 (877)
T KOG1215|consen 438 NAVALDFDVLNNRIYWADLSDE-KICRASQDGSSECELCGDGLCIPEGLAVDWIGDNIYWTDEGNCLIEVADLDGSSRKV 516 (877)
T ss_pred cceEEEEEecCCEEEEEeccCC-eEeeeccCCCccceEeccCccccCcEEEEeccCCceecccCCceeEEEEccCCceeE
Confidence 3578899999999999999999 999999999887676777788999999999999999999999999999999999888
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC-cEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK-SLEC 159 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~ 159 (232)
++...+..|+.++++|..+.+||++++. ..+|.+..++|.....++... +..|+|+++|...+++||+|.... .|..
T Consensus 517 l~~~~l~~~r~~~v~p~~g~~~wtd~~~-~~~i~ra~~dg~~~~~l~~~~-~~~p~glt~d~~~~~~yw~d~~~~~~i~~ 594 (877)
T KOG1215|consen 517 LVSKDLDLPRSIAVDPEKGLMFWTDWGQ-PPRIERASLDGSERAVLVTNG-ILWPNGLTIDYETDRLYWADAKLDYTIES 594 (877)
T ss_pred EEecCCCCccceeeccccCeeEEecCCC-CchhhhhcCCCCCceEEEeCC-ccCCCcceEEeecceeEEEcccCCcceee
Confidence 8887779999999999999999999997 459999999999999999987 899999999999999999999988 7999
Q ss_pred EecCCCceE-EEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEE
Q psy5751 160 MTIRNRVRR-KVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAV 226 (232)
Q Consensus 160 ~~~~g~~~~-~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~ 226 (232)
++++|.+++ .....+.+|.+++++++++||+++....+.+..+. ++. + +.. ......|..++.+
T Consensus 595 ~~~~g~~r~~~~~~~~~~p~~~~~~~~~iyw~d~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~ 660 (877)
T KOG1215|consen 595 ANMDGQNRRVVDSEDLPHPFGLSVFEDYIYWTDWSNRAISRAEKHKGSD-S-RTS-RSNLAQPLDIILV 660 (877)
T ss_pred eecCCCceEEeccccCCCceEEEEecceeEEeeccccceEeeecccCCc-c-eee-ecccCcccceEEE
Confidence 999999987 33558999999999999999999999988888877 434 2 111 2335566665555
No 6
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.89 E-value=3.9e-20 Score=168.71 Aligned_cols=202 Identities=15% Similarity=0.253 Sum_probs=160.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC----------------CCCCccEEEEeecCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT----------------NIRSPEGLTFDWVNRVLYWTDSQM 65 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~----------------~~~~p~gl~~d~~~~~ly~~d~~~ 65 (232)
|.++++++.++.||++|..++ +|+++++.+....++... .++.|.++++|+.++.||++|..+
T Consensus 626 P~GIavd~~gn~LYVaDt~n~-~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~ 704 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENH-ALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ 704 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCc-eEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence 789999998899999999988 999999887655444221 156899999999889999999999
Q ss_pred CeEEEEeCCCCCCEEEEe--------------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--
Q psy5751 66 DTISMANLNDDQPKVIVS--------------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-- 129 (232)
Q Consensus 66 ~~I~~~~~~g~~~~~~~~--------------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-- 129 (232)
++|++++..+.....+.. ..+..|.+|++++.++.||+++.. .++|.++++++.....+...
T Consensus 705 ~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~--n~~Irv~D~~tg~~~~~~gg~~ 782 (1057)
T PLN02919 705 HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE--SSSIRALDLKTGGSRLLAGGDP 782 (1057)
T ss_pred CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC--CCeEEEEECCCCcEEEEEeccc
Confidence 999999987654433221 135789999999977789999976 57899999876554333210
Q ss_pred ------------------CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec--------------CCCce
Q psy5751 130 ------------------ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS--------------NCTYP 177 (232)
Q Consensus 130 ------------------~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~--------------~~~~p 177 (232)
..+..|.|++++++ +.||++|..+++|.+++.++.....+.. .+..|
T Consensus 783 ~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d-G~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P 861 (1057)
T PLN02919 783 TFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD-GQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEP 861 (1057)
T ss_pred ccCcccccccCCCCchhhhhccCCceeeEeCC-CcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCc
Confidence 02457999999987 6799999999999999998776655432 35679
Q ss_pred EEEEEE-CCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751 178 FGLSIT-DEKYYWTDWKTNRIESANKEGERA 207 (232)
Q Consensus 178 ~gla~~-~~~ly~td~~~~~i~~~~~~g~~~ 207 (232)
.||+++ +|+||++|..+++|..++..+...
T Consensus 862 ~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 862 AGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 999996 789999999999999999985443
No 7
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.3e-19 Score=144.02 Aligned_cols=207 Identities=17% Similarity=0.222 Sum_probs=152.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~ 80 (232)
.+|..|+...+.|||+|+.++ +|.+++......+....+. ..+.+..+|. .+.|..++.. +++.+.+ +..+..
T Consensus 27 gEgP~w~~~~~~L~w~DI~~~-~i~r~~~~~g~~~~~~~p~-~~~~~~~~d~-~g~Lv~~~~g---~~~~~~~~~~~~t~ 100 (307)
T COG3386 27 GEGPVWDPDRGALLWVDILGG-RIHRLDPETGKKRVFPSPG-GFSSGALIDA-GGRLIACEHG---VRLLDPDTGGKITL 100 (307)
T ss_pred ccCccCcCCCCEEEEEeCCCC-eEEEecCCcCceEEEECCC-CcccceeecC-CCeEEEEccc---cEEEeccCCceeEE
Confidence 356789999999999999999 9999999854443444333 4567777776 6777766654 3333333 222233
Q ss_pred EEe----CCCCCceEEEEeCCCCeEEEEEcC---------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEE
Q psy5751 81 IVS----KDLVNPRGIVVHPYYRKLFWSDWN---------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDEL 147 (232)
Q Consensus 81 ~~~----~~~~~p~~iavd~~~~~ly~~d~~---------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~L 147 (232)
+.. ....+|++..++| .|.+|+++.. +..+.+|+++.+|...+.+.. . +..||||++++++..|
T Consensus 101 ~~~~~~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~-~-~~~~NGla~SpDg~tl 177 (307)
T COG3386 101 LAEPEDGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDD-D-LTIPNGLAFSPDGKTL 177 (307)
T ss_pred eccccCCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecC-c-EEecCceEECCCCCEE
Confidence 333 3567899999998 7999999887 335689999886555444433 3 8899999999999999
Q ss_pred EEEECCCCcEEEEecC---CC--ceE-EEec--CCCceEEEEEE-CCEEE-EEeCCCCcEEEEeCCCCCcceEEeccCCc
Q psy5751 148 CWVDADSKSLECMTIR---NR--VRR-KVYS--NCTYPFGLSIT-DEKYY-WTDWKTNRIESANKEGERAPSIALDMMGT 217 (232)
Q Consensus 148 y~~d~~~~~i~~~~~~---g~--~~~-~~~~--~~~~p~gla~~-~~~ly-~td~~~~~i~~~~~~g~~~~~i~~~~~~~ 217 (232)
|++|+..++|++++++ +. +++ .+.. .-..|+|+++| +|.|| .+.++..+|.+++++|.....+.+|...+
T Consensus 178 y~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~lP~~~~ 257 (307)
T COG3386 178 YVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKLPVKRP 257 (307)
T ss_pred EEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEECCCCCC
Confidence 9999999999999987 22 222 2222 34789999998 66777 55666669999999999999999885333
No 8
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.82 E-value=9.7e-18 Score=130.99 Aligned_cols=175 Identities=20% Similarity=0.229 Sum_probs=135.9
Q ss_pred ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEE
Q psy5751 46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREI 125 (232)
Q Consensus 46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~ 125 (232)
++|++.|...+.|||+|...++|++++.++.....+.. ..|.|++++..++.||+++.. .+...++.....+.
T Consensus 2 ~Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~---~~~~G~~~~~~~g~l~v~~~~----~~~~~d~~~g~~~~ 74 (246)
T PF08450_consen 2 GEGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDL---PGPNGMAFDRPDGRLYVADSG----GIAVVDPDTGKVTV 74 (246)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEES---SSEEEEEEECTTSEEEEEETT----CEEEEETTTTEEEE
T ss_pred CcceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEec---CCCceEEEEccCCEEEEEEcC----ceEEEecCCCcEEE
Confidence 68999998899999999999999999999876555433 239999999558999999954 35666887777776
Q ss_pred EEEcC----CCCCcceEEEeCCCCEEEEEECCC--------CcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEe
Q psy5751 126 FLKAA----DLKLPNSLAVDFRTDELCWVDADS--------KSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD 191 (232)
Q Consensus 126 ~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~--------~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td 191 (232)
+.... ....||++++|++ |+||+++... +++++++.+ ++.+.+.+.+..|+||++. +..||+++
T Consensus 75 ~~~~~~~~~~~~~~ND~~vd~~-G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~d 152 (246)
T PF08450_consen 75 LADLPDGGVPFNRPNDVAVDPD-GNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEEETTCSCTEEEEEEEE-TT-S-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEE
T ss_pred EeeccCCCcccCCCceEEEcCC-CCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecc
Confidence 66541 3778999999997 7899998764 569999999 5667778889999999996 56899999
Q ss_pred CCCCcEEEEeCCCCCc-----ceEEeccCCcceeEEEEEEcCC
Q psy5751 192 WKTNRIESANKEGERA-----PSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 192 ~~~~~i~~~~~~g~~~-----~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
...++|++++.+.... +.+.......+.|.|+++..++
T Consensus 153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G 195 (246)
T PF08450_consen 153 SFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG 195 (246)
T ss_dssp TTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS
T ss_pred cccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCC
Confidence 9999999999973332 2232222233579999998765
No 9
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.68 E-value=4.1e-13 Score=109.90 Aligned_cols=200 Identities=15% Similarity=0.164 Sum_probs=146.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeE---EEe----------CCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVED---VIT----------TNIRSPEGLTFDWVNRVLYWTDSQMDT 67 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~---~~~----------~~~~~p~gl~~d~~~~~ly~~d~~~~~ 67 (232)
|..+++++....||+++...+ .|..+.++.. .... +.. ....+|..+.+++.++.+|++|.+..+
T Consensus 89 p~~i~~~~~g~~l~vany~~g-~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~ 167 (345)
T PF10282_consen 89 PCHIAVDPDGRFLYVANYGGG-SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADR 167 (345)
T ss_dssp EEEEEECTTSSEEEEEETTTT-EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTE
T ss_pred cEEEEEecCCCEEEEEEccCC-eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCE
Confidence 678999999999999999988 8888888742 2211 221 124688999999999999999999999
Q ss_pred EEEEeCCCCC--C---EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC--CCCcEEEEEcC-------CCC
Q psy5751 68 ISMANLNDDQ--P---KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD--GTDREIFLKAA-------DLK 133 (232)
Q Consensus 68 I~~~~~~g~~--~---~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~--g~~~~~~~~~~-------~~~ 133 (232)
|++++++... . ..+--.....|+.++++|..+.+|++... .+.|..++++ ....+.+.... ...
T Consensus 168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~--s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 245 (345)
T PF10282_consen 168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNEL--SNTVSVFDYDPSDGSLTEIQTISTLPEGFTGEN 245 (345)
T ss_dssp EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESCETTSCSSS
T ss_pred EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCC--CCcEEEEeecccCCceeEEEEeeeccccccccC
Confidence 9999987765 2 12222567789999999988999999855 4567777766 22222221111 012
Q ss_pred CcceEEEeCCCCEEEEEECCCCcEEEEecCC--CceEEE---ecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCC
Q psy5751 134 LPNSLAVDFRTDELCWVDADSKSLECMTIRN--RVRRKV---YSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 134 ~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g--~~~~~~---~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g 204 (232)
.|.+|++++++++||+++...+.|..++++. +..+.+ -.....|.++++ ++.+||+++..++.|..++.+.
T Consensus 246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~ 323 (345)
T PF10282_consen 246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP 323 (345)
T ss_dssp SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence 6889999999999999999999999999853 333333 225777999999 5789999999999999887763
No 10
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.64 E-value=1.4e-12 Score=106.75 Aligned_cols=226 Identities=16% Similarity=0.159 Sum_probs=156.6
Q ss_pred eEEEEEeCCCCEEEEEEcCC--CCcEEEEEcCCC--ceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVAD--KSSIKRAHLDGK--NVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~--~~~i~~~~~~g~--~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
|.-+++++..+.||.++... .+.|..+.++.. ..+.+- ...-..|..+++|+.++.||++++..+.+.+++++.
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~ 118 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD 118 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence 56788999999999999852 237777776643 332222 123468899999999999999999999998888765
Q ss_pred CC--CEE--EEe----------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEE--EEEcCCCCCcce
Q psy5751 76 DQ--PKV--IVS----------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REI--FLKAADLKLPNS 137 (232)
Q Consensus 76 ~~--~~~--~~~----------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~--~~~~~~~~~p~~ 137 (232)
.. ... +.. ....+|..+.++|.+++||++|.+. .+|+.++++... ... .+.......|..
T Consensus 119 ~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~--D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh 196 (345)
T PF10282_consen 119 DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA--DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRH 196 (345)
T ss_dssp TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT--TEEEEEEE-TTS-TEEEEEEEECSTTSSEEE
T ss_pred CcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC--CEEEEEEEeCCCceEEEeeccccccCCCCcE
Confidence 32 222 221 1356889999999889999999874 568888876654 322 122223678999
Q ss_pred EEEeCCCCEEEEEECCCCcEEEEecC--CCceEEEe--c-------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-
Q psy5751 138 LAVDFRTDELCWVDADSKSLECMTIR--NRVRRKVY--S-------NCTYPFGLSIT--DEKYYWTDWKTNRIESANKE- 203 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~~~~~i~~~~~~--g~~~~~~~--~-------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~- 203 (232)
+++++++.++|+++...+.|..++++ .+..+.+. . ....|.+|++. +.+||+++.+.+.|..++.+
T Consensus 197 ~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~ 276 (345)
T PF10282_consen 197 LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDP 276 (345)
T ss_dssp EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence 99999999999999999999999888 33333221 1 12368889985 77999999999998888875
Q ss_pred -CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 204 -GERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 204 -g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++.++.+..-.-+-..|.++++.+++
T Consensus 277 ~~g~l~~~~~~~~~G~~Pr~~~~s~~g 303 (345)
T PF10282_consen 277 ATGTLTLVQTVPTGGKFPRHFAFSPDG 303 (345)
T ss_dssp TTTTEEEEEEEEESSSSEEEEEE-TTS
T ss_pred CCCceEEEEEEeCCCCCccEEEEeCCC
Confidence 33444443322223359999997664
No 11
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.64 E-value=1.5e-12 Score=106.07 Aligned_cols=222 Identities=15% Similarity=0.141 Sum_probs=150.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
.|..+++++.++.||.++...+ .|..++++ |...+.+. ......|.++++++.++.+|+++...+.|.+++++...
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~-~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g 159 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNAN-CVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG 159 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCC-eEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence 3678999999999999998877 88888776 32211111 12346789999999899999999999999999986532
Q ss_pred C------EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEEEEcC-------CCCCcceEEEeC
Q psy5751 78 P------KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIFLKAA-------DLKLPNSLAVDF 142 (232)
Q Consensus 78 ~------~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~~~~~-------~~~~p~~l~~d~ 142 (232)
. ..+.......|++++++|..++||+++.. .+.|...+++. ...+.+.... ...+|.++++++
T Consensus 160 ~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~--~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~p 237 (330)
T PRK11028 160 HLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNEL--NSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITP 237 (330)
T ss_pred cccccCCCceecCCCCCCceEEECCCCCEEEEEecC--CCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECC
Confidence 1 11111234679999999988899999865 45677777652 2222221110 012455799999
Q ss_pred CCCEEEEEECCCCcEEEEecC--CCceEEEec--CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC--CCCcceEEecc
Q psy5751 143 RTDELCWVDADSKSLECMTIR--NRVRRKVYS--NCTYPFGLSIT--DEKYYWTDWKTNRIESANKE--GERAPSIALDM 214 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~--g~~~~~~~~--~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~--g~~~~~i~~~~ 214 (232)
++++||+++...+.|..++++ +...+.+.. ....|.++++. +.+||+++..++.|..++.+ +..++.+.. .
T Consensus 238 dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~-~ 316 (330)
T PRK11028 238 DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGR-Y 316 (330)
T ss_pred CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEccc-c
Confidence 999999998888888887774 333333322 33578888884 77999999888888887654 333443322 1
Q ss_pred CCcceeEEEEEE
Q psy5751 215 MGTTYMYGIAAV 226 (232)
Q Consensus 215 ~~~~~p~gi~~~ 226 (232)
.....|..|++.
T Consensus 317 ~~g~~P~~~~~~ 328 (330)
T PRK11028 317 AVGQGPMWVSVL 328 (330)
T ss_pred ccCCCceEEEEE
Confidence 224578888874
No 12
>KOG1215|consensus
Probab=99.63 E-value=7.5e-14 Score=127.00 Aligned_cols=199 Identities=27% Similarity=0.491 Sum_probs=166.6
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW 103 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~ 103 (232)
.+.++.++.... .........+..+.+|..++.+||+|.....|.....++.....+...+.-.|.++++|...+.+||
T Consensus 418 ~ir~~~~~~~~~-~~p~~~~~~~~~~d~d~~~~~i~~~d~~~~~i~~~~~~~~~~~~~~~~g~~~~~~lavD~~~~~~y~ 496 (877)
T KOG1215|consen 418 DIRRISLDCSDV-SRPLEGIKNAVALDFDVLNNRIYWADLSDEKICRASQDGSSECELCGDGLCIPEGLAVDWIGDNIYW 496 (877)
T ss_pred cceecccCCCcc-eEEccCCccceEEEEEecCCEEEEEeccCCeEeeeccCCCccceEeccCccccCcEEEEeccCCcee
Confidence 566666765522 2222334678888888889999999999999999999999877777778889999999999999999
Q ss_pred EEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC-CCcEEEEecCCCceEEEec-CCCceEEEE
Q psy5751 104 SDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD-SKSLECMTIRNRVRRKVYS-NCTYPFGLS 181 (232)
Q Consensus 104 ~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~~~~~g~~~~~~~~-~~~~p~gla 181 (232)
+|.. ...|.+.+++|....+++... +..|..+++++..+.+||+|++ ..+|.+..++|..+..+.. +..+|.|++
T Consensus 497 tDe~--~~~i~v~~~~g~~~~vl~~~~-l~~~r~~~v~p~~g~~~wtd~~~~~~i~ra~~dg~~~~~l~~~~~~~p~glt 573 (877)
T KOG1215|consen 497 TDEG--NCLIEVADLDGSSRKVLVSKD-LDLPRSIAVDPEKGLMFWTDWGQPPRIERASLDGSERAVLVTNGILWPNGLT 573 (877)
T ss_pred cccC--CceeEEEEccCCceeEEEecC-CCCccceeeccccCeeEEecCCCCchhhhhcCCCCCceEEEeCCccCCCcce
Confidence 9976 456888889999888888776 6899999999999999999998 4589999999999988866 589999999
Q ss_pred EE--CCEEEEEeCCCC-cEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 182 IT--DEKYYWTDWKTN-RIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 182 ~~--~~~ly~td~~~~-~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
.+ .+.+||+|.... .+.+++.+|.+.+ ........+|++++++.+
T Consensus 574 ~d~~~~~~yw~d~~~~~~i~~~~~~g~~r~--~~~~~~~~~p~~~~~~~~ 621 (877)
T KOG1215|consen 574 IDYETDRLYWADAKLDYTIESANMDGQNRR--VVDSEDLPHPFGLSVFED 621 (877)
T ss_pred EEeecceeEEEcccCCcceeeeecCCCceE--EeccccCCCceEEEEecc
Confidence 85 889999999988 7999999999987 222355779999998875
No 13
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=99.61 E-value=1.7e-12 Score=107.47 Aligned_cols=223 Identities=13% Similarity=0.182 Sum_probs=167.9
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
+|.++.+++....+|+++...+ .+..++.. ....+. ...+...|.++++...+.++|+.+...+.|.+.+.......
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~-~~~~~~~~-~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~ 109 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSN-DVSVIDAT-SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVL 109 (381)
T ss_pred CCceeEEcCccCEEEEEeecCc-eeeecccc-cceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCccccee
Confidence 3678899998889999998877 77777666 332222 33344789999999999999999999999999996655543
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.... ....|.++++++.++.+|+++.+...+.+..++............ ...|.++++++.+.++|+++...+.|..
T Consensus 110 ~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v--G~~P~~~a~~p~g~~vyv~~~~~~~v~v 186 (381)
T COG3391 110 GSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV--GNTPTGVAVDPDGNKVYVTNSDDNTVSV 186 (381)
T ss_pred eEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec--CCCcceEEECCCCCeEEEEecCCCeEEE
Confidence 3333 223899999999999999999853356788777665443333222 3478999999999999999999999999
Q ss_pred EecCCCceEE-----EecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 160 MTIRNRVRRK-----VYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 160 ~~~~g~~~~~-----~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++.++..... .......|.++++ +..++|+++..+ +.+..++...........+.... .|.++++.++.
T Consensus 187 i~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g 264 (381)
T COG3391 187 IDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAG 264 (381)
T ss_pred EeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCC
Confidence 9988765442 2446788999998 467899999988 68988888876666554455445 78888876653
No 14
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.60 E-value=4e-12 Score=103.52 Aligned_cols=223 Identities=13% Similarity=0.098 Sum_probs=147.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--CCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--DDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--g~~ 77 (232)
|..+++++..+.||++....+ .|..++++.. ....+-. .....|..+++++.++.||.+....+.|.+.+++ |..
T Consensus 37 ~~~l~~spd~~~lyv~~~~~~-~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~ 115 (330)
T PRK11028 37 VQPMVISPDKRHLYVGVRPEF-RVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIP 115 (330)
T ss_pred CccEEECCCCCEEEEEECCCC-cEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCC
Confidence 567889998899999988777 8877777632 2211111 1224789999999999999999888888888775 322
Q ss_pred CEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE-----EEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751 78 PKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE-----IFLKAADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 78 ~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~-----~~~~~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
...+.. .....|.+++++|.++++|+++.+ .++|...+++..... ..........|.++++++++++||+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~--~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~ 193 (330)
T PRK11028 116 VAPIQIIEGLEGCHSANIDPDNRTLWVPCLK--EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVN 193 (330)
T ss_pred CCceeeccCCCcccEeEeCCCCCEEEEeeCC--CCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEe
Confidence 222211 244678999999988899999976 456888877642211 011111145799999999999999999
Q ss_pred CCCCcEEEEecCC--CceEEEec--C-------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCC--CCCcceEEeccCC
Q psy5751 152 ADSKSLECMTIRN--RVRRKVYS--N-------CTYPFGLSIT--DEKYYWTDWKTNRIESANKE--GERAPSIALDMMG 216 (232)
Q Consensus 152 ~~~~~i~~~~~~g--~~~~~~~~--~-------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~--g~~~~~i~~~~~~ 216 (232)
...+.|..++++. +..+.+.. . ..+|.++++. +.+||+++...+.|..++.+ +...+.+....-
T Consensus 194 ~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~- 272 (330)
T PRK11028 194 ELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT- 272 (330)
T ss_pred cCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-
Confidence 9889998888872 23222221 1 1234456763 56899998888888877764 444333332111
Q ss_pred cceeEEEEEEcC
Q psy5751 217 TTYMYGIAAVPS 228 (232)
Q Consensus 217 ~~~p~gi~~~~~ 228 (232)
...|.++++.++
T Consensus 273 ~~~p~~~~~~~d 284 (330)
T PRK11028 273 ETQPRGFNIDHS 284 (330)
T ss_pred cccCCceEECCC
Confidence 235667766554
No 15
>KOG4659|consensus
Probab=99.59 E-value=2.3e-13 Score=120.82 Aligned_cols=195 Identities=21% Similarity=0.318 Sum_probs=143.4
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe---CCCCCccEEEEeecCCeEEEEeCCCCeEEEE-eCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT---TNIRSPEGLTFDWVNRVLYWTDSQMDTISMA-NLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~---~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~-~~~g~ 76 (232)
.|+++++-+ ++.||+.|.+ -|.|+..+|.-. .++. ....+-.-||+++..+.||++|...++|+++ ++.++
T Consensus 366 aPvala~a~-DGSl~VGDfN---yIRRI~~dg~v~-tIl~L~~t~~sh~Yy~AvsPvdgtlyvSdp~s~qv~rv~sl~~~ 440 (1899)
T KOG4659|consen 366 APVALAYAP-DGSLIVGDFN---YIRRISQDGQVS-TILTLGLTDTSHSYYIAVSPVDGTLYVSDPLSKQVWRVSSLEPQ 440 (1899)
T ss_pred ceeeEEEcC-CCcEEEccch---heeeecCCCceE-EEEEecCCCccceeEEEecCcCceEEecCCCcceEEEeccCCcc
Confidence 388999987 9999999987 789988888654 3333 3456778899999999999999999999987 45543
Q ss_pred CC----EEEEeC--------------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--
Q psy5751 77 QP----KVIVSK--------------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-- 130 (232)
Q Consensus 77 ~~----~~~~~~--------------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-- 130 (232)
.. +++..+ .+..|+||++|. .|.||++|.. .|.+++-+|-..+++-+..
T Consensus 441 d~~~N~evvaG~Ge~Clp~desCGDGalA~dA~L~~PkGIa~dk-~g~lYfaD~t----~IR~iD~~giIstlig~~~~~ 515 (1899)
T KOG4659|consen 441 DSRNNYEVVAGDGEVCLPADESCGDGALAQDAQLIFPKGIAFDK-MGNLYFADGT----RIRVIDTTGIISTLIGTTPDQ 515 (1899)
T ss_pred ccccCeeEEeccCcCccccccccCcchhcccceeccCCceeEcc-CCcEEEeccc----EEEEeccCceEEEeccCCCCc
Confidence 21 222221 477899999996 8999999954 4888887665333222111
Q ss_pred ---------------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec---------------------CC
Q psy5751 131 ---------------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS---------------------NC 174 (232)
Q Consensus 131 ---------------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---------------------~~ 174 (232)
.+.+|..|+++|-.+.||+.| ++.|.++..++.-+ +++. .+
T Consensus 516 ~~p~~C~~~~kl~~~~leWPT~LaV~Pmdnsl~Vld--~nvvlrit~~~rV~-Ii~GrP~hC~~a~~t~~~skla~H~tl 592 (1899)
T KOG4659|consen 516 HPPRTCAQITKLVDLQLEWPTSLAVDPMDNSLLVLD--TNVVLRITVVHRVR-IILGRPTHCDLANATSSASKLADHRTL 592 (1899)
T ss_pred cCccccccccchhheeeecccceeecCCCCeEEEee--cceEEEEccCccEE-EEcCCccccccCCCchhhhhhhhhhhh
Confidence 278999999999999999999 56677777765322 3321 23
Q ss_pred CceEEEEE-ECCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 175 TYPFGLSI-TDEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 175 ~~p~gla~-~~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
-.+..|++ ..|.||+++..+.+|-|+.+-+...+
T Consensus 593 ~~~r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~ 627 (1899)
T KOG4659|consen 593 LIQRDIAVGTDGALYVAESDGRRINRVRKLSTDGT 627 (1899)
T ss_pred hhhhceeecCCceEEEEeccchhhhheEEeccCce
Confidence 33678888 58999999999988888876655543
No 16
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=99.52 E-value=2.7e-11 Score=100.38 Aligned_cols=221 Identities=14% Similarity=0.162 Sum_probs=163.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC--CCCeEEEEeCCCCCCE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS--QMDTISMANLNDDQPK 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~ 79 (232)
|.+++++....++|+.+...+ .|.+++.........+..+ ..|.++++++.++.+|+++. .++.+.+.+.......
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~-~v~vid~~~~~~~~~~~vG-~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~ 153 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSN-TVSVIDTATNTVLGSIPVG-LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT 153 (381)
T ss_pred ccceeeCCCCCeEEEecCCCC-eEEEEcCcccceeeEeeec-cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence 567889999999999998888 8999996654433333333 39999999999999999999 4689999998876644
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE----cCCCCCcceEEEeCCCCEEEEEECCC-
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----AADLKLPNSLAVDFRTDELCWVDADS- 154 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----~~~~~~p~~l~~d~~~~~Ly~~d~~~- 154 (232)
.... ....|.+++++|....+|+++.. .+.|...+..+..... .. ......|.++++++++.++|+++...
T Consensus 154 ~~~~-vG~~P~~~a~~p~g~~vyv~~~~--~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~ 229 (381)
T COG3391 154 ATIP-VGNTPTGVAVDPDGNKVYVTNSD--DNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG 229 (381)
T ss_pred EEEe-cCCCcceEEECCCCCeEEEEecC--CCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence 3333 33378999999988889999954 5678888866554442 11 11267899999999999999999887
Q ss_pred -CcEEEEecCCCceEEE---ecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCCcc-eEEeccCCcceeEEEEEEc
Q psy5751 155 -KSLECMTIRNRVRRKV---YSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGERAP-SIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 155 -~~i~~~~~~g~~~~~~---~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~~~-~i~~~~~~~~~p~gi~~~~ 227 (232)
+.+..++......... .+.. .|.++++ ++..+|+++...+.+..++....... .+.........|+.++...
T Consensus 230 ~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~ 308 (381)
T COG3391 230 SNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP 308 (381)
T ss_pred CceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence 6899988887665443 3355 8999998 47899999998899999998754444 2222223344577777655
Q ss_pred CC
Q psy5751 228 SS 229 (232)
Q Consensus 228 ~~ 229 (232)
..
T Consensus 309 ~~ 310 (381)
T COG3391 309 LY 310 (381)
T ss_pred ec
Confidence 43
No 17
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=99.51 E-value=7.7e-11 Score=91.11 Aligned_cols=195 Identities=19% Similarity=0.188 Sum_probs=124.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC--CCC-
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND--DQP- 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g--~~~- 78 (232)
+.|++|++.+++||...-... .|+.++++|.-.+++-..+...++||++-. ++.+.+++...++++.++.+. ...
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~~-~i~els~~G~vlr~i~l~g~~D~EgI~y~g-~~~~vl~~Er~~~L~~~~~~~~~~~~~ 101 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEPG-EIYELSLDGKVLRRIPLDGFGDYEGITYLG-NGRYVLSEERDQRLYIFTIDDDTTSLD 101 (248)
T ss_dssp EEEEEEETTTTEEEEEETTTT-EEEEEETT--EEEEEE-SS-SSEEEEEE-S-TTEEEEEETTTTEEEEEEE----TT--
T ss_pred ccccEEcCCCCeEEEEECCCC-EEEEEcCCCCEEEEEeCCCCCCceeEEEEC-CCEEEEEEcCCCcEEEEEEeccccccc
Confidence 579999999999998887777 999999998776666667788999999975 566666787788898887733 221
Q ss_pred -EE--EEe-----CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC--CCCCcEEEEEc------CCCCCcceEEEeC
Q psy5751 79 -KV--IVS-----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL--DGTDREIFLKA------ADLKLPNSLAVDF 142 (232)
Q Consensus 79 -~~--~~~-----~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~--~g~~~~~~~~~------~~~~~p~~l~~d~ 142 (232)
.. -+. .......|+|.|+.++.||++.-. ....|+..+. .+....+.... .....|+++++|+
T Consensus 102 ~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~-~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p 180 (248)
T PF06977_consen 102 RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER-KPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDP 180 (248)
T ss_dssp EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES-SSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEET
T ss_pred hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC-CChhhEEEccccCccceeeccccccccccceeccccceEEcC
Confidence 11 111 123346899999999999988543 2445777765 22222222211 1256799999999
Q ss_pred CCCEEEEEECCCCcEEEEecCCCceEEE-ec--------CCCceEEEEEE-CCEEEEEeCCCCcEEEE
Q psy5751 143 RTDELCWVDADSKSLECMTIRNRVRRKV-YS--------NCTYPFGLSIT-DEKYYWTDWKTNRIESA 200 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-~~--------~~~~p~gla~~-~~~ly~td~~~~~i~~~ 200 (232)
.++.||+......++..++.+|.-...+ +. .++.|.|||++ +|.||++.-- +..++|
T Consensus 181 ~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEp-Nlfy~f 247 (248)
T PF06977_consen 181 RTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEP-NLFYRF 247 (248)
T ss_dssp TTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETT-TEEEEE
T ss_pred CCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCC-ceEEEe
Confidence 9999999999999999999888744433 22 35779999997 7899999864 456665
No 18
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=99.51 E-value=6e-12 Score=100.38 Aligned_cols=186 Identities=18% Similarity=0.187 Sum_probs=138.2
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~ 116 (232)
.++.......+|...++..+.|||+|-..++|.+.+......++... ....+.+..++. .+.|..++.+ +.+.
T Consensus 18 ~~~~~~~~~gEgP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~-p~~~~~~~~~d~-~g~Lv~~~~g-----~~~~ 90 (307)
T COG3386 18 TLLDKGATLGEGPVWDPDRGALLWVDILGGRIHRLDPETGKKRVFPS-PGGFSSGALIDA-GGRLIACEHG-----VRLL 90 (307)
T ss_pred eEeecccccccCccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEEC-CCCcccceeecC-CCeEEEEccc-----cEEE
Confidence 45555667888889999899999999999999999998555555444 333477888885 7888888755 4555
Q ss_pred eCCCCCc-EEEEEcC---CCCCcceEEEeCCCCEEEEEECC-----------CCcEEEEecCCCceEEEecCCCceEEEE
Q psy5751 117 NLDGTDR-EIFLKAA---DLKLPNSLAVDFRTDELCWVDAD-----------SKSLECMTIRNRVRRKVYSNCTYPFGLS 181 (232)
Q Consensus 117 ~~~g~~~-~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~-----------~~~i~~~~~~g~~~~~~~~~~~~p~gla 181 (232)
+.+.... +.+.... ....||...++++ |++|+++.. .+++++++++|...+.+...+..|+|||
T Consensus 91 ~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pd-G~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla 169 (307)
T COG3386 91 DPDTGGKITLLAEPEDGLPLNRPNDGVVDPD-GRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLA 169 (307)
T ss_pred eccCCceeEEeccccCCCCcCCCCceeEcCC-CCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceE
Confidence 5453433 4443321 3678999999998 999999877 3579999997766665555699999999
Q ss_pred E--ECCEEEEEeCCCCcEEEEeCC---CCCcc--eEEeccCCcceeEEEEEEcCCC
Q psy5751 182 I--TDEKYYWTDWKTNRIESANKE---GERAP--SIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 182 ~--~~~~ly~td~~~~~i~~~~~~---g~~~~--~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
+ ++..||++|+..++|.++..+ +.... ........++.|.|+++..+.|
T Consensus 170 ~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~ 225 (307)
T COG3386 170 FSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGN 225 (307)
T ss_pred ECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCC
Confidence 9 466999999999999999876 32222 2233334578899999998876
No 19
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=99.48 E-value=5.9e-11 Score=97.95 Aligned_cols=221 Identities=17% Similarity=0.164 Sum_probs=145.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCC----------C-CcEEEEEc---CCCc-eeEEEeCCCCCccEEEEeecCCeEEEEeCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVAD----------K-SSIKRAHL---DGKN-VEDVITTNIRSPEGLTFDWVNRVLYWTDSQM 65 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~----------~-~~i~~~~~---~g~~-~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~ 65 (232)
.|++|++|. +++||+++..+ . .+|.++.- +|.. ..+++...+..|.||+++. ++ ||+++..
T Consensus 15 ~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV~~~~- 90 (367)
T TIGR02604 15 NPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYVATPP- 90 (367)
T ss_pred CCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEEeCCC-
Confidence 488999998 78999998521 1 17887764 2332 3366777889999999986 44 9998754
Q ss_pred CeEEEE-eCCCC-----CCEEEEe---CC----CCCceEEEEeCCCCeEEEEEcCC-----------------CCCcEEE
Q psy5751 66 DTISMA-NLNDD-----QPKVIVS---KD----LVNPRGIVVHPYYRKLFWSDWNR-----------------SGPKIEW 115 (232)
Q Consensus 66 ~~I~~~-~~~g~-----~~~~~~~---~~----~~~p~~iavd~~~~~ly~~d~~~-----------------~~~~I~~ 115 (232)
.|+++ +.++. .+++++. .. ...+++++++| +|+||++.... ..+.|++
T Consensus 91 -~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gp-DG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r 168 (367)
T TIGR02604 91 -DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGP-DGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFR 168 (367)
T ss_pred -eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECC-CCCEEEecccCCCceeccCCCccCcccccCceEEE
Confidence 67766 55543 2344544 11 23478999998 78999987621 1257999
Q ss_pred EeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC------------CC---------ceEE-----
Q psy5751 116 SNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR------------NR---------VRRK----- 169 (232)
Q Consensus 116 ~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~------------g~---------~~~~----- 169 (232)
++.++...+++... +.+|+|+++|+. +.||++|...+...++..- +. ....
T Consensus 169 ~~pdg~~~e~~a~G--~rnp~Gl~~d~~-G~l~~tdn~~~~~~~i~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (367)
T TIGR02604 169 YNPDGGKLRVVAHG--FQNPYGHSVDSW-GDVFFCDNDDPPLCRVTPVAEGGRNGYQSFNGRRYDHADRGADHEVPTGEW 245 (367)
T ss_pred EecCCCeEEEEecC--cCCCccceECCC-CCEEEEccCCCceeEEcccccccccCCCCCCCccccccccccccccccccc
Confidence 99999888876654 899999999995 8999998865544444321 00 0000
Q ss_pred ----------E--ecCCCceEEEEEE---------CCEEEEEeCCCCcEEEEeCC--CCCcce----EEeccCCcceeEE
Q psy5751 170 ----------V--YSNCTYPFGLSIT---------DEKYYWTDWKTNRIESANKE--GERAPS----IALDMMGTTYMYG 222 (232)
Q Consensus 170 ----------~--~~~~~~p~gla~~---------~~~ly~td~~~~~i~~~~~~--g~~~~~----i~~~~~~~~~p~g 222 (232)
. ......|.|+++. ++.++++++..+.|.++... |..... +......-..|..
T Consensus 246 ~~~~~~~~~~~~~~g~~~ap~G~~~y~g~~fp~~~~g~~fv~~~~~~~v~~~~l~~~g~~~~~~~~~~l~~~~~~~rp~d 325 (367)
T TIGR02604 246 RQDDRGVETVGDVAGGGTAPCGIAFYRGDALPEEYRGLLLVGDAHGQLIVRYSLEPKGAGFKGERPEFLRSNDTWFRPVN 325 (367)
T ss_pred ccccccccccccccCCCccccEEEEeCCCcCCHHHCCCEEeeeccCCEEEEEEeecCCCccEeecCceEecCCCcccccc
Confidence 0 0012368899875 36899999999999999865 432221 1110011146777
Q ss_pred EEEEcCCC
Q psy5751 223 IAAVPSSC 230 (232)
Q Consensus 223 i~~~~~~~ 230 (232)
|++.++++
T Consensus 326 v~~~pDG~ 333 (367)
T TIGR02604 326 VTVGPDGA 333 (367)
T ss_pred eeECCCCC
Confidence 88777653
No 20
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=99.44 E-value=5.4e-11 Score=90.70 Aligned_cols=216 Identities=11% Similarity=0.075 Sum_probs=153.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
|..++-++ ++.+++++...+ .|.+++......++.-...-..|.+|.+++ .+..+++|..+ .|.+++.+....+..
T Consensus 64 p~dvapap-dG~VWft~qg~g-aiGhLdP~tGev~~ypLg~Ga~Phgiv~gp-dg~~Witd~~~-aI~R~dpkt~evt~f 139 (353)
T COG4257 64 PFDVAPAP-DGAVWFTAQGTG-AIGHLDPATGEVETYPLGSGASPHGIVVGP-DGSAWITDTGL-AIGRLDPKTLEVTRF 139 (353)
T ss_pred ccccccCC-CCceEEecCccc-cceecCCCCCceEEEecCCCCCCceEEECC-CCCeeEecCcc-eeEEecCcccceEEe
Confidence 34455555 778888888888 899998887766555555558999999999 56788899887 899988755543322
Q ss_pred Ee---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 82 VS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 82 ~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
-- ....+.+...+|+ .|.|+|+.... ---|.+.....+++.-.. +-..|+||++.++ +.+|++....+.|-
T Consensus 140 ~lp~~~a~~nlet~vfD~-~G~lWFt~q~G---~yGrLdPa~~~i~vfpaP-qG~gpyGi~atpd-Gsvwyaslagnaia 213 (353)
T COG4257 140 PLPLEHADANLETAVFDP-WGNLWFTGQIG---AYGRLDPARNVISVFPAP-QGGGPYGICATPD-GSVWYASLAGNAIA 213 (353)
T ss_pred ecccccCCCcccceeeCC-CccEEEeeccc---cceecCcccCceeeeccC-CCCCCcceEECCC-CcEEEEeccccceE
Confidence 21 2233445677897 89999998642 223555555555555443 3788999999997 89999999899999
Q ss_pred EEecCCCceEEEec-C--CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 159 CMTIRNRVRRKVYS-N--CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 159 ~~~~~g~~~~~~~~-~--~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
++|+-....+++.. . -+....+-.+ .++++.|+|.++.+.++++...+.....+|..++ +|+.+-|...
T Consensus 214 ridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~a-rpys~rVD~~ 286 (353)
T COG4257 214 RIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKA-RPYSMRVDRH 286 (353)
T ss_pred EcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCC-CcceeeeccC
Confidence 99887654444422 1 1122333344 7899999999999999999988888777766555 6777776654
No 21
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=99.44 E-value=2.4e-11 Score=100.30 Aligned_cols=153 Identities=19% Similarity=0.228 Sum_probs=114.0
Q ss_pred CCCCccEEEEeecCCeEEEEeCC-----------C-CeEEEEeC---CCCCC-EEEEeCCCCCceEEEEeCCCCeEEEEE
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQ-----------M-DTISMANL---NDDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSD 105 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~-----------~-~~I~~~~~---~g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d 105 (232)
.+..|.+|++|. .++||+++.. . .+|.+++- +|... ..++.+.+..|.||++.+ ++ ||+++
T Consensus 12 ~~~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV~~ 88 (367)
T TIGR02604 12 LLRNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYVAT 88 (367)
T ss_pred ccCCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEEeC
Confidence 489999999998 5779999842 2 38888753 34432 345556888999999986 66 99987
Q ss_pred cCCCCCcEEEE-eCCCC-----CcEEEEEcC------CCCCcceEEEeCCCCEEEEEECC-------------------C
Q psy5751 106 WNRSGPKIEWS-NLDGT-----DREIFLKAA------DLKLPNSLAVDFRTDELCWVDAD-------------------S 154 (232)
Q Consensus 106 ~~~~~~~I~~~-~~~g~-----~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~-------------------~ 154 (232)
. .+|+++ +.++. ..++++..- ....+++++++++ ++||+++.. .
T Consensus 89 ~----~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpD-G~LYv~~G~~~~~~~~~~~~~~~~~~~~~ 163 (367)
T TIGR02604 89 P----PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPD-GWLYFNHGNTLASKVTRPGTSDESRQGLG 163 (367)
T ss_pred C----CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCC-CCEEEecccCCCceeccCCCccCcccccC
Confidence 3 458876 44442 344555431 0245889999997 899998762 1
Q ss_pred CcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 155 KSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
+.|++++++|+..+.++..+..|.|++++ .+.+|++|.......++++
T Consensus 164 g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~~~~~~i~~ 212 (367)
T TIGR02604 164 GGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDNDDPPLCRVTP 212 (367)
T ss_pred ceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEccCCCceeEEcc
Confidence 57999999999888888899999999996 7899999987766666664
No 22
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.42 E-value=1.9e-09 Score=85.87 Aligned_cols=216 Identities=10% Similarity=0.032 Sum_probs=143.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+..+++++.++.+|.+...++ .|..+++........+.. -..+.++++++.++.++.+......+...+..+......
T Consensus 75 ~~~~~~~~~g~~l~~~~~~~~-~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 75 PELFALHPNGKILYIANEDDN-LVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred ccEEEECCCCCEEEEEcCCCC-eEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 346788888888888876667 899999886442222222 245789999987777776665545566667665433222
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
.. ....|..+++++.++.||++... .+.|...++........+... ....|.++++++++..+|++....+
T Consensus 153 ~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 153 VL-VDQRPRFAEFTADGKELWVSSEI--GGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred EE-cCCCccEEEECCCCCEEEEEcCC--CCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCC
Confidence 22 23467889999866677766432 456888888754322111100 1235778999999888999877777
Q ss_pred cEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEE
Q psy5751 156 SLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGER-APSIALDMMGTTYMYGIAAV 226 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~ 226 (232)
++..++.+..+..........+.++++ ++.+||.+...++.|..++..+.. .+.+.. ...|.+||+-
T Consensus 230 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~~ 299 (300)
T TIGR03866 230 RVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV----GRLPWGVVVR 299 (300)
T ss_pred eEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc----ccccceeEeC
Confidence 899888876554433333446788888 466888888778899999998544 455643 3688999964
No 23
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=99.37 E-value=1.2e-09 Score=88.95 Aligned_cols=222 Identities=20% Similarity=0.197 Sum_probs=142.6
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe------CCCCCccEEEEee---cCCeEEEEeCCC------
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT------TNIRSPEGLTFDW---VNRVLYWTDSQM------ 65 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~------~~~~~p~gl~~d~---~~~~ly~~d~~~------ 65 (232)
.|.+|++.+ +++||++.. .+ +|+++..+|.....+.. .......||++++ .++.||+.-...
T Consensus 3 ~P~~~a~~p-dG~l~v~e~-~G-~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLP-DGRLLVAER-SG-RIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEET-TSCEEEEET-TT-EEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeC-CCcEEEEeC-Cc-eEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 489999999 589999987 55 89999977765222221 2346779999998 358899876632
Q ss_pred --CeEEEEeCCCCC-----CEEEEe---C---CCCCceEEEEeCCCCeEEEEEcC-----------CCCCcEEEEeCCCC
Q psy5751 66 --DTISMANLNDDQ-----PKVIVS---K---DLVNPRGIVVHPYYRKLFWSDWN-----------RSGPKIEWSNLDGT 121 (232)
Q Consensus 66 --~~I~~~~~~g~~-----~~~~~~---~---~~~~p~~iavd~~~~~ly~~d~~-----------~~~~~I~~~~~~g~ 121 (232)
.+|.+..++... .++++. . ......+|+++| +|.||++-.. ...++|.|++.+|+
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgp-DG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~ 158 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGP-DGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS 158 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-T-TSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCC-CCcEEEEeCCCCCcccccccccccceEEEecccCc
Confidence 478887765541 333433 1 334557899998 7899998532 12689999999987
Q ss_pred -------------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCc-------------------
Q psy5751 122 -------------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRV------------------- 166 (232)
Q Consensus 122 -------------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~------------------- 166 (232)
..++.... +.+|.++++|+.++.||.+|.+.. +|.++.. |.+
T Consensus 159 ~p~dnP~~~~~~~~~~i~A~G--lRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~-G~nYGWP~~~~~~~~~~~~~~~ 235 (331)
T PF07995_consen 159 IPADNPFVGDDGADSEIYAYG--LRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEP-GGNYGWPYCEGGPKYSGPPIGD 235 (331)
T ss_dssp B-TTSTTTTSTTSTTTEEEE----SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-T-T-B--TTTBSSSCSTTSS-ECT
T ss_pred CCCCCccccCCCceEEEEEeC--CCccccEEEECCCCcEEEEccCCCCCcEEEEecc-CCcCCCCCCcCCCCCCCCcccc
Confidence 45565555 899999999999899999997653 3444422 110
Q ss_pred ---------eEEEecCCCceEEEEEE--------CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcc-eeEEEEEEc
Q psy5751 167 ---------RRKVYSNCTYPFGLSIT--------DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTT-YMYGIAAVP 227 (232)
Q Consensus 167 ---------~~~~~~~~~~p~gla~~--------~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~-~p~gi~~~~ 227 (232)
.......-..|.|+++. .+.++++++...+|.++..+ +........-..... .|.+|++.+
T Consensus 236 ~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~p 315 (331)
T PF07995_consen 236 APSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGP 315 (331)
T ss_dssp GSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEET
T ss_pred ccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcC
Confidence 00001123558899875 67899999999999999987 322221221123343 789999987
Q ss_pred CC
Q psy5751 228 SS 229 (232)
Q Consensus 228 ~~ 229 (232)
++
T Consensus 316 DG 317 (331)
T PF07995_consen 316 DG 317 (331)
T ss_dssp TS
T ss_pred CC
Confidence 74
No 24
>KOG4499|consensus
Probab=99.35 E-value=3e-10 Score=84.82 Aligned_cols=207 Identities=13% Similarity=0.198 Sum_probs=129.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+|..|+..++.|||.|+..+ .|.|.+.........-.+. ....|+++--.+ -..|.+-.+ .+.-..+.+|......
T Consensus 18 Egp~w~~~~~sLl~VDi~ag-~v~r~D~~qn~v~ra~ie~-p~~ag~ilpv~~~~q~~~v~~G-~kf~i~nwd~~~~~a~ 94 (310)
T KOG4499|consen 18 EGPHWDVERQSLLYVDIEAG-EVHRYDIEQNKVYRAKIEG-PPSAGFILPVEGGPQEFAVGCG-SKFVIVNWDGVSESAK 94 (310)
T ss_pred CCCceEEecceEEEEEeccC-ceehhhhhhhheEEEEEec-CcceeEEEEecCCCceEEEeec-ceEEEEEcccccceee
Confidence 36678999999999999888 7877776654322221111 011223222111 123333222 2444556666543222
Q ss_pred E-eC--------CCCCceEEEEeCCCCeEEEEEcCCC-------CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCC
Q psy5751 82 V-SK--------DLVNPRGIVVHPYYRKLFWSDWNRS-------GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTD 145 (232)
Q Consensus 82 ~-~~--------~~~~p~~iavd~~~~~ly~~d~~~~-------~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~ 145 (232)
+ .+ .-++.++--+|| +|+.|.-.+... .+.+++. +.+...+.+... +.-+|||+.|.+..
T Consensus 95 v~~t~~ev~~d~kknR~NDgkvdP-~Gryy~GtMad~~~~le~~~g~Ly~~-~~~h~v~~i~~~--v~IsNgl~Wd~d~K 170 (310)
T KOG4499|consen 95 VYRTLFEVQPDRKKNRLNDGKVDP-DGRYYGGTMADFGDDLEPIGGELYSW-LAGHQVELIWNC--VGISNGLAWDSDAK 170 (310)
T ss_pred eeeeccccCchHHhcccccCccCC-CCceeeeeeccccccccccccEEEEe-ccCCCceeeehh--ccCCccccccccCc
Confidence 2 11 123455666888 566676433211 2233333 333344444443 78899999999999
Q ss_pred EEEEEECCCCcEEEEecC--CC---ceEEEec-------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751 146 ELCWVDADSKSLECMTIR--NR---VRRKVYS-------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIA 211 (232)
Q Consensus 146 ~Ly~~d~~~~~i~~~~~~--g~---~~~~~~~-------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~ 211 (232)
.+|++|+.+..|...+.| ++ +++.+.. ....|+|++++ +|+||++-|..++|+++++. |+.+.++.
T Consensus 171 ~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eik 250 (310)
T KOG4499|consen 171 KFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIK 250 (310)
T ss_pred EEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEE
Confidence 999999999999666644 33 5555532 34568999997 89999999999999999998 77788888
Q ss_pred eccCC
Q psy5751 212 LDMMG 216 (232)
Q Consensus 212 ~~~~~ 216 (232)
+|...
T Consensus 251 lPt~q 255 (310)
T KOG4499|consen 251 LPTPQ 255 (310)
T ss_pred cCCCc
Confidence 87643
No 25
>KOG1520|consensus
Probab=99.35 E-value=7.5e-11 Score=94.19 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=118.3
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC----CceEEEEeCCCCeEEEEEcCC---------
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV----NPRGIVVHPYYRKLFWSDWNR--------- 108 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~----~p~~iavd~~~~~ly~~d~~~--------- 108 (232)
-...|-||+++..++.||++|.-. -++.++.+|...+.+..+... -.+++.|++ +|.+||||...
T Consensus 113 ~CGRPLGl~f~~~ggdL~VaDAYl-GL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~ 190 (376)
T KOG1520|consen 113 LCGRPLGIRFDKKGGDLYVADAYL-GLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVF 190 (376)
T ss_pred ccCCcceEEeccCCCeEEEEecce-eeEEECCCCCcceeccccccCeeeeecCceeEcC-CCeEEEeccccccchhheEE
Confidence 357999999999888999999775 488899998886555553333 347899998 99999998642
Q ss_pred ------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce---EEEec-CCCceE
Q psy5751 109 ------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR---RKVYS-NCTYPF 178 (232)
Q Consensus 109 ------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~---~~~~~-~~~~p~ 178 (232)
..+++++++......++++.. +..|||++++++...+.+|+....+|.+.-+.|.+. +.+++ ....|+
T Consensus 191 a~l~g~~~GRl~~YD~~tK~~~VLld~--L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PD 268 (376)
T KOG1520|consen 191 AALEGDPTGRLFRYDPSTKVTKVLLDG--LYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPD 268 (376)
T ss_pred eeecCCCccceEEecCcccchhhhhhc--ccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCc
Confidence 356777777777777777776 999999999999999999999999999999998766 77777 456699
Q ss_pred EEEEE-CCEEEEEe
Q psy5751 179 GLSIT-DEKYYWTD 191 (232)
Q Consensus 179 gla~~-~~~ly~td 191 (232)
.|..+ +|..|++-
T Consensus 269 NIR~~~~G~fWVal 282 (376)
T KOG1520|consen 269 NIRRDSTGHFWVAL 282 (376)
T ss_pred ceeECCCCCEEEEE
Confidence 99987 66777775
No 26
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=99.32 E-value=9.6e-10 Score=84.01 Aligned_cols=205 Identities=13% Similarity=0.108 Sum_probs=144.6
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe---CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT---TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~---~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
.|++|...+ ++..+++|.... |.|++.+....++.-. ....+-+...+|. .++|+|+... +.--+.|.-...
T Consensus 105 ~Phgiv~gp-dg~~Witd~~~a--I~R~dpkt~evt~f~lp~~~a~~nlet~vfD~-~G~lWFt~q~-G~yGrLdPa~~~ 179 (353)
T COG4257 105 SPHGIVVGP-DGSAWITDTGLA--IGRLDPKTLEVTRFPLPLEHADANLETAVFDP-WGNLWFTGQI-GAYGRLDPARNV 179 (353)
T ss_pred CCceEEECC-CCCeeEecCcce--eEEecCcccceEEeecccccCCCcccceeeCC-CccEEEeecc-ccceecCcccCc
Confidence 478899998 888888887654 8888876554433322 2234556778898 6778888764 333466666555
Q ss_pred CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-CCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 78 PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-LKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 78 ~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
.++.-......|.||++.| +|.+|++... ..-|.+++.-....+++..... -..-..+..|+. ++++.+++++++
T Consensus 180 i~vfpaPqG~gpyGi~atp-dGsvwyasla--gnaiaridp~~~~aev~p~P~~~~~gsRriwsdpi-g~~wittwg~g~ 255 (353)
T COG4257 180 ISVFPAPQGGGPYGICATP-DGSVWYASLA--GNAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPI-GRAWITTWGTGS 255 (353)
T ss_pred eeeeccCCCCCCcceEECC-CCcEEEEecc--ccceEEcccccCCcceecCCCcccccccccccCcc-CcEEEeccCCce
Confidence 5555556777899999998 8999999765 3447777765555555433221 122345677776 899999999999
Q ss_pred EEEEecCCCceEEE-e-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEecc
Q psy5751 157 LECMTIRNRVRRKV-Y-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDM 214 (232)
Q Consensus 157 i~~~~~~g~~~~~~-~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~ 214 (232)
++++++....-... + ..-.+|.++-+| .+++|.+|+..+.|.|+++.....+++..+.
T Consensus 256 l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~sea~agai~rfdpeta~ftv~p~pr 316 (353)
T COG4257 256 LHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETARFTVLPIPR 316 (353)
T ss_pred eeEeCcccccceeeeCCCCCCCcceeeeccCCcEEeeccccCceeecCcccceEEEecCCC
Confidence 99999986542222 2 245678899997 7999999999999999999988777665443
No 27
>KOG1520|consensus
Probab=99.28 E-value=1.9e-10 Score=91.90 Aligned_cols=179 Identities=17% Similarity=0.121 Sum_probs=130.0
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC----CCE----EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEE
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD----QPK----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIE 114 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~----~~~----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~ 114 (232)
...+..+.+.. ++.|+|+-...+.+-+++..-. .+. .-...--.+|-||+.+..+|.||++|...+ ++
T Consensus 64 ~~~gp~~~v~d-g~il~~~g~~~Gwv~~~~~~~s~~~~~~~~~~~~~~e~~CGRPLGl~f~~~ggdL~VaDAYlG---L~ 139 (376)
T KOG1520|consen 64 QGGGPYTGVVD-GRILKYTGNDDGWVKFADTKDSTNRSQCCDPGSFETEPLCGRPLGIRFDKKGGDLYVADAYLG---LL 139 (376)
T ss_pred cCCCceEEEEC-CceEEEeccCceEEEEEeccccccccccCCCcceecccccCCcceEEeccCCCeEEEEeccee---eE
Confidence 33444455543 6788999888888887776311 111 111123469999999998889999998754 88
Q ss_pred EEeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEECC-----------------CCcEEEEecCCCceEEEecCC
Q psy5751 115 WSNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDAD-----------------SKSLECMTIRNRVRRKVYSNC 174 (232)
Q Consensus 115 ~~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~-----------------~~~i~~~~~~g~~~~~~~~~~ 174 (232)
.++.+|...+.+.... .+...|++.|++ ++.+||+|+. ++++.+.|+.....+++.+++
T Consensus 140 ~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~a~l~g~~~GRl~~YD~~tK~~~VLld~L 218 (376)
T KOG1520|consen 140 KVGPEGGLAELLADEAEGKPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVFAALEGDPTGRLFRYDPSTKVTKVLLDGL 218 (376)
T ss_pred EECCCCCcceeccccccCeeeeecCceeEcC-CCeEEEeccccccchhheEEeeecCCCccceEEecCcccchhhhhhcc
Confidence 9999988876665543 245679999999 7999999874 578888888887788889999
Q ss_pred CceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCCcceEEeccC-CcceeEEEEEE
Q psy5751 175 TYPFGLSI--TDEKYYWTDWKTNRIESANKEGERAPSIALDMM-GTTYMYGIAAV 226 (232)
Q Consensus 175 ~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~-~~~~p~gi~~~ 226 (232)
.-|+|+++ +++.+.+++....++.+.-..|...-+...-.. -|+.|..|--.
T Consensus 219 ~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~ 273 (376)
T KOG1520|consen 219 YFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRD 273 (376)
T ss_pred cccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeEC
Confidence 99999998 688999999999888888777665522222222 36667666544
No 28
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.27 E-value=4.7e-08 Score=77.82 Aligned_cols=196 Identities=13% Similarity=0.163 Sum_probs=129.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.++++++..+.+|.+...++ .|..+++.+......+.. ...+..+++++.++.+|.+....+.|...++........
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~ 110 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSD-TIQVIDLATGEVIGTLPS-GPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAE 110 (300)
T ss_pred CCceEECCCCCEEEEEECCCC-eEEEEECCCCcEEEeccC-CCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeE
Confidence 456888887778888887777 899999886543332322 245778899988888998877778899999976443222
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
+. ....|.+++++|.+..++.+... ...+...+............ -..|..+++++++..||++....+.|..++
T Consensus 111 ~~-~~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d 185 (300)
T TIGR03866 111 IP-VGVEPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYEIVDNVLV--DQRPRFAEFTADGKELWVSSEIGGTVSVID 185 (300)
T ss_pred ee-CCCCcceEEECCCCCEEEEEecC--CCeEEEEeCCCCeEEEEEEc--CCCccEEEECCCCCEEEEEcCCCCEEEEEE
Confidence 22 23468899999855555555432 22345556554333222222 346889999999888888766678899988
Q ss_pred cCCCce-EEEe-c------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751 162 IRNRVR-RKVY-S------NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 162 ~~g~~~-~~~~-~------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g 204 (232)
++..+. +.+. . ....|.++++. +..+|++...++++..++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~ 238 (300)
T TIGR03866 186 VATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT 238 (300)
T ss_pred cCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 886543 2221 1 12246677774 557788877777888888764
No 29
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.26 E-value=3.8e-08 Score=77.77 Aligned_cols=204 Identities=16% Similarity=0.152 Sum_probs=140.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCcee--EEEe-CC--------CCCccEEEEeecCCeEEEEeCCCCeE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVE--DVIT-TN--------IRSPEGLTFDWVNRVLYWTDSQMDTI 68 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~--~~~~-~~--------~~~p~gl~~d~~~~~ly~~d~~~~~I 68 (232)
|.-+++|...+.||.++...+ .|.+..++ |.-.. .++. .+ -.++....+++.++.|+..|-+..+|
T Consensus 91 p~yvsvd~~g~~vf~AnY~~g-~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 91 PCYVSVDEDGRFVFVANYHSG-SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred CeEEEECCCCCEEEEEEccCc-eEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 357889998889999999988 88887775 32211 1111 11 12367778899899999999999999
Q ss_pred EEEeCCCCCCEEEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEc----CCC---CCcc
Q psy5751 69 SMANLNDDQPKVIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKA----ADL---KLPN 136 (232)
Q Consensus 69 ~~~~~~g~~~~~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~----~~~---~~p~ 136 (232)
+.++++........ -.....|+-|+++|..+..|+..-- .+.|.....+.. ..+.+... .++ .+-.
T Consensus 170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL--~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~a 247 (346)
T COG2706 170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNEL--NSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAA 247 (346)
T ss_pred EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEecc--CCEEEEEEEcCCCceEEEeeeeccCccccCCCCcee
Confidence 99988744321111 1567789999999988888876532 456777777663 22222111 012 3446
Q ss_pred eEEEeCCCCEEEEEECCCCcEEEEecC--CCceEEEe---cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 137 SLAVDFRTDELCWVDADSKSLECMTIR--NRVRRKVY---SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~~~~i~~~~~~--g~~~~~~~---~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
.|.+++++..||.++.+.+.|..+.++ |+..+.+. ...+.|..+.+. ++.|+.++-.+..|.++..+.+..+
T Consensus 248 aIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~ 326 (346)
T COG2706 248 AIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGR 326 (346)
T ss_pred EEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCce
Confidence 889999999999999998877776555 55444442 255668888874 7889999888887777777644444
No 30
>KOG4659|consensus
Probab=99.24 E-value=2.9e-10 Score=101.69 Aligned_cols=190 Identities=21% Similarity=0.289 Sum_probs=132.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEc-CCC----ceeEEEe--------------------CCCCCccEEEEeecCCe
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHL-DGK----NVEDVIT--------------------TNIRSPEGLTFDWVNRV 57 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~-~g~----~~~~~~~--------------------~~~~~p~gl~~d~~~~~ 57 (232)
.-+++++.++.||++|-..+ +|+|+.- .+. +.+.+.. ..+..|.||++|. .++
T Consensus 410 Yy~AvsPvdgtlyvSdp~s~-qv~rv~sl~~~d~~~N~evvaG~Ge~Clp~desCGDGalA~dA~L~~PkGIa~dk-~g~ 487 (1899)
T KOG4659|consen 410 YYIAVSPVDGTLYVSDPLSK-QVWRVSSLEPQDSRNNYEVVAGDGEVCLPADESCGDGALAQDAQLIFPKGIAFDK-MGN 487 (1899)
T ss_pred eEEEecCcCceEEecCCCcc-eEEEeccCCccccccCeeEEeccCcCccccccccCcchhcccceeccCCceeEcc-CCc
Confidence 35889999999999999999 8888652 221 1222211 1256899999998 688
Q ss_pred EEEEeCCCCeEEEEeCCCCCCEEEEe------------------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 58 LYWTDSQMDTISMANLNDDQPKVIVS------------------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 58 ly~~d~~~~~I~~~~~~g~~~~~~~~------------------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
|||+|.. +|.++|.+|-....+-+ -.+..|.++|++|.++.||+.| .+.|.++..+
T Consensus 488 lYfaD~t--~IR~iD~~giIstlig~~~~~~~p~~C~~~~kl~~~~leWPT~LaV~Pmdnsl~Vld----~nvvlrit~~ 561 (1899)
T KOG4659|consen 488 LYFADGT--RIRVIDTTGIISTLIGTTPDQHPPRTCAQITKLVDLQLEWPTSLAVDPMDNSLLVLD----TNVVLRITVV 561 (1899)
T ss_pred EEEeccc--EEEEeccCceEEEeccCCCCccCccccccccchhheeeecccceeecCCCCeEEEee----cceEEEEccC
Confidence 9999986 68888877643222211 1477899999999999999999 4457787776
Q ss_pred CCCcEEEEEcC-------------------CCCCcceEEEeCCCCEEEEEECCCCcEEE---EecCCCceEEEe------
Q psy5751 120 GTDREIFLKAA-------------------DLKLPNSLAVDFRTDELCWVDADSKSLEC---MTIRNRVRRKVY------ 171 (232)
Q Consensus 120 g~~~~~~~~~~-------------------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~---~~~~g~~~~~~~------ 171 (232)
+..+ ++...+ .+..+.+|++.++ |.||++++...+|-+ +..||. .-.++
T Consensus 562 ~rV~-Ii~GrP~hC~~a~~t~~~skla~H~tl~~~r~Iavg~~-G~lyvaEsD~rriNrvr~~~tdg~-i~ilaGa~S~C 638 (1899)
T KOG4659|consen 562 HRVR-IILGRPTHCDLANATSSASKLADHRTLLIQRDIAVGTD-GALYVAESDGRRINRVRKLSTDGT-ISILAGAKSPC 638 (1899)
T ss_pred ccEE-EEcCCccccccCCCchhhhhhhhhhhhhhhhceeecCC-ceEEEEeccchhhhheEEeccCce-EEEecCCCCCC
Confidence 5543 111111 1445789999997 999999987654444 434431 11111
Q ss_pred --------------------cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 172 --------------------SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 172 --------------------~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..+..|.++|+. ++.+|++|.++-+|..+...
T Consensus 639 ~C~~~~~cdcfs~~~~~At~A~lnsp~alaVsPdg~v~IAD~gN~rIr~Vs~~ 691 (1899)
T KOG4659|consen 639 SCDVAACCDCFSLRDVAATQAKLNSPYALAVSPDGDVIIADSGNSRIRKVSAR 691 (1899)
T ss_pred CcccccCCccccccchhhhccccCCcceEEECCCCcEEEecCCchhhhhhhhc
Confidence 136779999995 89999999999888777643
No 31
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.2e-07 Score=74.95 Aligned_cols=225 Identities=11% Similarity=0.093 Sum_probs=145.6
Q ss_pred CeEEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCC--ceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC--
Q psy5751 1 MLIGITVDCVEGQVYYSSVADK-SSIKRAHLDGK--NVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL-- 73 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~--~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~-- 73 (232)
+|.-+++++....||..+..++ +.|..+.++.. ..+.+-. ..-..|.-+++|+.++.||.+.+..+.|.+..+
T Consensus 41 nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~ 120 (346)
T COG2706 41 NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQA 120 (346)
T ss_pred CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEccc
Confidence 4677899998899999987732 37887777753 3322221 123566899999999999999999998888765
Q ss_pred CCCCCEE--EEe--CC-------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE--EcCCCCCcceEEE
Q psy5751 74 NDDQPKV--IVS--KD-------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL--KAADLKLPNSLAV 140 (232)
Q Consensus 74 ~g~~~~~--~~~--~~-------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~--~~~~~~~p~~l~~ 140 (232)
+|....+ ++. .. -.++...-++|.++.|+.+|.+.+ +|..++++-...+... .-.....|..|+|
T Consensus 121 dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D--ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~F 198 (346)
T COG2706 121 DGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD--RIFLYDLDDGKLTPADPAEVKPGAGPRHIVF 198 (346)
T ss_pred CCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc--eEEEEEcccCccccccccccCCCCCcceEEE
Confidence 4543222 221 11 122556678888889999999855 5776666533222111 1122678999999
Q ss_pred eCCCCEEEEEECCCCcEEEEecCCC--ceEEEec------CCCceE---EEEE--ECCEEEEEeCCCCcEEEE--eCCCC
Q psy5751 141 DFRTDELCWVDADSKSLECMTIRNR--VRRKVYS------NCTYPF---GLSI--TDEKYYWTDWKTNRIESA--NKEGE 205 (232)
Q Consensus 141 d~~~~~Ly~~d~~~~~i~~~~~~g~--~~~~~~~------~~~~p~---gla~--~~~~ly~td~~~~~i~~~--~~~g~ 205 (232)
++..+..|+...-+++|....+++. +.+.+.. .+.... .|.+ ++.+||.++-+.+.|..+ +++|+
T Consensus 199 Hpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g 278 (346)
T COG2706 199 HPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGG 278 (346)
T ss_pred cCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCC
Confidence 9999999999998999999988863 3333322 222222 2333 477899999887766555 45566
Q ss_pred CcceEEeccCCcceeEEEEEEc
Q psy5751 206 RAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 206 ~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
.+..+....-.-..|.+-.+.+
T Consensus 279 ~L~~~~~~~teg~~PR~F~i~~ 300 (346)
T COG2706 279 KLELVGITPTEGQFPRDFNINP 300 (346)
T ss_pred EEEEEEEeccCCcCCccceeCC
Confidence 6665544333333455544433
No 32
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=99.17 E-value=9.8e-08 Score=76.01 Aligned_cols=188 Identities=14% Similarity=0.134 Sum_probs=124.2
Q ss_pred eEEEEEeCCCCEEEEEEcCC---------C--CcEEEEEcCCCceeEEE-e-C----CCCCccEEEEeecC-----CeEE
Q psy5751 2 LIGITVDCVEGQVYYSSVAD---------K--SSIKRAHLDGKNVEDVI-T-T----NIRSPEGLTFDWVN-----RVLY 59 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~---------~--~~i~~~~~~g~~~~~~~-~-~----~~~~p~gl~~d~~~-----~~ly 59 (232)
+.++.+|. .++||+.|.+. . ++|..+++.....-+.+ . . .......+++|... +.+|
T Consensus 3 V~~v~iD~-~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aY 81 (287)
T PF03022_consen 3 VQRVQIDE-CGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAY 81 (287)
T ss_dssp EEEEEE-T-TSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEE
T ss_pred ccEEEEcC-CCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEE
Confidence 57889997 99999999763 1 48999999976542222 1 1 22455779999744 5899
Q ss_pred EEeCCCCeEEEEeCCCCCCEEEEe-C------------------CCCCceEEEEeC---CCCeEEEEEcCCCCCcEEEEe
Q psy5751 60 WTDSQMDTISMANLNDDQPKVIVS-K------------------DLVNPRGIVVHP---YYRKLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 60 ~~d~~~~~I~~~~~~g~~~~~~~~-~------------------~~~~p~~iavd~---~~~~ly~~d~~~~~~~I~~~~ 117 (232)
++|.....|.++|+.......+.. . ......|+++.+ .++.|||.... ..+++++.
T Consensus 82 ItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~ls--s~~ly~v~ 159 (287)
T PF03022_consen 82 ITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLS--SRKLYRVP 159 (287)
T ss_dssp EEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT---SEEEEEE
T ss_pred EeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCC--CCcEEEEE
Confidence 999999999999987754332222 1 122356788866 45689999876 34677776
Q ss_pred C----CCC---------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC----CceEEEec--C-CCce
Q psy5751 118 L----DGT---------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN----RVRRKVYS--N-CTYP 177 (232)
Q Consensus 118 ~----~g~---------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g----~~~~~~~~--~-~~~p 177 (232)
. +.. ..+.+... ..+..|+++|+ +|.||+++...+.|.+.+.++ .+.+++++ . +.+|
T Consensus 160 T~~L~~~~~~~~~~~~~~v~~lG~k--~~~s~g~~~D~-~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~p 236 (287)
T PF03022_consen 160 TSVLRDPSLSDAQALASQVQDLGDK--GSQSDGMAIDP-NGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWP 236 (287)
T ss_dssp HHHHCSTT--HHH-HHHT-EEEEE-----SECEEEEET-TTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSE
T ss_pred HHHhhCccccccccccccceecccc--CCCCceEEECC-CCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeecc
Confidence 3 111 12333222 34678999999 599999999999999999998 45556654 4 8899
Q ss_pred EEEEEEC---CEEEEEeCCCC
Q psy5751 178 FGLSITD---EKYYWTDWKTN 195 (232)
Q Consensus 178 ~gla~~~---~~ly~td~~~~ 195 (232)
.+++++. +.||+...+-.
T Consensus 237 d~~~i~~~~~g~L~v~snrl~ 257 (287)
T PF03022_consen 237 DGLKIDPEGDGYLWVLSNRLQ 257 (287)
T ss_dssp EEEEE-T--TS-EEEEE-S--
T ss_pred ceeeeccccCceEEEEECcch
Confidence 9999976 99999875433
No 33
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.15 E-value=9.7e-08 Score=77.56 Aligned_cols=198 Identities=12% Similarity=0.118 Sum_probs=120.0
Q ss_pred eEEEEEeCCCCEEEEEEcC-CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVA-DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~-~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|..+++++.+.+||++|.. .. .+.++++.....-..+... ..+..+.....+..+.|.| ++...+.++......
T Consensus 107 ~~~~~ls~dgk~l~V~n~~p~~-~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~~~~~~~D---g~~~~v~~d~~g~~~ 181 (352)
T TIGR02658 107 PWMTSLTPDNKTLLFYQFSPSP-AVGVVDLEGKAFVRMMDVP-DCYHIFPTANDTFFMHCRD---GSLAKVGYGTKGNPK 181 (352)
T ss_pred cceEEECCCCCEEEEecCCCCC-EEEEEECCCCcEEEEEeCC-CCcEEEEecCCccEEEeec---CceEEEEecCCCceE
Confidence 4478999988999999988 66 8999999976643333221 1222223333233333333 233333332222111
Q ss_pred EEeCC---------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-----cC---CCCCcce---EEE
Q psy5751 81 IVSKD---------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-----AA---DLKLPNS---LAV 140 (232)
Q Consensus 81 ~~~~~---------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-----~~---~~~~p~~---l~~ 140 (232)
..+.. +.+| .+.+.+|..+|.... +.|+.+++.+........ .. .-..|.| +++
T Consensus 182 ~~~~~vf~~~~~~v~~rP---~~~~~dg~~~~vs~e---G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~ 255 (352)
T TIGR02658 182 IKPTEVFHPEDEYLINHP---AYSNKSGRLVWPTYT---GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAY 255 (352)
T ss_pred EeeeeeecCCccccccCC---ceEcCCCcEEEEecC---CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEE
Confidence 11111 2455 334424445554432 679999876654332211 10 1235666 999
Q ss_pred eCCCCEEEEEEC---------CCCcEEEEecCCCceEEEecCCCceEEEEE--ECC-EEEEEeCCCCcEEEEeCC-CCCc
Q psy5751 141 DFRTDELCWVDA---------DSKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDE-KYYWTDWKTNRIESANKE-GERA 207 (232)
Q Consensus 141 d~~~~~Ly~~d~---------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~-~ly~td~~~~~i~~~~~~-g~~~ 207 (232)
++++++||++.. ..++|+.+|....++..-..-...|+++++ ++. +||+++..++.|..++.. ++..
T Consensus 256 ~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i 335 (352)
T TIGR02658 256 HRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL 335 (352)
T ss_pred cCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence 999999999642 236899999887766554555678999998 467 899999999999999976 4455
Q ss_pred ceE
Q psy5751 208 PSI 210 (232)
Q Consensus 208 ~~i 210 (232)
+.+
T Consensus 336 ~~i 338 (352)
T TIGR02658 336 SSV 338 (352)
T ss_pred eee
Confidence 555
No 34
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.14 E-value=8.1e-08 Score=81.44 Aligned_cols=204 Identities=10% Similarity=0.034 Sum_probs=133.4
Q ss_pred EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~ 80 (232)
+..|++..++|+|+...++ +.|+.+++.+...+.+... -......++.+.++.|+++.... ..|+++++++...+.
T Consensus 222 ~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~-~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~ 300 (448)
T PRK04792 222 SPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSF-PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR 300 (448)
T ss_pred CceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCC-CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE
Confidence 4678888888888755433 4799999987665444321 12234577888888888764333 469999998876655
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~ 158 (232)
+.. ........+.+|.++.|+++....+..+|+++++++...+.+... .....+.+++++++.||++.... .+|+
T Consensus 301 lt~-~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~--g~~~~~~~~SpDG~~l~~~~~~~g~~~I~ 377 (448)
T PRK04792 301 ITR-HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFE--GEQNLGGSITPDGRSMIMVNRTNGKFNIA 377 (448)
T ss_pred Ccc-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecC--CCCCcCeeECCCCCEEEEEEecCCceEEE
Confidence 543 223345667888778888876544467899999987765554332 22334568999989999986543 3789
Q ss_pred EEecCCCceEEEecC-C-CceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceEEe
Q psy5751 159 CMTIRNRVRRKVYSN-C-TYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSIAL 212 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~-~-~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~ 212 (232)
.++++++..+.+... . ..| ..+-++..|+++.... ..++.++.+|...+.+..
T Consensus 378 ~~dl~~g~~~~lt~~~~d~~p-s~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~~ 434 (448)
T PRK04792 378 RQDLETGAMQVLTSTRLDESP-SVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARLPA 434 (448)
T ss_pred EEECCCCCeEEccCCCCCCCc-eECCCCCEEEEEEecCCceEEEEEECCCCceEECcC
Confidence 999998776655432 1 122 2333566777764433 347888888877665543
No 35
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=99.08 E-value=3.1e-07 Score=71.17 Aligned_cols=184 Identities=16% Similarity=0.076 Sum_probs=114.3
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC--C
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD--G 120 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~--g 120 (232)
...+.||++++.++.||.+......|+..+++|...+.+--....++.|+++-- ++.+..++-. .++++.+..+ +
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g-~~~~vl~~Er--~~~L~~~~~~~~~ 97 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLG-NGRYVLSEER--DQRLYIFTIDDDT 97 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-S-TTEEEEEETT--TTEEEEEEE----
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEEC-CCEEEEEEcC--CCcEEEEEEeccc
Confidence 356999999998999999888889999999998776655445788999999973 5655555532 4567776663 2
Q ss_pred CCcEE-----EEEcC---CCCCcceEEEeCCCCEEEEEECCCC-cEEEEec--CCCceEEEec--------CCCceEEEE
Q psy5751 121 TDREI-----FLKAA---DLKLPNSLAVDFRTDELCWVDADSK-SLECMTI--RNRVRRKVYS--------NCTYPFGLS 181 (232)
Q Consensus 121 ~~~~~-----~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~~~~--~g~~~~~~~~--------~~~~p~gla 181 (232)
..... +-... .-...-||+.|+.+++||++..... .|+.++. .+........ ....|.+++
T Consensus 98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~ 177 (248)
T PF06977_consen 98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLS 177 (248)
T ss_dssp TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEE
T ss_pred cccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceE
Confidence 22111 11110 0123469999999999999976655 5777776 2222222211 345688999
Q ss_pred EE--CCEEEEEeCCCCcEEEEeCCCCCcceEEecc------CCcceeEEEEEEcCC
Q psy5751 182 IT--DEKYYWTDWKTNRIESANKEGERAPSIALDM------MGTTYMYGIAAVPSS 229 (232)
Q Consensus 182 ~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~------~~~~~p~gi~~~~~~ 229 (232)
++ .+.||+....+++|..++.+|.....+.+.. .....|=|||+.+++
T Consensus 178 ~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G 233 (248)
T PF06977_consen 178 YDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDG 233 (248)
T ss_dssp EETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT-
T ss_pred EcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCC
Confidence 97 6799999999999999999999888777654 224579999998764
No 36
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.05 E-value=2.6e-07 Score=71.60 Aligned_cols=197 Identities=13% Similarity=0.127 Sum_probs=136.4
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC----
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP---- 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---- 78 (232)
.+++|+++++.||.+--... .|..+.++|.-..++-...+..|++|++-. ++..-++|....+++...++-...
T Consensus 89 S~LTynp~~rtLFav~n~p~-~iVElt~~GdlirtiPL~g~~DpE~Ieyig-~n~fvi~dER~~~l~~~~vd~~t~~~~~ 166 (316)
T COG3204 89 SSLTYNPDTRTLFAVTNKPA-AIVELTKEGDLIRTIPLTGFSDPETIEYIG-GNQFVIVDERDRALYLFTVDADTTVISA 166 (316)
T ss_pred cceeeCCCcceEEEecCCCc-eEEEEecCCceEEEecccccCChhHeEEec-CCEEEEEehhcceEEEEEEcCCccEEec
Confidence 58999999999997643434 899999999877777777889999999885 333334777777877765544321
Q ss_pred ---EEEEe---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-------CCCCcceEEEeCCCC
Q psy5751 79 ---KVIVS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-------DLKLPNSLAVDFRTD 145 (232)
Q Consensus 79 ---~~~~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-------~~~~p~~l~~d~~~~ 145 (232)
+.-+. .....-.|+|.|+.++.||++--. .+-.|+...........-.... .+..-+|+.+|+.++
T Consensus 167 ~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr-~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~ 245 (316)
T COG3204 167 KVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKER-NPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITN 245 (316)
T ss_pred cceEEeccccCCCCcCceeeecCCCCceEEEEEcc-CCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCC
Confidence 11122 123455799999999999988644 3456776664432222111110 134568999999999
Q ss_pred EEEEEECCCCcEEEEecCCCceEEE-e--------cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 146 ELCWVDADSKSLECMTIRNRVRRKV-Y--------SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 146 ~Ly~~d~~~~~i~~~~~~g~~~~~~-~--------~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.|++-....+.+..++.+|.-+..+ + +..+.+.|+|++ +|.||++--- +..+++.++
T Consensus 246 ~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvSEP-nlfy~F~~~ 312 (316)
T COG3204 246 SLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVSEP-NLFYRFTPQ 312 (316)
T ss_pred cEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEecC-CcceecccC
Confidence 9999888888899999998754433 2 146778999996 8899988653 456777776
No 37
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=99.04 E-value=2e-08 Score=81.72 Aligned_cols=156 Identities=13% Similarity=0.126 Sum_probs=105.8
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe------CCCCCceEEEEeC---CCCeEEEEEcCC-----
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS------KDLVNPRGIVVHP---YYRKLFWSDWNR----- 108 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~p~~iavd~---~~~~ly~~d~~~----- 108 (232)
++.|.+|++.+. +.+|+++. .++|++++.+|.....+.. .....+.++|++| .++.||++....
T Consensus 1 L~~P~~~a~~pd-G~l~v~e~-~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 1 LNNPRSMAFLPD-GRLLVAER-SGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp ESSEEEEEEETT-SCEEEEET-TTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred CCCceEEEEeCC-CcEEEEeC-CceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 368999999995 78999998 7999999977776333332 2344668999998 358999876521
Q ss_pred -CCCcEEEEeCCCC-----CcEEEEEc-C----CCCCcceEEEeCCCCEEEEEEC-------------CCCcEEEEecCC
Q psy5751 109 -SGPKIEWSNLDGT-----DREIFLKA-A----DLKLPNSLAVDFRTDELCWVDA-------------DSKSLECMTIRN 164 (232)
Q Consensus 109 -~~~~I~~~~~~g~-----~~~~~~~~-~----~~~~p~~l~~d~~~~~Ly~~d~-------------~~~~i~~~~~~g 164 (232)
...+|.|..++.. ..++++.. . ..+.-..|+|+++ ++||++-. ..++|.|++.+|
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpD-G~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG 157 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPD-GKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDG 157 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TT-SEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTS
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCC-CcEEEEeCCCCCcccccccccccceEEEecccC
Confidence 1246787777654 12333322 1 1345568999997 69999932 257899999998
Q ss_pred C-------------ceEEEecCCCceEEEEEE-C-CEEEEEeCCCC---cEEEEe
Q psy5751 165 R-------------VRRKVYSNCTYPFGLSIT-D-EKYYWTDWKTN---RIESAN 201 (232)
Q Consensus 165 ~-------------~~~~~~~~~~~p~gla~~-~-~~ly~td~~~~---~i~~~~ 201 (232)
. ..++++..+..|.+++++ . +.||.+|.+.. +|.++.
T Consensus 158 ~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~ 212 (331)
T PF07995_consen 158 SIPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIE 212 (331)
T ss_dssp SB-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-
T ss_pred cCCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEec
Confidence 6 567778899999999998 4 89999997654 444444
No 38
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.02 E-value=9.8e-07 Score=74.73 Aligned_cols=204 Identities=12% Similarity=0.062 Sum_probs=133.5
Q ss_pred EEEEEeCCCCEEEEEEcCC-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVAD-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~ 79 (232)
....|.+..+.|+++.... .+.|+..++.+...+.+... .....+.++.+.++.|+++-.. +..|+.+++++....
T Consensus 205 ~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~-~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~ 283 (435)
T PRK05137 205 LTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNF-PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT 283 (435)
T ss_pred EeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecC-CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE
Confidence 4577888888887765433 24899999987665444322 1233566788878888776443 356999999887765
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSL 157 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i 157 (232)
.+.. ........+.+|..+.|+++....+..+|+++++++...+.+.... ..-....++++++.|+++.... .+|
T Consensus 284 ~Lt~-~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~--~~~~~~~~SpdG~~ia~~~~~~~~~~i 360 (435)
T PRK05137 284 RLTD-SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGG--GRYSTPVWSPRGDLIAFTKQGGGQFSI 360 (435)
T ss_pred EccC-CCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCC--CcccCeEECCCCCEEEEEEcCCCceEE
Confidence 5543 2223345678887777877654434568999999988776665432 2234577899989998876433 478
Q ss_pred EEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC-----CcEEEEeCCCCCcceEE
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT-----NRIESANKEGERAPSIA 211 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~-----~~i~~~~~~g~~~~~i~ 211 (232)
+.++++++..+.+.... .....++ ++..|+++-... ..++.++.+|...+.+.
T Consensus 361 ~~~d~~~~~~~~lt~~~-~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~~l~ 420 (435)
T PRK05137 361 GVMKPDGSGERILTSGF-LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNEREVP 420 (435)
T ss_pred EEEECCCCceEeccCCC-CCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceEEcc
Confidence 99999887665553321 2334455 456777764322 36899999887766554
No 39
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.00 E-value=6.6e-07 Score=75.69 Aligned_cols=203 Identities=13% Similarity=0.078 Sum_probs=131.4
Q ss_pred EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~ 80 (232)
+..|.+.++.|+++....+ +.|+++++++...+.+.... .....+++.+.++.|+++-.. +..|+++++++...+.
T Consensus 208 ~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~-g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~ 286 (433)
T PRK04922 208 SPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR-GINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR 286 (433)
T ss_pred cccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC-CCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE
Confidence 4567887888888765433 47999999876654443221 223456788878888776433 3479999998876555
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~ 158 (232)
+.. ........+.+|.++.|+++....+..+|+.+++++...+.+... .......+++++++.|+++.... .+|+
T Consensus 287 lt~-~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~--g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~ 363 (433)
T PRK04922 287 LTN-HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQ--GNYNARASVSPDGKKIAMVHGSGGQYRIA 363 (433)
T ss_pred Ccc-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecC--CCCccCEEECCCCCEEEEEECCCCceeEE
Confidence 443 222334577888777788775433356799999987765554432 23345689999999999886433 3689
Q ss_pred EEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEE
Q psy5751 159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIA 211 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~ 211 (232)
.++++++..+.+... ......++ ++..|+++.. +...|+.++.+|...+.+.
T Consensus 364 v~d~~~g~~~~Lt~~-~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~ 419 (433)
T PRK04922 364 VMDLSTGSVRTLTPG-SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRLV 419 (433)
T ss_pred EEECCCCCeEECCCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEcc
Confidence 999987766644332 12223345 4556666533 3457889999887766554
No 40
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.98 E-value=1.7e-06 Score=73.05 Aligned_cols=204 Identities=11% Similarity=0.036 Sum_probs=129.7
Q ss_pred EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~ 80 (232)
+..|.+..+.|+++...++ +.|+..++++.....+.... ......++.+.++.|+++-.. ...|+.+++++...+.
T Consensus 200 ~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~-g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~ 278 (427)
T PRK02889 200 SPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFK-GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRR 278 (427)
T ss_pred cceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCC-CCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEE
Confidence 5678888888877765433 47999999876654443221 234567888888888876433 3579999998876655
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~ 158 (232)
+.. ........+.+|.+..|+++....+..+|+.+++++...+.+... .......+++++++.|+++.... .+|+
T Consensus 279 lt~-~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~--g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~ 355 (427)
T PRK02889 279 LTQ-SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFT--GSYNTSPRISPDGKLLAYISRVGGAFKLY 355 (427)
T ss_pred CCC-CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecC--CCCcCceEECCCCCEEEEEEccCCcEEEE
Confidence 543 222234567888777787765433456899999887765554432 22233568899988998876543 3789
Q ss_pred EEecCCCceEEEecCCCceEEEEE--ECCEEEEEe-CC-CCcEEEEeCCCCCcceEEe
Q psy5751 159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTD-WK-TNRIESANKEGERAPSIAL 212 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td-~~-~~~i~~~~~~g~~~~~i~~ 212 (232)
.++++++..+.+.+. ......++ ++..|+++- .+ ...++.++.+|...+.+..
T Consensus 356 v~d~~~g~~~~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~~ 412 (427)
T PRK02889 356 VQDLATGQVTALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQRLSV 412 (427)
T ss_pred EEECCCCCeEEccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEEeec
Confidence 999987766655432 11233345 455666653 32 2357788888776665543
No 41
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.97 E-value=1.5e-06 Score=73.40 Aligned_cols=204 Identities=12% Similarity=0.057 Sum_probs=131.5
Q ss_pred EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~ 79 (232)
....|++..+.|+++...++ +.|+++++++...+.+.... ......++.+.++.|+++-.. ...|+++++++...+
T Consensus 202 ~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~-g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~ 280 (430)
T PRK00178 202 LSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFE-GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS 280 (430)
T ss_pred eeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCC-CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE
Confidence 45678888888877654433 47999999876654443221 223356777778888876533 347999999987765
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSL 157 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i 157 (232)
.+.. ........+.+|.++.|+++....+..+|+++++++...+.+... .......+++++++.|+++.... ..|
T Consensus 281 ~lt~-~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~--~~~~~~~~~Spdg~~i~~~~~~~~~~~l 357 (430)
T PRK00178 281 RVTN-HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV--GNYNARPRLSADGKTLVMVHRQDGNFHV 357 (430)
T ss_pred Eccc-CCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC--CCCccceEECCCCCEEEEEEccCCceEE
Confidence 5543 222334556788778888876443456899999987765554432 22334567899989999987543 368
Q ss_pred EEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCC--CCcEEEEeCCCCCcceEE
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWK--TNRIESANKEGERAPSIA 211 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~--~~~i~~~~~~g~~~~~i~ 211 (232)
+.++++++..+.+... .......+ ++..++++... ...++.++.+|...+.+.
T Consensus 358 ~~~dl~tg~~~~lt~~-~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~~~l~ 414 (430)
T PRK00178 358 AAQDLQRGSVRILTDT-SLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVRLPLP 414 (430)
T ss_pred EEEECCCCCEEEccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECc
Confidence 8999988776665432 11112234 56677777543 346888888877655443
No 42
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.96 E-value=2.3e-06 Score=71.87 Aligned_cols=203 Identities=11% Similarity=0.027 Sum_probs=132.7
Q ss_pred EEEEEeCCCCE-EEEEEcCC-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCC
Q psy5751 3 IGITVDCVEGQ-VYYSSVAD-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQP 78 (232)
Q Consensus 3 ~~i~~d~~~~~-ly~~d~~~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~ 78 (232)
....|.+..++ +|++.... .+.|+.+++.+...+.+.... ......++.+.++.|.++... +..|+.+++++...
T Consensus 191 ~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~-g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~ 269 (419)
T PRK04043 191 IFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQ-GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL 269 (419)
T ss_pred EeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCC-CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE
Confidence 35678887775 77766653 358999999877765554321 122234566667778776543 36799999988876
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC----
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS---- 154 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~---- 154 (232)
+.+..... .-......|.++.||++....+..+|+++++++...+.+.... ... ..++++++.|.++....
T Consensus 270 ~~LT~~~~-~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g-~~~---~~~SPDG~~Ia~~~~~~~~~~ 344 (419)
T PRK04043 270 TQITNYPG-IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHG-KNN---SSVSTYKNYIVYSSRETNNEF 344 (419)
T ss_pred EEcccCCC-ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCC-CcC---ceECCCCCEEEEEEcCCCccc
Confidence 65554221 1123468887888999876656678999999988775554432 222 38899988888775432
Q ss_pred ----CcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEEe
Q psy5751 155 ----KSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIAL 212 (232)
Q Consensus 155 ----~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~~ 212 (232)
.+|+.++++++..+.+.... .-....+ ++..|+++.. +...+..++.+|.....+..
T Consensus 345 ~~~~~~I~v~d~~~g~~~~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l~~ 409 (419)
T PRK04043 345 GKNTFNLYLISTNSDYIRRLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLFPL 409 (419)
T ss_pred CCCCcEEEEEECCCCCeEECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEeec
Confidence 48999999988776664421 1112334 4666766643 23458899999877665544
No 43
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=3.1e-06 Score=71.50 Aligned_cols=204 Identities=11% Similarity=0.069 Sum_probs=133.0
Q ss_pred EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~ 79 (232)
.+..|++..+.|.++....+ +.|+..++++...+.+... ......+++.+.++.|+++... ...|+.+++++...+
T Consensus 202 ~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~-~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~ 280 (429)
T PRK03629 202 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR 280 (429)
T ss_pred eeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCC-CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 36788888888876654322 4799999987665444322 1234467888888899987543 346999999887666
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSL 157 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i 157 (232)
.+... .......+.+|.++.|+++....+..+|+++++++...+.+... .......+++++++.|+++... ...|
T Consensus 281 ~lt~~-~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~--~~~~~~~~~SpDG~~Ia~~~~~~g~~~I 357 (429)
T PRK03629 281 QVTDG-RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQHI 357 (429)
T ss_pred EccCC-CCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecC--CCCccCEEECCCCCEEEEEEccCCCceE
Confidence 55542 23456778888777786665433356899999988766555432 3344568899998898887543 3468
Q ss_pred EEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceEE
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSIA 211 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i~ 211 (232)
+.++++++..+.+.... .-....+ ++..|+++.... ..+..++.+|...+.+.
T Consensus 358 ~~~dl~~g~~~~Lt~~~-~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~ 414 (429)
T PRK03629 358 AKQDLATGGVQVLTDTF-LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 414 (429)
T ss_pred EEEECCCCCeEEeCCCC-CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECc
Confidence 88999887766654321 1112233 455676665433 34777888888776554
No 44
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=98.94 E-value=9.3e-09 Score=66.39 Aligned_cols=73 Identities=11% Similarity=0.182 Sum_probs=58.9
Q ss_pred eEEEEeCCCCeEEEEEcC---------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 90 RGIVVHPYYRKLFWSDWN---------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~---------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
++++|++.+|.+||||.. ...+++.+.++.....++++.. +..|||+++++++..|.+++...
T Consensus 1 ndldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~--L~fpNGVals~d~~~vlv~Et~~ 78 (89)
T PF03088_consen 1 NDLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDG--LYFPNGVALSPDESFVLVAETGR 78 (89)
T ss_dssp -EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEE--ESSEEEEEE-TTSSEEEEEEGGG
T ss_pred CceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhC--CCccCeEEEcCCCCEEEEEeccC
Confidence 478999866999999963 2358999999999888888887 89999999999999999999999
Q ss_pred CcEEEEecCC
Q psy5751 155 KSLECMTIRN 164 (232)
Q Consensus 155 ~~i~~~~~~g 164 (232)
.+|.+.-++|
T Consensus 79 ~Ri~rywl~G 88 (89)
T PF03088_consen 79 YRILRYWLKG 88 (89)
T ss_dssp TEEEEEESSS
T ss_pred ceEEEEEEeC
Confidence 9999998887
No 45
>PF00058 Ldl_recept_b: Low-density lipoprotein receptor repeat class B; InterPro: IPR000033 The low-density lipoprotein receptor (LDLR) is the major cholesterol-carrying lipoprotein of plasma, acting to regulate cholesterol homeostasis in mammalian cells. The LDL receptor binds LDL and transports it into cells by acidic endocytosis. In order to be internalized, the receptor-ligand complex must first cluster into clathrin-coated pits. Once inside the cell, the LDLR separates from its ligand, which is degraded in the lysosomes, while the receptor returns to the cell surface []. The internal dissociation of the LDLR with its ligand is mediated by proton pumps within the walls of the endosome that lower the pH. The LDLR is a multi-domain protein, containing: The ligand-binding domain contains seven or eight 40-amino acid LDLR class A (cysteine-rich) repeats, each of which contains a coordinated calcium ion and six cysteine residues involved in disulphide bond formation []. Similar domains have been found in other extracellular and membrane proteins []. The second conserved region contains two EGF repeats, followed by six LDLR class B (YWTD) repeats, and another EGF repeat. The LDLR class B repeats each contain a conserved YWTD motif, and is predicted to form a beta-propeller structure []. This region is critical for ligand release and recycling of the receptor []. The third domain is rich in serine and threonine residues and contains clustered O-linked carbohydrate chains. The fourth domain is the hydrophobic transmembrane region. The fifth domain is the cytoplasmic tail that directs the receptor to clathrin-coated pits. LDLR is closely related in structure to several other receptors, including LRP1, LRP1b, megalin/LRP2, VLDL receptor, lipoprotein receptor, MEGF7/LRP4, and LRP8/apolipoprotein E receptor2); these proteins participate in a wide range of physiological processes, including the regulation of lipid metabolism, protection against atherosclerosis, neurodevelopment, and transport of nutrients and vitamins []. This entry represents the LDLR classB (YWTD) repeat, the structure of which has been solved []. The six YWTD repeats together fold into a six-bladed beta-propeller. Each blade of the propeller consists of four antiparallel beta-strands; the innermost strand of each blade is labeled 1 and the outermost strand, 4. The sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue YWTD repeat spans strands 24 of one propeller blade and strand 1 of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand 1 of the blade that harbors strands 24 from the first sequence repeat. The repeat is found in a variety of proteins that include, vitellogenin receptor from Drosophila melanogaster, low-density lipoprotein (LDL) receptor [], preproepidermal growth factor, and nidogen (entactin).; PDB: 3S2K_A 3S8Z_A 3S8V_B 4A0P_A 3SOB_B 3S94_B 4DG6_A 3SOV_A 3SOQ_A 1NPE_A ....
Probab=98.93 E-value=6.6e-09 Score=57.54 Aligned_cols=41 Identities=39% Similarity=0.685 Sum_probs=38.9
Q ss_pred CeEEEEeCCCC-eEEEEeCCCCCCEEEEeCCCCCceEEEEeC
Q psy5751 56 RVLYWTDSQMD-TISMANLNDDQPKVIVSKDLVNPRGIVVHP 96 (232)
Q Consensus 56 ~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~iavd~ 96 (232)
++|||+|...+ .|.+.+++|..+++++...+..|.|||||+
T Consensus 1 ~~iYWtD~~~~~~I~~a~~dGs~~~~vi~~~l~~P~giaVD~ 42 (42)
T PF00058_consen 1 GKIYWTDWSQDPSIERANLDGSNRRTVISDDLQHPEGIAVDW 42 (42)
T ss_dssp TEEEEEETTTTEEEEEEETTSTSEEEEEESSTSSEEEEEEET
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEECCCCCcCEEEECC
Confidence 57999999999 999999999999999999999999999985
No 46
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=98.93 E-value=7.4e-07 Score=74.69 Aligned_cols=164 Identities=16% Similarity=0.183 Sum_probs=113.3
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE------e-CCCCCceEEEEeCC------CCeEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV------S-KDLVNPRGIVVHPY------YRKLFW 103 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~------~-~~~~~p~~iavd~~------~~~ly~ 103 (232)
+++..++..|.+|++.+ .+++|+++...++|.+++.++.....+. . .....+.+||++|. +++||+
T Consensus 23 ~~va~GL~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYv 101 (454)
T TIGR03606 23 KVLLSGLNKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYI 101 (454)
T ss_pred EEEECCCCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEE
Confidence 55667899999999998 5689999987789999987654332221 1 13567799999964 468998
Q ss_pred EEcCC-------CCCcEEEEeCCCC-----CcEEEEEcC---CCCCcceEEEeCCCCEEEEEECC---------------
Q psy5751 104 SDWNR-------SGPKIEWSNLDGT-----DREIFLKAA---DLKLPNSLAVDFRTDELCWVDAD--------------- 153 (232)
Q Consensus 104 ~d~~~-------~~~~I~~~~~~g~-----~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~--------------- 153 (232)
+-... ...+|.|..++.. ..+.++... ..+.-..|+|+++ ++||++-..
T Consensus 102 syt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPD-G~LYVs~GD~g~~~~~n~~~~~~a 180 (454)
T TIGR03606 102 SYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPD-GKIYYTIGEQGRNQGANFFLPNQA 180 (454)
T ss_pred EEeccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCC-CcEEEEECCCCCCCcccccCcchh
Confidence 75221 1457888887632 234444321 1234557899997 789997211
Q ss_pred -----------------CCcEEEEecCCC-----------ceEEEecCCCceEEEEEE-CCEEEEEeCCC---CcEEEEe
Q psy5751 154 -----------------SKSLECMTIRNR-----------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKT---NRIESAN 201 (232)
Q Consensus 154 -----------------~~~i~~~~~~g~-----------~~~~~~~~~~~p~gla~~-~~~ly~td~~~---~~i~~~~ 201 (232)
.++|.|++.||+ ..++++-.+..|.|++++ .+.||.+|.+. .+|.++.
T Consensus 181 Q~~~~~~~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G~RNp~Gla~dp~G~Lw~~e~Gp~~~DEiN~I~ 260 (454)
T TIGR03606 181 QHTPTQQELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYGHRNPQGLAFTPDGTLYASEQGPNSDDELNIIV 260 (454)
T ss_pred ccccccccccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEeccccceeEECCCCCEEEEecCCCCCcEEEEec
Confidence 347999999986 234556689999999997 78999999765 4555555
Q ss_pred C
Q psy5751 202 K 202 (232)
Q Consensus 202 ~ 202 (232)
+
T Consensus 261 ~ 261 (454)
T TIGR03606 261 K 261 (454)
T ss_pred c
Confidence 3
No 47
>PF00058 Ldl_recept_b: Low-density lipoprotein receptor repeat class B; InterPro: IPR000033 The low-density lipoprotein receptor (LDLR) is the major cholesterol-carrying lipoprotein of plasma, acting to regulate cholesterol homeostasis in mammalian cells. The LDL receptor binds LDL and transports it into cells by acidic endocytosis. In order to be internalized, the receptor-ligand complex must first cluster into clathrin-coated pits. Once inside the cell, the LDLR separates from its ligand, which is degraded in the lysosomes, while the receptor returns to the cell surface []. The internal dissociation of the LDLR with its ligand is mediated by proton pumps within the walls of the endosome that lower the pH. The LDLR is a multi-domain protein, containing: The ligand-binding domain contains seven or eight 40-amino acid LDLR class A (cysteine-rich) repeats, each of which contains a coordinated calcium ion and six cysteine residues involved in disulphide bond formation []. Similar domains have been found in other extracellular and membrane proteins []. The second conserved region contains two EGF repeats, followed by six LDLR class B (YWTD) repeats, and another EGF repeat. The LDLR class B repeats each contain a conserved YWTD motif, and is predicted to form a beta-propeller structure []. This region is critical for ligand release and recycling of the receptor []. The third domain is rich in serine and threonine residues and contains clustered O-linked carbohydrate chains. The fourth domain is the hydrophobic transmembrane region. The fifth domain is the cytoplasmic tail that directs the receptor to clathrin-coated pits. LDLR is closely related in structure to several other receptors, including LRP1, LRP1b, megalin/LRP2, VLDL receptor, lipoprotein receptor, MEGF7/LRP4, and LRP8/apolipoprotein E receptor2); these proteins participate in a wide range of physiological processes, including the regulation of lipid metabolism, protection against atherosclerosis, neurodevelopment, and transport of nutrients and vitamins []. This entry represents the LDLR classB (YWTD) repeat, the structure of which has been solved []. The six YWTD repeats together fold into a six-bladed beta-propeller. Each blade of the propeller consists of four antiparallel beta-strands; the innermost strand of each blade is labeled 1 and the outermost strand, 4. The sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue YWTD repeat spans strands 24 of one propeller blade and strand 1 of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand 1 of the blade that harbors strands 24 from the first sequence repeat. The repeat is found in a variety of proteins that include, vitellogenin receptor from Drosophila melanogaster, low-density lipoprotein (LDL) receptor [], preproepidermal growth factor, and nidogen (entactin).; PDB: 3S2K_A 3S8Z_A 3S8V_B 4A0P_A 3SOB_B 3S94_B 4DG6_A 3SOV_A 3SOQ_A 1NPE_A ....
Probab=98.93 E-value=5.7e-09 Score=57.81 Aligned_cols=42 Identities=40% Similarity=0.964 Sum_probs=38.0
Q ss_pred CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751 99 RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 99 ~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~ 142 (232)
++|||+|+... ++|.+++++|+..++++... +..|.||++|+
T Consensus 1 ~~iYWtD~~~~-~~I~~a~~dGs~~~~vi~~~-l~~P~giaVD~ 42 (42)
T PF00058_consen 1 GKIYWTDWSQD-PSIERANLDGSNRRTVISDD-LQHPEGIAVDW 42 (42)
T ss_dssp TEEEEEETTTT-EEEEEEETTSTSEEEEEESS-TSSEEEEEEET
T ss_pred CEEEEEECCCC-cEEEEEECCCCCeEEEEECC-CCCcCEEEECC
Confidence 58999999854 58999999999999999887 99999999985
No 48
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=98.92 E-value=1.3e-06 Score=69.59 Aligned_cols=180 Identities=17% Similarity=0.089 Sum_probs=116.3
Q ss_pred CccEEEEeecCCeEEEEeCCC------------CeEEEEeCCCCCCEEEE--eC----CCCCceEEEEeCCC-----CeE
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQM------------DTISMANLNDDQPKVIV--SK----DLVNPRGIVVHPYY-----RKL 101 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~~--~~----~~~~p~~iavd~~~-----~~l 101 (232)
.+.++.+|. .++||+.|.+. -+|...|+......... .. .....++++||... +..
T Consensus 2 sV~~v~iD~-~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~a 80 (287)
T PF03022_consen 2 SVQRVQIDE-CGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFA 80 (287)
T ss_dssp -EEEEEE-T-TSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEE
Confidence 356788887 67898888763 37888888876632222 22 23355789999743 589
Q ss_pred EEEEcCCCCCcEEEEeCCCCCcEEEEEcCC------------------CCCcceEEEeC---CCCEEEEEECCCCcEEEE
Q psy5751 102 FWSDWNRSGPKIEWSNLDGTDREIFLKAAD------------------LKLPNSLAVDF---RTDELCWVDADSKSLECM 160 (232)
Q Consensus 102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~------------------~~~p~~l~~d~---~~~~Ly~~d~~~~~i~~~ 160 (232)
|++|.+. +-|.++++......-+..... .....|+++++ ++++|||......+++++
T Consensus 81 YItD~~~--~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v 158 (287)
T PF03022_consen 81 YITDSGG--PGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRV 158 (287)
T ss_dssp EEEETTT--CEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEE
T ss_pred EEeCCCc--CcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEE
Confidence 9999873 357777776543332222110 11245788876 557999999888899998
Q ss_pred ecC----CC---------ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC----CCcceEEeccCCcceeEE
Q psy5751 161 TIR----NR---------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG----ERAPSIALDMMGTTYMYG 222 (232)
Q Consensus 161 ~~~----g~---------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g----~~~~~i~~~~~~~~~p~g 222 (232)
+.+ .. ..+.+.+......|++++ .|.||+++...+.|.+.++++ +....+......+..|.+
T Consensus 159 ~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~ 238 (287)
T PF03022_consen 159 PTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDG 238 (287)
T ss_dssp EHHHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEE
T ss_pred EHHHhhCccccccccccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccce
Confidence 764 11 122333334566799997 899999999999999999997 455566666666889999
Q ss_pred EEEEc
Q psy5751 223 IAAVP 227 (232)
Q Consensus 223 i~~~~ 227 (232)
+++.+
T Consensus 239 ~~i~~ 243 (287)
T PF03022_consen 239 LKIDP 243 (287)
T ss_dssp EEE-T
T ss_pred eeecc
Confidence 99987
No 49
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.91 E-value=2.7e-06 Score=71.56 Aligned_cols=204 Identities=12% Similarity=0.047 Sum_probs=129.3
Q ss_pred EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~ 80 (232)
+..|++..+.|+++....+ ..|+.+++.+.....+... -.....+++.+.++.|+++... ...|+.+++++...+.
T Consensus 194 ~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~ 272 (417)
T TIGR02800 194 SPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASF-PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR 272 (417)
T ss_pred cccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecC-CCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEE
Confidence 4567787888888765543 3789999886654333322 1234557788877888877544 3469999998776554
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~ 158 (232)
+... .......+..+.+++|+++.......+|+.+++++...+.+... .......+++++++.|+++.... .+|+
T Consensus 273 l~~~-~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~--~~~~~~~~~spdg~~i~~~~~~~~~~~i~ 349 (417)
T TIGR02800 273 LTNG-PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFR--GGYNASPSWSPDGDLIAFVHREGGGFNIA 349 (417)
T ss_pred CCCC-CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC--CCCccCeEECCCCCEEEEEEccCCceEEE
Confidence 4431 11223456777677787775443456899999988765544433 34556788999888999987643 3789
Q ss_pred EEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceEEe
Q psy5751 159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSIAL 212 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~ 212 (232)
.++++++..+.+.+.. .....++ ++..|+++.... ..++.++.+|...+.+..
T Consensus 350 ~~d~~~~~~~~l~~~~-~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~~~~ 406 (417)
T TIGR02800 350 VMDLDGGGERVLTDTG-LDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRARLPL 406 (417)
T ss_pred EEeCCCCCeEEccCCC-CCCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeECCC
Confidence 9999886665554321 1222233 566777775543 346666666766555543
No 50
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.89 E-value=6.7e-06 Score=66.98 Aligned_cols=213 Identities=8% Similarity=-0.038 Sum_probs=123.2
Q ss_pred eEEEEEeCCCCEEEEEEc---------CCCCcEEEEEcCCCcee-EEEeCC------CCCccEEEEeecCCeEEEEeCC-
Q psy5751 2 LIGITVDCVEGQVYYSSV---------ADKSSIKRAHLDGKNVE-DVITTN------IRSPEGLTFDWVNRVLYWTDSQ- 64 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~---------~~~~~i~~~~~~g~~~~-~~~~~~------~~~p~gl~~d~~~~~ly~~d~~- 64 (232)
|.++ +.+..+.||+++. ..+ .|..++....... ++-.+. ...|..+++.+.++.||+++..
T Consensus 49 P~~~-~spDg~~lyva~~~~~R~~~G~~~d-~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p 126 (352)
T TIGR02658 49 PNPV-VASDGSFFAHASTVYSRIARGKRTD-YVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSP 126 (352)
T ss_pred Ccee-ECCCCCEEEEEeccccccccCCCCC-EEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCC
Confidence 5565 8888999999998 666 8999998865543 332221 2355599999999999999966
Q ss_pred CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcc
Q psy5751 65 MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPN 136 (232)
Q Consensus 65 ~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~ 136 (232)
...+.++|+.......-+... ..+.-+...+.+..+.+.|. +.....++..+.....+.. .+..|
T Consensus 127 ~~~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~~~~~~~Dg-----~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP- 199 (352)
T TIGR02658 127 SPAVGVVDLEGKAFVRMMDVP-DCYHIFPTANDTFFMHCRDG-----SLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP- 199 (352)
T ss_pred CCEEEEEECCCCcEEEEEeCC-CCcEEEEecCCccEEEeecC-----ceEEEEecCCCceEEeeeeeecCCccccccCC-
Confidence 889999999876643333311 12223333332333333332 2333333332221111111 12345
Q ss_pred eEEEeC-CCCEEEEEECCCCcEEEEecCCCceEEEe--c----C----CCceEE---EEE--ECCEEEEEe-C-------
Q psy5751 137 SLAVDF-RTDELCWVDADSKSLECMTIRNRVRRKVY--S----N----CTYPFG---LSI--TDEKYYWTD-W------- 192 (232)
Q Consensus 137 ~l~~d~-~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~--~----~----~~~p~g---la~--~~~~ly~td-~------- 192 (232)
.+.+ ++.++|++.. +.|..+++.+....... + . .-.|-| +++ +.+++|++. .
T Consensus 200 --~~~~~dg~~~~vs~e--G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk 275 (352)
T TIGR02658 200 --AYSNKSGRLVWPTYT--GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHK 275 (352)
T ss_pred --ceEcCCCcEEEEecC--CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccccc
Confidence 4455 4445555543 99999998765332221 1 1 113444 777 478999953 2
Q ss_pred -CCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEEcCCCC
Q psy5751 193 -KTNRIESANKEGER-APSIALDMMGTTYMYGIAAVPSSCP 231 (232)
Q Consensus 193 -~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~~~~~~ 231 (232)
..+.|..++..... ...+.. -..|.+|++-+++-|
T Consensus 276 ~~~~~V~ViD~~t~kvi~~i~v----G~~~~~iavS~Dgkp 312 (352)
T TIGR02658 276 TASRFLFVVDAKTGKRLRKIEL----GHEIDSINVSQDAKP 312 (352)
T ss_pred CCCCEEEEEECCCCeEEEEEeC----CCceeeEEECCCCCe
Confidence 22689999976333 333332 237899999888754
No 51
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=98.83 E-value=3e-08 Score=64.03 Aligned_cols=69 Identities=17% Similarity=0.205 Sum_probs=57.6
Q ss_pred ceEEEeCCCCEEEEEECC-----------------CCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCc
Q psy5751 136 NSLAVDFRTDELCWVDAD-----------------SKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNR 196 (232)
Q Consensus 136 ~~l~~d~~~~~Ly~~d~~-----------------~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~ 196 (232)
|+|+|+..+|.+||+|+. ++++.+.++.+...++++.++..|+|+++ ++..|++++....+
T Consensus 1 ndldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~~~R 80 (89)
T PF03088_consen 1 NDLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETGRYR 80 (89)
T ss_dssp -EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGGGTE
T ss_pred CceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEeccCce
Confidence 589999988999999873 68999999999999999999999999999 47799999999999
Q ss_pred EEEEeCCC
Q psy5751 197 IESANKEG 204 (232)
Q Consensus 197 i~~~~~~g 204 (232)
|.|.-..|
T Consensus 81 i~rywl~G 88 (89)
T PF03088_consen 81 ILRYWLKG 88 (89)
T ss_dssp EEEEESSS
T ss_pred EEEEEEeC
Confidence 99887665
No 52
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.83 E-value=9.3e-06 Score=67.10 Aligned_cols=190 Identities=14% Similarity=0.129 Sum_probs=119.2
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
.+.+|+++-..+ +|..++.+....-..+...-.-+.++++.+.++.+|+++. .+.|.++|+........+. ....|.
T Consensus 5 ~~l~~V~~~~~~-~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~r-dg~vsviD~~~~~~v~~i~-~G~~~~ 81 (369)
T PF02239_consen 5 GNLFYVVERGSG-SVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANR-DGTVSVIDLATGKVVATIK-VGGNPR 81 (369)
T ss_dssp GGEEEEEEGGGT-EEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEET-TSEEEEEETTSSSEEEEEE--SSEEE
T ss_pred ccEEEEEecCCC-EEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcC-CCeEEEEECCcccEEEEEe-cCCCcc
Confidence 456678888888 8999888865544444443222456777887899999975 5799999998877544444 345799
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC------CCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD------LKLPNSLAVDFRTDELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g 164 (232)
++++++.++++|++... .+.+..++.........+.... -..+.+|...+.+...+++-...++|+.+++..
T Consensus 82 ~i~~s~DG~~~~v~n~~--~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d 159 (369)
T PF02239_consen 82 GIAVSPDGKYVYVANYE--PGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSD 159 (369)
T ss_dssp EEEE--TTTEEEEEEEE--TTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTT
T ss_pred eEEEcCCCCEEEEEecC--CCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecc
Confidence 99999988999999876 4567777765443222222110 112346666666454555556678999999876
Q ss_pred CceE--EEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCC
Q psy5751 165 RVRR--KVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 165 ~~~~--~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~ 205 (232)
.+.. ........|++..++ +.+++.+...++.|..++....
T Consensus 160 ~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~ 204 (369)
T PF02239_consen 160 PKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTG 204 (369)
T ss_dssp SSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTT
T ss_pred ccccceeeecccccccccccCcccceeeecccccceeEEEeeccc
Confidence 5332 233456678888886 3467788888889998887743
No 53
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.80 E-value=2.8e-05 Score=65.72 Aligned_cols=204 Identities=9% Similarity=0.086 Sum_probs=124.6
Q ss_pred EEEeCCCCE---EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEE--eCCC--
Q psy5751 5 ITVDCVEGQ---VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMA--NLND-- 75 (232)
Q Consensus 5 i~~d~~~~~---ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~--~~~g-- 75 (232)
-.|.+.... +|++.....+.|+.++++|...+.+.... ......++.+.++.|.|+... +..|+.. ++++
T Consensus 190 P~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~-g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~ 268 (428)
T PRK01029 190 PTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQ-GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGA 268 (428)
T ss_pred ceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCC-CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCC
Confidence 357775544 34554443358999999987665554321 233456788878888887643 3356654 4432
Q ss_pred -CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 76 -DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 76 -~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
...+.+...........+.+|.++.|+++....+..+|+++++++.. .+.+... ........+++++++|+++..
T Consensus 269 ~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~--~~~~~~p~wSPDG~~Laf~~~ 346 (428)
T PRK01029 269 IGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKK--YRNSSCPAWSPDGKKIAFCSV 346 (428)
T ss_pred CCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccC--CCCccceeECCCCCEEEEEEc
Confidence 23334443222333456889877777776543345679999886432 3333222 233456789999889988854
Q ss_pred C--CCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEE
Q psy5751 153 D--SKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIA 211 (232)
Q Consensus 153 ~--~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~ 211 (232)
. ...|+.+++++++.+.+..........++ ++..|+++-. +...|+.++.++...+.+.
T Consensus 347 ~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 347 IKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred CCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 3 34799999998877766543223345555 3556776533 3467889998877666554
No 54
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=1.1e-05 Score=68.30 Aligned_cols=195 Identities=12% Similarity=0.016 Sum_probs=124.1
Q ss_pred CCEEEEEEcCC----CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeC
Q psy5751 11 EGQVYYSSVAD----KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSK 84 (232)
Q Consensus 11 ~~~ly~~d~~~----~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~ 84 (232)
+...|+++... ..+|+.++.+|...+.+... .......++.+.++.|+++... ...|++.++.+...+.+..
T Consensus 166 ~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~-~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~- 243 (435)
T PRK05137 166 TRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDG-SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGN- 243 (435)
T ss_pred CeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecC-CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeec-
Confidence 34455555443 13788999988776554433 3455667788878888777543 4679999998876655543
Q ss_pred CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEec
Q psy5751 85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTI 162 (232)
Q Consensus 85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~ 162 (232)
......+.+++|.++.|+++....+...|+.+++++...+.+... ........+++++.+|+++... ...|+.+++
T Consensus 244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~--~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDS--PAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCC--CCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 112334677888777887765443467899999988776655433 2334567889988888877543 347999999
Q ss_pred CCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcce
Q psy5751 163 RNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPS 209 (232)
Q Consensus 163 ~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~ 209 (232)
+++..+.+......-...++ +++.|+++.... ..|..++.+++..+.
T Consensus 322 ~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~ 372 (435)
T PRK05137 322 DGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERI 372 (435)
T ss_pred CCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEe
Confidence 98877666432222222334 456776664332 367777776655443
No 55
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.78 E-value=1.1e-05 Score=68.62 Aligned_cols=196 Identities=10% Similarity=0.032 Sum_probs=123.9
Q ss_pred CCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeCC
Q psy5751 11 EGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSKD 85 (232)
Q Consensus 11 ~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~ 85 (232)
....|++..... .+|+.++.+|.+.+.+... .......++.+.++.|+|+... ...|++.++++...+.+....
T Consensus 183 ~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~-~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~ 261 (448)
T PRK04792 183 TRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRS-PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP 261 (448)
T ss_pred CEEEEEEeeCCCCCceEEEEEeCCCCCceEeecC-CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC
Confidence 344566543321 2677788888765444432 2344567788888888887544 347999999887665554311
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR 163 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~ 163 (232)
......+.+|.++.|+++....+..+|+.+++++...+.+... .......++++++++|+++... ...|+.++++
T Consensus 262 -g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~--~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~ 338 (448)
T PRK04792 262 -GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRH--RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA 338 (448)
T ss_pred -CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 1223578888788888865433456799999988776555433 2345567889998889887543 3579999998
Q ss_pred CCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751 164 NRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSI 210 (232)
Q Consensus 164 g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i 210 (232)
+++.+.+........+.++ +++.|+++.... ..|+.++.++...+.+
T Consensus 339 ~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~l 389 (448)
T PRK04792 339 SGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVL 389 (448)
T ss_pred CCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEc
Confidence 7766555322222233344 466787775533 3677788776655433
No 56
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.76 E-value=1.3e-05 Score=67.73 Aligned_cols=194 Identities=9% Similarity=0.079 Sum_probs=119.5
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLVN 88 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~ 88 (232)
+...|++......+|+.++.+|...+.+... .......++.+.++.|+++.... ..|+..++++.....+.... ..
T Consensus 164 ~~iayv~~~~~~~~L~~~D~dG~~~~~l~~~-~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~-g~ 241 (427)
T PRK02889 164 TRIAYVIKTGNRYQLQISDADGQNAQSALSS-PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFK-GS 241 (427)
T ss_pred cEEEEEEccCCccEEEEECCCCCCceEeccC-CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCC-CC
Confidence 4455666443323799999988775555433 23455678888788888876443 46999999877665554322 23
Q ss_pred ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEEEEecCCCc
Q psy5751 89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLECMTIRNRV 166 (232)
Q Consensus 89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~~~~~~g~~ 166 (232)
....+.+|..+.|+++-...+..+|+.+++++...+.+... .......++++++.+|+++.. +...|+.++.+++.
T Consensus 242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~--~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~ 319 (427)
T PRK02889 242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQS--SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA 319 (427)
T ss_pred ccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCC--CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence 34678898777888765443467899999988766554332 223345679999888887643 34578999888766
Q ss_pred eEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcc
Q psy5751 167 RRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAP 208 (232)
Q Consensus 167 ~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~ 208 (232)
.+.+..........++ ++.+|+++.... ..|..++..++..+
T Consensus 320 ~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~ 365 (427)
T PRK02889 320 AQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT 365 (427)
T ss_pred eEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence 5444322111122334 455666554322 25666776644433
No 57
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.76 E-value=1.5e-05 Score=67.09 Aligned_cols=196 Identities=11% Similarity=0.015 Sum_probs=125.4
Q ss_pred CCEEEEEEc-CC-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCe-EEEEeCC--CCeEEEEeCCCCCCEEEEeCC
Q psy5751 11 EGQVYYSSV-AD-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV-LYWTDSQ--MDTISMANLNDDQPKVIVSKD 85 (232)
Q Consensus 11 ~~~ly~~d~-~~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~-ly~~d~~--~~~I~~~~~~g~~~~~~~~~~ 85 (232)
+..+|++.. .. ..+|+.++.+|.+.+.+.... ........+.++. +|++... ...|++.++.+...+.+....
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~--~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~ 232 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGG--LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQ 232 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccCC--CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCC
Confidence 567788763 21 238999999998865555432 3334566666664 7776554 467999999887777766421
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR 163 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~ 163 (232)
........+|.++.|.++....+...|+.+++++...+.+.... . .-..-.+++++++||++... ...|++++++
T Consensus 233 -g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~-~-~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~ 309 (419)
T PRK04043 233 -GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYP-G-IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLN 309 (419)
T ss_pred -CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCC-C-ccCccEECCCCCEEEEEECCCCCceEEEEECC
Confidence 12233557887778888766545788999999888766654432 1 12234689998899998654 3489999999
Q ss_pred CCceEEEecCCCceEEEEEECCEEEEEeCCC--------CcEEEEeCCCCCcceEE
Q psy5751 164 NRVRRKVYSNCTYPFGLSITDEKYYWTDWKT--------NRIESANKEGERAPSIA 211 (232)
Q Consensus 164 g~~~~~~~~~~~~p~gla~~~~~ly~td~~~--------~~i~~~~~~g~~~~~i~ 211 (232)
++..+.+......-..+.-+++.|.++.... ..|+.++.+++..+.+.
T Consensus 310 ~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT 365 (419)
T PRK04043 310 SGSVEQVVFHGKNNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLT 365 (419)
T ss_pred CCCeEeCccCCCcCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECC
Confidence 8877555332111112223566666664332 46888888766655443
No 58
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.69 E-value=5e-05 Score=64.23 Aligned_cols=196 Identities=8% Similarity=0.005 Sum_probs=123.6
Q ss_pred CCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC--CCCeEEEEeCCCCCCEEEEeCC
Q psy5751 11 EGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS--QMDTISMANLNDDQPKVIVSKD 85 (232)
Q Consensus 11 ~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~ 85 (232)
+...|+....++ ++|+.++.+|.+.+.+... -......++.+.++.|.++.. ....|+..++++...+.+....
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~-~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~ 242 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 242 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecC-CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC
Confidence 445566653321 3799999998876555443 235567888888888877643 2357999999887665554311
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR 163 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~ 163 (232)
......+.+|.+..|+++....+...|+.+++++...+.+... -......++++++++|+++-.. ..+|+.++++
T Consensus 243 -~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~--~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~ 319 (429)
T PRK03629 243 -RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN 319 (429)
T ss_pred -CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCC--CCCcCceEECCCCCEEEEEeCCCCCceEEEEECC
Confidence 2234578999888899875543345799999988766655443 2345678899998888666432 3489999999
Q ss_pred CCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751 164 NRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSI 210 (232)
Q Consensus 164 g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i 210 (232)
++..+.+..........++ ++..|+++...+ ..|+.++..+...+.+
T Consensus 320 ~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~L 370 (429)
T PRK03629 320 GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 370 (429)
T ss_pred CCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEe
Confidence 8766655332222223344 355665554322 3466677665544433
No 59
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.68 E-value=2.6e-05 Score=66.07 Aligned_cols=183 Identities=11% Similarity=0.085 Sum_probs=117.8
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL 101 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l 101 (232)
.|+.++.+|.....+... -....+.++.+.++.|+++... ...|++.++++.....+.... ......+++|.++.|
T Consensus 185 ~l~i~D~~g~~~~~lt~~-~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~-g~~~~~~~SpDG~~l 262 (433)
T PRK04922 185 ALQVADSDGYNPQTILRS-AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR-GINGAPSFSPDGRRL 262 (433)
T ss_pred EEEEECCCCCCceEeecC-CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC-CCccCceECCCCCEE
Confidence 588888888766555433 2345567777878888887644 346999999887665554321 123367888877788
Q ss_pred EEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCCCceEEEecCCCceEE
Q psy5751 102 FWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRNRVRRKVYSNCTYPFG 179 (232)
Q Consensus 102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g~~~~~~~~~~~~p~g 179 (232)
+++....+...|+.+++++...+.+... .......++++++.+|+++... ...|+.++++++..+.+.........
T Consensus 263 ~~~~s~~g~~~Iy~~d~~~g~~~~lt~~--~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~ 340 (433)
T PRK04922 263 ALTLSRDGNPEIYVMDLGSRQLTRLTNH--FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNAR 340 (433)
T ss_pred EEEEeCCCCceEEEEECCCCCeEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccC
Confidence 8775443456899999988776554433 2234567899998888887543 34699999987765554322222234
Q ss_pred EEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751 180 LSI--TDEKYYWTDWKT--NRIESANKEGERAPSI 210 (232)
Q Consensus 180 la~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i 210 (232)
.++ ++..++++.... ..|..++..++..+.+
T Consensus 341 ~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~L 375 (433)
T PRK04922 341 ASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTL 375 (433)
T ss_pred EEECCCCCEEEEEECCCCceeEEEEECCCCCeEEC
Confidence 455 466777765433 3577888776554433
No 60
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.66 E-value=4.8e-05 Score=63.99 Aligned_cols=193 Identities=14% Similarity=0.096 Sum_probs=121.9
Q ss_pred CEEEEEEcC-C-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCC
Q psy5751 12 GQVYYSSVA-D-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLV 87 (232)
Q Consensus 12 ~~ly~~d~~-~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~ 87 (232)
..+|+.... . ...|+.++.+|...+.+.... ......++.+.++.|+|+.... ..|++.++.+.....+.. ...
T Consensus 157 ~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~-~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~-~~~ 234 (417)
T TIGR02800 157 RIAYVSKSGKSRRYELQVADYDGANPQTITRSR-EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS-FPG 234 (417)
T ss_pred EEEEEEEeCCCCcceEEEEcCCCCCCEEeecCC-CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec-CCC
Confidence 345555543 1 136888888877665555432 2345567778788898886543 579999988765544443 212
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCCC
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRNR 165 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g~ 165 (232)
....++.+|.++.|+++....+...|+..++++...+.+... ........+++++.+|+++... ...|+.+++++.
T Consensus 235 ~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~ 312 (417)
T TIGR02800 235 MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNG--PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGG 312 (417)
T ss_pred CccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCC--CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 344578888777888876544456799999987765554332 1223355778887888877543 347999999887
Q ss_pred ceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcc
Q psy5751 166 VRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAP 208 (232)
Q Consensus 166 ~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~ 208 (232)
+.+.+..........++ ++..++++.... .+|..++..+...+
T Consensus 313 ~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~ 359 (417)
T TIGR02800 313 EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER 359 (417)
T ss_pred CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE
Confidence 76555433333344455 356777776543 36777777764444
No 61
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=98.65 E-value=1.3e-05 Score=67.32 Aligned_cols=148 Identities=18% Similarity=0.194 Sum_probs=100.9
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE------Ee-CCCCCccEEEEeec------CCeEEEEeC----
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV------IT-TNIRSPEGLTFDWV------NRVLYWTDS---- 63 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~------~~-~~~~~p~gl~~d~~------~~~ly~~d~---- 63 (232)
.|.+|+|.+ +++||++.-..+ +|.++...+.....+ .. ..-....||++++. ++.||++-.
T Consensus 31 ~Pw~maflP-DG~llVtER~~G-~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 31 KPWALLWGP-DNQLWVTERATG-KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred CceEEEEcC-CCeEEEEEecCC-EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence 478999998 679999987556 899987665432222 11 13467899999854 467998742
Q ss_pred -----CCCeEEEEeCCCC-----CCEEEEeC----CCCCceEEEEeCCCCeEEEEEcCC---------------------
Q psy5751 64 -----QMDTISMANLNDD-----QPKVIVSK----DLVNPRGIVVHPYYRKLFWSDWNR--------------------- 108 (232)
Q Consensus 64 -----~~~~I~~~~~~g~-----~~~~~~~~----~~~~p~~iavd~~~~~ly~~d~~~--------------------- 108 (232)
...+|.+..++.. ..+.++.. ....-..|+++| .|.||++-...
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgP-DG~LYVs~GD~g~~~~~n~~~~~~aQ~~~~~~ 187 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGP-DGKIYYTIGEQGRNQGANFFLPNQAQHTPTQQ 187 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECC-CCcEEEEECCCCCCCcccccCcchhccccccc
Confidence 2457888877532 13455541 123346889998 78999974332
Q ss_pred ---------CCCcEEEEeCCCCC-----------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 109 ---------SGPKIEWSNLDGTD-----------REIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 109 ---------~~~~I~~~~~~g~~-----------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
..++|.|++.||+. .++.... +.+|.++++|+ +++||.+|.+.
T Consensus 188 ~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G--~RNp~Gla~dp-~G~Lw~~e~Gp 250 (454)
T TIGR03606 188 ELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYG--HRNPQGLAFTP-DGTLYASEQGP 250 (454)
T ss_pred cccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEe--ccccceeEECC-CCCEEEEecCC
Confidence 13589999999863 2344444 88999999999 59999998763
No 62
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.64 E-value=5.6e-05 Score=63.96 Aligned_cols=199 Identities=12% Similarity=0.082 Sum_probs=124.3
Q ss_pred EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~ 79 (232)
.++.|++..+.|.++...++ +.|+..++.+...+.+... ......+++.+.++.|+++.... -.|+.+++++....
T Consensus 207 ~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~-~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~ 285 (429)
T PRK01742 207 MSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASF-RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPS 285 (429)
T ss_pred ccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecC-CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeE
Confidence 35788888888877755432 4799999987654333322 12334578888788888864332 36888898877655
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.+.. ........+.+|.+..|+++....+..+|+.++.++...+.+ ... . ...+++++++.|+++.. ..+..
T Consensus 286 ~lt~-~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~---~-~~~~~SpDG~~ia~~~~--~~i~~ 357 (429)
T PRK01742 286 QLTS-GAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGR---G-YSAQISADGKTLVMING--DNVVK 357 (429)
T ss_pred eecc-CCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCC---C-CCccCCCCCCEEEEEcC--CCEEE
Confidence 5543 333455678888777777775443467899998887765544 221 1 34678888888888754 56788
Q ss_pred EecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC-C-cEEEEeCCCCCcceEE
Q psy5751 160 MTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT-N-RIESANKEGERAPSIA 211 (232)
Q Consensus 160 ~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~-~-~i~~~~~~g~~~~~i~ 211 (232)
+++.++..+.+.... ....+++ ++..|+++.... . .+..++.+|...+.+.
T Consensus 358 ~Dl~~g~~~~lt~~~-~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~ 412 (429)
T PRK01742 358 QDLTSGSTEVLSSTF-LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP 412 (429)
T ss_pred EECCCCCeEEecCCC-CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence 888876655443321 1123344 455677664432 2 2344566777666553
No 63
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=98.64 E-value=1.2e-05 Score=62.91 Aligned_cols=188 Identities=17% Similarity=0.133 Sum_probs=121.1
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-----CCCCEEEEe-C------CCCCceEEEEeCCCC-----
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-----DDQPKVIVS-K------DLVNPRGIVVHPYYR----- 99 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-----g~~~~~~~~-~------~~~~p~~iavd~~~~----- 99 (232)
....+.+..|+||++.+ ++.++++|..++....++.+ |.....++. . ....|-|+++....+
T Consensus 16 ~~tDp~L~N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~ 94 (336)
T TIGR03118 16 QIVDPGLRNAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSG 94 (336)
T ss_pred cccCccccccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcC
Confidence 34446788999999999 66889999999999999887 544333333 1 234688888774333
Q ss_pred --------eEEEEEcCCCCCcEEEEeC--CCC---CcEEEEEcC-CCCCcceEEEeCC--CCEEEEEECCCCcEEEEecC
Q psy5751 100 --------KLFWSDWNRSGPKIEWSNL--DGT---DREIFLKAA-DLKLPNSLAVDFR--TDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 100 --------~ly~~d~~~~~~~I~~~~~--~g~---~~~~~~~~~-~~~~p~~l~~d~~--~~~Ly~~d~~~~~i~~~~~~ 163 (232)
.||.++ .+.|...+. +.. ...+++... ....-.||++-.. ..+||-+|-.+++|..++-.
T Consensus 95 ~g~~~~a~Fif~tE----dGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~ 170 (336)
T TIGR03118 95 EGITGPSRFLFVTE----DGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS 170 (336)
T ss_pred CCcccceeEEEEeC----CceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence 244443 223433332 222 122333321 1222358888754 57999999999999997444
Q ss_pred CCceEE---Ee----cCCCceEEEEEECCEEEEEeC-------------CCCcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751 164 NRVRRK---VY----SNCTYPFGLSITDEKYYWTDW-------------KTNRIESANKEGERAPSIALDMMGTTYMYGI 223 (232)
Q Consensus 164 g~~~~~---~~----~~~~~p~gla~~~~~ly~td~-------------~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi 223 (232)
-..... +. -..-.|++|...+++||||-. +.+.|-.++.+|..++.+.. ...++.|+||
T Consensus 171 f~~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as-~g~LNaPWG~ 249 (336)
T TIGR03118 171 FRPPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVAS-SGRLNAPWGL 249 (336)
T ss_pred cccccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEecc-CCcccCCcee
Confidence 222211 00 012347888889999999843 33588899999988886643 3448899999
Q ss_pred EEEcCCC
Q psy5751 224 AAVPSSC 230 (232)
Q Consensus 224 ~~~~~~~ 230 (232)
|+.+..|
T Consensus 250 a~APa~F 256 (336)
T TIGR03118 250 AIAPESF 256 (336)
T ss_pred eeChhhh
Confidence 9998776
No 64
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=98.62 E-value=1.7e-07 Score=52.14 Aligned_cols=35 Identities=31% Similarity=0.495 Sum_probs=33.4
Q ss_pred CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 132 LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 132 ~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
+..|+|+++|+.+++|||+|.....|++++++|..
T Consensus 8 ~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~~ 42 (43)
T smart00135 8 LGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGTN 42 (43)
T ss_pred CCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCCC
Confidence 89999999999999999999999999999999875
No 65
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=98.62 E-value=4.4e-05 Score=59.91 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=123.3
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-----CCceeEEEe-C------CCCCccEEEEeecCC------------
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-----GKNVEDVIT-T------NIRSPEGLTFDWVNR------------ 56 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-----g~~~~~~~~-~------~~~~p~gl~~d~~~~------------ 56 (232)
+|=||++.+ .+.+|++|-..+ ....++.+ |.....++. + ....|.|+.+.....
T Consensus 24 N~WGia~~p-~~~~WVadngT~-~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 24 NAWGLSYRP-GGPFWVANTGTG-TATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred ccceeEecC-CCCEEEecCCcc-eEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 355889988 667888887666 55555555 333222222 1 235788988875332
Q ss_pred -eEEEEeCCCCeEEEEeCCCCCC----E-EEEeCC--CCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCCcEEE
Q psy5751 57 -VLYWTDSQMDTISMANLNDDQP----K-VIVSKD--LVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTDREIF 126 (232)
Q Consensus 57 -~ly~~d~~~~~I~~~~~~g~~~----~-~~~~~~--~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~~~~~ 126 (232)
.||.++. +.|.-....-... . ++++.+ ..-=.|+|+... ..+||-++.. .++|.+.+-.-....
T Consensus 102 ~Fif~tEd--GTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~--~g~IDVFd~~f~~~~-- 175 (336)
T TIGR03118 102 RFLFVTED--GTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFR--QGRIDVFKGSFRPPP-- 175 (336)
T ss_pred eEEEEeCC--ceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccC--CCceEEecCcccccc--
Confidence 2443333 3455444322111 2 233322 222368887743 5899999986 567887754333221
Q ss_pred EEcC-------CCCCcceEEEeCCCCEEEEEE-------------CCCCcEEEEecCCCceEEEec--CCCceEEEEE--
Q psy5751 127 LKAA-------DLKLPNSLAVDFRTDELCWVD-------------ADSKSLECMTIRNRVRRKVYS--NCTYPFGLSI-- 182 (232)
Q Consensus 127 ~~~~-------~~~~p~~l~~d~~~~~Ly~~d-------------~~~~~i~~~~~~g~~~~~~~~--~~~~p~gla~-- 182 (232)
+... --..|-+|.-- +++||++= .+.+.|..++++|.-.+.+.+ .+..|+||++
T Consensus 176 ~~g~F~DP~iPagyAPFnIqni--g~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as~g~LNaPWG~a~AP 253 (336)
T TIGR03118 176 LPGSFIDPALPAGYAPFNVQNL--GGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVASSGRLNAPWGLAIAP 253 (336)
T ss_pred CCCCccCCCCCCCCCCcceEEE--CCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEeccCCcccCCceeeeCh
Confidence 1111 02344455333 48999992 124689999999998887865 6899999997
Q ss_pred -----ECCEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751 183 -----TDEKYYWTDWKTNRIESANKE-GERAPSIA 211 (232)
Q Consensus 183 -----~~~~ly~td~~~~~i~~~~~~-g~~~~~i~ 211 (232)
+.+.|.+-+.+.++|-.+++. |...-.++
T Consensus 254 a~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~ 288 (336)
T TIGR03118 254 ESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLL 288 (336)
T ss_pred hhhCCCCCCeEEeecCCceeEEecCCCCceeeeec
Confidence 378999999999999999987 55444343
No 66
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.62 E-value=7.4e-05 Score=63.24 Aligned_cols=196 Identities=9% Similarity=0.054 Sum_probs=121.3
Q ss_pred CCEEEEEEcCCC----CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeC
Q psy5751 11 EGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSK 84 (232)
Q Consensus 11 ~~~ly~~d~~~~----~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~ 84 (232)
+..+|++..... .+|+.++.+|.....+.... ......++.+.++.|+++... ...|++.++++...+.+...
T Consensus 163 ~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~-~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~ 241 (430)
T PRK00178 163 TRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSR-EPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNF 241 (430)
T ss_pred eeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCC-CceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCC
Confidence 345566543221 25788888887654554332 344667787878888776544 35799999988766555432
Q ss_pred CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEec
Q psy5751 85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTI 162 (232)
Q Consensus 85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~ 162 (232)
. ......+.+|.++.|+++....+...|+.+++++...+.+... ........+++++++||++... ...|+.+++
T Consensus 242 ~-g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~--~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~ 318 (430)
T PRK00178 242 E-GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNH--PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNV 318 (430)
T ss_pred C-CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccC--CCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence 2 1223577888777888765443456899999998776655433 2234456788988888887543 347999999
Q ss_pred CCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751 163 RNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSI 210 (232)
Q Consensus 163 ~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i 210 (232)
++++.+.+..........++ +++.|+++.... ..|..++..+...+.+
T Consensus 319 ~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~l 370 (430)
T PRK00178 319 NGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRIL 370 (430)
T ss_pred CCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEc
Confidence 87766554322111122233 466777775433 2577777766554444
No 67
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.60 E-value=4.2e-05 Score=63.25 Aligned_cols=163 Identities=12% Similarity=0.129 Sum_probs=107.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
++.+.+....+|+++- ++ .|.++++.....-..+..+ ..|.++++.+.++.+|++++..+.+..+|.........+.
T Consensus 41 ~~~~s~Dgr~~yv~~r-dg-~vsviD~~~~~~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~ 117 (369)
T PF02239_consen 41 GLKFSPDGRYLYVANR-DG-TVSVIDLATGKVVATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP 117 (369)
T ss_dssp EEE-TT-SSEEEEEET-TS-EEEEEETTSSSEEEEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred EEEecCCCCEEEEEcC-CC-eEEEEECCcccEEEEEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence 4667777788999984 45 8999999876654444444 5899999999899999999999999999987766443333
Q ss_pred -C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 84 -K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 84 -~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
. .-.++.++...+.+. .|+.... +.++|+.++..... ...-.... ...|.+..+|+++++++.+....+
T Consensus 118 ~~~~~~~~~~~Rv~aIv~s~~~~-~fVv~lk-d~~~I~vVdy~d~~~~~~~~i~~-g~~~~D~~~dpdgry~~va~~~sn 194 (369)
T PF02239_consen 118 TGGMPVDGPESRVAAIVASPGRP-EFVVNLK-DTGEIWVVDYSDPKNLKVTTIKV-GRFPHDGGFDPDGRYFLVAANGSN 194 (369)
T ss_dssp --EE-TTTS---EEEEEE-SSSS-EEEEEET-TTTEEEEEETTTSSCEEEEEEE---TTEEEEEE-TTSSEEEEEEGGGT
T ss_pred cccccccccCCCceeEEecCCCC-EEEEEEc-cCCeEEEEEeccccccceeeecc-cccccccccCcccceeeecccccc
Confidence 1 122445676666444 4444433 36789999876543 22222222 568999999999888888888888
Q ss_pred cEEEEecCCCceEEEec
Q psy5751 156 SLECMTIRNRVRRKVYS 172 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~~ 172 (232)
.|..++....+......
T Consensus 195 ~i~viD~~~~k~v~~i~ 211 (369)
T PF02239_consen 195 KIAVIDTKTGKLVALID 211 (369)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred eeEEEeeccceEEEEee
Confidence 99999988766555444
No 68
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=98.55 E-value=5e-07 Score=50.24 Aligned_cols=41 Identities=37% Similarity=0.838 Sum_probs=36.7
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
.++..++..|.|+++|+.+++|||+|.....|.+++++|..
T Consensus 2 ~~~~~~~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~~ 42 (43)
T smart00135 2 TLLSEGLGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGTN 42 (43)
T ss_pred EEEECCCCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCCC
Confidence 35556789999999999999999999999999999999864
No 69
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=98.53 E-value=0.00021 Score=56.61 Aligned_cols=180 Identities=11% Similarity=0.105 Sum_probs=116.6
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEE
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ--------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIE 114 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~--------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~ 114 (232)
-....|++ .++.+++.++.-..+-..+.+-.. +..+..++-=+.+|||+.. +.--|+|..++. ...=+
T Consensus 103 idiHdia~--~~~~l~fVNT~fSCLatl~~~~SF~P~WkPpFIs~la~eDRCHLNGlA~~~-g~p~yVTa~~~sD~~~gW 179 (335)
T TIGR03032 103 IDAHDLAL--GAGRLLFVNTLFSCLATVSPDYSFVPLWKPPFISKLAPEDRCHLNGMALDD-GEPRYVTALSQSDVADGW 179 (335)
T ss_pred cchhheee--cCCcEEEEECcceeEEEECCCCccccccCCccccccCccCceeecceeeeC-CeEEEEEEeeccCCcccc
Confidence 35666777 366788888777777777665543 1222223334678999983 556666654322 12233
Q ss_pred EEeCCCCC-------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEE
Q psy5751 115 WSNLDGTD-------REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKY 187 (232)
Q Consensus 115 ~~~~~g~~-------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~l 187 (232)
|-...... -+++.+. +..|.+--.. +++||++|++++++.+++++.++.+.++.....|.||++.++.+
T Consensus 180 R~~~~~gG~vidv~s~evl~~G--LsmPhSPRWh--dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~G~ll 255 (335)
T TIGR03032 180 REGRRDGGCVIDIPSGEVVASG--LSMPHSPRWY--QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFAGDFA 255 (335)
T ss_pred cccccCCeEEEEeCCCCEEEcC--ccCCcCCcEe--CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCcccceeCCEE
Confidence 33322222 1333333 5666655555 48999999999999999999777777888788899999998888
Q ss_pred EEEeCCCC-------------------cEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC-CCC
Q psy5751 188 YWTDWKTN-------------------RIESANKE-GERAPSIALDMMGTTYMYGIAAVPS-SCP 231 (232)
Q Consensus 188 y~td~~~~-------------------~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~-~~~ 231 (232)
++.-++-+ -|..++.. |..+.-+++ .....+.|.|+|.+. .||
T Consensus 256 vVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l~f-eg~v~EifdV~vLPg~r~P 319 (335)
T TIGR03032 256 FVGLSKLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWLRF-EGVIEEIYDVAVLPGVRRP 319 (335)
T ss_pred EEEeccccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEEEe-CCceeEEEEEEEecCCCCc
Confidence 88766432 36667766 444555554 334778899999887 444
No 70
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.38 E-value=0.0004 Score=58.82 Aligned_cols=185 Identities=10% Similarity=0.030 Sum_probs=114.4
Q ss_pred CEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeCCC
Q psy5751 12 GQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSKDL 86 (232)
Q Consensus 12 ~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~ 86 (232)
...|+....++ .+|+.++.+|.....+.. .......+++.+.++.|+++... ...|+..++.+...+.+....
T Consensus 170 ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~-~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~- 247 (429)
T PRK01742 170 RIAYVVQKNGGSQPYEVRVADYDGFNQFIVNR-SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFR- 247 (429)
T ss_pred EEEEEEEEcCCCceEEEEEECCCCCCceEecc-CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCC-
Confidence 34466654331 378888999887544433 23356778888888888887543 347999999876655544311
Q ss_pred CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEEEEecCC
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLECMTIRN 164 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~~~~~~g 164 (232)
..-...+.+|.+..|+++....+..+|+.+++++.....+... .......++++++.+|+++.. +..+|+.++.++
T Consensus 248 g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~--~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~ 325 (429)
T PRK01742 248 GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSG--AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG 325 (429)
T ss_pred CccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccC--CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 1223578888777888875432345789999887766655443 334567899999888887754 345888888887
Q ss_pred CceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCC
Q psy5751 165 RVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 165 ~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~ 205 (232)
...+.+.... ...++ ++..|+++.. ..+..++..++
T Consensus 326 ~~~~~l~~~~---~~~~~SpDG~~ia~~~~--~~i~~~Dl~~g 363 (429)
T PRK01742 326 GGASLVGGRG---YSAQISADGKTLVMING--DNVVKQDLTSG 363 (429)
T ss_pred CCeEEecCCC---CCccCCCCCCEEEEEcC--CCEEEEECCCC
Confidence 7665442111 12233 3445555432 34555665543
No 71
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=98.38 E-value=0.00022 Score=58.42 Aligned_cols=189 Identities=16% Similarity=0.199 Sum_probs=103.9
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEee----cCC---eEEEEeCCC--Ce--EEEEeCCCCCCE
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDW----VNR---VLYWTDSQM--DT--ISMANLNDDQPK 79 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~----~~~---~ly~~d~~~--~~--I~~~~~~g~~~~ 79 (232)
...+.-+|.. . .++.++++|...+.+- ...++.+.+-. .++ .+..++... +. |++++.+.....
T Consensus 68 kSlIigTdK~-~-GL~VYdL~Gk~lq~~~---~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~ 142 (381)
T PF02333_consen 68 KSLIIGTDKK-G-GLYVYDLDGKELQSLP---VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT 142 (381)
T ss_dssp G-EEEEEETT-T-EEEEEETTS-EEEEE----SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE
T ss_pred cceEEEEeCC-C-CEEEEcCCCcEEEeec---CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcce
Confidence 3345555554 3 5899999998765442 23444444321 111 234455542 34 445554322222
Q ss_pred EE------EeCCCCCceEEEEe--CCCCeEEEEEcCCCCCcEEEEeC--CCCCc--EEEE-EcCCCCCcceEEEeCCCCE
Q psy5751 80 VI------VSKDLVNPRGIVVH--PYYRKLFWSDWNRSGPKIEWSNL--DGTDR--EIFL-KAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 80 ~~------~~~~~~~p~~iavd--~~~~~ly~~d~~~~~~~I~~~~~--~g~~~--~~~~-~~~~~~~p~~l~~d~~~~~ 146 (232)
.+ +...+..|.|+++- +..|.+|..-.++ .+.+....+ ++... -.++ ....-.++.|+++|...++
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k-~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~ 221 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGK-DGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR 221 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEET-TSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecC-CceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence 22 12356678999974 4567787765543 356666555 33321 1112 1111468999999999999
Q ss_pred EEEEECCCCcEEEEecC--C-CceEEEec----CC-CceEEEEEE-----CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 147 LCWVDADSKSLECMTIR--N-RVRRKVYS----NC-TYPFGLSIT-----DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~--g-~~~~~~~~----~~-~~p~gla~~-----~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
||+++... -||+++.+ + ..++.+.. .+ ....||+++ .++|.+++-+++....++..+..
T Consensus 222 LYvgEE~~-GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~ 293 (381)
T PF02333_consen 222 LYVGEEDV-GIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPN 293 (381)
T ss_dssp EEEEETTT-EEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT-
T ss_pred EEEecCcc-EEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCC
Confidence 99999864 59999887 3 33444422 12 345699984 35899999998888888887643
No 72
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.37 E-value=0.00056 Score=53.02 Aligned_cols=214 Identities=12% Similarity=0.024 Sum_probs=129.8
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
.+.+.+.++.|+.+.. ++ .|...+++.......+......+..+.+.+. +.++++....+.|...++........+.
T Consensus 56 ~~~~~~~~~~l~~~~~-~~-~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 132 (289)
T cd00200 56 DVAASADGTYLASGSS-DK-TIRLWDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLR 132 (289)
T ss_pred EEEECCCCCEEEEEcC-CC-eEEEEEcCcccceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEec
Confidence 6777775556665554 44 6888888764332333333346778888875 4566666667889999988444333333
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
.....+..+++++.+..++.... .+.|...++............ ......+++++.+..++.+.. .+.|...+++
T Consensus 133 ~~~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-~~~i~i~d~~ 207 (289)
T cd00200 133 GHTDWVNSVAFSPDGTFVASSSQ---DGTIKLWDLRTGKCVATLTGH-TGEVNSVAFSPDGEKLLSSSS-DGTIKLWDLS 207 (289)
T ss_pred cCCCcEEEEEEcCcCCEEEEEcC---CCcEEEEEccccccceeEecC-ccccceEEECCCcCEEEEecC-CCcEEEEECC
Confidence 34456789999986454444431 346888887644333333322 346789999998667777755 7888888887
Q ss_pred CCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751 164 NRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 164 g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
........ ........+++. ++.++++....+.|..++... .....+. .....+..+++.++
T Consensus 208 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~---~~~~~i~~~~~~~~ 272 (289)
T cd00200 208 TGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS---GHTNSVTSLAWSPD 272 (289)
T ss_pred CCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc---ccCCcEEEEEECCC
Confidence 54433333 233355677775 356666666578888888763 3333332 22334555665543
No 73
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=98.34 E-value=0.00023 Score=58.74 Aligned_cols=139 Identities=15% Similarity=0.128 Sum_probs=88.4
Q ss_pred CCceEEEEeCCCCeEEEEEcCC-----------CCCcEEEEeC--------CCCCcEEEEEcCCCCCcceEEEeCCCCEE
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNR-----------SGPKIEWSNL--------DGTDREIFLKAADLKLPNSLAVDFRTDEL 147 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~-----------~~~~I~~~~~--------~g~~~~~~~~~~~~~~p~~l~~d~~~~~L 147 (232)
..-..|+++| +|+||++-... ..++|.+.+. ++...++.... +.+|.|+++++.++.|
T Consensus 177 H~g~~l~f~p-DG~Lyvs~G~~~~~~~aq~~~~~~Gk~~r~~~a~~~~~d~p~~~~~i~s~G--~RN~qGl~w~P~tg~L 253 (399)
T COG2133 177 HFGGRLVFGP-DGKLYVTTGSNGDPALAQDNVSLAGKVLRIDRAGIIPADNPFPNSEIWSYG--HRNPQGLAWHPVTGAL 253 (399)
T ss_pred cCcccEEECC-CCcEEEEeCCCCCcccccCccccccceeeeccCcccccCCCCCCcceEEec--cCCccceeecCCCCcE
Confidence 3456899998 66999985433 1455555543 34445555554 8899999999999999
Q ss_pred EEEECCCCcE------EEEec---------------CCCce--EEEec----------CCCceEEEEEEC--------CE
Q psy5751 148 CWVDADSKSL------ECMTI---------------RNRVR--RKVYS----------NCTYPFGLSITD--------EK 186 (232)
Q Consensus 148 y~~d~~~~~i------~~~~~---------------~g~~~--~~~~~----------~~~~p~gla~~~--------~~ 186 (232)
|.++.+...+ ..+.. +|... -.... --..|.|++++. +.
T Consensus 254 w~~e~g~d~~~~~Deln~i~~G~nYGWP~~~~G~~~~g~~~~~~~~~~~~~~p~~~~~~h~ApsGmaFy~G~~fP~~r~~ 333 (399)
T COG2133 254 WTTEHGPDALRGPDELNSIRPGKNYGWPYAYFGQNYDGRAIPDGTVVAGAIQPVYTWAPHIAPSGMAFYTGDLFPAYRGD 333 (399)
T ss_pred EEEecCCCcccCcccccccccCCccCCceeccCcccCccccCCCcccccccCCceeeccccccceeEEecCCcCccccCc
Confidence 9999876322 22111 11100 00000 123367999874 68
Q ss_pred EEEEeCCCCcEEEEeCCCC---CcceEEeccCCcceeEEEEEEcCC
Q psy5751 187 YYWTDWKTNRIESANKEGE---RAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 187 ly~td~~~~~i~~~~~~g~---~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
|+++..+++.+.+++++|. ..+.+.....+ ..|.+|++.++.
T Consensus 334 lfV~~hgsw~~~~~~~~g~~~~~~~~fl~~d~~-gR~~dV~v~~DG 378 (399)
T COG2133 334 LFVGAHGSWPVLRLRPDGNYKVVLTGFLSGDLG-GRPRDVAVAPDG 378 (399)
T ss_pred EEEEeecceeEEEeccCCCcceEEEEEEecCCC-CcccceEECCCC
Confidence 9999999999999999987 22222222122 688998888764
No 74
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.32 E-value=0.00075 Score=52.30 Aligned_cols=188 Identities=15% Similarity=0.092 Sum_probs=113.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++.+++. +.++++...++ .|..+++........+......+..+++++.+..++ +....+.|...++........+
T Consensus 97 ~~~~~~~~-~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~i~d~~~~~~~~~~ 173 (289)
T cd00200 97 SSVAFSPD-GRILSSSSRDK-TIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVA-SSSQDGTIKLWDLRTGKCVATL 173 (289)
T ss_pred EEEEEcCC-CCEEEEecCCC-eEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEE-EEcCCCcEEEEEccccccceeE
Confidence 46777775 45555555455 788888874333233333334678888988645444 5445678999998755444444
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
.........+++++.+..++.+.. .+.|...++............ ......+++++. +.++++-...+.|...++
T Consensus 174 ~~~~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~~~~~~~~i~i~~~ 248 (289)
T cd00200 174 TGHTGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLSTGKCLGTLRGH-ENGVNSVAFSPD-GYLLASGSEDGTIRVWDL 248 (289)
T ss_pred ecCccccceEEECCCcCEEEEecC---CCcEEEEECCCCceecchhhc-CCceEEEEEcCC-CcEEEEEcCCCcEEEEEc
Confidence 434446788999985556766654 456888887654333222121 336788999987 666666666788888888
Q ss_pred CCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEE
Q psy5751 163 RNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIE 198 (232)
Q Consensus 163 ~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~ 198 (232)
+.... ..+......+.++++. ++..+++-..++.+.
T Consensus 249 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 286 (289)
T cd00200 249 RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIR 286 (289)
T ss_pred CCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEE
Confidence 75433 2222233345677775 334445444445443
No 75
>KOG0279|consensus
Probab=98.30 E-value=0.00085 Score=51.91 Aligned_cols=204 Identities=12% Similarity=0.069 Sum_probs=139.8
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK 84 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 84 (232)
++..+ ++..+++---++ .++..++.+......+...-....++++...++.| ++.+....|...+.-|...-.+.+.
T Consensus 69 v~~s~-dg~~alS~swD~-~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qi-vSGSrDkTiklwnt~g~ck~t~~~~ 145 (315)
T KOG0279|consen 69 VVLSS-DGNFALSASWDG-TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI-VSGSRDKTIKLWNTLGVCKYTIHED 145 (315)
T ss_pred eEEcc-CCceEEeccccc-eEEEEEecCCcEEEEEEecCCceEEEEecCCCcee-ecCCCcceeeeeeecccEEEEEecC
Confidence 33444 444444444445 68888998765545555555788999999966665 5888888899999888776666664
Q ss_pred C-CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 85 D-LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 85 ~-~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
. -.-..-+.+.|.....++...+. ...+...++++-......... -...+.++++++ |.|+-+-...+.++-.+++
T Consensus 146 ~~~~WVscvrfsP~~~~p~Ivs~s~-DktvKvWnl~~~~l~~~~~gh-~~~v~t~~vSpD-GslcasGgkdg~~~LwdL~ 222 (315)
T KOG0279|consen 146 SHREWVSCVRFSPNESNPIIVSASW-DKTVKVWNLRNCQLRTTFIGH-SGYVNTVTVSPD-GSLCASGGKDGEAMLWDLN 222 (315)
T ss_pred CCcCcEEEEEEcCCCCCcEEEEccC-CceEEEEccCCcchhhccccc-cccEEEEEECCC-CCEEecCCCCceEEEEEcc
Confidence 4 56677888998665666655432 345777888877665555443 567889999998 7777776667899999998
Q ss_pred CCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751 164 NRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDM 214 (232)
Q Consensus 164 g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~ 214 (232)
-++.-.-++.....+++++-.++.+.+-.....|...+.+ +..+..+.+..
T Consensus 223 ~~k~lysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~ 274 (315)
T KOG0279|consen 223 EGKNLYSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDG 274 (315)
T ss_pred CCceeEeccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccc
Confidence 6655333445566678888777877777666667778877 34444554433
No 76
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.28 E-value=0.00031 Score=60.86 Aligned_cols=191 Identities=13% Similarity=0.031 Sum_probs=117.0
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEe-------------------ecCCeEEEEeCCCCeEEE
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFD-------------------WVNRVLYWTDSQMDTISM 70 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d-------------------~~~~~ly~~d~~~~~I~~ 70 (232)
...||+-|..+. ||.|++++--...+++. ++.....|+.+. +.++.++.++...+.+.+
T Consensus 141 Gr~~findk~n~-Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 141 GRYLFINDKANT-RVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred eeEEEEecCCCc-ceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 456666666666 99999998654444443 334455555544 233344444444456677
Q ss_pred EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-------------------------------------CcE
Q psy5751 71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-------------------------------------PKI 113 (232)
Q Consensus 71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-------------------------------------~~I 113 (232)
+|.+.....--+. -..+|..+++++.++++|++..+.+. ++|
T Consensus 220 ID~etmeV~~qV~-Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V 298 (635)
T PRK02888 220 VDAETMEVAWQVM-VDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV 298 (635)
T ss_pred EECccceEEEEEE-eCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence 7766433211111 12388999999988999998532210 112
Q ss_pred EEEeCCCC---CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce---------EEE---ecCCCceE
Q psy5751 114 EWSNLDGT---DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR---------RKV---YSNCTYPF 178 (232)
Q Consensus 114 ~~~~~~g~---~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~---------~~~---~~~~~~p~ 178 (232)
..++.... ...++..-..-..|.|+.+++++.++|++....+.+..+++...+. ..+ .+....|.
T Consensus 299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL 378 (635)
T PRK02888 299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL 378 (635)
T ss_pred EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence 22222110 0111111111468999999999999999998899999999875331 222 22456788
Q ss_pred EEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 179 GLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 179 gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..+++ .|+.|.|-+-...|...+.+
T Consensus 379 HTaFDg~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 379 HTAFDGRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred eEEECCCCCEEEeEeecceeEEEehH
Confidence 88887 56899998888888888754
No 77
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=98.21 E-value=0.0014 Score=51.01 Aligned_cols=188 Identities=13% Similarity=0.038 Sum_probs=120.4
Q ss_pred EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCcee-EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVE-DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~-~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|+.|.. ++.||-+--..+ ++|.+++++..... +.-.+...-.+|+++- ++.||-.-...+..++.|.+......
T Consensus 48 QGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~tl~~~~ 124 (264)
T PF05096_consen 48 QGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNTLKKIG 124 (264)
T ss_dssp EEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred ccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCeEEEEccccceEEE
Confidence 4788853 689998875554 68999999965532 3333444577899988 68999999999999999998765444
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE--EEcC--CCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF--LKAA--DLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~--~~~~--~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
-+. -....+||+-| +..|+.+|. ..+|+..+...-...-- +... .+..-|=|..- +|.||=--..+++
T Consensus 125 ~~~-y~~EGWGLt~d--g~~Li~SDG---S~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i--~G~IyANVW~td~ 196 (264)
T PF05096_consen 125 TFP-YPGEGWGLTSD--GKRLIMSDG---SSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI--NGKIYANVWQTDR 196 (264)
T ss_dssp EEE--SSS--EEEEC--SSCEEEE-S---SSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE--TTEEEEEETTSSE
T ss_pred EEe-cCCcceEEEcC--CCEEEEECC---ccceEEECCcccceEEEEEEEECCEECCCcEeEEEE--cCEEEEEeCCCCe
Confidence 444 23578999987 889999995 46788888765432221 2211 13333444443 5888877788999
Q ss_pred EEEEecCCCceEEEec--C--------------CCceEEEEEE--CCEEEEEeCCCCcEEEEe
Q psy5751 157 LECMTIRNRVRRKVYS--N--------------CTYPFGLSIT--DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~--~--------------~~~p~gla~~--~~~ly~td~~~~~i~~~~ 201 (232)
|.++++..+.+..+.. . ..-.+|||++ .+++|+|--.=..++.+.
T Consensus 197 I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~lyeV~ 259 (264)
T PF05096_consen 197 IVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKLYEVK 259 (264)
T ss_dssp EEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEEEEEE
T ss_pred EEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCceEEEE
Confidence 9999999887766532 1 1225799996 689999854334555543
No 78
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.21 E-value=0.0019 Score=54.72 Aligned_cols=166 Identities=10% Similarity=0.091 Sum_probs=103.1
Q ss_pred EEEEeCCCCEEEEEEcC-CCCcEEEE--EcCC---CceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCC
Q psy5751 4 GITVDCVEGQVYYSSVA-DKSSIKRA--HLDG---KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLND 75 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~-~~~~i~~~--~~~g---~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g 75 (232)
+..|.+..++|.++... ..+.++.. ++++ .....+...........++.+.++.|+++... ...|+++++++
T Consensus 235 ~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~ 314 (428)
T PRK01029 235 MPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDP 314 (428)
T ss_pred ceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcc
Confidence 45677877777766432 22256654 3332 22223333222233456888878877776543 34688888764
Q ss_pred CC--CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 76 DQ--PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 76 ~~--~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
.. .+.+.. ........+.+|.++.|+++....+..+|+.+++++...+.+... .......+++++++.|+++...
T Consensus 315 ~g~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~--~~~~~~p~wSpDG~~L~f~~~~ 391 (428)
T PRK01029 315 EGQSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS--PENKESPSWAIDSLHLVYSAGN 391 (428)
T ss_pred cccceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC--CCCccceEECCCCCEEEEEECC
Confidence 32 333322 223345677898888888876544456799999998877666543 2344668889988888887543
Q ss_pred --CCcEEEEecCCCceEEEec
Q psy5751 154 --SKSLECMTIRNRVRRKVYS 172 (232)
Q Consensus 154 --~~~i~~~~~~g~~~~~~~~ 172 (232)
...|+.+++++++.+.+..
T Consensus 392 ~g~~~L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 392 SNESELYLISLITKKTRKIVI 412 (428)
T ss_pred CCCceEEEEECCCCCEEEeec
Confidence 4579999999887766643
No 79
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=98.21 E-value=0.00022 Score=56.50 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=43.3
Q ss_pred EEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEE
Q psy5751 168 RKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAV 226 (232)
Q Consensus 168 ~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~ 226 (232)
+++++++..|.+-.+++|+||++|++.+++.+++++ |....+.. .++.|.|++..
T Consensus 196 evl~~GLsmPhSPRWhdgrLwvldsgtGev~~vD~~~G~~e~Va~----vpG~~rGL~f~ 251 (335)
T TIGR03032 196 EVVASGLSMPHSPRWYQGKLWLLNSGRGELGYVDPQAGKFQPVAF----LPGFTRGLAFA 251 (335)
T ss_pred CEEEcCccCCcCCcEeCCeEEEEECCCCEEEEEcCCCCcEEEEEE----CCCCCccccee
Confidence 456778889999999999999999999999999998 55444433 35567777654
No 80
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.19 E-value=0.0018 Score=52.18 Aligned_cols=200 Identities=12% Similarity=0.078 Sum_probs=121.0
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS- 83 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~- 83 (232)
+.+...+.++|+.|+.....|.++++.....-.. +..|.+.-+.+..+.=|.+-...+++..+.++.......-.
T Consensus 100 ~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~e----i~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t 175 (342)
T PF06433_consen 100 FALSADGKFLYVQNFTPATSVTVVDLAAKKVVGE----IDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKST 175 (342)
T ss_dssp EEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEE----EEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEE
T ss_pred eEEccCCcEEEEEccCCCCeEEEEECCCCceeee----ecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeec
Confidence 4566778999999998776899999997664222 23344444444343345677788999988887544332221
Q ss_pred ---CCCCCc--eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcc---eEEEeCCCCEE
Q psy5751 84 ---KDLVNP--RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPN---SLAVDFRTDEL 147 (232)
Q Consensus 84 ---~~~~~p--~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~---~l~~d~~~~~L 147 (232)
....+| ..-+....++.+||... .++|+.+++.+...+....-. .-..|. -+++++..++|
T Consensus 176 ~~F~~~~dp~f~~~~~~~~~~~~~F~Sy---~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rl 252 (342)
T PF06433_consen 176 KVFDPDDDPLFEHPAYSRDGGRLYFVSY---EGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRL 252 (342)
T ss_dssp EESSTTTS-B-S--EEETTTTEEEEEBT---TSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEE
T ss_pred cccCCCCcccccccceECCCCeEEEEec---CCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeE
Confidence 122233 12233444678888775 467999999988765544321 122343 48999999999
Q ss_pred EEEECC---------CCcEEEEecCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751 148 CWVDAD---------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKE-GERAPSIA 211 (232)
Q Consensus 148 y~~d~~---------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~-g~~~~~i~ 211 (232)
|+.-.. ...||.+|+...++-.-...-....+|++. +. .||-++...+.+..++.. |+..+.+.
T Consensus 253 yvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 998431 237999999876552222211223377773 32 677777777889989887 55555554
No 81
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=98.18 E-value=0.00066 Score=56.09 Aligned_cols=160 Identities=16% Similarity=0.089 Sum_probs=100.7
Q ss_pred CCccEEEEeecCCeEEEEeCCC-------------CeEEEEeCCCCC-------CEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQM-------------DTISMANLNDDQ-------PKVIVSKDLVNPRGIVVHPYYRKLFW 103 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~-------------~~I~~~~~~g~~-------~~~~~~~~~~~p~~iavd~~~~~ly~ 103 (232)
..-..|++++.+ .||++-..+ +.|.+.+.++.. ...+......+|.|++.+|.+|.||.
T Consensus 177 H~g~~l~f~pDG-~Lyvs~G~~~~~~~aq~~~~~~Gk~~r~~~a~~~~~d~p~~~~~i~s~G~RN~qGl~w~P~tg~Lw~ 255 (399)
T COG2133 177 HFGGRLVFGPDG-KLYVTTGSNGDPALAQDNVSLAGKVLRIDRAGIIPADNPFPNSEIWSYGHRNPQGLAWHPVTGALWT 255 (399)
T ss_pred cCcccEEECCCC-cEEEEeCCCCCcccccCccccccceeeeccCcccccCCCCCCcceEEeccCCccceeecCCCCcEEE
Confidence 345679999965 899985332 444455444432 12344457889999999999999999
Q ss_pred EEcCCCCC----cEEEEe---------------CCCC------CcEEEEEcC----CCCCcceEEEeCCC------CEEE
Q psy5751 104 SDWNRSGP----KIEWSN---------------LDGT------DREIFLKAA----DLKLPNSLAVDFRT------DELC 148 (232)
Q Consensus 104 ~d~~~~~~----~I~~~~---------------~~g~------~~~~~~~~~----~~~~p~~l~~d~~~------~~Ly 148 (232)
++.+++.- .+.... .++. ......... ....|.||+|-..+ +.||
T Consensus 256 ~e~g~d~~~~~Deln~i~~G~nYGWP~~~~G~~~~g~~~~~~~~~~~~~~p~~~~~~h~ApsGmaFy~G~~fP~~r~~lf 335 (399)
T COG2133 256 TEHGPDALRGPDELNSIRPGKNYGWPYAYFGQNYDGRAIPDGTVVAGAIQPVYTWAPHIAPSGMAFYTGDLFPAYRGDLF 335 (399)
T ss_pred EecCCCcccCcccccccccCCccCCceeccCcccCccccCCCcccccccCCceeeccccccceeEEecCCcCccccCcEE
Confidence 99765210 011110 0111 000000000 02356899998643 6899
Q ss_pred EEECCCCcEEEEecCCCceEE---Eec--CCCceEEEEEE-CCEEEEEeCC-CCcEEEEeCCC
Q psy5751 149 WVDADSKSLECMTIRNRVRRK---VYS--NCTYPFGLSIT-DEKYYWTDWK-TNRIESANKEG 204 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~g~~~~~---~~~--~~~~p~gla~~-~~~ly~td~~-~~~i~~~~~~g 204 (232)
++..+.-.+.+++++|..+.. ++. ....|.++++. +|.||+++-. +++|+|+.+.+
T Consensus 336 V~~hgsw~~~~~~~~g~~~~~~~~fl~~d~~gR~~dV~v~~DGallv~~D~~~g~i~Rv~~~~ 398 (399)
T COG2133 336 VGAHGSWPVLRLRPDGNYKVVLTGFLSGDLGGRPRDVAVAPDGALLVLTDQGDGRILRVSYAG 398 (399)
T ss_pred EEeecceeEEEeccCCCcceEEEEEEecCCCCcccceEECCCCeEEEeecCCCCeEEEecCCC
Confidence 998877778888888873322 222 33689999985 8888888655 67999998764
No 82
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.03 E-value=0.0022 Score=50.29 Aligned_cols=182 Identities=16% Similarity=0.081 Sum_probs=119.4
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE-EEcCCCCCcEEEEeCCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW-SDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~-~d~~~~~~~I~~~~~~g~~ 122 (232)
....+|++++..+.||.+-..--.|...+.+|...+.+--..+.+|.+|+.- ++..|+ ++-. ..+++....+...
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyi--g~n~fvi~dER--~~~l~~~~vd~~t 161 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYI--GGNQFVIVDER--DRALYLFTVDADT 161 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEe--cCCEEEEEehh--cceEEEEEEcCCc
Confidence 4589999999999999877666789999999988777766788999999987 344444 4433 3445555444332
Q ss_pred cE-------EEEEcC--CCCCcceEEEeCCCCEEEEEECCCC-cEEEEecCCCc--eEEEec-------CCCceEEEEEE
Q psy5751 123 RE-------IFLKAA--DLKLPNSLAVDFRTDELCWVDADSK-SLECMTIRNRV--RRKVYS-------NCTYPFGLSIT 183 (232)
Q Consensus 123 ~~-------~~~~~~--~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~~~~~g~~--~~~~~~-------~~~~p~gla~~ 183 (232)
.. +-+... --..-.|+|-|+.+++||++...+. .|+.+...-.. ...... .+....|+.++
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 11 111111 0123469999999999999987665 56666533211 111100 12223477776
Q ss_pred --CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC--C----cceeEEEEEEcCC
Q psy5751 184 --DEKYYWTDWKTNRIESANKEGERAPSIALDMM--G----TTYMYGIAAVPSS 229 (232)
Q Consensus 184 --~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~--~----~~~p~gi~~~~~~ 229 (232)
.+.|++---.++.+..++..|.....+.+... + .+.+=|||+..++
T Consensus 242 ~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g 295 (316)
T COG3204 242 AITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDG 295 (316)
T ss_pred CCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCC
Confidence 67888887778999999999988776665431 1 3457788887764
No 83
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=97.96 E-value=2.6e-05 Score=38.95 Aligned_cols=28 Identities=18% Similarity=0.413 Sum_probs=24.2
Q ss_pred CCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 132 LKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 132 ~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+..|.||++++ ++.||++|.++++|.++
T Consensus 1 f~~P~gvav~~-~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 1 FNYPHGVAVDS-DGNIYVADSGNHRVQVF 28 (28)
T ss_dssp BSSEEEEEEET-TSEEEEEECCCTEEEEE
T ss_pred CcCCcEEEEeC-CCCEEEEECCCCEEEEC
Confidence 35799999995 59999999999999864
No 84
>KOG4499|consensus
Probab=97.84 E-value=0.0022 Score=48.79 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=75.9
Q ss_pred CCCCCccEEEEeecCCeEEEEeCCCCeEEEEe--CCCCC---CEEEEe--C----CCCCceEEEEeCCCCeEEEEEcCCC
Q psy5751 41 TNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN--LNDDQ---PKVIVS--K----DLVNPRGIVVHPYYRKLFWSDWNRS 109 (232)
Q Consensus 41 ~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~--~~g~~---~~~~~~--~----~~~~p~~iavd~~~~~ly~~d~~~~ 109 (232)
..+.-++||+-|...+..|++|+.+..|-..+ ..+.. +++++. . .-..|.||+||. .|.||++-++
T Consensus 155 ~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~n-- 231 (310)
T KOG4499|consen 155 NCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFN-- 231 (310)
T ss_pred hhccCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEec--
Confidence 45668899999998999999999999996555 44432 566665 1 234689999997 8999999998
Q ss_pred CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-CEEEEEE
Q psy5751 110 GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-DELCWVD 151 (232)
Q Consensus 110 ~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-~~Ly~~d 151 (232)
.++|.++++....+..-+.-+ -.+....+|--.+ +.||++-
T Consensus 232 g~~V~~~dp~tGK~L~eiklP-t~qitsccFgGkn~d~~yvT~ 273 (310)
T KOG4499|consen 232 GGTVQKVDPTTGKILLEIKLP-TPQITSCCFGGKNLDILYVTT 273 (310)
T ss_pred CcEEEEECCCCCcEEEEEEcC-CCceEEEEecCCCccEEEEEe
Confidence 578999988766544333322 3455667766543 4667764
No 85
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=97.75 E-value=0.00011 Score=36.64 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=24.3
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEE
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMA 71 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~ 71 (232)
+..|.||++++ ++.||++|..+++|.+.
T Consensus 1 f~~P~gvav~~-~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 1 FNYPHGVAVDS-DGNIYVADSGNHRVQVF 28 (28)
T ss_dssp BSSEEEEEEET-TSEEEEEECCCTEEEEE
T ss_pred CcCCcEEEEeC-CCCEEEEECCCCEEEEC
Confidence 35799999995 89999999999999863
No 86
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.73 E-value=0.0028 Score=55.15 Aligned_cols=148 Identities=9% Similarity=0.070 Sum_probs=93.4
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEe--CCCCeEEEEEc-----C----------CCCCcEEEE
Q psy5751 55 NRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVH--PYYRKLFWSDW-----N----------RSGPKIEWS 116 (232)
Q Consensus 55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd--~~~~~ly~~d~-----~----------~~~~~I~~~ 116 (232)
++.||+-|..+.||-+++++.-.+..++. .+.....|++.. |.++++|.... . .-.+.+..+
T Consensus 141 Gr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvI 220 (635)
T PRK02888 141 GRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAV 220 (635)
T ss_pred eeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEE
Confidence 68899999999999999999887776666 555566677765 55565554321 0 001222233
Q ss_pred eCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC---------------------------------------CcE
Q psy5751 117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS---------------------------------------KSL 157 (232)
Q Consensus 117 ~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~---------------------------------------~~i 157 (232)
+.+ ..++..+-.--..|..++++++++++|++.... ++|
T Consensus 221 D~e--tmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V 298 (635)
T PRK02888 221 DAE--TMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV 298 (635)
T ss_pred ECc--cceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence 222 222222211134789999999999999994211 223
Q ss_pred EEEecCC-----CceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCC
Q psy5751 158 ECMTIRN-----RVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 158 ~~~~~~g-----~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g 204 (232)
..+|... ........-...|+|+++ ++.++|++...++.+..++...
T Consensus 299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence 3333332 111222335677999998 5789999999999999999764
No 87
>KOG0291|consensus
Probab=97.62 E-value=0.041 Score=48.53 Aligned_cols=199 Identities=12% Similarity=0.053 Sum_probs=124.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.++.|....+.|+ +...++ ++...++. ..+.++...+....-..+|+|+.+..+.......-.|++.++.......+
T Consensus 396 t~v~f~~~g~~ll-ssSLDG-tVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDi 473 (893)
T KOG0291|consen 396 TAVQFTARGNVLL-SSSLDG-TVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDI 473 (893)
T ss_pred EEEEEEecCCEEE-EeecCC-eEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeeh
Confidence 5777887555554 444455 68888887 45566666666667789999996666665566667899999988877777
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
+..+-.-..+++++|.+..|+-..|... |.+.++-... .+.+-. -.-.-++++.|++..|.++-. .+.|.-
T Consensus 474 LsGHEgPVs~l~f~~~~~~LaS~SWDkT---VRiW~if~s~~~vEtl~i---~sdvl~vsfrPdG~elaVaTl-dgqItf 546 (893)
T KOG0291|consen 474 LSGHEGPVSGLSFSPDGSLLASGSWDKT---VRIWDIFSSSGTVETLEI---RSDVLAVSFRPDGKELAVATL-DGQITF 546 (893)
T ss_pred hcCCCCcceeeEEccccCeEEeccccce---EEEEEeeccCceeeeEee---ccceeEEEEcCCCCeEEEEEe-cceEEE
Confidence 7655545578999998888888888753 5555555443 333322 234678999999999988844 333333
Q ss_pred Eec---------CC------Cce--EEE-ec---CCCceEEEEE-ECCEEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751 160 MTI---------RN------RVR--RKV-YS---NCTYPFGLSI-TDEKYYWTDWKTNRIESANKE-GERAPSI 210 (232)
Q Consensus 160 ~~~---------~g------~~~--~~~-~~---~~~~p~gla~-~~~~ly~td~~~~~i~~~~~~-g~~~~~i 210 (232)
.+. +| +.. ..+ ++ ....-..|.+ ++|.+..+-..++.|...+-. +-.++.+
T Consensus 547 ~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkf 620 (893)
T KOG0291|consen 547 FDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKF 620 (893)
T ss_pred EEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeE
Confidence 333 21 111 111 11 1222335666 477777776667766666654 3344433
No 88
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=97.61 E-value=0.021 Score=44.98 Aligned_cols=175 Identities=11% Similarity=0.159 Sum_probs=110.2
Q ss_pred CCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CC-CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE-e--
Q psy5751 9 CVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NI-RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV-S-- 83 (232)
Q Consensus 9 ~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~-~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~-- 83 (232)
-.++..|++|...+ |..+++..-...++... +. ....++.+. ++..|++|-..+ +..+|+.....-.+. .
T Consensus 94 vse~yvyvad~ssG--L~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddg-fLivdvsdpssP~lagrya 168 (370)
T COG5276 94 VSEEYVYVADWSSG--LRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDG-FLIVDVSDPSSPQLAGRYA 168 (370)
T ss_pred ecccEEEEEcCCCc--eEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCc-EEEEECCCCCCceeeeeec
Confidence 35789999997766 88888876543333321 22 233444444 799999997644 555666554432222 2
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
........++++ +++-|++.++.+ +...+.......+++..- -..|.--++....++.|.++...+ +..++.+
T Consensus 169 ~~~~d~~~v~IS--Gn~AYvA~~d~G---L~ivDVSnp~sPvli~~~-n~g~g~~sv~vsdnr~y~vvy~eg-vlivd~s 241 (370)
T COG5276 169 LPGGDTHDVAIS--GNYAYVAWRDGG---LTIVDVSNPHSPVLIGSY-NTGPGTYSVSVSDNRAYLVVYDEG-VLIVDVS 241 (370)
T ss_pred cCCCCceeEEEe--cCeEEEEEeCCC---eEEEEccCCCCCeEEEEE-ecCCceEEEEecCCeeEEEEcccc-eEEEecC
Confidence 233344688998 899999987743 666666555555555432 234444444454579999987665 6677778
Q ss_pred CCceEEEe-c-CCCceEEE---EEECCEEEEEeCCCC
Q psy5751 164 NRVRRKVY-S-NCTYPFGL---SITDEKYYWTDWKTN 195 (232)
Q Consensus 164 g~~~~~~~-~-~~~~p~gl---a~~~~~ly~td~~~~ 195 (232)
+....++. + ..+.|.++ .+-+++.|+++...+
T Consensus 242 ~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~g 278 (370)
T COG5276 242 GPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKG 278 (370)
T ss_pred CCCCceEeeccccCCcccccceecccceeeeeccccC
Confidence 77654443 2 55556655 677999999998765
No 89
>KOG0291|consensus
Probab=97.54 E-value=0.054 Score=47.79 Aligned_cols=163 Identities=13% Similarity=0.083 Sum_probs=107.2
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GT 121 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~ 121 (232)
......+++.+.++ +..|....+.|-+.|.....+-+.+.++.+...++.+...+..|+-+... +.+...++. ..
T Consensus 350 ~~~i~~l~YSpDgq-~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLD---GtVRAwDlkRYr 425 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQ-LIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLD---GTVRAWDLKRYR 425 (893)
T ss_pred ccceeeEEECCCCc-EEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecC---CeEEeeeecccc
Confidence 56778899988655 55688888999999999988888888787788888888644444444332 345555553 23
Q ss_pred CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceE-EEEEE--CCEEEEEeCCCCcEE
Q psy5751 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPF-GLSIT--DEKYYWTDWKTNRIE 198 (232)
Q Consensus 122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~-gla~~--~~~ly~td~~~~~i~ 198 (232)
+-+++.... -.+-+.+++|+.+.-++-.....-.|...++..++.-.++++-..|. ++++. ...|+-.-| .+.|.
T Consensus 426 NfRTft~P~-p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SW-DkTVR 503 (893)
T KOG0291|consen 426 NFRTFTSPE-PIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSW-DKTVR 503 (893)
T ss_pred eeeeecCCC-ceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccc-cceEE
Confidence 444444433 44568999999855554444444578888888777666677666664 67773 444544455 46677
Q ss_pred EEeCCCC--CcceEE
Q psy5751 199 SANKEGE--RAPSIA 211 (232)
Q Consensus 199 ~~~~~g~--~~~~i~ 211 (232)
.-+-.++ ..+++.
T Consensus 504 iW~if~s~~~vEtl~ 518 (893)
T KOG0291|consen 504 IWDIFSSSGTVETLE 518 (893)
T ss_pred EEEeeccCceeeeEe
Confidence 6666654 444443
No 90
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.46 E-value=0.053 Score=45.88 Aligned_cols=153 Identities=11% Similarity=0.063 Sum_probs=96.5
Q ss_pred EeCCCCEEEEEEcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEE
Q psy5751 7 VDCVEGQVYYSSVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIV 82 (232)
Q Consensus 7 ~d~~~~~ly~~d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~ 82 (232)
+.+....+.+.....+ ++++..+++....+.++... ..-...++.+.+++|.++...+ -.|+.+|++++....+.
T Consensus 200 ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~-g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt 278 (425)
T COG0823 200 WSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN-GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLT 278 (425)
T ss_pred cCcCCCceEEEEEecCCCceEEEEeccCCccceeeccC-CccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecc
Confidence 3344455544444333 35888888876665565532 2223345555577777776554 46999999998855544
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc--EEEE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS--LECM 160 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~--i~~~ 160 (232)
+ ....-..-.+.|.+..|+++....+..+|++++++|...+.+... ......-.+++++.+|-+.....+. |...
T Consensus 279 ~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~--~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~ 355 (425)
T COG0823 279 N-GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFS--GGGNSNPVWSPDGDKIVFESSSGGQWDIDKN 355 (425)
T ss_pred c-CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeecc--CCCCcCccCCCCCCEEEEEeccCCceeeEEe
Confidence 3 111112445777788999887766788999999999988766655 3444456677877777666643344 5555
Q ss_pred ecC
Q psy5751 161 TIR 163 (232)
Q Consensus 161 ~~~ 163 (232)
++.
T Consensus 356 ~~~ 358 (425)
T COG0823 356 DLA 358 (425)
T ss_pred ccC
Confidence 554
No 91
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.39 E-value=0.021 Score=47.05 Aligned_cols=159 Identities=11% Similarity=0.119 Sum_probs=87.8
Q ss_pred CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC-CCCCce
Q psy5751 12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK-DLVNPR 90 (232)
Q Consensus 12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~ 90 (232)
..||.++..++..++.+++.......+....-....|..+.+.++.||+.... ..+.++++++...+.+..- ..-...
T Consensus 49 kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-~~l~~vdL~T~e~~~vy~~p~~~~g~ 127 (386)
T PF14583_consen 49 KLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-RSLRRVDLDTLEERVVYEVPDDWKGY 127 (386)
T ss_dssp EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-TEEEEEETTT--EEEEEE--TTEEEE
T ss_pred EEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-CeEEEEECCcCcEEEEEECCcccccc
Confidence 45566675554589999999877655544322333456666778888765433 5899999999877666651 111112
Q ss_pred EEEEeCCCCeEEEEE------c--------------CCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-CEEEE
Q psy5751 91 GIVVHPYYRKLFWSD------W--------------NRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-DELCW 149 (232)
Q Consensus 91 ~iavd~~~~~ly~~d------~--------------~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-~~Ly~ 149 (232)
+-.+...++.+++.. + .....+|.++++.++..++++.. -.+-+.+-++|.. ..|-+
T Consensus 128 gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~--~~wlgH~~fsP~dp~li~f 205 (386)
T PF14583_consen 128 GTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFED--TDWLGHVQFSPTDPTLIMF 205 (386)
T ss_dssp EEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEE--SS-EEEEEEETTEEEEEEE
T ss_pred cceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEec--CccccCcccCCCCCCEEEE
Confidence 233222244444321 0 12246899999999998888887 4666778888853 56777
Q ss_pred EECC-----CCcEEEEecCCCceEEEecC
Q psy5751 150 VDAD-----SKSLECMTIRNRVRRKVYSN 173 (232)
Q Consensus 150 ~d~~-----~~~i~~~~~~g~~~~~~~~~ 173 (232)
|..+ ..+||.++.+|++.+.+.+.
T Consensus 206 CHEGpw~~Vd~RiW~i~~dg~~~~~v~~~ 234 (386)
T PF14583_consen 206 CHEGPWDLVDQRIWTINTDGSNVKKVHRR 234 (386)
T ss_dssp EE-S-TTTSS-SEEEEETTS---EESS--
T ss_pred eccCCcceeceEEEEEEcCCCcceeeecC
Confidence 7654 46999999999988777554
No 92
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.38 E-value=0.043 Score=42.92 Aligned_cols=154 Identities=18% Similarity=0.141 Sum_probs=101.2
Q ss_pred CccEEEEeecCCeEEEEeCCCC--eEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMD--TISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
--.|+.++. .+.||-+....+ +|.++++++........ ...---.|+++. ++.||.-.|. .++..+.+.+.-
T Consensus 46 FTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk--~~~~f~yd~~tl 120 (264)
T PF05096_consen 46 FTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWK--EGTGFVYDPNTL 120 (264)
T ss_dssp EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESS--SSEEEEEETTTT
T ss_pred cCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEec--CCeEEEEccccc
Confidence 447888854 678998876654 78899998766433332 222245689988 8999999998 567888888754
Q ss_pred CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecCCCc----eEEEEEECCEEEEEeCCCC
Q psy5751 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSNCTY----PFGLSITDEKYYWTDWKTN 195 (232)
Q Consensus 122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~~~~----p~gla~~~~~ly~td~~~~ 195 (232)
....-+.. ...-.||+-| +..||.+|. +.+++..++..-+. +.+ +..... .+-|.+.+|.||---|.+.
T Consensus 121 ~~~~~~~y--~~EGWGLt~d--g~~Li~SDG-S~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td 195 (264)
T PF05096_consen 121 KKIGTFPY--PGEGWGLTSD--GKRLIMSDG-SSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTD 195 (264)
T ss_dssp EEEEEEE---SSS--EEEEC--SSCEEEE-S-SSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSS
T ss_pred eEEEEEec--CCcceEEEcC--CCEEEEECC-ccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCC
Confidence 33332332 2456788855 478888875 77899999875432 223 223333 3567778999999999999
Q ss_pred cEEEEeCCCCCcc
Q psy5751 196 RIESANKEGERAP 208 (232)
Q Consensus 196 ~i~~~~~~g~~~~ 208 (232)
+|.+++|..+.+.
T Consensus 196 ~I~~Idp~tG~V~ 208 (264)
T PF05096_consen 196 RIVRIDPETGKVV 208 (264)
T ss_dssp EEEEEETTT-BEE
T ss_pred eEEEEeCCCCeEE
Confidence 9999999855544
No 93
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=97.36 E-value=0.015 Score=50.48 Aligned_cols=65 Identities=15% Similarity=0.287 Sum_probs=47.8
Q ss_pred CCCCCccEEEEeecCCeEEEEeCCCC-------------------eEEEEeCCCCC-------CEEEEe-----------
Q psy5751 41 TNIRSPEGLTFDWVNRVLYWTDSQMD-------------------TISMANLNDDQ-------PKVIVS----------- 83 (232)
Q Consensus 41 ~~~~~p~gl~~d~~~~~ly~~d~~~~-------------------~I~~~~~~g~~-------~~~~~~----------- 83 (232)
+.+..|+++++++.++.+|++-+.++ +|+++..++.. -..++.
T Consensus 347 T~f~RpEgi~~~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~~~~~f~~~~~~~~g~~~~~~~~~ 426 (524)
T PF05787_consen 347 TPFDRPEGITVNPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDHAATTFTWELFLVGGDPTDASGNG 426 (524)
T ss_pred ccccCccCeeEeCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCccccceeEEEEEEEecCcccccccc
Confidence 35789999999999999999975543 89999877651 122221
Q ss_pred ------CCCCCceEEEEeCCCCeEEEEEc
Q psy5751 84 ------KDLVNPRGIVVHPYYRKLFWSDW 106 (232)
Q Consensus 84 ------~~~~~p~~iavd~~~~~ly~~d~ 106 (232)
..++.|..|++++ .|.||+..-
T Consensus 427 ~~~~~~~~f~sPDNL~~d~-~G~LwI~eD 454 (524)
T PF05787_consen 427 SNKCDDNGFASPDNLAFDP-DGNLWIQED 454 (524)
T ss_pred cCcccCCCcCCCCceEECC-CCCEEEEeC
Confidence 2377999999998 677777643
No 94
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=97.29 E-value=0.03 Score=48.64 Aligned_cols=138 Identities=20% Similarity=0.202 Sum_probs=79.6
Q ss_pred eCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-CeEEEEeCCCC----------
Q psy5751 8 DCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-DTISMANLNDD---------- 76 (232)
Q Consensus 8 d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-~~I~~~~~~g~---------- 76 (232)
+.....+|.+|......|||+..+......- .....--++ .+.||++.-.. +.+..+.+.-.
T Consensus 255 ~~~~~vvY~gDD~~~~~lYkFVs~~~~~~~~-----~~~~~~ll~--~GtLyaak~~~~g~~~Wv~L~~~~~~l~~~~~~ 327 (524)
T PF05787_consen 255 DPGRVVVYMGDDGRNGYLYKFVSDKPWDPGD-----RAANRDLLD--EGTLYAAKFNQDGTGEWVPLGHGQGGLTAKNGF 327 (524)
T ss_pred cCCeEEEEEEecCCCCeEEEEecCCCCCCcc-----cchhhhhhh--CCEeceEEECCCCcEEEEECCCcccccccCCCC
Confidence 6667788999887666899988775432000 000000011 34455443221 22333333211
Q ss_pred -C--------C--E-EEEeCCCCCceEEEEeCCCCeEEEEEcCCC-----------------CCcEEEEeCCCC------
Q psy5751 77 -Q--------P--K-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-----------------GPKIEWSNLDGT------ 121 (232)
Q Consensus 77 -~--------~--~-~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-----------------~~~I~~~~~~g~------ 121 (232)
. + . .+-...+.+|.+++++|.++.+|++..+.. .++|+++..++.
T Consensus 328 ~~~a~v~~~tr~aA~~~GAT~f~RpEgi~~~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~~~~~ 407 (524)
T PF05787_consen 328 ADQADVLIETRRAADAVGATPFDRPEGITVNPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDHAATT 407 (524)
T ss_pred CChHHhhhhhhhccccCccccccCccCeeEeCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCccccce
Confidence 0 0 0 011146889999999999999999864322 358999887765
Q ss_pred -CcEEEEEc----------------CCCCCcceEEEeCCCCEEEEEECC
Q psy5751 122 -DREIFLKA----------------ADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 122 -~~~~~~~~----------------~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
..+.++.. ..+..|.+|+||+. ++||+++-.
T Consensus 408 f~~~~~~~~g~~~~~~~~~~~~~~~~~f~sPDNL~~d~~-G~LwI~eD~ 455 (524)
T PF05787_consen 408 FTWELFLVGGDPTDASGNGSNKCDDNGFASPDNLAFDPD-GNLWIQEDG 455 (524)
T ss_pred eEEEEEEEecCcccccccccCcccCCCcCCCCceEECCC-CCEEEEeCC
Confidence 22233321 12678999999996 778777543
No 95
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.24 E-value=0.1 Score=44.24 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=89.5
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEe---CCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCe
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD---SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRK 100 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d---~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ 100 (232)
.++..+-+|.....+.... .....-+.-+.+..+.... ..+.+|+..+++......+++. ...-...++.|.+.+
T Consensus 174 ~l~~~D~dg~~~~~l~~~~-~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~-~g~~~~P~fspDG~~ 251 (425)
T COG0823 174 ELALGDYDGYNQQKLTDSG-SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNF-NGNNGAPAFSPDGSK 251 (425)
T ss_pred eEEEEccCCcceeEecccC-cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeecc-CCccCCccCCCCCCE
Confidence 6777777765543333221 1111112222233333332 2224699999998888777762 223334567777888
Q ss_pred EEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEEEEecCCCceEEEec
Q psy5751 101 LFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLECMTIRNRVRRKVYS 172 (232)
Q Consensus 101 ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~~~~~~g~~~~~~~~ 172 (232)
|.++....+...|+.+++++.....+.+.. ..-..=.+.+++.+|+++....+ .|++++++|+..+.+..
T Consensus 252 l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~--gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~ 323 (425)
T COG0823 252 LAFSSSRDGSPDIYLMDLDGKNLPRLTNGF--GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF 323 (425)
T ss_pred EEEEECCCCCccEEEEcCCCCcceecccCC--ccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec
Confidence 888876656888999999999866644432 22224467788889988866544 79999999987765533
No 96
>KOG1446|consensus
Probab=97.17 E-value=0.08 Score=41.86 Aligned_cols=209 Identities=12% Similarity=0.012 Sum_probs=123.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEE-eecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTF-DWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~-d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
+.+++|+..++.|.. ...++ .|+.++........++...-..+.-+.+ +..+..||=+...+..|...++.......
T Consensus 17 i~sl~fs~~G~~lit-ss~dD-sl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR 94 (311)
T KOG1446|consen 17 INSLDFSDDGLLLIT-SSEDD-SLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR 94 (311)
T ss_pred eeEEEecCCCCEEEE-ecCCC-eEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence 458899985555554 44455 6888887644433444332234444444 33344555444456788888988877666
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
.+..+-...++|.+.|.+ ..|.+... ...|...++....-+.++. +..+.-.|+||. |.++-+-.+...|...
T Consensus 95 YF~GH~~~V~sL~~sP~~-d~FlS~S~--D~tvrLWDlR~~~cqg~l~---~~~~pi~AfDp~-GLifA~~~~~~~IkLy 167 (311)
T KOG1446|consen 95 YFPGHKKRVNSLSVSPKD-DTFLSSSL--DKTVRLWDLRVKKCQGLLN---LSGRPIAAFDPE-GLIFALANGSELIKLY 167 (311)
T ss_pred EcCCCCceEEEEEecCCC-CeEEeccc--CCeEEeeEecCCCCceEEe---cCCCcceeECCC-CcEEEEecCCCeEEEE
Confidence 666677888999999954 77777654 3457778887666666655 446777899996 6666555555578877
Q ss_pred ecCCC--ce-EEE-ec--CCCceEEEEE--ECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751 161 TIRNR--VR-RKV-YS--NCTYPFGLSI--TDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM 220 (232)
Q Consensus 161 ~~~g~--~~-~~~-~~--~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p 220 (232)
|++.- .. +++ .. ....=..|.+ ++..+.++... +.+..++.. |.....+........-|
T Consensus 168 D~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~-s~~~~lDAf~G~~~~tfs~~~~~~~~~ 235 (311)
T KOG1446|consen 168 DLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA-SFIYLLDAFDGTVKSTFSGYPNAGNLP 235 (311)
T ss_pred EecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC-CcEEEEEccCCcEeeeEeeccCCCCcc
Confidence 77632 11 222 22 1222246666 34455555544 445666654 65555555443333334
No 97
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.16 E-value=0.027 Score=46.43 Aligned_cols=153 Identities=11% Similarity=0.121 Sum_probs=79.0
Q ss_pred CCeEEEEeCC-CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC
Q psy5751 55 NRVLYWTDSQ-MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133 (232)
Q Consensus 55 ~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~ 133 (232)
++.||.++.. ...++.+|++......+.........|..+.+.++.+|+...+ ..+++++++....+.+...+.-.
T Consensus 48 ~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~---~~l~~vdL~T~e~~~vy~~p~~~ 124 (386)
T PF14583_consen 48 RKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG---RSLRRVDLDTLEERVVYEVPDDW 124 (386)
T ss_dssp -EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT---TEEEEEETTT--EEEEEE--TTE
T ss_pred CEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC---CeEEEEECCcCcEEEEEECCccc
Confidence 3555656644 3579999999988877776443444577788888998876533 36999999998877776654222
Q ss_pred CcceEE-EeCCCCEEEEE-EC---------------------CCCcEEEEecCCCceEEEecCCCceEEEEE---ECCEE
Q psy5751 134 LPNSLA-VDFRTDELCWV-DA---------------------DSKSLECMTIRNRVRRKVYSNCTYPFGLSI---TDEKY 187 (232)
Q Consensus 134 ~p~~l~-~d~~~~~Ly~~-d~---------------------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~---~~~~l 187 (232)
..+|-. ++.+ +.+++. .. ...+|..++++++..+++.+.-.+..-+.+ +.+.|
T Consensus 125 ~g~gt~v~n~d-~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li 203 (386)
T PF14583_consen 125 KGYGTWVANSD-CTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPTLI 203 (386)
T ss_dssp EEEEEEEE-TT-SSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEEEEE
T ss_pred ccccceeeCCC-ccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCCCEE
Confidence 233333 3444 333333 11 145899999999988888764333222222 33445
Q ss_pred EEEeCC---C--CcEEEEeCCCCCcceEE
Q psy5751 188 YWTDWK---T--NRIESANKEGERAPSIA 211 (232)
Q Consensus 188 y~td~~---~--~~i~~~~~~g~~~~~i~ 211 (232)
.+|+-+ . .+|+.++.+|+..+.+.
T Consensus 204 ~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~ 232 (386)
T PF14583_consen 204 MFCHEGPWDLVDQRIWTINTDGSNVKKVH 232 (386)
T ss_dssp EEEE-S-TTTSS-SEEEEETTS---EESS
T ss_pred EEeccCCcceeceEEEEEEcCCCcceeee
Confidence 554332 2 37777887777766543
No 98
>KOG0289|consensus
Probab=97.12 E-value=0.12 Score=42.86 Aligned_cols=190 Identities=9% Similarity=0.041 Sum_probs=115.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.++..++.++.|.|++-... -.+.-.-+|+...+.... .--.....++++ .+.||-+...++.+-..|+....-..-
T Consensus 307 ~~ls~h~tgeYllsAs~d~~-w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~ 384 (506)
T KOG0289|consen 307 TGLSLHPTGEYLLSASNDGT-WAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAK 384 (506)
T ss_pred eeeeeccCCcEEEEecCCce-EEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcCCcccccc
Confidence 36777887788888775544 344433445554333322 112467788888 678998988888899999887664444
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC-CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT-DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+..+-.....+++.. +|+-..+... .+.|...++... +...+.... ....+.+.||..+..|-.. ...=+|+.+
T Consensus 385 Fpght~~vk~i~FsE-NGY~Lat~ad--d~~V~lwDLRKl~n~kt~~l~~-~~~v~s~~fD~SGt~L~~~-g~~l~Vy~~ 459 (506)
T KOG0289|consen 385 FPGHTGPVKAISFSE-NGYWLATAAD--DGSVKLWDLRKLKNFKTIQLDE-KKEVNSLSFDQSGTYLGIA-GSDLQVYIC 459 (506)
T ss_pred CCCCCCceeEEEecc-CceEEEEEec--CCeEEEEEehhhcccceeeccc-cccceeEEEcCCCCeEEee-cceeEEEEE
Confidence 445555667899986 7844444443 444666666543 233333332 4567899999987666544 333356555
Q ss_pred ecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEE
Q psy5751 161 TIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIES 199 (232)
Q Consensus 161 ~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~ 199 (232)
.-....-+.+.+ ......++.+-+..-|.......++.+
T Consensus 460 ~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~ 501 (506)
T KOG0289|consen 460 KKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILR 501 (506)
T ss_pred ecccccceeeehhhhcccccceeeecccceEEeeccchhheE
Confidence 443333333322 233456677767777887777776644
No 99
>PTZ00421 coronin; Provisional
Probab=97.06 E-value=0.17 Score=43.70 Aligned_cols=198 Identities=7% Similarity=0.002 Sum_probs=107.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
.+++|++.++.++++-..++ .|...++..... ...+...-..+..+++.+..+.+.++-...+.|...|+..
T Consensus 79 ~~v~fsP~d~~~LaSgS~Dg-tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t 157 (493)
T PTZ00421 79 IDVAFNPFDPQKLFTASEDG-TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER 157 (493)
T ss_pred EEEEEcCCCCCEEEEEeCCC-EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC
Confidence 47888884444444444455 677777753211 1122223356778888876656666767778899999886
Q ss_pred CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE---C
Q psy5751 76 DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD---A 152 (232)
Q Consensus 76 ~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d---~ 152 (232)
......+........+++..+ ++.++.+-.. .++|...++........+....-.....+.+.+..+.|..+- .
T Consensus 158 g~~~~~l~~h~~~V~sla~sp-dG~lLatgs~--Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s 234 (493)
T PTZ00421 158 GKAVEVIKCHSDQITSLEWNL-DGSLLCTTSK--DKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKS 234 (493)
T ss_pred CeEEEEEcCCCCceEEEEEEC-CCCEEEEecC--CCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCC
Confidence 654444444455678899998 4555555433 456877887654332222211011223455555555554432 2
Q ss_pred CCCcEEEEecCCCceE-EEec-CCCceEEE-EEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751 153 DSKSLECMTIRNRVRR-KVYS-NCTYPFGL-SIT--DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 153 ~~~~i~~~~~~g~~~~-~~~~-~~~~p~gl-a~~--~~~ly~td~~~~~i~~~~~~g 204 (232)
..+.|...+++..... .... .......+ .++ .+.||.+-.+.+.|..++...
T Consensus 235 ~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~ 291 (493)
T PTZ00421 235 QQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN 291 (493)
T ss_pred CCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence 2456777777643221 1111 11111222 232 345666554567777777763
No 100
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.05 E-value=0.065 Score=44.95 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=90.8
Q ss_pred EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEE
Q psy5751 14 VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIV 93 (232)
Q Consensus 14 ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia 93 (232)
+....-... .|..++.+|... +.+..++..+..+.++..++.+-+++ ....|++++++....+.+-.+.-.-..+++
T Consensus 374 ~vigt~dgD-~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaN-dr~el~vididngnv~~idkS~~~lItdf~ 450 (668)
T COG4946 374 DVIGTNDGD-KLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVAN-DRFELWVIDIDNGNVRLIDKSEYGLITDFD 450 (668)
T ss_pred eEEeccCCc-eEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEc-CceEEEEEEecCCCeeEecccccceeEEEE
Confidence 333333333 677777777665 44556788999999999777776665 447899999999888777665666678888
Q ss_pred EeCCCCeEEEEEcC-CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 94 VHPYYRKLFWSDWN-RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 94 vd~~~~~ly~~d~~-~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
++|..+++-++--. -=...|...+|+|..+--+... -..--.-|+|+++..||+-..
T Consensus 451 ~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~--ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 451 WHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTP--TAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred EcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCC--cccccCcccCCCCcEEEEEec
Confidence 99866655554311 0023478888998765444332 334445689999999999843
No 101
>KOG0315|consensus
Probab=96.99 E-value=0.11 Score=40.12 Aligned_cols=176 Identities=17% Similarity=0.119 Sum_probs=110.0
Q ss_pred cEEEEEcCCCceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751 24 SIKRAHLDGKNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL 101 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l 101 (232)
.|+.++++..+...+. ....+....+.+...++..| +..+.+.+...|+....+...+. ..+-.+.+.++|....|
T Consensus 62 hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMy-TgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteL 139 (311)
T KOG0315|consen 62 HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMY-TGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTEL 139 (311)
T ss_pred eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEE-ecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceE
Confidence 5777788765543332 23346778888888778777 77788889999988866655555 33556899999999999
Q ss_pred EEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC-ceEEE--ecCCC--c
Q psy5751 102 FWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR-VRRKV--YSNCT--Y 176 (232)
Q Consensus 102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~-~~~~~--~~~~~--~ 176 (232)
+..|.. +.|+..++......-.+..++...-..+++++++.+| .+-...++.++.++-+. ....+ ...++ .
T Consensus 140 is~dqs---g~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml-~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~ 215 (311)
T KOG0315|consen 140 ISGDQS---GNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSML-AAANNKGNCYVWRLLNHQTASELEPVHKFQAHN 215 (311)
T ss_pred EeecCC---CcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEE-EEecCCccEEEEEccCCCccccceEhhheeccc
Confidence 999954 5588877765432222222225667899999985555 45445555555555432 11111 11221 1
Q ss_pred eEEEE--EE-CCEEEEEeCCCCcEEEEeCCCC
Q psy5751 177 PFGLS--IT-DEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 177 p~gla--~~-~~~ly~td~~~~~i~~~~~~g~ 205 (232)
-.++. +- +++...|-+....+...+.++-
T Consensus 216 ~~il~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 216 GHILRCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred ceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence 22333 32 5566666666777888887766
No 102
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=96.86 E-value=0.004 Score=40.01 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
....+... +..||||+++++++.||+++...+.|..+..
T Consensus 45 ~~~~va~g--~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~ 83 (86)
T PF01731_consen 45 EVKVVASG--FSFANGIAISPDKKYLYVASSLAHSIHVYKR 83 (86)
T ss_pred EeEEeecc--CCCCceEEEcCCCCEEEEEeccCCeEEEEEe
Confidence 34444554 8899999999999999999999888877654
No 103
>KOG0285|consensus
Probab=96.80 E-value=0.13 Score=41.59 Aligned_cols=119 Identities=18% Similarity=0.156 Sum_probs=84.0
Q ss_pred CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 41 TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 41 ~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
..+.+...+++|+ .+..|.+....+.|-..|+.....+..+.......+++++++.--+||-+.- ..+|...+++.
T Consensus 149 gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge---dk~VKCwDLe~ 224 (460)
T KOG0285|consen 149 GHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE---DKQVKCWDLEY 224 (460)
T ss_pred hccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC---CCeeEEEechh
Confidence 4567899999999 4667778888888999999988877777667788899999976566665543 45688888875
Q ss_pred CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
....--... .+....+|++.|.-+.| ++-.....+...|++..
T Consensus 225 nkvIR~YhG-HlS~V~~L~lhPTldvl-~t~grDst~RvWDiRtr 267 (460)
T KOG0285|consen 225 NKVIRHYHG-HLSGVYCLDLHPTLDVL-VTGGRDSTIRVWDIRTR 267 (460)
T ss_pred hhhHHHhcc-ccceeEEEeccccceeE-EecCCcceEEEeeeccc
Confidence 543222222 27778899999974444 55455555555556543
No 104
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.80 E-value=0.41 Score=44.04 Aligned_cols=195 Identities=8% Similarity=-0.038 Sum_probs=110.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-----ce--eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGK-----NV--EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-----~~--~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
.+++|++.++.|..+ ..++ .|...+++.. .. .......-....+++..+..+....+-...+.|...|+..
T Consensus 487 ~~i~fs~dg~~latg-g~D~-~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~ 564 (793)
T PLN00181 487 CAIGFDRDGEFFATA-GVNK-KIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVAR 564 (793)
T ss_pred EEEEECCCCCEEEEE-eCCC-EEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCC
Confidence 478899855544443 3444 6777776421 10 0111111234566666654344445555678899999876
Q ss_pred CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 76 DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 76 ~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
......+..+.....+++++|.++.++++-.. .+.|...++........+.. ......+.+.+.++.++.+-...+
T Consensus 565 ~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~--Dg~v~iWd~~~~~~~~~~~~--~~~v~~v~~~~~~g~~latgs~dg 640 (793)
T PLN00181 565 SQLVTEMKEHEKRVWSIDYSSADPTLLASGSD--DGSVKLWSINQGVSIGTIKT--KANICCVQFPSESGRSLAFGSADH 640 (793)
T ss_pred CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcC--CCEEEEEECCCCcEEEEEec--CCCeEEEEEeCCCCCEEEEEeCCC
Confidence 55444444455567899998766666666543 45677777764433222222 234566777665566666667788
Q ss_pred cEEEEecCCCce--EEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 156 SLECMTIRNRVR--RKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 156 ~i~~~~~~g~~~--~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
.|...+++.... ..+.........+++..+..++|-...+.|...+..
T Consensus 641 ~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 641 KVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred eEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCC
Confidence 888888875432 222222233345666544445555555666666543
No 105
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=96.80 E-value=0.21 Score=40.74 Aligned_cols=160 Identities=15% Similarity=0.130 Sum_probs=93.9
Q ss_pred EEEEEeCCCCEEEEE-EcCC---CCcEEEEEcCCC-----cee-----EEEeCC---C----CCccEEEEeecCCeEEEE
Q psy5751 3 IGITVDCVEGQVYYS-SVAD---KSSIKRAHLDGK-----NVE-----DVITTN---I----RSPEGLTFDWVNRVLYWT 61 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~-d~~~---~~~i~~~~~~g~-----~~~-----~~~~~~---~----~~p~gl~~d~~~~~ly~~ 61 (232)
.||++++..+.+|.. |-.. .++++.+.++.. ... .+.... + ..++||++ ..++.+||+
T Consensus 23 Sgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~-~~~g~~~is 101 (326)
T PF13449_consen 23 SGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAV-PPDGSFWIS 101 (326)
T ss_pred eeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEE-ecCCCEEEE
Confidence 378999756655444 3333 124777666541 110 111110 1 27789999 458899999
Q ss_pred eCCC------CeEEEEeCCCCCCEEE-EeC-------------CCCCceEEEEeCCCCeEEEEEcCC---C---C-----
Q psy5751 62 DSQM------DTISMANLNDDQPKVI-VSK-------------DLVNPRGIVVHPYYRKLFWSDWNR---S---G----- 110 (232)
Q Consensus 62 d~~~------~~I~~~~~~g~~~~~~-~~~-------------~~~~p~~iavd~~~~~ly~~d~~~---~---~----- 110 (232)
+... .+|++++.+|...+.+ +.. ......+||+.+.++.||.+.... + .
T Consensus 102 ~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~ 181 (326)
T PF13449_consen 102 SEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNG 181 (326)
T ss_pred eCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccccccC
Confidence 9999 9999999998875544 221 223446999999666688764321 1 1
Q ss_pred --CcEEEEeCCCCC---cEEEEEcC------CCCCcceEEEeCCCCEEEEEECC-------CCcEEEEecCC
Q psy5751 111 --PKIEWSNLDGTD---REIFLKAA------DLKLPNSLAVDFRTDELCWVDAD-------SKSLECMTIRN 164 (232)
Q Consensus 111 --~~I~~~~~~g~~---~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~-------~~~i~~~~~~g 164 (232)
.+|.+.+..... .+-..... ....++.++.-++ ++|++.+.. ..+|+++++..
T Consensus 182 ~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d-~~lLvLER~~~~~~~~~~ri~~v~l~~ 252 (326)
T PF13449_consen 182 SPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPD-GRLLVLERDFSPGTGNYKRIYRVDLSD 252 (326)
T ss_pred ceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECC-CcEEEEEccCCCCccceEEEEEEEccc
Confidence 356666654311 12111111 1345666766665 668888765 34788888763
No 106
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=96.76 E-value=0.23 Score=40.57 Aligned_cols=117 Identities=21% Similarity=0.197 Sum_probs=77.8
Q ss_pred eEEEEEeCCCCEEEEEEcCC------CCcEEEEEcCCCceeEE-Ee-------------CCCCCccEEEEeecCCeEEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVAD------KSSIKRAHLDGKNVEDV-IT-------------TNIRSPEGLTFDWVNRVLYWT 61 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~------~~~i~~~~~~g~~~~~~-~~-------------~~~~~p~gl~~d~~~~~ly~~ 61 (232)
++||++ ..++.+||++-.. . +|++++.+|...+.+ +. ......++|++.+.++.||.+
T Consensus 87 ~Egi~~-~~~g~~~is~E~~~~~~~~p-~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~ 164 (326)
T PF13449_consen 87 PEGIAV-PPDGSFWISSEGGRTGGIPP-RIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA 164 (326)
T ss_pred hhHeEE-ecCCCEEEEeCCccCCCCCC-EEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence 468889 5699999999988 7 999999998764444 11 123577999999988878887
Q ss_pred eCCC---------------CeEEEEeCCC--CCCEE-EEe-C------CCCCceEEEEeCCCCeEEEEEcC-----CCCC
Q psy5751 62 DSQM---------------DTISMANLND--DQPKV-IVS-K------DLVNPRGIVVHPYYRKLFWSDWN-----RSGP 111 (232)
Q Consensus 62 d~~~---------------~~I~~~~~~g--~~~~~-~~~-~------~~~~p~~iavd~~~~~ly~~d~~-----~~~~ 111 (232)
-... -+|+..+... ..... ... . ....+.+++..+ ++.|++.+-. ....
T Consensus 165 ~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~-d~~lLvLER~~~~~~~~~~ 243 (326)
T PF13449_consen 165 MESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALP-DGRLLVLERDFSPGTGNYK 243 (326)
T ss_pred ECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEEC-CCcEEEEEccCCCCccceE
Confidence 5442 3577777653 22222 222 2 345667777775 6778887643 1245
Q ss_pred cEEEEeCCCC
Q psy5751 112 KIEWSNLDGT 121 (232)
Q Consensus 112 ~I~~~~~~g~ 121 (232)
+|+++++...
T Consensus 244 ri~~v~l~~a 253 (326)
T PF13449_consen 244 RIYRVDLSDA 253 (326)
T ss_pred EEEEEEcccc
Confidence 7777776543
No 107
>KOG0285|consensus
Probab=96.66 E-value=0.27 Score=39.96 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=71.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++++|+. +..|.+...+. .|...++........+...+...+++++....-.|| +-...+.|-..|+.....-.-.
T Consensus 155 r~vavdP~-n~wf~tgs~Dr-tikIwDlatg~LkltltGhi~~vr~vavS~rHpYlF-s~gedk~VKCwDLe~nkvIR~Y 231 (460)
T KOG0285|consen 155 RSVAVDPG-NEWFATGSADR-TIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLF-SAGEDKQVKCWDLEYNKVIRHY 231 (460)
T ss_pred EEEeeCCC-ceeEEecCCCc-eeEEEEcccCeEEEeecchhheeeeeeecccCceEE-EecCCCeeEEEechhhhhHHHh
Confidence 57899995 66677777777 899999998777566665678999999998766676 4444567777888765532222
Q ss_pred eCCCCCceEEEEeCCCCeEEEE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWS 104 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~ 104 (232)
...+.....++++|.-+.|+-.
T Consensus 232 hGHlS~V~~L~lhPTldvl~t~ 253 (460)
T KOG0285|consen 232 HGHLSGVYCLDLHPTLDVLVTG 253 (460)
T ss_pred ccccceeEEEeccccceeEEec
Confidence 2578888889999855555443
No 108
>KOG4378|consensus
Probab=96.58 E-value=0.25 Score=41.77 Aligned_cols=189 Identities=11% Similarity=0.090 Sum_probs=105.5
Q ss_pred CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEE-eCCCCeEEEEeCCCCCCEEEEe-CCCCCc
Q psy5751 12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT-DSQMDTISMANLNDDQPKVIVS-KDLVNP 89 (232)
Q Consensus 12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~-d~~~~~I~~~~~~g~~~~~~~~-~~~~~p 89 (232)
..+|....+.+..+..+++...-..+.+...-..+.++.+.|.. =|++ -...+.|............-+. .+....
T Consensus 90 ~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~D--eyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsv 167 (673)
T KOG4378|consen 90 QSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTD--EYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSV 167 (673)
T ss_pred cceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCc--ceeEEeccCCcEEEEecccCccccceecCCCCeE
Confidence 34555544444234444444221111122222455566666532 2333 2334566666665555444443 223333
Q ss_pred eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEE
Q psy5751 90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK 169 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~ 169 (232)
+-+-+++..+.|..+... .+.+...+..|.....-....+-....||+|.+.+..|+++-....+|..+|........
T Consensus 168 Rll~ys~skr~lL~~asd--~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~ 245 (673)
T KOG4378|consen 168 RLLRYSPSKRFLLSIASD--KGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD 245 (673)
T ss_pred EEeecccccceeeEeecc--CCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence 456677777888777655 455777777766543333332233457999999999999998888899998877432211
Q ss_pred EecCCCceE-EEEE-ECCEEEEEeCCCCcEEEEeCCCC
Q psy5751 170 VYSNCTYPF-GLSI-TDEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 170 ~~~~~~~p~-gla~-~~~~ly~td~~~~~i~~~~~~g~ 205 (232)
-+ .-.+|. .+|+ +.|....+-..+++|+-.+..+.
T Consensus 246 ~l-~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 246 RL-TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRST 282 (673)
T ss_pred ee-eecCCcceeeecCCceEEEeecCCceEEEEecccC
Confidence 11 123454 5666 35666666666788887777643
No 109
>KOG0272|consensus
Probab=96.56 E-value=0.26 Score=40.67 Aligned_cols=136 Identities=8% Similarity=-0.015 Sum_probs=86.4
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
-....++++.+ .+.|..+......=.+.|+....+..++..+.....+++.+| +|+..-|-..-...+|+...+....
T Consensus 303 s~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~~l 380 (459)
T KOG0272|consen 303 SKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRSEL 380 (459)
T ss_pred ccccceeEecC-CCceeeccCccchhheeecccCcEEEEecccccceeeEeECC-CceEEeecCCCCcEEEeeecccccc
Confidence 46788999998 566766655544344558887777788888888899999998 8987777654334455554444331
Q ss_pred cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc-eEEEecCCCceEEEEEE
Q psy5751 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV-RRKVYSNCTYPFGLSIT 183 (232)
Q Consensus 123 ~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~-~~~~~~~~~~p~gla~~ 183 (232)
-.+... -.-.+.+.+++..|...++-+..+.+.....++.. .+.++..-....++++.
T Consensus 381 y~ipAH---~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis 439 (459)
T KOG0272|consen 381 YTIPAH---SNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDIS 439 (459)
T ss_pred eecccc---cchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEec
Confidence 111111 34567889998778877887777766655555433 23344444445566553
No 110
>KOG4378|consensus
Probab=96.54 E-value=0.41 Score=40.60 Aligned_cols=159 Identities=14% Similarity=0.069 Sum_probs=99.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
..++.|++.+..|--...+. .|....+......+.+..+ -....=|.+.+-.+.|..+-...+.+...|..|..+..
T Consensus 124 vt~v~YN~~DeyiAsvs~gG--diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~ 201 (673)
T KOG4378|consen 124 VTYVDYNNTDEYIASVSDGG--DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIF 201 (673)
T ss_pred eEEEEecCCcceeEEeccCC--cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCccc
Confidence 35677777555543333332 4665555544433333222 22334466677778888777778899999999987665
Q ss_pred EEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 81 IVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 81 ~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
-+.+ +-+-..||++.|.+..|+++-.- .-+|..++.........+.. -..-..++|.+. |....+-...++|..
T Consensus 202 ~~~~~HsAP~~gicfspsne~l~vsVG~--Dkki~~yD~~s~~s~~~l~y--~~Plstvaf~~~-G~~L~aG~s~G~~i~ 276 (673)
T KOG4378|consen 202 HASEAHSAPCRGICFSPSNEALLVSVGY--DKKINIYDIRSQASTDRLTY--SHPLSTVAFSEC-GTYLCAGNSKGELIA 276 (673)
T ss_pred chhhhccCCcCcceecCCccceEEEecc--cceEEEeecccccccceeee--cCCcceeeecCC-ceEEEeecCCceEEE
Confidence 5543 33344799999988888887643 35688777664433222221 123467888886 555556566789999
Q ss_pred EecCCCce
Q psy5751 160 MTIRNRVR 167 (232)
Q Consensus 160 ~~~~g~~~ 167 (232)
.|+++.+.
T Consensus 277 YD~R~~k~ 284 (673)
T KOG4378|consen 277 YDMRSTKA 284 (673)
T ss_pred EecccCCC
Confidence 99998754
No 111
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.49 E-value=0.31 Score=38.67 Aligned_cols=184 Identities=10% Similarity=0.132 Sum_probs=110.0
Q ss_pred eCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC---CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-
Q psy5751 8 DCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT---NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS- 83 (232)
Q Consensus 8 d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~---~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~- 83 (232)
.-..+..|++|+.+. +..+++.......+... .-...+.+++. ++.-|+++... -+..+|......-+++.
T Consensus 135 ~vsGn~aYVadlddg--fLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~-GL~ivDVSnp~sPvli~~ 209 (370)
T COG5276 135 YVSGNYAYVADLDDG--FLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDG-GLTIVDVSNPHSPVLIGS 209 (370)
T ss_pred EecCCEEEEeeccCc--EEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCC-CeEEEEccCCCCCeEEEE
Confidence 335789999998766 66677765543333221 11223567777 68889888764 46677776655444444
Q ss_pred CCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceE-EEeCCCCEEEEEECCCCcEEEEe
Q psy5751 84 KDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSL-AVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 84 ~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l-~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
-+.. ...+..+. .++.|.++.+.. +...+.++.....++..-+-..|.++ .+--.+++.|++|...+ +-.++
T Consensus 210 ~n~g~g~~sv~vs--dnr~y~vvy~eg---vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~g-l~~id 283 (370)
T COG5276 210 YNTGPGTYSVSVS--DNRAYLVVYDEG---VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKG-LPIID 283 (370)
T ss_pred EecCCceEEEEec--CCeeEEEEcccc---eEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccC-ceeEe
Confidence 2222 44555555 788999987743 56666666654444443225566655 22223589999987544 33333
Q ss_pred cCCCceEEEecCCC----ceEEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751 162 IRNRVRRKVYSNCT----YPFGLSITDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 162 ~~g~~~~~~~~~~~----~p~gla~~~~~ly~td~~~~~i~~~~~ 202 (232)
.+......+.+.+. ...|+.+.++.+|+++...+.+.-+.+
T Consensus 284 isnp~spfl~ss~~t~g~~a~gi~ay~~y~yiadkn~g~vV~~s~ 328 (370)
T COG5276 284 ISNPPSPFLSSSLDTAGYQAAGIRAYGNYNYIADKNTGAVVDASP 328 (370)
T ss_pred ccCCCCCchhccccCCCccccceEEecCeeEeccCCceEEEeCCC
Confidence 43322223333222 356899999999999988776654443
No 112
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.40 E-value=0.3 Score=37.45 Aligned_cols=179 Identities=12% Similarity=0.084 Sum_probs=100.6
Q ss_pred CCEEEEEEcCCCCcEEEEEc-CCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeC-CCCCCEEEEe-C--
Q psy5751 11 EGQVYYSSVADKSSIKRAHL-DGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANL-NDDQPKVIVS-K-- 84 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~-~-- 84 (232)
++.+|+++ ..+ .|+.++. +|....+.-.. .+..+ ..++ ++.+|+.... ++|+.++. +|...-.... .
T Consensus 36 ~~~v~~~~-~~~-~l~~~d~~tG~~~W~~~~~~~~~~~--~~~~--~~~v~v~~~~-~~l~~~d~~tG~~~W~~~~~~~~ 108 (238)
T PF13360_consen 36 GGRVYVAS-GDG-NLYALDAKTGKVLWRFDLPGPISGA--PVVD--GGRVYVGTSD-GSLYALDAKTGKVLWSIYLTSSP 108 (238)
T ss_dssp TTEEEEEE-TTS-EEEEEETTTSEEEEEEECSSCGGSG--EEEE--TTEEEEEETT-SEEEEEETTTSCEEEEEEE-SSC
T ss_pred CCEEEEEc-CCC-EEEEEECCCCCEEEEeeccccccce--eeec--ccccccccce-eeeEecccCCcceeeeecccccc
Confidence 67788775 334 6888887 45433333222 11222 2444 6788888744 48889984 4444333222 1
Q ss_pred C--CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC--C--------cceEEEeCCCCEEEEEEC
Q psy5751 85 D--LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK--L--------PNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 85 ~--~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~--~--------p~~l~~d~~~~~Ly~~d~ 152 (232)
. ...+...+++ ++.+|+... .+.|..+++......--.....-. . ...+.++ ++.+|++..
T Consensus 109 ~~~~~~~~~~~~~--~~~~~~~~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~ 181 (238)
T PF13360_consen 109 PAGVRSSSSPAVD--GDRLYVGTS---SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS--DGRVYVSSG 181 (238)
T ss_dssp TCSTB--SEEEEE--TTEEEEEET---CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC--TTEEEEECC
T ss_pred ccccccccCceEe--cCEEEEEec---cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE--CCEEEEEcC
Confidence 1 2234456666 778888874 356888886644332222111001 0 1122223 468988865
Q ss_pred CCCcEEEEecCCCceEEEecCCCceEE-EEEECCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 153 DSKSLECMTIRNRVRRKVYSNCTYPFG-LSITDEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 153 ~~~~i~~~~~~g~~~~~~~~~~~~p~g-la~~~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
.. .+..++...+++. .......+.+ ....++.||++. ..+.|..+++.++.
T Consensus 182 ~g-~~~~~d~~tg~~~-w~~~~~~~~~~~~~~~~~l~~~~-~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 182 DG-RVVAVDLATGEKL-WSKPISGIYSLPSVDGGTLYVTS-SDGRLYALDLKTGK 233 (238)
T ss_dssp TS-SEEEEETTTTEEE-EEECSS-ECECEECCCTEEEEEE-TTTEEEEEETTTTE
T ss_pred CC-eEEEEECCCCCEE-EEecCCCccCCceeeCCEEEEEe-CCCEEEEEECCCCC
Confidence 44 4667788877644 4333555566 455799999999 67899999987443
No 113
>KOG0310|consensus
Probab=96.29 E-value=0.56 Score=39.45 Aligned_cols=217 Identities=9% Similarity=0.039 Sum_probs=123.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|-. +++|+.+-...+ .|..+++.....-..+...-....-+-+.+..+.++.+-.....+...++++.....-+
T Consensus 72 ~s~~fR~-DG~LlaaGD~sG-~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l 149 (487)
T KOG0310|consen 72 YSVDFRS-DGRLLAAGDESG-HVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAEL 149 (487)
T ss_pred eEEEeec-CCeEEEccCCcC-cEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEe
Confidence 4667765 788877766656 78888855421101111111233445566667777776666666667788887754344
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
..+-...+..++.|.++.|+++... .++|...+.......+.-.+ ...|---.+--.+|-++.+ .+.+.|...|+
T Consensus 150 ~~htDYVR~g~~~~~~~hivvtGsY--Dg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsgs~ias-AgGn~vkVWDl 224 (487)
T KOG0310|consen 150 SGHTDYVRCGDISPANDHIVVTGSY--DGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSGSLIAS-AGGNSVKVWDL 224 (487)
T ss_pred cCCcceeEeeccccCCCeEEEecCC--CceEEEEEeccCCceeEEec--CCCceeeEEEcCCCCEEEE-cCCCeEEEEEe
Confidence 4566778889999999999999865 56677776665532322222 3344333333333555544 44566777778
Q ss_pred CCCceEEEecC---CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 163 RNRVRRKVYSN---CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 163 ~g~~~~~~~~~---~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
-++.+ .+... ......|.+. ++.-..+-.-.+.|..++. +..+++. ...-++-...+++.++.|
T Consensus 225 ~~G~q-ll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~--t~~Kvv~-s~~~~~pvLsiavs~dd~ 292 (487)
T KOG0310|consen 225 TTGGQ-LLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDT--TNYKVVH-SWKYPGPVLSIAVSPDDQ 292 (487)
T ss_pred cCCce-ehhhhhcccceEEEEEeecCCceEeecccccceEEEEc--cceEEEE-eeecccceeeEEecCCCc
Confidence 74433 23333 3334566664 3344444444566777773 3333221 122244567788888776
No 114
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=96.27 E-value=0.033 Score=30.18 Aligned_cols=41 Identities=15% Similarity=0.260 Sum_probs=30.0
Q ss_pred CCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE
Q psy5751 142 FRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182 (232)
Q Consensus 142 ~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~ 182 (232)
+++++||+++...+.|..++........-......|.++++
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 35688999999999999998865544333445677888775
No 115
>KOG1446|consensus
Probab=96.24 E-value=0.44 Score=37.81 Aligned_cols=174 Identities=13% Similarity=0.072 Sum_probs=104.6
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW 103 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~ 103 (232)
.|+-+.+.....-..+...-..+.+|.+.+.+ ..|.+....+.|...|+....+..++. +..+.-.|+|| .|.+|.
T Consensus 81 tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~--~~~~pi~AfDp-~GLifA 156 (311)
T KOG1446|consen 81 TIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLN--LSGRPIAAFDP-EGLIFA 156 (311)
T ss_pred ceEEEEeecCceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEe--cCCCcceeECC-CCcEEE
Confidence 44444444433323333334577889999865 678888888899999999777777774 34455688998 898888
Q ss_pred EEcCCCCCcEEEEeCC---CCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec---CCCc
Q psy5751 104 SDWNRSGPKIEWSNLD---GTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS---NCTY 176 (232)
Q Consensus 104 ~d~~~~~~~I~~~~~~---g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---~~~~ 176 (232)
+..+.+ .|...++. ....+..... .....=+.|.++++++.|.++.........-.++|.....+.. ....
T Consensus 157 ~~~~~~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~ 234 (311)
T KOG1446|consen 157 LANGSE--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNL 234 (311)
T ss_pred EecCCC--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCc
Confidence 877643 56665543 3333333222 2244557999999988887776544333333456765444422 2334
Q ss_pred eEEEEE-ECCEEEEEeCCCCcEEEEeCC
Q psy5751 177 PFGLSI-TDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 177 p~gla~-~~~~ly~td~~~~~i~~~~~~ 203 (232)
|-+.++ -++....+-...++|..-+..
T Consensus 235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 235 PLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred ceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 444444 244444554555666666654
No 116
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=96.19 E-value=0.6 Score=38.79 Aligned_cols=122 Identities=17% Similarity=0.189 Sum_probs=73.3
Q ss_pred CCCCCccEEEEee--cCCeEEEE-eCCCCeEEEEeC--CCCC--CEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCC
Q psy5751 41 TNIRSPEGLTFDW--VNRVLYWT-DSQMDTISMANL--NDDQ--PKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGP 111 (232)
Q Consensus 41 ~~~~~p~gl~~d~--~~~~ly~~-d~~~~~I~~~~~--~g~~--~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~ 111 (232)
..+..|.|+++.. ..+.+|.. ....+.+..+.+ ++.. ...++. .-...+.|+++|...+.||+.+-. .
T Consensus 153 ~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvgEE~---~ 229 (381)
T PF02333_consen 153 TDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVGEED---V 229 (381)
T ss_dssp -SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEEETT---T
T ss_pred cccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEecCc---c
Confidence 4567899999964 34555543 334466665544 3332 122222 234589999999999999999954 3
Q ss_pred cEEEEeCCCC--CcEEEE-EcC---CCCCcceEEEeC---CCCEEEEEECCCCcEEEEecCCC
Q psy5751 112 KIEWSNLDGT--DREIFL-KAA---DLKLPNSLAVDF---RTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 112 ~I~~~~~~g~--~~~~~~-~~~---~~~~p~~l~~d~---~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
-||++..+.. ....++ ... ...-..||++-. ..++|.+++.+.+....++..+.
T Consensus 230 GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 230 GIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 4999988733 222333 211 123567999954 24689999988888888877764
No 117
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.12 E-value=1.1 Score=41.27 Aligned_cols=194 Identities=9% Similarity=0.025 Sum_probs=105.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+++|++..+....+-..++ .|...++........+........++++.+..+.++++-...+.|...++........+.
T Consensus 537 ~l~~~~~~~~~las~~~Dg-~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~ 615 (793)
T PLN00181 537 GICWNSYIKSQVASSNFEG-VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 615 (793)
T ss_pred eEEeccCCCCEEEEEeCCC-eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 4566554344444444455 788888875443333333345678888886566677787778899999987654433333
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
.......+.+.+..+.++.+... .+.|...++.............-.....+.+. ++.. +++-+..+.|...+++
T Consensus 616 -~~~~v~~v~~~~~~g~~latgs~--dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~-lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 616 -TKANICCVQFPSESGRSLAFGSA--DHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSST-LVSSSTDNTLKLWDLS 690 (793)
T ss_pred -cCCCeEEEEEeCCCCCEEEEEeC--CCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCE-EEEEECCCEEEEEeCC
Confidence 22345566665545666555433 45688887764432111111112344567775 3344 4454556667666665
Q ss_pred CC-------ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 164 NR-------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 164 g~-------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.. ....+.........+++. .+.+..+-...+.|...+..
T Consensus 691 ~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 691 MSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred CCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence 21 112222222223445553 34455555556667766654
No 118
>PTZ00421 coronin; Provisional
Probab=96.06 E-value=0.87 Score=39.50 Aligned_cols=196 Identities=12% Similarity=0.019 Sum_probs=106.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
..++|++..+.++++-..++ .|...++........+........++++.+.+ .+.++-...+.|...|+........+
T Consensus 129 ~~l~f~P~~~~iLaSgs~Dg-tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG-~lLatgs~Dg~IrIwD~rsg~~v~tl 206 (493)
T PTZ00421 129 GIVSFHPSAMNVLASAGADM-VVNVWDVERGKAVEVIKCHSDQITSLEWNLDG-SLLCTTSKDKKLNIIDPRDGTIVSSV 206 (493)
T ss_pred EEEEeCcCCCCEEEEEeCCC-EEEEEECCCCeEEEEEcCCCCceEEEEEECCC-CEEEEecCCCEEEEEECCCCcEEEEE
Confidence 36788886555555555556 78888888554333333333567888888844 45567777789999998754432222
Q ss_pred eCCC-CCceEEEEeCCCCeEEEEEcC-CCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 83 SKDL-VNPRGIVVHPYYRKLFWSDWN-RSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 83 ~~~~-~~p~~iavd~~~~~ly~~d~~-~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.... .........+..+.++.+... ...+.|...++.......-... .......-..+|+++..||.+-.+.+.|..
T Consensus 207 ~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iri 286 (493)
T PTZ00421 207 EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRC 286 (493)
T ss_pred ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEE
Confidence 2121 122344455545555544322 1245677777654332211111 101122233568887788877666788888
Q ss_pred EecCCCceEEEec-CCCce-EEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751 160 MTIRNRVRRKVYS-NCTYP-FGLSITDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 160 ~~~~g~~~~~~~~-~~~~p-~gla~~~~~ly~td~~~~~i~~~~~ 202 (232)
.++.........+ ....| .|+++.-.+ -.|.....|.|+-+
T Consensus 287 wdl~~~~~~~~~~~~s~~~~~g~~~~pk~--~~dv~~~Ei~r~~~ 329 (493)
T PTZ00421 287 FELMNERLTFCSSYSSVEPHKGLCMMPKW--SLDTRKCEIARFYA 329 (493)
T ss_pred EEeeCCceEEEeeccCCCCCcceEecccc--cccccceeeeEEEE
Confidence 8887654332222 22223 466654322 23444455555444
No 119
>KOG0318|consensus
Probab=96.00 E-value=0.86 Score=38.93 Aligned_cols=178 Identities=12% Similarity=0.097 Sum_probs=102.7
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE-eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV-SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW 115 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~ 115 (232)
.++....+.+..|++.+.+..|| +-...+.|...+........+. ..+.+...+|+.+. .+.||-..+. .++.+
T Consensus 314 ~~i~GHnK~ITaLtv~~d~~~i~-SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~-~~~~~t~g~D---d~l~~ 388 (603)
T KOG0318|consen 314 KVISGHNKSITALTVSPDGKTIY-SGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASE-SGELFTIGWD---DTLRV 388 (603)
T ss_pred heecccccceeEEEEcCCCCEEE-eeccCceEEEEecCCccccccccccccceEEEEeecC-CCcEEEEecC---CeEEE
Confidence 44445567889999998787777 5445588998887666554443 45667888999985 6889888876 34777
Q ss_pred EeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeC
Q psy5751 116 SNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDW 192 (232)
Q Consensus 116 ~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~ 192 (232)
.++.+.. ....+.- -.+|-++++..+++.+.++-... |.... +.+.... ..-.-.|.++|+. ++..+..-.
T Consensus 389 ~~~~~~~~t~~~~~~l--g~QP~~lav~~d~~~avv~~~~~--iv~l~-~~~~~~~-~~~~y~~s~vAv~~~~~~vaVGG 462 (603)
T KOG0318|consen 389 ISLKDNGYTKSEVVKL--GSQPKGLAVLSDGGTAVVACISD--IVLLQ-DQTKVSS-IPIGYESSAVAVSPDGSEVAVGG 462 (603)
T ss_pred EecccCcccccceeec--CCCceeEEEcCCCCEEEEEecCc--EEEEe-cCCccee-eccccccceEEEcCCCCEEEEec
Confidence 7764433 2222222 56899999999866766654222 22221 1111111 1122335566764 333333344
Q ss_pred CCCcEEEEeCCCCCcceEEeccCCcceeEEEEE
Q psy5751 193 KTNRIESANKEGERAPSIALDMMGTTYMYGIAA 225 (232)
Q Consensus 193 ~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~ 225 (232)
..++|......|...+...........+.-|+.
T Consensus 463 ~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vay 495 (603)
T KOG0318|consen 463 QDGKVHVYSLSGDELKEEAKLLEHRAAITDVAY 495 (603)
T ss_pred ccceEEEEEecCCcccceeeeecccCCceEEEE
Confidence 556676666665443322222333444444443
No 120
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=95.91 E-value=0.028 Score=36.13 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=33.4
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN 74 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~ 74 (232)
+.+..++..|.||++++.++.||+++...+.|.++..+
T Consensus 47 ~~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 47 KVVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred EEeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 45667889999999999999999999999999988754
No 121
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.86 E-value=0.72 Score=38.07 Aligned_cols=116 Identities=9% Similarity=0.120 Sum_probs=70.9
Q ss_pred eEEEEeCCCCCCEEEEe----CCCCCceEEEEe-CCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEe
Q psy5751 67 TISMANLNDDQPKVIVS----KDLVNPRGIVVH-PYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVD 141 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~----~~~~~p~~iavd-~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d 141 (232)
.+..|+......+.+.. .-+.....+... +.++.++|.....+-.+|+.++.++...+.+.... ..--.-+.+|
T Consensus 211 ~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~-~~V~~i~~~d 289 (353)
T PF00930_consen 211 DLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGD-WEVTSILGWD 289 (353)
T ss_dssp EEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SS-S-EEEEEEEE
T ss_pred EEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCc-eeecccceEc
Confidence 56677887666665554 123233345443 44555555443445678999999998866544443 2222457889
Q ss_pred CCCCEEEEEECC----CCcEEEEecC-CCceEEEecCCCceEEEEEE
Q psy5751 142 FRTDELCWVDAD----SKSLECMTIR-NRVRRKVYSNCTYPFGLSIT 183 (232)
Q Consensus 142 ~~~~~Ly~~d~~----~~~i~~~~~~-g~~~~~~~~~~~~p~gla~~ 183 (232)
..++.||++-.. ..++++++++ ++..+.+-.....-..+++.
T Consensus 290 ~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~S 336 (353)
T PF00930_consen 290 EDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFS 336 (353)
T ss_dssp CTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-
T ss_pred CCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEEC
Confidence 999999999765 4589999999 77665554332222455553
No 122
>KOG0266|consensus
Probab=95.85 E-value=1 Score=38.65 Aligned_cols=192 Identities=12% Similarity=0.105 Sum_probs=115.5
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEc-CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHL-DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.++.|.+ ++...++-..+. +|...++ +.....+++......+.++++.+.+ ++.++-...+.|...+..+..+...
T Consensus 207 ~~~~fs~-d~~~l~s~s~D~-tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~ 283 (456)
T KOG0266|consen 207 SDVAFSP-DGSYLLSGSDDK-TLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRK 283 (456)
T ss_pred eeeEECC-CCcEEEEecCCc-eEEEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEe
Confidence 3677777 444444545555 7777777 3323334444455778999999977 6777888888999999998666666
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE--EEEEcCCCCCc---ceEEEeCCCCEEEEEECCCCc
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE--IFLKAADLKLP---NSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~--~~~~~~~~~~p---~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
+..+.....++++.+ ++.++++... .+.|...++...... ..+.. ...+ +.+.+++....| ++-...+.
T Consensus 284 l~~hs~~is~~~f~~-d~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~fsp~~~~l-l~~~~d~~ 357 (456)
T KOG0266|consen 284 LKGHSDGISGLAFSP-DGNLLVSASY--DGTIRVWDLETGSKLCLKLLSG--AENSAPVTSVQFSPNGKYL-LSASLDRT 357 (456)
T ss_pred eeccCCceEEEEECC-CCCEEEEcCC--CccEEEEECCCCceeeeecccC--CCCCCceeEEEECCCCcEE-EEecCCCe
Confidence 665666778899997 5666666533 466888888877743 22222 2333 678888875555 44455556
Q ss_pred EEEEecCCCce-EEEecCCC---ceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 157 LECMTIRNRVR-RKVYSNCT---YPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 157 i~~~~~~g~~~-~~~~~~~~---~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+...++..... ........ -.+..... .+...++-...+.|...+..
T Consensus 358 ~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~ 409 (456)
T KOG0266|consen 358 LKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSS 409 (456)
T ss_pred EEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCC
Confidence 77767764332 22222111 11111112 44444444445666666665
No 123
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.76 E-value=1 Score=37.80 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=77.5
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCC
Q psy5751 55 NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLK 133 (232)
Q Consensus 55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~ 133 (232)
++.||++.. .+.++.+|..... .+.......+..++++ ++.||+... .++++.++....... .-... .-.
T Consensus 256 ~~~vy~~~~-~g~l~ald~~tG~--~~W~~~~~~~~~~~~~--~~~vy~~~~---~g~l~ald~~tG~~~-W~~~~~~~~ 326 (394)
T PRK11138 256 GGVVYALAY-NGNLVALDLRSGQ--IVWKREYGSVNDFAVD--GGRIYLVDQ---NDRVYALDTRGGVEL-WSQSDLLHR 326 (394)
T ss_pred CCEEEEEEc-CCeEEEEECCCCC--EEEeecCCCccCcEEE--CCEEEEEcC---CCeEEEEECCCCcEE-EcccccCCC
Confidence 578888775 3678888876543 2333334444556676 789999874 456888887654321 11111 001
Q ss_pred CcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCC--CceEEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751 134 LPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNC--TYPFGLSITDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 134 ~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~--~~p~gla~~~~~ly~td~~~~~i~~~~~ 202 (232)
.....++. +++||+.+. .+.+..++.+.++...-.... ....+-++.+++||+... ++.|+.++.
T Consensus 327 ~~~sp~v~--~g~l~v~~~-~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~-~G~l~~~~~ 393 (394)
T PRK11138 327 LLTAPVLY--NGYLVVGDS-EGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQAR-DGTVYAITR 393 (394)
T ss_pred cccCCEEE--CCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeC-CceEEEEeC
Confidence 11222232 489998864 578888888765432222111 112233457889999865 466776653
No 124
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=95.74 E-value=0.077 Score=28.64 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=30.7
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEe
Q psy5751 54 VNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVH 95 (232)
Q Consensus 54 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd 95 (232)
.++.||+++...+.|..+|.........+.. ...|.+|+++
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~~ 42 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAVS 42 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEeC
Confidence 3678999999999999999866554444443 5689998874
No 125
>KOG0315|consensus
Probab=95.73 E-value=0.7 Score=35.81 Aligned_cols=192 Identities=11% Similarity=0.097 Sum_probs=111.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~ 80 (232)
..++.|.....++ ++...++ .+...++....-+..+... .....+.+.+...-|+..|. ++.|.+.|+....+ ..
T Consensus 86 VtaVgF~~dgrWM-yTgseDg-t~kIWdlR~~~~qR~~~~~-spVn~vvlhpnQteLis~dq-sg~irvWDl~~~~c~~~ 161 (311)
T KOG0315|consen 86 VTAVGFQCDGRWM-YTGSEDG-TVKIWDLRSLSCQRNYQHN-SPVNTVVLHPNQTELISGDQ-SGNIRVWDLGENSCTHE 161 (311)
T ss_pred eEEEEEeecCeEE-EecCCCc-eEEEEeccCcccchhccCC-CCcceEEecCCcceEEeecC-CCcEEEEEccCCccccc
Confidence 3466677644444 4554555 6777777765444455443 56788889987777876664 47899999877643 45
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEE-cCCCCCcc----eEEEeCCCCEEEEEECCC
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLK-AADLKLPN----SLAVDFRTDELCWVDADS 154 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~-~~~~~~p~----~l~~d~~~~~Ly~~d~~~ 154 (232)
++.+.......++++| .|.+..+..++ +..+..++-+.. ...+.. .. ++..+ -.-++|++..| .+-+..
T Consensus 162 liPe~~~~i~sl~v~~-dgsml~a~nnk--G~cyvW~l~~~~~~s~l~P~~k-~~ah~~~il~C~lSPd~k~l-at~ssd 236 (311)
T KOG0315|consen 162 LIPEDDTSIQSLTVMP-DGSMLAAANNK--GNCYVWRLLNHQTASELEPVHK-FQAHNGHILRCLLSPDVKYL-ATCSSD 236 (311)
T ss_pred cCCCCCcceeeEEEcC-CCcEEEEecCC--ccEEEEEccCCCccccceEhhh-eecccceEEEEEECCCCcEE-EeecCC
Confidence 5556666778999998 56666665553 445555543322 221111 11 22222 34567775554 444556
Q ss_pred CcEEEEecCCC-ceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 155 KSLECMTIRNR-VRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 155 ~~i~~~~~~g~-~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
..+...+.++- +.+...+ .-.+-++.++- ++...+|-...+.+..-+.
T Consensus 237 ktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 237 KTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDL 287 (311)
T ss_pred ceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccc
Confidence 66666667765 3333333 44678888884 4444455444444433333
No 126
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.67 E-value=0.66 Score=35.08 Aligned_cols=174 Identities=13% Similarity=0.071 Sum_probs=97.5
Q ss_pred EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCC----CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIR----SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~----~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
|+.++. +.+|.+--..+ ++|++.++.+... +.+..+. -.+|++.- ++.+|......+.-+..|.+....
T Consensus 50 GL~~~~--g~i~esTG~yg~S~ir~~~L~~gq~--~~s~~l~~~~~FgEGit~~--gd~~y~LTw~egvaf~~d~~t~~~ 123 (262)
T COG3823 50 GLEYLD--GHILESTGLYGFSKIRVSDLTTGQE--IFSEKLAPDTVFGEGITKL--GDYFYQLTWKEGVAFKYDADTLEE 123 (262)
T ss_pred ceeeeC--CEEEEeccccccceeEEEeccCceE--EEEeecCCccccccceeec--cceEEEEEeccceeEEEChHHhhh
Confidence 566653 57776643222 5899999996542 3333222 23454433 667777766667777777766543
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEcC--CCCCcceEEEeCCCCEEEEEECCC
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKAA--DLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~~--~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
--.++ --..-+|++-| +..|.-+|.. ..+...+...- ..++.+... ....-|-| ..-.|.||=--+.+
T Consensus 124 lg~~~-y~GeGWgLt~d--~~~LimsdGs---atL~frdP~tfa~~~~v~VT~~g~pv~~LNEL--E~VdG~lyANVw~t 195 (262)
T COG3823 124 LGRFS-YEGEGWGLTSD--DKNLIMSDGS---ATLQFRDPKTFAELDTVQVTDDGVPVSKLNEL--EWVDGELYANVWQT 195 (262)
T ss_pred hcccc-cCCcceeeecC--CcceEeeCCc---eEEEecCHHHhhhcceEEEEECCeecccccce--eeeccEEEEeeeee
Confidence 32232 22345788877 5566666632 33444333221 112222211 11222222 22237787666778
Q ss_pred CcEEEEecCCCceEEEec-------------CCCceEEEEEE--CCEEEEEe
Q psy5751 155 KSLECMTIRNRVRRKVYS-------------NCTYPFGLSIT--DEKYYWTD 191 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~-------------~~~~p~gla~~--~~~ly~td 191 (232)
.+|.+++++.+++....+ +..-++|||.+ .+++|+|-
T Consensus 196 ~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 196 TRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 899999999887765532 23357899985 67899874
No 127
>KOG4649|consensus
Probab=95.67 E-value=0.78 Score=35.90 Aligned_cols=105 Identities=7% Similarity=-0.100 Sum_probs=52.9
Q ss_pred EEEeecCCeEEEEeCCCC-eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE
Q psy5751 49 LTFDWVNRVLYWTDSQMD-TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL 127 (232)
Q Consensus 49 l~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~ 127 (232)
+.+...++.|||.+..++ .++....-+... ..-..|+..|.+|...-+ +..+..+.... -.+-
T Consensus 66 VV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk-----------~~a~~d~~~glIycgshd---~~~yalD~~~~--~cVy 129 (354)
T KOG4649|consen 66 VVLGCYSGGLYFLCVKTGSQIWNFVILETVK-----------VRAQCDFDGGLIYCGSHD---GNFYALDPKTY--GCVY 129 (354)
T ss_pred EEEEEccCcEEEEEecchhheeeeeehhhhc-----------cceEEcCCCceEEEecCC---CcEEEeccccc--ceEE
Confidence 556666778888887776 455443322211 112344445666655432 23444433322 1111
Q ss_pred EcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751 128 KAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV 170 (232)
Q Consensus 128 ~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~ 170 (232)
... ....-.+-++++..+.||++- ..+.+.++.......+++
T Consensus 130 kskcgG~~f~sP~i~~g~~sly~a~-t~G~vlavt~~~~~~~~~ 172 (354)
T KOG4649|consen 130 KSKCGGGTFVSPVIAPGDGSLYAAI-TAGAVLAVTKNPYSSTEF 172 (354)
T ss_pred ecccCCceeccceecCCCceEEEEe-ccceEEEEccCCCCccee
Confidence 111 011223345677668999885 467777777765533333
No 128
>KOG4441|consensus
Probab=95.64 E-value=1.5 Score=38.87 Aligned_cols=209 Identities=12% Similarity=0.075 Sum_probs=121.2
Q ss_pred CCEEEEEEcCC-C----CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-----CeEEEEeCCCCCCEE
Q psy5751 11 EGQVYYSSVAD-K----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-----DTISMANLNDDQPKV 80 (232)
Q Consensus 11 ~~~ly~~d~~~-~----~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~ 80 (232)
++.||++--.+ + ..+.+++........ +.+-...-.++++-..++.||.....+ ..+.++|.....=..
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~ 410 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP 410 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccc
Confidence 56888886544 2 367888888766433 333223334555666689999886553 467788877765443
Q ss_pred EEeCCCCC-ceEEEEeCCCCeEEEEEcCCC----CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--
Q psy5751 81 IVSKDLVN-PRGIVVHPYYRKLFWSDWNRS----GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD-- 153 (232)
Q Consensus 81 ~~~~~~~~-p~~iavd~~~~~ly~~d~~~~----~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~-- 153 (232)
+.. +.. -.+.++-..+|.||..-.... -..+.+++.....=+.+.... ..-.+..+-..++.||+.=..
T Consensus 411 va~--m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~--~~R~~~g~a~~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 411 VAP--MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMN--TRRSGFGVAVLNGKIYVVGGFDG 486 (571)
T ss_pred cCC--CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcc--cccccceEEEECCEEEEECCccC
Confidence 332 111 223333334899999864211 145667766654433332221 112233344446899998332
Q ss_pred ---CCcEEEEecCCCceEEEec--CCCceEEEEEECCEEEEEeCCC-----CcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751 154 ---SKSLECMTIRNRVRRKVYS--NCTYPFGLSITDEKYYWTDWKT-----NRIESANKEGERAPSIALDMMGTTYMYGI 223 (232)
Q Consensus 154 ---~~~i~~~~~~g~~~~~~~~--~~~~p~gla~~~~~ly~td~~~-----~~i~~~~~~g~~~~~i~~~~~~~~~p~gi 223 (232)
...|++.++....-+.+.. ......|++..++.+|+.-... ..|...++....++.... ........|+
T Consensus 487 ~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~~~~~-~~~~~~~~~~ 565 (571)
T KOG4441|consen 487 TSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDTWTEVTE-PESGRGGAGV 565 (571)
T ss_pred CCccceEEEEcCCCCceeEcccCccccccccEEEECCEEEEEecccCccccceeEEcCCCCCceeeCCC-ccccccCcce
Confidence 3458899998876666632 2333458888999999985533 367777777777765543 3223333444
Q ss_pred EE
Q psy5751 224 AA 225 (232)
Q Consensus 224 ~~ 225 (232)
++
T Consensus 566 ~~ 567 (571)
T KOG4441|consen 566 AV 567 (571)
T ss_pred EE
Confidence 44
No 129
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.53 E-value=1.1 Score=36.62 Aligned_cols=148 Identities=20% Similarity=0.198 Sum_probs=82.5
Q ss_pred EEEEcCCCCcEEEEEcCCCceeE-EEeC---CCCCc--cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC-
Q psy5751 15 YYSSVADKSSIKRAHLDGKNVED-VITT---NIRSP--EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV- 87 (232)
Q Consensus 15 y~~d~~~~~~i~~~~~~g~~~~~-~~~~---~~~~p--~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~- 87 (232)
|.+-+.++ ++..+.++....++ .... ....| ..-+++..++.+||..+. +.|+..++.|...+..-.-++.
T Consensus 150 F~~lC~DG-sl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~-G~v~~~dlsg~~~~~~~~~~~~t 227 (342)
T PF06433_consen 150 FSMLCGDG-SLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE-GNVYSADLSGDSAKFGKPWSLLT 227 (342)
T ss_dssp EEEEETTS-CEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTT-SEEEEEEETTSSEEEEEEEESS-
T ss_pred eEEEecCC-ceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecC-CEEEEEeccCCcccccCcccccC
Confidence 44666677 88888887322211 1111 11111 122344456789987765 8999999999875443321110
Q ss_pred --------Cc---eEEEEeCCCCeEEEEEcCCC-------CCcEEEEeCCCCCcEEEEEcCCCC-CcceEEEeCCCC-EE
Q psy5751 88 --------NP---RGIVVHPYYRKLFWSDWNRS-------GPKIEWSNLDGTDREIFLKAADLK-LPNSLAVDFRTD-EL 147 (232)
Q Consensus 88 --------~p---~~iavd~~~~~ly~~d~~~~-------~~~I~~~~~~g~~~~~~~~~~~~~-~p~~l~~d~~~~-~L 147 (232)
+| .-+|+++..++||+..-... ...|+.+++....+..-+. +. ...+|++..+.. .|
T Consensus 228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~---l~~~~~Si~Vsqd~~P~L 304 (342)
T PF06433_consen 228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP---LEHPIDSIAVSQDDKPLL 304 (342)
T ss_dssp HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE---EEEEESEEEEESSSS-EE
T ss_pred ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe---CCCccceEEEccCCCcEE
Confidence 22 24889988999998742111 2357777776554322222 22 234777777544 56
Q ss_pred EEEECCCCcEEEEecCCCce
Q psy5751 148 CWVDADSKSLECMTIRNRVR 167 (232)
Q Consensus 148 y~~d~~~~~i~~~~~~g~~~ 167 (232)
|-++..++.+..+|...++.
T Consensus 305 ~~~~~~~~~l~v~D~~tGk~ 324 (342)
T PF06433_consen 305 YALSAGDGTLDVYDAATGKL 324 (342)
T ss_dssp EEEETTTTEEEEEETTT--E
T ss_pred EEEcCCCCeEEEEeCcCCcE
Confidence 65666667777777765543
No 130
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=95.48 E-value=1.4 Score=37.45 Aligned_cols=131 Identities=14% Similarity=0.131 Sum_probs=89.4
Q ss_pred eEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcc
Q psy5751 57 VLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPN 136 (232)
Q Consensus 57 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~ 136 (232)
.+.+.+.....+.+.+.+|...+.+- ..+.+..++.+++.++.+-+++ ++.+|+.++++..+.+.+-... ..--.
T Consensus 373 ~~vigt~dgD~l~iyd~~~~e~kr~e-~~lg~I~av~vs~dGK~~vvaN---dr~el~vididngnv~~idkS~-~~lIt 447 (668)
T COG4946 373 GDVIGTNDGDKLGIYDKDGGEVKRIE-KDLGNIEAVKVSPDGKKVVVAN---DRFELWVIDIDNGNVRLIDKSE-YGLIT 447 (668)
T ss_pred ceEEeccCCceEEEEecCCceEEEee-CCccceEEEEEcCCCcEEEEEc---CceEEEEEEecCCCeeEecccc-cceeE
Confidence 44455555568889999887765554 4888999999998666676666 3567999999988877765443 55667
Q ss_pred eEEEeCCCCEEEEEEC---CCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC
Q psy5751 137 SLAVDFRTDELCWVDA---DSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW 192 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~---~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~ 192 (232)
++++++.+.++=++=. .+..|...+++|.+.-.+..-...-++=|++ ...||+-..
T Consensus 448 df~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 448 DFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred EEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEec
Confidence 7888887777655422 1456888889987765554433333444553 567887654
No 131
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.44 E-value=1.1 Score=37.85 Aligned_cols=63 Identities=11% Similarity=0.111 Sum_probs=35.1
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc------------------CCCCCcceEEEeCCCCEEEE
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA------------------ADLKLPNSLAVDFRTDELCW 149 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~------------------~~~~~p~~l~~d~~~~~Ly~ 149 (232)
-+.+|.++...++||++.|. .+.|.++++.......++.. .....|+=|.++.+++||||
T Consensus 313 LitDI~iSlDDrfLYvs~W~--~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv 390 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSNWL--HGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV 390 (461)
T ss_dssp ----EEE-TTS-EEEEEETT--TTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred ceEeEEEccCCCEEEEEccc--CCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence 35788888889999999998 56788888765543333221 01236888999999999999
Q ss_pred EEC
Q psy5751 150 VDA 152 (232)
Q Consensus 150 ~d~ 152 (232)
|++
T Consensus 391 TnS 393 (461)
T PF05694_consen 391 TNS 393 (461)
T ss_dssp E--
T ss_pred Eee
Confidence 976
No 132
>KOG0279|consensus
Probab=95.43 E-value=0.98 Score=35.53 Aligned_cols=153 Identities=14% Similarity=0.084 Sum_probs=95.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCC-CCeEEEEeCCCCCCEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ-MDTISMANLNDDQPKVI 81 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~ 81 (232)
+++|++ +++-.++-..++ .|...+.-|.-.-++.... ......+.+.|.....|+.... .+.+.+.|+++...+.-
T Consensus 110 sva~s~-dn~qivSGSrDk-Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~ 187 (315)
T KOG0279|consen 110 SVAFST-DNRQIVSGSRDK-TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTT 187 (315)
T ss_pred EEEecC-CCceeecCCCcc-eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhc
Confidence 455555 333333333444 5555555554433333333 5678888898866455555544 56677889998776655
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
+-......+.++++| +|.|..+ +...++++..+++-+.. +..-......+.++|.|. +.+.+-.....|...+
T Consensus 188 ~~gh~~~v~t~~vSp-DGslcas--Ggkdg~~~LwdL~~~k~--lysl~a~~~v~sl~fspn--rywL~~at~~sIkIwd 260 (315)
T KOG0279|consen 188 FIGHSGYVNTVTVSP-DGSLCAS--GGKDGEAMLWDLNEGKN--LYSLEAFDIVNSLCFSPN--RYWLCAATATSIKIWD 260 (315)
T ss_pred cccccccEEEEEECC-CCCEEec--CCCCceEEEEEccCCce--eEeccCCCeEeeEEecCC--ceeEeeccCCceEEEe
Confidence 555666788999998 6777555 33468899999886544 222121556789999984 5555555555677777
Q ss_pred cCCC
Q psy5751 162 IRNR 165 (232)
Q Consensus 162 ~~g~ 165 (232)
++..
T Consensus 261 l~~~ 264 (315)
T KOG0279|consen 261 LESK 264 (315)
T ss_pred ccch
Confidence 7754
No 133
>KOG0266|consensus
Probab=95.40 E-value=1.5 Score=37.57 Aligned_cols=192 Identities=12% Similarity=0.101 Sum_probs=109.9
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC-CCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL-NDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~ 80 (232)
.+.|.+..+. .++-..+. .+......+.. ....+......+.++++-+.+. ..++-.....|...+. +......
T Consensus 164 ~~~fs~~g~~-l~~~~~~~-~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~-~l~s~s~D~tiriwd~~~~~~~~~ 240 (456)
T KOG0266|consen 164 CVDFSPDGRA-LAAASSDG-LIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGS-YLLSGSDDKTLRIWDLKDDGRNLK 240 (456)
T ss_pred EEEEcCCCCe-EEEccCCC-cEEEeecccccchhhccccccccceeeeEECCCCc-EEEEecCCceEEEeeccCCCeEEE
Confidence 3556664445 33333333 45555554333 2122233446788899988554 4456666677888887 4433333
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
.+........+++++|.. .+.++-.. .+.|...++.+......+... -..-+++++.+++ .++++-+..+.|...
T Consensus 241 ~l~gH~~~v~~~~f~p~g-~~i~Sgs~--D~tvriWd~~~~~~~~~l~~h-s~~is~~~f~~d~-~~l~s~s~d~~i~vw 315 (456)
T KOG0266|consen 241 TLKGHSTYVTSVAFSPDG-NLLVSGSD--DGTVRIWDVRTGECVRKLKGH-SDGISGLAFSPDG-NLLVSASYDGTIRVW 315 (456)
T ss_pred EecCCCCceEEEEecCCC-CEEEEecC--CCcEEEEeccCCeEEEeeecc-CCceEEEEECCCC-CEEEEcCCCccEEEE
Confidence 444566677999999955 66666544 345776777653333333322 4567889999984 555555778899999
Q ss_pred ecCCCceE--EEecCCCc--eE-EEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 161 TIRNRVRR--KVYSNCTY--PF-GLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 161 ~~~g~~~~--~~~~~~~~--p~-gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+..++... ........ |. .+.+. ++...++-+..+.+...+..
T Consensus 316 d~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~ 364 (456)
T KOG0266|consen 316 DLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR 364 (456)
T ss_pred ECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc
Confidence 99877632 23332222 44 44443 44444555544455554444
No 134
>KOG4328|consensus
Probab=95.38 E-value=1.1 Score=37.67 Aligned_cols=197 Identities=15% Similarity=0.162 Sum_probs=111.1
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--E
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--K 79 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~ 79 (232)
+|.|.+.+-.-+++...++ .|.-.++++...++++.. .-....++.+....+.+|+.+.-. ...++|+..... .
T Consensus 239 ~l~F~P~n~s~i~ssSyDG-tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~ 316 (498)
T KOG4328|consen 239 GLKFSPANTSQIYSSSYDG-TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYE 316 (498)
T ss_pred ceEecCCChhheeeeccCc-eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc-ceEEEEeecCCccch
Confidence 5666664443333443445 688888887665555544 334556677776778888887653 455555433322 1
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe-CCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN-LDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~-~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
.+.- +-....++++.|...+++.|...-+..+||-++ +.+.. ..++.. ..-...+...++|.++.| +|....++|
T Consensus 317 ~~~l-h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~-sp~lst~~HrrsV~sAyFSPs~gtl-~TT~~D~~I 393 (498)
T KOG4328|consen 317 NLRL-HKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKA-SPFLSTLPHRRSVNSAYFSPSGGTL-LTTCQDNEI 393 (498)
T ss_pred hhhh-hhcccceeecCCCCchheeecccCcceeeeehhhhcCCC-CcceecccccceeeeeEEcCCCCce-EeeccCCce
Confidence 1111 122778999999888888877655567787544 33332 222322 223456788999998995 454556666
Q ss_pred EEEecC-----CCceEEEecC---CC--ceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 158 ECMTIR-----NRVRRKVYSN---CT--YPFGLSIT--DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 158 ~~~~~~-----g~~~~~~~~~---~~--~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
..++-. -....++... .. .|+-.+++ ...+++... ...|-.++..|++
T Consensus 394 Rv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~-~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 394 RVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRY-PRPIDVFDGNGGQ 453 (498)
T ss_pred EEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEecc-CcceeEEcCCCCE
Confidence 665542 1112233221 12 24444554 334444444 4668888887655
No 135
>KOG0318|consensus
Probab=95.33 E-value=1.6 Score=37.37 Aligned_cols=215 Identities=9% Similarity=0.061 Sum_probs=114.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC---CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT---NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~---~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
...+.|.+ ++.+|.+--.++ +|+.++=.....--.+.. .-..+.+|+-.+....+- +-.....+...+......
T Consensus 193 V~~VRysP-DG~~Fat~gsDg-ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~-T~SaDkt~KIWdVs~~sl 269 (603)
T KOG0318|consen 193 VNCVRYSP-DGSRFATAGSDG-KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFL-TVSADKTIKIWDVSTNSL 269 (603)
T ss_pred eeeEEECC-CCCeEEEecCCc-cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEE-EecCCceEEEEEeeccce
Confidence 34677887 577777776666 777665443322112221 123555566655454443 444445555555544433
Q ss_pred EEEEe--CCC-CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 79 KVIVS--KDL-VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 79 ~~~~~--~~~-~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
...+. +.. .+..|+. +.++.|...... +.|--.+.+......++.. .......|++.+++..||-+ +..+
T Consensus 270 v~t~~~~~~v~dqqvG~l--Wqkd~lItVSl~---G~in~ln~~d~~~~~~i~G-HnK~ITaLtv~~d~~~i~Sg-syDG 342 (603)
T KOG0318|consen 270 VSTWPMGSTVEDQQVGCL--WQKDHLITVSLS---GTINYLNPSDPSVLKVISG-HNKSITALTVSPDGKTIYSG-SYDG 342 (603)
T ss_pred EEEeecCCchhceEEEEE--EeCCeEEEEEcC---cEEEEecccCCChhheecc-cccceeEEEEcCCCCEEEee-ccCc
Confidence 22221 111 1112221 113333332222 2233333332232222222 25667899999998888765 6688
Q ss_pred cEEEEecCCCceEEEe--cCCCceEEEEEEC-CEEEEEeCCCCcEEEEeCCCCCcceEE-eccCCcceeEEEEEEcCC
Q psy5751 156 SLECMTIRNRVRRKVY--SNCTYPFGLSITD-EKYYWTDWKTNRIESANKEGERAPSIA-LDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~--~~~~~p~gla~~~-~~ly~td~~~~~i~~~~~~g~~~~~i~-~~~~~~~~p~gi~~~~~~ 229 (232)
+|...+...+....+. .......+++..+ +.|+-+-|. ..+.+++..+.....-. .+. ...|.|+|+.+++
T Consensus 343 ~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~D-d~l~~~~~~~~~~t~~~~~~l--g~QP~~lav~~d~ 417 (603)
T KOG0318|consen 343 HINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWD-DTLRVISLKDNGYTKSEVVKL--GSQPKGLAVLSDG 417 (603)
T ss_pred eEEEEecCCccccccccccccceEEEEeecCCCcEEEEecC-CeEEEEecccCcccccceeec--CCCceeEEEcCCC
Confidence 8888887755443342 2455567889876 777777775 56888876533322111 111 4467899998874
No 136
>KOG4441|consensus
Probab=95.08 E-value=2.3 Score=37.71 Aligned_cols=172 Identities=15% Similarity=0.127 Sum_probs=106.0
Q ss_pred cEEEEeecCCeEEEEeCCC------CeEEEEeCCCCCCEEEEeCCCCCce---EEEEeCCCCeEEEEEcCC---CCCcEE
Q psy5751 47 EGLTFDWVNRVLYWTDSQM------DTISMANLNDDQPKVIVSKDLVNPR---GIVVHPYYRKLFWSDWNR---SGPKIE 114 (232)
Q Consensus 47 ~gl~~d~~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~~~~p~---~iavd~~~~~ly~~d~~~---~~~~I~ 114 (232)
.++++- ++.||++...+ ..+.++|.....=..+ ..+..++ ++++- +|.||.....- .-..++
T Consensus 326 ~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~--a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE 399 (571)
T KOG4441|consen 326 VGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPV--APMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVE 399 (571)
T ss_pred ccEEEE--CCEEEEEccccCCCcccceEEEecCCCCceecc--CCccCccccceeEEE--CCEEEEEeccccccccccEE
Confidence 445554 67999986554 4677777766542122 2344442 55555 89999985321 134577
Q ss_pred EEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC------CCCcEEEEecCCCceEEEec--CCCceEEEEEECCE
Q psy5751 115 WSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA------DSKSLECMTIRNRVRRKVYS--NCTYPFGLSITDEK 186 (232)
Q Consensus 115 ~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~------~~~~i~~~~~~g~~~~~~~~--~~~~p~gla~~~~~ 186 (232)
+++.....=..+.... ..-.+.++-..+++||.+-. ....+.+.++....-+.+.. .-..-.|+++.++.
T Consensus 400 ~YDp~~~~W~~va~m~--~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~ 477 (571)
T KOG4441|consen 400 CYDPVTNKWTPVAPML--TRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGK 477 (571)
T ss_pred EecCCCCcccccCCCC--cceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCE
Confidence 8877766544444332 23345555555699999843 23678899998776665544 22333578889999
Q ss_pred EEEEeCCC-----CcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751 187 YYWTDWKT-----NRIESANKEGERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 187 ly~td~~~-----~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
||+.-... ..|.+.++...+++.+. +........|+++..
T Consensus 478 iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~-~m~~~rs~~g~~~~~ 522 (571)
T KOG4441|consen 478 IYVVGGFDGTSALSSVERYDPETNQWTMVA-PMTSPRSAVGVVVLG 522 (571)
T ss_pred EEEECCccCCCccceEEEEcCCCCceeEcc-cCccccccccEEEEC
Confidence 99985533 34888999988888663 233344455666554
No 137
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.06 E-value=1.8 Score=36.46 Aligned_cols=203 Identities=12% Similarity=0.153 Sum_probs=112.3
Q ss_pred EEEeCCCCEEEEEEcCCC---------CcEEEEEcCCCcee-EEEeCCCCCcc---EEEEeecCCeEEEEeCC--C-CeE
Q psy5751 5 ITVDCVEGQVYYSSVADK---------SSIKRAHLDGKNVE-DVITTNIRSPE---GLTFDWVNRVLYWTDSQ--M-DTI 68 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~---------~~i~~~~~~g~~~~-~~~~~~~~~p~---gl~~d~~~~~ly~~d~~--~-~~I 68 (232)
+.|...+..+|++..... .+|++..+.....+ +++-.....+. ++.....++.|++.-.. + ..+
T Consensus 175 ~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v 254 (414)
T PF02897_consen 175 VSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEV 254 (414)
T ss_dssp EEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEE
T ss_pred EEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeE
Confidence 788887789999986552 14777777655433 23333223333 67777777887765433 3 579
Q ss_pred EEEeCCCC-----CCEEEEeCCCCCceEEEEeCCCCeEEE-EEcCCCCCcEEEEeCCCCCc---E-EEEEcCCCCCcceE
Q psy5751 69 SMANLNDD-----QPKVIVSKDLVNPRGIVVHPYYRKLFW-SDWNRSGPKIEWSNLDGTDR---E-IFLKAADLKLPNSL 138 (232)
Q Consensus 69 ~~~~~~g~-----~~~~~~~~~~~~p~~iavd~~~~~ly~-~d~~~~~~~I~~~~~~g~~~---~-~~~~~~~~~~p~~l 138 (232)
+.++++.. ..+.+.. ........+-. .++.+|+ ++.+...++|.+++++.... . +++....-..-.++
T Consensus 255 ~~~d~~~~~~~~~~~~~l~~-~~~~~~~~v~~-~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~ 332 (414)
T PF02897_consen 255 YLLDLDDGGSPDAKPKLLSP-REDGVEYYVDH-HGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDV 332 (414)
T ss_dssp EEEECCCTTTSS-SEEEEEE-SSSS-EEEEEE-ETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEE
T ss_pred EEEeccccCCCcCCcEEEeC-CCCceEEEEEc-cCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEE
Confidence 99998874 3344444 22223222222 2777775 66666688999999987763 3 44443212234566
Q ss_pred EEeCCCCEEEEEECC--CCcEEEEecC-CCceEEE-ecCCCceEEEEE--ECCEEEEEeC--CC-CcEEEEeCCCCCcce
Q psy5751 139 AVDFRTDELCWVDAD--SKSLECMTIR-NRVRRKV-YSNCTYPFGLSI--TDEKYYWTDW--KT-NRIESANKEGERAPS 209 (232)
Q Consensus 139 ~~d~~~~~Ly~~d~~--~~~i~~~~~~-g~~~~~~-~~~~~~p~gla~--~~~~ly~td~--~~-~~i~~~~~~g~~~~~ 209 (232)
.+. +++|++.... ..+|..++++ +.....+ .-......++.. .++.++++-. .. ..+++++......+.
T Consensus 333 ~~~--~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~ 410 (414)
T PF02897_consen 333 SLF--KDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTL 410 (414)
T ss_dssp EEE--TTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEE
T ss_pred EEE--CCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEE
Confidence 555 4678777554 4588888998 5444333 222222234432 2455555532 22 477777777666554
Q ss_pred EE
Q psy5751 210 IA 211 (232)
Q Consensus 210 i~ 211 (232)
++
T Consensus 411 ~k 412 (414)
T PF02897_consen 411 LK 412 (414)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 138
>KOG0292|consensus
Probab=95.04 E-value=0.67 Score=42.22 Aligned_cols=154 Identities=12% Similarity=0.081 Sum_probs=104.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
-|++|++..-++ .+...++ .|+..+-. |.-..+.. +.-...+|+++++ .+-||++......|-+.+++...+...
T Consensus 13 KglsFHP~rPwI-LtslHsG-~IQlWDYRM~tli~rFd-eHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclft 88 (1202)
T KOG0292|consen 13 KGLSFHPKRPWI-LTSLHSG-VIQLWDYRMGTLIDRFD-EHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFT 88 (1202)
T ss_pred cceecCCCCCEE-EEeecCc-eeeeehhhhhhHHhhhh-ccCCccceeeecC-CCCeEEecCCccEEEEEecccceehhh
Confidence 488999954444 4555555 78776655 32222222 2335779999998 678999988888999999987665544
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
+-.++...+.+.+++.-=++.-+. +.-.|+..+........++..- -++..+-.|+|. ..|.++-+-...|...|
T Consensus 89 L~GHlDYVRt~~FHheyPWIlSAS---DDQTIrIWNwqsr~~iavltGH-nHYVMcAqFhpt-EDlIVSaSLDQTVRVWD 163 (1202)
T KOG0292|consen 89 LLGHLDYVRTVFFHHEYPWILSAS---DDQTIRIWNWQSRKCIAVLTGH-NHYVMCAQFHPT-EDLIVSASLDQTVRVWD 163 (1202)
T ss_pred hccccceeEEeeccCCCceEEEcc---CCCeEEEEeccCCceEEEEecC-ceEEEeeccCCc-cceEEEecccceEEEEe
Confidence 446888888888887555444333 2345888888777666555543 566677778886 56667767666777777
Q ss_pred cCCC
Q psy5751 162 IRNR 165 (232)
Q Consensus 162 ~~g~ 165 (232)
+.|.
T Consensus 164 isGL 167 (1202)
T KOG0292|consen 164 ISGL 167 (1202)
T ss_pred ecch
Confidence 7654
No 139
>KOG0310|consensus
Probab=95.03 E-value=1.9 Score=36.45 Aligned_cols=183 Identities=12% Similarity=0.056 Sum_probs=116.5
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
-+-|.+.++.++.+-..+. .+...++++...+.-+...-......++.+.++.+.++..-.+.|...|...... .+.+
T Consensus 115 ~~~f~~~d~t~l~s~sDd~-v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~-~v~e 192 (487)
T KOG0310|consen 115 VTKFSPQDNTMLVSGSDDK-VVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS-RVVE 192 (487)
T ss_pred EEEecccCCeEEEecCCCc-eEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc-eeEE
Confidence 4567888889888876666 6777788876653334444467888899998999999998899999999877642 2333
Q ss_pred CCCCCc-eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 84 KDLVNP-RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 84 ~~~~~p-~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
-+-..| ..+..-| .|.++.+..+ +.+...++-++...+...........+|.+..++.+|+-+ +-.++|..++.
T Consensus 193 lnhg~pVe~vl~lp-sgs~iasAgG---n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~-sLD~~VKVfd~ 267 (487)
T KOG0310|consen 193 LNHGCPVESVLALP-SGSLIASAGG---NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSG-SLDRHVKVFDT 267 (487)
T ss_pred ecCCCceeeEEEcC-CCCEEEEcCC---CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeec-ccccceEEEEc
Confidence 122344 4555554 7777777754 4577788875544333222125667899999888888754 44677777764
Q ss_pred CCCceEEEec-CCCce-EEEEEE-CCEEEEEeCCCC
Q psy5751 163 RNRVRRKVYS-NCTYP-FGLSIT-DEKYYWTDWKTN 195 (232)
Q Consensus 163 ~g~~~~~~~~-~~~~p-~gla~~-~~~ly~td~~~~ 195 (232)
+ +-+++.+ ..+.| .++++. ++.-.+.-..++
T Consensus 268 t--~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 268 T--NYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred c--ceEEEEeeecccceeeEEecCCCceEEEecccc
Confidence 3 4444544 44444 467763 333333333333
No 140
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=94.99 E-value=1.1 Score=33.62 Aligned_cols=123 Identities=7% Similarity=-0.021 Sum_probs=77.9
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC-CCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS-QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLF 102 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly 102 (232)
.|+.++..+.....+-...-..+..++..+.++.+.+... ....|...+.++.....+ .....+.+..+|.++.|.
T Consensus 40 ~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~---~~~~~n~i~wsP~G~~l~ 116 (194)
T PF08662_consen 40 ELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSF---GTQPRNTISWSPDGRFLV 116 (194)
T ss_pred EEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEee---cCCCceEEEECCCCCEEE
Confidence 5777766665544443332234788888887777766543 345788888874443333 234556899999777777
Q ss_pred EEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 103 WSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 103 ~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
.+..+...+.+...+.+ ..+.+.... ......++.+|++..+..+.+
T Consensus 117 ~~g~~n~~G~l~~wd~~--~~~~i~~~~-~~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 117 LAGFGNLNGDLEFWDVR--KKKKISTFE-HSDATDVEWSPDGRYLATATT 163 (194)
T ss_pred EEEccCCCcEEEEEECC--CCEEeeccc-cCcEEEEEEcCCCCEEEEEEe
Confidence 66655335678887777 334444433 456789999999777665543
No 141
>KOG0281|consensus
Probab=94.95 E-value=0.29 Score=39.59 Aligned_cols=144 Identities=11% Similarity=0.093 Sum_probs=90.6
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
.....+.+| +++.++.+....|.+.|.+...+ ++++. .-....++.+. +|.+.-+... ..|.+.+|+...
T Consensus 238 GSVLCLqyd---~rviisGSSDsTvrvWDv~tge~l~tlih-HceaVLhlrf~--ng~mvtcSkD---rsiaVWdm~sps 308 (499)
T KOG0281|consen 238 GSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGEPLNTLIH-HCEAVLHLRFS--NGYMVTCSKD---RSIAVWDMASPT 308 (499)
T ss_pred CcEEeeecc---ceEEEecCCCceEEEEeccCCchhhHHhh-hcceeEEEEEe--CCEEEEecCC---ceeEEEeccCch
Confidence 344444444 34778888888899988776553 44443 44556677777 7766555433 346667776654
Q ss_pred c----EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCc
Q psy5751 123 R----EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNR 196 (232)
Q Consensus 123 ~----~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~ 196 (232)
. .+++.. ....|-+.+| .++.++.++...|...+++...- +...-.+-.|+|. +.|++.++-+..+.
T Consensus 309 ~it~rrVLvGH--rAaVNvVdfd---~kyIVsASgDRTikvW~~st~ef--vRtl~gHkRGIAClQYr~rlvVSGSSDnt 381 (499)
T KOG0281|consen 309 DITLRRVLVGH--RAAVNVVDFD---DKYIVSASGDRTIKVWSTSTCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNT 381 (499)
T ss_pred HHHHHHHHhhh--hhheeeeccc---cceEEEecCCceEEEEeccceee--ehhhhcccccceehhccCeEEEecCCCce
Confidence 2 222222 4556666555 44667777777787777775432 1223345567775 68999999888888
Q ss_pred EEEEeCC
Q psy5751 197 IESANKE 203 (232)
Q Consensus 197 i~~~~~~ 203 (232)
|...+..
T Consensus 382 IRlwdi~ 388 (499)
T KOG0281|consen 382 IRLWDIE 388 (499)
T ss_pred EEEEecc
Confidence 8877754
No 142
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=94.88 E-value=2 Score=36.14 Aligned_cols=205 Identities=13% Similarity=0.135 Sum_probs=120.3
Q ss_pred EEEEeCCCCEEEEE-EcCCC--CcEEEEEcCCCceeEEEeCCCC--CccEEEEeecCCeEEEEeCCC----------CeE
Q psy5751 4 GITVDCVEGQVYYS-SVADK--SSIKRAHLDGKNVEDVITTNIR--SPEGLTFDWVNRVLYWTDSQM----------DTI 68 (232)
Q Consensus 4 ~i~~d~~~~~ly~~-d~~~~--~~i~~~~~~g~~~~~~~~~~~~--~p~gl~~d~~~~~ly~~d~~~----------~~I 68 (232)
++.+.+..+.|-++ |.++. ..|+.+++..+.. +...+. ...+++....+..+|++.... ..|
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~---l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKF---LPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEE---EEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcC---cCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 56777777777665 54433 3588888876532 222222 223366665556777776332 347
Q ss_pred EEEeCCCCCCE--EEEeCCCC-C-ceEEEEeCCCCeEEEEEcCCCC-CcEEEEeCCCC-----CcEEEEEcCCCCCcceE
Q psy5751 69 SMANLNDDQPK--VIVSKDLV-N-PRGIVVHPYYRKLFWSDWNRSG-PKIEWSNLDGT-----DREIFLKAADLKLPNSL 138 (232)
Q Consensus 69 ~~~~~~g~~~~--~~~~~~~~-~-p~~iavd~~~~~ly~~d~~~~~-~~I~~~~~~g~-----~~~~~~~~~~~~~p~~l 138 (232)
++..+...... .++..... . -.++..++.++.|++....... ..++..+++.. ....+... ......
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~--~~~~~~- 281 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPR--EDGVEY- 281 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEES--SSS-EE-
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCC--CCceEE-
Confidence 88888776543 55553221 1 3477888888888887665444 67899998874 33444332 222221
Q ss_pred EEeCCCCEEEEE-ECC--CCcEEEEecCCCc----eEEEecCC--CceEEEEEECCEEEEEeCCC--CcEEEEeCC-CCC
Q psy5751 139 AVDFRTDELCWV-DAD--SKSLECMTIRNRV----RRKVYSNC--TYPFGLSITDEKYYWTDWKT--NRIESANKE-GER 206 (232)
Q Consensus 139 ~~d~~~~~Ly~~-d~~--~~~i~~~~~~g~~----~~~~~~~~--~~p~gla~~~~~ly~td~~~--~~i~~~~~~-g~~ 206 (232)
.++..++.+|+. +.. .++|.+++++... ...+.... ....++.+++++|++....+ .+|..++.. +..
T Consensus 282 ~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 282 YVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKE 361 (414)
T ss_dssp EEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEE
T ss_pred EEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcE
Confidence 223335777764 432 5689999998654 22444432 35678888999999885544 578888888 666
Q ss_pred cceEEecc
Q psy5751 207 APSIALDM 214 (232)
Q Consensus 207 ~~~i~~~~ 214 (232)
...+..+.
T Consensus 362 ~~~~~~p~ 369 (414)
T PF02897_consen 362 SREIPLPE 369 (414)
T ss_dssp EEEEESSS
T ss_pred EeeecCCc
Confidence 66665544
No 143
>KOG1539|consensus
Probab=94.88 E-value=2.9 Score=37.89 Aligned_cols=155 Identities=12% Similarity=0.044 Sum_probs=88.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE---eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI---TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~---~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
+.+++.+...+..|..-.. + .|-+++++.+-...-. ...-....|+++|..++ +-++-...|.+...+......
T Consensus 451 ~~av~vs~CGNF~~IG~S~-G-~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~-~~vsa~~~Gilkfw~f~~k~l 527 (910)
T KOG1539|consen 451 ATAVCVSFCGNFVFIGYSK-G-TIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNR-LLVSAGADGILKFWDFKKKVL 527 (910)
T ss_pred eEEEEEeccCceEEEeccC-C-eEEEEEcccCeeecccccCccccCceeEEEecCCCc-eEEEccCcceEEEEecCCcce
Confidence 4567777777777764433 3 6899999854322222 11225789999998554 555666667888888877653
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
..-+. -...+..+..+.. ..++....+ .-+|..++.....+.-.+.. .-..-++++|++++++|..+ ...+.|.
T Consensus 528 ~~~l~-l~~~~~~iv~hr~-s~l~a~~~d--df~I~vvD~~t~kvvR~f~g-h~nritd~~FS~DgrWlisa-smD~tIr 601 (910)
T KOG1539|consen 528 KKSLR-LGSSITGIVYHRV-SDLLAIALD--DFSIRVVDVVTRKVVREFWG-HGNRITDMTFSPDGRWLISA-SMDSTIR 601 (910)
T ss_pred eeeec-cCCCcceeeeeeh-hhhhhhhcC--ceeEEEEEchhhhhhHHhhc-cccceeeeEeCCCCcEEEEe-ecCCcEE
Confidence 22222 1123344544432 223332222 23455555543322211211 14567899999998888766 4456677
Q ss_pred EEecCCC
Q psy5751 159 CMTIRNR 165 (232)
Q Consensus 159 ~~~~~g~ 165 (232)
..|+..+
T Consensus 602 ~wDlpt~ 608 (910)
T KOG1539|consen 602 TWDLPTG 608 (910)
T ss_pred EEeccCc
Confidence 7777644
No 144
>PTZ00420 coronin; Provisional
Probab=94.83 E-value=2.6 Score=37.20 Aligned_cols=219 Identities=6% Similarity=0.005 Sum_probs=116.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--ee------EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VE------DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN 74 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~------~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~ 74 (232)
.+++|++..+.++++-..++ .|...++.... .. ..+......+..+++.+.+..++.+-...+.|...|+.
T Consensus 78 ~~lafsP~~~~lLASgS~Dg-tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~ 156 (568)
T PTZ00420 78 LDLQFNPCFSEILASGSEDL-TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIE 156 (568)
T ss_pred EEEEEcCCCCCEEEEEeCCC-eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECC
Confidence 47888886455555555555 78877876321 11 12222335678889998777777666667889999987
Q ss_pred CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEE-----EeCCCCEEEE
Q psy5751 75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLA-----VDFRTDELCW 149 (232)
Q Consensus 75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~-----~d~~~~~Ly~ 149 (232)
.......+. ......+++.++ .|.++.+... ..+|...++........+... ........ +.++++.|..
T Consensus 157 tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~--D~~IrIwD~Rsg~~i~tl~gH-~g~~~s~~v~~~~fs~d~~~IlT 231 (568)
T PTZ00420 157 NEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCV--GKHMHIIDPRKQEIASSFHIH-DGGKNTKNIWIDGLGGDDNYILS 231 (568)
T ss_pred CCcEEEEEe-cCCcEEEEEECC-CCCEEEEEec--CCEEEEEECCCCcEEEEEecc-cCCceeEEEEeeeEcCCCCEEEE
Confidence 655433332 234577899998 5555555432 356778887755432222211 11111122 2244455544
Q ss_pred EECC---CCcEEEEecCCC-ceEEEecCCCceEEEE--EE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCccee-
Q psy5751 150 VDAD---SKSLECMTIRNR-VRRKVYSNCTYPFGLS--IT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYM- 220 (232)
Q Consensus 150 ~d~~---~~~i~~~~~~g~-~~~~~~~~~~~p~gla--~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p- 220 (232)
+-.. ...|...+++.. ........-..+..|. ++ .+.+|++-.+.+.|+.+....+....+ ..+....|
T Consensus 232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l--~~~~s~~p~ 309 (568)
T PTZ00420 232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKV--NEYKSCSPF 309 (568)
T ss_pred EEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEee--cccccCCCc
Confidence 3222 135777776632 2211112111222222 22 477888877788888888764332222 22333333
Q ss_pred EEEEEEcCC
Q psy5751 221 YGIAAVPSS 229 (232)
Q Consensus 221 ~gi~~~~~~ 229 (232)
.|+++.+..
T Consensus 310 ~g~~f~Pkr 318 (568)
T PTZ00420 310 RSFGFLPKQ 318 (568)
T ss_pred cceEEcccc
Confidence 456666654
No 145
>KOG0268|consensus
Probab=94.77 E-value=0.78 Score=37.41 Aligned_cols=133 Identities=13% Similarity=0.163 Sum_probs=90.7
Q ss_pred ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
...+.+.+..-.|.-+....+.|..+|+....+ ++++. -++++|+-.| +...|++... ...++..+|..-..
T Consensus 190 i~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~---mRTN~IswnP-eafnF~~a~E--D~nlY~~DmR~l~~ 263 (433)
T KOG0268|consen 190 ISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT---MRTNTICWNP-EAFNFVAANE--DHNLYTYDMRNLSR 263 (433)
T ss_pred eeEEecCCCcchheeeeccCCceEEEecccCCccceeeee---ccccceecCc-cccceeeccc--cccceehhhhhhcc
Confidence 355556666666666665667888888765543 33332 3788999999 8888877643 55688888765544
Q ss_pred EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEe--cCCCceEEEEEECC
Q psy5751 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY--SNCTYPFGLSITDE 185 (232)
Q Consensus 124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~--~~~~~p~gla~~~~ 185 (232)
.+-+..+......++.++|. |.=|++-+....|..+..+.+..+.++ ...++..++.+-.+
T Consensus 264 p~~v~~dhvsAV~dVdfspt-G~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~D 326 (433)
T KOG0268|consen 264 PLNVHKDHVSAVMDVDFSPT-GQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMD 326 (433)
T ss_pred cchhhcccceeEEEeccCCC-cchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEecc
Confidence 44443333556667788887 677788888888988888876665553 38888999988533
No 146
>PTZ00420 coronin; Provisional
Probab=94.74 E-value=2.8 Score=37.06 Aligned_cols=193 Identities=10% Similarity=0.008 Sum_probs=105.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++....++.+-..++ .|...++........+.. ...+.++++++.+. ++.+....+.|...|+........+
T Consensus 129 ~sVaf~P~g~~iLaSgS~Dg-tIrIWDl~tg~~~~~i~~-~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 129 SIIDWNPMNYYIMCSSGFDS-FVNIWDIENEKRAFQINM-PKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred EEEEECCCCCeEEEEEeCCC-eEEEEECCCCcEEEEEec-CCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcEEEEE
Confidence 46788886666666655556 788888875543222222 24678888888555 5555556678999998765543333
Q ss_pred eCCCCCceEEEE-----eCCCCeEEEEEcCC-CCCcEEEEeCCCCC--cEEEEEcCCCCCcceE--EEeCCCCEEEEEEC
Q psy5751 83 SKDLVNPRGIVV-----HPYYRKLFWSDWNR-SGPKIEWSNLDGTD--REIFLKAADLKLPNSL--AVDFRTDELCWVDA 152 (232)
Q Consensus 83 ~~~~~~p~~iav-----d~~~~~ly~~d~~~-~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l--~~d~~~~~Ly~~d~ 152 (232)
..+.......++ .+..+.|..+.... ...+|...++.... ...+... ..+..| ..|++.+.+|++=.
T Consensus 206 ~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld---~~~~~L~p~~D~~tg~l~lsGk 282 (568)
T PTZ00420 206 HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSID---NASAPLIPHYDESTGLIYLIGK 282 (568)
T ss_pred ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEec---CCccceEEeeeCCCCCEEEEEE
Confidence 322211111222 24345555544332 12357777766422 2222111 122332 55777789999888
Q ss_pred CCCcEEEEecCCCceEEEec-CCCce-EEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 153 DSKSLECMTIRNRVRRKVYS-NCTYP-FGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 153 ~~~~i~~~~~~g~~~~~~~~-~~~~p-~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
+.+.|...++.......+.+ ....| .|+++.-.+. +|.....|.|+-+.
T Consensus 283 GD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr~--~dv~~cEi~R~~kl 333 (568)
T PTZ00420 283 GDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQI--CDVYKCEIGRVYKN 333 (568)
T ss_pred CCCeEEEEEccCCcEEeecccccCCCccceEEccccc--cCchhhhHhHHhhh
Confidence 88888888887554444433 22233 3666643331 34444555555443
No 147
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=94.58 E-value=2.2 Score=35.20 Aligned_cols=142 Identities=8% Similarity=0.055 Sum_probs=78.6
Q ss_pred EEEEeCCCCEEEEE--EcCCC-CcEEEEEcCCCceeEEEeC----CCCCccEEEEe-ecCC-eEEEEeCC-CCeEEEEeC
Q psy5751 4 GITVDCVEGQVYYS--SVADK-SSIKRAHLDGKNVEDVITT----NIRSPEGLTFD-WVNR-VLYWTDSQ-MDTISMANL 73 (232)
Q Consensus 4 ~i~~d~~~~~ly~~--d~~~~-~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d-~~~~-~ly~~d~~-~~~I~~~~~ 73 (232)
.+.|...++.|++. +-..+ ..+..++......+.+... -+.....+.+- ..++ .|++++.. -.+|+.++.
T Consensus 188 ~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~ 267 (353)
T PF00930_consen 188 RVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDL 267 (353)
T ss_dssp EEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEET
T ss_pred cceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcc
Confidence 45565544434433 33333 2466666654433333321 12223344432 2344 44445532 257999999
Q ss_pred CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcC--CCCCcEEEEeCC-CCCcEEEEEcCCCCCc-ceEEEeCCCCEEE
Q psy5751 74 NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWN--RSGPKIEWSNLD-GTDREIFLKAADLKLP-NSLAVDFRTDELC 148 (232)
Q Consensus 74 ~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~--~~~~~I~~~~~~-g~~~~~~~~~~~~~~p-~~l~~d~~~~~Ly 148 (232)
+|...+.+......--.-+.+|+.++.||++... ....++++++++ +...+.+... ... ..++++++++.+.
T Consensus 268 ~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~---~~~~~~~~~Spdg~y~v 343 (353)
T PF00930_consen 268 DGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCE---DGDHYSASFSPDGKYYV 343 (353)
T ss_dssp TSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTT---SSTTEEEEE-TTSSEEE
T ss_pred cccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCC---CCCceEEEECCCCCEEE
Confidence 9987665544333222347799989999999865 236689999999 6665554333 233 4889999755543
No 148
>PRK13616 lipoprotein LpqB; Provisional
Probab=94.48 E-value=3.3 Score=36.82 Aligned_cols=178 Identities=12% Similarity=0.020 Sum_probs=98.7
Q ss_pred EEEEeCCCCEEEEEEc------CCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC-----------CC
Q psy5751 4 GITVDCVEGQVYYSSV------ADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ-----------MD 66 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~------~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~-----------~~ 66 (232)
+.++.+..+.+.++.. ...+.|+.++..+.. ..+... ..-..-.+++.++.|++.... .+
T Consensus 354 spaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g 430 (591)
T PRK13616 354 SAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATG 430 (591)
T ss_pred cceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecC--CCCCCceECCCCCceEEEecCcceEEEeccCCCc
Confidence 4566676666655541 111378888875544 333322 123344556655666655322 34
Q ss_pred eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEE---EeCCCCCcEE-----EEEcCCCCC-cce
Q psy5751 67 TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW---SNLDGTDREI-----FLKAADLKL-PNS 137 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~---~~~~g~~~~~-----~~~~~~~~~-p~~ 137 (232)
.|++..+++..... . --..+..+.+.|...+|.+.-. ++|+. ...++...++ +... +.. +..
T Consensus 431 ql~~~~vd~ge~~~--~-~~g~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~--l~~~~~~ 501 (591)
T PRK13616 431 QLARTPVDASAVAS--R-VPGPISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPG--LGDTAVS 501 (591)
T ss_pred eEEEEeccCchhhh--c-cCCCcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecc--cCCcccc
Confidence 55555555543322 1 1235778889988888887662 35766 4434443222 2221 333 466
Q ss_pred EEEeCCCCEEEEEECC-CCcEEEEecCCCceEEEec-CCCce-EEEEEECCEEEEEeCCC
Q psy5751 138 LAVDFRTDELCWVDAD-SKSLECMTIRNRVRRKVYS-NCTYP-FGLSITDEKYYWTDWKT 194 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~~-~~~i~~~~~~g~~~~~~~~-~~~~p-~gla~~~~~ly~td~~~ 194 (232)
+..-.+ +.|++.... ...++++.+||...+.+.. ++..| ..|+...+.+|+++...
T Consensus 502 l~W~~~-~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~g 560 (591)
T PRK13616 502 LDWRTG-DSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPSTVYVTDARA 560 (591)
T ss_pred ceEecC-CEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCceEEEEcCCc
Confidence 666665 557666443 4579999999987665322 33333 35555567899998653
No 149
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []. Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding
Probab=94.45 E-value=1.9 Score=33.83 Aligned_cols=139 Identities=15% Similarity=0.110 Sum_probs=80.5
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCcee-EEEeCC------------CCCccEEEEeecCCeEEEE---eCCCCeEEEEeC-
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVE-DVITTN------------IRSPEGLTFDWVNRVLYWT---DSQMDTISMANL- 73 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~-~~~~~~------------~~~p~gl~~d~~~~~ly~~---d~~~~~I~~~~~- 73 (232)
++.||+--.... .|.|+++...... ....++ -..--.+|+|+ ++ |++. ....+.|.+..+
T Consensus 78 ngslYY~~~~s~-~IvkydL~t~~v~~~~~L~~A~~~n~~~y~~~~~t~iD~AvDE-~G-LWvIYat~~~~g~ivvskld 154 (250)
T PF02191_consen 78 NGSLYYNKYNSR-NIVKYDLTTRSVVARRELPGAGYNNRFPYYWSGYTDIDFAVDE-NG-LWVIYATEDNNGNIVVSKLD 154 (250)
T ss_pred CCcEEEEecCCc-eEEEEECcCCcEEEEEECCccccccccceecCCCceEEEEEcC-CC-EEEEEecCCCCCcEEEEeeC
Confidence 578888877777 9999999976654 222221 11225688886 33 4443 444445665544
Q ss_pred -CCCCCEEEEeCCCCCce-EEEEeCCCCeEEEEEcCCCC-CcEE-EEeCCCCCcE---EEEEcCCCCCcceEEEeCCCCE
Q psy5751 74 -NDDQPKVIVSKDLVNPR-GIVVHPYYRKLFWSDWNRSG-PKIE-WSNLDGTDRE---IFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 74 -~g~~~~~~~~~~~~~p~-~iavd~~~~~ly~~d~~~~~-~~I~-~~~~~g~~~~---~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
+....+.........+. +-|+- ..|.||.++..... .+|. ..++...... +.+... .....-|.-+|.+++
T Consensus 155 ~~tL~v~~tw~T~~~k~~~~naFm-vCGvLY~~~s~~~~~~~I~yafDt~t~~~~~~~i~f~~~-~~~~~~l~YNP~dk~ 232 (250)
T PF02191_consen 155 PETLSVEQTWNTSYPKRSAGNAFM-VCGVLYATDSYDTRDTEIFYAFDTYTGKEEDVSIPFPNP-YGNISMLSYNPRDKK 232 (250)
T ss_pred cccCceEEEEEeccCchhhcceee-EeeEEEEEEECCCCCcEEEEEEECCCCceeceeeeeccc-cCceEeeeECCCCCe
Confidence 44455555554444442 22222 26999999875332 4443 5665533222 222222 455678888999999
Q ss_pred EEEEECCC
Q psy5751 147 LCWVDADS 154 (232)
Q Consensus 147 Ly~~d~~~ 154 (232)
||.=|.+.
T Consensus 233 LY~wd~G~ 240 (250)
T PF02191_consen 233 LYAWDNGY 240 (250)
T ss_pred EEEEECCe
Confidence 99888544
No 150
>KOG0293|consensus
Probab=94.21 E-value=2.8 Score=34.93 Aligned_cols=151 Identities=11% Similarity=0.014 Sum_probs=94.5
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+.|.|.+..|. +--.++ .+...+.+.+........+ -..+.+.+--+.+.. +++....+.|..+++||.....=-
T Consensus 274 yi~wSPDdryLl-aCg~~e-~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~-~V~Gs~dr~i~~wdlDgn~~~~W~ 350 (519)
T KOG0293|consen 274 YIMWSPDDRYLL-ACGFDE-VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFR-FVTGSPDRTIIMWDLDGNILGNWE 350 (519)
T ss_pred EEEECCCCCeEE-ecCchH-heeeccCCcchhhhhcccCcCCCcceeEEccCCce-eEecCCCCcEEEecCCcchhhccc
Confidence 566777444443 333334 4666666654433333332 246677777775544 667777789999999997632221
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
........++|+.+.+..++..... .+|..++.+......+.+. -+....++++.+ +++..++.....|...++
T Consensus 351 gvr~~~v~dlait~Dgk~vl~v~~d---~~i~l~~~e~~~dr~lise--~~~its~~iS~d-~k~~LvnL~~qei~LWDl 424 (519)
T KOG0293|consen 351 GVRDPKVHDLAITYDGKYVLLVTVD---KKIRLYNREARVDRGLISE--EQPITSFSISKD-GKLALVNLQDQEIHLWDL 424 (519)
T ss_pred ccccceeEEEEEcCCCcEEEEEecc---cceeeechhhhhhhccccc--cCceeEEEEcCC-CcEEEEEcccCeeEEeec
Confidence 1223456799999888888887754 3577666665544434433 345578889887 777778777777777777
Q ss_pred C
Q psy5751 163 R 163 (232)
Q Consensus 163 ~ 163 (232)
.
T Consensus 425 ~ 425 (519)
T KOG0293|consen 425 E 425 (519)
T ss_pred c
Confidence 5
No 151
>KOG0289|consensus
Probab=94.21 E-value=2.9 Score=35.04 Aligned_cols=163 Identities=12% Similarity=0.074 Sum_probs=93.6
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
....++...+.+.-+.|++... .+-..++.....-..+. .+.-.-...+++| +|.||.+... .+.+...++...
T Consensus 304 ~~V~~ls~h~tgeYllsAs~d~-~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~--d~~vkiwdlks~ 379 (506)
T KOG0289|consen 304 EPVTGLSLHPTGEYLLSASNDG-TWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTP--DGVVKIWDLKSQ 379 (506)
T ss_pred ccceeeeeccCCcEEEEecCCc-eEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCC--CceEEEEEcCCc
Confidence 3557888888777777777654 34444444433333332 2333456788998 8999988754 456777777655
Q ss_pred CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc-eEEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEE
Q psy5751 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV-RRKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIE 198 (232)
Q Consensus 122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~-~~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~ 198 (232)
....-+.. +-.....|+|... |+-..+....+.|...|++..+ .+++ .........+.+| .|.....-...=.|+
T Consensus 380 ~~~a~Fpg-ht~~vk~i~FsEN-GY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy 457 (506)
T KOG0289|consen 380 TNVAKFPG-HTGPVKAISFSEN-GYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVY 457 (506)
T ss_pred cccccCCC-CCCceeEEEeccC-ceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEE
Confidence 42211111 1233457788763 5544555566779999988542 3333 2333345566776 444333334445667
Q ss_pred EEeCCCCCcceEEe
Q psy5751 199 SANKEGERAPSIAL 212 (232)
Q Consensus 199 ~~~~~g~~~~~i~~ 212 (232)
.+.+...+++.+..
T Consensus 458 ~~~k~~k~W~~~~~ 471 (506)
T KOG0289|consen 458 ICKKKTKSWTEIKE 471 (506)
T ss_pred EEecccccceeeeh
Confidence 77766666665544
No 152
>KOG0263|consensus
Probab=94.09 E-value=4.1 Score=36.39 Aligned_cols=150 Identities=11% Similarity=0.070 Sum_probs=94.3
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEE-EEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKR-AHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~-~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+.|.+ . ..|++...+. +..+ ...+-.....++...+.....+.++|. .+.-.+.+....+...|.......-++.
T Consensus 499 V~F~P-~-GyYFatas~D-~tArLWs~d~~~PlRifaghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~ 574 (707)
T KOG0263|consen 499 VQFAP-R-GYYFATASHD-QTARLWSTDHNKPLRIFAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFT 574 (707)
T ss_pred EEecC-C-ceEEEecCCC-ceeeeeecccCCchhhhcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEec
Confidence 44554 3 4455554544 3332 333334444566667788889999994 4333455566778888877777766777
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
.+-.....++++| .|+-..+.. ..+.|...++.+......+... -..-..|+|+.+ +.+.++....+.|...|+.
T Consensus 575 GH~~~V~al~~Sp-~Gr~LaSg~--ed~~I~iWDl~~~~~v~~l~~H-t~ti~SlsFS~d-g~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 575 GHKGPVTALAFSP-CGRYLASGD--EDGLIKIWDLANGSLVKQLKGH-TGTIYSLSFSRD-GNVLASGGADNSVRLWDLT 649 (707)
T ss_pred CCCCceEEEEEcC-CCceEeecc--cCCcEEEEEcCCCcchhhhhcc-cCceeEEEEecC-CCEEEecCCCCeEEEEEch
Confidence 6766778999998 443333322 3567888888775433332222 445678999988 5666777777777776665
No 153
>KOG0268|consensus
Probab=93.91 E-value=3 Score=34.16 Aligned_cols=205 Identities=12% Similarity=0.109 Sum_probs=106.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.||.++. +..+++.|.. .|.....+|....+++.. ....||.-.+ .+.+|.|... .|...|..-..+..-+
T Consensus 113 ~Gi~v~~-~~~~tvgdDK---tvK~wk~~~~p~~tilg~--s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R~~Pv~sm 183 (433)
T KOG0268|consen 113 RGICVTQ-TSFFTVGDDK---TVKQWKIDGPPLHTILGK--SVYLGIDHHR-KNSVFATCGE--QIDIWDEQRDNPVSSM 183 (433)
T ss_pred eeEEecc-cceEEecCCc---ceeeeeccCCcceeeecc--cccccccccc-ccccccccCc--eeeecccccCCcccee
Confidence 3666665 5555555544 455555555433334332 3445555555 4456655433 3444444333333333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+-.......+-..|..-.|..+-. ....|..+++.-.. ..+++.. .+|+|+..| +...|++-.....++..
T Consensus 184 swG~Dti~svkfNpvETsILas~~--sDrsIvLyD~R~~~Pl~KVi~~m----RTN~IswnP-eafnF~~a~ED~nlY~~ 256 (433)
T KOG0268|consen 184 SWGADSISSVKFNPVETSILASCA--SDRSIVLYDLRQASPLKKVILTM----RTNTICWNP-EAFNFVAANEDHNLYTY 256 (433)
T ss_pred ecCCCceeEEecCCCcchheeeec--cCCceEEEecccCCccceeeeec----cccceecCc-cccceeeccccccceeh
Confidence 223333344445544333333221 12335555553322 2333333 689999999 78999998888899999
Q ss_pred ecCCCceEEEe--cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEE
Q psy5751 161 TIRNRVRRKVY--SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIA 224 (232)
Q Consensus 161 ~~~g~~~~~~~--~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~ 224 (232)
|+.-..+..-+ ........+++- -|.=+++-+....|..+....+.-+.+++ ....+..++|.
T Consensus 257 DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh-tkRMq~V~~Vk 322 (433)
T KOG0268|consen 257 DMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH-TKRMQHVFCVK 322 (433)
T ss_pred hhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhh-HhhhheeeEEE
Confidence 88865443221 123333444542 45667777777777777776444343433 22244445544
No 154
>smart00284 OLF Olfactomedin-like domains.
Probab=93.78 E-value=2.6 Score=33.04 Aligned_cols=140 Identities=14% Similarity=0.108 Sum_probs=78.1
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCC-----------CCCccEEEEeecCC-eEEEEeCCCCeEEEEeCC--
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVE--DVITTN-----------IRSPEGLTFDWVNR-VLYWTDSQMDTISMANLN-- 74 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~-----------~~~p~gl~~d~~~~-~ly~~d~~~~~I~~~~~~-- 74 (232)
++.||+.-.... .|.|+++...... ..+... -..--.+|+|+.+= .||-+....+.|.+..++
T Consensus 83 ngslYY~~~~s~-~iiKydL~t~~v~~~~~Lp~a~y~~~~~Y~~~~~sdiDlAvDE~GLWvIYat~~~~g~ivvSkLnp~ 161 (255)
T smart00284 83 NGSLYFNKFNSH-DICRFDLTTETYQKEPLLNGAGYNNRFPYAWGGFSDIDLAVDENGLWVIYATEQNAGKIVISKLNPA 161 (255)
T ss_pred CceEEEEecCCc-cEEEEECCCCcEEEEEecCccccccccccccCCCccEEEEEcCCceEEEEeccCCCCCEEEEeeCcc
Confidence 578998776766 8999999976542 222210 11225688886221 233334555667755544
Q ss_pred CCCCEEEEeCCCCCce-EEEEeCCCCeEEEEEcC-CCCCcEE-EEeCCCCCcEEE---EEcCCCCCcceEEEeCCCCEEE
Q psy5751 75 DDQPKVIVSKDLVNPR-GIVVHPYYRKLFWSDWN-RSGPKIE-WSNLDGTDREIF---LKAADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 75 g~~~~~~~~~~~~~p~-~iavd~~~~~ly~~d~~-~~~~~I~-~~~~~g~~~~~~---~~~~~~~~p~~l~~d~~~~~Ly 148 (232)
...++.........+. +-|+- ..|.||.++.. ....+|. ..+..+.....+ +... ......|.-.|.++.||
T Consensus 162 tL~ve~tW~T~~~k~sa~naFm-vCGvLY~~~s~~~~~~~I~yayDt~t~~~~~~~i~f~n~-y~~~s~l~YNP~d~~LY 239 (255)
T smart00284 162 TLTIENTWITTYNKRSASNAFM-ICGILYVTRSLGSKGEKVFYAYDTNTGKEGHLDIPFENM-YEYISMLDYNPNDRKLY 239 (255)
T ss_pred cceEEEEEEcCCCcccccccEE-EeeEEEEEccCCCCCcEEEEEEECCCCccceeeeeeccc-cccceeceeCCCCCeEE
Confidence 4445555554443332 22222 25999999862 2344564 566654432211 1111 33345588888889999
Q ss_pred EEECC
Q psy5751 149 WVDAD 153 (232)
Q Consensus 149 ~~d~~ 153 (232)
.=|.+
T Consensus 240 ~wdng 244 (255)
T smart00284 240 AWNNG 244 (255)
T ss_pred EEeCC
Confidence 87743
No 155
>KOG0292|consensus
Probab=93.75 E-value=5.6 Score=36.68 Aligned_cols=161 Identities=14% Similarity=0.119 Sum_probs=94.3
Q ss_pred EEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 6 TVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+|++ +--|+++-..+. -+++|+.-.. ..+.-. ....+...++-+++ .+.|..+....+.|.+.|++.......+.
T Consensus 213 Afhp-TlpliVSG~DDRqVKlWrmnetK-aWEvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~kRt~v~tfr 289 (1202)
T KOG0292|consen 213 AFHP-TLPLIVSGADDRQVKLWRMNETK-AWEVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTKRTSVQTFR 289 (1202)
T ss_pred EecC-CcceEEecCCcceeeEEEecccc-ceeehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecccccceeeee
Confidence 4444 445666544444 1344444332 222212 23467889999998 67788899999999999999877666665
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
....+-+-+|.+| ...||-+.-..+ +++..++. .+-..+++- +.||+.. ...|...++.
T Consensus 290 rendRFW~laahP-~lNLfAAgHDsG---m~VFkleR-------------Erpa~~v~~--n~LfYvk--d~~i~~~d~~ 348 (1202)
T KOG0292|consen 290 RENDRFWILAAHP-ELNLFAAGHDSG---MIVFKLER-------------ERPAYAVNG--NGLFYVK--DRFIRSYDLR 348 (1202)
T ss_pred ccCCeEEEEEecC-CcceeeeecCCc---eEEEEEcc-------------cCceEEEcC--CEEEEEc--cceEEeeecc
Confidence 4556778888888 777877754321 33333321 233344443 4566665 5567777777
Q ss_pred CCceEEEec--CC----CceEEEEE--ECCEEEEE
Q psy5751 164 NRVRRKVYS--NC----TYPFGLSI--TDEKYYWT 190 (232)
Q Consensus 164 g~~~~~~~~--~~----~~p~gla~--~~~~ly~t 190 (232)
..+-..+.+ .. ..|.++.+ .++.+.++
T Consensus 349 t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlic 383 (1202)
T KOG0292|consen 349 TQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLIC 383 (1202)
T ss_pred ccccceeEeccCCCcccCCcceeeeccccCeEEEE
Confidence 644333322 22 23456666 35655555
No 156
>KOG2055|consensus
Probab=93.64 E-value=3.9 Score=34.55 Aligned_cols=189 Identities=9% Similarity=0.059 Sum_probs=103.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE---EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV---ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~---~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.++.|++....|.++..+. .+..+.++|..-..+ .... ..+...++.+.+....++.....-.+.+|+......
T Consensus 217 ~sv~FHp~~plllvaG~d~--~lrifqvDGk~N~~lqS~~l~~-fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~ 293 (514)
T KOG2055|consen 217 TSVQFHPTAPLLLVAGLDG--TLRIFQVDGKVNPKLQSIHLEK-FPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVT 293 (514)
T ss_pred eEEEecCCCceEEEecCCC--cEEEEEecCccChhheeeeecc-CccceeeecCCCceEEEecccceEEEEeeccccccc
Confidence 4789999777777777654 466777777543222 2222 244556676666634445555567788888665433
Q ss_pred EEEe-CCCC--CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 80 VIVS-KDLV--NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 80 ~~~~-~~~~--~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
.+.. .... ....+.|.+... |.+-.+ ..+.|.....-... +..+-. -....+++++.++.+||.+ .+.+
T Consensus 294 k~~~~~g~e~~~~e~FeVShd~~--fia~~G-~~G~I~lLhakT~eli~s~Ki---eG~v~~~~fsSdsk~l~~~-~~~G 366 (514)
T KOG2055|consen 294 KLKPPYGVEEKSMERFEVSHDSN--FIAIAG-NNGHIHLLHAKTKELITSFKI---EGVVSDFTFSSDSKELLAS-GGTG 366 (514)
T ss_pred cccCCCCcccchhheeEecCCCC--eEEEcc-cCceEEeehhhhhhhhheeee---ccEEeeEEEecCCcEEEEE-cCCc
Confidence 3322 1111 224566777555 333333 25667665543332 222222 2356789999886666544 6678
Q ss_pred cEEEEecCCCce-EEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751 156 SLECMTIRNRVR-RKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 156 ~i~~~~~~g~~~-~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~ 201 (232)
.|+..+++-... +.+ .++.-+-..++.. ++.++=+-+.++-|-..+
T Consensus 367 eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 367 EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred eEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence 999999986533 222 2333344444542 444344445556555554
No 157
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.45 E-value=2.6 Score=31.97 Aligned_cols=114 Identities=18% Similarity=0.114 Sum_probs=66.6
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--EEEEeCCCCCceEE--EEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--KVIVSKDLVNPRGI--VVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~i--avd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
..-+|++.|. .+|.-+| ++..++..|+..... .+.+. ....|.+. .+-...|.||-.-|. ..+|.|++.+
T Consensus 131 GeGWgLt~d~--~~Limsd-GsatL~frdP~tfa~~~~v~VT-~~g~pv~~LNELE~VdG~lyANVw~--t~~I~rI~p~ 204 (262)
T COG3823 131 GEGWGLTSDD--KNLIMSD-GSATLQFRDPKTFAELDTVQVT-DDGVPVSKLNELEWVDGELYANVWQ--TTRIARIDPD 204 (262)
T ss_pred CcceeeecCC--cceEeeC-CceEEEecCHHHhhhcceEEEE-ECCeecccccceeeeccEEEEeeee--ecceEEEcCC
Confidence 3567888884 4565444 445666666655331 11111 11222211 133347888877775 3468888888
Q ss_pred CCCcEEEEEcC-----------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 120 GTDREIFLKAA-----------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 120 g~~~~~~~~~~-----------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
...+.....-. ...-+||||.++..+++|.+--.-..+..+.++
T Consensus 205 sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK~wp~lfEVk~~ 259 (262)
T COG3823 205 SGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGKLWPLLFEVKLD 259 (262)
T ss_pred CCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecCcCceeEEEEec
Confidence 76554433211 134689999999999999985555555555544
No 158
>KOG1274|consensus
Probab=93.44 E-value=6.2 Score=36.22 Aligned_cols=152 Identities=13% Similarity=0.101 Sum_probs=91.8
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+.|++..+.|+.++.... |.++..... ...+.+...-....+++.+. +.|.+....+.|.++..+......++
T Consensus 18 ~i~~d~~gefi~tcgsdg~--ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s---~~f~~~s~~~tv~~y~fps~~~~~iL 92 (933)
T KOG1274|consen 18 LICYDPDGEFICTCGSDGD--IRKWKTNSDEEEPETIDISGELVSSIACYS---NHFLTGSEQNTVLRYKFPSGEEDTIL 92 (933)
T ss_pred EEEEcCCCCEEEEecCCCc--eEEeecCCcccCCchhhccCceeEEEeecc---cceEEeeccceEEEeeCCCCCcccee
Confidence 6789998887777765543 665555433 21122221113445566653 36667777889999998877766555
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
..-.-..+.++++- +|.+-.+... .--|...+++....+..+... -....+|.+|+.+..|-+ -..+|.|...++
T Consensus 93 ~Rftlp~r~~~v~g-~g~~iaagsd--D~~vK~~~~~D~s~~~~lrgh-~apVl~l~~~p~~~fLAv-ss~dG~v~iw~~ 167 (933)
T KOG1274|consen 93 ARFTLPIRDLAVSG-SGKMIAAGSD--DTAVKLLNLDDSSQEKVLRGH-DAPVLQLSYDPKGNFLAV-SSCDGKVQIWDL 167 (933)
T ss_pred eeeeccceEEEEec-CCcEEEeecC--ceeEEEEeccccchheeeccc-CCceeeeeEcCCCCEEEE-EecCceEEEEEc
Confidence 42222346788885 4544444332 345777777666555555442 234468999997555544 466888888888
Q ss_pred CCC
Q psy5751 163 RNR 165 (232)
Q Consensus 163 ~g~ 165 (232)
+..
T Consensus 168 ~~~ 170 (933)
T KOG1274|consen 168 QDG 170 (933)
T ss_pred ccc
Confidence 744
No 159
>KOG0263|consensus
Probab=93.17 E-value=6.1 Score=35.39 Aligned_cols=189 Identities=13% Similarity=0.117 Sum_probs=106.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCC---eEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMD---TISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~---~I~~~~~~g~~~~ 79 (232)
.+..|.+. +++.++...+. .++-..++...--.+........+.+.+.+ .-.||+..... +++.++ -..+.
T Consensus 455 yg~sFsPd-~rfLlScSED~-svRLWsl~t~s~~V~y~GH~~PVwdV~F~P--~GyYFatas~D~tArLWs~d--~~~Pl 528 (707)
T KOG0263|consen 455 YGCSFSPD-RRFLLSCSEDS-SVRLWSLDTWSCLVIYKGHLAPVWDVQFAP--RGYYFATASHDQTARLWSTD--HNKPL 528 (707)
T ss_pred eeeeeccc-ccceeeccCCc-ceeeeecccceeEEEecCCCcceeeEEecC--CceEEEecCCCceeeeeecc--cCCch
Confidence 46677773 34334443434 555555554332233344444556677776 34777765533 344444 34454
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
-++..++++..-+.++|... |.+... ....+...+.-.....-++... -.....|++++.+..| .+-...+.|..
T Consensus 529 RifaghlsDV~cv~FHPNs~--Y~aTGS-sD~tVRlWDv~~G~~VRiF~GH-~~~V~al~~Sp~Gr~L-aSg~ed~~I~i 603 (707)
T KOG0263|consen 529 RIFAGHLSDVDCVSFHPNSN--YVATGS-SDRTVRLWDVSTGNSVRIFTGH-KGPVTALAFSPCGRYL-ASGDEDGLIKI 603 (707)
T ss_pred hhhcccccccceEEECCccc--ccccCC-CCceEEEEEcCCCcEEEEecCC-CCceEEEEEcCCCceE-eecccCCcEEE
Confidence 45555888888899998544 333322 1233444444433333344432 4556799999975554 33344678888
Q ss_pred EecCCCce-EEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEEeC
Q psy5751 160 MTIRNRVR-RKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 160 ~~~~g~~~-~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~~~ 202 (232)
.|+.++.. ..+...-....+|.+ .+|.+.++....+.|..-+.
T Consensus 604 WDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~ 648 (707)
T KOG0263|consen 604 WDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL 648 (707)
T ss_pred EEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence 88887544 333334555667777 46777777777776655543
No 160
>PRK13616 lipoprotein LpqB; Provisional
Probab=93.13 E-value=6 Score=35.24 Aligned_cols=156 Identities=6% Similarity=-0.053 Sum_probs=94.5
Q ss_pred CCccEEEEeecCCeEEEEeC-------CCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcC--------
Q psy5751 44 RSPEGLTFDWVNRVLYWTDS-------QMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWN-------- 107 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~-------~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~-------- 107 (232)
..+...++.+.++.+.++.. ...+|++.+.++.. +.+.. ..+. .-..+|..+.|++...+
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g~~~t---~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEGHSLT---RPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecCCCCC---CceECCCCCceEEEecCcceEEEec
Confidence 46677888887877776652 23578888876655 33333 2233 34566655666555311
Q ss_pred -CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE---EecCCCceEE-----EecCCCc-e
Q psy5751 108 -RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC---MTIRNRVRRK-----VYSNCTY-P 177 (232)
Q Consensus 108 -~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~---~~~~g~~~~~-----~~~~~~~-p 177 (232)
...++++...+++..... .. -..+..+.+++++.+|.+.-. ++|+. ...+++..+. +...+.. +
T Consensus 426 ~~~~gql~~~~vd~ge~~~--~~--~g~Issl~wSpDG~RiA~i~~--g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~ 499 (591)
T PRK13616 426 DPATGQLARTPVDASAVAS--RV--PGPISELQLSRDGVRAAMIIG--GKVYLAVVEQTEDGQYALTNPREVGPGLGDTA 499 (591)
T ss_pred cCCCceEEEEeccCchhhh--cc--CCCcCeEEECCCCCEEEEEEC--CEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence 123456666666554333 11 235889999999999988763 56766 4544544333 3334444 5
Q ss_pred EEEEEE-CCEEEEEeC-CCCcEEEEeCCCCCcce
Q psy5751 178 FGLSIT-DEKYYWTDW-KTNRIESANKEGERAPS 209 (232)
Q Consensus 178 ~gla~~-~~~ly~td~-~~~~i~~~~~~g~~~~~ 209 (232)
..+++. ++.|++... ....+++++.+|...+.
T Consensus 500 ~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~ 533 (591)
T PRK13616 500 VSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDA 533 (591)
T ss_pred ccceEecCCEEEEEecCCCCceEEEecCCccccc
Confidence 777874 667776633 33569999999887653
No 161
>KOG0286|consensus
Probab=93.07 E-value=3.7 Score=32.67 Aligned_cols=155 Identities=7% Similarity=-0.001 Sum_probs=98.2
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW 103 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~ 103 (232)
.....+++.......+.......-+|++.+.+.+.|++..-.......|+....++..+..+-.+.+.+.+.| +|.-|.
T Consensus 167 TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP-~G~afa 245 (343)
T KOG0286|consen 167 TCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFP-SGDAFA 245 (343)
T ss_pred eEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEcc-CCCeee
Confidence 4555566644433444444567788888887888999887777888888877777777777788999999998 888888
Q ss_pred EEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEec-CCCceEEEecCCCceEEEE
Q psy5751 104 SDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTI-RNRVRRKVYSNCTYPFGLS 181 (232)
Q Consensus 104 ~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~-~g~~~~~~~~~~~~p~gla 181 (232)
+-.. .+....+++.......+.+. ......+.++|+.. |+|.++-.....+...|. .+....++...-+....|.
T Consensus 246 tGSD--D~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S-GRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~ 322 (343)
T KOG0286|consen 246 TGSD--DATCRLYDLRADQELAVYSHDSIICGITSVAFSKS-GRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLG 322 (343)
T ss_pred ecCC--CceeEEEeecCCcEEeeeccCcccCCceeEEEccc-ccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEE
Confidence 8654 45566666654433333332 22556689999987 666666444444444433 3333333433333333333
Q ss_pred E
Q psy5751 182 I 182 (232)
Q Consensus 182 ~ 182 (232)
+
T Consensus 323 ~ 323 (343)
T KOG0286|consen 323 V 323 (343)
T ss_pred E
Confidence 3
No 162
>KOG4328|consensus
Probab=93.07 E-value=4.8 Score=33.95 Aligned_cols=194 Identities=13% Similarity=0.070 Sum_probs=99.0
Q ss_pred EEEEEeCCCC-EEEEEEcCCCCcEEEEEcCCC--ceeEE--EeCCCCCccEEEEeecCC-eEEEEeCCCCeEEEEeCCCC
Q psy5751 3 IGITVDCVEG-QVYYSSVADKSSIKRAHLDGK--NVEDV--ITTNIRSPEGLTFDWVNR-VLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 3 ~~i~~d~~~~-~ly~~d~~~~~~i~~~~~~g~--~~~~~--~~~~~~~p~gl~~d~~~~-~ly~~d~~~~~I~~~~~~g~ 76 (232)
.+++|++..+ .|..+-...+ .|...++.+. ....+ ....-....+|.+-+.+- .+| +.+..|.|...|+.+.
T Consensus 190 t~l~fHPt~~~~lva~GdK~G-~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~-ssSyDGtiR~~D~~~~ 267 (498)
T KOG4328|consen 190 TSLAFHPTENRKLVAVGDKGG-QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIY-SSSYDGTIRLQDFEGN 267 (498)
T ss_pred EEEEecccCcceEEEEccCCC-cEEEEecCCCCCccCceEEeccCCccccceEecCCChhhee-eeccCceeeeeeecch
Confidence 5788999777 5555544444 7888888632 22122 222223345555554332 333 3334456666666665
Q ss_pred CCEEEEeC--CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 77 QPKVIVSK--DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 77 ~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
..+.+.+. ....-.++-+...++.+++.+.-. .-.+.-.+.++.....+... -....++++.|-..+++-+-+..
T Consensus 268 i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~~~~lh--~kKI~sv~~NP~~p~~laT~s~D 344 (498)
T KOG4328|consen 268 ISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYENLRLH--KKKITSVALNPVCPWFLATASLD 344 (498)
T ss_pred hhHHHhhcCccceeeeeccccCCCccEEEeeccc-ceEEEEeecCCccchhhhhh--hcccceeecCCCCchheeecccC
Confidence 54444442 112223333444455555554321 22344444555544443333 23678899999877766665544
Q ss_pred C--cEEEEecCCCceEEEecCCCceE--EEEEE---CCEEEEEeCCCCcEEEEeC
Q psy5751 155 K--SLECMTIRNRVRRKVYSNCTYPF--GLSIT---DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 155 ~--~i~~~~~~g~~~~~~~~~~~~p~--gla~~---~~~ly~td~~~~~i~~~~~ 202 (232)
+ +||-++-=+.+..-+++.+.+-. .-|.+ .+. .+|....++|..++-
T Consensus 345 ~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 345 QTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQDNEIRVFDS 398 (498)
T ss_pred cceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeeccCCceEEeec
Confidence 4 44443222333322455444433 33443 566 555555677777765
No 163
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=92.98 E-value=4.8 Score=33.71 Aligned_cols=135 Identities=17% Similarity=0.146 Sum_probs=69.9
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC-CC--C
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK-DL--V 87 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~--~ 87 (232)
++.||+++.. + .++.++...... +-......+..++++ ++.||+.+. .+.++.++...... +... .. .
T Consensus 256 ~~~vy~~~~~-g-~l~ald~~tG~~--~W~~~~~~~~~~~~~--~~~vy~~~~-~g~l~ald~~tG~~--~W~~~~~~~~ 326 (394)
T PRK11138 256 GGVVYALAYN-G-NLVALDLRSGQI--VWKREYGSVNDFAVD--GGRIYLVDQ-NDRVYALDTRGGVE--LWSQSDLLHR 326 (394)
T ss_pred CCEEEEEEcC-C-eEEEEECCCCCE--EEeecCCCccCcEEE--CCEEEEEcC-CCeEEEEECCCCcE--EEcccccCCC
Confidence 4667776643 3 577777764331 222223334445555 678998774 47888888865432 2221 11 1
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
...+.++. ++.||+.+. .+.++.++.+.....--.............+. +++||+.. ..+.++.+..
T Consensus 327 ~~~sp~v~--~g~l~v~~~---~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~--~~~l~v~t-~~G~l~~~~~ 393 (394)
T PRK11138 327 LLTAPVLY--NGYLVVGDS---EGYLHWINREDGRFVAQQKVDSSGFLSEPVVA--DDKLLIQA-RDGTVYAITR 393 (394)
T ss_pred cccCCEEE--CCEEEEEeC---CCEEEEEECCCCCEEEEEEcCCCcceeCCEEE--CCEEEEEe-CCceEEEEeC
Confidence 11233444 788988874 35677777654432211111000111112222 47898884 3667776653
No 164
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=92.96 E-value=2.1 Score=37.20 Aligned_cols=106 Identities=17% Similarity=0.176 Sum_probs=65.4
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCC--------------CCcEEEEeCCCC-------CcEEEEEcC---C--------
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRS--------------GPKIEWSNLDGT-------DREIFLKAA---D-------- 131 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~--------------~~~I~~~~~~g~-------~~~~~~~~~---~-------- 131 (232)
..+.+|.++++.|..+.+|++..+.. -++|+|.-..+. .-++++... .
T Consensus 414 T~mdRpE~i~~~p~~g~Vy~~lTNn~~r~~~~aNpr~~n~~G~I~r~~p~~~d~t~~~ftWdlF~~aG~~~~~~~~~~~~ 493 (616)
T COG3211 414 TPMDRPEWIAVNPGTGEVYFTLTNNGKRSDDAANPRAKNGYGQIVRWIPATGDHTDTKFTWDLFVEAGNPSVLEGGASAN 493 (616)
T ss_pred ccccCccceeecCCcceEEEEeCCCCccccccCCCcccccccceEEEecCCCCccCccceeeeeeecCCccccccccccC
Confidence 36889999999999999999865422 257777665443 112222211 1
Q ss_pred -----CCCcceEEEeCCCCEEEEEECCCC--------cEEEEecCCCceEEEecCCCceE-----EEEEE--CCEEEEE
Q psy5751 132 -----LKLPNSLAVDFRTDELCWVDADSK--------SLECMTIRNRVRRKVYSNCTYPF-----GLSIT--DEKYYWT 190 (232)
Q Consensus 132 -----~~~p~~l~~d~~~~~Ly~~d~~~~--------~i~~~~~~g~~~~~~~~~~~~p~-----gla~~--~~~ly~t 190 (232)
+..|.+|+||+. ++|+++.-+.. -+..+...+.++-++...+..|. |.++. ...+|+.
T Consensus 494 ~~~~~f~~PDnl~fD~~-GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 494 INANWFNSPDNLAFDPW-GRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred cccccccCCCceEECCC-CCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEE
Confidence 345999999998 88887744321 34455555555555655555555 44552 3466665
No 165
>KOG1539|consensus
Probab=92.58 E-value=7.1 Score=35.55 Aligned_cols=142 Identities=18% Similarity=0.103 Sum_probs=82.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..|++.|. .+++.++-..++ -+.-.++.+......+.-+ ..+.++...-.. -++.+-...-.|.++|.......-.
T Consensus 496 V~gla~D~-~n~~~vsa~~~G-ilkfw~f~~k~l~~~l~l~-~~~~~iv~hr~s-~l~a~~~ddf~I~vvD~~t~kvvR~ 571 (910)
T KOG1539|consen 496 VTGLAVDG-TNRLLVSAGADG-ILKFWDFKKKVLKKSLRLG-SSITGIVYHRVS-DLLAIALDDFSIRVVDVVTRKVVRE 571 (910)
T ss_pred eeEEEecC-CCceEEEccCcc-eEEEEecCCcceeeeeccC-CCcceeeeeehh-hhhhhhcCceeEEEEEchhhhhhHH
Confidence 35778886 555555555545 4555566654422222111 234444444333 3444444455788888766554333
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
+....++..+++++|.+++|..+... ..|...++-.... ..+.-. ..+..+.++|.++.|-.+...
T Consensus 572 f~gh~nritd~~FS~DgrWlisasmD---~tIr~wDlpt~~lID~~~vd---~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 572 FWGHGNRITDMTFSPDGRWLISASMD---STIRTWDLPTGTLIDGLLVD---SPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred hhccccceeeeEeCCCCcEEEEeecC---CcEEEEeccCcceeeeEecC---CcceeeEECCCCCEEEEEEec
Confidence 44577889999999988988888765 3588888654432 222221 245678888876666555443
No 166
>KOG0294|consensus
Probab=92.55 E-value=4.7 Score=32.47 Aligned_cols=201 Identities=11% Similarity=0.043 Sum_probs=103.8
Q ss_pred EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCC--eEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceE
Q psy5751 14 VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNR--VLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRG 91 (232)
Q Consensus 14 ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ 91 (232)
-|++.....-+|..+++.....--.+...-..+..+.++.... .|. +-..++.|...+.+.=...--+..+-.+..+
T Consensus 54 ~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLl-S~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~ 132 (362)
T KOG0294|consen 54 PYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLL-SGSDDGHIIIWRVGSWELLKSLKAHKGQVTD 132 (362)
T ss_pred eeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhhee-eecCCCcEEEEEcCCeEEeeeecccccccce
Confidence 4555433322788888886432222222345677777776442 343 5566678887776543222222234556899
Q ss_pred EEEeCCCCeEEEEEcCCCCCcEEEEeC-CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751 92 IVVHPYYRKLFWSDWNRSGPKIEWSNL-DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV 170 (232)
Q Consensus 92 iavd~~~~~ly~~d~~~~~~~I~~~~~-~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~ 170 (232)
++++| .+.|-.+-.+ ...+...++ .|...-++-. -+.+.-+.+++.+.+.++.- .++|....++....-..
T Consensus 133 lsiHP-S~KLALsVg~--D~~lr~WNLV~Gr~a~v~~L---~~~at~v~w~~~Gd~F~v~~--~~~i~i~q~d~A~v~~~ 204 (362)
T KOG0294|consen 133 LSIHP-SGKLALSVGG--DQVLRTWNLVRGRVAFVLNL---KNKATLVSWSPQGDHFVVSG--RNKIDIYQLDNASVFRE 204 (362)
T ss_pred eEecC-CCceEEEEcC--CceeeeehhhcCccceeecc---CCcceeeEEcCCCCEEEEEe--ccEEEEEecccHhHhhh
Confidence 99999 6777666544 345666665 3443333322 34566688888766555443 44555555554332222
Q ss_pred ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEc
Q psy5751 171 YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 171 ~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
.+....+..+.+. ++.|.+. ..+..|...+-+ +.....+ ..+.++..+|+++.
T Consensus 205 i~~~~r~l~~~~l~~~~L~vG-~d~~~i~~~D~ds~~~~~~~---~AH~~RVK~i~~~~ 259 (362)
T KOG0294|consen 205 IENPKRILCATFLDGSELLVG-GDNEWISLKDTDSDTPLTEF---LAHENRVKDIASYT 259 (362)
T ss_pred hhccccceeeeecCCceEEEe-cCCceEEEeccCCCccceee---ecchhheeeeEEEe
Confidence 2233444555543 4444443 223344444444 2222222 24455556665544
No 167
>KOG2048|consensus
Probab=92.55 E-value=7.1 Score=34.57 Aligned_cols=154 Identities=10% Similarity=0.034 Sum_probs=93.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.+.|....+.+|++..... .+..+.+++...+++... ....+.-|++.+.++.|-.++ ..+.|+++++.+...+
T Consensus 433 ~i~ftid~~k~~~~s~~~~-~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~-t~g~I~v~nl~~~~~~ 510 (691)
T KOG2048|consen 433 AISFTIDKNKLFLVSKNIF-SLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS-TRGQIFVYNLETLESH 510 (691)
T ss_pred eeEEEecCceEEEEecccc-eeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe-ccceEEEEEcccceee
Confidence 3445555677777775555 788888887655444321 345667788888888887777 5588999999998766
Q ss_pred EEEeCCCCCceEEEEe-CCCCeEEEEEcCCCCCcEEEEeCCCCCcE--------EEEEc--CCCCCcceEEEeCCCCEEE
Q psy5751 80 VIVSKDLVNPRGIVVH-PYYRKLFWSDWNRSGPKIEWSNLDGTDRE--------IFLKA--ADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd-~~~~~ly~~d~~~~~~~I~~~~~~g~~~~--------~~~~~--~~~~~p~~l~~d~~~~~Ly 148 (232)
.+...-......+++. +..+.|-++..+ ++++..+++..+.. .+... .......|+.+|+.+...+
T Consensus 511 ~l~~rln~~vTa~~~~~~~~~~lvvats~---nQv~efdi~~~~l~~ws~~nt~nlpk~~~~l~~~~~gisfd~~n~s~~ 587 (691)
T KOG2048|consen 511 LLKVRLNIDVTAAAFSPFVRNRLVVATSN---NQVFEFDIEARNLTRWSKNNTRNLPKEPKTLIPGIPGISFDPKNSSRF 587 (691)
T ss_pred cchhccCcceeeeeccccccCcEEEEecC---CeEEEEecchhhhhhhhhccccccccChhhcCCCCceEEeCCCCccEE
Confidence 5553111333455555 445677777653 45777776433211 11110 0134567999998877666
Q ss_pred EEECCCCcEEEEecC
Q psy5751 149 WVDADSKSLECMTIR 163 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~ 163 (232)
|.- ..+-+..++.+
T Consensus 588 ~~~-~a~w~~~id~~ 601 (691)
T KOG2048|consen 588 IVY-DAHWSCLIDFS 601 (691)
T ss_pred EEE-cCcEEEEEecC
Confidence 663 23344455554
No 168
>KOG0272|consensus
Probab=92.49 E-value=5.6 Score=33.23 Aligned_cols=192 Identities=13% Similarity=0.042 Sum_probs=106.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|++......++.++++-.-.+ .......+.-+...++........++.+.+.. +.-..+-...+.+...++++.....
T Consensus 177 Pis~~~fS~ds~~laT~swsG-~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~ 255 (459)
T KOG0272|consen 177 PISGCSFSRDSKHLATGSWSG-LVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQ 255 (459)
T ss_pred cceeeEeecCCCeEEEeecCC-ceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchh
Confidence 444444445566666654444 45555555444333444445678888888862 4333355556667777777654333
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~ 158 (232)
-+..+..+...++++|.++.|--+-... .-++ .++.. ..+.+.....-....++++.++ |-|--+-.. .++||
T Consensus 256 ~l~gH~~RVs~VafHPsG~~L~TasfD~-tWRl--WD~~t-k~ElL~QEGHs~~v~~iaf~~D-GSL~~tGGlD~~~RvW 330 (459)
T KOG0272|consen 256 DLEGHLARVSRVAFHPSGKFLGTASFDS-TWRL--WDLET-KSELLLQEGHSKGVFSIAFQPD-GSLAATGGLDSLGRVW 330 (459)
T ss_pred hhhcchhhheeeeecCCCceeeeccccc-chhh--ccccc-chhhHhhcccccccceeEecCC-CceeeccCccchhhee
Confidence 3335677888999999555544333321 2223 33332 2333333333556778999987 555444222 23444
Q ss_pred EEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751 159 CMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 159 ~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~ 201 (232)
|++.+....+++ .+....++++. +|+..-|-...+.+..-+
T Consensus 331 --DlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWD 373 (459)
T KOG0272|consen 331 --DLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWD 373 (459)
T ss_pred --ecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEee
Confidence 466555555544 55666788885 777777766555433333
No 169
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=92.49 E-value=5.4 Score=33.07 Aligned_cols=134 Identities=10% Similarity=-0.003 Sum_probs=72.9
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCC
Q psy5751 55 NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKL 134 (232)
Q Consensus 55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 134 (232)
++.+|++.. .+.++.++..... .+...........+++ ++++|+... .++++.++.......--.....-..
T Consensus 241 ~~~vy~~~~-~g~l~a~d~~tG~--~~W~~~~~~~~~p~~~--~~~vyv~~~---~G~l~~~d~~tG~~~W~~~~~~~~~ 312 (377)
T TIGR03300 241 GGQVYAVSY-QGRVAALDLRSGR--VLWKRDASSYQGPAVD--DNRLYVTDA---DGVVVALDRRSGSELWKNDELKYRQ 312 (377)
T ss_pred CCEEEEEEc-CCEEEEEECCCCc--EEEeeccCCccCceEe--CCEEEEECC---CCeEEEEECCCCcEEEccccccCCc
Confidence 578887765 4678888875443 2232223334455666 789999873 4668888885443221111100011
Q ss_pred cceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCC--ceEEEEEECCEEEEEeCCCCcEEEE
Q psy5751 135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCT--YPFGLSITDEKYYWTDWKTNRIESA 200 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~--~p~gla~~~~~ly~td~~~~~i~~~ 200 (232)
.....+. +++||+.+ ..+.+..++.+.++..--.+... ....-++.+++||+... ++.|+.|
T Consensus 313 ~ssp~i~--g~~l~~~~-~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~-dG~l~~~ 376 (377)
T TIGR03300 313 LTAPAVV--GGYLVVGD-FEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTR-DGDLYAF 376 (377)
T ss_pred cccCEEE--CCEEEEEe-CCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeC-CceEEEe
Confidence 1122232 47888875 46788888887544322222111 11233466788998876 3556654
No 170
>KOG3621|consensus
Probab=92.35 E-value=1.9 Score=38.18 Aligned_cols=170 Identities=11% Similarity=0.043 Sum_probs=93.7
Q ss_pred ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
-..+++....+.|||-....+........|........ .....- +|+-..+|++-|... +......
T Consensus 45 ~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~l--vAagt~~g~V~v~ql----------~~~~p~~ 112 (726)
T KOG3621|consen 45 EEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYL--VAAGTASGRVSVFQL----------NKELPRD 112 (726)
T ss_pred CceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHh--hhhhcCCceEEeehh----------hccCCCc
Confidence 34466666678888888777776666665533221111 111111 122222344333321 1111111
Q ss_pred EEEEEcCC---CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC-----ceEEEecCCCceEEEEEECCEEEEEeCCCC
Q psy5751 124 EIFLKAAD---LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR-----VRRKVYSNCTYPFGLSITDEKYYWTDWKTN 195 (232)
Q Consensus 124 ~~~~~~~~---~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~-----~~~~~~~~~~~p~gla~~~~~ly~td~~~~ 195 (232)
...+...+ -....+++.+++..++|..|. .|+|....++.. +.+.+........-|...+.+|.++.....
T Consensus 113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~-~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~r~ 191 (726)
T KOG3621|consen 113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDS-QGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTLTRC 191 (726)
T ss_pred ceeeccccccCCceEEEEEecccccEEeecCC-CceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhhhhh
Confidence 22222110 224568889999899998876 677888888861 223333333333444556888888776544
Q ss_pred cEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 196 RIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 196 ~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
- .++-..+..+.|-.+.+....++|.-+++.+|
T Consensus 192 ~--Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~ 224 (726)
T KOG3621|consen 192 I--LCQTEAETITQIGKKPRKSLIDFGACFFPGQC 224 (726)
T ss_pred h--eeecchhHHHHhcCCCcCCccccceEEeeccc
Confidence 2 34444445555665555666789999999999
No 171
>KOG0277|consensus
Probab=92.28 E-value=4.5 Score=31.64 Aligned_cols=119 Identities=13% Similarity=-0.016 Sum_probs=70.8
Q ss_pred CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE 124 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~ 124 (232)
+..++......+..+.+.+-.+.|-..+.+-......+..+.......+.+|.-..||-+.++-...+|+-++..|....
T Consensus 106 EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~ 185 (311)
T KOG0277|consen 106 EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS 185 (311)
T ss_pred heEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE
Confidence 44444444455677777777777777776665544444455556677778887788877766544556666555555444
Q ss_pred EEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 125 IFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 125 ~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
+.... ...-..-....+..+.++-...+.|...|++.-+
T Consensus 186 i~ah~---~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r 224 (311)
T KOG0277|consen 186 IEAHN---SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR 224 (311)
T ss_pred EEecc---ceeEeecccccCCcEEEecCCCceEEEEehhhcc
Confidence 22221 1222333445556777776667777777776543
No 172
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=92.24 E-value=4.1 Score=31.07 Aligned_cols=142 Identities=14% Similarity=0.140 Sum_probs=72.5
Q ss_pred CCEEEEEEcCCCCcEEEEEcC-CCceeEEEe-C--C--CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVIT-T--N--IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK 84 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~-~--~--~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 84 (232)
++.+|+.. .++ +|+.++.. |....+... . . ...+...+++ ++.+|+... .+.|..+|+......--...
T Consensus 76 ~~~v~v~~-~~~-~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 76 GGRVYVGT-SDG-SLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD--GDRLYVGTS-SGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp TTEEEEEE-TTS-EEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE--TTEEEEEET-CSEEEEEETTTTEEEEEEES
T ss_pred cccccccc-cee-eeEecccCCcceeeeeccccccccccccccCceEe--cCEEEEEec-cCcEEEEecCCCcEEEEeec
Confidence 45666655 223 57777743 444333211 1 1 1223334444 566776664 46777777654432211111
Q ss_pred CC---CC-------c-eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 85 DL---VN-------P-RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 85 ~~---~~-------p-~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
.. .. . ..+.++ ++.+|++... +.+..+++...... . ... ...+.++ ....++.||+++ .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~---g~~~~~d~~tg~~~-w-~~~-~~~~~~~-~~~~~~~l~~~~-~ 220 (238)
T PF13360_consen 151 GEPRGSSPISSFSDINGSPVIS--DGRVYVSSGD---GRVVAVDLATGEKL-W-SKP-ISGIYSL-PSVDGGTLYVTS-S 220 (238)
T ss_dssp STT-SS--EEEETTEEEEEECC--TTEEEEECCT---SSEEEEETTTTEEE-E-EEC-SS-ECEC-EECCCTEEEEEE-T
T ss_pred CCCCCCcceeeecccccceEEE--CCEEEEEcCC---CeEEEEECCCCCEE-E-Eec-CCCccCC-ceeeCCEEEEEe-C
Confidence 11 01 1 223333 5688887754 23555566655433 2 332 3344442 345568888888 6
Q ss_pred CCcEEEEecCCCce
Q psy5751 154 SKSLECMTIRNRVR 167 (232)
Q Consensus 154 ~~~i~~~~~~g~~~ 167 (232)
.++++++++..++.
T Consensus 221 ~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 221 DGRLYALDLKTGKV 234 (238)
T ss_dssp TTEEEEEETTTTEE
T ss_pred CCEEEEEECCCCCE
Confidence 78899998887654
No 173
>KOG0303|consensus
Probab=92.24 E-value=5.9 Score=32.92 Aligned_cols=155 Identities=14% Similarity=0.154 Sum_probs=89.5
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE--
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV-- 82 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-- 82 (232)
++|++.-..+..+...++ .|...+...... .+......-+.++.+.. ++.++++-.....|.++|........-.
T Consensus 137 V~wHPtA~NVLlsag~Dn-~v~iWnv~tgea-li~l~hpd~i~S~sfn~-dGs~l~TtckDKkvRv~dpr~~~~v~e~~~ 213 (472)
T KOG0303|consen 137 VQWHPTAPNVLLSAGSDN-TVSIWNVGTGEA-LITLDHPDMVYSMSFNR-DGSLLCTTCKDKKVRVIDPRRGTVVSEGVA 213 (472)
T ss_pred EeecccchhhHhhccCCc-eEEEEeccCCce-eeecCCCCeEEEEEecc-CCceeeeecccceeEEEcCCCCcEeeeccc
Confidence 445554444444444555 666666664332 22222234567778877 5667788888889999987655432221
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE---eCCCCEEEEEECCCCcEE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNSLAV---DFRTDELCWVDADSKSLE 158 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~---d~~~~~Ly~~d~~~~~i~ 158 (232)
.++...++.+.+. ++.++-|...+ ...++-..+.+.-.....+.. +..-+|+-+ |++++.+|.+--+.+.|.
T Consensus 214 heG~k~~Raifl~--~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~e--lDtSnGvl~PFyD~dt~ivYl~GKGD~~IR 289 (472)
T KOG0303|consen 214 HEGAKPARAIFLA--SGKIFTTGFSRMSERQIALWDPNNLEEPIALQE--LDTSNGVLLPFYDPDTSIVYLCGKGDSSIR 289 (472)
T ss_pred ccCCCcceeEEec--cCceeeeccccccccceeccCcccccCcceeEE--eccCCceEEeeecCCCCEEEEEecCCcceE
Confidence 2344445566665 56666664321 122333333332222222222 566677755 888899999988888888
Q ss_pred EEecCCCc
Q psy5751 159 CMTIRNRV 166 (232)
Q Consensus 159 ~~~~~g~~ 166 (232)
.+.+....
T Consensus 290 YyEit~d~ 297 (472)
T KOG0303|consen 290 YFEITNEP 297 (472)
T ss_pred EEEecCCC
Confidence 88776544
No 174
>KOG0308|consensus
Probab=92.06 E-value=8.2 Score=34.18 Aligned_cols=153 Identities=10% Similarity=-0.010 Sum_probs=100.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE-----------EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV-----------ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN 72 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~-----------~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~ 72 (232)
.+++-..++.|+.+--.++ +|+..+++....+.+ ........+++|... ++.++++....+-|...|
T Consensus 122 cla~~ak~~~lvaSgGLD~-~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wD 199 (735)
T KOG0308|consen 122 CLAYIAKNNELVASGGLDR-KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWD 199 (735)
T ss_pred eeeecccCceeEEecCCCc-cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cceEEEecCcccceEEec
Confidence 5666667888888887777 999999984311111 111234567788776 567887777777788888
Q ss_pred CCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc--EEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751 73 LNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR--EIFLKAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 73 ~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~--~~~~~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
........-+..+..+.+.+.++..+.++.-+.+ .+.|...++.-+.- +..+.. .....+..++.=..+|..
T Consensus 200 prt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sS---DgtIrlWdLgqQrCl~T~~vH~---e~VWaL~~~~sf~~vYsG 273 (735)
T KOG0308|consen 200 PRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASS---DGTIRLWDLGQQRCLATYIVHK---EGVWALQSSPSFTHVYSG 273 (735)
T ss_pred cccccceeeeeccccceEEEEEcCCCCeEeecCC---CceEEeeeccccceeeeEEecc---CceEEEeeCCCcceEEec
Confidence 8777666555567788899999986556655443 45687777764432 112222 235566667665677766
Q ss_pred ECCCCcEEEEecCCC
Q psy5751 151 DADSKSLECMTIRNR 165 (232)
Q Consensus 151 d~~~~~i~~~~~~g~ 165 (232)
+ ..+.|++.++..-
T Consensus 274 ~-rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 274 G-RDGNIYRTDLRNP 287 (735)
T ss_pred C-CCCcEEecccCCc
Confidence 4 4678999999874
No 175
>KOG0264|consensus
Probab=92.06 E-value=6.4 Score=32.95 Aligned_cols=158 Identities=7% Similarity=0.101 Sum_probs=101.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
.|+.|+.......++-..+. .|...+++.... ..++...-...+.+++......||-+-...+.+...|...
T Consensus 181 ~glsWn~~~~g~Lls~~~d~-~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~ 259 (422)
T KOG0264|consen 181 YGLSWNRQQEGTLLSGSDDH-TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS 259 (422)
T ss_pred cccccccccceeEeeccCCC-cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence 35666665555555554555 778777775433 1223333467788999988899998888888999998774
Q ss_pred --CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 76 --DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 76 --~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
.........+....+.+++.|.++.|.-+... ...+...++..-..........-.....+..+|.+..+.-+...
T Consensus 260 ~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~--D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~ 337 (422)
T KOG0264|consen 260 NTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSA--DKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGT 337 (422)
T ss_pred CCCCCcccccccCCceeEEEeCCCCCceEEeccC--CCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEeccc
Confidence 33333333355677899999999888777653 34566666654433222222112344567778887777766666
Q ss_pred CCcEEEEecC
Q psy5751 154 SKSLECMTIR 163 (232)
Q Consensus 154 ~~~i~~~~~~ 163 (232)
.+++...|++
T Consensus 338 D~rl~vWDls 347 (422)
T KOG0264|consen 338 DRRLNVWDLS 347 (422)
T ss_pred CCcEEEEecc
Confidence 6777777776
No 176
>KOG0639|consensus
Probab=91.71 E-value=8 Score=33.29 Aligned_cols=178 Identities=12% Similarity=0.074 Sum_probs=100.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+++.++ +..|.++...++ .|...++.....-..+.........|.+...+-+| |+..-.+.+...|+..... +..
T Consensus 514 ALa~sp-DakvcFsccsdG-nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtkl-WTGGlDntvRcWDlregrq--lqq 588 (705)
T KOG0639|consen 514 ALAISP-DAKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKL-WTGGLDNTVRCWDLREGRQ--LQQ 588 (705)
T ss_pred hhhcCC-ccceeeeeccCC-cEEEEEcccceeeecccCCCCCceeEEecCCCcee-ecCCCccceeehhhhhhhh--hhh
Confidence 456666 566777777777 89999998644323333344567778787655555 6877777788777644321 111
Q ss_pred -CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEEEE
Q psy5751 84 -KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLECM 160 (232)
Q Consensus 84 -~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~~~ 160 (232)
.--....++...|...+|-+-. +++.++.....+..+-.+... -.-.-.|.|.+. |+-|++-...+ ..|+.
T Consensus 589 hdF~SQIfSLg~cP~~dWlavGM---ens~vevlh~skp~kyqlhlh--eScVLSlKFa~c-GkwfvStGkDnlLnawrt 662 (705)
T KOG0639|consen 589 HDFSSQIFSLGYCPTGDWLAVGM---ENSNVEVLHTSKPEKYQLHLH--ESCVLSLKFAYC-GKWFVSTGKDNLLNAWRT 662 (705)
T ss_pred hhhhhhheecccCCCccceeeec---ccCcEEEEecCCccceeeccc--ccEEEEEEeccc-CceeeecCchhhhhhccC
Confidence 1123456677787666554443 456677777766655444332 123345666665 55555544444 34443
Q ss_pred ecCCCceEEEec-CCCceEEEEE-ECCEEEEEeCCCC
Q psy5751 161 TIRNRVRRKVYS-NCTYPFGLSI-TDEKYYWTDWKTN 195 (232)
Q Consensus 161 ~~~g~~~~~~~~-~~~~p~gla~-~~~~ly~td~~~~ 195 (232)
.+- .. ++.. ......++.+ .++++.||-.+..
T Consensus 663 PyG-as--iFqskE~SsVlsCDIS~ddkyIVTGSGdk 696 (705)
T KOG0639|consen 663 PYG-AS--IFQSKESSSVLSCDISFDDKYIVTGSGDK 696 (705)
T ss_pred ccc-cc--eeeccccCcceeeeeccCceEEEecCCCc
Confidence 332 22 2222 2333345555 4778888776553
No 177
>KOG0308|consensus
Probab=91.47 E-value=9.6 Score=33.77 Aligned_cols=151 Identities=11% Similarity=0.107 Sum_probs=93.9
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+++.+. ++.++++-..++ .|+..+.....+..-+.........|-++..+.++. +-...+.|...++.-+.+...+.
T Consensus 176 SLA~N~-t~t~ivsGgtek-~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~l-s~sSDgtIrlWdLgqQrCl~T~~ 252 (735)
T KOG0308|consen 176 SLAMNQ-TGTIIVSGGTEK-DLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLL-SASSDGTIRLWDLGQQRCLATYI 252 (735)
T ss_pred eeecCC-cceEEEecCccc-ceEEeccccccceeeeeccccceEEEEEcCCCCeEe-ecCCCceEEeeeccccceeeeEE
Confidence 455544 556776666666 677777665443223334456788888888777775 65666889999998777654444
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
-.-...+++..++.-..+|..+.. +.|++.++......+++-.. -.....+.++....-+ |+-+..+.|.|...
T Consensus 253 vH~e~VWaL~~~~sf~~vYsG~rd---~~i~~Tdl~n~~~~tlick~-daPv~~l~~~~~~~~~-WvtTtds~I~rW~~ 326 (735)
T KOG0308|consen 253 VHKEGVWALQSSPSFTHVYSGGRD---GNIYRTDLRNPAKSTLICKE-DAPVLKLHLHEHDNSV-WVTTTDSSIKRWKL 326 (735)
T ss_pred eccCceEEEeeCCCcceEEecCCC---CcEEecccCCchhheEeecC-CCchhhhhhccccCCc-eeeeccccceecCC
Confidence 344458899999877888887754 46999999875444433322 2333455555443344 55555555665443
No 178
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=91.46 E-value=6.7 Score=34.30 Aligned_cols=112 Identities=11% Similarity=0.031 Sum_probs=64.0
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCC----------------eEEEEeCCCCC-------CEEEEe---------------
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMD----------------TISMANLNDDQ-------PKVIVS--------------- 83 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~----------------~I~~~~~~g~~-------~~~~~~--------------- 83 (232)
.+..|+++++.+..+.+|++.+.++ +|+++-..+.. -..++.
T Consensus 415 ~mdRpE~i~~~p~~g~Vy~~lTNn~~r~~~~aNpr~~n~~G~I~r~~p~~~d~t~~~ftWdlF~~aG~~~~~~~~~~~~~ 494 (616)
T COG3211 415 PMDRPEWIAVNPGTGEVYFTLTNNGKRSDDAANPRAKNGYGQIVRWIPATGDHTDTKFTWDLFVEAGNPSVLEGGASANI 494 (616)
T ss_pred cccCccceeecCCcceEEEEeCCCCccccccCCCcccccccceEEEecCCCCccCccceeeeeeecCCccccccccccCc
Confidence 4568999999999999999976543 67776544421 112221
Q ss_pred --CCCCCceEEEEeCCCCeEEEEEcCCC---CCc---EEEEeCCCCC---cEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 84 --KDLVNPRGIVVHPYYRKLFWSDWNRS---GPK---IEWSNLDGTD---REIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 84 --~~~~~p~~iavd~~~~~ly~~d~~~~---~~~---I~~~~~~g~~---~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
..++.|.+|++|+ .|+|+++.-+.. ... +..+...+.. ....+..+.-..-.|.++.++.+.||+.-.
T Consensus 495 ~~~~f~~PDnl~fD~-~GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~vQ 573 (616)
T COG3211 495 NANWFNSPDNLAFDP-WGRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVNVQ 573 (616)
T ss_pred ccccccCCCceEECC-CCCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEEec
Confidence 1255699999998 677777643211 110 1111111111 112222210123458899999999999865
Q ss_pred CC
Q psy5751 153 DS 154 (232)
Q Consensus 153 ~~ 154 (232)
+-
T Consensus 574 HP 575 (616)
T COG3211 574 HP 575 (616)
T ss_pred CC
Confidence 43
No 179
>KOG0276|consensus
Probab=91.40 E-value=9.7 Score=33.69 Aligned_cols=195 Identities=9% Similarity=0.007 Sum_probs=107.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
-++++++.+-++ .+...++ .+...+.+....-+-+. ... ..+.-.+-. ..+..++.+...+|.+.+++...+...
T Consensus 17 KsVd~HPtePw~-la~LynG-~V~IWnyetqtmVksfeV~~~-PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ekV~~ 92 (794)
T KOG0276|consen 17 KSVDFHPTEPWI-LAALYNG-DVQIWNYETQTMVKSFEVSEV-PVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEKVKT 92 (794)
T ss_pred eeeecCCCCceE-EEeeecC-eeEEEecccceeeeeeeeccc-chhhheeee-ccceEEEecCCceEEEEecccceeeEE
Confidence 478888844444 4455555 56666666432211111 111 223333443 344556777778999999988877777
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
++-+....+.++++|..= .+.+.+. .-.|...+.++.-.....-+.+-+....++|.|....-|.+-+-...|....
T Consensus 93 FeAH~DyIR~iavHPt~P-~vLtsSD--Dm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs 169 (794)
T KOG0276|consen 93 FEAHSDYIRSIAVHPTLP-YVLTSSD--DMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWS 169 (794)
T ss_pred eeccccceeeeeecCCCC-eEEecCC--ccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEE
Confidence 776777889999999444 3333322 4457777777664433333333667788999997666666655455444444
Q ss_pred cCCCce-EEEecCCCceEEEEEE--CCEEE-EEeCCCCcEEEEeCCC
Q psy5751 162 IRNRVR-RKVYSNCTYPFGLSIT--DEKYY-WTDWKTNRIESANKEG 204 (232)
Q Consensus 162 ~~g~~~-~~~~~~~~~p~gla~~--~~~ly-~td~~~~~i~~~~~~g 204 (232)
+..... .++.......+.+.++ +++-| +|-.....+..-+.++
T Consensus 170 lgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt 216 (794)
T KOG0276|consen 170 LGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT 216 (794)
T ss_pred cCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch
Confidence 433222 1222233334455553 33333 3334444444444443
No 180
>KOG0273|consensus
Probab=91.25 E-value=8.5 Score=32.72 Aligned_cols=73 Identities=19% Similarity=0.172 Sum_probs=55.3
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~ 117 (232)
....++.|||+++.=|.+....+.|+++.++...+...+..+-+..++|..+| ++.|.-+-..-...+|+-+.
T Consensus 317 ~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~ 389 (524)
T KOG0273|consen 317 HSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMG 389 (524)
T ss_pred ccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC-CCceEEEecCCCeeEeeecC
Confidence 45557999999999999998889999999999887665555777889999998 56666554432355666543
No 181
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=91.22 E-value=6.1 Score=31.03 Aligned_cols=101 Identities=14% Similarity=0.090 Sum_probs=59.4
Q ss_pred EeCCCCeEEEEeCCCCC--CEEEEe------CCCCCceEEEEeC--CCCeEEEEEcCCCCCcEEEEeCC----CCCcEEE
Q psy5751 61 TDSQMDTISMANLNDDQ--PKVIVS------KDLVNPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNLD----GTDREIF 126 (232)
Q Consensus 61 ~d~~~~~I~~~~~~g~~--~~~~~~------~~~~~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~~----g~~~~~~ 126 (232)
+|..+..|..+.+++.. .+.+.. ++...+.|+++.. ..|-+|+.-.++ .+.|..+.+- |......
T Consensus 119 SdR~~~~i~~y~Idp~~~~L~sitD~n~p~ss~~s~~YGl~lyrs~ktgd~yvfV~~~-qG~~~Qy~l~d~gnGkv~~k~ 197 (364)
T COG4247 119 SDRQNDKIVFYKIDPNPQYLESITDSNAPYSSSSSSAYGLALYRSPKTGDYYVFVNRR-QGDIAQYKLIDQGNGKVGTKL 197 (364)
T ss_pred ccccCCeEEEEEeCCCccceeeccCCCCccccCcccceeeEEEecCCcCcEEEEEecC-CCceeEEEEEecCCceEccee
Confidence 45556677766666544 333332 4677888988653 346666665543 3567666642 2111112
Q ss_pred EEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 127 LKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 127 ~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
+.. ..-.+..|+..|...+.||.++.. --||....+
T Consensus 198 vR~fk~~tQTEG~VaDdEtG~LYIaeEd-vaiWK~~Ae 234 (364)
T COG4247 198 VRQFKIPTQTEGMVADDETGFLYIAEED-VAIWKYEAE 234 (364)
T ss_pred eEeeecCCcccceeeccccceEEEeecc-ceeeecccC
Confidence 211 112466799999999999999753 347777654
No 182
>KOG0282|consensus
Probab=91.13 E-value=7.1 Score=33.20 Aligned_cols=192 Identities=13% Similarity=0.054 Sum_probs=111.9
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
++.|.+....|+.+-..+. .|+..++-+... -.........+..++....+..+. +-.....|-..|...+.+...+
T Consensus 219 ai~~fp~~~hLlLS~gmD~-~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fL-S~sfD~~lKlwDtETG~~~~~f 296 (503)
T KOG0282|consen 219 AIQWFPKKGHLLLSGGMDG-LVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFL-SASFDRFLKLWDTETGQVLSRF 296 (503)
T ss_pred hhhhccceeeEEEecCCCc-eEEEEEEecCcceehhhhcchhhhhhhhccccCCeee-eeecceeeeeeccccceEEEEE
Confidence 5566677788888887777 777776654221 111222224556666665444333 4444556667777776666655
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
. ....|.-+-..|.+..+|++... ..+|...++....+..-... ++...+.+.|-+. ++=|++.+....+...+.
T Consensus 297 ~-~~~~~~cvkf~pd~~n~fl~G~s--d~ki~~wDiRs~kvvqeYd~-hLg~i~~i~F~~~-g~rFissSDdks~riWe~ 371 (503)
T KOG0282|consen 297 H-LDKVPTCVKFHPDNQNIFLVGGS--DKKIRQWDIRSGKVVQEYDR-HLGAILDITFVDE-GRRFISSSDDKSVRIWEN 371 (503)
T ss_pred e-cCCCceeeecCCCCCcEEEEecC--CCcEEEEeccchHHHHHHHh-hhhheeeeEEccC-CceEeeeccCccEEEEEc
Confidence 5 33467778888877788888754 67899888876542211122 2777788888776 444555554444444444
Q ss_pred CCC-ceEEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 163 RNR-VRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 163 ~g~-~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+-. ..+.++. +...| .+++. ++..+.++...++|..+...
T Consensus 372 ~~~v~ik~i~~~~~hsmP-~~~~~P~~~~~~aQs~dN~i~ifs~~ 415 (503)
T KOG0282|consen 372 RIPVPIKNIADPEMHTMP-CLTLHPNGKWFAAQSMDNYIAIFSTV 415 (503)
T ss_pred CCCccchhhcchhhccCc-ceecCCCCCeehhhccCceEEEEecc
Confidence 322 2222222 22222 34554 66777777777777777643
No 183
>KOG3914|consensus
Probab=91.05 E-value=7.9 Score=32.04 Aligned_cols=163 Identities=10% Similarity=0.043 Sum_probs=94.0
Q ss_pred CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
.+..+...+..+.|++++.. .+....++.+... ..+.. .--.+|..+.+.......-+++..++...+...+.+..
T Consensus 64 a~~~~~~s~~~~llAv~~~~-K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSS-KQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG 142 (390)
T ss_pred cccccccCCCceEEEEEeCC-CceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence 34444555556677777665 3444455444442 11111 23456778887776777788886655544554444422
Q ss_pred CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecCCCceEEEEEECCEEEEEeCCCCcEEE
Q psy5751 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSNCTYPFGLSITDEKYYWTDWKTNRIES 199 (232)
Q Consensus 122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~~~~p~gla~~~~~ly~td~~~~~i~~ 199 (232)
..+.++-. +.--.++++.++..+|..+|. ..+|+...+..... +.+ +..-.-...+++..+.+.|+-.+.+.|+.
T Consensus 143 ~~~~~lGh--vSml~dVavS~D~~~IitaDR-DEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 143 RCEPILGH--VSMLLDVAVSPDDQFIITADR-DEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRL 219 (390)
T ss_pred Ccchhhhh--hhhhheeeecCCCCEEEEecC-CceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEE
Confidence 22222222 556788999999888888875 55677777765432 111 11111134667777777787777777777
Q ss_pred EeCC-CCCcceEE
Q psy5751 200 ANKE-GERAPSIA 211 (232)
Q Consensus 200 ~~~~-g~~~~~i~ 211 (232)
=+.. |+.+....
T Consensus 220 Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 220 WDITSGKLLDTCD 232 (390)
T ss_pred EecccCCcccccc
Confidence 7765 56555443
No 184
>PHA02713 hypothetical protein; Provisional
Probab=90.96 E-value=11 Score=33.42 Aligned_cols=191 Identities=10% Similarity=0.081 Sum_probs=100.9
Q ss_pred CCEEEEEEcCC-C----CcEEEEEcCCCceeEEEeCCCCCcc-EEEEeecCCeEEEEeCCC-----CeEEEEeCCCCCCE
Q psy5751 11 EGQVYYSSVAD-K----SSIKRAHLDGKNVEDVITTNIRSPE-GLTFDWVNRVLYWTDSQM-----DTISMANLNDDQPK 79 (232)
Q Consensus 11 ~~~ly~~d~~~-~----~~i~~~~~~g~~~~~~~~~~~~~p~-gl~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~ 79 (232)
++.||+.--.. + ..+.++++......+ +. .+..+. +.++-..++.||+....+ ..+.++|+....=.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~-~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~ 380 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVE-LP-PMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWK 380 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEee-CC-CCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence 56788774321 1 146777776554322 22 222222 223333368899876542 34777776643211
Q ss_pred EEEeCCCCCce---EEEEeCCCCeEEEEEcCCC---------------------CCcEEEEeCCCCCcEEEEEcCC-CCC
Q psy5751 80 VIVSKDLVNPR---GIVVHPYYRKLFWSDWNRS---------------------GPKIEWSNLDGTDREIFLKAAD-LKL 134 (232)
Q Consensus 80 ~~~~~~~~~p~---~iavd~~~~~ly~~d~~~~---------------------~~~I~~~~~~g~~~~~~~~~~~-~~~ 134 (232)
.+ ..+..|+ ++++. +|.||+...... ...++++++....=+.+..... ...
T Consensus 381 ~~--~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~ 456 (557)
T PHA02713 381 ML--PDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIR 456 (557)
T ss_pred EC--CCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCccccc
Confidence 11 1233332 34444 799999753211 1346666655432222211110 112
Q ss_pred cceEEEeCCCCEEEEEECCC------CcEEEEecCC-CceEEEecCCCce---EEEEEECCEEEEEeCCCC--cEEEEeC
Q psy5751 135 PNSLAVDFRTDELCWVDADS------KSLECMTIRN-RVRRKVYSNCTYP---FGLSITDEKYYWTDWKTN--RIESANK 202 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~~~------~~i~~~~~~g-~~~~~~~~~~~~p---~gla~~~~~ly~td~~~~--~i~~~~~ 202 (232)
+ ++++- +++||+.-... ..+++.+++. ..-+.+ ..++.+ .|+++.+|+||++-..++ .+.++++
T Consensus 457 ~-~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~-~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 457 P-GVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELI-TTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred C-cEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEc-cccCcccccceeEEECCEEEEEeeecceeehhhcCc
Confidence 2 33322 38999984321 3478888886 333333 233333 488889999999865444 6788888
Q ss_pred CCCCcceEE
Q psy5751 203 EGERAPSIA 211 (232)
Q Consensus 203 ~g~~~~~i~ 211 (232)
....++.+.
T Consensus 533 ~~~~W~~~~ 541 (557)
T PHA02713 533 YTYEWNHIC 541 (557)
T ss_pred ccccccchh
Confidence 877777543
No 185
>KOG0286|consensus
Probab=90.51 E-value=7.7 Score=30.98 Aligned_cols=138 Identities=12% Similarity=0.064 Sum_probs=89.2
Q ss_pred EEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceE
Q psy5751 60 WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSL 138 (232)
Q Consensus 60 ~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l 138 (232)
.|.++....-..|++.......+..+..+..++.+.|.+++.|++-..-...+++ ++.... ++.+... ..-.|.+
T Consensus 160 lT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklW--D~R~~~c~qtF~gh--esDINsv 235 (343)
T KOG0286|consen 160 LTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLW--DVRSGQCVQTFEGH--ESDINSV 235 (343)
T ss_pred EecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeee--eccCcceeEeeccc--ccccceE
Confidence 3555656667778777776666667888999999999899999987542344454 333222 3333222 4557888
Q ss_pred EEeCCCCEEEEEECCCCcEEEEecCCCceEEEec--C-CCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 139 AVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS--N-CTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 139 ~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~--~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
.+.|. |.-|.+-+..+....+|++....-.+++ . .....++++- .|+|.++-+....+..-+-
T Consensus 236 ~ffP~-G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 236 RFFPS-GDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred EEccC-CCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 88886 6777776767777788887654433444 2 2333577774 8888888666555544443
No 186
>KOG0282|consensus
Probab=90.42 E-value=5.3 Score=33.90 Aligned_cols=153 Identities=8% Similarity=0.065 Sum_probs=94.5
Q ss_pred CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEEEeCCCCCceEEEEeCCCCeEEEE-EcCCCCCcEEEEeCCCCC
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVIVSKDLVNPRGIVVHPYYRKLFWS-DWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~iavd~~~~~ly~~-d~~~~~~~I~~~~~~g~~ 122 (232)
....+.+=+....|+.+-...+.|...+.-+.. +...+.......++++... .|.=|.+ ... .-|...+.+.+.
T Consensus 216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD---~~lKlwDtETG~ 291 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNN-CGTSFLSASFD---RFLKLWDTETGQ 291 (503)
T ss_pred ccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccc-cCCeeeeeecc---eeeeeeccccce
Confidence 444444555567787777777888887764422 2222222333445666665 3333333 222 224445555444
Q ss_pred cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEE
Q psy5751 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESA 200 (232)
Q Consensus 123 ~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~ 200 (232)
...-+.. -.-|..+.+.+++..+|++=...++|...|++.++. +.....++....+.+ ++++=+++-.....+...
T Consensus 292 ~~~~f~~--~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riW 369 (503)
T KOG0282|consen 292 VLSRFHL--DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIW 369 (503)
T ss_pred EEEEEec--CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEE
Confidence 4444443 467999999999889999988889999999997653 222336666777787 477777776666655555
Q ss_pred eCC
Q psy5751 201 NKE 203 (232)
Q Consensus 201 ~~~ 203 (232)
.-+
T Consensus 370 e~~ 372 (503)
T KOG0282|consen 370 ENR 372 (503)
T ss_pred EcC
Confidence 544
No 187
>KOG0319|consensus
Probab=90.21 E-value=14 Score=33.33 Aligned_cols=197 Identities=11% Similarity=0.034 Sum_probs=111.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeE-EEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVED-VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~-~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
++++.+.++.||.+--. . .+..+.++....-. .-...-.....+++|+.+ .|--+-...+++.+.|+.+..+...+
T Consensus 67 a~~l~~d~~~L~~a~rs-~-llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g-~LlAtggaD~~v~VWdi~~~~~th~f 143 (775)
T KOG0319|consen 67 ALALTPDEEVLVTASRS-Q-LLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTG-TLLATGGADGRVKVWDIKNGYCTHSF 143 (775)
T ss_pred eeeecCCccEEEEeecc-c-eEEEEEcccchHhHhHhhccCCCeEEEEEcCCC-ceEEeccccceEEEEEeeCCEEEEEe
Confidence 56677766777655422 2 45566666432211 111112345678999855 55545555688999999999887777
Q ss_pred eCCCCCceEEEEeCCCCeEEEE-EcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWS-DWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~-d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
.....-...+.+.|.- .+|- -.+...+.+...++.....-...-..+.....+|++.+++..+. +-.....|...+
T Consensus 144 kG~gGvVssl~F~~~~--~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~l-s~~RDkvi~vwd 220 (775)
T KOG0319|consen 144 KGHGGVVSSLLFHPHW--NRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELL-SVGRDKVIIVWD 220 (775)
T ss_pred cCCCceEEEEEeCCcc--chhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEE-EeccCcEEEEee
Confidence 6444455667777532 2322 22334677888887743321000011255678999998855543 334455555666
Q ss_pred cCCCceEEEecCCCceEEEEE-EC-----CEEEEEeCCCCcEEEEeCCCCC
Q psy5751 162 IRNRVRRKVYSNCTYPFGLSI-TD-----EKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 162 ~~g~~~~~~~~~~~~p~gla~-~~-----~~ly~td~~~~~i~~~~~~g~~ 206 (232)
+...+....+.....-.++++ .+ +..+.|-.+++.+...+..+..
T Consensus 221 ~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~ 271 (775)
T KOG0319|consen 221 LVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGK 271 (775)
T ss_pred hhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccch
Confidence 633332223333333445554 33 3467777777888888776544
No 188
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=90.16 E-value=7.7 Score=30.43 Aligned_cols=201 Identities=12% Similarity=0.036 Sum_probs=109.7
Q ss_pred EEEEEeCCCCEEEEEE--cCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEE--eCCCCCC
Q psy5751 3 IGITVDCVEGQVYYSS--VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMA--NLNDDQP 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d--~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~--~~~g~~~ 78 (232)
.+.++.+..+.+.+.. .... .++....++... .+... .......+|.. +.++..+......... ..+|...
T Consensus 27 ~s~AvS~dg~~~A~v~~~~~~~-~L~~~~~~~~~~-~~~~g--~~l~~PS~d~~-g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 27 TSPAVSPDGSRVAAVSEGDGGR-SLYVGPAGGPVR-PVLTG--GSLTRPSWDPD-GWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cceEECCCCCeEEEEEEcCCCC-EEEEEcCCCcce-eeccC--CccccccccCC-CCEEEEEcCCCceEEEEecCCCcce
Confidence 3556666666665555 3333 788777665443 33221 24444567775 6677776654433333 3445554
Q ss_pred EEEEe-CCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeC--CCCC-cEEEEEc-----CCCCCcceEEEeCCCCEEE
Q psy5751 79 KVIVS-KDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL--DGTD-REIFLKA-----ADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 79 ~~~~~-~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~--~g~~-~~~~~~~-----~~~~~p~~l~~d~~~~~Ly 148 (232)
...+. .... ....+.++|...++-+.-...+.++|+.... ++.. ...+... .......+++...++..+.
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 44444 2333 6788999998777766553334566776543 2222 1111111 1134556788877744444
Q ss_pred EEECCCCcEEE-EecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCCcceEE
Q psy5751 149 WVDADSKSLEC-MTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGERAPSIA 211 (232)
Q Consensus 149 ~~d~~~~~i~~-~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~~~~i~ 211 (232)
.+......+.. +..+|...+.+......+.-+++ ....+|.++. +.+.+ ...+..++.+.
T Consensus 182 ~~~~~~~~~~~~v~~dG~~~~~l~~~~~~~~v~a~~~~~~~~~~t~~--~~~~~-~~~~~~W~~v~ 244 (253)
T PF10647_consen 182 LGRSAGGPVVRLVSVDGGPSTPLPSVNLGVPVVAVAASPSTVYVTDD--GGVLQ-SRSGASWREVP 244 (253)
T ss_pred EeCCCCCceeEEEEccCCcccccCCCCCCcceEEeeCCCcEEEEECC--CcEEE-CCCCCcceEcc
Confidence 44444455666 88898877666333333333333 4667888774 44554 55566666543
No 189
>KOG0281|consensus
Probab=89.96 E-value=6.8 Score=32.07 Aligned_cols=177 Identities=11% Similarity=0.063 Sum_probs=99.1
Q ss_pred CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----CEEEEeCCCC
Q psy5751 12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ----PKVIVSKDLV 87 (232)
Q Consensus 12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~ 87 (232)
+++.++-..+. .|...+.+....-+++........++.+. ++ ..++.+....|.+.+++... .+++. ...+
T Consensus 247 ~rviisGSSDs-TvrvWDv~tge~l~tlihHceaVLhlrf~--ng-~mvtcSkDrsiaVWdm~sps~it~rrVLv-GHrA 321 (499)
T KOG0281|consen 247 ERVIVSGSSDS-TVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NG-YMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRA 321 (499)
T ss_pred ceEEEecCCCc-eEEEEeccCCchhhHHhhhcceeEEEEEe--CC-EEEEecCCceeEEEeccCchHHHHHHHHh-hhhh
Confidence 34666655555 77777877554323333344566677776 34 55688888899999998765 12222 3555
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR 167 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~ 167 (232)
..+-+-+| .+ +.++.++ ...|...++......-.+. ..-.|||--.-+++|.++-+....|...++..+..
T Consensus 322 aVNvVdfd--~k-yIVsASg--DRTikvW~~st~efvRtl~----gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~c 392 (499)
T KOG0281|consen 322 AVNVVDFD--DK-YIVSASG--DRTIKVWSTSTCEFVRTLN----GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 392 (499)
T ss_pred heeeeccc--cc-eEEEecC--CceEEEEeccceeeehhhh----cccccceehhccCeEEEecCCCceEEEEeccccHH
Confidence 55555555 34 3344443 3457776666443222222 23467776666789999888888888888875543
Q ss_pred EEEecC-CCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 168 RKVYSN-CTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 168 ~~~~~~-~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
-.++++ -.....+.+++.++ ++-...++|..-+..
T Consensus 393 LRvLeGHEeLvRciRFd~krI-VSGaYDGkikvWdl~ 428 (499)
T KOG0281|consen 393 LRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWDLQ 428 (499)
T ss_pred HHHHhchHHhhhheeecCcee-eeccccceEEEEecc
Confidence 222221 11122333444443 444445656555554
No 190
>KOG0646|consensus
Probab=89.78 E-value=11 Score=31.83 Aligned_cols=191 Identities=12% Similarity=0.033 Sum_probs=100.5
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-------
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD------- 76 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~------- 76 (232)
+++-++ .+.+.++..-.+ .||-..+..+..-.++......+..|.+.. ++..+++-...+.+.+..+...
T Consensus 86 al~s~n-~G~~l~ag~i~g-~lYlWelssG~LL~v~~aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a~~~~ 162 (476)
T KOG0646|consen 86 ALASSN-LGYFLLAGTISG-NLYLWELSSGILLNVLSAHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSADNDH 162 (476)
T ss_pred eeecCC-CceEEEeecccC-cEEEEEeccccHHHHHHhhccceeEEEEeC-CCcEEEecCCCccEEEEEEEeecccccCC
Confidence 555555 444444443344 688888886543222333446777777766 5667778888888877654221
Q ss_pred CCE--EEEeCCCCCceEEEEeC--CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 77 QPK--VIVSKDLVNPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 77 ~~~--~~~~~~~~~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
.++ -.++.+.-...++-+.. .+.+||-+..+ ..+...++.... .++....-..++++++||...++|.. .
T Consensus 163 ~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D---~t~k~wdlS~g~--LLlti~fp~si~av~lDpae~~~yiG-t 236 (476)
T KOG0646|consen 163 SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASED---RTIKLWDLSLGV--LLLTITFPSSIKAVALDPAERVVYIG-T 236 (476)
T ss_pred CccceeeeccCcceeEEEEecCCCccceEEEecCC---ceEEEEEeccce--eeEEEecCCcceeEEEcccccEEEec-C
Confidence 111 12222222233444443 13455555433 223444444332 22221112457899999997777665 5
Q ss_pred CCCcEEEEecCCCc-----------------eEEEecCC--CceEEEEE-ECCEEEEEeCCCCcEEEEeCC
Q psy5751 153 DSKSLECMTIRNRV-----------------RRKVYSNC--TYPFGLSI-TDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 153 ~~~~i~~~~~~g~~-----------------~~~~~~~~--~~p~gla~-~~~~ly~td~~~~~i~~~~~~ 203 (232)
..++|+...+.+.. ...+.... .....||+ .++.|..+-...+.|..-+..
T Consensus 237 ~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 237 EEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred CcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 57788887775322 11111111 23345666 466666665555666555544
No 191
>KOG1517|consensus
Probab=89.37 E-value=20 Score=34.04 Aligned_cols=165 Identities=10% Similarity=0.101 Sum_probs=97.6
Q ss_pred ccEEEEeec--CCeEEEEeCCCCeEEEEeCCCCCCEE-EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe--CCC
Q psy5751 46 PEGLTFDWV--NRVLYWTDSQMDTISMANLNDDQPKV-IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN--LDG 120 (232)
Q Consensus 46 p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~--~~g 120 (232)
-.|+.+||. .+.||++.. ...|...|.+-..+.. +-.+...-+..+.-+...|.++.+... .+.+..++ +..
T Consensus 1166 ~~~~v~dWqQ~~G~Ll~tGd-~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfa--DGsvRvyD~R~a~ 1242 (1387)
T KOG1517|consen 1166 GTGLVVDWQQQSGHLLVTGD-VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFA--DGSVRVYDRRMAP 1242 (1387)
T ss_pred CCCeeeehhhhCCeEEecCC-eeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeec--CCceEEeecccCC
Confidence 355888984 467886653 5567778887665432 222444567778877778888888765 34454444 443
Q ss_pred CCcEEEEEcCC--CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-CC----C-ceEEEEEECCEEEEEeC
Q psy5751 121 TDREIFLKAAD--LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NC----T-YPFGLSITDEKYYWTDW 192 (232)
Q Consensus 121 ~~~~~~~~~~~--~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~----~-~p~gla~~~~~ly~td~ 192 (232)
....+...... -....++.+-+.+-.=.++-+.+|.|...++++.....+.+ .. + .-..+.+++.--.++-.
T Consensus 1243 ~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsG 1322 (1387)
T KOG1517|consen 1243 PDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASG 1322 (1387)
T ss_pred ccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeec
Confidence 33233332221 11245667766422224666778999999999853333332 11 1 23456666443344444
Q ss_pred CCCcEEEEeCCCCCcceEEec
Q psy5751 193 KTNRIESANKEGERAPSIALD 213 (232)
Q Consensus 193 ~~~~i~~~~~~g~~~~~i~~~ 213 (232)
....|...+..|.++..+++.
T Consensus 1323 s~q~ikIy~~~G~~l~~~k~n 1343 (1387)
T KOG1517|consen 1323 SAQLIKIYSLSGEQLNIIKYN 1343 (1387)
T ss_pred CcceEEEEecChhhhcccccC
Confidence 448888889999888877754
No 192
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=88.79 E-value=2.6 Score=35.61 Aligned_cols=62 Identities=13% Similarity=0.196 Sum_probs=36.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe----CC---------------CCCccEEEEeecCCeEEEEe
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT----TN---------------IRSPEGLTFDWVNRVLYWTD 62 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~----~~---------------~~~p~gl~~d~~~~~ly~~d 62 (232)
+..|.....+..||++++.++ .|+.+++......+++. .+ ...|.=|.+.+.+++||||.
T Consensus 314 itDI~iSlDDrfLYvs~W~~G-dvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 314 ITDILISLDDRFLYVSNWLHG-DVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp ---EEE-TTS-EEEEEETTTT-EEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred eEeEEEccCCCEEEEEcccCC-cEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 456778888999999999999 99999998754333321 11 12456677888899999997
Q ss_pred CC
Q psy5751 63 SQ 64 (232)
Q Consensus 63 ~~ 64 (232)
+-
T Consensus 393 SL 394 (461)
T PF05694_consen 393 SL 394 (461)
T ss_dssp --
T ss_pred ec
Confidence 43
No 193
>KOG0319|consensus
Probab=88.52 E-value=18 Score=32.54 Aligned_cols=171 Identities=9% Similarity=0.044 Sum_probs=99.1
Q ss_pred EEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE--EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EE
Q psy5751 49 LTFDWVNRVLYWTDSQMDTISMANLNDDQPKV--IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EI 125 (232)
Q Consensus 49 l~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~ 125 (232)
++++..++.||.+.. ++|-..+........ .-.+.......+++.|.+..||.+...+ .+...++..... +.
T Consensus 25 ~~~s~nG~~L~t~~~--d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~---llrv~~L~tgk~irs 99 (775)
T KOG0319|consen 25 VAWSSNGQHLYTACG--DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQ---LLRVWSLPTGKLIRS 99 (775)
T ss_pred eeECCCCCEEEEecC--ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccc---eEEEEEcccchHhHh
Confidence 899998899986543 367777665554431 1114555667899999877777776432 245566654422 11
Q ss_pred EEEcCCCCCc-ceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE-ECCEEE---EEeCCCCcEEEE
Q psy5751 126 FLKAADLKLP-NSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI-TDEKYY---WTDWKTNRIESA 200 (232)
Q Consensus 126 ~~~~~~~~~p-~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~-~~~~ly---~td~~~~~i~~~ 200 (232)
... . ...| ..+++|+.+ .|.-+-...+++...++.+.....-..+.+.+..... .....+ .+-...+.+..-
T Consensus 100 wKa-~-He~Pvi~ma~~~~g-~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vw 176 (775)
T KOG0319|consen 100 WKA-I-HEAPVITMAFDPTG-TLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVW 176 (775)
T ss_pred Hhh-c-cCCCeEEEEEcCCC-ceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEE
Confidence 111 1 2344 578999985 5554444567888899998877666667666665544 444444 455555666666
Q ss_pred eCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 201 NKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 201 ~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
|....... +..-..+.+...++++.++
T Consensus 177 nl~~~~tc-l~~~~~H~S~vtsL~~~~d 203 (775)
T KOG0319|consen 177 NLNDKRTC-LHTMILHKSAVTSLAFSED 203 (775)
T ss_pred EcccCchH-HHHHHhhhhheeeeeeccC
Confidence 65522211 0000123445566665554
No 194
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=88.34 E-value=11 Score=29.70 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=45.0
Q ss_pred CCCCCccEEEEee--cCCeEEE-EeCCCCeEEEEeCCCC----CCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCC
Q psy5751 41 TNIRSPEGLTFDW--VNRVLYW-TDSQMDTISMANLNDD----QPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGP 111 (232)
Q Consensus 41 ~~~~~p~gl~~d~--~~~~ly~-~d~~~~~I~~~~~~g~----~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~ 111 (232)
.++..+.|+++.. ..+..|+ .....+.|..+.+-.. .....+. .-..+..||..|...|.||+++-. -
T Consensus 150 s~~s~~YGl~lyrs~ktgd~yvfV~~~qG~~~Qy~l~d~gnGkv~~k~vR~fk~~tQTEG~VaDdEtG~LYIaeEd---v 226 (364)
T COG4247 150 SSSSSAYGLALYRSPKTGDYYVFVNRRQGDIAQYKLIDQGNGKVGTKLVRQFKIPTQTEGMVADDETGFLYIAEED---V 226 (364)
T ss_pred cCcccceeeEEEecCCcCcEEEEEecCCCceeEEEEEecCCceEcceeeEeeecCCcccceeeccccceEEEeecc---c
Confidence 4567899999864 3333332 3333466766654221 1222222 123356799999999999999843 3
Q ss_pred cEEEEeCC
Q psy5751 112 KIEWSNLD 119 (232)
Q Consensus 112 ~I~~~~~~ 119 (232)
-||+...+
T Consensus 227 aiWK~~Ae 234 (364)
T COG4247 227 AIWKYEAE 234 (364)
T ss_pred eeeecccC
Confidence 48876654
No 195
>KOG0306|consensus
Probab=88.21 E-value=20 Score=32.57 Aligned_cols=151 Identities=15% Similarity=0.083 Sum_probs=89.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~ 80 (232)
.++.+.+ ++++..+...++ .+..+-++.-..-.-+ ...+ ...++.+.+ ..++.+|.+....+-..-+|=+.+ +.
T Consensus 512 L~v~~Sp-dgk~LaVsLLdn-TVkVyflDtlKFflsLYGHkL-PV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS 587 (888)
T KOG0306|consen 512 LCVSVSP-DGKLLAVSLLDN-TVKVYFLDTLKFFLSLYGHKL-PVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKS 587 (888)
T ss_pred EEEEEcC-CCcEEEEEeccC-eEEEEEecceeeeeeeccccc-ceeEEeccC-CcCeEEeccCCCceEEeccccchhhhh
Confidence 4677877 555555666666 6777777765432111 1222 345666666 455677887777777776665554 34
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
++. +......+.+-| ...+||+-.. .++|.+.+-+.-..-..+.. .......+++.+.++.+ ++-++...|...
T Consensus 588 ~fA-HdDSvm~V~F~P-~~~~FFt~gK--D~kvKqWDg~kFe~iq~L~~-H~~ev~cLav~~~G~~v-vs~shD~sIRlw 661 (888)
T KOG0306|consen 588 FFA-HDDSVMSVQFLP-KTHLFFTCGK--DGKVKQWDGEKFEEIQKLDG-HHSEVWCLAVSPNGSFV-VSSSHDKSIRLW 661 (888)
T ss_pred hhc-ccCceeEEEEcc-cceeEEEecC--cceEEeechhhhhhheeecc-chheeeeeEEcCCCCeE-EeccCCceeEee
Confidence 544 444567788888 7888888754 45676664332222111222 25667899999975555 555665656555
Q ss_pred ecC
Q psy5751 161 TIR 163 (232)
Q Consensus 161 ~~~ 163 (232)
...
T Consensus 662 E~t 664 (888)
T KOG0306|consen 662 ERT 664 (888)
T ss_pred ecc
Confidence 443
No 196
>smart00284 OLF Olfactomedin-like domains.
Probab=88.18 E-value=11 Score=29.63 Aligned_cols=148 Identities=15% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE--EEEeCC-----------CCCceEEEEeCCCCeEEEEEc-CCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK--VIVSKD-----------LVNPRGIVVHPYYRKLFWSDW-NRS 109 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~-----------~~~p~~iavd~~~~~ly~~d~-~~~ 109 (232)
..-.|-.|. ++.||+--..+..|.+.|+...... ..+... ...=-++|+|+ +| |++.-. .+.
T Consensus 74 ~~GtG~VVY--ngslYY~~~~s~~iiKydL~t~~v~~~~~Lp~a~y~~~~~Y~~~~~sdiDlAvDE-~G-LWvIYat~~~ 149 (255)
T smart00284 74 GQGTGVVVY--NGSLYFNKFNSHDICRFDLTTETYQKEPLLNGAGYNNRFPYAWGGFSDIDLAVDE-NG-LWVIYATEQN 149 (255)
T ss_pred cccccEEEE--CceEEEEecCCccEEEEECCCCcEEEEEecCccccccccccccCCCccEEEEEcC-Cc-eEEEEeccCC
Confidence 344566666 5899998888889999999887753 222211 11225899996 45 333221 123
Q ss_pred CCcEEEEeCCCCCcEEEEE--cCCCCCcc-eEEEeCCCCEEEEEECC---CCcEEE-EecCCCceEEEec----CCCceE
Q psy5751 110 GPKIEWSNLDGTDREIFLK--AADLKLPN-SLAVDFRTDELCWVDAD---SKSLEC-MTIRNRVRRKVYS----NCTYPF 178 (232)
Q Consensus 110 ~~~I~~~~~~g~~~~~~~~--~~~~~~p~-~l~~d~~~~~Ly~~d~~---~~~i~~-~~~~g~~~~~~~~----~~~~p~ 178 (232)
.+.|..+.++....++.-. .. ...++ +=+|= -.|.||.+++. ..+|.. .|..++....+.- .-..-.
T Consensus 150 ~g~ivvSkLnp~tL~ve~tW~T~-~~k~sa~naFm-vCGvLY~~~s~~~~~~~I~yayDt~t~~~~~~~i~f~n~y~~~s 227 (255)
T smart00284 150 AGKIVISKLNPATLTIENTWITT-YNKRSASNAFM-ICGILYVTRSLGSKGEKVFYAYDTNTGKEGHLDIPFENMYEYIS 227 (255)
T ss_pred CCCEEEEeeCcccceEEEEEEcC-CCcccccccEE-EeeEEEEEccCCCCCcEEEEEEECCCCccceeeeeeccccccce
Confidence 5778888888766555432 22 22222 11222 24899999863 334443 3444433222211 122222
Q ss_pred EEEE--ECCEEEEEeCCCCcEEE
Q psy5751 179 GLSI--TDEKYYWTDWKTNRIES 199 (232)
Q Consensus 179 gla~--~~~~ly~td~~~~~i~~ 199 (232)
.|.. .+..||. |.++.+..
T Consensus 228 ~l~YNP~d~~LY~--wdng~~l~ 248 (255)
T smart00284 228 MLDYNPNDRKLYA--WNNGHLVH 248 (255)
T ss_pred eceeCCCCCeEEE--EeCCeEEE
Confidence 3444 2678888 44554443
No 197
>KOG0270|consensus
Probab=87.84 E-value=15 Score=30.91 Aligned_cols=152 Identities=16% Similarity=0.127 Sum_probs=88.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC---------
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--------- 74 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--------- 74 (232)
+++++.....+..+-..++ .|...+++......++...-.....+...+....+..+.+..+++-..|..
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~-TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w 326 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADK-TVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW 326 (463)
T ss_pred HHHhccccceeEEecCCCc-eEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE
Confidence 3445554455555555556 788888886665555554556778888887666666666666666655544
Q ss_pred ---CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751 75 ---DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 75 ---g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
|..-++.. ....++.+.+...+|.+|+.|.+...--++... .. -...+||++....-.+..+.
T Consensus 327 k~~g~VEkv~w--~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~----------AH--d~~ISgl~~n~~~p~~l~t~ 392 (463)
T KOG0270|consen 327 KFDGEVEKVAW--DPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK----------AH--DDEISGLSVNIQTPGLLSTA 392 (463)
T ss_pred EeccceEEEEe--cCCCceeEEEecCCceEEeeecCCCCCceeEEE----------ec--cCCcceEEecCCCCcceeec
Confidence 22222333 233455555555678888888664322222221 11 22456777777666666666
Q ss_pred CCCCcEEEEecCCCceEEE
Q psy5751 152 ADSKSLECMTIRNRVRRKV 170 (232)
Q Consensus 152 ~~~~~i~~~~~~g~~~~~~ 170 (232)
+....|...++++...+.+
T Consensus 393 s~d~~Vklw~~~~~~~~~v 411 (463)
T KOG0270|consen 393 STDKVVKLWKFDVDSPKSV 411 (463)
T ss_pred cccceEEEEeecCCCCccc
Confidence 6666666666665554444
No 198
>KOG0645|consensus
Probab=87.74 E-value=12 Score=29.58 Aligned_cols=152 Identities=14% Similarity=0.070 Sum_probs=89.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE--EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--CCC-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV--ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--DDQ- 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~--~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--g~~- 77 (232)
.++++.+.++.|-.+.+... +......+...+.+ +...-+...+++....++.| -+-+....+.....+ +..
T Consensus 65 RsvAwsp~g~~La~aSFD~t--~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~L-ATCSRDKSVWiWe~deddEfe 141 (312)
T KOG0645|consen 65 RSVAWSPHGRYLASASFDAT--VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYL-ATCSRDKSVWIWEIDEDDEFE 141 (312)
T ss_pred eeeeecCCCcEEEEeeccce--EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEE-EEeeCCCeEEEEEecCCCcEE
Confidence 46788886665555554433 33333333333322 33345788889998855544 466666777777665 333
Q ss_pred CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEEECC-CC
Q psy5751 78 PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWVDAD-SK 155 (232)
Q Consensus 78 ~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~d~~-~~ 155 (232)
+..++.++..+...++-+|..+.|+-+... +.-++++... +..=+.+. ....-...-+++|++.+.+|.-++.. +-
T Consensus 142 c~aVL~~HtqDVK~V~WHPt~dlL~S~SYD-nTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv 219 (312)
T KOG0645|consen 142 CIAVLQEHTQDVKHVIWHPTEDLLFSCSYD-NTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTV 219 (312)
T ss_pred EEeeeccccccccEEEEcCCcceeEEeccC-CeEEEEeecC-CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcce
Confidence 556777888899999999977777766654 2334444433 33322222 12112245688999987788666443 34
Q ss_pred cEEE
Q psy5751 156 SLEC 159 (232)
Q Consensus 156 ~i~~ 159 (232)
+|++
T Consensus 220 ~Iw~ 223 (312)
T KOG0645|consen 220 SIWR 223 (312)
T ss_pred Eeee
Confidence 6777
No 199
>KOG0641|consensus
Probab=87.60 E-value=11 Score=28.96 Aligned_cols=74 Identities=12% Similarity=0.127 Sum_probs=54.0
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
.....+++|+ .++|..+......-..+|+.|......+.......+.+.+.|..-+|.-.... .+|...++.|.
T Consensus 232 savaav~vdp-sgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd---~~ikltdlqgd 305 (350)
T KOG0641|consen 232 SAVAAVAVDP-SGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYD---MKIKLTDLQGD 305 (350)
T ss_pred ceeEEEEECC-CcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEeccc---ceEEEeecccc
Confidence 4567799999 66677788777888889998887666665677788889999855555444433 45877777765
No 200
>KOG1407|consensus
Probab=87.11 E-value=13 Score=29.28 Aligned_cols=133 Identities=10% Similarity=0.128 Sum_probs=74.9
Q ss_pred CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE 124 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~ 124 (232)
...-++.. ..+.+||...+++.|..+......+..-+.-+..+..-|.++|.++ |++.... .+.+-..+++--.-.
T Consensus 149 e~ne~~w~-~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~Gr--yfA~GsA-DAlvSLWD~~ELiC~ 224 (313)
T KOG1407|consen 149 EVNEISWN-NSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGR--YFATGSA-DALVSLWDVDELICE 224 (313)
T ss_pred eeeeeeec-CCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCc--eEeeccc-cceeeccChhHhhhh
Confidence 33445555 4678999999999999888776555544443445667888999655 3443222 222333333322222
Q ss_pred EEEEcCCCCCc-ceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEEC
Q psy5751 125 IFLKAADLKLP-NSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITD 184 (232)
Q Consensus 125 ~~~~~~~~~~p-~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~ 184 (232)
-.+.. +.+| .-|+|+.+ +++.=+-+..+.|-.+....+.+-.-...-...+.+|++-
T Consensus 225 R~isR--ldwpVRTlSFS~d-g~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHP 282 (313)
T KOG1407|consen 225 RCISR--LDWPVRTLSFSHD-GRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHP 282 (313)
T ss_pred eeecc--ccCceEEEEeccC-cceeeccCccceEEeEecccCCeEEEeeccCCceeEEecC
Confidence 22222 5565 57888887 4444444556677777776554422222223335777763
No 201
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=86.99 E-value=15 Score=29.75 Aligned_cols=218 Identities=13% Similarity=0.030 Sum_probs=118.4
Q ss_pred EEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccE-EEEeecCCeEEEEeCC----CCeEEEEeCCC
Q psy5751 3 IGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEG-LTFDWVNRVLYWTDSQ----MDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~g-l~~d~~~~~ly~~d~~----~~~I~~~~~~g 75 (232)
++++.++ ....+.++.--.. ...+++..+......+. +.-.+-+| -++...++.||.++.. .+.|-++|...
T Consensus 8 H~~a~~p~~~~avafaRRPG~-~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGT-FALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCc-EEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 5677787 4445566655555 68888888665433333 22222222 2456668899988644 57899999984
Q ss_pred CC-CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC------Cc---------EEEE-eCCCCCcEEEEE--cCCCCCcc
Q psy5751 76 DQ-PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG------PK---------IEWS-NLDGTDREIFLK--AADLKLPN 136 (232)
Q Consensus 76 ~~-~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~------~~---------I~~~-~~~g~~~~~~~~--~~~~~~p~ 136 (232)
.. +.--+.+..-.|..+.+.|....|-+++.+-.. .+ +..+ ..+|...+.... ......-.
T Consensus 87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR 166 (305)
T PF07433_consen 87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR 166 (305)
T ss_pred CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence 43 333445677799999999966699998754211 01 1111 112221111111 00012345
Q ss_pred eEEEeCCCCEEEEEECCCCc-------EEEEecCCCceEEEe-c------CCCceEEEEEE--CCEEEEEeCCCCcEEEE
Q psy5751 137 SLAVDFRTDELCWVDADSKS-------LECMTIRNRVRRKVY-S------NCTYPFGLSIT--DEKYYWTDWKTNRIESA 200 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~~~~-------i~~~~~~g~~~~~~~-~------~~~~p~gla~~--~~~ly~td~~~~~i~~~ 200 (232)
.|+++.+ +.+++.....+. +...+.+ ...+.+. . .-...-+||+. .+.+.+|-...+++..+
T Consensus 167 HLa~~~~-G~V~~a~Q~qg~~~~~~PLva~~~~g-~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~ 244 (305)
T PF07433_consen 167 HLAVDGD-GTVAFAMQYQGDPGDAPPLVALHRRG-GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVW 244 (305)
T ss_pred eEEecCC-CcEEEEEecCCCCCccCCeEEEEcCC-CcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEE
Confidence 7788876 677666544321 2222222 2222221 1 11234477875 45788888899999999
Q ss_pred eCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751 201 NKE-GERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 201 ~~~-g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+.. |....... ...-.|||...+
T Consensus 245 d~~tg~~~~~~~-----l~D~cGva~~~~ 268 (305)
T PF07433_consen 245 DAATGRLLGSVP-----LPDACGVAPTDD 268 (305)
T ss_pred ECCCCCEeeccc-----cCceeeeeecCC
Confidence 665 44443333 233455555443
No 202
>KOG0639|consensus
Probab=86.97 E-value=19 Score=31.09 Aligned_cols=153 Identities=13% Similarity=0.145 Sum_probs=92.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-eeEEEe----CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVIT----TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~----~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
++++...+.++|-.- ++.|.+.++.+.. +..+.. ..-+..+...+-+.++.|.+..+ ...+...|+.....
T Consensus 424 AvtIS~~trhVyTgG---kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGe-astlsiWDLAapTp 499 (705)
T KOG0639|consen 424 AVTISNPTRHVYTGG---KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGE-ASTLSIWDLAAPTP 499 (705)
T ss_pred EEEecCCcceeEecC---CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccc-cceeeeeeccCCCc
Confidence 566666677777322 2256666666432 112211 12356777778887888876655 45677888876654
Q ss_pred EEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 79 KVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 79 ~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
++-.+ ........+++.|..+..|-+-. .+.|...++......--+..- -.....|.|..++-+| |+-.-.+.
T Consensus 500 rikaeltssapaCyALa~spDakvcFsccs---dGnI~vwDLhnq~~VrqfqGh-tDGascIdis~dGtkl-WTGGlDnt 574 (705)
T KOG0639|consen 500 RIKAELTSSAPACYALAISPDAKVCFSCCS---DGNIAVWDLHNQTLVRQFQGH-TDGASCIDISKDGTKL-WTGGLDNT 574 (705)
T ss_pred chhhhcCCcchhhhhhhcCCccceeeeecc---CCcEEEEEcccceeeecccCC-CCCceeEEecCCCcee-ecCCCccc
Confidence 43332 23345578999996666665443 344888887754433222221 3355678888874454 77677788
Q ss_pred EEEEecCCC
Q psy5751 157 LECMTIRNR 165 (232)
Q Consensus 157 i~~~~~~g~ 165 (232)
|.+.|++..
T Consensus 575 vRcWDlreg 583 (705)
T KOG0639|consen 575 VRCWDLREG 583 (705)
T ss_pred eeehhhhhh
Confidence 999988754
No 203
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=86.85 E-value=15 Score=29.71 Aligned_cols=199 Identities=9% Similarity=0.006 Sum_probs=114.8
Q ss_pred EEeCCCCEEEEEEcCC--C-CcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCC-----------------
Q psy5751 6 TVDCVEGQVYYSSVAD--K-SSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ----------------- 64 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~--~-~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~----------------- 64 (232)
.|++...+||.+.-.- . +.|.+.+.. +..+..-+...--.|..|.+.+.++.|.+++.+
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM 136 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTM 136 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhc
Confidence 4677777888774322 1 478888888 333322233333489999999877789888744
Q ss_pred CCeEEEEe-CCCCCCEE-EEe--CCCCCceEEEEeCCCCeEEEEEcCCC-----CCcEEEEeCCCCCcEEEEEc-C----
Q psy5751 65 MDTISMAN-LNDDQPKV-IVS--KDLVNPRGIVVHPYYRKLFWSDWNRS-----GPKIEWSNLDGTDREIFLKA-A---- 130 (232)
Q Consensus 65 ~~~I~~~~-~~g~~~~~-~~~--~~~~~p~~iavd~~~~~ly~~d~~~~-----~~~I~~~~~~g~~~~~~~~~-~---- 130 (232)
.-.+..+| .+|..... .+. ......+-|+++. +|.+.+....+. .+-+...+.++. .+.+-.. .
T Consensus 137 ~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~-~G~V~~a~Q~qg~~~~~~PLva~~~~g~~-~~~~~~p~~~~~~ 214 (305)
T PF07433_consen 137 QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDG-DGTVAFAMQYQGDPGDAPPLVALHRRGGA-LRLLPAPEEQWRR 214 (305)
T ss_pred CCceEEEecCCCceeeeeecCccccccceeeEEecC-CCcEEEEEecCCCCCccCCeEEEEcCCCc-ceeccCChHHHHh
Confidence 12344442 34433222 221 1233567899997 688877754322 222333333322 2221111 0
Q ss_pred CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 131 DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 131 ~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
.-.+--.|+++.+.+.+..+-...+++..++...+.. .-...+....|++...+. |+.-.+.+.+.+....+....
T Consensus 215 l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~-~~~~~l~D~cGva~~~~~-f~~ssG~G~~~~~~~~~~~~~ 290 (305)
T PF07433_consen 215 LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL-LGSVPLPDACGVAPTDDG-FLVSSGQGQLIRLSPDGPQPR 290 (305)
T ss_pred hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE-eeccccCceeeeeecCCc-eEEeCCCccEEEccCcccccc
Confidence 1245678999998778888888888888886664432 112245555678876444 444455677888777755443
No 204
>PHA02713 hypothetical protein; Provisional
Probab=86.29 E-value=23 Score=31.37 Aligned_cols=191 Identities=9% Similarity=0.038 Sum_probs=97.6
Q ss_pred cEEEEEcCCCceeEEEeCCCCCc---cEEEEeecCCeEEEEeCCC------CeEEEEeCCCCCCEEEEeCCCCCce---E
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSP---EGLTFDWVNRVLYWTDSQM------DTISMANLNDDQPKVIVSKDLVNPR---G 91 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p---~gl~~d~~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~~~~p~---~ 91 (232)
.+..++........+ . .+..+ .++++ .++.||+..... ..++++|+....-..+ ..+..|+ +
T Consensus 273 ~v~~yd~~~~~W~~l-~-~mp~~r~~~~~a~--l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~--~~m~~~R~~~~ 346 (557)
T PHA02713 273 CILVYNINTMEYSVI-S-TIPNHIINYASAI--VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVEL--PPMIKNRCRFS 346 (557)
T ss_pred CEEEEeCCCCeEEEC-C-CCCccccceEEEE--ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeC--CCCcchhhcee
Confidence 355666665443222 2 22222 23444 368899986432 3577777655432211 2333332 4
Q ss_pred EEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCcc-eEEEeCCCCEEEEEECC--------------
Q psy5751 92 IVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLPN-SLAVDFRTDELCWVDAD-------------- 153 (232)
Q Consensus 92 iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p~-~l~~d~~~~~Ly~~d~~-------------- 153 (232)
+++- +|.||+.....+ ...+++.++....=..+.. +..|. +.++-..+++||+.=..
T Consensus 347 ~~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~---mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~ 421 (557)
T PHA02713 347 LAVI--DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPD---MPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNS 421 (557)
T ss_pred EEEE--CCEEEEECCcCCCCCCceEEEEECCCCeEEECCC---CCcccccccEEEECCEEEEEeCCCccccccccccccc
Confidence 4444 799999864311 2346777766432222111 22221 11111224899987322
Q ss_pred ---------CCcEEEEecCCCceEEEecC--CCceEEEEEECCEEEEEeCCC------CcEEEEeCCC-CCcceEEeccC
Q psy5751 154 ---------SKSLECMTIRNRVRRKVYSN--CTYPFGLSITDEKYYWTDWKT------NRIESANKEG-ERAPSIALDMM 215 (232)
Q Consensus 154 ---------~~~i~~~~~~g~~~~~~~~~--~~~p~gla~~~~~ly~td~~~------~~i~~~~~~g-~~~~~i~~~~~ 215 (232)
...+++.++....-+.+... .....++++.+|+||+.-..+ ..+.++++.. ..++.+. +..
T Consensus 422 ~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~-~m~ 500 (557)
T PHA02713 422 IDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELIT-TTE 500 (557)
T ss_pred ccccccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEcc-ccC
Confidence 23577888776544433321 122347778899999985432 2467888887 5666442 232
Q ss_pred CcceeEEEEEE
Q psy5751 216 GTTYMYGIAAV 226 (232)
Q Consensus 216 ~~~~p~gi~~~ 226 (232)
.+..-.|+++.
T Consensus 501 ~~r~~~~~~~~ 511 (557)
T PHA02713 501 SRLSALHTILH 511 (557)
T ss_pred cccccceeEEE
Confidence 23333555554
No 205
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=86.00 E-value=18 Score=29.91 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=62.0
Q ss_pred CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCc-
Q psy5751 98 YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTY- 176 (232)
Q Consensus 98 ~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~- 176 (232)
++.+|.+... +.++..++...... .... .......+++ ++++|++. ..+.+.+++.+.++..--...+..
T Consensus 241 ~~~vy~~~~~---g~l~a~d~~tG~~~-W~~~--~~~~~~p~~~--~~~vyv~~-~~G~l~~~d~~tG~~~W~~~~~~~~ 311 (377)
T TIGR03300 241 GGQVYAVSYQ---GRVAALDLRSGRVL-WKRD--ASSYQGPAVD--DNRLYVTD-ADGVVVALDRRSGSELWKNDELKYR 311 (377)
T ss_pred CCEEEEEEcC---CEEEEEECCCCcEE-Eeec--cCCccCceEe--CCEEEEEC-CCCeEEEEECCCCcEEEccccccCC
Confidence 6889988754 45888887544322 1111 2233444454 47999885 568899999975543211211111
Q ss_pred -eEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751 177 -PFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIAL 212 (232)
Q Consensus 177 -p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~ 212 (232)
....++.+++||+.+. ++.|+.+++. |+....+..
T Consensus 312 ~~ssp~i~g~~l~~~~~-~G~l~~~d~~tG~~~~~~~~ 348 (377)
T TIGR03300 312 QLTAPAVVGGYLVVGDF-EGYLHWLSREDGSFVARLKT 348 (377)
T ss_pred ccccCEEECCEEEEEeC-CCEEEEEECCCCCEEEEEEc
Confidence 1122456888988875 4778888886 555554443
No 206
>KOG0284|consensus
Probab=85.26 E-value=21 Score=29.92 Aligned_cols=155 Identities=10% Similarity=0.045 Sum_probs=90.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
..++|.+ ++.-|++-..++ +|...+..-...+.++...-..+..++-.+..+.|+ +-...+.+-..|.....+...+
T Consensus 184 RdlafSp-nDskF~t~SdDg-~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLia-sgskDnlVKlWDprSg~cl~tl 260 (464)
T KOG0284|consen 184 RDLAFSP-NDSKFLTCSDDG-TIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIA-SGSKDNLVKLWDPRSGSCLATL 260 (464)
T ss_pred heeccCC-CCceeEEecCCC-eEEEEeccCCchhheeccCCCCcceeccCCccceeE-EccCCceeEeecCCCcchhhhh
Confidence 3678888 777788877777 888777664443445555456888888888655554 5555557777887766543333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
...-+...++.+.+...+| -+-.. ...+..+++. ...++......-.....++.+|-+..|+.+-...+.|.....
T Consensus 261 h~HKntVl~~~f~~n~N~L-lt~sk--D~~~kv~DiR-~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v 336 (464)
T KOG0284|consen 261 HGHKNTVLAVKFNPNGNWL-LTGSK--DQSCKVFDIR-TMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV 336 (464)
T ss_pred hhccceEEEEEEcCCCCee-EEccC--CceEEEEehh-HhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence 2344455677777744333 33221 2235555554 222221111112345667777877778777666666666555
Q ss_pred CC
Q psy5751 163 RN 164 (232)
Q Consensus 163 ~g 164 (232)
..
T Consensus 337 ~~ 338 (464)
T KOG0284|consen 337 GL 338 (464)
T ss_pred cc
Confidence 53
No 207
>KOG1407|consensus
Probab=85.11 E-value=17 Score=28.69 Aligned_cols=156 Identities=13% Similarity=0.116 Sum_probs=90.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee-EE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE-DV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~-~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.+++++...-+|--.. .++ .+..+.++..... +. ....-.....++.++....++.+-+....|.+.+.....+..
T Consensus 24 ~Sv~wn~~g~~lasgs-~dk-tv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~ 101 (313)
T KOG1407|consen 24 HSVAWNCDGTKLASGS-FDK-TVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTA 101 (313)
T ss_pred eEEEEcccCceeeecc-cCC-ceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEE
Confidence 4667776444443222 223 4555565543221 11 112224567788898888899888888889988877766655
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
.++... .-.-++-.|.++++-+.+. ...|..++.. ..+++.........+-++..- .+.|||...+.++|..+
T Consensus 102 ~i~~~~-eni~i~wsp~g~~~~~~~k---dD~it~id~r--~~~~~~~~~~~~e~ne~~w~~-~nd~Fflt~GlG~v~IL 174 (313)
T KOG1407|consen 102 RIETKG-ENINITWSPDGEYIAVGNK---DDRITFIDAR--TYKIVNEEQFKFEVNEISWNN-SNDLFFLTNGLGCVEIL 174 (313)
T ss_pred EeeccC-cceEEEEcCCCCEEEEecC---cccEEEEEec--ccceeehhcccceeeeeeecC-CCCEEEEecCCceEEEE
Confidence 554232 2234666665564444432 2234433332 223333332234556777774 47889998999999998
Q ss_pred ecCCCce
Q psy5751 161 TIRNRVR 167 (232)
Q Consensus 161 ~~~g~~~ 167 (232)
.+...++
T Consensus 175 sypsLkp 181 (313)
T KOG1407|consen 175 SYPSLKP 181 (313)
T ss_pred ecccccc
Confidence 8875443
No 208
>KOG2111|consensus
Probab=84.87 E-value=19 Score=29.12 Aligned_cols=154 Identities=9% Similarity=0.108 Sum_probs=90.7
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEE-EeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIV-VHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia-vd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
..+.++.++ .++|-+.-. ++|++++.....+....-+...+|+|++ ++|..+.-+.+--+...++|..+++....
T Consensus 95 ~~I~~V~l~--r~riVvvl~--~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~ 170 (346)
T KOG2111|consen 95 SEIKAVKLR--RDRIVVVLE--NKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTK 170 (346)
T ss_pred cceeeEEEc--CCeEEEEec--CeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcC
Confidence 456667776 355555544 4789888876554443334667798877 55555555555444457889999887766
Q ss_pred c--EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE-ecC-CCceEEEecCCCc--eEEEEEECCEEEEE-eCCCC
Q psy5751 123 R--EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM-TIR-NRVRRKVYSNCTY--PFGLSITDEKYYWT-DWKTN 195 (232)
Q Consensus 123 ~--~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~-~~~-g~~~~~~~~~~~~--p~gla~~~~~ly~t-d~~~~ 195 (232)
. ..++.. ....-..+++..+ |.+.=+-+..|.+.|+ +.. |+....+..+..+ ...+++-.+-.|.+ -+..+
T Consensus 171 ~~~p~~I~A-H~s~Iacv~Ln~~-Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg 248 (346)
T KOG2111|consen 171 PNAPSIINA-HDSDIACVALNLQ-GTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG 248 (346)
T ss_pred cCCceEEEc-ccCceeEEEEcCC-ccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence 5 233322 1455678888887 5555555666655554 443 4455555443333 45777754433333 44556
Q ss_pred cEEEEeCC
Q psy5751 196 RIESANKE 203 (232)
Q Consensus 196 ~i~~~~~~ 203 (232)
++-.|...
T Consensus 249 TlHiF~l~ 256 (346)
T KOG2111|consen 249 TLHIFSLR 256 (346)
T ss_pred eEEEEEee
Confidence 77777654
No 209
>KOG0640|consensus
Probab=84.25 E-value=21 Score=28.97 Aligned_cols=112 Identities=14% Similarity=0.174 Sum_probs=68.1
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
......|.+.+. ..|..+....+.|-..|..-...+..+. ......+.|.++|.+.+|.+... .+.+..++.+.
T Consensus 172 ~devn~l~FHPr-e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTd---Hp~~rlYdv~T 247 (430)
T KOG0640|consen 172 VDEVNDLDFHPR-ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTD---HPTLRLYDVNT 247 (430)
T ss_pred cCcccceeecch-hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecC---CCceeEEeccc
Confidence 356778888884 4466677777888888876544222111 23445678999997776666542 34455566554
Q ss_pred CCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 121 TDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 121 ~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
.. ..++.. .-...+.+-.++ ++.||++-+..+.|...|
T Consensus 248 ~Q--cfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwD 289 (430)
T KOG0640|consen 248 YQ--CFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWD 289 (430)
T ss_pred ee--EeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeec
Confidence 43 333221 011233444555 489999999999887754
No 210
>KOG0275|consensus
Probab=84.04 E-value=21 Score=28.99 Aligned_cols=131 Identities=9% Similarity=0.045 Sum_probs=69.7
Q ss_pred cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
+...+...++.|. +-+..+.+.+.+...+.+...+. ......+.+.+-|.+- .+.+++- .+.++.+++.|...
T Consensus 352 n~a~ft~dG~~ii-saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr---sntv~imn~qGQvV 427 (508)
T KOG0275|consen 352 NEATFTDDGHHII-SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNR---SNTVYIMNMQGQVV 427 (508)
T ss_pred cceEEcCCCCeEE-EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcC---CCeEEEEeccceEE
Confidence 3334444344443 33444566666655554433332 1112234555555442 3333332 35688888888877
Q ss_pred EEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceE-EEecCCCceEEEEE
Q psy5751 124 EIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLSI 182 (232)
Q Consensus 124 ~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~~~~~p~gla~ 182 (232)
+.+.+.. +....-..++++.+.++|-. ...+.++|+..-.++.+ ++--.-..+.|++-
T Consensus 428 rsfsSGkREgGdFi~~~lSpkGewiYci-gED~vlYCF~~~sG~LE~tl~VhEkdvIGl~H 487 (508)
T KOG0275|consen 428 RSFSSGKREGGDFINAILSPKGEWIYCI-GEDGVLYCFSVLSGKLERTLPVHEKDVIGLTH 487 (508)
T ss_pred eeeccCCccCCceEEEEecCCCcEEEEE-ccCcEEEEEEeecCceeeeeeccccccccccc
Confidence 7776553 12334566788988888755 55778899887655443 33222333445543
No 211
>PRK10115 protease 2; Provisional
Probab=83.30 E-value=36 Score=31.08 Aligned_cols=199 Identities=6% Similarity=0.022 Sum_probs=103.1
Q ss_pred EEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCc-cEEEEeecCCeEEEEeC-----CCCeEEEEeCC
Q psy5751 4 GITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSP-EGLTFDWVNRVLYWTDS-----QMDTISMANLN 74 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p-~gl~~d~~~~~ly~~d~-----~~~~I~~~~~~ 74 (232)
++.+.+..+.|.++-...+ ..|+..++.+... +...+... .+++....++.+|++-. ....+++.++.
T Consensus 131 ~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~---l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lg 207 (686)
T PRK10115 131 GMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW---YPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIG 207 (686)
T ss_pred EEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC---CCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECC
Confidence 4566666666655533222 2577777764431 11111111 34666555667777632 22578889988
Q ss_pred CCC--CEEEEeCCCCCce-EEEEeCCCCeEEEEEcCCCCCcEEEEeCC--CCCcEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751 75 DDQ--PKVIVSKDLVNPR-GIVVHPYYRKLFWSDWNRSGPKIEWSNLD--GTDREIFLKAADLKLPNSLAVDFRTDELCW 149 (232)
Q Consensus 75 g~~--~~~~~~~~~~~p~-~iavd~~~~~ly~~d~~~~~~~I~~~~~~--g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~ 149 (232)
... .+.++.+...... +.......+.+++.........++....+ ......++... ...- ..+...++.+|+
T Consensus 208 t~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~ly~ 284 (686)
T PRK10115 208 TPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRR-KDHE--YSLDHYQHRFYL 284 (686)
T ss_pred CChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECC-CCCE--EEEEeCCCEEEE
Confidence 773 4455553222222 22333345666655444344566666532 12223333322 2222 223333477777
Q ss_pred EECC---CCcEEEEecCCC-ceEEEecC-C-CceEEEEEECCEEEEEeC--CCCcEEEEeCCCCCcc
Q psy5751 150 VDAD---SKSLECMTIRNR-VRRKVYSN-C-TYPFGLSITDEKYYWTDW--KTNRIESANKEGERAP 208 (232)
Q Consensus 150 ~d~~---~~~i~~~~~~g~-~~~~~~~~-~-~~p~gla~~~~~ly~td~--~~~~i~~~~~~g~~~~ 208 (232)
.... ..++.++++... +-+.+... . ....+++++.+.|+++.. +..++..++..+....
T Consensus 285 ~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~ 351 (686)
T PRK10115 285 RSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVI 351 (686)
T ss_pred EEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCceE
Confidence 7543 457888887732 22344332 2 345678888888888754 3346677776554433
No 212
>KOG0307|consensus
Probab=83.27 E-value=33 Score=32.51 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=90.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC---CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI---RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~---~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
..+++|+...+.|..+..+++ .|+..+++.....-.. ... ..+..|+-.-....|+-+-..++++.+.|+..+..
T Consensus 119 V~gLDfN~~q~nlLASGa~~g-eI~iWDlnn~~tP~~~-~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p 196 (1049)
T KOG0307|consen 119 VLGLDFNPFQGNLLASGADDG-EILIWDLNKPETPFTP-GSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP 196 (1049)
T ss_pred eeeeeccccCCceeeccCCCC-cEEEeccCCcCCCCCC-CCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc
Confidence 458999997776766666666 9999999864321111 122 23333333333346666666678899999888754
Q ss_pred EEEEeCC--CCCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 79 KVIVSKD--LVNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 79 ~~~~~~~--~~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
..-+... .-+..+++-+|..-.-.++..+. ....|...++.-.. .+++ ..+-...-+|..-+.+.+|..+-..
T Consensus 197 ii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~--~~H~~GilslsWc~~D~~lllSsgk 274 (1049)
T KOG0307|consen 197 IIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKIL--EGHQRGILSLSWCPQDPRLLLSSGK 274 (1049)
T ss_pred ccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhh--cccccceeeeccCCCCchhhhcccC
Confidence 3333311 12345778787654444433222 24455555544332 2222 1112344455555555577777777
Q ss_pred CCcEEEEecCCCc
Q psy5751 154 SKSLECMTIRNRV 166 (232)
Q Consensus 154 ~~~i~~~~~~g~~ 166 (232)
.++|.+.+.+.++
T Consensus 275 D~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 275 DNRIICWNPNTGE 287 (1049)
T ss_pred CCCeeEecCCCce
Confidence 8889998887643
No 213
>KOG2110|consensus
Probab=83.18 E-value=25 Score=29.07 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=79.2
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEE-EeecCCeEEE---EeCCCCeEEEEeCCCCCCEEEEeCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLT-FDWVNRVLYW---TDSQMDTISMANLNDDQPKVIVSKDL 86 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~-~d~~~~~ly~---~d~~~~~I~~~~~~g~~~~~~~~~~~ 86 (232)
.++|.+.-.. .|+..++..-..-..+..-..+|.|+. +.....+=|. .+...+.|...|.........++-+-
T Consensus 97 r~RLvV~Lee---~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~ 173 (391)
T KOG2110|consen 97 RKRLVVCLEE---SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHK 173 (391)
T ss_pred cceEEEEEcc---cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecC
Confidence 4555553322 577777765332111222223555443 3333333333 34557899999988877776666555
Q ss_pred CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
.....+|+++ +|.|.-|.+.+ ...|.+.......+.--+-- .....-..|+|+++...|-.+ +.+..|..+.+
T Consensus 174 ~~lAalafs~-~G~llATASeK-GTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~s-S~TeTVHiFKL 247 (391)
T KOG2110|consen 174 GPLAALAFSP-DGTLLATASEK-GTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAAS-SNTETVHIFKL 247 (391)
T ss_pred CceeEEEECC-CCCEEEEeccC-ceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEe-cCCCeEEEEEe
Confidence 6678899998 78887777653 23344444432221111111 101234678999987766554 44444544444
No 214
>KOG0973|consensus
Probab=83.03 E-value=42 Score=31.56 Aligned_cols=148 Identities=10% Similarity=-0.008 Sum_probs=82.2
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
.-.....++.++ .+.+.++-...+.|...+........++..+...+.|+++||.++ .+-+... ...|...+...-
T Consensus 128 H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gk-y~ASqsd--Drtikvwrt~dw 203 (942)
T KOG0973|consen 128 HDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGK-YFASQSD--DRTLKVWRTSDW 203 (942)
T ss_pred CCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecccccccceEECCccC-eeeeecC--CceEEEEEcccc
Confidence 345667777777 566777777788999999888776677777888899999999655 3333322 233443333322
Q ss_pred CcEEEEEcC-----CCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCC
Q psy5751 122 DREIFLKAA-----DLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWK 193 (232)
Q Consensus 122 ~~~~~~~~~-----~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~ 193 (232)
..+..+... .-....-+..+|++..|-.++..++ .+..++-++-+...-+-+-..|.-++.++-+||=....
T Consensus 204 ~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ 283 (942)
T KOG0973|consen 204 GIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNK 283 (942)
T ss_pred eeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccc
Confidence 222222222 0122345667777666655544332 33333333333222222333355555555555554443
No 215
>KOG0649|consensus
Probab=82.71 E-value=21 Score=27.93 Aligned_cols=77 Identities=6% Similarity=0.022 Sum_probs=55.8
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
.+..++.+-+|+..+.|+++. +.+.|+.+|++....+..+..+......++....++.++--. +.+.+...+....
T Consensus 113 evPeINam~ldP~enSi~~Ag-GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~---EDGtvRvWd~kt~ 188 (325)
T KOG0649|consen 113 EVPEINAMWLDPSENSILFAG-GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGA---EDGTVRVWDTKTQ 188 (325)
T ss_pred cCCccceeEeccCCCcEEEec-CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecC---CCccEEEEecccc
Confidence 457889999999999999887 668999999988877777776767777787766677775433 2344555555544
Q ss_pred C
Q psy5751 122 D 122 (232)
Q Consensus 122 ~ 122 (232)
.
T Consensus 189 k 189 (325)
T KOG0649|consen 189 K 189 (325)
T ss_pred c
Confidence 3
No 216
>KOG0772|consensus
Probab=81.85 E-value=34 Score=29.75 Aligned_cols=158 Identities=9% Similarity=0.018 Sum_probs=95.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
..++++|+..-+++-..+. . .|.-++++|-. .+.+.......+..+.+...++.|.+.. +.-.+.++|.+|.
T Consensus 170 Vsal~~Dp~GaR~~sGs~D-y-~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs-g~aqakl~DRdG~ 246 (641)
T KOG0772|consen 170 VSALAVDPSGARFVSGSLD-Y-TVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS-GSAQAKLLDRDGF 246 (641)
T ss_pred EEEeeecCCCceeeecccc-c-eEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe-cCcceeEEccCCc
Confidence 4588999977776654444 3 57778888743 2233334556788899988777776554 4457778899987
Q ss_pred CCEEEEeC------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC---CCCCcceEEEe
Q psy5751 77 QPKVIVSK------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA---DLKLPNSLAVD 141 (232)
Q Consensus 77 ~~~~~~~~------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~---~~~~p~~l~~d 141 (232)
.....+.. +......-+-+|.+...|.+-..-+..+||-++-.-...+++.... ---.|...+++
T Consensus 247 ~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~n 326 (641)
T KOG0772|consen 247 EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWN 326 (641)
T ss_pred eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecC
Confidence 75444431 2222333446777777777765534556665554444555555432 12346677888
Q ss_pred CCCCEEEEEECCCCcEEEEecC
Q psy5751 142 FRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 142 ~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
++ +.++-+--..+.|...+..
T Consensus 327 rd-g~~iAagc~DGSIQ~W~~~ 347 (641)
T KOG0772|consen 327 RD-GKLIAAGCLDGSIQIWDKG 347 (641)
T ss_pred CC-cchhhhcccCCceeeeecC
Confidence 87 4543333345666666654
No 217
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []. Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding
Probab=81.83 E-value=23 Score=27.80 Aligned_cols=178 Identities=14% Similarity=0.033 Sum_probs=95.7
Q ss_pred CCCCEEEEEEcCCCCcEEEEEc------CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-E-
Q psy5751 9 CVEGQVYYSSVADKSSIKRAHL------DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-V- 80 (232)
Q Consensus 9 ~~~~~ly~~d~~~~~~i~~~~~------~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~- 80 (232)
...+++||++...+..|..+.. .+...+....+....-.|-++. ++.||+--..+..|.+.|+...... .
T Consensus 28 ~~~~~iy~~~~~~~~~v~ey~~~~~f~~~~~~~~~~~Lp~~~~GtG~vVY--ngslYY~~~~s~~IvkydL~t~~v~~~~ 105 (250)
T PF02191_consen 28 SDSEKIYVTSGFSGNTVYEYRNYEDFLRNGRSSRTYKLPYPWQGTGHVVY--NGSLYYNKYNSRNIVKYDLTTRSVVARR 105 (250)
T ss_pred CCCCCEEEECccCCCEEEEEcCHhHHhhcCCCceEEEEeceeccCCeEEE--CCcEEEEecCCceEEEEECcCCcEEEEE
Confidence 3467888888765534544331 2222333333333455666676 6889999999999999999987754 2
Q ss_pred EEeCC-----------CCCceEEEEeCCCCeEEEEEcC-CCCCcEEEEeCCCCCcEEEEE--cCCCCCcc-eEEEeCCCC
Q psy5751 81 IVSKD-----------LVNPRGIVVHPYYRKLFWSDWN-RSGPKIEWSNLDGTDREIFLK--AADLKLPN-SLAVDFRTD 145 (232)
Q Consensus 81 ~~~~~-----------~~~p~~iavd~~~~~ly~~d~~-~~~~~I~~~~~~g~~~~~~~~--~~~~~~p~-~l~~d~~~~ 145 (232)
.+... ...=.++|+|+ +| |++.-.. ...+.|....+|.....+.-. .. +..+. +=+|=- .|
T Consensus 106 ~L~~A~~~n~~~y~~~~~t~iD~AvDE-~G-LWvIYat~~~~g~ivvskld~~tL~v~~tw~T~-~~k~~~~naFmv-CG 181 (250)
T PF02191_consen 106 ELPGAGYNNRFPYYWSGYTDIDFAVDE-NG-LWVIYATEDNNGNIVVSKLDPETLSVEQTWNTS-YPKRSAGNAFMV-CG 181 (250)
T ss_pred ECCccccccccceecCCCceEEEEEcC-CC-EEEEEecCCCCCcEEEEeeCcccCceEEEEEec-cCchhhcceeeE-ee
Confidence 12111 11115899995 55 3333221 124568877777665444322 22 22222 112222 48
Q ss_pred EEEEEECCC---CcEEE-EecCCCceEEEec----CCCceEEEEEE--CCEEEEEeC
Q psy5751 146 ELCWVDADS---KSLEC-MTIRNRVRRKVYS----NCTYPFGLSIT--DEKYYWTDW 192 (232)
Q Consensus 146 ~Ly~~d~~~---~~i~~-~~~~g~~~~~~~~----~~~~p~gla~~--~~~ly~td~ 192 (232)
.||.+++.. .+|.. +|...++...+.- .......|... +..||.=|-
T Consensus 182 vLY~~~s~~~~~~~I~yafDt~t~~~~~~~i~f~~~~~~~~~l~YNP~dk~LY~wd~ 238 (250)
T PF02191_consen 182 VLYATDSYDTRDTEIFYAFDTYTGKEEDVSIPFPNPYGNISMLSYNPRDKKLYAWDN 238 (250)
T ss_pred EEEEEEECCCCCcEEEEEEECCCCceeceeeeeccccCceEeeeECCCCCeEEEEEC
Confidence 999998865 34433 3444333322211 22233344553 778888443
No 218
>KOG2139|consensus
Probab=81.52 E-value=29 Score=28.75 Aligned_cols=189 Identities=13% Similarity=0.032 Sum_probs=109.8
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEE-cCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAH-LDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~-~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.+++-...+..+|++.... ...|.. .-+.....++. ++-.....|...+.+..|--+......|...+.+......+
T Consensus 155 elavgCr~gIciW~~s~tl-n~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL 233 (445)
T KOG2139|consen 155 ELAVGCRAGICIWSDSRTL-NANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPL 233 (445)
T ss_pred eeeeeecceeEEEEcCccc-ccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccc
Confidence 3556667778888876533 222211 11222223333 23344566666665555555556677899999998876666
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEE-EEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIE-WSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~-~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
....+....-+--+|.+..||-+.... ..+++ ....-...+.++.+. ...+-..++.+.+|.++-++...++++
T Consensus 234 ~~~glgg~slLkwSPdgd~lfaAt~da-vfrlw~e~q~wt~erw~lgsg----rvqtacWspcGsfLLf~~sgsp~lysl 308 (445)
T KOG2139|consen 234 IPKGLGGFSLLKWSPDGDVLFAATCDA-VFRLWQENQSWTKERWILGSG----RVQTACWSPCGSFLLFACSGSPRLYSL 308 (445)
T ss_pred cccCCCceeeEEEcCCCCEEEEecccc-eeeeehhcccceecceeccCC----ceeeeeecCCCCEEEEEEcCCceEEEE
Confidence 544555555667888777777766442 22333 122222233333222 455667889889999999999999999
Q ss_pred ecCCCc----------eEEE-ec--------C----CCceEEEEEE--CCEEEEEeCCCCcEE
Q psy5751 161 TIRNRV----------RRKV-YS--------N----CTYPFGLSIT--DEKYYWTDWKTNRIE 198 (232)
Q Consensus 161 ~~~g~~----------~~~~-~~--------~----~~~p~gla~~--~~~ly~td~~~~~i~ 198 (232)
.+++.. +..+ ++ . ...+..+|+| +++|-++--+..+|.
T Consensus 309 ~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~ 371 (445)
T KOG2139|consen 309 TFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVL 371 (445)
T ss_pred eecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhh
Confidence 887531 2112 11 1 3446788886 677777755555443
No 219
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=80.57 E-value=43 Score=30.13 Aligned_cols=205 Identities=10% Similarity=0.084 Sum_probs=104.9
Q ss_pred EEEEeCCCCEEEEE-EcCCCCcEEEEEcCCCceeEEEeCCCC-CccEEEEeecCCeEEEEeCCC----CeEEEEeCCC--
Q psy5751 4 GITVDCVEGQVYYS-SVADKSSIKRAHLDGKNVEDVITTNIR-SPEGLTFDWVNRVLYWTDSQM----DTISMANLND-- 75 (232)
Q Consensus 4 ~i~~d~~~~~ly~~-d~~~~~~i~~~~~~g~~~~~~~~~~~~-~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~g-- 75 (232)
+++.++..+.|-|+ |.... +.+.+.+......+.+...+. ...+++....++.+|++-... .++++..+++
T Consensus 133 ~~~~s~D~~~la~s~D~~G~-e~y~lr~kdL~tg~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~ 211 (682)
T COG1770 133 AASISPDHNLLAYSVDVLGD-EQYTLRFKDLATGEELPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPG 211 (682)
T ss_pred eeeeCCCCceEEEEEecccc-cEEEEEEEecccccccchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCC
Confidence 45666766666555 44444 444443332222223333333 356677777788888886442 4788888887
Q ss_pred CCCEEEEeCCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC--CCEEEEEEC
Q psy5751 76 DQPKVIVSKDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR--TDELCWVDA 152 (232)
Q Consensus 76 ~~~~~~~~~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~--~~~Ly~~d~ 152 (232)
..-+.+.++... .-.++--...+..|+..-.+.....++..+.+-...+..+- ...++|+..+.+ ++..|.-..
T Consensus 212 ~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv---~pr~~g~eY~~eh~~d~f~i~sN 288 (682)
T COG1770 212 SSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVV---LPRENGVEYSVEHGGDRFYILSN 288 (682)
T ss_pred CcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEE---EEcCCCcEEeeeecCcEEEEEec
Confidence 444555553321 11233333335667666555556677777766544322211 124566655443 334444332
Q ss_pred C---CCcEEEEecCC---CceEEE-ecCCCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceEEe
Q psy5751 153 D---SKSLECMTIRN---RVRRKV-YSNCTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSIAL 212 (232)
Q Consensus 153 ~---~~~i~~~~~~g---~~~~~~-~~~~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~ 212 (232)
. +-+|.+....- ..+..+ ........++.++.++|.+-+-.. .+|...+........|.+
T Consensus 289 ~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~i~f 357 (682)
T COG1770 289 ADGKNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERGIAF 357 (682)
T ss_pred CCCcceEEEEccCCCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCceeeEEe
Confidence 2 33677766611 122222 223444567777888888876544 345544443333333444
No 220
>KOG0918|consensus
Probab=80.32 E-value=31 Score=29.04 Aligned_cols=102 Identities=12% Similarity=0.176 Sum_probs=54.1
Q ss_pred cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcE
Q psy5751 47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDRE 124 (232)
Q Consensus 47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~ 124 (232)
..+-+.-..++||++.--.+-|.++|+.......+ ++++|.-..-.....+....-++ ...+
T Consensus 315 TDilISmDDRFLYvs~WLHGDirQYdIsDP~n~kL----------------tgQi~lGG~i~~~s~vkvl~~e~~~~~~e 378 (476)
T KOG0918|consen 315 TDILISLDDRFLYVSNWLHGDIRQYDISDPKNPKL----------------TGQIFLGGSIQKGSPVKVLEEEGLKKQPE 378 (476)
T ss_pred heeEEeecCcEEEEEeeeecceeeeccCCCCCcce----------------EEEEEECcEeecCCceEEeccccccCCCc
Confidence 44445555789998888878888888755432222 23333321111111122111111 1111
Q ss_pred EE-E-EcCCCCCcceEEEeCCCCEEEEEECC---------------CCcEEEEecCC
Q psy5751 125 IF-L-KAADLKLPNSLAVDFRTDELCWVDAD---------------SKSLECMTIRN 164 (232)
Q Consensus 125 ~~-~-~~~~~~~p~~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g 164 (232)
.+ + .......|.=|-++.++.|||+|.+- .+++.+++.|.
T Consensus 379 a~~vKGrkl~GGPQMlQLSLDGKRLYVt~SLys~WD~QFYPE~v~~G~~miqidvdt 435 (476)
T KOG0918|consen 379 ALYVKGRKLRGGPQMLQLSLDGKRLYVTNSLYSAWDRQFYPELVSKGSHMIQIDVDT 435 (476)
T ss_pred cceecCccccCCceeEEeccCCcEEEEEchhhhhhHhhhCHHHHhcCceEEEEeeec
Confidence 11 1 11113568888888889999999652 45777777764
No 221
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=79.53 E-value=43 Score=29.50 Aligned_cols=67 Identities=9% Similarity=0.018 Sum_probs=41.8
Q ss_pred eEEEeCCCCEEEEEECC---------------CCcEEEEecCCCceEEEecCC----------CceEEEEE-ECCE---E
Q psy5751 137 SLAVDFRTDELCWVDAD---------------SKSLECMTIRNRVRRKVYSNC----------TYPFGLSI-TDEK---Y 187 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g~~~~~~~~~~----------~~p~gla~-~~~~---l 187 (232)
.+++|+..+.|||.-.+ ...|..+|++.++.+--.+.. ..|.=+.+ .+++ +
T Consensus 238 ~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~ 317 (527)
T TIGR03075 238 TGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKL 317 (527)
T ss_pred ceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEE
Confidence 46999999999998532 347888888877665433321 22222223 1333 6
Q ss_pred EEEeCCCCcEEEEeCC
Q psy5751 188 YWTDWKTNRIESANKE 203 (232)
Q Consensus 188 y~td~~~~~i~~~~~~ 203 (232)
+..-.+++.++.+++.
T Consensus 318 v~~~~K~G~~~vlDr~ 333 (527)
T TIGR03075 318 LAHADRNGFFYVLDRT 333 (527)
T ss_pred EEEeCCCceEEEEECC
Confidence 6666667777777776
No 222
>KOG0650|consensus
Probab=78.42 E-value=29 Score=30.77 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=58.1
Q ss_pred CeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCC
Q psy5751 66 DTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 66 ~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~ 144 (232)
.++.+.++.-...+.-+...-..|....++|..-+||++... .|..+++..... ..+... ..+-+.+++++.+
T Consensus 546 ~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~----~vRiYdL~kqelvKkL~tg--~kwiS~msihp~G 619 (733)
T KOG0650|consen 546 KSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR----SVRIYDLSKQELVKKLLTG--SKWISSMSIHPNG 619 (733)
T ss_pred ceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc----ceEEEehhHHHHHHHHhcC--CeeeeeeeecCCC
Confidence 444444444333332232344577889999999999999854 255666654322 222222 5678899999987
Q ss_pred CEEEEEECCCCcEEEEecCC
Q psy5751 145 DELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g 164 (232)
+.|... +..+++-.++++-
T Consensus 620 Dnli~g-s~d~k~~WfDldl 638 (733)
T KOG0650|consen 620 DNLILG-SYDKKMCWFDLDL 638 (733)
T ss_pred CeEEEe-cCCCeeEEEEccc
Confidence 888665 5567777777773
No 223
>KOG0273|consensus
Probab=78.36 E-value=43 Score=28.75 Aligned_cols=67 Identities=13% Similarity=0.129 Sum_probs=47.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN 72 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~ 72 (232)
++++++.++.=|.+...+. .|++..+.+......+...-+.+.+|.+++ .+.|.-+-+....+...+
T Consensus 321 ~lDVdW~~~~~F~ts~td~-~i~V~kv~~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs 387 (524)
T KOG0273|consen 321 ALDVDWQSNDEFATSSTDG-CIHVCKVGEDRPVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWS 387 (524)
T ss_pred ccceEEecCceEeecCCCc-eEEEEEecCCCcceeeecccCceEEEEECC-CCceEEEecCCCeeEeee
Confidence 5778888888888887777 899998888766555555557889999998 455555555544444444
No 224
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=78.13 E-value=2.5 Score=22.39 Aligned_cols=20 Identities=15% Similarity=0.322 Sum_probs=16.4
Q ss_pred CCceEEEEeCCCCeEEEEEcC
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWN 107 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~ 107 (232)
..+.+|++|+ .|.+|++-..
T Consensus 13 ~~~~~IavD~-~GNiYv~G~T 32 (38)
T PF06739_consen 13 DYGNGIAVDS-NGNIYVTGYT 32 (38)
T ss_pred eeEEEEEECC-CCCEEEEEee
Confidence 4689999997 7889998653
No 225
>KOG0293|consensus
Probab=78.05 E-value=41 Score=28.42 Aligned_cols=115 Identities=11% Similarity=0.050 Sum_probs=73.0
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC-CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD-LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
....-|...|..+.|. +......+...|.+.+......... ...+...+-.| +|.=+++... ...|...++||..
T Consensus 270 ~~V~yi~wSPDdryLl-aCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~--dr~i~~wdlDgn~ 345 (519)
T KOG0293|consen 270 QPVSYIMWSPDDRYLL-ACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSP--DRTIIMWDLDGNI 345 (519)
T ss_pred CceEEEEECCCCCeEE-ecCchHheeeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCC--CCcEEEecCCcch
Confidence 4455566677666554 4444456777788777665555433 34666777777 5555666543 4678999999886
Q ss_pred cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 123 ~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g 164 (232)
....-... .+...++++.+++..++.... ..+|.-++...
T Consensus 346 ~~~W~gvr-~~~v~dlait~Dgk~vl~v~~-d~~i~l~~~e~ 385 (519)
T KOG0293|consen 346 LGNWEGVR-DPKVHDLAITYDGKYVLLVTV-DKKIRLYNREA 385 (519)
T ss_pred hhcccccc-cceeEEEEEcCCCcEEEEEec-ccceeeechhh
Confidence 54443322 345679999999888887753 44555555543
No 226
>KOG0284|consensus
Probab=78.03 E-value=41 Score=28.33 Aligned_cols=123 Identities=10% Similarity=0.056 Sum_probs=70.8
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~ 116 (232)
.+....-..+.++.....+..+ ++....+.|-..+..-...+.+-.......+++|+.| ++..|.+-.. .+.|...
T Consensus 132 tilQaHDs~Vr~m~ws~~g~wm-iSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSp-nDskF~t~Sd--Dg~ikiW 207 (464)
T KOG0284|consen 132 TILQAHDSPVRTMKWSHNGTWM-ISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSD--DGTIKIW 207 (464)
T ss_pred HHhhhhcccceeEEEccCCCEE-EEcCCCceEEecccchhhhHHhhHhhhhhhheeccCC-CCceeEEecC--CCeEEEE
Confidence 3333333566777766644433 3433445666666666555544443446788999998 8888888765 3445544
Q ss_pred eCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 117 ~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
+..-...+.++... ..-+..+..+|..+.|. +-+..+-|.-.|+..+
T Consensus 208 df~~~kee~vL~GH-gwdVksvdWHP~kgLia-sgskDnlVKlWDprSg 254 (464)
T KOG0284|consen 208 DFRMPKEERVLRGH-GWDVKSVDWHPTKGLIA-SGSKDNLVKLWDPRSG 254 (464)
T ss_pred eccCCchhheeccC-CCCcceeccCCccceeE-EccCCceeEeecCCCc
Confidence 43322223333332 56678888888755554 4345556666666643
No 227
>KOG3881|consensus
Probab=76.70 E-value=43 Score=27.95 Aligned_cols=109 Identities=6% Similarity=-0.081 Sum_probs=0.0
Q ss_pred CccEEEEeecC--CeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 45 SPEGLTFDWVN--RVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 45 ~p~gl~~d~~~--~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
++.++.+-+ + ..-|.+-+..+.+..+|.. .+++.+.. ..-.....++..|....+|+++ ..+++..+++.+
T Consensus 204 W~tdi~Fl~-g~~~~~fat~T~~hqvR~YDt~-~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn---~~g~l~~FD~r~ 278 (412)
T KOG3881|consen 204 WITDIRFLE-GSPNYKFATITRYHQVRLYDTR-HQRRPVAQFDFLENPISSTGLTPSGNFIYTGN---TKGQLAKFDLRG 278 (412)
T ss_pred eeccceecC-CCCCceEEEEecceeEEEecCc-ccCcceeEeccccCcceeeeecCCCcEEEEec---ccchhheecccC
Q ss_pred CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
.......-...-..+.+|..++ ..=|.+..+..+..|+
T Consensus 279 ~kl~g~~~kg~tGsirsih~hp--~~~~las~GLDRyvRI 316 (412)
T KOG3881|consen 279 GKLLGCGLKGITGSIRSIHCHP--THPVLASCGLDRYVRI 316 (412)
T ss_pred ceeeccccCCccCCcceEEEcC--CCceEEeeccceeEEE
No 228
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=76.02 E-value=55 Score=28.85 Aligned_cols=84 Identities=11% Similarity=-0.022 Sum_probs=46.1
Q ss_pred ceEEEeCCCCEEEEEECC--------------------------------CCcEEEEecCCCceEEEecCCCce--EE-E
Q psy5751 136 NSLAVDFRTDELCWVDAD--------------------------------SKSLECMTIRNRVRRKVYSNCTYP--FG-L 180 (232)
Q Consensus 136 ~~l~~d~~~~~Ly~~d~~--------------------------------~~~i~~~~~~g~~~~~~~~~~~~p--~g-l 180 (232)
.+.++|+..+.+|+.... .+.+..+|+..++..--.. ...| -+ +
T Consensus 390 ~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~-~~~p~~~~~l 468 (527)
T TIGR03075 390 QPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHK-EDFPLWGGVL 468 (527)
T ss_pred CCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEec-CCCCCCCcce
Confidence 468899988888876433 1235555555544332222 2222 13 3
Q ss_pred EEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeE
Q psy5751 181 SITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMY 221 (232)
Q Consensus 181 a~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~ 221 (232)
+..++.+|+ -..++.++.++.. |+.+...+........|+
T Consensus 469 ~t~g~lvf~-g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ 509 (527)
T TIGR03075 469 ATAGDLVFY-GTLEGYFKAFDAKTGEELWKFKTGSGIVGPPV 509 (527)
T ss_pred EECCcEEEE-ECCCCeEEEEECCCCCEeEEEeCCCCceecCE
Confidence 334454444 4456789999987 777776665433333344
No 229
>KOG0269|consensus
Probab=75.40 E-value=66 Score=29.46 Aligned_cols=138 Identities=9% Similarity=0.030 Sum_probs=81.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+..++|+..+-.+.++-.-+. .|.-+++.......+...+...++++.+-+..++.|++-..+|.++..|+.-..+-.+
T Consensus 136 ~~~ldfh~tep~iliSGSQDg-~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~ 214 (839)
T KOG0269|consen 136 ANKLDFHSTEPNILISGSQDG-TVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEK 214 (839)
T ss_pred eeeeeeccCCccEEEecCCCc-eEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHH
Confidence 346778876767766665555 7777887754433333345578899999988899999999999999999866442111
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE--EEEEcCCCCCcceEEEeCCC
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE--IFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~--~~~~~~~~~~p~~l~~d~~~ 144 (232)
--..-..| .+++++.-++-|.+..++ ..+|...++.+.... ..++. ....+-+..-|..
T Consensus 215 k~~AH~Gp-V~c~nwhPnr~~lATGGR-DK~vkiWd~t~~~~~~~~tInT--iapv~rVkWRP~~ 275 (839)
T KOG0269|consen 215 KLTAHNGP-VLCLNWHPNREWLATGGR-DKMVKIWDMTDSRAKPKHTINT--IAPVGRVKWRPAR 275 (839)
T ss_pred HhhcccCc-eEEEeecCCCceeeecCC-CccEEEEeccCCCccceeEEee--cceeeeeeeccCc
Confidence 10011112 344444345556666553 456777777654322 22222 3334455555543
No 230
>KOG0275|consensus
Probab=74.68 E-value=45 Score=27.21 Aligned_cols=93 Identities=10% Similarity=-0.027 Sum_probs=56.5
Q ss_pred cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC--CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751 47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK--DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE 124 (232)
Q Consensus 47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~ 124 (232)
..+.+-+.+---++.....+.++.+++.|...+.+.+. ....-...+++|.+.++|... +...++....-....+
T Consensus 396 nsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcig---ED~vlYCF~~~sG~LE 472 (508)
T KOG0275|consen 396 NSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIG---EDGVLYCFSVLSGKLE 472 (508)
T ss_pred eeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEc---cCcEEEEEEeecCcee
Confidence 34444444444445555567888888888877766652 223344566888888888776 3456777765544443
Q ss_pred EEEEcCCCCCcceEEEeCC
Q psy5751 125 IFLKAADLKLPNSLAVDFR 143 (232)
Q Consensus 125 ~~~~~~~~~~p~~l~~d~~ 143 (232)
..+... ..-+-|++-+|.
T Consensus 473 ~tl~Vh-EkdvIGl~HHPH 490 (508)
T KOG0275|consen 473 RTLPVH-EKDVIGLTHHPH 490 (508)
T ss_pred eeeecc-cccccccccCcc
Confidence 333322 346778888776
No 231
>KOG0649|consensus
Probab=74.47 E-value=40 Score=26.47 Aligned_cols=150 Identities=10% Similarity=0.138 Sum_probs=91.6
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
++-.|+.++.++.+- ++. .++-++++....+..+.........++....++-|+ +..+.+.+...|.........++
T Consensus 119 am~ldP~enSi~~Ag-GD~-~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qil-sG~EDGtvRvWd~kt~k~v~~ie 195 (325)
T KOG0649|consen 119 AMWLDPSENSILFAG-GDG-VIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQIL-SGAEDGTVRVWDTKTQKHVSMIE 195 (325)
T ss_pred eeEeccCCCcEEEec-CCe-EEEEEEecCCEEEEEEcCCcceeeeeeecccCccee-ecCCCccEEEEeccccceeEEec
Confidence 788899999999887 556 899999997777666665556777787766566665 77777888888887776655554
Q ss_pred ----CCCCCce----EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 84 ----KDLVNPR----GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 84 ----~~~~~p~----~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
.+.-+|. =+|++-..+.|.. .. ..++....+.....+.++... .....+.|+. .+.++-...+
T Consensus 196 ~yk~~~~lRp~~g~wigala~~edWlvC-Gg---Gp~lslwhLrsse~t~vfpip--a~v~~v~F~~---d~vl~~G~g~ 266 (325)
T KOG0649|consen 196 PYKNPNLLRPDWGKWIGALAVNEDWLVC-GG---GPKLSLWHLRSSESTCVFPIP--ARVHLVDFVD---DCVLIGGEGN 266 (325)
T ss_pred cccChhhcCcccCceeEEEeccCceEEe-cC---CCceeEEeccCCCceEEEecc--cceeEeeeec---ceEEEecccc
Confidence 2222331 1344433554432 22 334555666666655555432 1223444443 3334433345
Q ss_pred cEEEEecCCC
Q psy5751 156 SLECMTIRNR 165 (232)
Q Consensus 156 ~i~~~~~~g~ 165 (232)
+|....+.|.
T Consensus 267 ~v~~~~l~Gv 276 (325)
T KOG0649|consen 267 HVQSYTLNGV 276 (325)
T ss_pred ceeeeeeccE
Confidence 6777766663
No 232
>KOG1538|consensus
Probab=73.67 E-value=71 Score=28.99 Aligned_cols=57 Identities=23% Similarity=0.158 Sum_probs=35.1
Q ss_pred CceEEEEEEC-CEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCCC
Q psy5751 175 TYPFGLSITD-EKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231 (232)
Q Consensus 175 ~~p~gla~~~-~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~~ 231 (232)
....+.++.. |..+.--..++.|..=|+.|+..-.|.-|+...+-.++|+.-+.+=|
T Consensus 133 ~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~ 190 (1081)
T KOG1538|consen 133 SRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGE 190 (1081)
T ss_pred eeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCC
Confidence 3456777753 44444455667777777777776667666555555677776655544
No 233
>KOG0299|consensus
Probab=72.52 E-value=61 Score=27.70 Aligned_cols=120 Identities=13% Similarity=0.021 Sum_probs=75.3
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe---C------CCC---CceEEEEeCCCCeEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS---K------DLV---NPRGIVVHPYYRKLFWS 104 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---~------~~~---~p~~iavd~~~~~ly~~ 104 (232)
.+...+-..+..+++- +..-|++...++.|...++--..+..+.. . ..+ ...++|+-+ +..|+.+
T Consensus 321 lifrg~~~sidcv~~I--n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~-~sdL~as 397 (479)
T KOG0299|consen 321 LIFRGGEGSIDCVAFI--NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIP-GSDLLAS 397 (479)
T ss_pred eeeeCCCCCeeeEEEe--cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecc-cCceEEe
Confidence 4444444567777765 45677888889999988876554322221 0 111 345788887 6667777
Q ss_pred EcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 105 DWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 105 d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.+..+.-++|...-+-.....+.+-......|.|+|...+.+|+..-...+++.|
T Consensus 398 GS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGR 452 (479)
T KOG0299|consen 398 GSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGR 452 (479)
T ss_pred cCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccce
Confidence 6654566677766554555555544434567899999987778777555554433
No 234
>KOG0306|consensus
Probab=72.30 E-value=80 Score=28.98 Aligned_cols=197 Identities=15% Similarity=0.110 Sum_probs=103.1
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEe------CCCCCCEEEEe------CCCCCceE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN------LNDDQPKVIVS------KDLVNPRG 91 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~------~~g~~~~~~~~------~~~~~p~~ 91 (232)
.+..+++.....-+.+...-...+.|++-+.+ .=+++-...+.+...+ ..|...+++-- +=-.....
T Consensus 435 el~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~-~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~ 513 (888)
T KOG0306|consen 435 ELQVFDLASASLVETIRAHDGAIWSISLSPDN-KGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLC 513 (888)
T ss_pred ceEEEEeehhhhhhhhhccccceeeeeecCCC-CceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEE
Confidence 55555555433212222222456677776633 3344544444443333 22433332111 11234567
Q ss_pred EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCc-ceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EE
Q psy5751 92 IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLP-NSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RK 169 (232)
Q Consensus 92 iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p-~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~ 169 (232)
+.++|...+|-++-.+ +.+..+-+|.-..-+-+-. ..-| ..+-++++ ..|.+|-+....|-..-+|=++. +-
T Consensus 514 v~~Spdgk~LaVsLLd---nTVkVyflDtlKFflsLYG--HkLPV~smDIS~D-SklivTgSADKnVKiWGLdFGDCHKS 587 (888)
T KOG0306|consen 514 VSVSPDGKLLAVSLLD---NTVKVYFLDTLKFFLSLYG--HKLPVLSMDISPD-SKLIVTGSADKNVKIWGLDFGDCHKS 587 (888)
T ss_pred EEEcCCCcEEEEEecc---CeEEEEEecceeeeeeecc--cccceeEEeccCC-cCeEEeccCCCceEEeccccchhhhh
Confidence 7788866655555433 3455555554433222222 2223 46777777 56777766665555554553322 22
Q ss_pred EecCCCceEEEEE-ECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 170 VYSNCTYPFGLSI-TDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 170 ~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+...-...+.+.+ .+..+|||-...+.|.+-+ |..-+.++.-..+..+.+-+|+.+.+
T Consensus 588 ~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD--g~kFe~iq~L~~H~~ev~cLav~~~G 646 (888)
T KOG0306|consen 588 FFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD--GEKFEEIQKLDGHHSEVWCLAVSPNG 646 (888)
T ss_pred hhcccCceeEEEEcccceeEEEecCcceEEeec--hhhhhhheeeccchheeeeeEEcCCC
Confidence 3222233455665 4889999998888765543 55555555545667788888888764
No 235
>KOG0269|consensus
Probab=71.87 E-value=82 Score=28.92 Aligned_cols=108 Identities=13% Similarity=0.042 Sum_probs=71.6
Q ss_pred CeEEEEeCCCCeEEEEeCCCCCCEE---EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCC
Q psy5751 56 RVLYWTDSQMDTISMANLNDDQPKV---IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADL 132 (232)
Q Consensus 56 ~~ly~~d~~~~~I~~~~~~g~~~~~---~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~ 132 (232)
.++..+-..++.|.+.|+.-..+.. ++.++-...+-+.+++..-.+..+... .+.|...++............ -
T Consensus 100 ~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQ--Dg~vK~~DlR~~~S~~t~~~n-S 176 (839)
T KOG0269|consen 100 SNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQ--DGTVKCWDLRSKKSKSTFRSN-S 176 (839)
T ss_pred hhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCC--CceEEEEeeeccccccccccc-c
Confidence 3455566777888888887743322 333444455667777766777666543 566777777655444333332 4
Q ss_pred CCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 133 KLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 133 ~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
....++.+.+..+..|.+-...|.+...|++-.+
T Consensus 177 ESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~ 210 (839)
T KOG0269|consen 177 ESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD 210 (839)
T ss_pred hhhhceeeccCCCceEEEecCCceEEEeeccCch
Confidence 5678899999888888887778888888887543
No 236
>KOG1445|consensus
Probab=71.79 E-value=34 Score=30.65 Aligned_cols=192 Identities=13% Similarity=0.096 Sum_probs=104.9
Q ss_pred EEEEeC-CCCEEEEE-EcCCCCcEEEEEcCCCc-----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 4 GITVDC-VEGQVYYS-SVADKSSIKRAHLDGKN-----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 4 ~i~~d~-~~~~ly~~-d~~~~~~i~~~~~~g~~-----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.+.||+ ..++|-++ |.+.- +|+++..+|.. .++++......+..|.+++....+.-+-..+-.|...|+...
T Consensus 632 Dl~WdPFD~~rLAVa~ddg~i-~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~ 710 (1012)
T KOG1445|consen 632 DLHWDPFDDERLAVATDDGQI-NLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANA 710 (1012)
T ss_pred ecccCCCChHHeeecccCceE-EEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhh
Confidence 455665 33455544 33333 56676666643 234444455677777777766555544444567888887665
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
....-+..+.....++|-+| .|+..-+-.. .++|.+++.......+. + ...|.| ..+-++.|+-. .+.
T Consensus 711 ~~~~~l~gHtdqIf~~AWSp-dGr~~AtVcK--Dg~~rVy~Prs~e~pv~--E--g~gpvg----tRgARi~wacd-gr~ 778 (1012)
T KOG1445|consen 711 KLYSRLVGHTDQIFGIAWSP-DGRRIATVCK--DGTLRVYEPRSREQPVY--E--GKGPVG----TRGARILWACD-GRI 778 (1012)
T ss_pred hhhheeccCcCceeEEEECC-CCcceeeeec--CceEEEeCCCCCCCccc--c--CCCCcc----CcceeEEEEec-CcE
Confidence 54444445777889999998 5555444332 46677776665433321 1 234544 22345555421 345
Q ss_pred EEEEecCCCceEEE--e--cCCC-c----------eEEEE----EECCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 157 LECMTIRNRVRRKV--Y--SNCT-Y----------PFGLS----ITDEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 157 i~~~~~~g~~~~~~--~--~~~~-~----------p~gla----~~~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
|.+.-+|....+.+ + +.+. . |.-|. .+.+.||.|--+..+|+.+..--+...
T Consensus 779 viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy 849 (1012)
T KOG1445|consen 779 VIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPY 849 (1012)
T ss_pred EEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCCce
Confidence 66666665433222 1 1111 1 11111 246788888877777777665544444
No 237
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=71.19 E-value=70 Score=27.84 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=23.8
Q ss_pred eEEEeCCCCEEEEEECC-----------------CCcEEEEecCCCceEEE
Q psy5751 137 SLAVDFRTDELCWVDAD-----------------SKSLECMTIRNRVRRKV 170 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~-----------------~~~i~~~~~~g~~~~~~ 170 (232)
..++|+.++++|+.... .+.+..++.+.++..--
T Consensus 221 ~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~ 271 (488)
T cd00216 221 SPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWF 271 (488)
T ss_pred CeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEE
Confidence 46788777899998432 23799999887665433
No 238
>KOG0270|consensus
Probab=71.19 E-value=64 Score=27.43 Aligned_cols=59 Identities=17% Similarity=0.254 Sum_probs=44.6
Q ss_pred EEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEc
Q psy5751 48 GLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDW 106 (232)
Q Consensus 48 gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~ 106 (232)
.|+.....++|..+-.....+...|++...++..+.........+..++.......+..
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs 306 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGS 306 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEecc
Confidence 44555556777777777888999999998888777756667788888887777766654
No 239
>KOG1409|consensus
Probab=70.93 E-value=45 Score=27.48 Aligned_cols=111 Identities=10% Similarity=0.114 Sum_probs=60.8
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-EEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-VIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~ 82 (232)
++.+|.. ..|+.|......+.++..++-..-..+.........++-|+..+.|| +.....++.+.++.|..-. ...
T Consensus 160 ~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~Lf-Sg~~d~~vi~wdigg~~g~~~el 236 (404)
T KOG1409|consen 160 ALQFDAL--YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLF-SGASDHSVIMWDIGGRKGTAYEL 236 (404)
T ss_pred CCceeeE--EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEE-eccccCceEEEeccCCcceeeee
Confidence 4445542 44555544332344444444443334445556778888898666665 7777789999999886532 222
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
.........+...+....|+-++. .+.|+.-+|+-
T Consensus 237 ~gh~~kV~~l~~~~~t~~l~S~~e---dg~i~~w~mn~ 271 (404)
T KOG1409|consen 237 QGHNDKVQALSYAQHTRQLISCGE---DGGIVVWNMNV 271 (404)
T ss_pred ccchhhhhhhhhhhhheeeeeccC---CCeEEEEeccc
Confidence 233344444444444555655553 34466666553
No 240
>KOG0772|consensus
Probab=70.88 E-value=72 Score=27.88 Aligned_cols=160 Identities=9% Similarity=0.008 Sum_probs=92.4
Q ss_pred EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-----EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcE
Q psy5751 39 ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-----KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKI 113 (232)
Q Consensus 39 ~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-----~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I 113 (232)
+..+......+++|+.+-++| +..-...|...|+.|-.. +.+........+.+...+..+.|.+.. + .+++
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~~-sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs-g--~aqa 238 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARFV-SGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS-G--SAQA 238 (641)
T ss_pred ccCCceEEEEeeecCCCceee-eccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe-c--Ccce
Confidence 344556778899999666665 666666788888877431 222223445668899998666665555 3 4567
Q ss_pred EEEeCCCCCcEEEEEcC-----------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC--CceEEEec---CC-C-
Q psy5751 114 EWSNLDGTDREIFLKAA-----------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN--RVRRKVYS---NC-T- 175 (232)
Q Consensus 114 ~~~~~~g~~~~~~~~~~-----------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g--~~~~~~~~---~~-~- 175 (232)
..++-+|....-....+ +...-+.-+.+|.+...|.+-+..+.+...+.+. ...+++.. +. .
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 77888877554333322 1233455677888888888877766555544543 33444432 11 1
Q ss_pred ceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 176 YPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 176 ~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
.|..+++. .+.+.-+-...+.|+.-+.
T Consensus 319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~ 346 (641)
T KOG0772|consen 319 PVTSCAWNRDGKLIAAGCLDGSIQIWDK 346 (641)
T ss_pred CceeeecCCCcchhhhcccCCceeeeec
Confidence 13355553 4444433444455544443
No 241
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=70.81 E-value=49 Score=25.92 Aligned_cols=162 Identities=9% Similarity=0.017 Sum_probs=95.4
Q ss_pred CccEEEEeecCCeEEEEe--CCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 45 SPEGLTFDWVNRVLYWTD--SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d--~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
.+...++...++.+.+.. .....+++...++.....+....+. .-.+++ .+.++..+......++.+...++..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~---~PS~d~-~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLT---RPSWDP-DGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccc---cccccC-CCCEEEEEcCCCceEEEEecCCCcc
Confidence 577788887777777766 5556788887776655544323443 446887 4888888765433333332345555
Q ss_pred cEEEEEcCCCC-CcceEEEeCCCCEEEEEE--CCCCcEEEEec--CCCc-eEEEe-------cCCCceEEEEE-ECCEEE
Q psy5751 123 REIFLKAADLK-LPNSLAVDFRTDELCWVD--ADSKSLECMTI--RNRV-RRKVY-------SNCTYPFGLSI-TDEKYY 188 (232)
Q Consensus 123 ~~~~~~~~~~~-~p~~l~~d~~~~~Ly~~d--~~~~~i~~~~~--~g~~-~~~~~-------~~~~~p~gla~-~~~~ly 188 (232)
..+.+....+. ....|.+++++.|+=+.- ...++|+...+ ++.. ...+. ........+++ .++.|.
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~ 180 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLV 180 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEE
Confidence 55444433133 567899999988875554 23456666543 2222 22221 12345567887 466666
Q ss_pred EE-eCCCCcEEE-EeCCCCCcceE
Q psy5751 189 WT-DWKTNRIES-ANKEGERAPSI 210 (232)
Q Consensus 189 ~t-d~~~~~i~~-~~~~g~~~~~i 210 (232)
+. ......+.. +..+|...+.+
T Consensus 181 V~~~~~~~~~~~~v~~dG~~~~~l 204 (253)
T PF10647_consen 181 VLGRSAGGPVVRLVSVDGGPSTPL 204 (253)
T ss_pred EEeCCCCCceeEEEEccCCccccc
Confidence 65 444444666 88888776644
No 242
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=69.23 E-value=72 Score=30.02 Aligned_cols=97 Identities=10% Similarity=0.188 Sum_probs=59.5
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCCCEEE-EeCCCCCceEEEEeCCCCeEEE-EEcCC--CCCcEEEEeCCCCCcE---EEE
Q psy5751 55 NRVLYWTDSQMDTISMANLNDDQPKVI-VSKDLVNPRGIVVHPYYRKLFW-SDWNR--SGPKIEWSNLDGTDRE---IFL 127 (232)
Q Consensus 55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~-~~~~~~~p~~iavd~~~~~ly~-~d~~~--~~~~I~~~~~~g~~~~---~~~ 127 (232)
++..|+.+ .+++|...|.+|...+.+ +. +......-+++|.++.|=+ +.... +...|++.+|+..... .-+
T Consensus 319 tkiAfv~~-~~~~L~~~D~dG~n~~~ve~~-~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~v 396 (912)
T TIGR02171 319 AKLAFRND-VTGNLAYIDYTKGASRAVEIE-DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPV 396 (912)
T ss_pred eeEEEEEc-CCCeEEEEecCCCCceEEEec-CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeec
Confidence 56677776 445999999999988876 54 2223344567777777766 43333 3667999888765432 223
Q ss_pred EcCCCCCcceEEEeC-CCCEEEEEECCCC
Q psy5751 128 KAADLKLPNSLAVDF-RTDELCWVDADSK 155 (232)
Q Consensus 128 ~~~~~~~p~~l~~d~-~~~~Ly~~d~~~~ 155 (232)
.. ..-|.=-.+.. +.--+|++|.+++
T Consensus 397 e~--aaiprwrv~e~gdt~ivyv~~a~nn 423 (912)
T TIGR02171 397 EN--AAIPRWRVLENGDTVIVYVSDASNN 423 (912)
T ss_pred cc--ccccceEecCCCCeEEEEEcCCCCC
Confidence 32 44454333332 3346788887643
No 243
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=69.01 E-value=46 Score=24.86 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=73.4
Q ss_pred eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751 67 TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
.|+.++..+.....+--..-....+++-.|.+..+.+..... ..+|...++.+.....+ . -...+.+.++|.+..
T Consensus 40 ~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~-~~~v~lyd~~~~~i~~~---~-~~~~n~i~wsP~G~~ 114 (194)
T PF08662_consen 40 ELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSM-PAKVTLYDVKGKKIFSF---G-TQPRNTISWSPDGRF 114 (194)
T ss_pred EEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccC-CcccEEEcCcccEeEee---c-CCCceEEEECCCCCE
Confidence 466665555444333222223478899998666665554332 34677777763333322 2 345688999999888
Q ss_pred EEEEECC--CCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCC------CCcEEEEeCCCCCcc
Q psy5751 147 LCWVDAD--SKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWK------TNRIESANKEGERAP 208 (232)
Q Consensus 147 Ly~~d~~--~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~------~~~i~~~~~~g~~~~ 208 (232)
|..+..+ .+.+...+.+. .+.+.. .......+++. .|+.+.|-.. .+.+...+..|..+.
T Consensus 115 l~~~g~~n~~G~l~~wd~~~--~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~~l~ 184 (194)
T PF08662_consen 115 LVLAGFGNLNGDLEFWDVRK--KKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGRLLY 184 (194)
T ss_pred EEEEEccCCCcEEEEEECCC--CEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCeEeE
Confidence 8777543 45677777773 333322 22234566664 4444433222 233444455555443
No 244
>KOG0918|consensus
Probab=68.95 E-value=34 Score=28.80 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=23.3
Q ss_pred eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
.+|-|+-..+.||++.|- .+-|+++++....
T Consensus 315 TDilISmDDRFLYvs~WL--HGDirQYdIsDP~ 345 (476)
T KOG0918|consen 315 TDILISLDDRFLYVSNWL--HGDIRQYDISDPK 345 (476)
T ss_pred heeEEeecCcEEEEEeee--ecceeeeccCCCC
Confidence 466666669999999997 4568888876443
No 245
>KOG1274|consensus
Probab=68.05 E-value=1.1e+02 Score=28.75 Aligned_cols=148 Identities=10% Similarity=0.078 Sum_probs=93.8
Q ss_pred EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEE
Q psy5751 14 VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIV 93 (232)
Q Consensus 14 ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia 93 (232)
.|.+-..++ .|.++.++......++..---....++++..+..+- +-...-.|-.++++....+..+...-.....+.
T Consensus 68 ~f~~~s~~~-tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~ia-agsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~ 145 (933)
T KOG1274|consen 68 HFLTGSEQN-TVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIA-AGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLS 145 (933)
T ss_pred ceEEeeccc-eEEEeeCCCCCccceeeeeeccceEEEEecCCcEEE-eecCceeEEEEeccccchheeecccCCceeeee
Confidence 455555566 788888887666556654345678899998555555 444445788888887777766665666667999
Q ss_pred EeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------C-CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 94 VHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------D-LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 94 vd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~-~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
++|.+..|-++.. .+++...+++.......+... . -.--.-++.+|.++.+-+. ...+.|..++.+|..
T Consensus 146 ~~p~~~fLAvss~---dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~-~~d~~Vkvy~r~~we 221 (933)
T KOG1274|consen 146 YDPKGNFLAVSSC---DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVP-PVDNTVKVYSRKGWE 221 (933)
T ss_pred EcCCCCEEEEEec---CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEee-ccCCeEEEEccCCce
Confidence 9996666666654 456888887654332222110 0 1122456788887776555 335667777777654
Q ss_pred e
Q psy5751 167 R 167 (232)
Q Consensus 167 ~ 167 (232)
.
T Consensus 222 ~ 222 (933)
T KOG1274|consen 222 L 222 (933)
T ss_pred e
Confidence 4
No 246
>PHA02790 Kelch-like protein; Provisional
Probab=67.58 E-value=83 Score=27.31 Aligned_cols=162 Identities=14% Similarity=0.078 Sum_probs=85.1
Q ss_pred CCeEEEEeCCC-----CeEEEEeCCCCCCEEEEeCCCCCce---EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE
Q psy5751 55 NRVLYWTDSQM-----DTISMANLNDDQPKVIVSKDLVNPR---GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF 126 (232)
Q Consensus 55 ~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~~~~~~p~---~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~ 126 (232)
++.||+..... ..+.+++.....-..+ ..+..|+ +.+.. ++.||..-.......+++.+..... -..
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~--~~m~~~r~~~~~v~~--~~~iYviGG~~~~~sve~ydp~~n~-W~~ 345 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPI--PPMNSPRLYASGVPA--NNKLYVVGGLPNPTSVERWFHGDAA-WVN 345 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEEC--CCCCchhhcceEEEE--CCEEEEECCcCCCCceEEEECCCCe-EEE
Confidence 57888876432 3456666554321111 1333332 33333 7999998653223457777654322 111
Q ss_pred EEcCCCCCcc-eEEEeCCCCEEEEEECC---CCcEEEEecCCCceEEEecCCCceE---EEEEECCEEEEEeCCCCcEEE
Q psy5751 127 LKAADLKLPN-SLAVDFRTDELCWVDAD---SKSLECMTIRNRVRRKVYSNCTYPF---GLSITDEKYYWTDWKTNRIES 199 (232)
Q Consensus 127 ~~~~~~~~p~-~l~~d~~~~~Ly~~d~~---~~~i~~~~~~g~~~~~~~~~~~~p~---gla~~~~~ly~td~~~~~i~~ 199 (232)
+. + +..|. +.+.-..+++||+.=.. ...+.+.+++...-+.+ ..+..|. +++..+++||+.- +.+.+
T Consensus 346 ~~-~-l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~-~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ 419 (480)
T PHA02790 346 MP-S-LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFG-PSTYYPHYKSCALVFGRRLFLVG---RNAEF 419 (480)
T ss_pred CC-C-CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeC-CCCCCccccceEEEECCEEEEEC---CceEE
Confidence 11 1 33332 22222335899988322 24577777765433322 2233332 5556799999975 34678
Q ss_pred EeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 200 ANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 200 ~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+++....++.+. +...+..-.|+++..+
T Consensus 420 ydp~~~~W~~~~-~m~~~r~~~~~~v~~~ 447 (480)
T PHA02790 420 YCESSNTWTLID-DPIYPRDNPELIIVDN 447 (480)
T ss_pred ecCCCCcEeEcC-CCCCCccccEEEEECC
Confidence 888877777553 2333344456666543
No 247
>KOG1273|consensus
Probab=66.40 E-value=71 Score=26.11 Aligned_cols=190 Identities=12% Similarity=0.099 Sum_probs=106.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
...|+.- +.+...-..++ +|...++.......++......+.+++-...++.|. +.+....|...|+-...+..-+.
T Consensus 28 ~~~Fs~~-G~~lAvGc~nG-~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~Ll-tsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 28 CCQFSRW-GDYLAVGCANG-RVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLL-TSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred eEEeccC-cceeeeeccCC-cEEEEEccccchhhhhhccccceeEEEecCCCCEee-eecCCceeEEEeccCCCceeEEE
Confidence 4455552 33333344555 888888887666667766677888899888677665 66666788888764443322222
Q ss_pred CCCCC-ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC---CCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 84 KDLVN-PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD---LKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 84 ~~~~~-p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~---~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
++. ..+.-.+|.+.+.+++-.-...+.+. ........++....+ -..++...+|+.++.+|.. ..-|.+..
T Consensus 105 --f~spv~~~q~hp~k~n~~va~~~~~sp~vi--~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitG-tsKGkllv 179 (405)
T KOG1273|consen 105 --FDSPVWGAQWHPRKRNKCVATIMEESPVVI--DFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITG-TSKGKLLV 179 (405)
T ss_pred --ccCccceeeeccccCCeEEEEEecCCcEEE--EecCCceeeccCCCccccccccccccccCCCCEEEEe-cCcceEEE
Confidence 223 35677888777777764322223332 233233333332221 1234444678876666655 44566777
Q ss_pred EecCCCceEEEec--CCCceEEEEE-ECCEEEEEeCCCCcEEEEe
Q psy5751 160 MTIRNRVRRKVYS--NCTYPFGLSI-TDEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 160 ~~~~g~~~~~~~~--~~~~p~gla~-~~~~ly~td~~~~~i~~~~ 201 (232)
.+.+..+...-.. ..+....+.+ ..++.+..+...+.|....
T Consensus 180 ~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye 224 (405)
T KOG1273|consen 180 YDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYE 224 (405)
T ss_pred EecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEe
Confidence 7666543211111 1233445565 3677777777766555554
No 248
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=65.98 E-value=61 Score=25.22 Aligned_cols=119 Identities=14% Similarity=-0.007 Sum_probs=75.4
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE----EcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL----KAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~----~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
.....||-+.|.+|.||-... .++||.++......+.+- .......+-++.|.|.-+||.+.. .++.-.|++
T Consensus 26 ge~l~GID~Rpa~G~LYgl~~---~g~lYtIn~~tG~aT~vg~s~~~~al~g~~~gvDFNP~aDRlRvvs-~~GqNlR~n 101 (236)
T PF14339_consen 26 GESLVGIDFRPANGQLYGLGS---TGRLYTINPATGAATPVGASPLTVALSGTAFGVDFNPAADRLRVVS-NTGQNLRLN 101 (236)
T ss_pred CCeEEEEEeecCCCCEEEEeC---CCcEEEEECCCCeEEEeecccccccccCceEEEecCcccCcEEEEc-cCCcEEEEC
Confidence 345678999999999998742 467999998877665552 111112356888888889998883 367778888
Q ss_pred cCCCceEEEecC----------CCceE--EEEEEC--------CEEEEEeCCCCcEEEEe-CCCCCcc
Q psy5751 162 IRNRVRRKVYSN----------CTYPF--GLSITD--------EKYYWTDWKTNRIESAN-KEGERAP 208 (232)
Q Consensus 162 ~~g~~~~~~~~~----------~~~p~--gla~~~--------~~ly~td~~~~~i~~~~-~~g~~~~ 208 (232)
++.+.....-.. ...|. +.|+.+ -.||--|.....+..-+ +....+.
T Consensus 102 pdtGav~~~Dg~L~y~~gd~~~G~~p~v~aaAYTNs~~g~~t~TtLy~ID~~~~~Lv~Q~ppN~GtL~ 169 (236)
T PF14339_consen 102 PDTGAVTIVDGNLAYAAGDMNAGTTPGVTAAAYTNSFAGATTSTTLYDIDTTLDALVTQNPPNDGTLN 169 (236)
T ss_pred CCCCCceeccCccccCCCccccCCCCceEEEEEecccCCCccceEEEEEecCCCeEEEecCCCCCcEE
Confidence 886543222111 12333 444421 25888888888877774 3334333
No 249
>KOG4227|consensus
Probab=65.22 E-value=83 Score=26.48 Aligned_cols=110 Identities=14% Similarity=0.123 Sum_probs=64.3
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
...+..|++|..+.+|| +...-+.+..-+...+....++. .+-....+|.++|. ..+|.+... ...+...+..-
T Consensus 105 ~SNIF~L~F~~~N~~~~-SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~-DN~~~~~t~--~~~V~~~D~Rd 180 (609)
T KOG4227|consen 105 RSNIFSLEFDLENRFLY-SGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPT-DNTLIVVTR--AKLVSFIDNRD 180 (609)
T ss_pred ccceEEEEEccCCeeEe-cCCCcceeEeeecccceeeeeecccCcccceeecccCCC-CceEEEEec--CceEEEEeccC
Confidence 35778999998777777 66666788888888877655555 33446788889986 444444332 23344444322
Q ss_pred CC--cEE-EEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 121 TD--REI-FLKAADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 121 ~~--~~~-~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
.. ... ++.+. -.......|.|..-+|..+.+..+-+
T Consensus 181 ~~~~~~~~~~AN~-~~~F~t~~F~P~~P~Li~~~~~~~G~ 219 (609)
T KOG4227|consen 181 RQNPISLVLPANS-GKNFYTAEFHPETPALILVNSETGGP 219 (609)
T ss_pred CCCCCceeeecCC-CccceeeeecCCCceeEEeccccCCC
Confidence 21 122 22221 33445567777767777665544433
No 250
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=63.57 E-value=85 Score=26.00 Aligned_cols=108 Identities=9% Similarity=-0.021 Sum_probs=59.2
Q ss_pred CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-CCCcc-eEEEeCCCCEEEEEECCCCcEEEEec-CCCceEEE-ecC
Q psy5751 98 YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-LKLPN-SLAVDFRTDELCWVDADSKSLECMTI-RNRVRRKV-YSN 173 (232)
Q Consensus 98 ~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-~~~p~-~l~~d~~~~~Ly~~d~~~~~i~~~~~-~g~~~~~~-~~~ 173 (232)
++.+|+... .+.|+..+.++....--..... ....+ ++..+ +++||+.+... ++++++. +|...=.. ...
T Consensus 68 dg~v~~~~~---~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~--~G~i~~g~~~g-~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 68 DGTVYVGTR---DGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGS--DGKIYVGSWDG-KLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred CCeEEEecC---CCcEEEEeCCCCcEEecccCcCcceeccCceEEe--CCeEEEecccc-eEEEEECCCCcEEEEEecCC
Confidence 788888743 3467777777665321000000 01222 22233 48899987644 8999999 45433212 112
Q ss_pred -CCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751 174 -CTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIAL 212 (232)
Q Consensus 174 -~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~ 212 (232)
........+.++.+|+.. ..+.+..+++. |........
T Consensus 142 ~~~~~~~~v~~~~~v~~~s-~~g~~~al~~~tG~~~W~~~~ 181 (370)
T COG1520 142 SPYYASPPVVGDGTVYVGT-DDGHLYALNADTGTLKWTYET 181 (370)
T ss_pred CeEEecCcEEcCcEEEEec-CCCeEEEEEccCCcEEEEEec
Confidence 011122234577888875 45789999998 666555444
No 251
>KOG0264|consensus
Probab=63.49 E-value=92 Score=26.40 Aligned_cols=115 Identities=10% Similarity=0.037 Sum_probs=76.5
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCC--CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDG--KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK- 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g--~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~- 79 (232)
..++|++....||-+-..+. ++...++.. ..........-.....+++.+-+..|.-+-...+.+...|+......
T Consensus 231 eDV~~h~~h~~lF~sv~dd~-~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~l 309 (422)
T KOG0264|consen 231 EDVAWHPLHEDLFGSVGDDG-KLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPL 309 (422)
T ss_pred ehhhccccchhhheeecCCC-eEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCc
Confidence 35678888888888777777 888888874 22222333334678899999988999988888889999988665432
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
..+...-.....+.-+|....++-+... .+++.+.++..
T Consensus 310 h~~e~H~dev~~V~WSPh~etvLASSg~--D~rl~vWDls~ 348 (422)
T KOG0264|consen 310 HTFEGHEDEVFQVEWSPHNETVLASSGT--DRRLNVWDLSR 348 (422)
T ss_pred eeccCCCcceEEEEeCCCCCceeEeccc--CCcEEEEeccc
Confidence 2333444455667777777777665542 44566655543
No 252
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=63.03 E-value=95 Score=26.38 Aligned_cols=92 Identities=12% Similarity=0.129 Sum_probs=49.6
Q ss_pred CcceEEEeCCCCEEEEEECCCCcEEEEecCCCceE-EE-ecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEE
Q psy5751 134 LPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR-KV-YSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIA 211 (232)
Q Consensus 134 ~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~-~~-~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~ 211 (232)
....|++++.++.|-.-. ..+.++.+.-|-.+.- .+ ......|..+++=++...+..| ...+.-+.+++...+ ..
T Consensus 218 ~i~~iavSpng~~iAl~t-~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~-~~~l~lvg~~~~~~~-~~ 294 (410)
T PF04841_consen 218 PIIKIAVSPNGKFIALFT-DSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW-EDELLLVGPDGDSIS-FW 294 (410)
T ss_pred CeEEEEECCCCCEEEEEE-CCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe-CCEEEEECCCCCceE-Ee
Confidence 456788888767664332 2456666655433221 11 2245678888885443233333 456777777776644 22
Q ss_pred ec--cCCcceeEEEEEEcC
Q psy5751 212 LD--MMGTTYMYGIAAVPS 228 (232)
Q Consensus 212 ~~--~~~~~~p~gi~~~~~ 228 (232)
+. ..-.++..||-|+..
T Consensus 295 ~~~~~~l~~E~DG~riit~ 313 (410)
T PF04841_consen 295 YDGPVILVSEIDGVRIITS 313 (410)
T ss_pred ccCceEEeccCCceEEEeC
Confidence 21 112456677766654
No 253
>KOG2919|consensus
Probab=61.42 E-value=91 Score=25.62 Aligned_cols=120 Identities=13% Similarity=-0.021 Sum_probs=72.0
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE---eCC---CCCceEEEEeCCCCeEEEEEcCCCCCcEEE
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV---SKD---LVNPRGIVVHPYYRKLFWSDWNRSGPKIEW 115 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---~~~---~~~p~~iavd~~~~~ly~~d~~~~~~~I~~ 115 (232)
.+....+|++.+.+..||......-+|+-....|..+.+-. ... ..-..-++++|.+-.++-....... +-.
T Consensus 157 e~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~--~gi 234 (406)
T KOG2919|consen 157 EYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQR--VGI 234 (406)
T ss_pred hhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccce--eee
Confidence 35677889999989999977665444444444555433221 111 1123456788877655544332122 333
Q ss_pred EeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751 116 SNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 116 ~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g 164 (232)
..-++...--++... -.....|.+.+++++||.......+|.+.|++-
T Consensus 235 y~~~~~~pl~llggh-~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 235 YNDDGRRPLQLLGGH-GGGVTHLQWCEDGNKLFSGARKDDKILCWDIRY 282 (406)
T ss_pred EecCCCCceeeeccc-CCCeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence 333444333333322 556777888999999999888888999998874
No 254
>KOG0276|consensus
Probab=61.05 E-value=1.3e+02 Score=27.18 Aligned_cols=136 Identities=10% Similarity=0.013 Sum_probs=87.6
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEEEeCCCCCceEEEEeCCCCeEE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVIVSKDLVNPRGIVVHPYYRKLF 102 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~iavd~~~~~ly 102 (232)
.|..++.+...+-+.+......++.|+++|..- .+.+.+..-.|-..+.++.. +...++.+-.....+++.|.+..-|
T Consensus 78 ~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P-~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntF 156 (794)
T KOG0276|consen 78 QIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLP-YVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTF 156 (794)
T ss_pred eEEEEecccceeeEEeeccccceeeeeecCCCC-eEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccce
Confidence 788888886665455555556889999999443 33455555567788998886 4567776666778999999888888
Q ss_pred EEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC-cEEEEecC
Q psy5751 103 WSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK-SLECMTIR 163 (232)
Q Consensus 103 ~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~~~~~ 163 (232)
.+..- ...|.+.++......--+.. +....|.+..-+.+++-|....... .|...|+.
T Consensus 157 aS~sL--DrTVKVWslgs~~~nfTl~g-HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ 215 (794)
T KOG0276|consen 157 ASASL--DRTVKVWSLGSPHPNFTLEG-HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ 215 (794)
T ss_pred eeeec--cccEEEEEcCCCCCceeeec-cccCcceEEeccCCCcceEEecCCCceEEEeecc
Confidence 77654 23355555544433322332 2567788877776666676654433 34444443
No 255
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=60.40 E-value=1.2e+02 Score=26.48 Aligned_cols=156 Identities=12% Similarity=-0.048 Sum_probs=74.3
Q ss_pred CCCEEEEEEc----CCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC
Q psy5751 10 VEGQVYYSSV----ADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD 85 (232)
Q Consensus 10 ~~~~ly~~d~----~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 85 (232)
..+.||+..- .. +..+.++.+|.-+..+......... +-.-. ++.+++... ..+..+|+.|+.....--..
T Consensus 112 ~~~gl~~~~~~~~~~~-~~~~~iD~~G~Vrw~~~~~~~~~~~-~~~l~-nG~ll~~~~--~~~~e~D~~G~v~~~~~l~~ 186 (477)
T PF05935_consen 112 MEDGLYFVNGNDWDSS-SYTYLIDNNGDVRWYLPLDSGSDNS-FKQLP-NGNLLIGSG--NRLYEIDLLGKVIWEYDLPG 186 (477)
T ss_dssp -TT-EEEEEETT--BE-EEEEEEETTS-EEEEE-GGGT--SS-EEE-T-TS-EEEEEB--TEEEEE-TT--EEEEEE--T
T ss_pred cCCcEEEEeCCCCCCC-ceEEEECCCccEEEEEccCccccce-eeEcC-CCCEEEecC--CceEEEcCCCCEEEeeecCC
Confidence 4556666655 22 2677888888665444332211111 33333 566776665 68888999887433311111
Q ss_pred --CCCceEEEEeCCCCeEEEEEc-------CCC----CCcEEEEeCCCCCcEEEEEcCCC--------------------
Q psy5751 86 --LVNPRGIVVHPYYRKLFWSDW-------NRS----GPKIEWSNLDGTDREIFLKAADL-------------------- 132 (232)
Q Consensus 86 --~~~p~~iavd~~~~~ly~~d~-------~~~----~~~I~~~~~~g~~~~~~~~~~~~-------------------- 132 (232)
...-.++...| +|.+.+... ... ...|..++.+|......-....+
T Consensus 187 ~~~~~HHD~~~l~-nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~ 265 (477)
T PF05935_consen 187 GYYDFHHDIDELP-NGNLLILASETKYVDEDKDVDTVEDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSG 265 (477)
T ss_dssp TEE-B-S-EEE-T-TS-EEEEEEETTEE-TS-EE---S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SS
T ss_pred cccccccccEECC-CCCEEEEEeecccccCCCCccEecCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCC
Confidence 11245777777 444444332 100 23455565444432222111101
Q ss_pred -----CCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEe
Q psy5751 133 -----KLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY 171 (232)
Q Consensus 133 -----~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~ 171 (232)
..-|++..|+.++.|.++-.+.+.|+.++.+.++..-++
T Consensus 266 ~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 266 GGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp TTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred CCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 234789999988999999999999999997766665443
No 256
>KOG0645|consensus
Probab=58.98 E-value=92 Score=24.89 Aligned_cols=182 Identities=10% Similarity=-0.028 Sum_probs=100.8
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC---CCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD---QPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~ 118 (232)
......+|..+..+.|+.+......|...+..+. .++.++. .+-...+.+|-.|.++.|-.+.... ...|+.- -
T Consensus 14 ~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~-t~~Iw~k-~ 91 (312)
T KOG0645|consen 14 KDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA-TVVIWKK-E 91 (312)
T ss_pred CCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc-eEEEeec-C
Confidence 3467889999865777778777788888887742 2444444 3445678999998666444443331 2223321 2
Q ss_pred CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE----ecCCCceEEEEEE-CCEEEEEeCC
Q psy5751 119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV----YSNCTYPFGLSIT-DEKYYWTDWK 193 (232)
Q Consensus 119 ~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~----~~~~~~p~gla~~-~~~ly~td~~ 193 (232)
++.-..+-..+..-...-+++++..++.|=-+ +....||....+..+.-.. .+..+....+.++ -.-|.++-..
T Consensus 92 ~~efecv~~lEGHEnEVK~Vaws~sG~~LATC-SRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SY 170 (312)
T KOG0645|consen 92 DGEFECVATLEGHENEVKCVAWSASGNYLATC-SRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSY 170 (312)
T ss_pred CCceeEEeeeeccccceeEEEEcCCCCEEEEe-eCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEecc
Confidence 22222222222224556789999986666444 5567787777774433222 2244555577775 2334444444
Q ss_pred CCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEc
Q psy5751 194 TNRIESANKE-GERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 194 ~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
.+.|.....+ +.....+..-....+-.+.+++.+
T Consensus 171 DnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~ 205 (312)
T KOG0645|consen 171 DNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN 205 (312)
T ss_pred CCeEEEEeecCCCCeeEEEEecCccceEEEEEecC
Confidence 5555555554 555443333333333456665554
No 257
>KOG0305|consensus
Probab=58.95 E-value=1.2e+02 Score=26.39 Aligned_cols=144 Identities=13% Similarity=-0.029 Sum_probs=85.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~ 80 (232)
-|+.|.+ ++..+.+-..++ .+...+.........+.........++..|-...|.-+-.+ ...|...+........
T Consensus 305 CgLkws~-d~~~lASGgnDN-~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~ 382 (484)
T KOG0305|consen 305 CGLKWSP-DGNQLASGGNDN-VVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARID 382 (484)
T ss_pred eeeEECC-CCCeeccCCCcc-ceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEec
Confidence 3677776 444444444555 78888886555444555556788888888777777666544 3566666766444332
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
.+. .......|+-.+..+.|-.+-.. ...+|.............+..- ....-.+++.|++..+..+.
T Consensus 383 ~vd-tgsQVcsL~Wsk~~kEi~sthG~-s~n~i~lw~~ps~~~~~~l~gH-~~RVl~la~SPdg~~i~t~a 450 (484)
T KOG0305|consen 383 SVD-TGSQVCSLIWSKKYKELLSTHGY-SENQITLWKYPSMKLVAELLGH-TSRVLYLALSPDGETIVTGA 450 (484)
T ss_pred ccc-cCCceeeEEEcCCCCEEEEecCC-CCCcEEEEeccccceeeeecCC-cceeEEEEECCCCCEEEEec
Confidence 222 45678889988877777666543 2445555555443333332221 33455677777766665553
No 258
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=58.66 E-value=22 Score=18.63 Aligned_cols=24 Identities=4% Similarity=0.091 Sum_probs=16.3
Q ss_pred EEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 179 GLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 179 gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
++++.++.||+... .+.++.++..
T Consensus 16 ~~~v~~g~vyv~~~-dg~l~ald~~ 39 (40)
T PF13570_consen 16 SPAVAGGRVYVGTG-DGNLYALDAA 39 (40)
T ss_dssp --EECTSEEEEE-T-TSEEEEEETT
T ss_pred CCEEECCEEEEEcC-CCEEEEEeCC
Confidence 34778889999887 4678877764
No 259
>KOG0278|consensus
Probab=58.63 E-value=90 Score=24.69 Aligned_cols=144 Identities=12% Similarity=0.054 Sum_probs=83.7
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+.|...++.+ .+...++ .|+..+.... ..+.+... ..+.++.+...++.|-.++. ..|...+.+.... +-
T Consensus 149 v~wc~eD~~i-LSSadd~-tVRLWD~rTgt~v~sL~~~--s~VtSlEvs~dG~ilTia~g--ssV~Fwdaksf~~--lK- 219 (334)
T KOG0278|consen 149 VLWCHEDKCI-LSSADDK-TVRLWDHRTGTEVQSLEFN--SPVTSLEVSQDGRILTIAYG--SSVKFWDAKSFGL--LK- 219 (334)
T ss_pred EEEeccCceE-EeeccCC-ceEEEEeccCcEEEEEecC--CCCcceeeccCCCEEEEecC--ceeEEeccccccc--ee-
Confidence 3455434443 3434444 6777776643 33333222 57788888886666555544 3566666655432 11
Q ss_pred CCCCCce---EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEE
Q psy5751 84 KDLVNPR---GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLE 158 (232)
Q Consensus 84 ~~~~~p~---~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~ 158 (232)
....|. +-.+.| +..+|++... ...+++++.+.................++.+.|+ |.+|-+-+..+ ++|
T Consensus 220 -s~k~P~nV~SASL~P-~k~~fVaGge--d~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPd-GE~yAsGSEDGTirlW 294 (334)
T KOG0278|consen 220 -SYKMPCNVESASLHP-KKEFFVAGGE--DFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPD-GELYASGSEDGTIRLW 294 (334)
T ss_pred -eccCccccccccccC-CCceEEecCc--ceEEEEEeccCCceeeecccCCCCceEEEEECCC-CceeeccCCCceEEEE
Confidence 222343 444777 5688888643 5678888888665554433332444568899997 89998766655 445
Q ss_pred EEec
Q psy5751 159 CMTI 162 (232)
Q Consensus 159 ~~~~ 162 (232)
++.+
T Consensus 295 Qt~~ 298 (334)
T KOG0278|consen 295 QTTP 298 (334)
T ss_pred EecC
Confidence 5433
No 260
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=57.55 E-value=30 Score=18.79 Aligned_cols=27 Identities=7% Similarity=0.080 Sum_probs=20.2
Q ss_pred ceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 176 YPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 176 ~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
...++++.++.+|++++..+ +..++-.
T Consensus 3 ~a~~v~v~g~yaYva~~~~G-l~IvDIS 29 (42)
T PF08309_consen 3 DARDVAVSGNYAYVADGNNG-LVIVDIS 29 (42)
T ss_pred eEEEEEEECCEEEEEeCCCC-EEEEECC
Confidence 35678889999999988755 5566643
No 261
>KOG1036|consensus
Probab=57.42 E-value=1e+02 Score=24.97 Aligned_cols=148 Identities=5% Similarity=0.029 Sum_probs=90.4
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
..+..|.+++.++.|.++. -.+.+..++......+..+. ...-....++.. ...+|.... .+.|.++++++...
T Consensus 14 d~IS~v~f~~~~~~LLvss-WDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~---dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSS-WDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGL---DGQVRRYDLNTGNE 87 (323)
T ss_pred hceeeEEEcCcCCcEEEEe-ccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEecc---CceEEEEEecCCcc
Confidence 4667788888778887666 55778888877765444333 112224555553 556776664 35699999999887
Q ss_pred EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEe
Q psy5751 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~ 201 (232)
..+... ...-.+|...+..+.+ ++-+-...|...++......-...+......+.+-+++|.+.-.+ .++...+
T Consensus 88 ~~igth--~~~i~ci~~~~~~~~v-IsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~-r~v~iyD 161 (323)
T KOG1036|consen 88 DQIGTH--DEGIRCIEYSYEVGCV-ISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSD-RKVLIYD 161 (323)
T ss_pred eeeccC--CCceEEEEeeccCCeE-EEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecC-ceEEEEE
Confidence 777665 3445677766654444 555567788888887522111133444555666667777774332 3344444
No 262
>KOG3621|consensus
Probab=56.07 E-value=1.6e+02 Score=26.82 Aligned_cols=186 Identities=10% Similarity=0.147 Sum_probs=85.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-----ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-----NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-----~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
..++.|+.+.-+||..|..+ +|.-..++.. ..++++... ..+ +-+|.....|.++... +=..++.+-.
T Consensus 127 VTal~Ws~~~~k~ysGD~~G--kv~~~~L~s~~~~~~~~q~il~~d-s~I--VQlD~~q~~LLVStl~--r~~Lc~tE~e 199 (726)
T KOG3621|consen 127 VTALEWSKNGMKLYSGDSQG--KVVLTELDSRQAFLSKSQEILSED-SEI--VQLDYLQSYLLVSTLT--RCILCQTEAE 199 (726)
T ss_pred EEEEEecccccEEeecCCCc--eEEEEEechhhhhccccceeeccC-cce--EEeecccceehHhhhh--hhheeecchh
Confidence 35889999999999888654 4665566541 122333221 111 4456555666555433 2223333322
Q ss_pred CCEEEEeCCCCC--ceEEEEeCC-----CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----------C---CCCcc
Q psy5751 77 QPKVIVSKDLVN--PRGIVVHPY-----YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----------D---LKLPN 136 (232)
Q Consensus 77 ~~~~~~~~~~~~--p~~iavd~~-----~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----------~---~~~p~ 136 (232)
....+....-.. +.|-++-|- .-+||.+- ++.++|.++.+|....+..-.+ . +..|+
T Consensus 200 ti~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaR---PG~RlWead~~G~V~~Thqfk~ala~~p~p~i~~~s~esp~ 276 (726)
T KOG3621|consen 200 TITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCAR---PGLRLWEADFAGEVIKTHQFKDALARPPAPEIPIRSLESPN 276 (726)
T ss_pred HHHHhcCCCcCCccccceEEeeccccCCCceEEEec---CCCceEEeecceeEEEeeehhhhhccCCCCcccCCCcCCcc
Confidence 222222211111 333333321 12444443 2455666666666443322110 0 01122
Q ss_pred eEEEeCCC--------------CEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEe
Q psy5751 137 SLAVDFRT--------------DELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 137 ~l~~d~~~--------------~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~ 201 (232)
.-..++.+ .-|-|++.+ |+.+++.........++......++..++-||+-.-.+ .+..+.
T Consensus 277 ~~~~~~~~q~ls~~k~~~l~~~~vLa~te~G---iyv~d~~~~~v~l~se~~~DI~dVs~~~neiFvL~~d~-~l~~~s 351 (726)
T KOG3621|consen 277 QRSLPSGTQHLSLSKSSTLHSDRVLAWTEVG---IYVFDSNNSQVYLWSEGGHDILDVSHCGNEIFVLNLDR-GLKVES 351 (726)
T ss_pred ccCCCCCccccccceeEEeecceEEEeecce---EEEEEeccceEEEeecCCCceeEEeecCceEEEEecCC-ceeEEE
Confidence 21111111 124555433 66666665444333445555566666677777766544 344333
No 263
>KOG2919|consensus
Probab=55.89 E-value=1.1e+02 Score=25.07 Aligned_cols=157 Identities=10% Similarity=0.058 Sum_probs=84.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCcee--EEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVE--DVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~--~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~ 73 (232)
++++.|.+....||...-. .|..+++. |..-. .++.. ...-...+++.+.....+-...-..++-.+.-
T Consensus 161 AhsL~Fs~DGeqlfaGykr---cirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~ 237 (406)
T KOG2919|consen 161 AHSLQFSPDGEQLFAGYKR---CIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYND 237 (406)
T ss_pred heeEEecCCCCeEeecccc---eEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEec
Confidence 5789999988899865543 66766663 43311 11111 12344567777766644444333345666666
Q ss_pred CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC---CcceEEEeCCCCEEEEE
Q psy5751 74 NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK---LPNSLAVDFRTDELCWV 150 (232)
Q Consensus 74 ~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~---~p~~l~~d~~~~~Ly~~ 150 (232)
++..+..++...-....-+...+.+++||.-.-. ..+|...++.-....+........ +=--+-+|+.+..| .+
T Consensus 238 ~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk--~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~L-as 314 (406)
T KOG2919|consen 238 DGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARK--DDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEIL-AS 314 (406)
T ss_pred CCCCceeeecccCCCeeeEEeccCcCeecccccC--CCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCcee-ec
Confidence 6666555554455566667788867766654422 567888877644322221111011 11122334443333 33
Q ss_pred ECCCCcEEEEecCC
Q psy5751 151 DADSKSLECMTIRN 164 (232)
Q Consensus 151 d~~~~~i~~~~~~g 164 (232)
-...+.|.+.++++
T Consensus 315 G~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 315 GDTDGSVRVWDLKD 328 (406)
T ss_pred cCCCccEEEEecCC
Confidence 33456777777775
No 264
>KOG2139|consensus
Probab=54.98 E-value=1.3e+02 Score=25.24 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=112.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++.+++....|.=+..++. .|...+.+......+...++....-|...+.+..||.+... .-..+.+........-.
T Consensus 199 tsmqwn~dgt~l~tAS~gss-si~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~d-avfrlw~e~q~wt~erw 276 (445)
T KOG2139|consen 199 TSMQWNEDGTILVTASFGSS-SIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCD-AVFRLWQENQSWTKERW 276 (445)
T ss_pred eEEEEcCCCCEEeecccCcc-eEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEeccc-ceeeeehhcccceecce
Confidence 36777775445544455555 78888888655444443444555556677767766655433 22223333333322111
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc---------EEEEEcC------------CCCCcceEEEe
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR---------EIFLKAA------------DLKLPNSLAVD 141 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~---------~~~~~~~------------~~~~p~~l~~d 141 (232)
.-.-.+..+-+-+|.+.+|.++-.+ ...+++...++... ++++..+ .-..+..|+.|
T Consensus 277 ~lgsgrvqtacWspcGsfLLf~~sg--sp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawD 354 (445)
T KOG2139|consen 277 ILGSGRVQTACWSPCGSFLLFACSG--SPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWD 354 (445)
T ss_pred eccCCceeeeeecCCCCEEEEEEcC--CceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeEC
Confidence 1112256677778878888888776 45688877665532 2222211 12356789999
Q ss_pred CCCCEEEEEECCCCc-------EEEEecCCCceEEE-ec---CCCceEEEEE----ECCEEEEEeCCCCcEEEEeCC
Q psy5751 142 FRTDELCWVDADSKS-------LECMTIRNRVRRKV-YS---NCTYPFGLSI----TDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 142 ~~~~~Ly~~d~~~~~-------i~~~~~~g~~~~~~-~~---~~~~p~gla~----~~~~ly~td~~~~~i~~~~~~ 203 (232)
+.+.+|-++--+... |.+++..-.-...+ .. +...|.-|.+ .++.|...-|.++++.++..+
T Consensus 355 psGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 355 PSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred CCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 999999887555443 33333332222222 11 3455765654 377888888999998887655
No 265
>KOG4649|consensus
Probab=52.93 E-value=1.2e+02 Score=24.29 Aligned_cols=132 Identities=14% Similarity=0.063 Sum_probs=70.4
Q ss_pred ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEE
Q psy5751 46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREI 125 (232)
Q Consensus 46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~ 125 (232)
-.=+++|+..+++||--.-..||.-.- .++. ++ +.+-..++.||+.+... ..+++.....++..
T Consensus 33 ~~~~avd~~sG~~~We~ilg~RiE~sa-------~vvg-df-----VV~GCy~g~lYfl~~~t-Gs~~w~f~~~~~vk-- 96 (354)
T KOG4649|consen 33 GIVIAVDPQSGNLIWEAILGVRIECSA-------IVVG-DF-----VVLGCYSGGLYFLCVKT-GSQIWNFVILETVK-- 96 (354)
T ss_pred ceEEEecCCCCcEEeehhhCceeeeee-------EEEC-CE-----EEEEEccCcEEEEEecc-hhheeeeeehhhhc--
Confidence 344788999999999765555554221 1221 22 66666789999988763 33666543332211
Q ss_pred EEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-CCCceEEEEE--ECCEEEEEeCCCCcEEEEeC
Q psy5751 126 FLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSI--TDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 126 ~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~--~~~~ly~td~~~~~i~~~~~ 202 (232)
.--..|++++. .|+-++++..+..|+.......-.+ ....-.+=++ -.+.||.+-.. +++.++++
T Consensus 97 ----------~~a~~d~~~gl-Iycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~-G~vlavt~ 164 (354)
T KOG4649|consen 97 ----------VRAQCDFDGGL-IYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITA-GAVLAVTK 164 (354)
T ss_pred ----------cceEEcCCCce-EEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEecc-ceEEEEcc
Confidence 11123455344 3455666777777666432211111 1111111123 25678888764 66777777
Q ss_pred CCC
Q psy5751 203 EGE 205 (232)
Q Consensus 203 ~g~ 205 (232)
...
T Consensus 165 ~~~ 167 (354)
T KOG4649|consen 165 NPY 167 (354)
T ss_pred CCC
Confidence 633
No 266
>KOG3914|consensus
Probab=52.60 E-value=1.4e+02 Score=25.07 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=87.8
Q ss_pred EEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEe--CCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEE
Q psy5751 6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVIT--TNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKV 80 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~ 80 (232)
.+......|++++.. + +...+...++.. .++.. .....|..+.+......+-++|... ..+...+.+-...+.
T Consensus 69 ~~s~~~~llAv~~~~-K-~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~ 146 (390)
T KOG3914|consen 69 LTSDSGRLVAVATSS-K-QRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEP 146 (390)
T ss_pred ccCCCceEEEEEeCC-C-ceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcch
Confidence 344434445555544 4 455555555442 12221 1235777777776666777777653 234444444222223
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
++ .++....++++.|....|..+|-. .+|+........ +..+.... -...+.+++-+ +++.++-++.+++..
T Consensus 147 ~l-GhvSml~dVavS~D~~~IitaDRD---EkIRvs~ypa~f~IesfclGH-~eFVS~isl~~--~~~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 147 IL-GHVSMLLDVAVSPDDQFIITADRD---EKIRVSRYPATFVIESFCLGH-KEFVSTISLTD--NYLLLSGSGDKTLRL 219 (390)
T ss_pred hh-hhhhhhheeeecCCCCEEEEecCC---ceEEEEecCcccchhhhcccc-Hhheeeeeecc--CceeeecCCCCcEEE
Confidence 33 367778899999988888888854 467777766543 22222211 34567777766 466778888888888
Q ss_pred EecCCC
Q psy5751 160 MTIRNR 165 (232)
Q Consensus 160 ~~~~g~ 165 (232)
.++..+
T Consensus 220 Wd~~sg 225 (390)
T KOG3914|consen 220 WDITSG 225 (390)
T ss_pred EecccC
Confidence 888643
No 267
>KOG0296|consensus
Probab=51.78 E-value=1.4e+02 Score=24.87 Aligned_cols=112 Identities=8% Similarity=-0.067 Sum_probs=66.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.+.|.. ++.+..+-...+ .|+....+.+.. .++. .......-|.-++. ..++.+....+.++...+..+....+
T Consensus 110 t~~~Fsh-dgtlLATGdmsG-~v~v~~~stg~~~~~~~-~e~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv 185 (399)
T KOG0296|consen 110 TCCSFSH-DGTLLATGDMSG-KVLVFKVSTGGEQWKLD-QEVEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKV 185 (399)
T ss_pred EEEEEcc-CceEEEecCCCc-cEEEEEcccCceEEEee-cccCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeE
Confidence 4566665 556555554555 677777764443 3333 44567778888884 45666777889999999888655555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
+..+......=.+.|.+++++.... .+.|...++...
T Consensus 186 ~~Gh~~~ct~G~f~pdGKr~~tgy~---dgti~~Wn~ktg 222 (399)
T KOG0296|consen 186 MSGHNSPCTCGEFIPDGKRILTGYD---DGTIIVWNPKTG 222 (399)
T ss_pred ecCCCCCcccccccCCCceEEEEec---CceEEEEecCCC
Confidence 5533322222335555666655543 345666665544
No 268
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=51.39 E-value=35 Score=17.71 Aligned_cols=26 Identities=8% Similarity=0.040 Sum_probs=14.3
Q ss_pred CEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751 185 EKYYWTDWKTNRIESANKE-GERAPSIA 211 (232)
Q Consensus 185 ~~ly~td~~~~~i~~~~~~-g~~~~~i~ 211 (232)
|.+|+. ...+.|+.++.. |+......
T Consensus 1 ~~v~~~-~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 1 GRVYVG-TPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp TEEEEE-TTTSEEEEEETTTTSEEEEEE
T ss_pred CEEEEe-CCCCEEEEEECCCCCEEEeee
Confidence 345665 555666666665 44444443
No 269
>KOG1272|consensus
Probab=49.79 E-value=75 Score=27.36 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=23.4
Q ss_pred CCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 133 KLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 133 ~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
...++|+||+. |+...|......+...|++...
T Consensus 294 g~V~siAv~~~-G~YMaTtG~Dr~~kIWDlR~~~ 326 (545)
T KOG1272|consen 294 GPVSSIAVDRG-GRYMATTGLDRKVKIWDLRNFY 326 (545)
T ss_pred CCcceEEECCC-CcEEeecccccceeEeeecccc
Confidence 45689999997 5555565666777788887654
No 270
>KOG2048|consensus
Probab=49.20 E-value=2.1e+02 Score=25.99 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=72.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.++++|...++.|-++...+ .|.-.++...... .+..+....+++|+.-+ +++|| +-..++.|.-.|+....+.
T Consensus 28 I~slA~s~kS~~lAvsRt~g--~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLF-S~g~sg~i~EwDl~~lk~~ 103 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTDG--NIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLF-SSGLSGSITEWDLHTLKQK 103 (691)
T ss_pred eEEEEEeccCCceeeeccCC--cEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEE-eecCCceEEEEecccCcee
Confidence 35889998888877766553 4777777754432 23334457889999885 78888 5556789999999888888
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWS 104 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~ 104 (232)
...+......+.|++.|.+..+-+.
T Consensus 104 ~~~d~~gg~IWsiai~p~~~~l~Ig 128 (691)
T KOG2048|consen 104 YNIDSNGGAIWSIAINPENTILAIG 128 (691)
T ss_pred EEecCCCcceeEEEeCCccceEEee
Confidence 8887677778899988876655554
No 271
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=48.96 E-value=2e+02 Score=25.84 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=49.1
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC---CEEEEeCCCCCceEEEEeCCCCeEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ---PKVIVSKDLVNPRGIVVHPYYRKLFWS 104 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~~~~~~p~~iavd~~~~~ly~~ 104 (232)
++..+++--|.=||+|+..+.+-++....+.|+++.+.-.. .+.+--++..+|.|+++-. ++.|...
T Consensus 332 KV~IPGILvPDliAfn~kaq~VAVASNTcn~ilVYSv~~s~mPniQqIqLe~~ERPKGiCFlt-dklLLil 401 (671)
T PF15390_consen 332 KVSIPGILVPDLIAFNPKAQVVAVASNTCNIILVYSVTPSSMPNIQQIQLESNERPKGICFLT-DKLLLIL 401 (671)
T ss_pred eeccccccccceeeeCCcCCEEEEEecCCcEEEEEEeccccCCCeeEEEcccCCCCceeeEcc-CCeEEEE
Confidence 44445667788899999999999999888999988765543 3333335788999999874 5555543
No 272
>KOG1036|consensus
Probab=48.82 E-value=1.5e+02 Score=24.16 Aligned_cols=197 Identities=11% Similarity=0.097 Sum_probs=110.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++.|++..+.|.++.+... +..++.........+... ......++-. ...+| +..-.+.|.++|+.+.....+.
T Consensus 17 S~v~f~~~~~~LLvssWDgs--lrlYdv~~~~l~~~~~~~-~plL~c~F~d-~~~~~-~G~~dg~vr~~Dln~~~~~~ig 91 (323)
T KOG1036|consen 17 SSVKFSPSSSDLLVSSWDGS--LRLYDVPANSLKLKFKHG-APLLDCAFAD-ESTIV-TGGLDGQVRRYDLNTGNEDQIG 91 (323)
T ss_pred eeEEEcCcCCcEEEEeccCc--EEEEeccchhhhhheecC-CceeeeeccC-CceEE-EeccCceEEEEEecCCcceeec
Confidence 36788888999999998754 666666554332223222 2345556654 34455 4445589999999988776666
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcc-eEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPN-SLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~-~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
. +....+.|...+..+.+.-..|++ +|...+... ...... +.++. --++|..+++|.+. ....+|...|
T Consensus 92 t-h~~~i~ci~~~~~~~~vIsgsWD~---~ik~wD~R~--~~~~~~---~d~~kkVy~~~v~g~~LvVg-~~~r~v~iyD 161 (323)
T KOG1036|consen 92 T-HDEGIRCIEYSYEVGCVISGSWDK---TIKFWDPRN--KVVVGT---FDQGKKVYCMDVSGNRLVVG-TSDRKVLIYD 161 (323)
T ss_pred c-CCCceEEEEeeccCCeEEEcccCc---cEEEEeccc--cccccc---cccCceEEEEeccCCEEEEe-ecCceEEEEE
Confidence 5 555567777777677776667763 466665553 111111 22232 23455556777764 2245566666
Q ss_pred cCCCceEEE--ecCCCc--------e--EEEEE--ECCEEEEEeCC-------CCcEEEEeCCCCCcceEEecc
Q psy5751 162 IRNRVRRKV--YSNCTY--------P--FGLSI--TDEKYYWTDWK-------TNRIESANKEGERAPSIALDM 214 (232)
Q Consensus 162 ~~g~~~~~~--~~~~~~--------p--~gla~--~~~~ly~td~~-------~~~i~~~~~~g~~~~~i~~~~ 214 (232)
++....... .+.+.. | .|.++ .+|++++=... .....++++.-+..+.+.+|.
T Consensus 162 LRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPV 235 (323)
T KOG1036|consen 162 LRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPV 235 (323)
T ss_pred cccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEe
Confidence 653321110 112211 2 35554 37777765332 235666666655666666665
No 273
>KOG0283|consensus
Probab=48.82 E-value=2.2e+02 Score=26.21 Aligned_cols=148 Identities=10% Similarity=0.029 Sum_probs=88.0
Q ss_pred EEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE
Q psy5751 49 LTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK 128 (232)
Q Consensus 49 l~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~ 128 (232)
|.+.|-.+....+-.....+....+....+--++. +.+-...+++.|.+++-|.+..- .+++...++-. .+++.-
T Consensus 373 LDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSL--D~KvRiWsI~d--~~Vv~W 447 (712)
T KOG0283|consen 373 LDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSL--DGKVRLWSISD--KKVVDW 447 (712)
T ss_pred eecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeeccc--ccceEEeecCc--CeeEee
Confidence 44556555555566666667667776666655554 44556789999998888887654 45566555542 333333
Q ss_pred cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE----ec-----CCCceEEEEEE---CCEEEEEeCCCCc
Q psy5751 129 AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV----YS-----NCTYPFGLSIT---DEKYYWTDWKTNR 196 (232)
Q Consensus 129 ~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~----~~-----~~~~p~gla~~---~~~ly~td~~~~~ 196 (232)
.+.-.-..++++.|+ |..-+.=+.+|...-.+..|.+.+.- .. ......|+.++ .+.|.||-..+ +
T Consensus 448 ~Dl~~lITAvcy~Pd-Gk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDS-r 525 (712)
T KOG0283|consen 448 NDLRDLITAVCYSPD-GKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDS-R 525 (712)
T ss_pred hhhhhhheeEEeccC-CceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCC-c
Confidence 332345678888887 44444445566555555665433211 11 22356788874 45688887654 4
Q ss_pred EEEEeCC
Q psy5751 197 IESANKE 203 (232)
Q Consensus 197 i~~~~~~ 203 (232)
|..++..
T Consensus 526 IRI~d~~ 532 (712)
T KOG0283|consen 526 IRIYDGR 532 (712)
T ss_pred eEEEecc
Confidence 7777763
No 274
>KOG0301|consensus
Probab=48.25 E-value=2.2e+02 Score=26.00 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=73.2
Q ss_pred CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751 85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g 164 (232)
+....+.++.-|.+ .|+|...- ..|+.. ..++..+++... .....||++=++++.| +-++.+.|...+++|
T Consensus 139 H~asVWAv~~l~e~--~~vTgsaD--KtIklW-k~~~~l~tf~gH--tD~VRgL~vl~~~~fl--ScsNDg~Ir~w~~~g 209 (745)
T KOG0301|consen 139 HTASVWAVASLPEN--TYVTGSAD--KTIKLW-KGGTLLKTFSGH--TDCVRGLAVLDDSHFL--SCSNDGSIRLWDLDG 209 (745)
T ss_pred cchheeeeeecCCC--cEEeccCc--ceeeec-cCCchhhhhccc--hhheeeeEEecCCCeE--eecCCceEEEEeccC
Confidence 44455677777633 78876541 123322 234444433322 4567889888765554 446678899999988
Q ss_pred CceEEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEEeCCCCCcceEEecc
Q psy5751 165 RVRRKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESANKEGERAPSIALDM 214 (232)
Q Consensus 165 ~~~~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~ 214 (232)
.-..........-++++. ..+.+.++-...+.+...+.+ +-...|.+|.
T Consensus 210 e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~-e~~q~I~lPt 259 (745)
T KOG0301|consen 210 EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD-ECVQVITLPT 259 (745)
T ss_pred ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-ceEEEEecCc
Confidence 766656555566677774 466777777766666555555 6666676654
No 275
>KOG0278|consensus
Probab=48.06 E-value=1.4e+02 Score=23.70 Aligned_cols=125 Identities=7% Similarity=-0.037 Sum_probs=68.4
Q ss_pred CCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751 63 SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 63 ~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~ 142 (232)
...+.|...|.........+. -...+.++.+.+.+..|-.++.. .|.-.+...- ..+-+...-.+...-++.|
T Consensus 162 add~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gs----sV~Fwdaksf--~~lKs~k~P~nV~SASL~P 234 (334)
T KOG0278|consen 162 ADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGS----SVKFWDAKSF--GLLKSYKMPCNVESASLHP 234 (334)
T ss_pred ccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCc----eeEEeccccc--cceeeccCccccccccccC
Confidence 444556666543333222222 22356889999855544444422 2544444322 2332222112344567788
Q ss_pred CCCEEEEEECCCCcEEEEecCCCceEEE-ecCCCce-EEEEEE-CCEEEEEeCCCC
Q psy5751 143 RTDELCWVDADSKSLECMTIRNRVRRKV-YSNCTYP-FGLSIT-DEKYYWTDWKTN 195 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-~~~~~~p-~gla~~-~~~ly~td~~~~ 195 (232)
. ...|++-.....++++|++.+..... ..+-..| ..+.+. +|-+|-+-+..+
T Consensus 235 ~-k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDG 289 (334)
T KOG0278|consen 235 K-KEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDG 289 (334)
T ss_pred C-CceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCc
Confidence 6 58899987788999999997654433 2443344 355553 666776655444
No 276
>PF14517 Tachylectin: Tachylectin; PDB: 1TL2_A.
Probab=46.78 E-value=1.4e+02 Score=23.24 Aligned_cols=107 Identities=15% Similarity=0.058 Sum_probs=59.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-------eeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEE-eCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN-------VEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMA-NLN 74 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-------~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~-~~~ 74 (232)
.|.+++ ++.||-... +. .|+|....... ..+.+ ..+-+....|-.++ .+.||..+.. +++++. ..+
T Consensus 85 ~i~~d~-~G~LYaV~~-~G-~lyR~~~~~~~~~~W~~~~~~~iG~~GW~~f~~vfa~~-~GvLY~i~~d-g~~~~~~~p~ 159 (229)
T PF14517_consen 85 FIFFDP-TGVLYAVTP-DG-KLYRHPRPTNGSDNWIGGSGKKIGGTGWNDFDAVFAGP-NGVLYAITPD-GRLYRRYRPD 159 (229)
T ss_dssp EEEE-T-TS-EEEEET-T--EEEEES---STT--HHH-HSEEEE-SSGGGEEEEEE-T-TS-EEEEETT-E-EEEE---S
T ss_pred EEEecC-CccEEEecc-cc-ceeeccCCCccCcchhhccceecccCCCccceEEEeCC-CccEEEEcCC-CceEEeCCCC
Confidence 366776 888886665 34 68887765321 12344 56666677777787 7889988854 467666 444
Q ss_pred CCC------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 75 DDQ------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 75 g~~------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
+.. ...+.......+..|...| ++.||+.+. .++++|....
T Consensus 160 ~~~~~W~~~s~~v~~~gw~~~~~i~~~~-~g~L~~V~~---~G~lyr~~~p 206 (229)
T PF14517_consen 160 GGSDRWLSGSGLVGGGGWDSFHFIFFSP-DGNLWAVKS---NGKLYRGRPP 206 (229)
T ss_dssp STT--HHHH-EEEESSSGGGEEEEEE-T-TS-EEEE-E---TTEEEEES--
T ss_pred CCCCccccccceeccCCcccceEEeeCC-CCcEEEEec---CCEEeccCCc
Confidence 433 2333335666688888887 899999964 5678876543
No 277
>KOG1645|consensus
Probab=46.63 E-value=1.1e+02 Score=26.01 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=42.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~ 76 (232)
+++|.+.++.|...--.++ .|..+++........... -+.+++.+.|... +.|| +.-.++.|+++|+...
T Consensus 198 dlafSp~~~GLl~~asl~n-kiki~dlet~~~vssy~a-~~~~wSC~wDlde~h~IY-aGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 198 DLAFSPFNEGLLGLASLGN-KIKIMDLETSCVVSSYIA-YNQIWSCCWDLDERHVIY-AGLQNGMVLVYDMRQP 268 (463)
T ss_pred hhccCccccceeeeeccCc-eEEEEecccceeeeheec-cCCceeeeeccCCcceeE-EeccCceEEEEEccCC
Confidence 4566665554433333445 688888876543211111 2678888887544 4566 5556689999998654
No 278
>PHA02790 Kelch-like protein; Provisional
Probab=46.58 E-value=2e+02 Score=25.03 Aligned_cols=184 Identities=14% Similarity=0.051 Sum_probs=91.5
Q ss_pred CCEEEEEEcCCC----CcEEEEEcCCCceeEEEeCCCCCcc-EEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEe
Q psy5751 11 EGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPE-GLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 11 ~~~ly~~d~~~~----~~i~~~~~~g~~~~~~~~~~~~~p~-gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~ 83 (232)
++.||+.--.++ ..+.+++........+ . .+..|. ..+.-..++.||+.... ...+.+++.....=..+
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~-~-~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~-- 346 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPI-P-PMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNM-- 346 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEEC-C-CCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEEC--
Confidence 467777643211 1466677665443222 2 222222 12222236899988653 24566776543211111
Q ss_pred CCCCCce---EEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcc-eEEEeCCCCEEEEEECCCCcEE
Q psy5751 84 KDLVNPR---GIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPN-SLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 84 ~~~~~p~---~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~-~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
..+..|+ +.++. +|.||+.-.... ...+.+.+.....=+. ... +..|. +.+.-..+++||+.- +.+.
T Consensus 347 ~~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~W~~-~~~--m~~~r~~~~~~~~~~~IYv~G---G~~e 418 (480)
T PHA02790 347 PSLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHDQWQF-GPS--TYYPHYKSCALVFGRRLFLVG---RNAE 418 (480)
T ss_pred CCCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCCEEEe-CCC--CCCccccceEEEECCEEEEEC---CceE
Confidence 2344343 33444 799999854211 2345666655332111 111 22221 111222348999883 4577
Q ss_pred EEecCCCceEEEecCCCce---EEEEEECCEEEEEeCCC-----CcEEEEeCCCCCc
Q psy5751 159 CMTIRNRVRRKVYSNCTYP---FGLSITDEKYYWTDWKT-----NRIESANKEGERA 207 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p---~gla~~~~~ly~td~~~-----~~i~~~~~~g~~~ 207 (232)
+.+++...=+.+. .+..| .|+++.+|+||+.-..+ ..+.++++....+
T Consensus 419 ~ydp~~~~W~~~~-~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~W 474 (480)
T PHA02790 419 FYCESSNTWTLID-DPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTYSW 474 (480)
T ss_pred EecCCCCcEeEcC-CCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCCeE
Confidence 7777754434333 33333 37788899999985432 3455555554433
No 279
>PRK10115 protease 2; Provisional
Probab=46.36 E-value=2.4e+02 Score=25.94 Aligned_cols=160 Identities=10% Similarity=0.067 Sum_probs=83.5
Q ss_pred EEEEeCCCCEEEEEEcCCC----CcEEEEEcCCC--ceeEEEeCCCCCccEE--EEeecCCeEEEEe--CCCCeEEEEeC
Q psy5751 4 GITVDCVEGQVYYSSVADK----SSIKRAHLDGK--NVEDVITTNIRSPEGL--TFDWVNRVLYWTD--SQMDTISMANL 73 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~----~~i~~~~~~g~--~~~~~~~~~~~~p~gl--~~d~~~~~ly~~d--~~~~~I~~~~~ 73 (232)
+++|...++.||++-.... ..|++.++... ....+.... ..+..+ .....++.+.+.- ..++.+..++.
T Consensus 176 ~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~-~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 176 SFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEK-DDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred EEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeC-CCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 5778777778887743211 27888888865 333444432 222322 2222344444332 22346666663
Q ss_pred ---CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEE-cCCCCCcEEEEeCCCC-CcEEEEEcCCCCCcceEEEeCCCCEEE
Q psy5751 74 ---NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSD-WNRSGPKIEWSNLDGT-DREIFLKAADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 74 ---~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d-~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~p~~l~~d~~~~~Ly 148 (232)
++. ...+............ + ..+.+|+.. .+....+|.++++... .-+.++....-....++.+. .+.|+
T Consensus 255 ~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~ 329 (686)
T PRK10115 255 ELADAE-PFVFLPRRKDHEYSLD-H-YQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLV 329 (686)
T ss_pred cCCCCC-ceEEEECCCCCEEEEE-e-CCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEE
Confidence 333 2333332222223333 3 356777654 4556778888888743 33444443212345567776 46777
Q ss_pred EEECC--CCcEEEEecCCCceEE
Q psy5751 149 WVDAD--SKSLECMTIRNRVRRK 169 (232)
Q Consensus 149 ~~d~~--~~~i~~~~~~g~~~~~ 169 (232)
++... ..++..++.++.....
T Consensus 330 ~~~~~~g~~~l~~~~~~~~~~~~ 352 (686)
T PRK10115 330 VEERQRGLTSLRQINRKTREVIG 352 (686)
T ss_pred EEEEeCCEEEEEEEcCCCCceEE
Confidence 76543 4467777776554443
No 280
>KOG0290|consensus
Probab=46.29 E-value=1.6e+02 Score=23.91 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=51.4
Q ss_pred EEEEeCCCCEEEEEEcCCC-CcEEEEEcC--CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADK-SSIKRAHLD--GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~--g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
+++|+..+-.+..+..-+. =.|+-+... |.-...++.. -+....|++-..+..+|.+-...|.+...|+......+
T Consensus 155 SFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAH-DKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHST 233 (364)
T KOG0290|consen 155 SFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAH-DKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHST 233 (364)
T ss_pred ccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEec-CcceeEEEeccCccceEEEecCCCcEEEEEecccccce
Confidence 4555554444444433222 123333332 2223344444 47899999988778999988889999999999888877
Q ss_pred EEeCC
Q psy5751 81 IVSKD 85 (232)
Q Consensus 81 ~~~~~ 85 (232)
++.+.
T Consensus 234 IIYE~ 238 (364)
T KOG0290|consen 234 IIYED 238 (364)
T ss_pred EEecC
Confidence 77633
No 281
>KOG1034|consensus
Probab=46.28 E-value=1.7e+02 Score=24.17 Aligned_cols=112 Identities=9% Similarity=0.004 Sum_probs=68.8
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS- 83 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~- 83 (232)
=.||..++..|.+-.+..+.|+.+++......+-+...-..++.|...+.+-.|..+-+..+.|...+.....+..++.
T Consensus 97 w~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG 176 (385)
T KOG1034|consen 97 WSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGG 176 (385)
T ss_pred EEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecc
Confidence 3456555555555544434677777775443333333336778888888777788888888899999998887777765
Q ss_pred --CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 84 --KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 84 --~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
.+-....++-++.... |++..+. ..+|+..+++
T Consensus 177 ~egHrdeVLSvD~~~~gd--~i~ScGm-Dhslk~W~l~ 211 (385)
T KOG1034|consen 177 VEGHRDEVLSVDFSLDGD--RIASCGM-DHSLKLWRLN 211 (385)
T ss_pred cccccCcEEEEEEcCCCC--eeeccCC-cceEEEEecC
Confidence 2333444555554333 5655554 3455555554
No 282
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=46.26 E-value=2.7e+02 Score=26.50 Aligned_cols=94 Identities=10% Similarity=0.103 Sum_probs=56.5
Q ss_pred CCeEEEEEcCCCCCcEEEEeCCCCCcEEE-EEcCCCCCcceEEEeCCCCEEEEEEC-----CCCcEEEEecCCC--ceEE
Q psy5751 98 YRKLFWSDWNRSGPKIEWSNLDGTDREIF-LKAADLKLPNSLAVDFRTDELCWVDA-----DSKSLECMTIRNR--VRRK 169 (232)
Q Consensus 98 ~~~ly~~d~~~~~~~I~~~~~~g~~~~~~-~~~~~~~~p~~l~~d~~~~~Ly~~d~-----~~~~i~~~~~~g~--~~~~ 169 (232)
.+..|+.+.. ++|..++.+|.+.+++ +... .....-+++|++++|=++-+ +...|++-+++.. +..+
T Consensus 319 tkiAfv~~~~---~~L~~~D~dG~n~~~ve~~~~--~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vk 393 (912)
T TIGR02171 319 AKLAFRNDVT---GNLAYIDYTKGASRAVEIEDT--ISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVK 393 (912)
T ss_pred eeEEEEEcCC---CeEEEEecCCCCceEEEecCC--CceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceE
Confidence 5677777743 3799999999888876 4432 11223457788788766322 2446888888743 3222
Q ss_pred E-ecCCCceEEEEEE-CC--EEEEEeCCCCc
Q psy5751 170 V-YSNCTYPFGLSIT-DE--KYYWTDWKTNR 196 (232)
Q Consensus 170 ~-~~~~~~p~gla~~-~~--~ly~td~~~~~ 196 (232)
+ ++....|.==.+. ++ -+|||+.+++.
T Consensus 394 l~ve~aaiprwrv~e~gdt~ivyv~~a~nn~ 424 (912)
T TIGR02171 394 LPVENAAIPRWRVLENGDTVIVYVSDASNNK 424 (912)
T ss_pred eecccccccceEecCCCCeEEEEEcCCCCCc
Confidence 3 5555555422233 22 48999988774
No 283
>KOG0322|consensus
Probab=46.17 E-value=1.1e+02 Score=24.43 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=43.1
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL 101 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l 101 (232)
.....|+.+.+ .++|+-+-.-.+||.+++.....+-.++.-+-+..+.+|+.|..+.|
T Consensus 251 npGv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lm 308 (323)
T KOG0322|consen 251 NPGVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELM 308 (323)
T ss_pred CCCccceEEcc-CCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchh
Confidence 35778999988 56677777778999999988777666665455788899999843433
No 284
>KOG2106|consensus
Probab=46.11 E-value=2.1e+02 Score=25.17 Aligned_cols=119 Identities=9% Similarity=0.015 Sum_probs=67.7
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
...++-++=. .+.||+-.. ++.|.+-+++..-..+.... ...--|++..+. +.+|.+-.....+...+ ..
T Consensus 329 ~G~iRtv~e~--~~di~vGTt---rN~iL~Gt~~~~f~~~v~gh--~delwgla~hps-~~q~~T~gqdk~v~lW~--~~ 398 (626)
T KOG2106|consen 329 FGPIRTVAEG--KGDILVGTT---RNFILQGTLENGFTLTVQGH--GDELWGLATHPS-KNQLLTCGQDKHVRLWN--DH 398 (626)
T ss_pred cCCeeEEecC--CCcEEEeec---cceEEEeeecCCceEEEEec--ccceeeEEcCCC-hhheeeccCcceEEEcc--CC
Confidence 3344444433 555777653 34477766665543333332 236678999997 56667766555444443 11
Q ss_pred ce---EEEe----cCCCceEEEE-E--ECCEEEEEeCCCCcEEEEeCCCCCcceEEecc
Q psy5751 166 VR---RKVY----SNCTYPFGLS-I--TDEKYYWTDWKTNRIESANKEGERAPSIALDM 214 (232)
Q Consensus 166 ~~---~~~~----~~~~~p~gla-~--~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~ 214 (232)
+. +.+. ...-+|.|+. + ..|+.++-|..+..+..++.+++++..+++..
T Consensus 399 k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp 457 (626)
T KOG2106|consen 399 KLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSP 457 (626)
T ss_pred ceeEEEEecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCceEEEEEcC
Confidence 11 1111 1234455533 2 47888888887777777888888877777644
No 285
>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to Hyalin (IPR003410 from INTERPRO) and the PKD domain (IPR000601 from INTERPRO) suggest an Ig-like fold so this family may be similar in function to the (IPR003791 from INTERPRO) and (IPR003790 from INTERPRO) protein families.
Probab=45.20 E-value=29 Score=19.49 Aligned_cols=23 Identities=26% Similarity=0.277 Sum_probs=19.1
Q ss_pred CCCcceEEEeCCCCEEEEEECCC
Q psy5751 132 LKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 132 ~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
-.-|.||.||+..+.|-++-...
T Consensus 10 ~~LP~gLs~d~~tG~isGtp~~~ 32 (49)
T PF05345_consen 10 GGLPSGLSLDPSTGTISGTPTSS 32 (49)
T ss_pred CCCCCcEEEeCCCCEEEeecCCC
Confidence 46799999999999999885443
No 286
>KOG0641|consensus
Probab=44.61 E-value=1.5e+02 Score=23.05 Aligned_cols=114 Identities=15% Similarity=0.099 Sum_probs=64.0
Q ss_pred EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 92 IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 92 iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
+++-..++.+|.+... .-.|...++.-......+.+. +......+++||. ++|..+-.....-+..+++|+
T Consensus 187 lalyswn~~m~~sgsq--dktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdps-grll~sg~~dssc~lydirg~ 263 (350)
T KOG0641|consen 187 LALYSWNGAMFASGSQ--DKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS-GRLLASGHADSSCMLYDIRGG 263 (350)
T ss_pred EEEEEecCcEEEccCC--CceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCC-cceeeeccCCCceEEEEeeCC
Confidence 4455557888777643 223444444322211112111 1234568899997 888888776777888888887
Q ss_pred ce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 166 VR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 166 ~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
.. +.+.........+.+. ..+...|-...+.|..-+.+|..-+
T Consensus 264 r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~ 308 (350)
T KOG0641|consen 264 RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH 308 (350)
T ss_pred ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh
Confidence 54 2333333334455553 4445555666677776666665433
No 287
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=43.23 E-value=2.9e+02 Score=25.98 Aligned_cols=144 Identities=10% Similarity=-0.030 Sum_probs=0.0
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeec-----CCeEEEEeCCCCeEEEEeCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWV-----NRVLYWTDSQMDTISMANLN 74 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~-----~~~ly~~d~~~~~I~~~~~~ 74 (232)
.|.-+-.+..+..+.+.|-.+...|+++++. |.-+++.-.........++=+.. ....| .....++++++|+.
T Consensus 482 ~P~k~mL~~~d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tf-lGls~n~lfriDpR 560 (794)
T PF08553_consen 482 TPKKAMLHDQDRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTF-LGLSDNSLFRIDPR 560 (794)
T ss_pred CcchhhhhccccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceE-EEECCCceEEeccC
Q ss_pred CCCCEEEEe-----CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751 75 DDQPKVIVS-----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCW 149 (232)
Q Consensus 75 g~~~~~~~~-----~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~ 149 (232)
-...+.+.. .....-..+|... +|+|-+.. ..+.|..++--|....+.+... .....||.+..++.+|.-
T Consensus 561 ~~~~k~v~~~~k~Y~~~~~Fs~~aTt~-~G~iavgs---~~G~IRLyd~~g~~AKT~lp~l-G~pI~~iDvt~DGkwila 635 (794)
T PF08553_consen 561 LSGNKLVDSQSKQYSSKNNFSCFATTE-DGYIAVGS---NKGDIRLYDRLGKRAKTALPGL-GDPIIGIDVTADGKWILA 635 (794)
T ss_pred CCCCceeeccccccccCCCceEEEecC-CceEEEEe---CCCcEEeecccchhhhhcCCCC-CCCeeEEEecCCCcEEEE
Q ss_pred E
Q psy5751 150 V 150 (232)
Q Consensus 150 ~ 150 (232)
|
T Consensus 636 T 636 (794)
T PF08553_consen 636 T 636 (794)
T ss_pred e
No 288
>KOG3567|consensus
Probab=42.91 E-value=59 Score=27.95 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=32.9
Q ss_pred CCcEEEEecCCCceEEE--ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCC
Q psy5751 154 SKSLECMTIRNRVRRKV--YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~--~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~ 205 (232)
..+|.+++++...+... ..++..|.||.+| +|..|+||..++.+....+.++
T Consensus 444 ~~~ilvi~~~n~~~l~~~g~~~fylphgl~~dkdgf~~~tdvash~v~k~k~~~~ 498 (501)
T KOG3567|consen 444 EDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGFYWVTDVASHQVFKLKPNNK 498 (501)
T ss_pred cceEEEEcCcchhhhhhccCCceecCCcceecCCCcEEeecccchhhhhcccccc
Confidence 34566666662211111 1156779999998 7788888988888766655543
No 289
>KOG2106|consensus
Probab=42.68 E-value=2.4e+02 Score=24.85 Aligned_cols=131 Identities=11% Similarity=0.001 Sum_probs=67.7
Q ss_pred EEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCc-eEEEEeCCCCeEEE
Q psy5751 25 IKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNP-RGIVVHPYYRKLFW 103 (232)
Q Consensus 25 i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p-~~iavd~~~~~ly~ 103 (232)
|..-.++.... .++...-.+-.|++..+ .+.+|.+....+.+...+ ..+.........| ....++| .|.+-.
T Consensus 351 iL~Gt~~~~f~-~~v~gh~delwgla~hp-s~~q~~T~gqdk~v~lW~----~~k~~wt~~~~d~~~~~~fhp-sg~va~ 423 (626)
T KOG2106|consen 351 ILQGTLENGFT-LTVQGHGDELWGLATHP-SKNQLLTCGQDKHVRLWN----DHKLEWTKIIEDPAECADFHP-SGVVAV 423 (626)
T ss_pred EEEeeecCCce-EEEEecccceeeEEcCC-ChhheeeccCcceEEEcc----CCceeEEEEecCceeEeeccC-cceEEE
Confidence 55555554332 22222234788999998 667888887777777666 2223333223333 3455666 343322
Q ss_pred EEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc--EEEEecCCCceE
Q psy5751 104 SDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS--LECMTIRNRVRR 168 (232)
Q Consensus 104 ~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~--i~~~~~~g~~~~ 168 (232)
-. ..++...++.+......+ ..+ -.+-+.+.+.+++..|=+. ++++. |++++-+|.+..
T Consensus 424 Gt---~~G~w~V~d~e~~~lv~~-~~d-~~~ls~v~ysp~G~~lAvg-s~d~~iyiy~Vs~~g~~y~ 484 (626)
T KOG2106|consen 424 GT---ATGRWFVLDTETQDLVTI-HTD-NEQLSVVRYSPDGAFLAVG-SHDNHIYIYRVSANGRKYS 484 (626)
T ss_pred ee---ccceEEEEecccceeEEE-Eec-CCceEEEEEcCCCCEEEEe-cCCCeEEEEEECCCCcEEE
Confidence 22 134556666554322222 222 4456777788875555444 34444 455555554433
No 290
>KOG1445|consensus
Probab=42.66 E-value=2.7e+02 Score=25.42 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=67.3
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceE-----EEEeCCC
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRG-----IVVHPYY 98 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~-----iavd~~~ 98 (232)
.|...++.......-+...-..+.++|..+.++.+- +-...++|++++.......+- + ...|.| |.....+
T Consensus 701 Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~A-tVcKDg~~rVy~Prs~e~pv~-E--g~gpvgtRgARi~wacdg 776 (1012)
T KOG1445|consen 701 TIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIA-TVCKDGTLRVYEPRSREQPVY-E--GKGPVGTRGARILWACDG 776 (1012)
T ss_pred eeeeeehhhhhhhheeccCcCceeEEEECCCCccee-eeecCceEEEeCCCCCCCccc-c--CCCCccCcceeEEEEecC
Confidence 455555553322122223346788899888766654 555668888887755432221 1 122322 2211113
Q ss_pred CeEEEEEcCC-CCCcEEEEe---CCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 99 RKLFWSDWNR-SGPKIEWSN---LDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 99 ~~ly~~d~~~-~~~~I~~~~---~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
+.+.++.... ...+|..++ +++....+....- ...|---..|++++.||++--+...|.++.+--..
T Consensus 777 r~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDv-aps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~es 847 (1012)
T KOG1445|consen 777 RIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDV-APSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYES 847 (1012)
T ss_pred cEEEEecccccchhhhhhhhhhhccCCcceeeeecc-cCccccccccCCCceEEEecCCCceEEEEEecCCC
Confidence 3333332211 122333332 2222222222211 12222224578889999998788888887765443
No 291
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=42.08 E-value=82 Score=22.19 Aligned_cols=53 Identities=13% Similarity=0.161 Sum_probs=29.4
Q ss_pred CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--CEEEEe-CCCCCceEEEEeCC
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ--PKVIVS-KDLVNPRGIVVHPY 97 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~~~~-~~~~~p~~iavd~~ 97 (232)
++.=.-+|...+.||.+..+.+.|..+.+.... ...+.. .......|+++-|.
T Consensus 12 g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lPK 67 (136)
T PF08954_consen 12 GVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLPK 67 (136)
T ss_dssp S-EEEEE-TTT-EEEEEETT-S-EEEEEE-SSTTSEEEEEEE--SS--SEEEE--G
T ss_pred ceeEeeEcCCCCEEEEEeccCcEEEEEEEcCCCCceEEccccccCCCeEeeEecCc
Confidence 344445788999999999999999999887763 333333 23333478998873
No 292
>KOG0265|consensus
Probab=41.56 E-value=1.9e+02 Score=23.50 Aligned_cols=112 Identities=9% Similarity=-0.038 Sum_probs=58.5
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
-+.|++ ++..|.+.-.+. .|+-.+..|--...-... .-..+-++..-..++.|| +-....++...|+....+..-+
T Consensus 52 ~~~F~P-~gs~~aSgG~Dr-~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~-S~gtDk~v~~wD~~tG~~~rk~ 128 (338)
T KOG0265|consen 52 TIKFHP-DGSCFASGGSDR-AIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHIL-SCGTDKTVRGWDAETGKRIRKH 128 (338)
T ss_pred EEEECC-CCCeEeecCCcc-eEEEEeccccccceeeeccccceeEeeeeccCCCEEE-EecCCceEEEEecccceeeehh
Confidence 467888 888888777777 788877766432111111 113444454444455555 5555577888887766543333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
.....-.+.+.....+-.|..+ +.+.+++...++..
T Consensus 129 k~h~~~vNs~~p~rrg~~lv~S--gsdD~t~kl~D~R~ 164 (338)
T KOG0265|consen 129 KGHTSFVNSLDPSRRGPQLVCS--GSDDGTLKLWDIRK 164 (338)
T ss_pred ccccceeeecCccccCCeEEEe--cCCCceEEEEeecc
Confidence 3233333344433212222222 22355566666553
No 293
>KOG3567|consensus
Probab=41.49 E-value=68 Score=27.58 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=28.0
Q ss_pred CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 131 DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 131 ~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
.+.-|.||.+|.+ |..|++|...+.+....+.+.
T Consensus 465 ~fylphgl~~dkd-gf~~~tdvash~v~k~k~~~~ 498 (501)
T KOG3567|consen 465 LFYLPHGLSIDKD-GFYWVTDVASHQVFKLKPNNK 498 (501)
T ss_pred ceecCCcceecCC-CcEEeecccchhhhhcccccc
Confidence 3678999999997 899999988888887776654
No 294
>KOG0288|consensus
Probab=41.17 E-value=2.3e+02 Score=24.18 Aligned_cols=134 Identities=13% Similarity=0.027 Sum_probs=78.8
Q ss_pred CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-C---CCC
Q psy5751 12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-K---DLV 87 (232)
Q Consensus 12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~---~~~ 87 (232)
...+.++..++ +|.-++..+......+ +......++.+...+..|- +....+.+-+.++.+..+...+. . ...
T Consensus 312 ~~~~~SgH~Dk-kvRfwD~Rs~~~~~sv-~~gg~vtSl~ls~~g~~lL-sssRDdtl~viDlRt~eI~~~~sA~g~k~as 388 (459)
T KOG0288|consen 312 ISDVISGHFDK-KVRFWDIRSADKTRSV-PLGGRVTSLDLSMDGLELL-SSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS 388 (459)
T ss_pred ceeeeeccccc-ceEEEeccCCceeeEe-ecCcceeeEeeccCCeEEe-eecCCCceeeeecccccEEEEeecccccccc
Confidence 44455555556 6666666654432222 2223566666665455554 33555678888888877666555 2 223
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC-CcceEEEeCCCCEEEEEE
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK-LPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~-~p~~l~~d~~~~~Ly~~d 151 (232)
+-....++|.+. |++.... .+.|+..+..++..+..+....-. ....+++++.+..|.-++
T Consensus 389 DwtrvvfSpd~~--YvaAGS~-dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsad 450 (459)
T KOG0288|consen 389 DWTRVVFSPDGS--YVAAGSA-DGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSAD 450 (459)
T ss_pred ccceeEECCCCc--eeeeccC-CCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhccc
Confidence 345566777444 5555442 678999999999888777654111 346777777655554443
No 295
>KOG4283|consensus
Probab=40.84 E-value=2e+02 Score=23.45 Aligned_cols=154 Identities=13% Similarity=0.076 Sum_probs=89.3
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---eeEEEe-------C--CC---CCccEEEEeecCCeEEEEeCCCCeE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN---VEDVIT-------T--NI---RSPEGLTFDWVNRVLYWTDSQMDTI 68 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---~~~~~~-------~--~~---~~p~gl~~d~~~~~ly~~d~~~~~I 68 (232)
++++|..++++.++-..++ .|..++++... .+-++. . .. ..+..+.-.+...-+|.+.+..+.+
T Consensus 48 sL~id~tegrymlSGgadg-si~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtl 126 (397)
T KOG4283|consen 48 SLQIDLTEGRYMLSGGADG-SIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTL 126 (397)
T ss_pred eeeeccccceEEeecCCCc-cEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceE
Confidence 6788888888888877777 89999987532 111111 1 01 1233344455556677777777788
Q ss_pred EEEeCCCCCCEEEEe-CCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCC
Q psy5751 69 SMANLNDDQPKVIVS-KDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTD 145 (232)
Q Consensus 69 ~~~~~~g~~~~~~~~-~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~ 145 (232)
-+.|.+..+....+. +.. ...=+..|. ...|.-+.. ...+|...++......-.++.- -...-.+...+.++
T Consensus 127 KVWDtnTlQ~a~~F~me~~--VYshamSp~a~sHcLiA~gt--r~~~VrLCDi~SGs~sH~LsGH-r~~vlaV~Wsp~~e 201 (397)
T KOG4283|consen 127 KVWDTNTLQEAVDFKMEGK--VYSHAMSPMAMSHCLIAAGT--RDVQVRLCDIASGSFSHTLSGH-RDGVLAVEWSPSSE 201 (397)
T ss_pred EEeecccceeeEEeecCce--eehhhcChhhhcceEEEEec--CCCcEEEEeccCCcceeeeccc-cCceEEEEeccCce
Confidence 888877766555443 111 111111111 123333322 2567888888777665555543 45566777788888
Q ss_pred EEEEEECCCCcEEEEecC
Q psy5751 146 ELCWVDADSKSLECMTIR 163 (232)
Q Consensus 146 ~Ly~~d~~~~~i~~~~~~ 163 (232)
++..+-+..+.|.-.|++
T Consensus 202 ~vLatgsaDg~irlWDiR 219 (397)
T KOG4283|consen 202 WVLATGSADGAIRLWDIR 219 (397)
T ss_pred eEEEecCCCceEEEEEee
Confidence 887776666665555543
No 296
>KOG0316|consensus
Probab=40.66 E-value=1.8e+02 Score=22.90 Aligned_cols=157 Identities=8% Similarity=0.008 Sum_probs=90.1
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
.+...++.... +.-|.+......+++.|.........+..+....+.+.+.+ ...+.++..- ..++...+......
T Consensus 60 ~EVlD~~~s~D-nskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNe-esSVv~Sgsf--D~s~r~wDCRS~s~ 135 (307)
T KOG0316|consen 60 HEVLDAALSSD-NSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNE-ESSVVASGSF--DSSVRLWDCRSRSF 135 (307)
T ss_pred ceeeecccccc-ccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecC-cceEEEeccc--cceeEEEEcccCCC
Confidence 45555555442 33444555667788888877776666667888899999986 3444443221 23466566554443
Q ss_pred EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceE-EEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPF-GLSIT-DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~-gla~~-~~~ly~td~~~~~i~~~~ 201 (232)
+.+..-. -..-.-+++|-. +...++-+..+.+...+++-+. .....+.+|. .+.+- ++....+-.-...+.-++
T Consensus 136 ePiQild-ea~D~V~Si~v~-~heIvaGS~DGtvRtydiR~G~--l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlD 211 (307)
T KOG0316|consen 136 EPIQILD-EAKDGVSSIDVA-EHEIVAGSVDGTVRTYDIRKGT--LSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLD 211 (307)
T ss_pred Cccchhh-hhcCceeEEEec-ccEEEeeccCCcEEEEEeecce--eehhhcCCcceeEEecCCCCEEEEeeccceeeecc
Confidence 3332211 112233445554 5666787888888888887543 2334566665 44452 445555555556677777
Q ss_pred CC-CCCcc
Q psy5751 202 KE-GERAP 208 (232)
Q Consensus 202 ~~-g~~~~ 208 (232)
+. |+.++
T Consensus 212 k~tGklL~ 219 (307)
T KOG0316|consen 212 KETGKLLK 219 (307)
T ss_pred cchhHHHH
Confidence 76 44443
No 297
>KOG4227|consensus
Probab=39.00 E-value=2.4e+02 Score=23.90 Aligned_cols=103 Identities=13% Similarity=0.067 Sum_probs=61.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-- 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-- 77 (232)
..+++|+..+..|| +--..+ .+.+.++..+..--+... +....+++.+.+. .+++.+.+..+++...+.....
T Consensus 108 IF~L~F~~~N~~~~-SG~~~~-~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~-DN~~~~~t~~~~V~~~D~Rd~~~~ 184 (609)
T KOG4227|consen 108 IFSLEFDLENRFLY-SGERWG-TVIKHDIETKQSIYVANENNNRGDVYHMDQHPT-DNTLIVVTRAKLVSFIDNRDRQNP 184 (609)
T ss_pred eEEEEEccCCeeEe-cCCCcc-eeEeeecccceeeeeecccCcccceeecccCCC-CceEEEEecCceEEEEeccCCCCC
Confidence 45788988555555 333444 677777776553222322 2347889999986 6677777777888888765543
Q ss_pred CEEEEe-CCCCCceEEEEeCCCCeEEEEEcC
Q psy5751 78 PKVIVS-KDLVNPRGIVVHPYYRKLFWSDWN 107 (232)
Q Consensus 78 ~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~ 107 (232)
...++. .....-....+.|..-.|..+...
T Consensus 185 ~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~ 215 (609)
T KOG4227|consen 185 ISLVLPANSGKNFYTAEFHPETPALILVNSE 215 (609)
T ss_pred CceeeecCCCccceeeeecCCCceeEEeccc
Confidence 233332 233333455566666566555443
No 298
>KOG2321|consensus
Probab=38.80 E-value=2.9e+02 Score=24.77 Aligned_cols=148 Identities=12% Similarity=0.086 Sum_probs=81.0
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-CCccEEE---EeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-RSPEGLT---FDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-~~p~gl~---~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|...+..+.+..+-.. .|+|..+++...+.. +...+ ..+..+. =|+ .+.++.-. ...|..-...|..-..
T Consensus 57 ik~s~DGqY~lAtG~Y-KP~ikvydlanLSLK--FERhlDae~V~feiLsDD~-SK~v~L~~--DR~IefHak~G~hy~~ 130 (703)
T KOG2321|consen 57 IKVSPDGQYLLATGTY-KPQIKVYDLANLSLK--FERHLDAEVVDFEILSDDY-SKSVFLQN--DRTIEFHAKYGRHYRT 130 (703)
T ss_pred eEecCCCcEEEEeccc-CCceEEEEcccceee--eeecccccceeEEEeccch-hhheEeec--CceeeehhhcCeeeee
Confidence 4455534444433333 348888888754431 11110 1222222 233 33333221 1245444444444333
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
.+. ..-++|+++..+--||....+. .|+|.+|+-+.....+... ...-|.+.+.+.++.| -+-...+.|...
T Consensus 131 RIP---~~GRDm~y~~~scDly~~gsg~---evYRlNLEqGrfL~P~~~~-~~~lN~v~in~~hgLl-a~Gt~~g~VEfw 202 (703)
T KOG2321|consen 131 RIP---KFGRDMKYHKPSCDLYLVGSGS---EVYRLNLEQGRFLNPFETD-SGELNVVSINEEHGLL-ACGTEDGVVEFW 202 (703)
T ss_pred ecC---cCCccccccCCCccEEEeecCc---ceEEEEccccccccccccc-cccceeeeecCccceE-EecccCceEEEe
Confidence 332 1236899999999999998764 4999999865433333332 5567888888875544 444557788888
Q ss_pred ecCCCc
Q psy5751 161 TIRNRV 166 (232)
Q Consensus 161 ~~~g~~ 166 (232)
|++...
T Consensus 203 DpR~ks 208 (703)
T KOG2321|consen 203 DPRDKS 208 (703)
T ss_pred cchhhh
Confidence 887543
No 299
>KOG2321|consensus
Probab=38.27 E-value=3e+02 Score=24.72 Aligned_cols=74 Identities=8% Similarity=0.066 Sum_probs=46.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.+.|+.-+--||.+-.+. .|+|++++.+..-.-+.......+.+.+.+..+ |..+....+.+...|.....+..
T Consensus 138 Dm~y~~~scDly~~gsg~--evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hg-Lla~Gt~~g~VEfwDpR~ksrv~ 211 (703)
T KOG2321|consen 138 DMKYHKPSCDLYLVGSGS--EVYRLNLEQGRFLNPFETDSGELNVVSINEEHG-LLACGTEDGVVEFWDPRDKSRVG 211 (703)
T ss_pred cccccCCCccEEEeecCc--ceEEEEccccccccccccccccceeeeecCccc-eEEecccCceEEEecchhhhhhe
Confidence 466777677788776654 499999985443122222334566677777554 55566666777777776655433
No 300
>KOG0303|consensus
Probab=37.64 E-value=2.6e+02 Score=23.80 Aligned_cols=210 Identities=9% Similarity=0.000 Sum_probs=108.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEc--CCCcee-----EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHL--DGKNVE-----DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~--~g~~~~-----~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.++|++.++.+..+-..+- .|....+ +|.... ..+...-....-++.++...++..+-...+.|...+....
T Consensus 86 Di~w~PfnD~vIASgSeD~-~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tg 164 (472)
T KOG0303|consen 86 DIDWCPFNDCVIASGSEDT-KVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTG 164 (472)
T ss_pred ccccCccCCceeecCCCCc-eEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCC
Confidence 5677776666655543333 5554444 332211 1111122344445667766777666666778888888765
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEEEC---
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWVDA--- 152 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~d~--- 152 (232)
.....+. .-....+|.... +|.++.+... .-+|...+.......... .......+..+-+. ++.++.+--
T Consensus 165 eali~l~-hpd~i~S~sfn~-dGs~l~Ttck--DKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~--~g~i~tTGfsr~ 238 (472)
T KOG0303|consen 165 EALITLD-HPDMVYSMSFNR-DGSLLCTTCK--DKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLA--SGKIFTTGFSRM 238 (472)
T ss_pred ceeeecC-CCCeEEEEEecc-CCceeeeecc--cceeEEEcCCCCcEeeecccccCCCcceeEEec--cCceeeeccccc
Confidence 5433332 444556788885 7777777654 345666665433322211 11101222222222 233333211
Q ss_pred CCCcEEEEecCCCceEEEecCCCceEEEEE---E--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCccee
Q psy5751 153 DSKSLECMTIRNRVRRKVYSNCTYPFGLSI---T--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYM 220 (232)
Q Consensus 153 ~~~~i~~~~~~g~~~~~~~~~~~~p~gla~---~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p 220 (232)
....+...+.+........+.+....|+-+ | ...+|.+--+.+.|..+....+....-++..+.+.+|
T Consensus 239 seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~ep 311 (472)
T KOG0303|consen 239 SERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEP 311 (472)
T ss_pred cccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCc
Confidence 112233333333222222334455566664 2 4578888888888888887776655555555555444
No 301
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=37.39 E-value=2.4e+02 Score=23.35 Aligned_cols=139 Identities=14% Similarity=0.037 Sum_probs=65.9
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCce-eEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEEeC-CCCCCEEEEeC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNV-EDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMANL-NDDQPKVIVSK 84 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~ 84 (232)
++++|+. ..++ .|+.++.++... ...... .+..|. .+. .++||+.+... .++..|. +|...=..-..
T Consensus 68 dg~v~~~-~~~G-~i~A~d~~~g~~~W~~~~~~~~~~~~~~~--~~~--~G~i~~g~~~g-~~y~ld~~~G~~~W~~~~~ 140 (370)
T COG1520 68 DGTVYVG-TRDG-NIFALNPDTGLVKWSYPLLGAVAQLSGPI--LGS--DGKIYVGSWDG-KLYALDASTGTLVWSRNVG 140 (370)
T ss_pred CCeEEEe-cCCC-cEEEEeCCCCcEEecccCcCcceeccCce--EEe--CCeEEEecccc-eEEEEECCCCcEEEEEecC
Confidence 6777776 2333 688888776542 211111 222332 222 57788887664 7888888 56543211111
Q ss_pred C-CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CCCcEEEEEc--CCCCCcceEEEeCCCCEEEEEECC-CCcEEE
Q psy5751 85 D-LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GTDREIFLKA--ADLKLPNSLAVDFRTDELCWVDAD-SKSLEC 159 (232)
Q Consensus 85 ~-~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~~~~~~~~~--~~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~ 159 (232)
. ..-.....+. ++.+|+.. ..++++.++.+ |..+-..-.. .........+ ...+.+|+.... .+.++.
T Consensus 141 ~~~~~~~~~v~~--~~~v~~~s---~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~--~~~~~vy~~~~~~~~~~~a 213 (370)
T COG1520 141 GSPYYASPPVVG--DGTVYVGT---DDGHLYALNADTGTLKWTYETPAPLSLSIYGSPA--IASGTVYVGSDGYDGILYA 213 (370)
T ss_pred CCeEEecCcEEc--CcEEEEec---CCCeEEEEEccCCcEEEEEecCCccccccccCce--eecceEEEecCCCcceEEE
Confidence 1 0011122233 66777663 13456666666 3332211110 0012222222 223677777543 446777
Q ss_pred EecC
Q psy5751 160 MTIR 163 (232)
Q Consensus 160 ~~~~ 163 (232)
+++.
T Consensus 214 ~~~~ 217 (370)
T COG1520 214 LNAE 217 (370)
T ss_pred EEcc
Confidence 7773
No 302
>KOG1645|consensus
Probab=36.59 E-value=2.5e+02 Score=23.92 Aligned_cols=74 Identities=15% Similarity=0.109 Sum_probs=48.3
Q ss_pred CCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 85 DLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 85 ~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
.....++|++.|.+. .|-.+.. ..+|..+++........... -..+...++|.++....++-..+|.|..+|++
T Consensus 192 ~g~~IrdlafSp~~~GLl~~asl---~nkiki~dlet~~~vssy~a--~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 192 EGSFIRDLAFSPFNEGLLGLASL---GNKIKIMDLETSCVVSSYIA--YNQIWSCCWDLDERHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cchhhhhhccCccccceeeeecc---CceEEEEecccceeeeheec--cCCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence 445678899998765 4444443 35688888875543322222 45678888888766555565667888888886
No 303
>KOG0321|consensus
Probab=35.99 E-value=2.8e+02 Score=25.09 Aligned_cols=103 Identities=10% Similarity=-0.035 Sum_probs=58.2
Q ss_pred CCCEEEEEEcCCCCcEEEEEcCCCcee--E--EEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE--E
Q psy5751 10 VEGQVYYSSVADKSSIKRAHLDGKNVE--D--VITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV--I 81 (232)
Q Consensus 10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~--~--~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~ 81 (232)
.+..||++|...+ |..++......+ + +... ..+.+-.+.--+ +..++++-.+...|...+..+....- +
T Consensus 63 ~eHiLavadE~G~--i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~ 139 (720)
T KOG0321|consen 63 KEHILAVADEDGG--IILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRL 139 (720)
T ss_pred ccceEEEecCCCc--eeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeeccee
Confidence 3557787776644 555554432221 1 1111 112333333333 56777787888888888887765321 1
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~ 117 (232)
.-++-.....+++.+.+..+|++... .+.|...+
T Consensus 140 ~~GH~~SvkS~cf~~~n~~vF~tGgR--Dg~illWD 173 (720)
T KOG0321|consen 140 NLGHTGSVKSECFMPTNPAVFCTGGR--DGEILLWD 173 (720)
T ss_pred ecccccccchhhhccCCCcceeeccC--CCcEEEEE
Confidence 22355566788999988888888765 33444433
No 304
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.57 E-value=2.5e+02 Score=22.98 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=26.5
Q ss_pred cceEEEeCCCCEEEEEECCC--C-cEEEEecCCCceEEEe
Q psy5751 135 PNSLAVDFRTDELCWVDADS--K-SLECMTIRNRVRRKVY 171 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~~~--~-~i~~~~~~g~~~~~~~ 171 (232)
.+.|.-|+.+++||++-... + -|++++.++++.+.+.
T Consensus 108 VSdIlYdP~~D~LLlAR~DGh~nLGvy~ldr~~g~~~~L~ 147 (339)
T PF09910_consen 108 VSDILYDPYEDRLLLARADGHANLGVYSLDRRTGKAEKLS 147 (339)
T ss_pred hhheeeCCCcCEEEEEecCCcceeeeEEEcccCCceeecc
Confidence 46788899899999994432 2 4888887776666553
No 305
>KOG0271|consensus
Probab=34.13 E-value=2.9e+02 Score=23.40 Aligned_cols=162 Identities=11% Similarity=-0.027 Sum_probs=89.5
Q ss_pred CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751 45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE 124 (232)
Q Consensus 45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~ 124 (232)
....+++.+. +.-.++..+...+...|++...+...+..+-+-...++..|... ...+.. -.+.|...+.......
T Consensus 117 ~Vl~~~fsp~-g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk-~iASG~--~dg~I~lwdpktg~~~ 192 (480)
T KOG0271|consen 117 AVLSVQFSPT-GSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGK-KIASGS--KDGSIRLWDPKTGQQI 192 (480)
T ss_pred cEEEEEecCC-CceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcc-hhhccc--cCCeEEEecCCCCCcc
Confidence 4456777774 44446777777888889888877777766666777888888444 333322 2456766664433221
Q ss_pred EEEEcCCCCCcceEEEeCC----CCEEEEEECCCCcEEEEecCCCceEEEecCCCceE-EEEEECCEEEEEeCCCCcEEE
Q psy5751 125 IFLKAADLKLPNSLAVDFR----TDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPF-GLSITDEKYYWTDWKTNRIES 199 (232)
Q Consensus 125 ~~~~~~~~~~p~~l~~d~~----~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~-gla~~~~~ly~td~~~~~i~~ 199 (232)
.-.....-.+.++|+..|- ..++.-+-+..+.|...+...+......+.-..|. .+.+-++.+.++-++.++|..
T Consensus 193 g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkv 272 (480)
T KOG0271|consen 193 GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKV 272 (480)
T ss_pred cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEE
Confidence 1111111345566665542 13445556667777777777655444444333333 333443444555555666555
Q ss_pred EeCC-CCCcceE
Q psy5751 200 ANKE-GERAPSI 210 (232)
Q Consensus 200 ~~~~-g~~~~~i 210 (232)
-+.. |...+.+
T Consensus 273 w~a~dG~~~r~l 284 (480)
T KOG0271|consen 273 WRALDGKLCREL 284 (480)
T ss_pred EEccchhHHHhh
Confidence 4443 5444433
No 306
>KOG0640|consensus
Probab=33.97 E-value=2.7e+02 Score=22.92 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=62.9
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee---EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE---DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~---~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.++|++ ...+..+...++ .|.-++......+ +++. .......|.+.+.+..|.+. .....+..+|....++-+
T Consensus 177 ~l~FHP-re~ILiS~srD~-tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvg-TdHp~~rlYdv~T~Qcfv 252 (430)
T KOG0640|consen 177 DLDFHP-RETILISGSRDN-TVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVG-TDHPTLRLYDVNTYQCFV 252 (430)
T ss_pred ceeecc-hhheEEeccCCC-eEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEe-cCCCceeEEeccceeEee
Confidence 567888 455555666666 7777777754321 2222 34567889999977777654 333456666776655433
Q ss_pred EEeCC---CCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751 81 IVSKD---LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116 (232)
Q Consensus 81 ~~~~~---~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~ 116 (232)
-.... ......+-..+ ++.||++... .+.|...
T Consensus 253 sanPd~qht~ai~~V~Ys~-t~~lYvTaSk--DG~Iklw 288 (430)
T KOG0640|consen 253 SANPDDQHTGAITQVRYSS-TGSLYVTASK--DGAIKLW 288 (430)
T ss_pred ecCcccccccceeEEEecC-CccEEEEecc--CCcEEee
Confidence 32211 22334555776 8999999875 3445443
No 307
>KOG0288|consensus
Probab=33.30 E-value=3.1e+02 Score=23.43 Aligned_cols=114 Identities=13% Similarity=0.113 Sum_probs=63.6
Q ss_pred CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
...++|++. ...+.++-- ..+|...+..+......+.. ......|.+......|..+ +..+.+..++..+..
T Consensus 303 S~cnDI~~~---~~~~~SgH~--DkkvRfwD~Rs~~~~~sv~~--gg~vtSl~ls~~g~~lLss-sRDdtl~viDlRt~e 374 (459)
T KOG0288|consen 303 SQCNDIVCS---ISDVISGHF--DKKVRFWDIRSADKTRSVPL--GGRVTSLDLSMDGLELLSS-SRDDTLKVIDLRTKE 374 (459)
T ss_pred ccccceEec---ceeeeeccc--ccceEEEeccCCceeeEeec--CcceeeEeeccCCeEEeee-cCCCceeeeeccccc
Confidence 344566653 344444322 34566666555544433333 3456677777776666555 777889999999887
Q ss_pred eEEEec--C--CCceEEEEEE-CCEEEEE-eCCCCcEEEEeCCCCCcc
Q psy5751 167 RRKVYS--N--CTYPFGLSIT-DEKYYWT-DWKTNRIESANKEGERAP 208 (232)
Q Consensus 167 ~~~~~~--~--~~~p~gla~~-~~~ly~t-d~~~~~i~~~~~~g~~~~ 208 (232)
....++ + ..+-+.-+++ .+.=|++ -..++.|+.-+..++..+
T Consensus 375 I~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE 422 (459)
T KOG0288|consen 375 IRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLE 422 (459)
T ss_pred EEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEE
Confidence 766543 2 2222222333 3333443 445577777777765544
No 308
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=33.16 E-value=2.6e+02 Score=22.53 Aligned_cols=127 Identities=14% Similarity=0.021 Sum_probs=69.7
Q ss_pred CeEEEEeCCCC-----CCEEEEeCCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceE
Q psy5751 66 DTISMANLNDD-----QPKVIVSKDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSL 138 (232)
Q Consensus 66 ~~I~~~~~~g~-----~~~~~~~~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l 138 (232)
|+|+.+++... ..+.+...... .+.+++.. +++|..+- ..+|+..+++... ........ ......
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~~----g~~l~v~~l~~~~~l~~~~~~~--~~~~i~ 133 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVAV----GNKLYVYDLDNSKTLLKKAFYD--SPFYIT 133 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEEE----TTEEEEEEEETTSSEEEEEEE---BSSSEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEee----cCEEEEEEccCcccchhhheec--ceEEEE
Confidence 67777777663 22333332222 34566655 78876666 3457777777766 44333321 122455
Q ss_pred EEeCCCCEEEEEECCCC-cEEEEecCCCceEEEecC--CCceEEEEE--ECCEEEEEeCCCCcEEEEe
Q psy5751 139 AVDFRTDELCWVDADSK-SLECMTIRNRVRRKVYSN--CTYPFGLSI--TDEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 139 ~~d~~~~~Ly~~d~~~~-~i~~~~~~g~~~~~~~~~--~~~p~gla~--~~~~ly~td~~~~~i~~~~ 201 (232)
.+...+++++++|...+ .+.+++.++.....+... ..+...+++ +++.+..+|...+ +..+.
T Consensus 134 sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gn-l~~l~ 200 (321)
T PF03178_consen 134 SLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGN-LFVLR 200 (321)
T ss_dssp EEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSE-EEEEE
T ss_pred EEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCe-EEEEE
Confidence 55555689999998766 455556544444444442 223344444 3457777787543 44333
No 309
>PF08470 NTNH_C: Nontoxic nonhaemagglutinin C-terminal; InterPro: IPR013677 Bacteria of the Clostridium genus produce protein neurotoxins, which are complexes consisting of neurotoxin (NT), haemagglutinin (HA), nontoxic nonhaemagglutinin (NTNH), and RNA [, ]. The domain described here is found at the C terminus of the NTNH component. ; PDB: 3V0B_B 3V0A_B.
Probab=31.77 E-value=1.6e+02 Score=21.01 Aligned_cols=59 Identities=8% Similarity=0.147 Sum_probs=33.1
Q ss_pred CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 99 RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 99 ~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
..-|..-.. +..+|..++-.......++... +..|+++++...+..+|.+......-|.
T Consensus 89 ~EKYidis~-enNriqlvd~k~~a~k~iinNd-iF~sNclt~~~n~ky~~ls~k~~nynwm 147 (165)
T PF08470_consen 89 TEKYIDISS-ENNRIQLVDNKNNAKKIIINND-IFISNCLTLSYNNKYISLSMKDENYNWM 147 (165)
T ss_dssp SEEEEEE---TTSBEEEES-GGG---EEEE---TT-TT-BEEEETTEEEEEEEE-SS-EEE
T ss_pred cceEEEeec-CCceEEEEecCCCceEEEEEcC-eeccceEEEEECCEEEEEEEccCCccEE
Confidence 344444322 4678888776655666667776 9999999999988888888655544333
No 310
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=31.72 E-value=2.9e+02 Score=22.61 Aligned_cols=96 Identities=10% Similarity=0.180 Sum_probs=61.5
Q ss_pred CeEEEEeCCCCCCEEEEeCCCCCc-------eEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751 66 DTISMANLNDDQPKVIVSKDLVNP-------RGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNS 137 (232)
Q Consensus 66 ~~I~~~~~~g~~~~~~~~~~~~~p-------~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~ 137 (232)
..|..+|.+...++.+..++..++ ..|..||.++.|+.+-... .+--|++++..+...+.+.... .+-|
T Consensus 78 SHVH~yd~e~~~VrLLWkesih~~~~WaGEVSdIlYdP~~D~LLlAR~DGh~nLGvy~ldr~~g~~~~L~~~p---s~KG 154 (339)
T PF09910_consen 78 SHVHEYDTENDSVRLLWKESIHDKTKWAGEVSDILYDPYEDRLLLARADGHANLGVYSLDRRTGKAEKLSSNP---SLKG 154 (339)
T ss_pred ceEEEEEcCCCeEEEEEecccCCccccccchhheeeCCCcCEEEEEecCCcceeeeEEEcccCCceeeccCCC---CcCc
Confidence 467888877777777777655544 5788999999999986432 1334677776666666665543 4444
Q ss_pred EEEeCCCCEEEEEE----CCCCcEEEEecCCCce
Q psy5751 138 LAVDFRTDELCWVD----ADSKSLECMTIRNRVR 167 (232)
Q Consensus 138 l~~d~~~~~Ly~~d----~~~~~i~~~~~~g~~~ 167 (232)
..+. +..|++- .+...|.++|+..++.
T Consensus 155 ~~~~---D~a~F~i~~~~~g~~~i~~~Dli~~~~ 185 (339)
T PF09910_consen 155 TLVH---DYACFGINNFHKGVSGIHCLDLISGKW 185 (339)
T ss_pred eEee---eeEEEeccccccCCceEEEEEccCCeE
Confidence 4444 2334432 1245688888876554
No 311
>PF13970 DUF4221: Domain of unknown function (DUF4221); PDB: 3S9J_A.
Probab=31.33 E-value=2.8e+02 Score=22.61 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=42.3
Q ss_pred CCcceEE--EeCCCCEEEEEECCC-CcEEEEecCCCceE-EE-ec-----CCCceEEEEE--ECCEEEEEeCCCCcEEEE
Q psy5751 133 KLPNSLA--VDFRTDELCWVDADS-KSLECMTIRNRVRR-KV-YS-----NCTYPFGLSI--TDEKYYWTDWKTNRIESA 200 (232)
Q Consensus 133 ~~p~~l~--~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~~-~~-~~-----~~~~p~gla~--~~~~ly~td~~~~~i~~~ 200 (232)
..+.++. ....+..|++-+... +.|..++++..+.. .+ .+ +.+.+.|... ++.+|+.+ ....++..+
T Consensus 42 ~~~~~l~~~~~~~~~yL~f~n~~~~~~i~~~Dl~~~~l~~~i~~ekeGpngi~~~~~~~~~~Dsi~l~~~-~~~~~l~~~ 120 (333)
T PF13970_consen 42 YLSYYLQSFSSDGKKYLYFLNNYKSHSIDIYDLDSGKLVKKIPFEKEGPNGIGRPFGFFQNLDSIFLFNS-YAFPKLFLF 120 (333)
T ss_dssp S--SSEEEEEETTEEEEEEEE-ST--EEEEEETTTTEEEEEEE-BSSSTTB-TT---EEESSSTTSEEEE-GGGTEEEEE
T ss_pred cccccEEEEEcCCcEEEEEEcCCCcceEEEEECCCCceeeeeeeeeECCCCccccccceEcCCceEEEec-CCcceEEEE
Confidence 3344443 344445665677665 89999999976442 23 22 2445555553 34466665 667889999
Q ss_pred eCCCCCcceEEecc
Q psy5751 201 NKEGERAPSIALDM 214 (232)
Q Consensus 201 ~~~g~~~~~i~~~~ 214 (232)
+..|...+.+.+..
T Consensus 121 n~~G~~~~~~~~~~ 134 (333)
T PF13970_consen 121 NSQGEVLKKIDLEE 134 (333)
T ss_dssp -TT--EEEEEE---
T ss_pred cCCCeEEEEEeccc
Confidence 99998888776654
No 312
>KOG0646|consensus
Probab=30.19 E-value=3.6e+02 Score=23.30 Aligned_cols=113 Identities=17% Similarity=0.121 Sum_probs=64.6
Q ss_pred CccEEEEee--cCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 45 SPEGLTFDW--VNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 45 ~p~gl~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
.+.++-++. .+.+|| +-...+.+...++.+...-.-+. --..+..+++||....+|+-. ..++|+...+.+..
T Consensus 176 sITDl~ig~Gg~~~rl~-TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt---~~G~I~~~~~~~~~ 250 (476)
T KOG0646|consen 176 SITDLQIGSGGTNARLY-TASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGT---EEGKIFQNLLFKLS 250 (476)
T ss_pred eeEEEEecCCCccceEE-EecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecC---CcceEEeeehhcCC
Confidence 445555543 245676 44445566677776654222111 234578999999888888765 24667776654432
Q ss_pred -----------------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 123 -----------------REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 123 -----------------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
..++...........|++..+ +.|..+-...+.|-..++-
T Consensus 251 ~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~D-gtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 251 GQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTD-GTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred cccccccccccccccceeeeeccccCCcceeEEEEecC-ccEEEeeCCCCCEEEEecc
Confidence 222222211235678899887 5555565556666555554
No 313
>KOG1310|consensus
Probab=29.60 E-value=4.1e+02 Score=23.78 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=66.5
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEee-cCCeEEEEeCCCCeEEEEeCCCCC----
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDW-VNRVLYWTDSQMDTISMANLNDDQ---- 77 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~~~~I~~~~~~g~~---- 77 (232)
.++|+. ++.|..+-..+. ++...+.-.... ..+.......+.++.+-+ .++.|..+......|.+.|++...
T Consensus 55 ~LeWn~-dG~lL~SGSDD~-r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~ 132 (758)
T KOG1310|consen 55 CLEWNA-DGELLASGSDDT-RLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGM 132 (758)
T ss_pred ceeecC-CCCEEeecCCcc-eEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccccccc
Confidence 356665 444444444444 666666553222 122223345666666544 456787788888889999987421
Q ss_pred ------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 78 ------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 78 ------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
..........+...||..|..-..||+... .+.|...++.
T Consensus 133 d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasE--DGtirQyDiR 178 (758)
T KOG1310|consen 133 DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASE--DGTIRQYDIR 178 (758)
T ss_pred ccCccchhhhhhhhhhhhhheecCCCCCceEEEecC--Ccceeeeccc
Confidence 111222456677889999855489998754 5667777653
No 314
>KOG0301|consensus
Probab=28.37 E-value=4.7e+02 Score=24.02 Aligned_cols=166 Identities=13% Similarity=0.101 Sum_probs=87.7
Q ss_pred EEEeec-CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE
Q psy5751 49 LTFDWV-NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL 127 (232)
Q Consensus 49 l~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~ 127 (232)
+++.+. +.+|. .-.....|.+..+++..+-..+..+-.+..++.+.. .+.|.-..|.. ..+||+.. .-...+.
T Consensus 64 i~y~e~~~~~l~-~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~~iSgSWD~-TakvW~~~---~l~~~l~ 137 (745)
T KOG0301|consen 64 ICYAESDKGRLV-VGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGTLISGSWDS-TAKVWRIG---ELVYSLQ 137 (745)
T ss_pred ceeccccCcceE-eecccceEEEEecCCCCchhhhhccccceeeeecCC-cCceEeccccc-ceEEecch---hhhcccC
Confidence 444432 23344 334445677777777776666655667788888885 55555556663 56777642 1111111
Q ss_pred EcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751 128 KAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERA 207 (232)
Q Consensus 128 ~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~ 207 (232)
.. -.....++.=+. ..|++-+....|.... .|...+++.....-..|+++-.+.=+.+-...+-|..-+.+|+.+
T Consensus 138 gH--~asVWAv~~l~e--~~~vTgsaDKtIklWk-~~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ge~l 212 (745)
T KOG0301|consen 138 GH--TASVWAVASLPE--NTYVTGSADKTIKLWK-GGTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDGEVL 212 (745)
T ss_pred Cc--chheeeeeecCC--CcEEeccCcceeeecc-CCchhhhhccchhheeeeEEecCCCeEeecCCceEEEEeccCcee
Confidence 10 112234444443 3788866555444432 344445554444446688874332233334456666666666665
Q ss_pred ceEEeccCCcceeEEEEEEcC
Q psy5751 208 PSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 208 ~~i~~~~~~~~~p~gi~~~~~ 228 (232)
.... .+.+..|.|+++++
T Consensus 213 ~~~~---ghtn~vYsis~~~~ 230 (745)
T KOG0301|consen 213 LEMH---GHTNFVYSISMALS 230 (745)
T ss_pred eeee---ccceEEEEEEecCC
Confidence 4332 44556677775554
No 315
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=27.72 E-value=3.4e+02 Score=22.11 Aligned_cols=211 Identities=11% Similarity=0.005 Sum_probs=90.3
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEE-eCCC-CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVI-TTNI-RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~-~~~~-~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
+|.++. +..|++-. . .+.....+|. ..+++- ...+ ..+.++..-. .+.++.+. ..+.|++..-.|..=+.
T Consensus 66 ~I~f~~--~~g~ivG~--~-g~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~-~~~~~l~~-~~G~iy~T~DgG~tW~~ 138 (302)
T PF14870_consen 66 SISFDG--NEGWIVGE--P-GLLLHTTDGGKTWERVPLSSKLPGSPFGITALG-DGSAELAG-DRGAIYRTTDGGKTWQA 138 (302)
T ss_dssp EEEEET--TEEEEEEE--T-TEEEEESSTTSS-EE----TT-SS-EEEEEEEE-TTEEEEEE-TT--EEEESSTTSSEEE
T ss_pred EEEecC--CceEEEcC--C-ceEEEecCCCCCcEEeecCCCCCCCeeEEEEcC-CCcEEEEc-CCCcEEEeCCCCCCeeE
Confidence 445543 44554432 2 2333345544 443432 2222 3555555443 34454443 34678888777765455
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+..+......++...+ +|.+..... .+.+++.--.|...-..........-..|.++++ +.|+.+. ..+.|...
T Consensus 139 ~~~~~~gs~~~~~r~~-dG~~vavs~---~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~-~~lw~~~-~Gg~~~~s 212 (302)
T PF14870_consen 139 VVSETSGSINDITRSS-DGRYVAVSS---RGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPD-GNLWMLA-RGGQIQFS 212 (302)
T ss_dssp EE-S----EEEEEE-T-TS-EEEEET---TSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TT-S-EEEEE-TTTEEEEE
T ss_pred cccCCcceeEeEEECC-CCcEEEEEC---cccEEEEecCCCccceEEccCccceehhceecCC-CCEEEEe-CCcEEEEc
Confidence 5554555667777765 444332332 3457766555554333332221456678888887 7777765 45666666
Q ss_pred ecCCCceEEEec----C---CCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 161 TIRNRVRRKVYS----N---CTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 161 ~~~g~~~~~~~~----~---~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+ +......+.+ . .-.-..+++..+.-.|+-.+++.+.+=.-.|+..+.......-+...+.|.++++
T Consensus 213 ~-~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~ 286 (302)
T PF14870_consen 213 D-DPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNP 286 (302)
T ss_dssp E--TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EEEESSTTSS-EE-GGGTTSSS---EEEEEET
T ss_pred c-CCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEEEeCCCCccceECccccCCCCceEEEEEcCC
Confidence 6 2223333322 1 1112355665444445555566555444446666644332233556677766654
No 316
>KOG0296|consensus
Probab=27.70 E-value=3.7e+02 Score=22.57 Aligned_cols=192 Identities=6% Similarity=0.000 Sum_probs=106.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
++++.+| ++.|..+--.++ +=+..+.......-.+...-.....+.+...+ .+..+-...+.+++.....+..+-.+
T Consensus 68 Favsl~P-~~~l~aTGGgDD-~AflW~~~~ge~~~eltgHKDSVt~~~Fshdg-tlLATGdmsG~v~v~~~stg~~~~~~ 144 (399)
T KOG0296|consen 68 FAVSLHP-NNNLVATGGGDD-LAFLWDISTGEFAGELTGHKDSVTCCSFSHDG-TLLATGDMSGKVLVFKVSTGGEQWKL 144 (399)
T ss_pred EEEEeCC-CCceEEecCCCc-eEEEEEccCCcceeEecCCCCceEEEEEccCc-eEEEecCCCccEEEEEcccCceEEEe
Confidence 5677777 777777666666 66666665444222222222455666666533 34445555677887777665544333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
........=|.-+| .+.++.+-.. .+.+++..+.......+.... -...+.=.|-++++++.... ..+.|...++
T Consensus 145 ~~e~~dieWl~WHp-~a~illAG~~--DGsvWmw~ip~~~~~kv~~Gh-~~~ct~G~f~pdGKr~~tgy-~dgti~~Wn~ 219 (399)
T KOG0296|consen 145 DQEVEDIEWLKWHP-RAHILLAGST--DGSVWMWQIPSQALCKVMSGH-NSPCTCGEFIPDGKRILTGY-DDGTIIVWNP 219 (399)
T ss_pred ecccCceEEEEecc-cccEEEeecC--CCcEEEEECCCcceeeEecCC-CCCcccccccCCCceEEEEe-cCceEEEEec
Confidence 23444555566777 5555555443 567899888875444444432 22223334556666665554 3777888888
Q ss_pred CCCce-EEEe--cCCCce-E------EEEE---ECCEEEEEeCCCCcEEEEeC
Q psy5751 163 RNRVR-RKVY--SNCTYP-F------GLSI---TDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 163 ~g~~~-~~~~--~~~~~p-~------gla~---~~~~ly~td~~~~~i~~~~~ 202 (232)
..+.. ..+- +++..| . ...+ .++..+..+..+++|..++-
T Consensus 220 ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n 272 (399)
T KOG0296|consen 220 KTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNN 272 (399)
T ss_pred CCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecC
Confidence 75533 2221 122221 1 1122 25667777777777766665
No 317
>KOG0299|consensus
Probab=27.51 E-value=4.1e+02 Score=23.01 Aligned_cols=188 Identities=7% Similarity=0.050 Sum_probs=99.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEEEe-----------------CCCCCccEEEEeecCCeEEEEeC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVIT-----------------TNIRSPEGLTFDWVNRVLYWTDS 63 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~-----------------~~~~~p~gl~~d~~~~~ly~~d~ 63 (232)
++++++.+.+.++|=++... .|.+...- |...+-++. ........+|+.+.++. +.+..
T Consensus 145 ~~~vals~d~~~~fsask~g--~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky-latgg 221 (479)
T KOG0299|consen 145 VTSVALSPDDKRVFSASKDG--TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY-LATGG 221 (479)
T ss_pred ceEEEeeccccceeecCCCc--ceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE-EEecC
Confidence 45777777667777555442 35554433 221100110 11234556888875543 33444
Q ss_pred CCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceE-EEeC
Q psy5751 64 QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSL-AVDF 142 (232)
Q Consensus 64 ~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l-~~d~ 142 (232)
....|...+.+.......+...-....++++-.-...||.+.... .|...+++-.. .+... ...+.++ .+|.
T Consensus 222 ~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr---svkvw~~~~~s---~vetl-yGHqd~v~~Ida 294 (479)
T KOG0299|consen 222 RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR---SVKVWSIDQLS---YVETL-YGHQDGVLGIDA 294 (479)
T ss_pred CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC---ceEEEehhHhH---HHHHH-hCCccceeeech
Confidence 456777888877665555555556677888887788899887653 24444443211 11111 2222222 3333
Q ss_pred CC-CEEEEEECC-C--CcEEEEecCCCceEEE-ecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 143 RT-DELCWVDAD-S--KSLECMTIRNRVRRKV-YSNCTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 143 ~~-~~Ly~~d~~-~--~~i~~~~~~g~~~~~~-~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
-. +++ +|-.+ . -++|.+ . ...+.+ ...-..+..+++-++.=|++-+.++.|.-.+..
T Consensus 295 L~reR~-vtVGgrDrT~rlwKi--~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~ 356 (479)
T KOG0299|consen 295 LSRERC-VTVGGRDRTVRLWKI--P-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLL 356 (479)
T ss_pred hcccce-EEeccccceeEEEec--c-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeec
Confidence 22 232 33332 2 244444 2 233334 345557888888766667887777766665544
No 318
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=26.94 E-value=3e+02 Score=21.34 Aligned_cols=147 Identities=13% Similarity=0.056 Sum_probs=72.5
Q ss_pred eecCCeEEEEeCCCCeEEEEeC-CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE---
Q psy5751 52 DWVNRVLYWTDSQMDTISMANL-NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL--- 127 (232)
Q Consensus 52 d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~--- 127 (232)
+..+++||+.. ..| ++..+. +......+.. .....-+++-+.-+.|..-.. +.++..+++.-......
T Consensus 4 ~~~~~~L~vGt-~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLsd----~~l~~~~L~~l~~~~~~~~~ 75 (275)
T PF00780_consen 4 DSWGDRLLVGT-EDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLSD----GQLYVYDLDSLEPVSTSAPL 75 (275)
T ss_pred ccCCCEEEEEE-CCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEcC----CccEEEEchhhccccccccc
Confidence 34478888883 344 888887 3333333332 223666776665555554431 34666655432211100
Q ss_pred ----------EcCCCCCcceEE---EeCCCCEEEEEECCCCcEEEEecCCC--ce-EEE--ecCCCceEEEEEECCEEEE
Q psy5751 128 ----------KAADLKLPNSLA---VDFRTDELCWVDADSKSLECMTIRNR--VR-RKV--YSNCTYPFGLSITDEKYYW 189 (232)
Q Consensus 128 ----------~~~~~~~p~~l~---~d~~~~~Ly~~d~~~~~i~~~~~~g~--~~-~~~--~~~~~~p~gla~~~~~ly~ 189 (232)
.-.......-.+ -.....+|.++... +|..+..... .. ..+ ......|..+++.++.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk--~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~~~i~v 153 (275)
T PF00780_consen 76 AFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKK--KILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLGNKICV 153 (275)
T ss_pred cccccccccccccccCCeeEEeeccccccceEEEEEECC--EEEEEEEECCcccccceeEEEEcCCCcEEEEEeCCEEEE
Confidence 000012223333 11222355555443 5555545432 21 222 2244667899998888888
Q ss_pred EeCCCCcEEEEeCCCCCcceE
Q psy5751 190 TDWKTNRIESANKEGERAPSI 210 (232)
Q Consensus 190 td~~~~~i~~~~~~g~~~~~i 210 (232)
+- .+....++......+.+
T Consensus 154 ~~--~~~f~~idl~~~~~~~l 172 (275)
T PF00780_consen 154 GT--SKGFYLIDLNTGSPSEL 172 (275)
T ss_pred Ee--CCceEEEecCCCCceEE
Confidence 76 34466677664443433
No 319
>KOG0643|consensus
Probab=26.25 E-value=3.5e+02 Score=21.80 Aligned_cols=192 Identities=10% Similarity=0.040 Sum_probs=103.8
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK 84 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 84 (232)
+-|+.+.+.||-+.....+.++ +.++|...-+. ......++.+++||..+.+ ++......+...|.....+...+.
T Consensus 16 iKyN~eGDLlFscaKD~~~~vw-~s~nGerlGty-~GHtGavW~~Did~~s~~l-iTGSAD~t~kLWDv~tGk~la~~k- 91 (327)
T KOG0643|consen 16 IKYNREGDLLFSCAKDSTPTVW-YSLNGERLGTY-DGHTGAVWCCDIDWDSKHL-ITGSADQTAKLWDVETGKQLATWK- 91 (327)
T ss_pred EEecCCCcEEEEecCCCCceEE-EecCCceeeee-cCCCceEEEEEecCCccee-eeccccceeEEEEcCCCcEEEEee-
Confidence 5677755566554444332232 35566443222 2334688999999977766 477777788888887766655554
Q ss_pred CCCCceEEEEeCCCCeEEE--EEcCCC-CCcEEEEeCC-------CCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 85 DLVNPRGIVVHPYYRKLFW--SDWNRS-GPKIEWSNLD-------GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 85 ~~~~p~~iavd~~~~~ly~--~d~~~~-~~~I~~~~~~-------g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
.....+.+-+++ .|.+.. +|-..+ ...|...++. +......+... -..++....++.++.|... ...
T Consensus 92 ~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~-~skit~a~Wg~l~~~ii~G-he~ 168 (327)
T KOG0643|consen 92 TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP-DSKITSALWGPLGETIIAG-HED 168 (327)
T ss_pred cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC-ccceeeeeecccCCEEEEe-cCC
Confidence 222345666665 444433 332211 2334444433 22212222222 4567777788877777554 457
Q ss_pred CcEEEEecCCCceEEEe--cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 155 KSLECMTIRNRVRRKVY--SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~--~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+.|.+.+...+...+-. ........|.+. ....|+|-+....-..++..
T Consensus 169 G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~ 220 (327)
T KOG0643|consen 169 GSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVR 220 (327)
T ss_pred CcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecc
Confidence 88999988865332211 122234455554 44566666555544444443
No 320
>KOG1408|consensus
Probab=26.21 E-value=5.4e+02 Score=24.02 Aligned_cols=110 Identities=9% Similarity=0.002 Sum_probs=0.0
Q ss_pred cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
+++++|+ +-.+..+-.....|...+.........+. ..-..+--+.+||..-+|-.+-.++. +-.++......
T Consensus 600 YDm~Vdp-~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdkt---l~~~Df~sgEc 675 (1080)
T KOG1408|consen 600 YDMAVDP-TSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKT---LCFVDFVSGEC 675 (1080)
T ss_pred EEeeeCC-CcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCc---eEEEEeccchh
Q ss_pred EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
..-...- -....|+.|..+.+.|.-+ ++.++|....+
T Consensus 676 vA~m~GH-sE~VTG~kF~nDCkHlISv-sgDgCIFvW~l 712 (1080)
T KOG1408|consen 676 VAQMTGH-SEAVTGVKFLNDCKHLISV-SGDGCIFVWKL 712 (1080)
T ss_pred hhhhcCc-chheeeeeecccchhheee-cCCceEEEEEC
No 321
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=24.94 E-value=3.5e+02 Score=21.38 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=17.6
Q ss_pred CceEEEEeC--CCCeEEEEEcCCCCCcEEEEeC
Q psy5751 88 NPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNL 118 (232)
Q Consensus 88 ~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~ 118 (232)
.|.++.+-. .+-+||+++ ++++|+|..+
T Consensus 132 g~iD~~vI~D~~n~yLFfa~---DnGkiYRs~~ 161 (271)
T PF03664_consen 132 GPIDQWVICDDTNMYLFFAG---DNGKIYRSSM 161 (271)
T ss_pred CceeeEEEecCCceEEEEcC---CCCcEEEecc
Confidence 455555433 345566665 5789999886
No 322
>KOG1517|consensus
Probab=24.86 E-value=6.8e+02 Score=24.68 Aligned_cols=168 Identities=11% Similarity=0.050 Sum_probs=93.4
Q ss_pred CCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe---C
Q psy5751 9 CVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS---K 84 (232)
Q Consensus 9 ~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---~ 84 (232)
-+.+.|+.+-. -. .|...+.+.-..-.-+. ..-..+..|.-|...++++.+....|++.++|..-..++..+. .
T Consensus 1175 Q~~G~Ll~tGd-~r-~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~ 1252 (1387)
T KOG1517|consen 1175 QQSGHLLVTGD-VR-SIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYRE 1252 (1387)
T ss_pred hhCCeEEecCC-ee-EEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecc
Confidence 35667776542 12 45555655322111111 1235677788888788999999999999999987666543332 2
Q ss_pred CCCC--ceEEEEeCCCCeE-EEEEcCCCCCcEEEEeCCCCCcEEEEEcC---CCC-CcceEEEeCCCCEEEEEECCCCcE
Q psy5751 85 DLVN--PRGIVVHPYYRKL-FWSDWNRSGPKIEWSNLDGTDREIFLKAA---DLK-LPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 85 ~~~~--p~~iavd~~~~~l-y~~d~~~~~~~I~~~~~~g~~~~~~~~~~---~~~-~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
.... ...+.+.+ +|.- .++.. ..+.|+..++.....+..+... +.. .-..|.++.. ..++=+-+ ...|
T Consensus 1253 h~~~~~Iv~~slq~-~G~~elvSgs--~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~h-apiiAsGs-~q~i 1327 (1387)
T KOG1517|consen 1253 HNDVEPIVHLSLQR-QGLGELVSGS--QDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEH-APIIASGS-AQLI 1327 (1387)
T ss_pred cCCcccceeEEeec-CCCcceeeec--cCCeEEEEecccCcccccceeeeccccCccceeeeeccC-CCeeeecC-cceE
Confidence 2222 45566664 3433 23332 2567888887774433333321 011 2567888886 45544433 3677
Q ss_pred EEEecCCCceEEEe-------cCCCceEEEEEE
Q psy5751 158 ECMTIRNRVRRKVY-------SNCTYPFGLSIT 183 (232)
Q Consensus 158 ~~~~~~g~~~~~~~-------~~~~~p~gla~~ 183 (232)
...+..|.....+. +...++..++++
T Consensus 1328 kIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FH 1360 (1387)
T KOG1517|consen 1328 KIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFH 1360 (1387)
T ss_pred EEEecChhhhcccccCcccccCcCCCcceeeec
Confidence 77788876544442 234445566665
No 323
>KOG0973|consensus
Probab=24.75 E-value=6.3e+02 Score=24.30 Aligned_cols=110 Identities=13% Similarity=-0.006 Sum_probs=61.8
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCC--------C---C-------CEEEEeCCCCCceEEEEeCCCCeEEEEE
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLND--------D---Q-------PKVIVSKDLVNPRGIVVHPYYRKLFWSD 105 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g--------~---~-------~~~~~~~~~~~p~~iavd~~~~~ly~~d 105 (232)
.....+.+.+.+..|+.. .....|++..... . . ...++..+-.+..+++-+| ++.++++-
T Consensus 70 ~sv~CVR~S~dG~~lAsG-SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~ 147 (942)
T KOG0973|consen 70 GSVNCVRFSPDGSYLASG-SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSV 147 (942)
T ss_pred CceeEEEECCCCCeEeec-cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEe
Confidence 455555566656666533 3334555555441 1 0 2233345666778888888 67777765
Q ss_pred cCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 106 WNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 106 ~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.. .++|...+.-.......+... ...+-|+++||.+.++ =+.+..+.|..
T Consensus 148 s~--DnsViiwn~~tF~~~~vl~~H-~s~VKGvs~DP~Gky~-ASqsdDrtikv 197 (942)
T KOG0973|consen 148 SL--DNSVIIWNAKTFELLKVLRGH-QSLVKGVSWDPIGKYF-ASQSDDRTLKV 197 (942)
T ss_pred cc--cceEEEEccccceeeeeeecc-cccccceEECCccCee-eeecCCceEEE
Confidence 43 345666655544444444443 6788999999985543 34444443333
No 324
>PF14517 Tachylectin: Tachylectin; PDB: 1TL2_A.
Probab=24.36 E-value=3.4e+02 Score=21.09 Aligned_cols=147 Identities=15% Similarity=0.061 Sum_probs=76.0
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEE--cCCCc----eeEEEeCC-CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAH--LDGKN----VEDVITTN-IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~--~~g~~----~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
|.+.+ ++.||...-. .+++.. ..+.+ ..+.+... -..-..|.+|+ ++.||-.+. .+.+++.......
T Consensus 39 i~~~P-~g~lY~I~~~---~lY~~~~~~~~~~~~~~~~~~Ig~g~W~~F~~i~~d~-~G~LYaV~~-~G~lyR~~~~~~~ 112 (229)
T PF14517_consen 39 IAAGP-NGRLYAIRND---GLYRGSPSSSGGNTWDSGSKQIGDGGWNSFKFIFFDP-TGVLYAVTP-DGKLYRHPRPTNG 112 (229)
T ss_dssp EEE-T-TS-EEEEETT---EEEEES---STT--HHHH-EEEE-S-GGG-SEEEE-T-TS-EEEEET-T-EEEEES---ST
T ss_pred EEEcC-CceEEEEECC---ceEEecCCccCcccccccCcccccCcccceeEEEecC-CccEEEecc-ccceeeccCCCcc
Confidence 45566 8899988733 688772 12221 12333333 34445899998 788996665 5788877543322
Q ss_pred --------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE-eCCCCC-----cEEEEEcCCCCCcceEEEeCC
Q psy5751 78 --------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS-NLDGTD-----REIFLKAADLKLPNSLAVDFR 143 (232)
Q Consensus 78 --------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~-~~~g~~-----~~~~~~~~~~~~p~~l~~d~~ 143 (232)
-+.+.....+....+..++ +|.||..+.+ +++++. ..++.. ...++....-..+.-|.+.+.
T Consensus 113 ~~~W~~~~~~~iG~~GW~~f~~vfa~~-~GvLY~i~~d---g~~~~~~~p~~~~~~W~~~s~~v~~~gw~~~~~i~~~~~ 188 (229)
T PF14517_consen 113 SDNWIGGSGKKIGGTGWNDFDAVFAGP-NGVLYAITPD---GRLYRRYRPDGGSDRWLSGSGLVGGGGWDSFHFIFFSPD 188 (229)
T ss_dssp T--HHH-HSEEEE-SSGGGEEEEEE-T-TS-EEEEETT---E-EEEE---SSTT--HHHH-EEEESSSGGGEEEEEE-TT
T ss_pred CcchhhccceecccCCCccceEEEeCC-CccEEEEcCC---CceEEeCCCCCCCCccccccceeccCCcccceEEeeCCC
Confidence 2444356777788899997 8999998854 357765 444443 234443321334556666665
Q ss_pred CCEEEEEECCCCcEEEEecC
Q psy5751 144 TDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 144 ~~~Ly~~d~~~~~i~~~~~~ 163 (232)
+.||.+ ...+.+++-..+
T Consensus 189 -g~L~~V-~~~G~lyr~~~p 206 (229)
T PF14517_consen 189 -GNLWAV-KSNGKLYRGRPP 206 (229)
T ss_dssp -S-EEEE--ETTEEEEES--
T ss_pred -CcEEEE-ecCCEEeccCCc
Confidence 888888 446778776554
No 325
>PF12216 m04gp34like: Immune evasion protein; InterPro: IPR022022 The proteins in this family are related to the m04 encoded protein gp34 of pathogenic microorganisms such as Murid herpesvirus 1. m06 and m152 genes are expressed earlier in the intracellular replication phases of these microorganism' life cycles. They function to inhibit MHC-1 loading and export. gp34 is theorized to prevent immune reactions from NK cells which would ordinarily recognise and attack cells lacking MHC.
Probab=24.07 E-value=2.6e+02 Score=22.42 Aligned_cols=23 Identities=13% Similarity=0.147 Sum_probs=19.6
Q ss_pred CCCcceEEEeCCCCEEEEEECCC
Q psy5751 132 LKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 132 ~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
...+.|+.+|+.+|+||+.....
T Consensus 134 ~~~~~Gf~Vd~~sG~L~i~snat 156 (272)
T PF12216_consen 134 VGNKDGFKVDPSSGNLYISSNAT 156 (272)
T ss_pred cCCCCCeEEcCCCceEEEecCcc
Confidence 45789999999999999997654
No 326
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=23.88 E-value=2.7e+02 Score=19.63 Aligned_cols=48 Identities=13% Similarity=0.121 Sum_probs=26.4
Q ss_pred EEeCCCCEEEEEEcCCCCcEEEEEcCCC--ceeEEEeCCC-CCccEEEEeec
Q psy5751 6 TVDCVEGQVYYSSVADKSSIKRAHLDGK--NVEDVITTNI-RSPEGLTFDWV 54 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~--~~~~~~~~~~-~~p~gl~~d~~ 54 (232)
-||...+.||++..++. .|+-+.+... ....+..... ..-.|+++-+.
T Consensus 17 ~yD~dt~llyl~gKGD~-~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lPK 67 (136)
T PF08954_consen 17 FYDEDTNLLYLAGKGDG-NIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLPK 67 (136)
T ss_dssp EE-TTT-EEEEEETT-S--EEEEEE-SSTTSEEEEEEE--SS--SEEEE--G
T ss_pred eEcCCCCEEEEEeccCc-EEEEEEEcCCCCceEEccccccCCCeEeeEecCc
Confidence 48999999999999888 8888888765 3333433322 23478887763
No 327
>KOG1897|consensus
Probab=23.75 E-value=6.8e+02 Score=24.29 Aligned_cols=130 Identities=14% Similarity=0.144 Sum_probs=71.0
Q ss_pred CCeEEEEeCCC-CCCEEEEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCc-ceEEEe
Q psy5751 65 MDTISMANLND-DQPKVIVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLP-NSLAVD 141 (232)
Q Consensus 65 ~~~I~~~~~~g-~~~~~~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p-~~l~~d 141 (232)
.|+|.+..++. +..+.+.+. --..|.++..- +|+|..+- +.+|..+.+... ++.-.... ...| ..|.+.
T Consensus 806 ~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f--ngkllA~I----n~~vrLye~t~~-~eLr~e~~-~~~~~~aL~l~ 877 (1096)
T KOG1897|consen 806 NGRIIVFEFEELNSLELVAETVVKGAVYALVEF--NGKLLAGI----NQSVRLYEWTTE-RELRIECN-ISNPIIALDLQ 877 (1096)
T ss_pred cceEEEEEEecCCceeeeeeeeeccceeehhhh--CCeEEEec----CcEEEEEEcccc-ceehhhhc-ccCCeEEEEEE
Confidence 57888877665 444455542 22356666655 77776554 223444444433 23333333 3344 466667
Q ss_pred CCCCEEEEEECCCC-cEEEEecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 142 FRTDELCWVDADSK-SLECMTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 142 ~~~~~Ly~~d~~~~-~i~~~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..++.++++|.... .+...+.+-+.-..++. ...+-..+++. ++....++. .+.+..+.++
T Consensus 878 v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~~d~ylgae~-~gNlf~v~~d 942 (1096)
T KOG1897|consen 878 VKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYLGAEN-SGNLFTVRKD 942 (1096)
T ss_pred ecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEecCceEEeecc-cccEEEEEec
Confidence 77899999998543 44444444444556665 34444566654 444444544 4555655554
No 328
>PRK13684 Ycf48-like protein; Provisional
Probab=23.23 E-value=4.2e+02 Score=21.71 Aligned_cols=164 Identities=9% Similarity=-0.027 Sum_probs=78.1
Q ss_pred CeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCC
Q psy5751 56 RVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKL 134 (232)
Q Consensus 56 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~ 134 (232)
+.+|++. ..+.|++.+-.|..=+.+.........++++++ ++.++.+.. .+.+++..-++.. -+.+.... ...
T Consensus 143 ~~~~~~g-~~G~i~~S~DgG~tW~~~~~~~~g~~~~i~~~~-~g~~v~~g~---~G~i~~s~~~gg~tW~~~~~~~-~~~ 216 (334)
T PRK13684 143 GTAEMAT-NVGAIYRTTDGGKNWEALVEDAAGVVRNLRRSP-DGKYVAVSS---RGNFYSTWEPGQTAWTPHQRNS-SRR 216 (334)
T ss_pred Ccceeee-ccceEEEECCCCCCceeCcCCCcceEEEEEECC-CCeEEEEeC---CceEEEEcCCCCCeEEEeeCCC-ccc
Confidence 3455443 446777776666543333332334567888887 444333332 3457765334432 22322222 456
Q ss_pred cceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEEe-c---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKVY-S---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~-~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
.+++++.+. +.+|.+-. .+.+.....|++.. +.+. . ......++++. ++.+|.+ ...+.+.+-...|+..+
T Consensus 217 l~~i~~~~~-g~~~~vg~-~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~~S~d~G~tW~ 293 (334)
T PRK13684 217 LQSMGFQPD-GNLWMLAR-GGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAG-GGNGTLLVSKDGGKTWE 293 (334)
T ss_pred ceeeeEcCC-CCEEEEec-CCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEE-cCCCeEEEeCCCCCCCe
Confidence 678888776 56666533 34443323444322 2221 1 11234566664 5555554 34455554443366666
Q ss_pred eEEeccCCcceeEEEEEEcC
Q psy5751 209 SIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 209 ~i~~~~~~~~~p~gi~~~~~ 228 (232)
.+..+...+..-+.+....+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~ 313 (334)
T PRK13684 294 KDPVGEEVPSNFYKIVFLDP 313 (334)
T ss_pred ECCcCCCCCcceEEEEEeCC
Confidence 54321112233445554443
No 329
>KOG1538|consensus
Probab=23.15 E-value=6.1e+02 Score=23.50 Aligned_cols=137 Identities=16% Similarity=0.091 Sum_probs=79.5
Q ss_pred EeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCC-----CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC
Q psy5751 61 TDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYY-----RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133 (232)
Q Consensus 61 ~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~-----~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~ 133 (232)
....++.|...+..|.....+-. .......+++..|.. ..|=+.||++. +.-..++|+.+..-- ....
T Consensus 149 lG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qT---LSFy~LsG~~Igk~r--~L~F 223 (1081)
T KOG1538|consen 149 LGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQT---LSFYQLSGKQIGKDR--ALNF 223 (1081)
T ss_pred EeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccce---eEEEEecceeecccc--cCCC
Confidence 34456777777776665544443 233445788887753 45667788753 556667776433111 1123
Q ss_pred CcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 134 LPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 134 ~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.|-.|..-+.+..+.+. ..++.+.-+.-+|-...++.+...+.+.+++. ++--|..-...+.|..+|.-
T Consensus 224 dP~CisYf~NGEy~LiG-Gsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 224 DPCCISYFTNGEYILLG-GSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred CchhheeccCCcEEEEc-cCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 45555555544444333 33444555555666666677777888888886 44444445566777777654
No 330
>PF14759 Reductase_C: Reductase C-terminal; PDB: 3FG2_P 3LXD_A 2YVG_A 2GR1_A 2GQW_A 2GR3_A 2YVF_A 1F3P_A 2GR0_A 2GR2_A ....
Probab=23.12 E-value=2e+02 Score=18.03 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=18.9
Q ss_pred EEEEEcCCCCcEEEEEcCCCceeEEEeCC
Q psy5751 14 VYYSSVADKSSIKRAHLDGKNVEDVITTN 42 (232)
Q Consensus 14 ly~~d~~~~~~i~~~~~~g~~~~~~~~~~ 42 (232)
.||+|..+. +|+.+-..+..-+.++...
T Consensus 1 ~FWSdQ~~~-~iq~~G~~~~~~~~v~rg~ 28 (85)
T PF14759_consen 1 WFWSDQYGV-RIQIAGLPGGADEVVVRGD 28 (85)
T ss_dssp EEEEEETTE-EEEEEE-STTSSEEEEEEE
T ss_pred CeecccCCC-eEEEEECCCCCCEEEEEcc
Confidence 389998888 8888887665544555443
No 331
>PF08268 FBA_3: F-box associated domain; InterPro: IPR013187 This domain occurs in a diverse superfamily of genes in plants. Most examples are found C-terminal to an F-box (IPR001810 from INTERPRO), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes []. Some members have two copies of this domain.
Probab=22.11 E-value=2.6e+02 Score=18.95 Aligned_cols=53 Identities=11% Similarity=0.192 Sum_probs=32.0
Q ss_pred eEEEeCCCCEEEEEECC----CCcEEEEecCCCceEEEec-----CCCceEEEEEECCEEEEEeC
Q psy5751 137 SLAVDFRTDELCWVDAD----SKSLECMTIRNRVRRKVYS-----NCTYPFGLSITDEKYYWTDW 192 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~----~~~i~~~~~~g~~~~~~~~-----~~~~p~gla~~~~~ly~td~ 192 (232)
|+.++ |-|||.... ...|.++|+...+-+.+.. .......|.-.+|+|-....
T Consensus 1 gicin---Gvly~~a~~~~~~~~~IvsFDv~~E~f~~i~~P~~~~~~~~~~~L~~~~G~L~~v~~ 62 (129)
T PF08268_consen 1 GICIN---GVLYWLAWSEDSDNNVIVSFDVRSEKFRFIKLPEDPYSSDCSSTLIEYKGKLALVSY 62 (129)
T ss_pred CEEEC---cEEEeEEEECCCCCcEEEEEEcCCceEEEEEeeeeeccccCccEEEEeCCeEEEEEe
Confidence 34454 889998543 5689999998776655522 12222345555777666543
No 332
>KOG1273|consensus
Probab=21.76 E-value=4.7e+02 Score=21.67 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=82.6
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
+++|.. +++..++...+. .|...++-... ...+.-. ....+..+.+.+++..++......-++.+++......+-
T Consensus 70 sl~WS~-dgr~LltsS~D~-si~lwDl~~gs~l~rirf~--spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp 145 (405)
T KOG1273|consen 70 SLCWSR-DGRKLLTSSRDW-SIKLWDLLKGSPLKRIRFD--SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLP 145 (405)
T ss_pred EEEecC-CCCEeeeecCCc-eeEEEeccCCCceeEEEcc--CccceeeeccccCCeEEEEEecCCcEEEEecCCceeecc
Confidence 677876 666667777777 77777775433 2223222 345777788878888887766666566666543322322
Q ss_pred eCC---CC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 83 SKD---LV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 83 ~~~---~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
... ++ .+.-...|+....+|.-.. .+++..++.+......-......++.-.|.+... ++-+..+.....|.
T Consensus 146 ~d~d~dln~sas~~~fdr~g~yIitGts---KGkllv~~a~t~e~vas~rits~~~IK~I~~s~~-g~~liiNtsDRvIR 221 (405)
T KOG1273|consen 146 KDDDGDLNSSASHGVFDRRGKYIITGTS---KGKLLVYDAETLECVASFRITSVQAIKQIIVSRK-GRFLIINTSDRVIR 221 (405)
T ss_pred CCCccccccccccccccCCCCEEEEecC---cceEEEEecchheeeeeeeechheeeeEEEEecc-CcEEEEecCCceEE
Confidence 211 11 2222346765555554442 4678777776553222111111234556777765 55555666555555
Q ss_pred EEec
Q psy5751 159 CMTI 162 (232)
Q Consensus 159 ~~~~ 162 (232)
..+.
T Consensus 222 ~ye~ 225 (405)
T KOG1273|consen 222 TYEI 225 (405)
T ss_pred EEeh
Confidence 5544
No 333
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=21.59 E-value=4.4e+02 Score=21.32 Aligned_cols=122 Identities=10% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-----------CCCCcceEEE--eCCCCEEEEEEC--
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-----------DLKLPNSLAV--DFRTDELCWVDA-- 152 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-----------~~~~p~~l~~--d~~~~~Ly~~d~-- 152 (232)
+.+++..+. .|.+.++.-. ...|+.++.....+.-.+..+ ...+...-.+ ....+.|=+=|.
T Consensus 145 HiNsV~~~~-~G~yLiS~R~--~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN~~ 221 (299)
T PF14269_consen 145 HINSVDKDD-DGDYLISSRN--TSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDNAN 221 (299)
T ss_pred EeeeeeecC-CccEEEEecc--cCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcCCC
Q ss_pred --------CCCcEEEEecCCCceEEEecCCCceEEEE---------EECCEEEEEeCCCCcEEEEeCCCCCcceEEe
Q psy5751 153 --------DSKSLECMTIRNRVRRKVYSNCTYPFGLS---------ITDEKYYWTDWKTNRIESANKEGERAPSIAL 212 (232)
Q Consensus 153 --------~~~~i~~~~~~g~~~~~~~~~~~~p~gla---------~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~ 212 (232)
..+++..+++.....+.+.+....|.++. +.+|+++++....+++.-++++|+.+..+.+
T Consensus 222 ~~~~~~~~s~~~v~~ld~~~~~~~~~~~~~~~~~~~~s~~~G~~Q~L~nGn~li~~g~~g~~~E~~~~G~vv~~~~f 298 (299)
T PF14269_consen 222 SDFNGTEPSRGLVLELDPETMTVTLVREYSDHPDGFYSPSQGSAQRLPNGNVLIGWGNNGRISEFTPDGEVVWEAQF 298 (299)
T ss_pred CCCCCCcCCCceEEEEECCCCEEEEEEEeecCCCcccccCCCcceECCCCCEEEecCCCceEEEECCCCCEEEEEEC
No 334
>KOG0271|consensus
Probab=21.11 E-value=5.2e+02 Score=21.99 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=40.4
Q ss_pred CCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 133 KLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 133 ~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
.-.|.+.|+|+ ++..-+-+-...|.-.+.+.++. ..+.......+-+|+- +-+|.++-+....+...+-....
T Consensus 368 ~lVn~V~fSPd-~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkK 442 (480)
T KOG0271|consen 368 ALVNHVSFSPD-GRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKK 442 (480)
T ss_pred hheeeEEECCC-ccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeee
Confidence 34578899997 34333334455555555554331 2222233445566763 55788877776666666555433
No 335
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=21.04 E-value=5.6e+02 Score=22.28 Aligned_cols=35 Identities=6% Similarity=0.073 Sum_probs=20.4
Q ss_pred EEEEecCCCceEEEecCCCceEEEE-EECCEEEEEe
Q psy5751 157 LECMTIRNRVRRKVYSNCTYPFGLS-ITDEKYYWTD 191 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~~~~~p~gla-~~~~~ly~td 191 (232)
|.++++..++.+.-+.....|.... +..++||++-
T Consensus 232 i~~vd~ksg~vens~~vvGn~~~~iYMskN~lYv~y 267 (603)
T COG4880 232 IAGVDLKSGNVENSAYVVGNPAAKIYMSKNRLYVVY 267 (603)
T ss_pred EEEEeccCCcccceEEEecCcceEEEEecCeEEEEE
Confidence 5567777666544433333454433 3578888874
No 336
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=20.83 E-value=6.6e+02 Score=23.09 Aligned_cols=117 Identities=11% Similarity=0.124 Sum_probs=62.9
Q ss_pred CCccEEEEeecCCeEEEEeCCC-C---eEEEEeCCCCCCEEEEeCCCCC-ceEEEEeCCCCeEEEEEcCC--CCCcEEEE
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQM-D---TISMANLNDDQPKVIVSKDLVN-PRGIVVHPYYRKLFWSDWNR--SGPKIEWS 116 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~-~---~I~~~~~~g~~~~~~~~~~~~~-p~~iavd~~~~~ly~~d~~~--~~~~I~~~ 116 (232)
....++++.+..+.+-|+-... . .|.+.++..... ....... --+++-...+..+|++.... ...++++.
T Consensus 129 ~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~---~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h 205 (682)
T COG1770 129 FSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEE---LPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRH 205 (682)
T ss_pred eeeeeeeeCCCCceEEEEEecccccEEEEEEEecccccc---cchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEE
Confidence 3456677777777776664332 2 344455543321 1111111 33556666678888885432 35688888
Q ss_pred eCCC--CCcEEEEEcCCCCCcceEEEeCCCCEEEEEE--CCCCcEEEEecC
Q psy5751 117 NLDG--TDREIFLKAADLKLPNSLAVDFRTDELCWVD--ADSKSLECMTIR 163 (232)
Q Consensus 117 ~~~g--~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d--~~~~~i~~~~~~ 163 (232)
.+.+ ..-+.+....+-..--++--...+..|+..- ..+++++..+.+
T Consensus 206 ~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~ 256 (682)
T COG1770 206 RLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDAD 256 (682)
T ss_pred ecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecC
Confidence 8887 5555555553223333444444445665553 234567777666
No 337
>KOG0307|consensus
Probab=20.35 E-value=8.1e+02 Score=23.92 Aligned_cols=157 Identities=10% Similarity=-0.001 Sum_probs=67.1
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-C---CCCCccEEEEeecCCeEEEEeCC---CCeEEEEeCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-T---NIRSPEGLTFDWVNRVLYWTDSQ---MDTISMANLNDD 76 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~---~~~~p~gl~~d~~~~~ly~~d~~---~~~I~~~~~~g~ 76 (232)
.++|+..-++++-+-...+ +....+++... .++. . +.....+|+.++..-.-.++-.. .-.|...|+.-.
T Consensus 166 ~lsWNrkvqhILAS~s~sg-~~~iWDlr~~~--pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~a 242 (1049)
T KOG0307|consen 166 CLSWNRKVSHILASGSPSG-RAVIWDLRKKK--PIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFA 242 (1049)
T ss_pred EeccchhhhHHhhccCCCC-CceeccccCCC--cccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeeccccc
Confidence 4455554455554443444 55556666442 1221 1 11224456665533322222222 123444443222
Q ss_pred C-CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCC
Q psy5751 77 Q-PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 77 ~-~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
. +..++..+-...-+|.-.+.+.+|..+-.. .++|+..+.+... ++..-. ...+--.+.+-+.+-.++=+.+-.
T Consensus 243 ssP~k~~~~H~~GilslsWc~~D~~lllSsgk--D~~ii~wN~~tgE--vl~~~p~~~nW~fdv~w~pr~P~~~A~asfd 318 (1049)
T KOG0307|consen 243 SSPLKILEGHQRGILSLSWCPQDPRLLLSSGK--DNRIICWNPNTGE--VLGELPAQGNWCFDVQWCPRNPSVMAAASFD 318 (1049)
T ss_pred CCchhhhcccccceeeeccCCCCchhhhcccC--CCCeeEecCCCce--EeeecCCCCcceeeeeecCCCcchhhhheec
Confidence 1 111222233334455555544344444322 4667777666532 222211 023344444444444444444446
Q ss_pred CcEEEEecCCCce
Q psy5751 155 KSLECMTIRNRVR 167 (232)
Q Consensus 155 ~~i~~~~~~g~~~ 167 (232)
++|....+.|...
T Consensus 319 gkI~I~sl~~~~~ 331 (1049)
T KOG0307|consen 319 GKISIYSLQGTDT 331 (1049)
T ss_pred cceeeeeeecCCc
Confidence 6677766666543
No 338
>COG4222 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.10 E-value=5.5e+02 Score=21.86 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=27.1
Q ss_pred CCcEEEEeCCCCCcEEEEEcCC------------CCCcceEEEeCCCCEEEEE
Q psy5751 110 GPKIEWSNLDGTDREIFLKAAD------------LKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 110 ~~~I~~~~~~g~~~~~~~~~~~------------~~~p~~l~~d~~~~~Ly~~ 150 (232)
.+-|++.+++|+..+.+..... -..-.+++++++..+||-.
T Consensus 165 gP~l~~f~~~Gk~~~~~~~~~~~~~~~~p~g~~~n~gfEglait~d~~~L~~~ 217 (391)
T COG4222 165 GPYLLEFDANGKLVRVLEVPVRFLPPDNPKGLRNNLGFEGLAITPDGKKLYAL 217 (391)
T ss_pred CcceEEECCCCccccccccccccCcCCCccccccccceeeEEecCCCceEEEE
Confidence 4568888888776554432110 1234589999998999877
No 339
>PTZ00486 apyrase Superfamily; Provisional
Probab=20.07 E-value=4.8e+02 Score=21.78 Aligned_cols=57 Identities=18% Similarity=0.200 Sum_probs=36.2
Q ss_pred CcceEEEeC---CCCEEEEEECCCCcEEEEecCCCc--eEEEec--CCCceEEE-----EEECCEEEEE
Q psy5751 134 LPNSLAVDF---RTDELCWVDADSKSLECMTIRNRV--RRKVYS--NCTYPFGL-----SITDEKYYWT 190 (232)
Q Consensus 134 ~p~~l~~d~---~~~~Ly~~d~~~~~i~~~~~~g~~--~~~~~~--~~~~p~gl-----a~~~~~ly~t 190 (232)
.-.|+.++. .+++||-.|-.++-|+++..++.+ ..+++. ......|+ ++-++.||+-
T Consensus 111 ~gRGmELSELv~FngkLys~DDrTGiVy~i~~~~~~~~PwvIL~dGdG~~~kGfK~EWaTVKd~~LyVG 179 (352)
T PTZ00486 111 GGRGMELSELVSFNGKLYGFDDRTGIVYEIDIDKKKAYPRHILSDGNGNSDKGMKIEWATVYDDKLYVG 179 (352)
T ss_pred CCCCcchhhhheeCCEEEEEeCCceEEEEEEcCCCcEeeEEEEecCCCCCCCCcceeeEEEECCEEEEe
Confidence 345665544 479999999999999999877643 344443 22223333 3457888883
No 340
>KOG0265|consensus
Probab=20.03 E-value=4.9e+02 Score=21.29 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=29.5
Q ss_pred cEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 112 KIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 112 ~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
.|...++......-++... .....+|++.+.+..| .+++....+.+.++.
T Consensus 197 ~ikvWd~r~~d~~~~lsGh-~DtIt~lsls~~gs~l-lsnsMd~tvrvwd~r 246 (338)
T KOG0265|consen 197 DIKVWDLRKNDGLYTLSGH-ADTITGLSLSRYGSFL-LSNSMDNTVRVWDVR 246 (338)
T ss_pred ceeeeccccCcceEEeecc-cCceeeEEeccCCCcc-ccccccceEEEEEec
Confidence 3555555333333333332 4456789998886665 566667777776665
Done!